BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022962
(289 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359491270|ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Vitis vinifera]
gi|297733841|emb|CBI15088.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/289 (72%), Positives = 243/289 (84%), Gaps = 4/289 (1%)
Query: 1 MLTWRCGVSVPIVFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLN 60
ML WR VP V P S T +K + +S F PHR KTLTTT+++NSS+FETLN
Sbjct: 1 MLVWRG--KVPGVSS-PLSVGTFVKQVTTSISTRFRPHRIATKTLTTTKVLNSSYFETLN 57
Query: 61 TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 120
Q++QI LYVDALLQWN+KMNLTAV +EVMERH+ DSLA+IPPI++SY +HCDSSCN
Sbjct: 58 PLQKQQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCN 117
Query: 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 180
N+ LVDVG+G GLPGL+LAIACP WK+TLLESMNKRC+FLEHAVSLT L NVQ+VRGRA
Sbjct: 118 -NISLVDVGSGPGLPGLILAIACPSWKITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRA 176
Query: 181 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 240
E LG+++ FRE +DVAVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDPQEEV+N+ERA+
Sbjct: 177 ENLGQNIGFREVFDVAVARAVAEMRILAEYCLPLVRVGGLFLAAKGHDPQEEVRNAERAI 236
Query: 241 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
QLMGAS+LQLCSVES SPFGQRTA+VCLK TP+KYPRDPGTP K PL
Sbjct: 237 QLMGASVLQLCSVESHSPFGQRTAIVCLKDCPTPRKYPRDPGTPVKSPL 285
>gi|224121638|ref|XP_002318633.1| predicted protein [Populus trichocarpa]
gi|222859306|gb|EEE96853.1| predicted protein [Populus trichocarpa]
Length = 288
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 242/292 (82%), Gaps = 7/292 (2%)
Query: 1 MLTWRCGVSVPIVFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIV---NSSHFE 57
ML WRC P P S T +KH F HR +AK+LT + NSS F+
Sbjct: 1 MLVWRCK---PPAVPFPLSLGTFVKHFSVIEPKAFPLHRIKAKSLTAAASIGTHNSSCFD 57
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+ + RQ++QI LYVD LLQWN+KMNLTAV DV+EVMERHI+DSLAI+PPI++SY SHC++
Sbjct: 58 SFSCRQKKQIRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNA 117
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S +S +KLVDVGTGAGLPGLVLAIACP WKVTLLESMNKRC FLEHA+S+T L NV++VR
Sbjct: 118 SIDS-IKLVDVGTGAGLPGLVLAIACPAWKVTLLESMNKRCDFLEHAISVTGLSNVEVVR 176
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE LG++VSFRE++DVAVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDPQEEV+N+E
Sbjct: 177 GRAENLGQNVSFREKFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPQEEVRNAE 236
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
R+++LMG+S LQLCSVES+SP+GQRTA++C K R TP+KYPRDPGTPAK+PL
Sbjct: 237 RSLKLMGSSTLQLCSVESRSPYGQRTAIICSKDRPTPRKYPRDPGTPAKLPL 288
>gi|449469503|ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Cucumis sativus]
gi|449527787|ref|XP_004170891.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Cucumis sativus]
Length = 281
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/278 (70%), Positives = 230/278 (82%), Gaps = 9/278 (3%)
Query: 18 FSARTLIKH---LPSSNQNTFCPHRTRAKTLTTTRIVNSS---HFETLNTRQQEQIHLYV 71
FS RT IK LP +F P RT K LT T NSS HFETL +RQ++Q+HL+V
Sbjct: 7 FSLRTFIKQFSPLPKRTPFSF-PIRTSFKRLTVT--CNSSRFLHFETLTSRQKDQVHLFV 63
Query: 72 DALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTG 131
DALLQWN+KMNLTA+ +VNEVMERH++DSLAIIPPI+N Y SHC +S ++KLVDVGTG
Sbjct: 64 DALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDVGTG 123
Query: 132 AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFRE 191
AGLPGL++AIACP+W+VTL+ESMNKRC+FLEHAV T L NVQ+VRGRAE LG D+S RE
Sbjct: 124 AGLPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLSLRE 183
Query: 192 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251
++DV VARAVAEMRILAEYCLP+VRVGGLF+AAKGHDP EV N+E+A+++MGASLLQ+C
Sbjct: 184 KFDVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQIC 243
Query: 252 SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VES SP+GQRTAVVC K R TP+KYPRDPGTPAK PL
Sbjct: 244 PVESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKSPL 281
>gi|255540789|ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
gi|223550574|gb|EEF52061.1| Methyltransferase gidB, putative [Ricinus communis]
Length = 282
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/282 (68%), Positives = 231/282 (81%), Gaps = 5/282 (1%)
Query: 1 MLTWRCGVSVPIVFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLN 60
ML C ++VP L FS + LP + P R AK LT T I +S FE+LN
Sbjct: 1 MLVRLCRINVP----LCFSVGNFTERLPVAKLKASSPRRINAKALTATAIHTTSCFESLN 56
Query: 61 TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN 120
+RQ+EQI YVDALL+WN+KMNLTAV + NEVM RHI+DSLA++ PI+ SY SHC SS +
Sbjct: 57 SRQKEQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAMLTPIRKSYISHCSSSID 116
Query: 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 180
NLKLVDVGTG GLPGL+LAIACP WKVTLLESMNKRCVFLEHAV++T L NV+++RGRA
Sbjct: 117 -NLKLVDVGTGPGLPGLILAIACPGWKVTLLESMNKRCVFLEHAVNVTGLSNVEVLRGRA 175
Query: 181 ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 240
E+LG++ SFREQ+DVAVARAVAEMR+LAEYCLPLVRVGGLF+AAKGHDPQEEV+N+ER++
Sbjct: 176 ESLGQNDSFREQFDVAVARAVAEMRVLAEYCLPLVRVGGLFIAAKGHDPQEEVRNAERSI 235
Query: 241 QLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 282
QLMGAS+LQLCSVES SP+GQRTA++ +K R TP+KYPRDPG
Sbjct: 236 QLMGASVLQLCSVESHSPYGQRTAIISVKDRPTPRKYPRDPG 277
>gi|356512958|ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Glycine max]
Length = 274
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/275 (66%), Positives = 223/275 (81%), Gaps = 7/275 (2%)
Query: 15 HLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLNTRQQEQIHLYVDAL 74
+L FS T KHL + + P + K++ T SHF L +RQ++QIHLYV+ L
Sbjct: 7 NLQFSRWTFFKHL-TPRKFKLAPPLCQHKSVATL-----SHFGILTSRQKDQIHLYVETL 60
Query: 75 LQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGL 134
LQWN++MNLTAV++VNEVMERH++DSLAI+PP+ + Y SHC +SC+ L LVDVGTGAGL
Sbjct: 61 LQWNKRMNLTAVREVNEVMERHVEDSLAILPPLSDCYRSHCSASCD-KLSLVDVGTGAGL 119
Query: 135 PGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 194
PG+VLAIA P+W VTL+ESMNKRCVFLEH V + N++IVRGRAE+LG++ FREQ+D
Sbjct: 120 PGVVLAIARPEWDVTLMESMNKRCVFLEHVVGVIGSSNIKIVRGRAESLGQNPCFREQFD 179
Query: 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 254
+AVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDP++E+K +E A+Q +GASLLQ+CSVE
Sbjct: 180 IAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGASLLQVCSVE 239
Query: 255 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
SQSP+GQRTAVVC K R TP KYPRDPGTPAK PL
Sbjct: 240 SQSPYGQRTAVVCSKDRPTPMKYPRDPGTPAKEPL 274
>gi|357477267|ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
truncatula]
gi|355509974|gb|AES91116.1| Ribosomal RNA small subunit methyltransferase G [Medicago
truncatula]
Length = 518
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/275 (65%), Positives = 221/275 (80%), Gaps = 10/275 (3%)
Query: 15 HLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLNTRQQEQIHLYVDAL 74
+L FS T KHL T C + + + N SHF TL +RQ++QIHLYVD L
Sbjct: 241 NLQFSRWTFFKHLTPRKYTTLCQNNSTS---------NLSHFLTLTSRQKDQIHLYVDTL 291
Query: 75 LQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGL 134
LQWN++MNLTAVK+VNEVMERHI+DSLAI+PP+ ++Y SH S + +KLVDVGTGAGL
Sbjct: 292 LQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLSDNYMSHSSKSID-KVKLVDVGTGAGL 350
Query: 135 PGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 194
PG+VLAIA PDW VTL+ESMNKRCVFLEH V + N+QIVRGRAE+LG+++ +RE++D
Sbjct: 351 PGVVLAIARPDWDVTLMESMNKRCVFLEHVVGVIGSSNLQIVRGRAESLGQNLCYREKFD 410
Query: 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 254
+AVARAVAE R+LAEYCLPLVRVGG+F+AAKGHDP++EVK +E A++ MGASLLQ+CSVE
Sbjct: 411 IAVARAVAETRVLAEYCLPLVRVGGMFIAAKGHDPEDEVKKAENAIKKMGASLLQVCSVE 470
Query: 255 SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
SQSP+GQRTAV+CLK R TP KYPR PGTP+K PL
Sbjct: 471 SQSPYGQRTAVICLKDRPTPMKYPRFPGTPSKEPL 505
>gi|240256423|ref|NP_568720.4| glucose inhibited division protein B [Arabidopsis thaliana]
gi|332008514|gb|AED95897.1| glucose inhibited division protein B [Arabidopsis thaliana]
Length = 292
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 218/268 (81%), Gaps = 2/268 (0%)
Query: 23 LIKHLPSSNQNTFCPHRTRAKTLTTTRI-VNSSHFETLNTRQQEQIHLYVDALLQWNRKM 81
LIKHLP + +TF R K L+ + +S F+TL++ QQ+QIHLYVD LLQWN+KM
Sbjct: 26 LIKHLPCTKSHTFLRRRFHYKALSNATVSTTASCFKTLSSSQQDQIHLYVDTLLQWNQKM 85
Query: 82 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 141
NLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLVLAI
Sbjct: 86 NLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLAI 144
Query: 142 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201
ACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+ARAV
Sbjct: 145 ACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAV 204
Query: 202 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 261
AEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP+GQ
Sbjct: 205 AEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYGQ 264
Query: 262 RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RT VVC K TP+KYPR+ GTPAK+PL
Sbjct: 265 RTTVVCRKDHSTPQKYPREAGTPAKLPL 292
>gi|10177222|dbj|BAB10297.1| unnamed protein product [Arabidopsis thaliana]
Length = 329
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 171/263 (65%), Positives = 211/263 (80%), Gaps = 2/263 (0%)
Query: 23 LIKHLPSSNQNTFCPHRTRAKTLTTTRI-VNSSHFETLNTRQQEQIHLYVDALLQWNRKM 81
LIKHLP + +TF R K L+ + +S F+TL++ QQ+QIHLYVD LLQWN+KM
Sbjct: 26 LIKHLPCTKSHTFLRRRFHYKALSNATVSTTASCFKTLSSSQQDQIHLYVDTLLQWNQKM 85
Query: 82 NLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 141
NLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLVLAI
Sbjct: 86 NLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLAI 144
Query: 142 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201
ACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+ARAV
Sbjct: 145 ACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAV 204
Query: 202 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 261
AEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP+GQ
Sbjct: 205 AEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYGQ 264
Query: 262 RTAVVCLKSRRTPKKYPRDPGTP 284
RT VVC K TP+KYPR+ P
Sbjct: 265 RTTVVCRKDHSTPQKYPREAEDP 287
>gi|356565039|ref|XP_003550752.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA small subunit
methyltransferase G-like [Glycine max]
Length = 263
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/280 (62%), Positives = 212/280 (75%), Gaps = 18/280 (6%)
Query: 10 VPIVFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLNTRQQEQIHL 69
+P +L FS T KHL + + P + K+L T SHF TL +RQ++QIHL
Sbjct: 2 LPSTSNLKFSRWTFFKHL-TPRKFKLTPPLCQHKSLATL-----SHFGTLTSRQKDQIHL 55
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
YV+ LLQWN++MNLTAV++VNE MERH++DS HC +SCN L LVDVG
Sbjct: 56 YVETLLQWNKRMNLTAVREVNEGMERHVEDS-----------AXHCGASCN-KLSLVDVG 103
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAGLPG+VLAI P+W VTL+ESMNKRCVFLEH V + N+QIVRGRAE+LG+D F
Sbjct: 104 TGAGLPGIVLAITRPEWDVTLMESMNKRCVFLEHVVGVIGSSNIQIVRGRAESLGQDPCF 163
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
REQ+DVAVARAVAEMRILAEYCLPLVRVGGLF+AAKGHDP++E+K +E A+Q +GASLLQ
Sbjct: 164 REQFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGASLLQ 223
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+CSVESQSP+GQRTAV+C K R TP KYPRDP PAK P+
Sbjct: 224 VCSVESQSPYGQRTAVICSKDRPTPIKYPRDPCAPAKEPM 263
>gi|148907902|gb|ABR17072.1| unknown [Picea sitchensis]
Length = 301
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/238 (62%), Positives = 196/238 (82%)
Query: 52 NSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSY 111
N +TL+ +QQEQ L+V+ LL+WN++MNLTAV + VMERH++DSLA++P I+N+Y
Sbjct: 64 NPRLLDTLSMKQQEQTSLFVNTLLEWNQRMNLTAVTEHCAVMERHVEDSLALLPIIENAY 123
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
++C + + L LVDVG+GAGLPG++LAIA PDW++TL+ES+ KRC FLEH V ++ L
Sbjct: 124 KNNCPTMESVRLNLVDVGSGAGLPGIILAIARPDWQITLIESLQKRCFFLEHVVDVSGLS 183
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
N Q+VR RAE G++ FRE+YD+AVARAVA+MRILAEYCLPLVRVGGL VAAKG++PQE
Sbjct: 184 NAQVVRIRAEDAGQNPDFREKYDIAVARAVADMRILAEYCLPLVRVGGLLVAAKGYNPQE 243
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EV+N+++A++LMGAS+LQLCSV S+ P+G+RTAV+CLK+R TP KYPR PG P K PL
Sbjct: 244 EVENAKKAIRLMGASMLQLCSVTSEGPYGKRTAVLCLKNRPTPPKYPRHPGIPTKKPL 301
>gi|90568008|gb|ABD94074.1| At5g50110 [Arabidopsis thaliana]
Length = 208
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 178/209 (85%), Gaps = 1/209 (0%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTA K+ +EVMERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLVLA
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLA 59
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IACPDW+VTLLES+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+ARA
Sbjct: 60 IACPDWRVTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARA 119
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VAEMR+LAEYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP+G
Sbjct: 120 VAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYG 179
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
QRT VVC K TP+KYPR+ GTPAK+PL
Sbjct: 180 QRTTVVCRKDHSTPQKYPREAGTPAKLPL 208
>gi|297792303|ref|XP_002864036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309871|gb|EFH40295.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 179/209 (85%), Gaps = 1/209 (0%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTA K+ +EVMERHI+DSLAI+PP+K Y H + + ++ LVDVG+GAGLPGLVLA
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPLKACYNLHSNDLFD-HINLVDVGSGAGLPGLVLA 59
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IACPDW+VTLLES+NKRC+FLEH V++T L NV+IVRGRAE+ G DV +RE++DVA+ARA
Sbjct: 60 IACPDWRVTLLESINKRCIFLEHVVNVTGLTNVKIVRGRAESCGHDVMYREKFDVAIARA 119
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VAEMR+L EYCLPLVR+GGLFVAAKGHDP+EEV+N+E AV+++G S+LQ+ V+S SP+G
Sbjct: 120 VAEMRVLVEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRMLGGSILQISPVDSHSPYG 179
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
QRT VVC K TP+KYPR+ GTP+K+PL
Sbjct: 180 QRTTVVCRKDHSTPQKYPREAGTPSKLPL 208
>gi|326512668|dbj|BAJ99689.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/238 (62%), Positives = 181/238 (76%), Gaps = 2/238 (0%)
Query: 52 NSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSY 111
SS +L+ +QQ Q+ LYVD LL WN++MNLT V D EVM RH+ DSLA++PP++ +Y
Sbjct: 41 GSSSTTSLSPQQQRQVSLYVDVLLDWNQRMNLTTVTDEAEVMTRHVVDSLAVLPPLERAY 100
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
TS S + LVDVG+GAGLPGL+LA+A P WK TLLESM KRC FLEHAV + L
Sbjct: 101 TSRGGDI--SGISLVDVGSGAGLPGLILAVARPSWKFTLLESMRKRCTFLEHAVEVMGLS 158
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
NV +V RAE G++ RE +DVA ARAVAE++ILAEYCLPLVRVGGLF+AAKGHDP E
Sbjct: 159 NVDVVCDRAENAGQNHDLRESFDVAAARAVAELKILAEYCLPLVRVGGLFIAAKGHDPHE 218
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E+++++ AV +GAS+L LCSVES P GQRTAVV LK R TPKKYPR PGTP+K PL
Sbjct: 219 EIRSAKAAVGKLGASMLDLCSVESIGPHGQRTAVVYLKERTTPKKYPRQPGTPSKTPL 276
>gi|357124667|ref|XP_003564019.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
[Brachypodium distachyon]
Length = 280
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 182/233 (78%), Gaps = 2/233 (0%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ QQ Q+ LYVDALL WN++MNLTAV D EVM RH++DSLA++PP++ +Y + S
Sbjct: 48 LSPAQQRQVTLYVDALLDWNQRMNLTAVTDEAEVMTRHVEDSLAVLPPLERAYRAQSTSH 107
Query: 119 CN--SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+ L+DVG+GAGLPGL+LA+A P WK+TLLESM KRC FLEHAV + +L NV ++
Sbjct: 108 GGDMGGISLIDVGSGAGLPGLILAVARPSWKITLLESMRKRCTFLEHAVEVMELSNVDVL 167
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE +G+ FRE +DVA ARAVAE++ILAEYCLPLVRVGGLF+AAKGHDP +E++N+
Sbjct: 168 CDRAENVGQSHDFREAFDVAAARAVAELKILAEYCLPLVRVGGLFIAAKGHDPHDEIRNA 227
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ AV +GAS+L LC+VES P GQRTAVV LK R TP++YPR PGTP+K PL
Sbjct: 228 KAAVHTLGASMLDLCTVESMGPHGQRTAVVYLKERGTPRRYPRHPGTPSKTPL 280
>gi|413944193|gb|AFW76842.1| hypothetical protein ZEAMMB73_606720 [Zea mays]
Length = 285
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 181/233 (77%), Gaps = 2/233 (0%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ QQ QI +YVD LL+WN++MNLTAV D EVM RH+ DSLA++PP++ Y S+
Sbjct: 53 LSPPQQRQITVYVDTLLEWNQRMNLTAVTDEAEVMARHVADSLAMLPPLERVYRGRSTSA 112
Query: 119 CNS--NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+ ++L+DVG+GAGLPGL+LA+A P WK TLLESM KRC FLEHAV L NV +V
Sbjct: 113 GGAIDGVRLIDVGSGAGLPGLILAVARPSWKFTLLESMRKRCTFLEHAVEAMNLSNVDVV 172
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE +G+ + FRE YD+ ARAVAE+++LAEYC+PLVR+GGLF+AAKGHDP EEV+N+
Sbjct: 173 CDRAEKVGQSLDFRESYDIVAARAVAELKVLAEYCIPLVRIGGLFIAAKGHDPHEEVRNA 232
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E A++ +GAS+L+LC+VES P GQRTAV+ +K R TPKKYPR PGTP+K PL
Sbjct: 233 EGAIKKLGASMLELCNVESMGPHGQRTAVLYVKERATPKKYPRLPGTPSKAPL 285
>gi|21618112|gb|AAM67162.1| glucose-inhibited division protein B-like protein [Arabidopsis
thaliana]
Length = 196
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/197 (70%), Positives = 168/197 (85%), Gaps = 1/197 (0%)
Query: 93 MERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLE 152
MERHI+DSLAI+PPIK Y H S ++ L+DVG+GAGLPGLVLAIACPDW+VTLLE
Sbjct: 1 MERHIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLAIACPDWRVTLLE 59
Query: 153 SMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCL 212
S+NKRCVFLEH V++T L NV IVRGRAE+ G DV +RE++DVA+ARAVAEMR+LAEYCL
Sbjct: 60 SINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCL 119
Query: 213 PLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRR 272
PLVR+GGLFVAAKGHDP+EEV+N+E AV+L+G S+LQ+ V+S SP+GQRT VVC K
Sbjct: 120 PLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGGSILQISPVDSHSPYGQRTTVVCRKDHS 179
Query: 273 TPKKYPRDPGTPAKVPL 289
TP+KYPR+ GTPAK+PL
Sbjct: 180 TPQKYPREAGTPAKLPL 196
>gi|226491241|ref|NP_001144818.1| uncharacterized protein LOC100277897 [Zea mays]
gi|195647450|gb|ACG43193.1| hypothetical protein [Zea mays]
Length = 285
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/233 (59%), Positives = 177/233 (75%), Gaps = 2/233 (0%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ QQ QI +YVD LL+WN++MNLTA D EVM RH+ DSLA++PP++ Y S+
Sbjct: 53 LSPPQQRQITVYVDTLLEWNQRMNLTAXTDEAEVMARHVADSLAMLPPLERVYRGRSTSA 112
Query: 119 CNS--NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+ ++L+DVG+GAGLPGL+LA+A P WK TLLESM RC FLEHAV L NV +V
Sbjct: 113 GGAIDGVRLIDVGSGAGLPGLILAVARPSWKFTLLESMRXRCTFLEHAVEXMNLSNVDVV 172
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE +G+ FRE YD+ ARAV E+++LAEYC+PLVR+GGLF+AAKGHDP EEV+N+
Sbjct: 173 CDRAEKVGQSXDFRESYDIVAARAVXELKVLAEYCIPLVRIGGLFIAAKGHDPHEEVRNA 232
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E A++ +GAS+L+LC+VES P GQRTAV+ +K R TPKKYPR PGTP+K PL
Sbjct: 233 EGAIKKLGASMLELCNVESMGPHGQRTAVLYVKERATPKKYPRLPGTPSKAPL 285
>gi|125596647|gb|EAZ36427.1| hypothetical protein OsJ_20757 [Oryza sativa Japonica Group]
Length = 295
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/226 (61%), Positives = 174/226 (76%), Gaps = 5/226 (2%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ QQ Q+ LYVDALL WN++MNLTAV D EVM RH+ DSLA++PP++ +Y
Sbjct: 64 LSPSQQRQVSLYVDALLDWNQRMNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDL--- 120
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++LVDVG+GAGLPGL+LA+A P WK TLLESM KRC+FLEHAV + L NV +V
Sbjct: 121 --GGMRLVDVGSGAGLPGLILAVARPSWKFTLLESMQKRCLFLEHAVEVMGLSNVDVVCD 178
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+ FRE +DVAVARAVAE+++LAEYCLPLVR+ GLF+AAKGH+P EE+KN++
Sbjct: 179 RAENVGQSPDFREAFDVAVARAVAELKVLAEYCLPLVRIDGLFIAAKGHNPHEEIKNAKS 238
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTP 284
AV +GAS+L++C VES P GQRTAVV +K TPKKYPR PGTP
Sbjct: 239 AVHKLGASMLEICDVESMGPHGQRTAVVYIKECITPKKYPRHPGTP 284
>gi|413944192|gb|AFW76841.1| hypothetical protein ZEAMMB73_606720 [Zea mays]
Length = 282
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/239 (56%), Positives = 174/239 (72%), Gaps = 17/239 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ QQ QI +YVD LL+WN++MNLTAV D EVM RH+ DSLA++PP++ Y S+
Sbjct: 53 LSPPQQRQITVYVDTLLEWNQRMNLTAVTDEAEVMARHVADSLAMLPPLERVYRGRSTSA 112
Query: 119 CNS--NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+ ++L+DVG+GAGLPG WK TLLESM KRC FLEHAV L NV +V
Sbjct: 113 GGAIDGVRLIDVGSGAGLPG---------WKFTLLESMRKRCTFLEHAVEAMNLSNVDVV 163
Query: 177 RGRAE------TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
RAE +G+ + FRE YD+ ARAVAE+++LAEYC+PLVR+GGLF+AAKGHDP
Sbjct: 164 CDRAEKNLSGQKVGQSLDFRESYDIVAARAVAELKVLAEYCIPLVRIGGLFIAAKGHDPH 223
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EEV+N+E A++ +GAS+L+LC+VES P GQRTAV+ +K R TPKKYPR PGTP+K PL
Sbjct: 224 EEVRNAEGAIKKLGASMLELCNVESMGPHGQRTAVLYVKERATPKKYPRLPGTPSKAPL 282
>gi|302825464|ref|XP_002994346.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
gi|300137758|gb|EFJ04589.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
Length = 272
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 171/232 (73%), Gaps = 5/232 (2%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ Q + + Y+D LL WN++MNLT+V D EVMERHI DSL+++P I+ HC
Sbjct: 36 ALDPSQSKLVSAYIDKLLDWNQRMNLTSVTDRKEVMERHIRDSLSLLPVIEK----HCSL 91
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S + +LK+VD+G+GAGLPG++ IA P WK+TL+ES+ K+C FLE AV L NV +VR
Sbjct: 92 S-DGSLKVVDIGSGAGLPGIIFGIARPSWKITLIESIQKKCDFLEDAVLAVSLQNVSVVR 150
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+DV FRE +DVAVARAVAEMR+LAE CLP V GG+ VAAKG +P+EEVK++E
Sbjct: 151 ARAEEKGRDVEFRETFDVAVARAVAEMRVLAELCLPFVAAGGIMVAAKGANPEEEVKSAE 210
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G S + V+S+SPFG RTAVVCLK+ TP+KYPR PG P+K PL
Sbjct: 211 EAITLLGGSCANIIEVDSESPFGTRTAVVCLKATPTPEKYPRRPGAPSKRPL 262
>gi|302800848|ref|XP_002982181.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
gi|300150197|gb|EFJ16849.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
Length = 225
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 167/227 (73%), Gaps = 5/227 (2%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ Q + + Y+D LL WN++MNLT+V D E+MERHI DSL+++P I+ HC
Sbjct: 4 ALDPSQSKLVSAYIDKLLVWNQRMNLTSVTDRKEMMERHIRDSLSLLPVIEK----HCSL 59
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S + NLK+VD+G+GAGLPG++ IA P+WK+TL+ES+ K+C FLE AV L NV +VR
Sbjct: 60 S-DGNLKVVDIGSGAGLPGIIFGIARPNWKITLIESIQKKCDFLEDAVLAVSLQNVSVVR 118
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+D FRE +DVAVARAVAEMR+LAE CLP V GG+ VAAKG +P+EEVK++E
Sbjct: 119 ARAEEKGRDAEFRETFDVAVARAVAEMRVLAELCLPFVAAGGIMVAAKGANPEEEVKSAE 178
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTP 284
A+ L+G S + V+S+SPFG RTAVVCLK+ TP+KYPR PG P
Sbjct: 179 EAITLLGGSCANIIEVDSESPFGTRTAVVCLKATPTPEKYPRRPGAP 225
>gi|125554703|gb|EAZ00309.1| hypothetical protein OsI_22326 [Oryza sativa Indica Group]
Length = 210
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 157/204 (76%), Gaps = 5/204 (2%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTAV D EVM RH+ DSLA++PP++ +Y ++LVDVG+GAGLPGL+LA
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDL-----GGMRLVDVGSGAGLPGLILA 55
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
+A P WK TLLESM KRC+FLEHAV + L NV +V RAE +G+ FRE +DVAVARA
Sbjct: 56 VARPSWKFTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAFDVAVARA 115
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VAE+++LAEYCLPLVR+ GLF+AAKGH+P EE+KN++ AV +GAS+L++C VES P G
Sbjct: 116 VAELKVLAEYCLPLVRIDGLFIAAKGHNPHEEIKNAKSAVHKLGASMLEICDVESMGPHG 175
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTP 284
QRTAVV +K TPKKYPR PGTP
Sbjct: 176 QRTAVVYIKECITPKKYPRHPGTP 199
>gi|168063930|ref|XP_001783920.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664550|gb|EDQ51265.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 161/209 (77%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTAV + +M+RHI DSL+++P I+ ++ ++C SS ++K+VD+G+GAGLPG+VLA
Sbjct: 1 MNLTAVTERGAMMDRHIADSLSLLPIIEGAHAAYCKSSAGESIKVVDIGSGAGLPGIVLA 60
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IA P W++TLLES+ KRC FLE A L NV+++R RAE GKD + RE YD+AVARA
Sbjct: 61 IARPAWQLTLLESLQKRCDFLERAAEAAGLTNVKVLRSRAEDAGKDSTHREMYDIAVARA 120
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VAEMRILAE CLPLVRVGG+ VAAKG +P+EEV+ ++ AV L+GAS++ L V+S+ P G
Sbjct: 121 VAEMRILAELCLPLVRVGGILVAAKGPNPEEEVEAAKTAVDLLGASIITLSKVDSEGPLG 180
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
QRTAVVCLK + TP KYPR G P K PL
Sbjct: 181 QRTAVVCLKDKPTPAKYPRRAGMPNKRPL 209
>gi|424513487|emb|CCO66109.1| predicted protein [Bathycoccus prasinos]
Length = 755
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 47 TTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP 106
+ R + S L+ Q +Q+ +Y LL+WN+KMNLT K N+V+ERH+ DSL+II
Sbjct: 513 SEREIVESQLNALSDSQMKQVKIYSSLLLEWNQKMNLTGAKTENDVLERHVADSLSIIEA 572
Query: 107 IKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVS 166
I+N+ + D+S K++DVGTGAG PG+VLAIA P W+++LL+S+ KR FL+H
Sbjct: 573 IENTCPNSKDTS--KPFKIIDVGTGAGFPGMVLAIARPHWEISLLDSLQKRTKFLDHVAD 630
Query: 167 LTQLLNVQIVRGRAETLGK-DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK 225
+ NV+ + RAE GK + REQ+DVA ARAVA++R+L+E C+P V+VGG ++A K
Sbjct: 631 SAGIKNVKTIWSRAEDAGKFESEHREQFDVATARAVADLRLLSELCIPFVKVGGAWIAMK 690
Query: 226 GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTP 284
EE++++ +AV+++G + V+S P G RT V K T KKYPR GTP
Sbjct: 691 NQSGLEEIESASKAVEILGGEAMSYQEVQSIGPDGNLRTVVTSYKLTETDKKYPRRAGTP 750
Query: 285 AKVPL 289
K PL
Sbjct: 751 QKKPL 755
>gi|125974848|ref|YP_001038758.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|256003895|ref|ZP_05428882.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281418697|ref|ZP_06249716.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|385780290|ref|YP_005689455.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
gi|419721184|ref|ZP_14248375.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum AD2]
gi|419726580|ref|ZP_14253602.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum YS]
gi|189039498|sp|A3DHY6.1|RSMG_CLOTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125715073|gb|ABN53565.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|255992233|gb|EEU02328.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281407781|gb|EFB38040.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|316941970|gb|ADU76004.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
gi|380770177|gb|EIC04075.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum YS]
gi|380782884|gb|EIC12491.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
thermocellum AD2]
Length = 242
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 146/234 (62%), Gaps = 16/234 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ Q ++ Y D L +WN+KMNLTA++D E++ +H DS++I P IK+
Sbjct: 22 NLDDEQIDKFFAYKDVLKEWNQKMNLTAIEDDEEIILKHFIDSISICPIIKDK------- 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
NL L+DVGTGAG PG+ + I P+ KV LL+S+ KR FL + L ++ V
Sbjct: 75 ----NLALIDVGTGAGFPGIPVKIVFPELKVKLLDSLEKRTKFLNEVIERLDLKDISTVH 130
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G D +RE+YD++VARAVA + +L EYCLP V+VGG F+A KG+ EEV+NS+
Sbjct: 131 ARAEEKGVDPDYREKYDISVARAVASLPVLLEYCLPFVKVGGCFIAMKGN-STEEVENSK 189
Query: 238 RAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G + + +E PF +R +V K R+TP KYPR G P+K PL
Sbjct: 190 KALEILGGKIEDI--LEFNLPFSDIKRNVIVIKKFRQTPTKYPRKSGKPSKNPL 241
>gi|387928244|ref|ZP_10130922.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus PB1]
gi|387587830|gb|EIJ80152.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus PB1]
Length = 238
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 141/232 (60%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q +Q Y L++WN KMNLTA+ + NEV +H DS+ S + D
Sbjct: 16 SLSQQQLDQYETYYLTLVEWNEKMNLTAITEKNEVYLKHFYDSI--------SAAFYFD- 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L++ DVG GAG P + L IA PD VT+++S+NKR FLEH + QL NVQ +
Sbjct: 67 -FEKPLRVCDVGAGAGFPSIPLKIAFPDLHVTIVDSLNKRITFLEHLGEVLQLKNVQFIH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YDV ARAVA+M +L+E CLPLV++ G F+A KG EE++ ++
Sbjct: 126 DRAETFGQKKEHRESYDVVTARAVAKMSVLSELCLPLVKLSGTFIAMKGASANEELEAAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G SL + S +R ++ K ++TPKKYPR PGTP K P+
Sbjct: 186 KAISVLGGSLQSVHSFRLPLEESERNILIIKKEKQTPKKYPRKPGTPNKTPI 237
>gi|336394163|ref|ZP_08575562.1| 16S rRNA methyltransferase GidB [Lactobacillus farciminis KCTC
3681]
Length = 241
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 141/232 (60%), Gaps = 10/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y L++ N+ MNLT++ D ++V +H DS+ + D
Sbjct: 17 LSETQKDQFATYFKELVETNKVMNLTSITDEDQVYLKHFYDSIEL---------GFVDKK 67
Query: 119 CNSN-LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S+ L L DVG+GAG P L L I P K+T+++S+NKR FL+ V+ L +V +V
Sbjct: 68 ILSDELTLCDVGSGAGFPSLPLKIVNPKLKITIVDSLNKRIKFLDSLVNKLGLEDVNLVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +GK+ FREQ+DV ARAVA M +L E+CLPLV+VGG FVA K EEVK +E
Sbjct: 128 GRAEEVGKNAQFREQFDVVTARAVAAMNVLTEFCLPLVKVGGQFVAMKSEKAPEEVKAAE 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + Q SVE + G R + K +TPKKYPR PGTPAK PL
Sbjct: 188 FAIETLGGEIKQQTSVELPNDAGIRNFIFVGKVNKTPKKYPRKPGTPAKKPL 239
>gi|384246799|gb|EIE20288.1| methyltransferase GidB [Coccomyxa subellipsoidea C-169]
Length = 241
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 142/206 (68%), Gaps = 8/206 (3%)
Query: 87 KDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDW 146
KD +E +++HI+DSLA++PPI D NL+++DVG+GAG PG+++AI P+W
Sbjct: 41 KDRDEAVQKHINDSLALLPPIDTVAAGLPDQ----NLRVIDVGSGAGFPGVIIAITRPEW 96
Query: 147 KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRI 206
+VT+L+S+ KRC F+E + + NV+++ GRAET G+D RE+Y +AVARAVAEMR+
Sbjct: 97 QVTVLDSLKKRCDFVEATLQRLAIDNVEVLWGRAETAGQDPEHREKYHIAVARAVAEMRV 156
Query: 207 LAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ---RT 263
L+EYCLP ++ GG FVAAKG P++EV++++ A+ ++G LL + V+S S G+ RT
Sbjct: 157 LSEYCLPFIQEGGAFVAAKGPFPEQEVEDAQAAISILGGKLLSIDPVQSYSD-GESKPRT 215
Query: 264 AVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV K TP YPR G P K PL
Sbjct: 216 AVTVKKVAHTPPAYPRREGRPLKRPL 241
>gi|376263293|ref|YP_005150013.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. BNL1100]
gi|373947287|gb|AEY68208.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. BNL1100]
Length = 241
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 148/237 (62%), Gaps = 13/237 (5%)
Query: 54 SHFET-LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+H++T ++ Q EQ Y++ L +WN+K+NLTA++D E++ +H DS++I+P I
Sbjct: 16 THYKTEISDTQVEQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPYI----- 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N N+K++DVGTGAG PG+ L I P +TLL+S++KR FL ++ +
Sbjct: 71 ------SNENIKIIDVGTGAGFPGIPLKIVNPKNDITLLDSLDKRIKFLNEVINAVNITQ 124
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ + GRAE G + +RE+YD+AVARAV+ + +L EYCLP V++ G+F+A KG + EE
Sbjct: 125 ISAIHGRAEDFGANPVYREKYDIAVARAVSNLPVLLEYCLPFVKINGIFIAMKGSN-TEE 183
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N +A+ ++G + ++ +E +R VV K R+TP KYPR G P+K PL
Sbjct: 184 FDNCNKALDILGGKIEKIEKMELPFTNIERNVVVVRKFRQTPTKYPRKAGKPSKEPL 240
>gi|220930842|ref|YP_002507751.1| methyltransferase GidB [Clostridium cellulolyticum H10]
gi|220001170|gb|ACL77771.1| methyltransferase GidB [Clostridium cellulolyticum H10]
Length = 241
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 12/227 (5%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q +Q Y++ L +WN+K+NLTA++D E++ +H DS++I+P +KN N
Sbjct: 26 QIKQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPYVKNE-----------N 74
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
LK++D+GTGAG PG+ L I P KVTLL+S++KR FL ++ + + + GRAE
Sbjct: 75 LKIIDIGTGAGFPGIPLKIVNPQNKVTLLDSLDKRVKFLNEVINGINITQISAIHGRAED 134
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
G + +RE+YD+AVARAVA + +L EYCLP V++ G+F+A KG + EE +N +A+ +
Sbjct: 135 FGTNPVYREKYDIAVARAVANLPVLLEYCLPFVKINGIFIAMKGSN-TEEFENCNKALDI 193
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G + ++ +E +R VV K R+TP KYPR G P+K PL
Sbjct: 194 LGGKIEKIEKMELPFTNIERNVVVVRKFRQTPTKYPRKAGKPSKEPL 240
>gi|339442033|ref|YP_004708038.1| hypothetical protein CXIVA_09690 [Clostridium sp. SY8519]
gi|338901434|dbj|BAK46936.1| hypothetical protein CXIVA_09690 [Clostridium sp. SY8519]
Length = 245
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 139/232 (59%), Gaps = 5/232 (2%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ Q Q Y L+ WN KMNLTAV D EV+E+H DSL++I + H +
Sbjct: 18 TLSEAQLAQFLTYYKMLIAWNEKMNLTAVTDFQEVLEKHFLDSLSLIQAVD----LHA-A 72
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+L+DVGTGAG PG+ L IA P V LL+S+NKR FL L N+ +
Sbjct: 73 AEKKPLRLIDVGTGAGFPGIPLKIAFPQLSVVLLDSLNKRIRFLHAVTEELGLTNITAIH 132
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GR+E L + +RE +D+ V+RAVA + L+EYCLP VRVGGLF++ KG + EE + +E
Sbjct: 133 GRSEELARSKEYRESFDLCVSRAVANLSTLSEYCLPFVRVGGLFLSYKGSEVDEEAETAE 192
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G S+ ++ + R+ VV K + TP KYPR GTP++ PL
Sbjct: 193 HAIHLLGGSIREIKRFSLPNTTYGRSLVVIQKKKNTPGKYPRKAGTPSREPL 244
>gi|196041983|ref|ZP_03109270.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
gi|196027238|gb|EDX65858.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
Length = 239
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKSFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|52145290|ref|YP_086747.1| 16S rRNA methyltransferase GidB [Bacillus cereus E33L]
gi|81685204|sp|Q630C0.1|RSMG_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51978759|gb|AAU20309.1| glucose-inhibited division protein B [Bacillus cereus E33L]
Length = 239
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG +EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAAKEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423394319|ref|ZP_17371520.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-1]
gi|423410284|ref|ZP_17387431.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-3]
gi|401648281|gb|EJS65877.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-3]
gi|401658690|gb|EJS76180.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-1]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGNLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229164433|ref|ZP_04292361.1| Methyltransferase GidB [Bacillus cereus R309803]
gi|228619038|gb|EEK75936.1| Methyltransferase GidB [Bacillus cereus R309803]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229035140|ref|ZP_04189086.1| Methyltransferase GidB [Bacillus cereus AH1271]
gi|228728206|gb|EEL79236.1| Methyltransferase GidB [Bacillus cereus AH1271]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229176158|ref|ZP_04303650.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|423461738|ref|ZP_17438534.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X2-1]
gi|228607317|gb|EEK64647.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|401134971|gb|EJQ42577.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X2-1]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSEPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELGDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGNLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|30023506|ref|NP_835137.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 14579]
gi|75761488|ref|ZP_00741452.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218232716|ref|YP_002370257.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218900623|ref|YP_002449034.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228905426|ref|ZP_04069381.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|228942631|ref|ZP_04105163.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228955732|ref|ZP_04117727.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228961746|ref|ZP_04123349.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228968634|ref|ZP_04129617.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228975561|ref|ZP_04136113.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982197|ref|ZP_04142486.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|229020707|ref|ZP_04177434.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|229026923|ref|ZP_04183246.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|229051151|ref|ZP_04194695.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|229072947|ref|ZP_04206143.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|229099909|ref|ZP_04230832.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|229112895|ref|ZP_04242426.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|229118972|ref|ZP_04248317.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|229130728|ref|ZP_04259681.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|229148032|ref|ZP_04276371.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|229181728|ref|ZP_04309051.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|296505910|ref|YP_003667610.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|365162558|ref|ZP_09358686.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
7_6_55CFAA_CT2]
gi|384189571|ref|YP_005575467.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
gi|402562909|ref|YP_006605633.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-771]
gi|407707950|ref|YP_006831535.1| polysaccharide deacetylase pdaB [Bacillus thuringiensis MC28]
gi|410677896|ref|YP_006930267.1| ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis Bt407]
gi|423362675|ref|ZP_17340175.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD022]
gi|423376726|ref|ZP_17354010.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1O-2]
gi|423386964|ref|ZP_17364219.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-2]
gi|423416607|ref|ZP_17393696.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-1]
gi|423427568|ref|ZP_17404599.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-2]
gi|423439821|ref|ZP_17416727.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X2-1]
gi|423450018|ref|ZP_17426897.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5O-1]
gi|423462892|ref|ZP_17439660.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-1]
gi|423506629|ref|ZP_17483218.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HD73]
gi|423526704|ref|ZP_17503149.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB1-1]
gi|423532249|ref|ZP_17508667.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB2-9]
gi|423542481|ref|ZP_17518871.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB4-10]
gi|423548712|ref|ZP_17525070.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB5-5]
gi|423565627|ref|ZP_17541902.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A1]
gi|423583652|ref|ZP_17559763.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD014]
gi|423589299|ref|ZP_17565385.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD045]
gi|423618818|ref|ZP_17594651.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD115]
gi|423621481|ref|ZP_17597259.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD148]
gi|423632797|ref|ZP_17608542.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD154]
gi|423633670|ref|ZP_17609323.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD156]
gi|423651320|ref|ZP_17626890.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD169]
gi|423658394|ref|ZP_17633693.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD200]
gi|434378642|ref|YP_006613286.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-789]
gi|449092556|ref|YP_007424997.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452201992|ref|YP_007482073.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|38257406|sp|Q814F8.1|RSMG_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725350|sp|B7IST2.1|RSMG_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725351|sp|B7H7A0.1|RSMG_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29899067|gb|AAP12338.1| Glucose inhibited division protein B [Bacillus cereus ATCC 14579]
gi|74491027|gb|EAO54279.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218160673|gb|ACK60665.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218542469|gb|ACK94863.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228601761|gb|EEK59259.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|228635457|gb|EEK91948.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|228652745|gb|EEL08630.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|228664497|gb|EEL19993.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|228670574|gb|EEL25887.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|228683524|gb|EEL37479.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|228710193|gb|EEL62171.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|228722214|gb|EEL73615.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|228734381|gb|EEL85052.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|228740602|gb|EEL90873.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|228777549|gb|EEM25827.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|228784171|gb|EEM32198.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791063|gb|EEM38681.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228797940|gb|EEM44950.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803960|gb|EEM50584.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228817057|gb|EEM63150.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228854246|gb|EEM98949.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|296326962|gb|ADH09890.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|326943280|gb|AEA19176.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
gi|363618091|gb|EHL69447.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
7_6_55CFAA_CT2]
gi|401076949|gb|EJP85294.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD022]
gi|401108907|gb|EJQ16837.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-2]
gi|401109991|gb|EJQ17907.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3X2-1]
gi|401127316|gb|EJQ35043.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5O-1]
gi|401168728|gb|EJQ75987.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB4-10]
gi|401174829|gb|EJQ82036.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB5-5]
gi|401193309|gb|EJR00315.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A1]
gi|401209712|gb|EJR16471.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD014]
gi|401224538|gb|EJR31092.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD045]
gi|401252294|gb|EJR58555.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD115]
gi|401259443|gb|EJR65619.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD154]
gi|401263236|gb|EJR69365.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD148]
gi|401279372|gb|EJR85301.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD169]
gi|401282737|gb|EJR88635.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD156]
gi|401288124|gb|EJR93886.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD200]
gi|401630816|gb|EJS48614.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-2]
gi|401640971|gb|EJS58696.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1O-2]
gi|401791561|gb|AFQ17600.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-771]
gi|401877199|gb|AFQ29366.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis HD-789]
gi|402421453|gb|EJV53706.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X2-1]
gi|402422701|gb|EJV54929.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-1]
gi|402447294|gb|EJV79150.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HD73]
gi|402454576|gb|EJV86366.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB1-1]
gi|402465110|gb|EJV96794.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuB2-9]
gi|407385635|gb|AFU16136.1| glucose-inhibited division protein B [Bacillus thuringiensis MC28]
gi|409177025|gb|AFV21330.1| ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis Bt407]
gi|449026313|gb|AGE81476.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452107385|gb|AGG04325.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423388231|ref|ZP_17365457.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-3]
gi|401643419|gb|EJS61116.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG1X1-3]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGARESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEILGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423438880|ref|ZP_17415861.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X12-1]
gi|401116007|gb|EJQ23853.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4X12-1]
Length = 239
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|30265500|ref|NP_847877.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42784678|ref|NP_981925.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 10987]
gi|47531068|ref|YP_022417.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. 'Ames
Ancestor']
gi|47568681|ref|ZP_00239378.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49188319|ref|YP_031572.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Sterne]
gi|49480474|ref|YP_039472.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65317463|ref|ZP_00390422.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Bacillus anthracis
str. A2012]
gi|118480509|ref|YP_897660.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis str. Al
Hakam]
gi|165873015|ref|ZP_02217636.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167635020|ref|ZP_02393337.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|167641727|ref|ZP_02399970.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|170689463|ref|ZP_02880653.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|170707495|ref|ZP_02897948.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|177655291|ref|ZP_02936845.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190569287|ref|ZP_03022181.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
Tsiankovskii-I]
gi|196036141|ref|ZP_03103541.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196045489|ref|ZP_03112720.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206975810|ref|ZP_03236721.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218906674|ref|YP_002454508.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|222098959|ref|YP_002533017.1| 16S rRNA methyltransferase gidb [Bacillus cereus Q1]
gi|225867463|ref|YP_002752841.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227818251|ref|YP_002818260.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228918094|ref|ZP_04081622.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930488|ref|ZP_04093488.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936762|ref|ZP_04099553.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949204|ref|ZP_04111472.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229094593|ref|ZP_04225660.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|229124985|ref|ZP_04254159.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|229142231|ref|ZP_04270755.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|229187711|ref|ZP_04314847.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|229199694|ref|ZP_04326337.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|229600306|ref|YP_002869691.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|254687077|ref|ZP_05150935.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
CNEVA-9066]
gi|254724140|ref|ZP_05185925.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A1055]
gi|254735157|ref|ZP_05192867.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Western
North America USA6153]
gi|254742134|ref|ZP_05199821.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Kruger B]
gi|254755956|ref|ZP_05207988.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Vollum]
gi|254761364|ref|ZP_05213386.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Australia
94]
gi|300118816|ref|ZP_07056536.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|301056956|ref|YP_003795167.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|375287503|ref|YP_005107942.1| glucose-inhibited division protein B [Bacillus cereus NC7401]
gi|376269398|ref|YP_005122110.1| glucose-inhibited division protein B [Bacillus cereus F837/76]
gi|384183349|ref|YP_005569111.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|386739346|ref|YP_006212527.1| Methyltransferase gidB [Bacillus anthracis str. H9401]
gi|421508132|ref|ZP_15955048.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. UR-1]
gi|421640479|ref|ZP_16081062.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. BF1]
gi|423355965|ref|ZP_17333589.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
IS075]
gi|423374948|ref|ZP_17352285.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
AND1407]
gi|423554067|ref|ZP_17530393.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
ISP3191]
gi|423571374|ref|ZP_17547617.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A12]
gi|423572858|ref|ZP_17548977.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-D12]
gi|423608176|ref|ZP_17584068.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD102]
gi|38257413|sp|Q81JH4.1|RSMG_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976409|sp|Q6HAF4.1|RSMG_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976456|sp|Q72WU5.1|RSMG_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224574|sp|A0RLR0.1|RSMG_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725349|sp|B7JIK9.1|RSMG_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766877|sp|C3P3F3.1|RSMG_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766878|sp|C3LGT9.1|RSMG_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766879|sp|C1ER75.1|RSMG_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766880|sp|B9IT40.1|RSMG_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30260178|gb|AAP29363.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42740610|gb|AAS44533.1| glucose-inhibited division protein B [Bacillus cereus ATCC 10987]
gi|47506216|gb|AAT34892.1| glucose-inhibited division protein B [Bacillus anthracis str. 'Ames
Ancestor']
gi|47554669|gb|EAL13023.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49182246|gb|AAT57622.1| glucose-inhibited division protein B [Bacillus anthracis str.
Sterne]
gi|49332030|gb|AAT62676.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|118419734|gb|ABK88153.1| 16S rRNA m(7)G-527 methyltransferase [Bacillus thuringiensis str.
Al Hakam]
gi|164711227|gb|EDR16783.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167510281|gb|EDR85684.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|167529494|gb|EDR92244.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|170127491|gb|EDS96365.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|170666565|gb|EDT17338.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|172080218|gb|EDT65310.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190559594|gb|EDV13585.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
Tsiankovskii-I]
gi|195991308|gb|EDX55276.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196023696|gb|EDX62372.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206745904|gb|EDZ57300.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218540166|gb|ACK92564.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|221243018|gb|ACM15728.1| glucose-inhibited division protein B [Bacillus cereus Q1]
gi|225789230|gb|ACO29447.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227006072|gb|ACP15815.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228583789|gb|EEK41964.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|228595779|gb|EEK53463.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|228641249|gb|EEK97556.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|228658486|gb|EEL14152.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|228688840|gb|EEL42671.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|228810487|gb|EEM56840.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822971|gb|EEM68812.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829207|gb|EEM74844.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841574|gb|EEM86690.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229264714|gb|ACQ46351.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|298723784|gb|EFI64506.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|300379125|gb|ADK08029.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|324329433|gb|ADY24693.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358356030|dbj|BAL21202.1| glucose-inhibited division protein B [Bacillus cereus NC7401]
gi|364515198|gb|AEW58597.1| glucose-inhibited division protein B [Bacillus cereus F837/76]
gi|384389197|gb|AFH86858.1| Methyltransferase gidB [Bacillus anthracis str. H9401]
gi|401080912|gb|EJP89194.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
IS075]
gi|401093164|gb|EJQ01279.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
AND1407]
gi|401181500|gb|EJQ88648.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
ISP3191]
gi|401201195|gb|EJR08071.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-A12]
gi|401216327|gb|EJR23039.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MSX-D12]
gi|401238185|gb|EJR44626.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD102]
gi|401821935|gb|EJT21089.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. UR-1]
gi|403392432|gb|EJY89685.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. BF1]
Length = 239
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229159042|ref|ZP_04287098.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
gi|228624461|gb|EEK81232.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
Length = 239
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKKEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229153641|ref|ZP_04281817.1| Methyltransferase GidB [Bacillus cereus m1550]
gi|228629827|gb|EEK86480.1| Methyltransferase GidB [Bacillus cereus m1550]
Length = 239
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 143/234 (61%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ + + D
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI--------TAAFYYDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S S++ DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 68 SKPSSI--CDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|326202764|ref|ZP_08192631.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
gi|325986841|gb|EGD47670.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
Length = 241
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 147/237 (62%), Gaps = 13/237 (5%)
Query: 54 SHFET-LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+H++ ++ Q EQ Y++ L +WN+K+NLTA++D E++ +H DS++I+P I
Sbjct: 16 THYKKEISDTQIEQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPHI----- 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N ++K++DVGTGAG PG+ L I P K+TLL+S++KR FL ++ +
Sbjct: 71 ------GNEDIKIIDVGTGAGFPGIPLKIVNPKNKITLLDSLDKRVKFLNEVINKVNITQ 124
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ + GRAE G + +RE+YD+AVARAV+ + +L EYCLP +++ G+F+A KG EE
Sbjct: 125 ISAIHGRAEDFGTNPVYREKYDIAVARAVSNLPVLLEYCLPFIKINGIFIAMKGSS-TEE 183
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N RA+ ++G + ++ +E +R VV K R+TP KYPR G P+K PL
Sbjct: 184 FDNCNRALDILGGKIEKIEKMELPFTNIERNVVVVRKFRQTPTKYPRKAGKPSKEPL 240
>gi|206970084|ref|ZP_03231037.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|229193733|ref|ZP_04320674.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
gi|206734661|gb|EDZ51830.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|228589758|gb|EEK47636.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
Length = 239
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P K+T+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKITIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|154503058|ref|ZP_02040118.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
gi|336434146|ref|ZP_08613949.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796299|gb|EDN78719.1| 16S rRNA methyltransferase GidB [Ruminococcus gnavus ATCC 29149]
gi|336014525|gb|EGN44372.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_58FAA]
Length = 237
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 143/233 (61%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ H Y + L++WN+ MNLT + + +EV E+H DSLAI+ +
Sbjct: 16 LTERQKEQFHQYYELLVEWNKVMNLTGITEYDEVNEKHFVDSLAIVKTV----------D 65
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++D+GTGAG PGL L IA P KV LL+S+ KR FL+ V L +V+ + G
Sbjct: 66 MNQVNSVIDIGTGAGFPGLPLKIAFPHLKVVLLDSLKKRINFLDAVVEKLGLEDVETLHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K ++REQ+D+ V+RAVA + L+EYC+P +RVGG+FV+ K ++E+K SE+
Sbjct: 126 RAEDFAKQTAYREQFDLCVSRAVANLSTLSEYCIPYIRVGGMFVSYKSGTVEDELKQSEK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV L+G + + +V+ Q P + R+ V K T KKYPR G PAK PL
Sbjct: 186 AVSLLGGKIEK--TVKFQLPDTEIGRSFVKIKKISETRKKYPRKAGLPAKEPL 236
>gi|423399681|ref|ZP_17376854.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-2]
gi|423479629|ref|ZP_17456344.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-1]
gi|401657802|gb|EJS75307.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG2X1-2]
gi|402425224|gb|EJV57379.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-1]
Length = 239
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFAIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSEPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELGDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGNLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|296134492|ref|YP_003641739.1| methyltransferase GidB [Thermincola potens JR]
gi|296033070|gb|ADG83838.1| methyltransferase GidB [Thermincola potens JR]
Length = 244
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 150/253 (59%), Gaps = 17/253 (6%)
Query: 42 AKTLTTTRIVNSSHFE---TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHID 98
+K LT ++ E L+ + Y D LL+WN+++NLT++ DVNE+ +H
Sbjct: 2 SKNLTFAELIKQGGQELNLNLDKKAVLLFETYKDLLLEWNQRINLTSITDVNEIAIKHFL 61
Query: 99 DSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRC 158
DSL I+ I+ C ++VD+GTGAG PG+ L IA PD V L++S+ KR
Sbjct: 62 DSLIILGEIE------VKVQC----RVVDIGTGAGFPGIPLKIARPDLNVVLVDSLQKRV 111
Query: 159 VFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVG 218
FL + QL N+++ GRAE LG FRE +D+AVARAVA+M +L EY LP VRVG
Sbjct: 112 AFLREVIDKLQLKNIEVYHGRAEELGHYPEFRESFDLAVARAVAKMPVLVEYNLPFVRVG 171
Query: 219 GLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKK 276
G FVA KG + EEVK + AV +GA L + + E+ PF +R+ ++ K++ TP K
Sbjct: 172 GQFVAFKGPESDEEVKLAANAVFELGAELEE--AKETYLPFIGDRRSLIIYRKTKHTPPK 229
Query: 277 YPRDPGTPAKVPL 289
YPR PG P K PL
Sbjct: 230 YPRRPGLPEKKPL 242
>gi|423613626|ref|ZP_17589486.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD107]
gi|401241691|gb|EJR48078.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD107]
Length = 239
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 143/234 (61%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ + + D
Sbjct: 16 SLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI--------TAAFYYDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S S++ DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 68 SKPSSI--CDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 HALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423410775|ref|ZP_17387895.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3O-2]
gi|423433440|ref|ZP_17410444.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4O-1]
gi|401109507|gb|EJQ17430.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG3O-2]
gi|401111858|gb|EJQ19740.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG4O-1]
Length = 239
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 139/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P K+T+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKITIVDSLQKRINFLNHLAQRLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLP V+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPFVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229106076|ref|ZP_04236689.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
gi|228677342|gb|EEL31606.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
Length = 239
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE Y++ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYEIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423369444|ref|ZP_17346875.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD142]
gi|423471647|ref|ZP_17448391.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-2]
gi|423484495|ref|ZP_17461184.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-2]
gi|423520681|ref|ZP_17497154.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA4-10]
gi|423557004|ref|ZP_17533307.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MC67]
gi|401077881|gb|EJP86208.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD142]
gi|401137956|gb|EJQ45531.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6X1-2]
gi|401179778|gb|EJQ86941.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA4-10]
gi|401193779|gb|EJR00781.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
MC67]
gi|402431458|gb|EJV63526.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG6O-2]
Length = 239
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 SLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|150392471|ref|YP_001322520.1| 16S rRNA methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
gi|166989741|sp|A6TXE3.1|RSMG_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149952333|gb|ABR50861.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
Length = 239
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 144/233 (61%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ Q +Q+ Y D LL+WN KMNLTA+ + EVM +H DSL+ I ++ Y +
Sbjct: 18 IDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSLSCI---QSQYLKEEGT- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++DVGTGAG PG+ L + P K+TLL+S+NKR FL+ L +V V G
Sbjct: 74 ------MIDVGTGAGFPGIPLKVYFPKLKLTLLDSLNKRVEFLKEVSQELGLEDVNFVHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ + REQYD AVARAVA + +L EYCLP V+VGG F+ KG +EE++NS+
Sbjct: 128 RAEECGQEETHREQYDYAVARAVASLNVLVEYCLPFVKVGGYFICQKGPQLKEEIQNSQN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRT--AVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G +++ E PF T +V K ++TP KYPR PGTP+K P+
Sbjct: 188 AITVLGGKVVE--QKEITLPFSDITHSLLVIEKIKQTPTKYPRKPGTPSKKPI 238
>gi|423644639|ref|ZP_17620256.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD166]
gi|401270271|gb|EJR76294.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD166]
Length = 239
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE Y++ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYNIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|423451269|ref|ZP_17428122.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X1-1]
gi|401146277|gb|EJQ53793.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BAG5X1-1]
Length = 239
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 SLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEDVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|228911322|ref|ZP_04075126.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
gi|228848340|gb|EEM93190.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
Length = 239
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYYD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 67 FSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 127 RAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKY 186
Query: 239 AVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 187 ALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|402554414|ref|YP_006595685.1| 16S rRNA methyltransferase GidB [Bacillus cereus FRI-35]
gi|401795624|gb|AFQ09483.1| 16S rRNA methyltransferase GidB [Bacillus cereus FRI-35]
Length = 239
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYYD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 67 FSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKY 186
Query: 239 AVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 187 ALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|217962974|ref|YP_002341552.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
gi|226725352|sp|B7HZG8.1|RSMG_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217066626|gb|ACJ80876.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
Length = 239
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYYD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 67 FSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 127 RAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGKY 186
Query: 239 AVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 187 ALEVLGGDLKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229014648|ref|ZP_04171762.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|229065141|ref|ZP_04200434.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|229136307|ref|ZP_04265054.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|229170185|ref|ZP_04297871.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|423490630|ref|ZP_17467312.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BtB2-4]
gi|423496354|ref|ZP_17472998.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER057]
gi|423496852|ref|ZP_17473469.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER074]
gi|423513067|ref|ZP_17489597.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-1]
gi|423520139|ref|ZP_17496620.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-4]
gi|423595344|ref|ZP_17571374.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD048]
gi|423597261|ref|ZP_17573261.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD078]
gi|423659666|ref|ZP_17634835.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM022]
gi|423671030|ref|ZP_17646059.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM034]
gi|423672747|ref|ZP_17647686.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM062]
gi|228613286|gb|EEK70425.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228647179|gb|EEL03267.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|228716170|gb|EEL67889.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|228746659|gb|EEL96548.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|401149536|gb|EJQ57007.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER057]
gi|401156732|gb|EJQ64135.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-4]
gi|401163272|gb|EJQ70619.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
CER074]
gi|401222020|gb|EJR28622.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD048]
gi|401238793|gb|EJR45225.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VD078]
gi|401294524|gb|EJS00152.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM034]
gi|401304294|gb|EJS09851.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM022]
gi|401311261|gb|EJS16568.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
VDM062]
gi|402428975|gb|EJV61066.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
BtB2-4]
gi|402446110|gb|EJV77973.1| ribosomal RNA small subunit methyltransferase G [Bacillus cereus
HuA2-1]
Length = 239
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 SLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|229000271|ref|ZP_04159840.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
gi|229007796|ref|ZP_04165382.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228753473|gb|EEM02925.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228759603|gb|EEM08580.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
Length = 239
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 139/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+ +
Sbjct: 16 NLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYN 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE +D+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESFDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R + +K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEILGGELKEISTF--QLPFEESERNILAIVKKRKTPKKYPRKPGTPNKLPI 237
>gi|387781644|ref|YP_005756442.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus LGA251]
gi|344178746|emb|CCC89238.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus LGA251]
Length = 239
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+ Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LNETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|379797030|ref|YP_005327031.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356874023|emb|CCE60362.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 239
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 138/236 (58%), Gaps = 11/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H LN Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 12 EHHIELNETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF-- 67
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N L L DVG GAG P + L I P KVT+++S+NKR FL H S L +V
Sbjct: 68 ------NQPLSLCDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELYLEDV 121
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+ RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG FVA K +EE+
Sbjct: 122 SFIHDRAETFGKGV-YRESYDIVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEEL 180
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ ++G ++ + + E G+R V K R+TPKKYPR PGTP K PL
Sbjct: 181 EEAQFAIGVLGGNVTETHTFELPEDAGERQMFVIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|228994201|ref|ZP_04154101.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
gi|228765653|gb|EEM14307.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
Length = 239
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 139/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+ +
Sbjct: 16 NLSPRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYN 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE +D+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESFDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R + +K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEILGGELKEISTF--QLPFEESERNILAIVKKRKTPKKYPRKPGTPNKLPI 237
>gi|255080220|ref|XP_002503690.1| predicted protein [Micromonas sp. RCC299]
gi|226518957|gb|ACO64948.1| predicted protein [Micromonas sp. RCC299]
Length = 320
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 151/256 (58%), Gaps = 8/256 (3%)
Query: 39 RTRAKTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHID 98
RT A T + S+ L+ Q +Q+ + LL+ N+ MNLT V+EV+ RH+
Sbjct: 68 RTSAAADVDTDAILDSY---LDDAQMDQVRTFATTLLEKNKVMNLTGALTVDEVLGRHVA 124
Query: 99 DSLAIIPPIKNSYTSHCDS-SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKR 157
DSLA+IP I+ + + S + + ++++DVG+GAG PG+ LAIA P W+VTLL+++ KR
Sbjct: 125 DSLALIPAIERALDAGASSRNPGAKIRVMDVGSGAGFPGMALAIARPTWEVTLLDTLQKR 184
Query: 158 CVFLEHAVSLTQLLNVQIVRGRAETLGK-DVSFREQYDVAVARAVAEMRILAEYCLPLVR 216
FL A + NV+ + RAE GK RE YDV ARAVAE+R+LAE C+PLVR
Sbjct: 185 TSFLADAAAECGADNVRTLWSRAEDAGKVGNEHREAYDVVTARAVAELRVLAELCVPLVR 244
Query: 217 VGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRT 273
VGG FVA K E + A++ +G + V+S P G+ RTAVV +K R T
Sbjct: 245 VGGAFVAMKNSLASTAGETSAAAGAIETLGGTPFVANEVQSVGPDGELRTAVVSVKERAT 304
Query: 274 PKKYPRDPGTPAKVPL 289
P KYPR G P K PL
Sbjct: 305 PDKYPRRAGMPNKRPL 320
>gi|228924227|ref|ZP_04087498.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835445|gb|EEM80815.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 239
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 139/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+V G F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVKVRGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|418325249|ref|ZP_12936456.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU071]
gi|365228498|gb|EHM69679.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU071]
Length = 239
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 139/231 (60%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + C+ E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETCTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|159473280|ref|XP_001694767.1| methyltransferase [Chlamydomonas reinhardtii]
gi|158276579|gb|EDP02351.1| methyltransferase [Chlamydomonas reinhardtii]
Length = 258
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 147/259 (56%), Gaps = 37/259 (14%)
Query: 67 IHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS------------- 113
++ Y+D +L+ N+ MNLTAV+D + +RH+ DSLA++P I+ +
Sbjct: 1 MNTYLDHMLEVNQTMNLTAVRDKGDAWQRHVVDSLALLPVIERHAAAMGLLRPAGPAVAG 60
Query: 114 -----------------------HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTL 150
S L+L+DVGTGAGLPG+++A A P WKVTL
Sbjct: 61 AEAGAAEARGSSGRSAGSSSGSSSRSSGDGVELRLIDVGTGAGLPGMIIAAARPQWKVTL 120
Query: 151 LESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEY 210
L+++ KRC FL+ A + L NV +V RAE G+ R+ YDVAVARAVAE R+LAE
Sbjct: 121 LDTLRKRCDFLKEAAARAGLRNVDVVWCRAEEGGRRPELRQAYDVAVARAVAETRVLAEL 180
Query: 211 CLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270
C+P VR GGL+VAAKG DP+ EV + A+ +G L L + Q TA+V LK
Sbjct: 181 CMPFVRTGGLWVAAKGPDPEAEVAAASNAIGQLGGRKLALERAQQAQAQ-QFTALVVLKD 239
Query: 271 RRTPKKYPRDPGTPAKVPL 289
+ TP ++PR PGTP K PL
Sbjct: 240 KSTPARFPRQPGTPNKKPL 258
>gi|333372841|ref|ZP_08464762.1| glucose inhibited division protein B [Desmospora sp. 8437]
gi|332971195|gb|EGK10158.1| glucose inhibited division protein B [Desmospora sp. 8437]
Length = 242
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q + + Y L++ N+KMNLTA+ D EV +H DSL + S+ S +
Sbjct: 19 LNGEQLDLFYRYYHLLVEGNKKMNLTAITDEKEVFVKHFFDSLTLA-----SHLSFAEVD 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PG+ L IA P ++ LL+S+NKR F++ +V+ L V+ V G
Sbjct: 74 S-----LIDVGTGAGFPGIPLKIAYPHLRLVLLDSLNKRVTFMKESVAELGLRGVECVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + FRE +DVA ARAVA + +LAEYCLP VRVGG FVA KG D +EEV+ +
Sbjct: 129 RAEEAARKPMFRESFDVATARAVARLNVLAEYCLPFVRVGGRFVALKGADVEEEVEQARP 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
V+ +G S+ G+R +V K R TPK YPR GTPA+ PL
Sbjct: 189 GVRTLGGKAPDSISLSLPEQMGERHLIVVTKERPTPKAYPRKAGTPARNPL 239
>gi|417897267|ref|ZP_12541204.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21235]
gi|341839767|gb|EGS81321.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21235]
Length = 239
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D + V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHNVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV +ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVIARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|331083512|ref|ZP_08332624.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404205|gb|EGG83753.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
Length = 240
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q++Q Y + L++WN+ MNLT + D EV+ +H DSL+I+ + S S C
Sbjct: 19 LNEEQKKQFVQYYELLVEWNKVMNLTGITDFEEVLLKHFVDSLSIVKGMDMSKISTC--- 75
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+DVGTGAG PG+ L IA P ++TLL+S+NKR FL + L +Q V G
Sbjct: 76 -------IDVGTGAGFPGIPLKIAFPHLQITLLDSLNKRLNFLNEVIEQLGLTGIQTVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE+YD++V+RAV+ + L+EYC+P V+ GG FV+ K EEV +++
Sbjct: 129 RAEDAARKAEYREKYDLSVSRAVSRLASLSEYCMPYVKEGGYFVSYKSGKAAEEVSEAKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L + + RT VV K + TPKKYPR GTP K P+
Sbjct: 189 AISVLGGKLEKEVDFKLYKTDMDRTLVVIKKVKGTPKKYPRKAGTPTKEPI 239
>gi|229087969|ref|ZP_04220076.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
gi|228695338|gb|EEL48216.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
Length = 239
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 138/234 (58%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 TLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P K+T+++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKITIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE +D+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKDGVRESFDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R + K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEISTF--QLPFEDSERNILSISKKRKTPKKYPRKPGTPNKLPI 237
>gi|153854264|ref|ZP_01995563.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
gi|149753039|gb|EDM62970.1| 16S rRNA methyltransferase GidB [Dorea longicatena DSM 13814]
Length = 237
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 140/231 (60%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+ Q+EQ +Y L +WN+ MNLT + + EV+E+H DSL+I+ + +H D+
Sbjct: 16 ITDEQKEQFDIYHKLLEEWNKVMNLTGITEYEEVVEKHYVDSLSIVKVMN---MNHVDT- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++DVGTGAG PGL L IA P KVTLL+S+NKR FL + L ++ + G
Sbjct: 72 ------VIDVGTGAGFPGLPLKIAFPHLKVTLLDSLNKRIKFLNTVIEELGLEDIHTIHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE KD ++RE+YD+ V+RAVA + L+EYCLP V+VGG+F+ K + EEVK S++
Sbjct: 126 RAEDYAKDAAYREKYDLCVSRAVANLATLSEYCLPYVKVGGMFIPYKSGEIDEEVKGSKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G + + E R+ V K + T KKYPR G P++ P+
Sbjct: 186 AVKVLGGEIEDVVKFELPGTDIGRSFVKIHKVKNTAKKYPRKAGMPSREPI 236
>gi|418281881|ref|ZP_12894679.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21202]
gi|365172169|gb|EHM62899.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21202]
Length = 239
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|258423242|ref|ZP_05686134.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|379022399|ref|YP_005299061.1| rRNA small subunit methyltransferase, glucoseinhibited division
protein GidB [Staphylococcus aureus subsp. aureus M013]
gi|384551474|ref|YP_005740726.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|416840834|ref|ZP_11904008.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|416845653|ref|ZP_11906108.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
gi|417891138|ref|ZP_12535205.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21200]
gi|417900815|ref|ZP_12544694.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21266]
gi|418307283|ref|ZP_12919008.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21194]
gi|418561852|ref|ZP_13126330.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21262]
gi|418951881|ref|ZP_13503947.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-160]
gi|448744191|ref|ZP_21726091.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/Y21]
gi|257846571|gb|EEV70593.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|302334324|gb|ADL24517.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|323439703|gb|EGA97421.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|323443276|gb|EGB00893.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
gi|341847129|gb|EGS88315.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21266]
gi|341853005|gb|EGS93888.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21200]
gi|359831708|gb|AEV79686.1| rRNA small subunit methyltransferase, glucoseinhibited division
protein GidB [Staphylococcus aureus subsp. aureus M013]
gi|365245852|gb|EHM86456.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21194]
gi|371975346|gb|EHO92641.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21262]
gi|375370835|gb|EHS74631.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-160]
gi|445562468|gb|ELY18639.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/Y21]
Length = 239
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|163943162|ref|YP_001648046.1| 16S rRNA methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
gi|229564286|sp|A9VTL8.1|RSMG_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163865359|gb|ABY46418.1| methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
Length = 239
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 139/234 (59%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 SLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSV----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + DVG GAG P + L I P KV +++S+ KR FL H +L +V
Sbjct: 66 DFSKPFSICDVGAGAGFPSIPLKICFPHLKVKIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YALEVLGGELKEMSTF--QLPFEESERNILLIEKKRKTPKKYPRKPGTPNKLPI 237
>gi|21284357|ref|NP_647445.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MW2]
gi|49487487|ref|YP_044708.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651104|ref|YP_187522.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus COL]
gi|87161954|ref|YP_495278.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196665|ref|YP_501496.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222822|ref|YP_001333644.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161510919|ref|YP_001576578.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253730395|ref|ZP_04864560.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|258451371|ref|ZP_05699402.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|262049465|ref|ZP_06022337.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|262051896|ref|ZP_06024111.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|282920715|ref|ZP_06328434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|284023033|ref|ZP_06377431.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 132]
gi|294849824|ref|ZP_06790564.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|297209456|ref|ZP_06925854.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911480|ref|ZP_07128929.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|379015829|ref|YP_005292065.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus VC40]
gi|415687289|ref|ZP_11451216.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|417648183|ref|ZP_12298013.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|417654022|ref|ZP_12303750.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
gi|417796925|ref|ZP_12444127.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21305]
gi|418286915|ref|ZP_12899551.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21209]
gi|418312252|ref|ZP_12923762.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21334]
gi|418314806|ref|ZP_12926272.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21340]
gi|418318235|ref|ZP_12929644.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21232]
gi|418322272|ref|ZP_12933605.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus VCU006]
gi|418577914|ref|ZP_13142012.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418598596|ref|ZP_13162105.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21343]
gi|418641209|ref|ZP_13203422.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-24]
gi|418644000|ref|ZP_13206152.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-55]
gi|418648777|ref|ZP_13210814.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-88]
gi|418650089|ref|ZP_13212111.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-91]
gi|418874087|ref|ZP_13428359.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418902280|ref|ZP_13456324.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418905561|ref|ZP_13459588.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418910541|ref|ZP_13464529.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG547]
gi|418924442|ref|ZP_13478347.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418927285|ref|ZP_13481175.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418933006|ref|ZP_13486832.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418986981|ref|ZP_13534657.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419773345|ref|ZP_14299354.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus CO-23]
gi|421148825|ref|ZP_15608484.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742279|ref|ZP_16796286.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745328|ref|ZP_16799271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|440736063|ref|ZP_20915664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443638039|ref|ZP_21122096.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21196]
gi|448740848|ref|ZP_21722822.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/314250]
gi|23821578|sp|Q8NUF9.1|RSMG_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976399|sp|Q6G5W6.1|RSMG_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71152075|sp|Q5HCI5.1|RSMG_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122538498|sp|Q2FUQ4.1|RSMG_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123484189|sp|Q2FDF0.1|RSMG_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|172049079|sp|A6QKK0.1|RSMG_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040723|sp|A8YYR9.1|RSMG_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21205801|dbj|BAB96493.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus MW2]
gi|49245930|emb|CAG44411.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285290|gb|AAW37384.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87127928|gb|ABD22442.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204223|gb|ABD32033.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150375622|dbj|BAF68882.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160369728|gb|ABX30699.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725875|gb|EES94604.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257860901|gb|EEV83718.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|259160223|gb|EEW45252.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|259162462|gb|EEW47032.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|282594123|gb|EFB99111.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|294823372|gb|EFG39801.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|296885917|gb|EFH24852.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887659|gb|EFK82855.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|315197914|gb|EFU28247.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141413|gb|EFW33256.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144396|gb|EFW36161.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731847|gb|EGG68207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|329732581|gb|EGG68931.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
gi|334267963|gb|EGL86414.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21305]
gi|365165079|gb|EHM56908.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21209]
gi|365223301|gb|EHM64590.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus VCU006]
gi|365238600|gb|EHM79432.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21334]
gi|365243558|gb|EHM84232.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21232]
gi|365244409|gb|EHM85068.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21340]
gi|374364526|gb|AEZ38631.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus VC40]
gi|374399373|gb|EHQ70514.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21343]
gi|375019369|gb|EHS12923.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-24]
gi|375025192|gb|EHS18599.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-88]
gi|375026980|gb|EHS20357.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-55]
gi|375028558|gb|EHS21901.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-91]
gi|377699796|gb|EHT24142.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377720993|gb|EHT45138.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377728355|gb|EHT52457.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG547]
gi|377740995|gb|EHT64991.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377745633|gb|EHT69609.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377747646|gb|EHT71610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377764861|gb|EHT88711.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377773180|gb|EHT96926.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC128]
gi|377773595|gb|EHT97340.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC93]
gi|383972918|gb|EID88941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus CO-23]
gi|394330927|gb|EJE57015.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|436429830|gb|ELP27194.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443410012|gb|ELS68491.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21196]
gi|445548379|gb|ELY16631.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus KT/314250]
Length = 239
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|253733843|ref|ZP_04868008.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|385782927|ref|YP_005759098.1| rRNA small subunit methyltransferase G [Staphylococcus aureus
subsp. aureus 11819-97]
gi|417899844|ref|ZP_12543744.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21259]
gi|418573896|ref|ZP_13138076.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21333]
gi|253728146|gb|EES96875.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|341843907|gb|EGS85127.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21259]
gi|364523916|gb|AEW66666.1| rRNA small subunit methyltransferase G [Staphylococcus aureus
subsp. aureus 11819-97]
gi|371980597|gb|EHO97799.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21333]
Length = 239
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL ++ +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDISFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|386832268|ref|YP_006238922.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|417799326|ref|ZP_12446470.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21310]
gi|418657140|ref|ZP_13218917.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-105]
gi|334274228|gb|EGL92555.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21310]
gi|375031316|gb|EHS24598.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-105]
gi|385197660|emb|CCG17315.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus HO 5096 0412]
Length = 239
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSVA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|417905285|ref|ZP_12549097.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21269]
gi|341844150|gb|EGS85369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21269]
Length = 239
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+ Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LNETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL + S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|282902627|ref|ZP_06310520.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|282918064|ref|ZP_06325814.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282921286|ref|ZP_06329004.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|283767786|ref|ZP_06340701.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|386730441|ref|YP_006196824.1| Methyltransferase [Staphylococcus aureus subsp. aureus 71193]
gi|404480033|ref|YP_006711463.1| glucose inhibited division protein B [Staphylococcus aureus
08BA02176]
gi|418309631|ref|ZP_12921183.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21331]
gi|418596822|ref|ZP_13160370.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21342]
gi|418980531|ref|ZP_13528310.1| GidB [Staphylococcus aureus subsp. aureus DR10]
gi|282315701|gb|EFB46085.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|282318349|gb|EFB48709.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282597086|gb|EFC02045.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|283461665|gb|EFC08749.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|365238437|gb|EHM79273.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21331]
gi|374396623|gb|EHQ67854.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21342]
gi|379991701|gb|EIA13167.1| GidB [Staphylococcus aureus subsp. aureus DR10]
gi|384231734|gb|AFH70981.1| GidB [Staphylococcus aureus subsp. aureus 71193]
gi|404441522|gb|AFR74715.1| putative glucose inhibited division protein B [Staphylococcus
aureus 08BA02176]
Length = 239
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q+ Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|418887929|ref|ZP_13442068.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377756542|gb|EHT80439.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 239
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTEIQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|358061306|ref|ZP_09147960.1| hypothetical protein HMPREF9473_00022 [Clostridium hathewayi
WAL-18680]
gi|356700065|gb|EHI61571.1| hypothetical protein HMPREF9473_00022 [Clostridium hathewayi
WAL-18680]
Length = 241
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 143/231 (61%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q + Y + L++WN+ MNLTA+ ++ +V+ +H DSL+++ + S
Sbjct: 20 LSEHQLHQFYQYFELLVEWNKVMNLTAITELEDVVTKHFVDSLSLVKAV----------S 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ K++D+GTGAG PG+ L IA P+ K+TLL+S+NKR FL + QL +Q V G
Sbjct: 70 DLSDEKILDMGTGAGFPGIPLKIAFPELKITLLDSLNKRINFLNEVIGQLQLGEIQAVHG 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +REQYD V+RAVA + L+EYC+P V++GG F+ K +EE+ ++
Sbjct: 130 RAEDYGRDKLYREQYDYCVSRAVANLSTLSEYCMPYVKIGGAFIPYKSGKIEEELNQAKG 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+L+G + ++ + +R+ V+ K+ T KKYPR G P+K PL
Sbjct: 190 AVKLLGGKIEEVVTFVLPKTDVERSFVIVRKTEGTSKKYPRKAGLPSKEPL 240
>gi|384548919|ref|YP_005738172.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
gi|298695966|gb|ADI99188.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
Length = 239
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D + V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHNVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|387603986|ref|YP_005735507.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
gi|283471924|emb|CAQ51135.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
Length = 239
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q+ Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGKEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|225570318|ref|ZP_03779343.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
gi|225160850|gb|EEG73469.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
Length = 237
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 139/232 (59%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
++N RQ+EQ + D L++WN+ MNLT + + EV+E+H DSL+++ I+
Sbjct: 15 SINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSLVKAIE--------- 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ ++D+GTGAG PG+ L IA P +TLL+S+NKR FL+ + T L +++ +
Sbjct: 66 -IDKIHSVIDIGTGAGFPGIPLKIAFPHLNITLLDSLNKRIRFLDTVIERTGLKDIRTIH 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE K +RE YD+ V+RAVA + L+EYC+P +R+GG+F++ K D + E ++S
Sbjct: 125 GRAEDYAKQKEYREMYDLCVSRAVANLATLSEYCIPYIRIGGIFISYKSGDVENEKEDSR 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A L+G + + R+ V+ K R+T K+YPR G P+K PL
Sbjct: 185 NAAALLGGRIKDTVKFQLPGTDIGRSFVIIEKERQTAKRYPRKAGLPSKEPL 236
>gi|302388590|ref|YP_003824412.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
gi|302199218|gb|ADL06789.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
Length = 243
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 144/231 (62%), Gaps = 8/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q + Y L++WN+ MNLTA+ +++EV+ +H DSL+++ +K T
Sbjct: 20 LKNYQINQFYDYFQLLIEWNKFMNLTAITEMDEVITKHFVDSLSLVKAVKEMRTK----- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++DVGTGAG PG+ L IA PD K+TL++S+NKR FL A++ +L ++ + G
Sbjct: 75 ---NYRIIDVGTGAGFPGIPLKIAFPDLKITLMDSLNKRINFLNEAINRLELKEIEAIHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG+D REQYD+ ++RAVA + L+EYC+P V+ GG F+ K +EE+ ++
Sbjct: 132 RAEDLGRDPLHREQYDLCLSRAVANLSTLSEYCMPFVKPGGYFIPYKSGKIEEELGAAKH 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G ++ ++ + +R+ V +K+ T KKYPR G P+K PL
Sbjct: 192 AIFLLGGNVEEVKTFLLPGTEVERSLVKIVKNHGTSKKYPRKAGLPSKEPL 242
>gi|282912270|ref|ZP_06320066.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|384866358|ref|YP_005746554.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
gi|282323966|gb|EFB54282.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|312436863|gb|ADQ75934.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
Length = 239
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 138/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL + S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV +ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVIARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|82752288|ref|YP_418029.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus RF122]
gi|123549494|sp|Q2YZC0.1|RSMG_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82657819|emb|CAI82274.1| glucose inhibited division protein B [Staphylococcus aureus RF122]
Length = 239
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYCLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTYELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|210614310|ref|ZP_03290158.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
gi|210150726|gb|EEA81735.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
Length = 237
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+ Q + + L++WN+ MNLT + + EV E+H DSL+I T D +
Sbjct: 16 LNDEQKRQFDSFYELLVEWNKVMNLTGITEYEEVNEKHFVDSLSI--------TKAIDMN 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C NL +D+GTGAG PG+ L IA P KV LL+S+NKR FL + +L++++ + G
Sbjct: 68 CVDNL--IDIGTGAGFPGIPLKIAFPHLKVVLLDSLNKRIKFLNTVIEELELIDIETIHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +REQ+D+ V+RAVA + L+EYC+P + GG+F+ K + +EEV +++
Sbjct: 126 RAEDFAKQGEYREQFDLCVSRAVANLSTLSEYCMPYIHTGGMFIPYKSGEIEEEVTGAKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + + + R+ V K + TPKKYPR G PAK P+
Sbjct: 186 AVHVLGGKIEDVVKFQLPGTEIGRSFVKIKKYQNTPKKYPRKAGLPAKEPI 236
>gi|404418095|ref|ZP_10999873.1| 16S rRNA methyltransferase GidB [Staphylococcus arlettae CVD059]
gi|403489498|gb|EJY95065.1| 16S rRNA methyltransferase GidB [Staphylococcus arlettae CVD059]
Length = 239
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 135/237 (56%), Gaps = 11/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H TL +QQ+Q Y D L+ WN KMNLT++ + ++V +H DS+A P +
Sbjct: 11 SEHGITLTAKQQQQFQTYYDMLVSWNDKMNLTSITEEHDVYLKHFYDSIA--PSFYADF- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ + DVG GAG P + L I P+ +VT+++S+NKR FL +L N
Sbjct: 68 -------QQDYSICDVGAGAGFPSIPLKIIYPELQVTIVDSLNKRIQFLNQLADKLELEN 120
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V V RAET GK +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K EE
Sbjct: 121 VSFVHDRAETFGKG-DYRESYDIVTARAVARLSVLSELCLPLVKKGGRFIALKSAKGDEE 179
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++ + + G L QL S E G+R ++ K TPKKYPR PGTP K PL
Sbjct: 180 LEDAKFGIGVFGGKLAQLISYELPEEAGERQMMIIEKRSLTPKKYPRKPGTPNKAPL 236
>gi|358051209|ref|ZP_09145427.1| 16S rRNA methyltransferase GidB [Staphylococcus simiae CCM 7213]
gi|357259285|gb|EHJ09124.1| 16S rRNA methyltransferase GidB [Staphylococcus simiae CCM 7213]
Length = 239
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 137/236 (58%), Gaps = 11/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
+H L Q+EQ Y L++WN KMNLT++ D ++V +H DS I P +
Sbjct: 12 NHGIELTATQKEQFQTYYALLVEWNDKMNLTSITDEHDVYLKHFYDS--ITPSFYYDF-- 67
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N + + DVG GAG P + L I P KVT+++S+NKR FL H + L NV
Sbjct: 68 ------NREITVCDVGAGAGFPSIPLKIIFPQLKVTIVDSLNKRIQFLNHLAAELGLQNV 121
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+ RAET GK V +RE YDV ARAVA + +L+E C+PLV+ GG F+A K +EE+
Sbjct: 122 SFIHDRAETFGKGV-YRESYDVVTARAVARLSVLSELCIPLVKKGGQFIALKSSKGEEEL 180
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ ++G ++ + + E G+R V K R+TPKKYPR PGTP K PL
Sbjct: 181 EEAQFAIHVLGGNVEETYTFELPEDAGERQMFVINKQRQTPKKYPRKPGTPNKTPL 236
>gi|158321888|ref|YP_001514395.1| 16S rRNA methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
gi|166989742|sp|A8MKR7.1|RSMG_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158142087|gb|ABW20399.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
Length = 239
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 145/229 (63%), Gaps = 14/229 (6%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q Q+ Y D LL+WN+KMNLTA+++ +VM +H DSL+ I ++ Y
Sbjct: 22 QINQLIKYKDILLEWNQKMNLTAIEEEKDVMIKHFLDSLSCI---QSKYLKR-------E 71
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
K++DVGTGAG PG+ L IA P ++TLL+S+ KR FLE + T+L V V GRAE
Sbjct: 72 GKMIDVGTGAGFPGVPLKIALPGIELTLLDSLRKRISFLEEVCAETKLGQVDFVHGRAED 131
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
+G+ +RE+YD AV+RAVA + +L EYCLP V+VGG F+ KG EE+ ++E+A+++
Sbjct: 132 IGQSKDYREKYDYAVSRAVAALNVLVEYCLPFVKVGGYFICQKGPQIIEELPDAEKAIKV 191
Query: 243 MGASLLQLCSVESQSPFGQRT--AVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G +++ SV+ PF T +V K ++TP KYPR G P+K P+
Sbjct: 192 LGGEVVEQISVD--LPFSDITHHILVIKKIKQTPSKYPRKAGKPSKEPI 238
>gi|15925700|ref|NP_373234.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50]
gi|15928295|ref|NP_375828.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus N315]
gi|148269141|ref|YP_001248084.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH9]
gi|150395223|ref|YP_001317898.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH1]
gi|156981025|ref|YP_001443284.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu3]
gi|253316836|ref|ZP_04840049.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007481|ref|ZP_05146082.2| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793534|ref|ZP_05642513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|258411160|ref|ZP_05681439.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|258420936|ref|ZP_05683870.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|258438575|ref|ZP_05689798.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|258443969|ref|ZP_05692307.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|258446215|ref|ZP_05694375.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|258449126|ref|ZP_05697232.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|258454396|ref|ZP_05702364.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|269204347|ref|YP_003283616.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282894275|ref|ZP_06302505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|282927746|ref|ZP_06335360.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|295406860|ref|ZP_06816664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|296275691|ref|ZP_06858198.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MR1]
gi|297245895|ref|ZP_06929757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|384865881|ref|YP_005751240.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|387151834|ref|YP_005743398.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|415693113|ref|ZP_11454967.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|417652067|ref|ZP_12301823.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
gi|417801580|ref|ZP_12448668.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21318]
gi|417893981|ref|ZP_12538004.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21201]
gi|418425895|ref|ZP_12998972.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS1]
gi|418428772|ref|ZP_13001752.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS2]
gi|418431660|ref|ZP_13004550.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418435572|ref|ZP_13007412.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS4]
gi|418438327|ref|ZP_13010098.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS5]
gi|418441276|ref|ZP_13012949.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS6]
gi|418441557|ref|ZP_13013184.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS7]
gi|418447223|ref|ZP_13018680.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS8]
gi|418450321|ref|ZP_13021689.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS9]
gi|418453169|ref|ZP_13024484.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS10]
gi|418456106|ref|ZP_13027352.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418458982|ref|ZP_13030167.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418567505|ref|ZP_13131869.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21272]
gi|418640065|ref|ZP_13202301.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-3]
gi|418653209|ref|ZP_13215154.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-99]
gi|418661951|ref|ZP_13223511.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-122]
gi|418876911|ref|ZP_13431153.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418879703|ref|ZP_13433926.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418882664|ref|ZP_13436868.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418885311|ref|ZP_13439467.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418893482|ref|ZP_13447587.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418913284|ref|ZP_13467258.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418918770|ref|ZP_13472719.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418930147|ref|ZP_13483999.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418989913|ref|ZP_13537577.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419783743|ref|ZP_14309526.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-M]
gi|424769531|ref|ZP_18196757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CM05]
gi|443636307|ref|ZP_21120422.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21236]
gi|54037194|sp|P64240.1|RSMG_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041310|sp|P64239.1|RSMG_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224617|sp|A7X7A5.1|RSMG_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040721|sp|A6U593.1|RSMG_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040722|sp|A5IWD5.1|RSMG_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13702667|dbj|BAB43807.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus N315]
gi|14248485|dbj|BAB58872.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu50]
gi|147742210|gb|ABQ50508.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH9]
gi|149947675|gb|ABR53611.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH1]
gi|156723160|dbj|BAF79577.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787506|gb|EEV25846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|257840045|gb|EEV64510.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|257843126|gb|EEV67541.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|257848134|gb|EEV72126.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|257850853|gb|EEV74797.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|257855041|gb|EEV77984.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|257857559|gb|EEV80454.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|257863490|gb|EEV86250.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|262076637|gb|ACY12610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282590506|gb|EFB95584.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|282763320|gb|EFC03450.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|285818373|gb|ADC38860.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|294968325|gb|EFG44350.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|297177260|gb|EFH36513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|312831048|emb|CBX35890.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129539|gb|EFT85531.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725897|gb|EGG62376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
gi|334276624|gb|EGL94878.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21318]
gi|341853488|gb|EGS94369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21201]
gi|371982150|gb|EHO99310.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21272]
gi|375015465|gb|EHS09120.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-3]
gi|375019514|gb|EHS13067.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-99]
gi|375037440|gb|EHS30474.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-122]
gi|377699228|gb|EHT23575.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377701329|gb|EHT25662.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377718573|gb|EHT42745.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377719147|gb|EHT43318.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377726364|gb|EHT50476.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377729253|gb|EHT53349.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377734864|gb|EHT58901.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377759327|gb|EHT83208.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377769056|gb|EHT92834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383364831|gb|EID42137.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-M]
gi|387714917|gb|EIK03028.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS1]
gi|387715086|gb|EIK03192.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387715271|gb|EIK03374.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722705|gb|EIK10491.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS4]
gi|387724419|gb|EIK12076.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS5]
gi|387726660|gb|EIK14208.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS6]
gi|387732599|gb|EIK19814.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS8]
gi|387733956|gb|EIK21114.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS9]
gi|387740828|gb|EIK27751.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS7]
gi|387741243|gb|EIK28100.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS10]
gi|387741720|gb|EIK28553.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387742955|gb|EIK29757.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus VRS11b]
gi|402348176|gb|EJU83171.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CM05]
gi|408424534|emb|CCJ11945.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408426523|emb|CCJ13910.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408428511|emb|CCJ15874.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408430500|emb|CCJ27665.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408432487|emb|CCJ19802.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408434481|emb|CCJ21766.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408436474|emb|CCJ23734.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|408438457|emb|CCJ25700.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus ST228]
gi|443408223|gb|ELS66751.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21236]
Length = 239
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPL++ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLIKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + + G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFKLPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|311032248|ref|ZP_07710338.1| 16S rRNA methyltransferase GidB [Bacillus sp. m3-13]
Length = 238
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 137/232 (59%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q Q Y L++WN KMNLTA+ D EV +H DS+ T+
Sbjct: 16 SLSSQQLSQFDTYYKLLVEWNEKMNLTAITDEEEVYLKHFYDSI----------TASFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N L L DVG GAG P + L I P+ KVT+++S+NKR FL++ + L NV V
Sbjct: 66 DLNQELSLCDVGAGAGFPSIPLKICFPNLKVTIVDSLNKRITFLQNLANELGLKNVHFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK+ +RE++D+ ARAVA + +L+E CLPLV+ GG+FV K +E++ +
Sbjct: 126 DRAETFGKNADYREKFDLVTARAVARLSVLSELCLPLVKEGGMFVPMKAAAASDELEKGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+Q++G L ++ S +R ++ K + TPKKYPR PGTP K PL
Sbjct: 186 KALQILGGKLEKVHSFSLPLEESERNILIINKIKSTPKKYPRKPGTPNKQPL 237
>gi|49484905|ref|YP_042129.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA252]
gi|221141511|ref|ZP_03566004.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|257424192|ref|ZP_05600621.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257426869|ref|ZP_05603271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257432152|ref|ZP_05608515.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257435113|ref|ZP_05611164.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|282907043|ref|ZP_06314891.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282910022|ref|ZP_06317830.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912910|ref|ZP_06320702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282922538|ref|ZP_06330228.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|283959480|ref|ZP_06376921.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497963|ref|ZP_06665817.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511553|ref|ZP_06670247.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|293550162|ref|ZP_06672834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|295429293|ref|ZP_06821915.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589205|ref|ZP_06947846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|304379944|ref|ZP_07362673.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|384863358|ref|YP_005746078.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384871295|ref|YP_005754009.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
gi|387144412|ref|YP_005732806.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|415683069|ref|ZP_11448335.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|417888870|ref|ZP_12532970.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21195]
gi|418281337|ref|ZP_12894150.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21178]
gi|418565289|ref|ZP_13129699.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21264]
gi|418580673|ref|ZP_13144759.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418601075|ref|ZP_13164521.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21345]
gi|418872286|ref|ZP_13426630.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-125]
gi|418890513|ref|ZP_13444638.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418896371|ref|ZP_13450448.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418899305|ref|ZP_13453369.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418907680|ref|ZP_13461698.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG149]
gi|418915837|ref|ZP_13469802.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418921581|ref|ZP_13475505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418947111|ref|ZP_13499499.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-157]
gi|418953125|ref|ZP_13505131.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-189]
gi|418981965|ref|ZP_13529675.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418984488|ref|ZP_13532183.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1500]
gi|424786721|ref|ZP_18213505.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Staphylococcus aureus CN79]
gi|55976401|sp|Q6GD94.1|RSMG_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49243034|emb|CAG41768.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257273210|gb|EEV05312.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257276500|gb|EEV07951.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257283031|gb|EEV13163.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257285709|gb|EEV15825.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|269942296|emb|CBI50711.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|282314759|gb|EFB45145.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|282323010|gb|EFB53329.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282326088|gb|EFB56393.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329942|gb|EFB59463.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|283789072|gb|EFC27899.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919209|gb|EFD96285.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|291096894|gb|EFE27152.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465511|gb|EFF08043.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|295127052|gb|EFG56696.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577716|gb|EFH96429.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|302752587|gb|ADL66764.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304341524|gb|EFM07434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315195222|gb|EFU25610.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|329315430|gb|AEB89843.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
gi|341853802|gb|EGS94681.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21195]
gi|365165438|gb|EHM57225.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21178]
gi|371974444|gb|EHO91776.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21264]
gi|374400066|gb|EHQ71189.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21345]
gi|375367340|gb|EHS71303.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-125]
gi|375375642|gb|EHS79212.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-189]
gi|375376796|gb|EHS80310.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-157]
gi|377705397|gb|EHT29702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377708090|gb|EHT32382.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377710087|gb|EHT34339.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377713865|gb|EHT38073.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377735380|gb|EHT59413.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377737684|gb|EHT61694.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377753664|gb|EHT77581.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377760510|gb|EHT84389.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG149]
gi|377763098|gb|EHT86955.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|421955097|gb|EKU07440.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Staphylococcus aureus CN79]
Length = 239
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL + S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNYLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|373859262|ref|ZP_09601992.1| methyltransferase GidB [Bacillus sp. 1NLA3E]
gi|372450931|gb|EHP24412.1| methyltransferase GidB [Bacillus sp. 1NLA3E]
Length = 238
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q EQ Y L++WN KMNLTA+ + V +H DS+ S + + D
Sbjct: 16 SLSPHQLEQYEQYYQTLVEWNEKMNLTAITEKESVYLKHFFDSI--------SASFYFD- 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N L + DVG GAG P + + IA P+ VT+++S+NKR FLEH +L NV+ +
Sbjct: 67 -FNQPLNICDVGAGAGFPSIPIKIAFPNIHVTIVDSLNKRIHFLEHLADKLKLDNVRFIH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ REQYDV +ARAVA M +L E CLPL +VGG F+A K EE++ +
Sbjct: 126 DRAETFGRNPKHREQYDVVMARAVARMSVLTELCLPLAKVGGTFIAMKAQSASEELEAAN 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +MG L + S +R ++ K + TPK+YPR PGTP K P+
Sbjct: 186 KAITVMGGKLTTVHSFMLPIEESERNLLIVNKMKSTPKQYPRKPGTPNKTPI 237
>gi|404329024|ref|ZP_10969472.1| 16S rRNA methyltransferase GidB [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 235
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q + Y + L++WN+++NLT + D NEV +H DSL T+ D
Sbjct: 15 LSEQQNRQFNRYYEELIEWNKRINLTGITDENEVAVKHFYDSL----------TASFDLP 64
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L++ DVG+GAG PG+ L I PD K+T+++S+ KR FL+H L V +
Sbjct: 65 FAGPLRVCDVGSGAGFPGIPLKILFPDLKLTIVDSLEKRLKFLDHLTDALDLQQVSLEHE 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G REQ+D+ +ARAVA + +L+EYCLPLVR+GG VA KG + +E ++ +
Sbjct: 125 RAETFGHRKDAREQFDLVLARAVAPLSVLSEYCLPLVRIGGFLVAMKGLNAAQETADAGQ 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + + ++E G RT ++ K R TP +YPR PG PA+ PL
Sbjct: 185 AIEKLGGMVDRTMNLELPYHMGSRTIIIIKKMRPTPARYPRKPGIPARKPL 235
>gi|418608964|ref|ZP_13172136.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU065]
gi|374409433|gb|EHQ80227.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU065]
Length = 239
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G +L + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNLKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|418559556|ref|ZP_13124095.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21252]
gi|418992726|ref|ZP_13540368.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG290]
gi|371974734|gb|EHO92051.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21252]
gi|377748733|gb|EHT72689.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus CIG290]
Length = 239
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 135/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L DVG GAG P + L I P KVT+++S+NKR FL H S L +V +
Sbjct: 68 -NQPLSLCDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELHLEDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ G FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDIVTARAVARLSVLSELCLPLVKKDGQFVALKSSKGEEELEEAQF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R V K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFVIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|89100945|ref|ZP_01173792.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
gi|89084354|gb|EAR63508.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
Length = 238
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ +Q ++Y + L++WN KMNLTA+ D EV +H DS+ S + D
Sbjct: 16 SLSPRQIDQYNIYYETLVEWNEKMNLTAITDKPEVYLKHFYDSV--------SAAFYFDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S L + DVG GAG P L + IA P+ VT+++S+NKR FLEH L NV+ V
Sbjct: 68 S--KPLHICDVGAGAGFPSLPIKIAFPEISVTIVDSLNKRINFLEHLAGKLGLENVRFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ +RE +DV ARAVA M +L E CLPL +VGG FVA KG Q+E+ +
Sbjct: 126 DRAETFGQNKEYREAFDVVTARAVARMSVLTELCLPLAKVGGHFVAMKGASAQDELAAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G L S +R V K + PKK+PR PGTP K P+
Sbjct: 186 KAITMLGGKLEDSHSFLLPEEESERNIFVIRKEKPAPKKFPRKPGTPNKSPI 237
>gi|420207794|ref|ZP_14713280.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM008]
gi|394275027|gb|EJE19419.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM008]
Length = 239
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 138/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSYTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|418412803|ref|ZP_12986054.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
epidermidis BVS058A4]
gi|410883864|gb|EKS31696.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
epidermidis BVS058A4]
Length = 239
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 138/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|407796871|ref|ZP_11143822.1| 16S rRNA methyltransferase GidB [Salimicrobium sp. MJ3]
gi|407018769|gb|EKE31490.1| 16S rRNA methyltransferase GidB [Salimicrobium sp. MJ3]
Length = 238
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q +Q Y + L++WN KMNLTA+ + EV E+H DSL T+
Sbjct: 17 LTEKQLDQFEKYWEMLVEWNEKMNLTAITEKGEVYEKHFYDSL----------TAAFYHD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L++ DVG GAG P L L I P+ KVT+++S+ KR FL H + +L +V
Sbjct: 67 FSGPLRICDVGAGAGFPSLPLKIVFPELKVTIVDSLKKRIGFLNHLATELELNDVAFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FRE+YD+ + RAVA M +L+E CLPLV+ GG +A KG + QEE+ +E
Sbjct: 127 RAENFGKNGKFREKYDLVLGRAVARMSVLSELCLPLVKKGGFLIAMKGPNAQEEMDTAES 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + S +R+ + K R+TP KYPR GTP KVPL
Sbjct: 187 AISILGGETKDVHSFTLPEDGAERSIIRIEKRRKTPGKYPRKAGTPNKVPL 237
>gi|420164553|ref|ZP_14671281.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM095]
gi|420169298|ref|ZP_14675900.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM087]
gi|394231447|gb|EJD77076.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM095]
gi|394231506|gb|EJD77133.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM087]
Length = 239
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 138/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|291541855|emb|CBL14965.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus bromii L2-63]
Length = 237
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 146/246 (59%), Gaps = 14/246 (5%)
Query: 44 TLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI 103
TLTT V L+ ++ +Y L++WN KMNLTA+ D + V +H DSL +
Sbjct: 6 TLTT---VTDGFKVKLDDEMLQRFEIYFKLLVEWNEKMNLTAITDEHGVAVKHFADSLTL 62
Query: 104 IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEH 163
+ N ++DVGTGAG PG+VL IA PD K+TLL+S+NKR FL+
Sbjct: 63 YNFV----------DVKKNASIIDVGTGAGFPGVVLKIARPDIKLTLLDSLNKRLTFLDT 112
Query: 164 AVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVA 223
++ T L + ++V RAE GK+ +RE++D+AV+RAVA + +L EYCLP V+VGGLFVA
Sbjct: 113 VLNDTGL-DSELVHSRAEEGGKNKLYREKFDIAVSRAVARLNVLCEYCLPYVKVGGLFVA 171
Query: 224 AKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGT 283
KG + EE+ +E A++L+G + ++ G+RT +V K + TPK+YPR G
Sbjct: 172 MKGPNADEELDGAENALKLLGGKVEKVYKFNLPCDEGERTIIVIKKVKPTPKQYPRISGK 231
Query: 284 PAKVPL 289
PL
Sbjct: 232 IKSQPL 237
>gi|319651093|ref|ZP_08005227.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
gi|317397263|gb|EFV77967.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
Length = 238
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y L++WN KMNLTA+ + +V +H DS+ S + D
Sbjct: 17 LSPQQLQQYDTYYSTLVEWNEKMNLTAITEKEDVYLKHFYDSI--------SAAFYFD-- 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LK+ DVG GAG P + + IA P +T+++S+NKR FLEH +L NV+ +
Sbjct: 67 FNQPLKVCDVGAGAGFPSIPIKIAFPGLHITIVDSLNKRIGFLEHLAKKLELDNVRFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ +RE +DV ARAVA + +L+E CLPL + GG FVA KG +EE+ ++
Sbjct: 127 RAETFGQNKEYRESFDVVTARAVARLSVLSELCLPLAKTGGTFVAMKGASAKEELDAGKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G +L+ + +R ++ K + TPKKYPR PGTP K P+
Sbjct: 187 AISVLGGTLVDSHTFTLPEEESERNILIIKKEKSTPKKYPRKPGTPNKTPI 237
>gi|218134366|ref|ZP_03463170.1| hypothetical protein BACPEC_02260 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989751|gb|EEC55762.1| 16S rRNA methyltransferase GidB [[Bacteroides] pectinophilus ATCC
43243]
Length = 248
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 146/246 (59%), Gaps = 1/246 (0%)
Query: 44 TLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI 103
++ T +N + E L+ +E + Y + L++WN+ MNLTA+ + ++V +H DSLA+
Sbjct: 4 SMNFTDALNEINVE-LDDSMEEALQKYYELLVEWNKVMNLTAITEKDDVYVKHFLDSLAV 62
Query: 104 IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEH 163
+ + N+ +K++D+GTGAG PG+ L IA P KVTLL+S+NKR FL
Sbjct: 63 KTVFDDKEYAKMLPDTNTAIKVIDIGTGAGFPGIPLKIAFPSVKVTLLDSLNKRIKFLNE 122
Query: 164 AVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVA 223
+S L +++ + GRAE ++ +RE YD+ V+RAVA + LAEYCLP V+ GG F++
Sbjct: 123 VISTVGLNDIEAIHGRAEDYAREPDYRESYDLCVSRAVATLSTLAEYCLPYVKTGGYFIS 182
Query: 224 AKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGT 283
K D +E+K + A++L+GA + + + +R+ V+ K T KKYPR G
Sbjct: 183 YKSGDIDDELKTATHALKLLGAKTIGVKKLTLPGTDIERSFVIIKKMAHTDKKYPRKAGL 242
Query: 284 PAKVPL 289
P+ PL
Sbjct: 243 PSSKPL 248
>gi|291529195|emb|CBK94781.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale M104/1]
Length = 237
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 20/236 (8%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TLN Q EQ LY D L++ N+ MNLTA+ D +EV+E+H DSL + +
Sbjct: 18 TLNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTL---------- 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N+ ++DVGTGAG PG+ L IA P K+TLL+S+NKR FL + +L +++ V
Sbjct: 68 DLNAEKNIIDVGTGAGFPGIPLKIAFPQLKITLLDSLNKRVGFLNEVIEALELKDIEAVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D R YD+ V+RAVA + L+EYCLP V++GG FV+ K + + EV +++
Sbjct: 128 GRAEDFARDKEHRAAYDICVSRAVANLSTLSEYCLPFVKMGGCFVSYKSGECESEVADAK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG----QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G L ++ FG R+ V+ K T KYPR G P+K PL
Sbjct: 188 SAIYLLGGKLNKI------EKFGYSDNHRSFVIIDKVMNTSNKYPRKAGLPSKKPL 237
>gi|238926046|ref|YP_002939564.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|238877723|gb|ACR77430.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|291526553|emb|CBK92140.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale DSM
17629]
Length = 237
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 20/236 (8%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TLN Q EQ LY D L++ N+ MNLTA+ D +EV+E+H DSL + +
Sbjct: 18 TLNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTL---------- 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N+ ++DVGTGAG PG+ L IA P K+TLL+S+NKR FL + +L +++ V
Sbjct: 68 DLNAEKNIIDVGTGAGFPGIPLKIAFPQLKITLLDSLNKRVGFLNEVIEALELKDIEAVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D R YD+ V+RAVA + L+EYCLP V++GG FV+ K + + EV +++
Sbjct: 128 GRAEDFARDKEHRAAYDICVSRAVANLSTLSEYCLPFVKMGGCFVSYKSGECESEVADAK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG----QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G L ++ FG R+ V+ K T KYPR G P+K PL
Sbjct: 188 SAIYLLGGKLNKI------EQFGYSDNHRSFVIIDKVMNTSNKYPRKAGLPSKKPL 237
>gi|408357768|ref|YP_006846299.1| ribosomal RNA small subunit methyltransferase G [Amphibacillus
xylanus NBRC 15112]
gi|407728539|dbj|BAM48537.1| ribosomal RNA small subunit methyltransferase G [Amphibacillus
xylanus NBRC 15112]
Length = 239
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q H+Y + L++WN KMNLTA+ + +EV +H DS+ T+
Sbjct: 17 LSEHQINQFHIYFETLVEWNEKMNLTAITEESEVYLKHFFDSI----------TASFYLD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++K+ DVG GAG P + L I P VT+++S+ KR FL H QL NV+
Sbjct: 67 LNQSIKICDVGAGAGFPSIPLKICFPQLHVTIVDSLKKRITFLNHLAEKLQLTNVEFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET ++ FR+ +D+ ARAVA+M +L E CLPLV+ G FVA KG + + E++ ++
Sbjct: 127 RAETFARNKRFRQSFDIVTARAVAKMAVLTELCLPLVKENGKFVALKGPNAEVELEEAKY 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L +++ G+R +V K + TPK YPR PGTP + PL
Sbjct: 187 AIKLLGGETKDLHTIQLPGDQGERNIIVIDKIKSTPKTYPRKPGTPNREPL 237
>gi|242243260|ref|ZP_04797705.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|420176474|ref|ZP_14682894.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM061]
gi|242233209|gb|EES35521.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|394241018|gb|EJD86439.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM061]
Length = 239
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKDTYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|416127542|ref|ZP_11596950.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
gi|418615282|ref|ZP_13178227.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU118]
gi|418631670|ref|ZP_13194122.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU128]
gi|418634915|ref|ZP_13197306.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU129]
gi|420178313|ref|ZP_14684645.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM057]
gi|420180880|ref|ZP_14687089.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM053]
gi|420190639|ref|ZP_14696580.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM037]
gi|420192464|ref|ZP_14698323.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM023]
gi|420200877|ref|ZP_14706516.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM031]
gi|420205723|ref|ZP_14711246.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM015]
gi|319399919|gb|EFV88165.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
gi|374817456|gb|EHR81636.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU118]
gi|374834338|gb|EHR97986.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU128]
gi|374836457|gb|EHS00045.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU129]
gi|394246503|gb|EJD91759.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM057]
gi|394248359|gb|EJD93597.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM053]
gi|394258572|gb|EJE03452.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM037]
gi|394261194|gb|EJE05994.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM023]
gi|394267473|gb|EJE12063.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM031]
gi|394269408|gb|EJE13942.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM015]
Length = 239
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKDTYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|166032901|ref|ZP_02235730.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
gi|166027258|gb|EDR46015.1| 16S rRNA methyltransferase GidB [Dorea formicigenerans ATCC 27755]
Length = 239
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q + + L++WN+ MNLT + + +EV+ +H DSL+I+ +
Sbjct: 19 LTDKQVSQFIKFYEMLVEWNKVMNLTGITEYDEVVMKHFVDSLSIVKV----------NG 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++ ++DVGTGAG PG+ L I P+ K+TLL+S+NKR FL + +L N++ + G
Sbjct: 69 FDNVTTIIDVGTGAGFPGIPLKIVFPEIKITLLDSLNKRIKFLNAVIDELELENIETIHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +REQYD+ V+RAVA + L+EYCLP V+VGG F+ K + EE+ NS++
Sbjct: 129 RAEDFSKKEDYREQYDLCVSRAVANLATLSEYCLPYVKVGGCFIPYKSGEIDEELNNSKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AVQ++G + ++ + R+ V K++ T KKYPR G PAK PL
Sbjct: 189 AVQILGGKIEEVVKFQLPDTDIGRSFVKIKKNKNTAKKYPRKAGLPAKEPL 239
>gi|313885633|ref|ZP_07819383.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619363|gb|EFR30802.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
Length = 239
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 139/231 (60%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++RQ +Q Y L++WN+K+NLTA+ + EV +H DSLA P+ + D +
Sbjct: 17 LDSRQIQQFESYYQFLVEWNQKINLTAITEQKEVYLKHFYDSLA---PLWLTDKIQADKA 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+G GAG P + LAIA P +VT+++S+NKR FLE V L VQ + G
Sbjct: 74 ------LIDIGAGAGFPSIPLAIAQPGLRVTIVDSLNKRIKFLEVLVEALGLDQVQALHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG+D +R+ +D+ ARAVA++ +LAEYCLP + GG F+A K Q E+ ++
Sbjct: 128 RAEDLGQDKRYRQNFDLVTARAVAQLNVLAEYCLPFAKKGGYFLALKAQKTQTEIDQAQA 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++GA L + S +RT VV K+ TP KYPR G PAK PL
Sbjct: 188 AIKVLGAKLEDVLSDVLPGQGDERTIVVIKKTLDTPNKYPRKAGKPAKQPL 238
>gi|417647446|ref|ZP_12297284.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
gi|329724143|gb|EGG60661.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
Length = 239
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|27469333|ref|NP_765970.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis ATCC
12228]
gi|251811359|ref|ZP_04825832.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874716|ref|ZP_06283595.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|417656828|ref|ZP_12306507.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
gi|417912680|ref|ZP_12556366.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU109]
gi|418608549|ref|ZP_13171742.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU057]
gi|418624221|ref|ZP_13186898.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU125]
gi|418629058|ref|ZP_13191573.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU127]
gi|418664976|ref|ZP_13226436.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU081]
gi|421608623|ref|ZP_16049839.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
AU12-03]
gi|29336633|sp|Q8CMN7.1|RSMG_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27316883|gb|AAO06058.1|AE016752_91 glucose inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251805108|gb|EES57765.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296432|gb|EFA88947.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|329735756|gb|EGG72037.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
gi|341657172|gb|EGS80865.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU109]
gi|374401236|gb|EHQ72315.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU057]
gi|374409757|gb|EHQ80532.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU081]
gi|374827945|gb|EHR91795.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU125]
gi|374834791|gb|EHR98426.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU127]
gi|406655783|gb|EKC82206.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
AU12-03]
Length = 239
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVNKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|410453621|ref|ZP_11307569.1| 16S rRNA methyltransferase GidB [Bacillus bataviensis LMG 21833]
gi|409932976|gb|EKN69924.1| 16S rRNA methyltransferase GidB [Bacillus bataviensis LMG 21833]
Length = 238
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q +Q Y L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 SLSDKQLDQFETYFSTLVEWNEKMNLTAITEKAEVYLKHFYDSI----------TASFYF 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P + L I P +VT+++S+NKR FL H ++ QL NV V
Sbjct: 66 DFTKPFHLCDVGAGAGFPSIPLKIVYPHIEVTIVDSLNKRISFLNHLANVLQLENVHFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G + ++RE +DV ARAVA M +L+E+CLPL +VGG F+A K ++E++ +
Sbjct: 126 DRAETFGVNPAYRESFDVVTARAVARMSVLSEFCLPLAKVGGHFIAMKALHAKDELEMGQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G + ++ + +R ++ K ++TPKKYPR PGTP K+P+
Sbjct: 186 KAITTLGGKVEKVHTFTLPMEDSERNILIIKKEKQTPKKYPRKPGTPGKMPI 237
>gi|418635525|ref|ZP_13197900.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
lugdunensis VCU139]
gi|374841792|gb|EHS05248.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
lugdunensis VCU139]
Length = 240
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H L +QQ Q Y L++WN KMNLT++ D ++V +H DS I P + +
Sbjct: 13 EHDIVLTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDS--ITPSFYHDF-- 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N L + DVG GAG P + L I P KVT+++S+NKR FL H S +L +V
Sbjct: 69 ------NQPLTVCDVGAGAGFPSIPLKIVYPTLKVTIVDSLNKRIQFLNHLASELELQDV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+ RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K EE+
Sbjct: 123 SFIHDRAETFGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGGEEL 181
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ ++G L + + G+R +V K R+T KKYPR PGTP K PL
Sbjct: 182 EEAQFAINVLGGKLAMTFNFDLPENAGERQMIVIDKQRQTAKKYPRKPGTPNKSPL 237
>gi|346309531|ref|ZP_08851616.1| 16S rRNA methyltransferase GidB [Dorea formicigenerans 4_6_53AFAA]
gi|345898736|gb|EGX68598.1| 16S rRNA methyltransferase GidB [Dorea formicigenerans 4_6_53AFAA]
Length = 239
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q + + L++WN+ MNLT + + +EV+ +H DSL+I+ +
Sbjct: 19 LTDKQVSQFIKFYEMLVEWNKVMNLTGITEYDEVVMKHFVDSLSIVKV----------NG 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++ ++DVGTGAG PG+ L I P+ K+TLL+S+NKR FL + +L N++ + G
Sbjct: 69 FDNVTSIIDVGTGAGFPGIPLKIVFPEIKITLLDSLNKRIKFLNAVIDELELENIETIHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +REQYD+ V+RAVA + L+EYCLP V+VGG F+ K + EE+ NS++
Sbjct: 129 RAEDFSKKEDYREQYDLCVSRAVANLATLSEYCLPYVKVGGCFMPYKSGEIDEELNNSKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AVQ++G + ++ + R+ V K++ T KKYPR G PAK PL
Sbjct: 189 AVQILGGKIEEVVKFQLPDTDIGRSFVKIKKNKNTAKKYPRKAGLPAKEPL 239
>gi|433463158|ref|ZP_20420722.1| 16S rRNA methyltransferase GidB [Halobacillus sp. BAB-2008]
gi|432187907|gb|ELK45145.1| 16S rRNA methyltransferase GidB [Halobacillus sp. BAB-2008]
Length = 238
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +QQ Q Y + L++WN KMNLTA+ D V +H DSL T+
Sbjct: 17 LDEKQQHQFQRYFEILVEWNEKMNLTAITDQEGVYLKHFYDSL----------TAAFYYD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L++ DVG GAG P L L IA P KVT+++S+ KR FL H +L +V
Sbjct: 67 FSKPLRICDVGAGAGFPSLPLKIAFPHLKVTIVDSLKKRITFLNHLAHELELDDVAFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ +FRE YD+ +ARAVA M +L+E CLPL GG F+A KG + +E++++
Sbjct: 127 RAENFGKNANFRESYDLVMARAVARMSVLSELCLPLTAKGGRFLAMKGPNLMDEMEDANI 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AVQ +G ++ + + E +R + K R+TPKKYPR GTP K P+
Sbjct: 187 AVQTVGGEVIDVHTFELPQEGSERNIAIIEKRRKTPKKYPRKAGTPNKTPI 237
>gi|289551829|ref|YP_003472733.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|385785377|ref|YP_005761550.1| putative glucose inhibited division protein B [Staphylococcus
lugdunensis N920143]
gi|418415567|ref|ZP_12988772.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289181360|gb|ADC88605.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|339895633|emb|CCB54963.1| putative glucose inhibited division protein B [Staphylococcus
lugdunensis N920143]
gi|410875023|gb|EKS22953.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 240
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H L +QQ Q Y L++WN KMNLT++ D ++V +H DS I P + +
Sbjct: 13 EHDIVLTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDS--ITPSFYHDF-- 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N L + DVG GAG P + L I P KVT+++S+NKR FL H S +L +V
Sbjct: 69 ------NQPLTVCDVGAGAGFPSIPLKIVYPALKVTIVDSLNKRIQFLNHLASELELQDV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+ RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K EE+
Sbjct: 123 SFIHDRAETFGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGGEEL 181
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ ++G L + + G+R +V K R+T KKYPR PGTP K PL
Sbjct: 182 EEAQFAINVLGGKLAMTFNFDLPENAGERQMIVIDKQRQTAKKYPRKPGTPNKSPL 237
>gi|315660000|ref|ZP_07912858.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
gi|315494901|gb|EFU83238.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
Length = 240
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H L +QQ Q Y L++WN KMNLT++ D ++V +H DS I P + +
Sbjct: 13 EHDIVLTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDS--ITPSFYHDF-- 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N L + DVG GAG P + L I P KVT+++S+NKR FL H S +L +V
Sbjct: 69 ------NQPLTVCDVGAGAGFPSIPLKIVYPALKVTIVDSLNKRIQFLNHLASELELQDV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+ RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K EE+
Sbjct: 123 SFIHDRAETFGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGGEEL 181
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ ++G L + + G+R +V K R+T KKYPR PGTP K PL
Sbjct: 182 EEAQFAINVLGGKLATTFNFDLPENAGERQMIVIDKQRQTAKKYPRKPGTPNKSPL 237
>gi|417643958|ref|ZP_12293980.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
warneri VCU121]
gi|445060702|ref|YP_007386106.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri SG1]
gi|330685280|gb|EGG96941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU121]
gi|443426759|gb|AGC91662.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri SG1]
Length = 239
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 134/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN KMNLT++ D +EV +H DS I P +
Sbjct: 17 LSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L + DVG GAG P + L I P+ KVT+++S+NKR FL H L +V V
Sbjct: 68 -KGSLSICDVGAGAGFPSIPLKIIFPELKVTIVDSLNKRIQFLNHLADALGLQDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE+ ++
Sbjct: 127 RAETFGKG-DYRESYDIVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGEEELDEAQF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R +V K R+T KKYPR PGTP K PL
Sbjct: 186 AINVLGGNVKETFNFELPEEAGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|260588825|ref|ZP_05854738.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
gi|260540604|gb|EEX21173.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
Length = 240
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q++Q Y + L++WN+ MNLT + D EV+ +H DSL+I + + S C
Sbjct: 19 LNEEQKKQFVQYYELLIEWNKVMNLTGITDFEEVLLKHFVDSLSIAKGLDMTKISTC--- 75
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+DVGTGAG PG+ L IA P ++TLL+S+NKR FL + L +Q V G
Sbjct: 76 -------IDVGTGAGFPGIPLKIAFPHLQITLLDSLNKRLNFLNEVIEKLGLSGIQTVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + RE+YD++V+RAV+ + L+EYC+P V+ GG FV+ K EEV +++
Sbjct: 129 RAEDAARKAEHREKYDLSVSRAVSRLASLSEYCMPYVKAGGYFVSYKSGKAAEEVSEAKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L + + RT V+ K + TPKKYPR GTP K P+
Sbjct: 189 AISVLGGRLEKEVDFKLYQTDMDRTLVMIKKVKSTPKKYPRKAGTPTKEPI 239
>gi|366163650|ref|ZP_09463405.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
Length = 264
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 13/259 (5%)
Query: 32 QNTFCPHRTRAKTLTTTRIVNSSHFET-LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVN 90
+N C L I ++ F LN Q E+ Y + L +WN K+NLTA++D
Sbjct: 17 KNGDCVVDNVDNELKNLLIAGANEFNIPLNEEQAEKFFKYKNVLKEWNEKINLTAIEDDR 76
Query: 91 EVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTL 150
+++ +H DSL+I+P IK N+KL+DVGTGAG PG+ + IA +VTL
Sbjct: 77 DIIIKHFIDSLSILPLIKGD-----------NIKLIDVGTGAGFPGIPVKIARESIEVTL 125
Query: 151 LESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEY 210
L+S++KR FL + L ++ + GRAE FRE+YD+ ARAVA + +L EY
Sbjct: 126 LDSLDKRVKFLNEVIKEDGLTGIKALHGRAEEKAVLPEFREKYDICTARAVASLPVLIEY 185
Query: 211 CLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270
CLP V+VGG F+A KG EE+ +S++A+ ++G + ++ +R +V K
Sbjct: 186 CLPFVKVGGCFIAMKGSS-TEEIDSSKKALDIIGGKIEEVKDFNLPFTDSKRNVIVIRKF 244
Query: 271 RRTPKKYPRDPGTPAKVPL 289
R+TP KYPR G P+K PL
Sbjct: 245 RQTPTKYPRKAGKPSKEPL 263
>gi|420202675|ref|ZP_14708265.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM018]
gi|394269216|gb|EJE13754.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM018]
Length = 239
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAEIYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|420186249|ref|ZP_14692321.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM040]
gi|420211492|ref|ZP_14716851.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM001]
gi|394252614|gb|EJD97643.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM040]
gi|394280827|gb|EJE25098.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM001]
Length = 239
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAVELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKDTYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|307104809|gb|EFN53061.1| hypothetical protein CHLNCDRAFT_58678 [Chlorella variabilis]
Length = 1697
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 117/151 (77%)
Query: 124 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 183
+L+DVG+GAGLPG++LAIA PDW+VTLL+S+ KRC F E AV L NV++ GRAE
Sbjct: 281 RLIDVGSGAGLPGIILAIARPDWEVTLLDSLQKRCRFAEAAVEAAGLANVRVHWGRAEEA 340
Query: 184 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLM 243
G+D + R+Q+DVA+ARAVAE+R+LAE CLPLVR GG +VAAKG PQ+EV + A+ M
Sbjct: 341 GQDPALRQQHDVAIARAVAELRVLAELCLPLVRPGGHWVAAKGAAPQDEVAAAAGAIGKM 400
Query: 244 GASLLQLCSVESQSPFGQRTAVVCLKSRRTP 274
G LL + V+S+SP G+RTA+V LK+R+TP
Sbjct: 401 GGKLLGVEEVDSESPEGRRTAIVVLKARQTP 431
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPI 107
+ L QQ+Q+ +VD LL WN++MNLTA+KD E ERH++DSLA++P +
Sbjct: 156 YAGLPPEQQQQVDAFVDILLDWNQRMNLTAIKDRGECYERHVNDSLALLPAL 207
>gi|336115644|ref|YP_004570411.1| methyltransferase GidB [Bacillus coagulans 2-6]
gi|335369074|gb|AEH55025.1| methyltransferase GidB [Bacillus coagulans 2-6]
Length = 238
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y + L+ WN KMNLTA+ + EV +H DSL T+ +
Sbjct: 17 LSGEQKQQFETYYEWLVDWNNKMNLTAITEKGEVYLKHFYDSL----------TAAFFTD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L + DVG GAG PG+ L I P+ ++++++S+ KR FL H L V +
Sbjct: 67 FNGPLHVCDVGAGAGFPGIPLKICFPEIRLSIVDSLQKRITFLGHLTEALGLKQVFLFHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET K REQYDV ARAVA M +L+E CLPLV+ GG F+A K +EE++ +E+
Sbjct: 127 RAETFAKKPEHREQYDVVTARAVARMSVLSELCLPLVKPGGRFIAMKAQHAKEELEKAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + + +R +V K + TPKKYPR PGTPAK+PL
Sbjct: 187 AIRLLGGQTENVYNFTLPVEESERNLIVVKKVKETPKKYPRKPGTPAKLPL 237
>gi|57865944|ref|YP_187605.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis RP62A]
gi|293367586|ref|ZP_06614239.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417659166|ref|ZP_12308776.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
gi|417909212|ref|ZP_12552951.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU037]
gi|417911912|ref|ZP_12555609.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU105]
gi|418604521|ref|ZP_13167868.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU041]
gi|418612376|ref|ZP_13175420.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU117]
gi|418617364|ref|ZP_13180262.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU120]
gi|418621968|ref|ZP_13184730.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU123]
gi|418626544|ref|ZP_13189142.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU126]
gi|419769950|ref|ZP_14296038.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-250]
gi|419770759|ref|ZP_14296825.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-K]
gi|420172904|ref|ZP_14679401.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM067]
gi|420181851|ref|ZP_14688010.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM049]
gi|420194341|ref|ZP_14700156.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM021]
gi|420197585|ref|ZP_14703308.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM020]
gi|420215364|ref|ZP_14720633.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05005]
gi|420216536|ref|ZP_14721743.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05001]
gi|420219940|ref|ZP_14724933.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04008]
gi|420222767|ref|ZP_14727682.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH08001]
gi|420224644|ref|ZP_14729484.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH06004]
gi|420227724|ref|ZP_14732488.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05003]
gi|420230705|ref|ZP_14735384.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04003]
gi|420233023|ref|ZP_14737645.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051668]
gi|71152076|sp|Q5HS34.1|RSMG_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57636602|gb|AAW53390.1| glucose-inhibited division protein B [Staphylococcus epidermidis
RP62A]
gi|291318299|gb|EFE58692.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736094|gb|EGG72367.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
gi|341651669|gb|EGS75466.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU105]
gi|341653803|gb|EGS77569.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU037]
gi|374404744|gb|EHQ75712.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU041]
gi|374818657|gb|EHR82807.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU120]
gi|374819678|gb|EHR83798.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU117]
gi|374828038|gb|EHR91885.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU123]
gi|374831614|gb|EHR95351.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis VCU126]
gi|383357632|gb|EID35099.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-250]
gi|383362586|gb|EID39933.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-K]
gi|394241170|gb|EJD86588.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM067]
gi|394250958|gb|EJD96089.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM049]
gi|394264918|gb|EJE09586.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM021]
gi|394265686|gb|EJE10337.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM020]
gi|394282340|gb|EJE26541.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05005]
gi|394287210|gb|EJE31175.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04008]
gi|394288721|gb|EJE32625.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH08001]
gi|394291797|gb|EJE35583.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05001]
gi|394294494|gb|EJE38173.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH06004]
gi|394296127|gb|EJE39757.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH04003]
gi|394296575|gb|EJE40200.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH05003]
gi|394300583|gb|EJE44077.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051668]
Length = 239
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAEIYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETHTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|420166081|ref|ZP_14672769.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM088]
gi|420170944|ref|ZP_14677499.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM070]
gi|420209614|ref|ZP_14715050.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM003]
gi|394234136|gb|EJD79721.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM088]
gi|394239314|gb|EJD84759.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM070]
gi|394278511|gb|EJE22826.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM003]
Length = 239
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAEIYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETHTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|420188880|ref|ZP_14694881.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM039]
gi|394253839|gb|EJD98829.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIHLM039]
Length = 239
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAEIYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETHTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|260584386|ref|ZP_05852133.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
gi|260157904|gb|EEW92973.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
Length = 237
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 135/235 (57%), Gaps = 11/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H TL Q++Q H Y L++WN KMNLTA+ D V +H DSLA+ H
Sbjct: 14 HGITLTDVQKKQFHQYFQLLVEWNEKMNLTAITDEEGVYLKHFYDSLAL--------GFH 65
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
+ S N L DVG GAG P + L I PD KVT+++S+NKR FL V L +VQ
Sbjct: 66 HELS---NQTLCDVGAGAGFPSIPLKIVFPDLKVTIVDSLNKRITFLNTLVETLGLTDVQ 122
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAET G++ +FR YDV ARAVA++ +L+E+C+PLV+ G F+A K + E++
Sbjct: 123 CFHDRAETFGQNKNFRASYDVVTARAVAKLSVLSEFCMPLVKKQGYFLALKAAHTEVELE 182
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++A+ ++G + S + G R V LK++ TP KYPR PG P K PL
Sbjct: 183 EAKKAIAILGGKVEDDVSFDLPYEGGNRHVVTILKTKETPNKYPRKPGIPLKKPL 237
>gi|266620966|ref|ZP_06113901.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
gi|288867388|gb|EFC99686.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
Length = 243
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 132/231 (57%), Gaps = 8/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q + Y + L +WN+ MNLTA+ D EV+ +H DSLA++ + T
Sbjct: 20 LENSQINQFYQYYELLDEWNKVMNLTAITDQKEVITKHFVDSLALVKAMGEISTKEY--- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTGAG PG+ L IA P K+TL++S+NKR FL + L + V
Sbjct: 77 -----KIIDIGTGAGFPGIPLKIAFPQLKITLMDSLNKRIKFLNEVIEQLGLKEITAVHS 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG+D +REQYD++V+RAVA + L+EYC+P V+ GG F++ K +EE+ +++
Sbjct: 132 RAEDLGRDKDYREQYDLSVSRAVANLSTLSEYCMPFVKPGGFFISYKSGKIEEELSSAKH 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G + + S +RT + K KKYPR G P K PL
Sbjct: 192 AIFLLGGKVNGIESFTLDGAEAERTLIKIEKVSEISKKYPRKAGVPGKEPL 242
>gi|397905898|ref|ZP_10506732.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Caloramator australicus RC3]
gi|397161066|emb|CCJ34067.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Caloramator australicus RC3]
Length = 238
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 135/236 (57%), Gaps = 10/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
S+ TL+ +Q + +Y+ L +WN K+NLTA+ D E++++H DS++I+
Sbjct: 12 SYGITLDDKQMDMFEIYMRLLKEWNEKINLTAITDDEEIVKKHFLDSISIVKS------- 64
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N NLK++DVGTGAG PG+ L I P K+TLL+S+ KR FL + L ++
Sbjct: 65 ---GLINDNLKIIDVGTGAGFPGIPLKIINPSLKITLLDSLKKRISFLIDVIQNLGLKDI 121
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+ V GRAE + FRE +D+A ARAVA M +L+EYC+P V+V G FVA KG +EE+
Sbjct: 122 EAVHGRAEDFARKDDFRESFDIATARAVAHMNVLSEYCMPYVKVKGYFVAMKGPSIEEEI 181
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ A+ +G L+ + + ++ K + T KKYPR P K P+
Sbjct: 182 NESKNAIGTLGGKLIDIITTSIPEYDMDHKLIIVEKIKPTDKKYPRKPAQIEKKPI 237
>gi|402300236|ref|ZP_10819763.1| 16S rRNA methyltransferase GidB [Bacillus alcalophilus ATCC 27647]
gi|401724626|gb|EJS97971.1| 16S rRNA methyltransferase GidB [Bacillus alcalophilus ATCC 27647]
Length = 239
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC-DS 117
LN +QQ Q Y + L++WN KMNLTA+ +V +H DS+ S C
Sbjct: 17 LNEKQQWQFQRYFEVLVEWNEKMNLTALTSEEDVYLKHFYDSI-----------SACFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S ++DVG GAG P L + I P V +++S+NKR FLEH + +L NV+
Sbjct: 66 SFKEGQNIIDVGAGAGFPSLPIKIIHPGLNVHIVDSLNKRIGFLEHLANELELENVKFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK+ + RE+YD+ +ARAVA M +L+E CLPLV+VGG FVA KG QEE+
Sbjct: 126 DRAELFGKNANHREKYDLVMARAVARMSVLSELCLPLVKVGGDFVALKGASSQEELSEGL 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G ++ E R V+ K R+T KKYPR PGTP K PL
Sbjct: 186 FAIETLGGRVIDSFQFELPEEKSDRHIVIIKKERKTAKKYPRKPGTPNKQPL 237
>gi|418328444|ref|ZP_12939556.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|365231969|gb|EHM72985.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
epidermidis 14.1.R1.SE]
Length = 239
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K + E++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGEVELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVKETYTFELPENAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|410458109|ref|ZP_11311872.1| 16S rRNA methyltransferase GidB [Bacillus azotoformans LMG 9581]
gi|409931737|gb|EKN68713.1| 16S rRNA methyltransferase GidB [Bacillus azotoformans LMG 9581]
Length = 238
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 132/238 (55%), Gaps = 22/238 (9%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++RQ EQ LY + L++WN KMNLT++ D EV +H DS+ T+
Sbjct: 16 SLSSRQLEQFDLYYNTLVEWNEKMNLTSITDKPEVYLKHFYDSI----------TAAFYF 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
K+ DVG GAG P + L I P +++++S+ KR FL S QL V
Sbjct: 66 DFTKEYKICDVGAGAGFPSIPLKICFPHLSISIVDSLQKRITFLNELASTLQLDQVTFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA M +L+E C+PL +VGG F+ KG + EE+ +
Sbjct: 126 DRAETFGKRPEIRESYDIVMARAVARMSVLSELCIPLAKVGGYFIGMKGANLAEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF------GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G C VES F +R V+ K R+TP KYPR PGTP K P+
Sbjct: 186 KAIEVLG------CKVESIHNFQLPIENSERNIVILKKERKTPNKYPRKPGTPNKTPI 237
>gi|255657631|ref|ZP_05403040.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-23m63]
gi|296452688|ref|ZP_06894379.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296880060|ref|ZP_06904029.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
gi|296258470|gb|EFH05374.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296428927|gb|EFH14805.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
Length = 239
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 136/230 (59%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N E+ +Y + L+ WN+KMNLT ++D EV +H DS I +KN Y +
Sbjct: 19 NDSMLEKFKIYREILIDWNKKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN----- 70
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ ++DVGTGAG PG+ L I ++TLL+S+NKR FLE + +L N++ + GR
Sbjct: 71 --GMSIIDVGTGAGFPGIPLKICLDRLELTLLDSLNKRINFLEEVSRVLELDNIKFIHGR 128
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE GK+ ++RE+YDVA ARAVA + IL E+C+P V+VGG F+ KG + E++ S++A
Sbjct: 129 AEDFGKNENYREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKA 188
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G ++ VE +V K TP KYPR G PAK P+
Sbjct: 189 IDVLGLEYIEKIDVELPEIDLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|314934965|ref|ZP_07842324.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
gi|313652895|gb|EFS16658.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
Length = 239
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 138/237 (58%), Gaps = 11/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L+ Q+EQ Y L++WN KMNLT++ + ++V +H DS I P +
Sbjct: 11 SEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDS--ITPSFYYDF- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ L + DVG GAG P + L I P+ KVT+++S+NKR FL H + L +
Sbjct: 68 -------DGELSICDVGAGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAAELGLQD 120
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V V RAE+ GK ++RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE
Sbjct: 121 VSFVHDRAESYGKG-AYRESYDIVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGEEE 179
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + A+ ++G ++ + S E G+R +V K R+T KKYPR PGTP K PL
Sbjct: 180 LQEANFAINILGGNVKETFSFELPEDAGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|257429505|ref|ZP_05605892.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
gi|257279986|gb|EEV10573.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
Length = 239
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NK FL + S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKCIQFLNYLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPL 236
>gi|239637281|ref|ZP_04678268.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
gi|239597118|gb|EEQ79628.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
Length = 239
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN KMNLT++ D +EV +H DS I P +
Sbjct: 17 LSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L + DVG GAG P + L I P+ KVT+++S+NKR FL H L +V V
Sbjct: 68 -KGSLSICDVGAGAGFPSIPLKIIFPELKVTIVDSLNKRIQFLNHLADALGLQDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK +RE YD+ ARAVA + +L+E CLPL + GG F+A K +EE+ ++
Sbjct: 127 RAETFGKG-DYRESYDIVTARAVARLTVLSELCLPLAKKGGQFIALKSSKGEEELDEAQF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R +V K R+T KKYPR PGTP K PL
Sbjct: 186 AINVLGGNVKETFNFELPEEAGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|255308712|ref|ZP_05352883.1| 16S rRNA methyltransferase GidB [Clostridium difficile ATCC 43255]
Length = 239
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N E+ +Y + L++WN+KMNLT ++D EV +H DS I +KN Y +
Sbjct: 19 NDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN----- 70
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ ++DVGTGAG PG+ L I ++TLL+S+NKR FLE + +L N+ + GR
Sbjct: 71 --GMSIIDVGTGAGFPGIPLKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGR 128
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE GK+ +RE+YDVA ARAVA + IL E+C+P V+VGG F+ KG + E++ S++A
Sbjct: 129 AEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKA 188
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G ++ VE +V K TP KYPR G PAK P+
Sbjct: 189 IDVLGLEYIEKIDVELPEVDLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|423082984|ref|ZP_17071566.1| 16S rRNA methyltransferase GidB [Clostridium difficile
002-P50-2011]
gi|423086508|ref|ZP_17074913.1| 16S rRNA methyltransferase GidB [Clostridium difficile
050-P50-2011]
gi|357546712|gb|EHJ28621.1| 16S rRNA methyltransferase GidB [Clostridium difficile
050-P50-2011]
gi|357547063|gb|EHJ28962.1| 16S rRNA methyltransferase GidB [Clostridium difficile
002-P50-2011]
Length = 239
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N E+ +Y + L+ WN+KMNLT ++D EV +H DS I +KN Y +
Sbjct: 19 NDSMLEKFKIYREILVDWNKKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN----- 70
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ ++DVGTGAG PG+ L I ++TLL+S+NKR FLE + +L NV + GR
Sbjct: 71 --GMSIIDVGTGAGFPGIPLKICLDSLELTLLDSLNKRINFLEEVSRVLELDNVTFIHGR 128
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE GK+ ++RE+YDVA ARAVA + IL E+C+P V+VGG F+ KG + E++ S++A
Sbjct: 129 AEDFGKNENYREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKA 188
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G ++ VE +V K TP KYPR G PAK P+
Sbjct: 189 IDVLGLEYIEKIDVELPEIDLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|70727673|ref|YP_254589.1| 16S rRNA methyltransferase GidB [Staphylococcus haemolyticus
JCSC1435]
gi|82592865|sp|Q4L2Z4.1|RSMG_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68448399|dbj|BAE05983.1| glucose inhibited division protein B [Staphylococcus haemolyticus
JCSC1435]
Length = 240
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%), Gaps = 11/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L+ +Q+EQ Y L++WN KMNLT++ D +EV +H DS I P +
Sbjct: 12 SEHGIELSDKQKEQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDS--ITPSFYYDF- 68
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N L + DVG GAG P + L + P+ KVT+++S+NKR FL H + L
Sbjct: 69 -------NQPLTICDVGAGAGFPSIPLKVVYPELKVTIVDSLNKRIQFLNHLAAELGLTQ 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V V RAET GK V+ RE YDV ARAVA + +L+E CLPLV+ GG F+A K +EE
Sbjct: 122 VSFVHDRAETFGKGVN-RETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGEEE 180
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ ++ + ++G + + G+R ++ K R+T KKYPR PGTP K PL
Sbjct: 181 LEEAQFGISILGGVFSDSYTFDLPEDAGERQMIIIDKRRQTSKKYPRKPGTPNKSPL 237
>gi|420235735|ref|ZP_14740271.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051475]
gi|394302404|gb|EJE45849.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
NIH051475]
Length = 239
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN+KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA--PSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L D+G GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -NGQLSLCDIGAGAGFPSIPLKIVYPELKVTIVDSLNKRIQFLNHLAAELGLEDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETYGKGV-YRESYDIVTARAVARLTVLSELCLPLVKKGGQFLALKSSKGKEELQEATF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E G+R ++ K R+T KKYPR GTP K PL
Sbjct: 186 AINILGGNVKDTYTFELPENAGERQMIIIDKRRQTSKKYPRKSGTPNKSPL 236
>gi|170016607|ref|YP_001727526.1| 16S rRNA methyltransferase GidB [Leuconostoc citreum KM20]
gi|414596685|ref|ZP_11446259.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE E16]
gi|193806446|sp|B1MX30.1|RSMG_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169803464|gb|ACA82082.1| Methyltransferase GidB [Leuconostoc citreum KM20]
gi|390482706|emb|CCF28320.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE E16]
Length = 239
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q EQ Y + L++ N++ NLTA+ D +V +H DSL + +K H S
Sbjct: 16 TLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSS 73
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV
Sbjct: 74 T------LIDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + +
Sbjct: 128 GRAEDIGQNVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G +L + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 188 QALATLGGTL--SSAFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPI 238
>gi|167766872|ref|ZP_02438925.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|317499287|ref|ZP_07957560.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|429761603|ref|ZP_19294026.1| 16S rRNA methyltransferase GidB [Anaerostipes hadrus DSM 3319]
gi|167711420|gb|EDS21999.1| 16S rRNA methyltransferase GidB [Clostridium sp. SS2/1]
gi|291558411|emb|CBL37211.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SSC/2]
gi|316893456|gb|EFV15665.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|429183510|gb|EKY24558.1| 16S rRNA methyltransferase GidB [Anaerostipes hadrus DSM 3319]
Length = 236
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q EQ Y + L++ N+ MNLTA+ + NEV+++H DSLA+I
Sbjct: 15 LSDHQLEQFETYYEMLVEKNKVMNLTAITEKNEVIDKHFADSLALIK----------SGV 64
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ K++D+GTGAG PG+ L IA P+ ++ LL+S+NKR FL + L + + G
Sbjct: 65 SLTGQKILDIGTGAGFPGIPLKIAFPELEIVLLDSLNKRIKFLNEVIEALGLEKITAIHG 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +REQ+D V+RAVA + +L+EYCLP V+ G F+ K D +EE NS++
Sbjct: 125 RAEDFAKQKEYREQFDYVVSRAVANLTVLSEYCLPYVKEDGYFLPYKSGDIKEEAANSKK 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G S+ + S E RT + K++ TPK++PR G P K P+
Sbjct: 185 AVKILGGSIEDIISFEIPDTDMARTILKIHKTKATPKRFPRKAGLPTKEPI 235
>gi|254977335|ref|ZP_05273807.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-66c26]
gi|255094666|ref|ZP_05324144.1| 16S rRNA methyltransferase GidB [Clostridium difficile CIP 107932]
gi|255316419|ref|ZP_05358002.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-76w55]
gi|255519079|ref|ZP_05386755.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-97b34]
gi|255652262|ref|ZP_05399164.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-37x79]
gi|306521977|ref|ZP_07408324.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-32g58]
gi|384362903|ref|YP_006200755.1| 16S rRNA methyltransferase GidB [Clostridium difficile BI1]
Length = 239
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N E+ +Y + L++WN+KMNLT ++D EV +H DS I +KN Y +
Sbjct: 19 NDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN----- 70
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ ++DVGTGAG PG+ L I ++TLL+S+NKR FLE + +L N+ + GR
Sbjct: 71 --GMSIIDVGTGAGFPGIPLKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGR 128
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE GK+ +RE+YDVA ARAVA + IL E+C+P V+VGG F+ KG + E++ S++A
Sbjct: 129 AEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKA 188
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G ++ VE +V K TP KYPR G PAK P+
Sbjct: 189 IDVLGLEYIEKIDVELPEVDLNHNILVFKKVMETPVKYPRKAGRPAKNPI 238
>gi|260685216|ref|YP_003216501.1| 16S rRNA methyltransferase GidB [Clostridium difficile CD196]
gi|260688875|ref|YP_003220009.1| 16S rRNA methyltransferase GidB [Clostridium difficile R20291]
gi|260211379|emb|CBA67032.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile CD196]
gi|260214892|emb|CBE07696.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile R20291]
Length = 242
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N E+ +Y + L++WN+KMNLT ++D EV +H DS I +KN Y +
Sbjct: 22 NDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN----- 73
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ ++DVGTGAG PG+ L I ++TLL+S+NKR FLE + +L N+ + GR
Sbjct: 74 --GMSIIDVGTGAGFPGIPLKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGR 131
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE GK+ +RE+YDVA ARAVA + IL E+C+P V+VGG F+ KG + E++ S++A
Sbjct: 132 AEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKA 191
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G ++ VE +V K TP KYPR G PAK P+
Sbjct: 192 IDVLGLEYIEKIDVELPEVDLNHNILVFKKVMETPVKYPRKAGRPAKNPI 241
>gi|345020622|ref|ZP_08784235.1| 16S rRNA methyltransferase GidB [Ornithinibacillus scapharcae TW25]
Length = 238
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ RQ EQ H+Y L++WN K+NLTA+ D +V +H DS++ + +T
Sbjct: 16 NLSERQLEQFHIYYKTLVEWNEKINLTALTDEEDVYLKHFYDSIS--AAFYHDFTKEQ-- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ DVG GAG P + + I P KVT+++S+ KR FL H S +L +V
Sbjct: 72 ------HICDVGAGAGFPSIPIKICFPHLKVTIVDSLQKRIGFLNHLASQLELSDVAFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK+ FRE YD +ARAVA M +L+E CLPLV+ G F+A KG EE++ ++
Sbjct: 126 DRAETFGKNGKFRESYDTVMARAVARMSVLSELCLPLVKKNGTFIAMKGSQANEELQLAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + + R+ V+ K R+TPKKYPR PGTP K P+
Sbjct: 186 NAIEILGGEVDSNHTFSLPEENSDRSIVIISKKRQTPKKYPRKPGTPNKEPI 237
>gi|415883905|ref|ZP_11545934.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus MGA3]
gi|387591700|gb|EIJ84017.1| 16S rRNA methyltransferase GidB [Bacillus methanolicus MGA3]
Length = 238
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 139/232 (59%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q +Q Y L++WN KMNLTA+ + NEV +H DS+ T+
Sbjct: 16 SLSQQQLDQYETYYQTLVEWNEKMNLTAITEKNEVYLKHFYDSI----------TAAFYF 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L++ DVG GAG P + L IA PD +T+++S+NKR FLEH + QL NVQ +
Sbjct: 66 DFQQPLRVCDVGAGAGFPSIPLKIAFPDLHITIVDSLNKRITFLEHLGKVLQLKNVQFIH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YDV ARAVA+M +L+E CLPLV++ G F+A K EE++ ++
Sbjct: 126 DRAETFGQKKEHRESYDVVTARAVAKMSVLSELCLPLVKLSGTFIAMKAASANEELEAAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G SL + S +R ++ K ++TPKKYPR PGTP K P+
Sbjct: 186 KAISVLGGSLQSVHSFRLPLEESERNILIIKKEKKTPKKYPRKPGTPNKTPI 237
>gi|229829505|ref|ZP_04455574.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
gi|229791936|gb|EEP28050.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
Length = 241
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 138/233 (59%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q + Y D L++WN++MNLT + + EV+ +H DSL+I S+
Sbjct: 19 LSEHQYQSFLTYYDMLIEWNKRMNLTTITEYQEVVSKHFLDSLSI-------------SN 65
Query: 119 CNSNL--KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
S L KL+D+GTGAG PG+ L I PD K+TL++S+NKR FL+ + + N++ +
Sbjct: 66 ICSGLEGKLLDLGTGAGFPGIPLKIVYPDLKITLMDSLNKRIRFLQEVIDRLEFKNIEAI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE + + +RE YD V+RAVA + L+EYCLP VR GG F+A K +EE+
Sbjct: 126 HGRAEEMSRQKKYRESYDHVVSRAVANISTLSEYCLPFVREGGDFIAYKSGQIEEELNEG 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++L+G + ++ + R+ V+ K+++TPK YPR GTP+K PL
Sbjct: 186 KFGIRLLGGKIERVEQFTLPNSDFSRSLVMIRKTKKTPKTYPRKAGTPSKNPL 238
>gi|255102892|ref|ZP_05331869.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-63q42]
gi|423088755|ref|ZP_17077129.1| 16S rRNA methyltransferase GidB [Clostridium difficile 70-100-2010]
gi|357559161|gb|EHJ40621.1| 16S rRNA methyltransferase GidB [Clostridium difficile 70-100-2010]
Length = 239
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 134/230 (58%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N E+ +Y + L+ WN+KMNLT ++D EV +H DS I +KN Y +
Sbjct: 19 NDSMLEKFKIYREILVDWNKKMNLTGIEDEKEVYIKHFLDS---ISAVKNGYIKN----- 70
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ ++DVGTGAG PG+ L I ++TLL+S+NKR FLE + +L N+ + GR
Sbjct: 71 --GMSIIDVGTGAGFPGIPLKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGR 128
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE GK+ +RE+YDVA ARAVA + IL E+C+P V+VGG F+ KG + E++ S++A
Sbjct: 129 AEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKA 188
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G ++ VE +V K TP KYPR G PAK P+
Sbjct: 189 IDVLGLEYIEKIDVELPEVDLNHNILVFKKVMETPVKYPRKAGKPAKNPI 238
>gi|23100944|ref|NP_694411.1| 16S rRNA methyltransferase GidB [Oceanobacillus iheyensis HTE831]
gi|29336682|sp|Q8EKU4.1|RSMG_OCEIH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22779179|dbj|BAC15445.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
Length = 238
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ +Q EQ ++Y L++WN+K+NLTA+ D EV +H D + T+
Sbjct: 16 NLSEKQTEQFYIYFQELVEWNQKVNLTAITDQEEVYVKHFYDCV----------TAAFYH 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + + D+G GAG P + L I P K+T+++S+ KR FL H + +L NV
Sbjct: 66 DFNQEISICDIGAGAGFPSIPLKIVFPQLKITIVDSLKKRITFLNHLATKLELSNVAFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK+ +FRE +D+ ARAVA M +L+E CLPLV+ G+F+A KG +EE++ +
Sbjct: 126 DRAENFGKNKTFRESFDIVTARAVARMSVLSELCLPLVKKNGVFIAMKGAQAKEELEVGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + ++ + +R+ ++ K R+TPKKYPR G P K P+
Sbjct: 186 PAIELLGGEVEEIHTFSLPIEESERSIILISKKRQTPKKYPRKAGLPNKEPI 237
>gi|418324523|ref|ZP_12935760.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
pettenkoferi VCU012]
gi|365225940|gb|EHM67176.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
pettenkoferi VCU012]
Length = 238
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 137/242 (56%), Gaps = 12/242 (4%)
Query: 48 TRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPI 107
TR + E L +QQ+Q Y + L++WN KMNLT++ + +EV +H DS++ P
Sbjct: 7 TRALKEHDIE-LTEQQQDQFKQYYEMLVEWNEKMNLTSITEESEVYLKHFYDSIS--PSF 63
Query: 108 KNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL 167
+ N L + DVG GAG P + L I P+ KVT+++S+NKR FL
Sbjct: 64 FEDF--------NQPLTICDVGAGAGFPSVPLKIVFPELKVTIVDSLNKRIQFLNQLADQ 115
Query: 168 TQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGH 227
L V V RAE+ GK +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K
Sbjct: 116 LGLTGVSFVHDRAESYGKG-DYRESYDIVTARAVARLSVLSELCLPLVKKGGKFIAMKAS 174
Query: 228 DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKV 287
+EE+K++ A+ ++G + L + E G+R V+ K +TPKKYPR PG P K
Sbjct: 175 KAEEELKDARFAIGILGGKFISLETFELPEEAGKREMVMIEKRSKTPKKYPRKPGKPNKS 234
Query: 288 PL 289
PL
Sbjct: 235 PL 236
>gi|384044183|ref|YP_005492200.1| s-adenosylmethionine-dependent methyltransferase [Bacillus
megaterium WSH-002]
gi|345441874|gb|AEN86891.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Bacillus megaterium WSH-002]
Length = 238
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 16/235 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q Q Y L++WN KMNLTA+ D EV E+H DS++ +T +S
Sbjct: 16 SLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSIS--AAFFQDFTE-IES 72
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I P VT+++S+ KR FL H V+ +L NV +
Sbjct: 73 MC-------DVGAGAGFPSIPIKICFPHLHVTIVDSLQKRITFLTHLVNELELDNVTLCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK + RE +D+ ARAVA + +L E+CLPLV+ G F+A KG EE+KN E
Sbjct: 126 DRAETFGKKETIRESFDLVTARAVARISVLNEFCLPLVKEQGRFLAMKGASAPEELKNGE 185
Query: 238 RAVQLMGASLLQLCSVES-QSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ Q++G ++ S+E Q P Q R ++ K ++TPKKYPR PGTP K+PL
Sbjct: 186 KSFQVLGG---KVNSIEHFQLPLEQSERYIILIDKIKKTPKKYPRKPGTPVKLPL 237
>gi|295707336|ref|YP_003600411.1| glucose inhibited division protein GidB [Bacillus megaterium DSM
319]
gi|294804995|gb|ADF42061.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium DSM 319]
Length = 238
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q Q Y L++WN KMNLTA+ D EV E+H DS++ +T +S
Sbjct: 16 SLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSIS--AAFFQDFTE-IES 72
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I P VT+++S+ KR FL H V+ +L NV +
Sbjct: 73 MC-------DVGAGAGFPSIPIKICFPHLHVTIVDSLQKRITFLTHLVNELELDNVTLCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK + RE +D+ ARAVA + +L E+CLPLV+ G F+A KG EE+KN E
Sbjct: 126 DRAETFGKKETIRESFDLVTARAVARISVLNEFCLPLVKEQGRFLAMKGASAPEELKNGE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ Q++G + + + +R ++ K ++TPKKYPR PGTP K+PL
Sbjct: 186 KSFQVLGGKVKSIEHFQLPLEQSERYIILIDKIKKTPKKYPRKPGTPVKLPL 237
>gi|374298378|ref|YP_005048569.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium clariflavum DSM
19732]
gi|359827872|gb|AEV70645.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium clariflavum DSM
19732]
Length = 240
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 143/234 (61%), Gaps = 15/234 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L Q ++ Y + L +WN K+NLTA++ E++ +H DSL+I+P IK+ T
Sbjct: 19 SLTEEQVDKFLRYKNILKEWNEKINLTAIEKDREIVIKHFIDSLSILPFIKDECT----- 73
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+L+DVGTGAG PG+ + IA +VTLL+S++KR FL + L ++ +
Sbjct: 74 ------RLIDVGTGAGFPGIPVKIARESIEVTLLDSLDKRVRFLNEVIKENALSKIEALH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G FRE++D++ ARAVA + +L EYCLP V+VGG F+A KG + +E+ +S+
Sbjct: 128 GRAEEKGVLPEFREKFDISTARAVASLPVLIEYCLPFVKVGGYFIAMKGSNIADEIDSSK 187
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +MG + ++ E PF +R ++ K R+TP KYPR G P+K PL
Sbjct: 188 KALDIMGGKIEEVK--EFNLPFTDSKRNIIIIKKFRQTPTKYPRKAGKPSKEPL 239
>gi|56965872|ref|YP_177606.1| 16S rRNA methyltransferase GidB [Bacillus clausii KSM-K16]
gi|81600611|sp|Q5WAG5.1|RSMG_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56912118|dbj|BAD66646.1| glucose inhibited division protein B [Bacillus clausii KSM-K16]
Length = 237
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 130/231 (56%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++ Q EQ Y + L++WN KMNLTA+ + +V +H DS I P +T
Sbjct: 17 LSSTQHEQFKRYFELLVEWNEKMNLTAITEKKDVYLKHFYDS--ITPSFYYPFTDQ---- 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K+VD+G GAG P L L I PD ++++++S+NKR FL H + +L V
Sbjct: 71 -----KIVDIGAGAGFPSLPLKILYPDLQISIIDSLNKRIGFLTHLANELELTGVSFYHD 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK RE YDVA+ARAVA M +L+E CLP V+VGG F+A KG EEV ++
Sbjct: 126 RAELAGKSKHHREIYDVAIARAVARMSVLSELCLPFVKVGGDFIALKGAGSNEEVAEGKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L S + +R V K++ TP KYPR PG P K P+
Sbjct: 186 AIAVLGGELSASHSFQLPIEHSERQIVQIKKAKATPNKYPRKPGVPNKQPI 236
>gi|417809546|ref|ZP_12456227.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius GJ-24]
gi|335350470|gb|EGM51966.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius GJ-24]
Length = 241
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q LY + L++ N+ +NLTA+ + NEV +H DSL + +K+ T
Sbjct: 17 LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR- 177
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ---ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHF 125
Query: 178 --GRAETLGKDVSF-REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K
Sbjct: 126 HHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N+++A++++G ++ + E +R +V K ++TPKKYPR GTPAK P+
Sbjct: 186 NAQKAIEVLGGKVVADYATELPKIHDERHIIVVAKEKKTPKKYPRKAGTPAKSPI 240
>gi|223043474|ref|ZP_03613520.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|417906720|ref|ZP_12550500.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
capitis VCU116]
gi|222443263|gb|EEE49362.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|341597531|gb|EGS40085.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
capitis VCU116]
Length = 239
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 138/237 (58%), Gaps = 11/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L+ Q+EQ Y L++WN KMNLT++ + ++V +H DS I P +
Sbjct: 11 SEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFFDS--ITPSFYYDF- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ L + DVG GAG P + L I P+ KVT+++S+NKR FL H + L +
Sbjct: 68 -------DGELCICDVGAGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAAELGLQD 120
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V V RAE+ GK ++RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE
Sbjct: 121 VSFVHDRAESYGKG-AYRESYDIVTARAVARLTVLSELCLPLVKKGGQFIALKSSKGEEE 179
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + A+ ++G ++ + S E G+R +V K R+T KKYPR PGTP K PL
Sbjct: 180 LQEANFAINILGGNVKETFSFELPEDAGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|421876873|ref|ZP_16308426.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C10]
gi|372557356|emb|CCF24546.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C10]
Length = 239
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q EQ Y + L++ N++ NLTA+ D +V +H DSL + +K H S
Sbjct: 16 TLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSS 73
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV
Sbjct: 74 T------LIDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + +
Sbjct: 128 GRAEDIGQNVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G ++ + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 188 QALATLGGTV--SSAFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPI 238
>gi|90962568|ref|YP_536484.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius UCC118]
gi|122448467|sp|Q1WRS8.1|RSMG_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90821762|gb|ABE00401.1| Methyltransferase [Lactobacillus salivarius UCC118]
Length = 241
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 139/235 (59%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q LY + L++ N+ +NLTA+ + NEV +H DSL + +K+ T
Sbjct: 17 LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR- 177
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ---ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHF 125
Query: 178 --GRAETLGKDVSF-REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K
Sbjct: 126 HHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N+++A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 186 NAQKAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|417787697|ref|ZP_12435380.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus salivarius NIAS840]
gi|418960790|ref|ZP_13512677.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius SMXD51]
gi|334307874|gb|EGL98860.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus salivarius NIAS840]
gi|380344457|gb|EIA32803.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius SMXD51]
Length = 241
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 139/235 (59%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q LY + L++ N+ +NLTA+ + NEV +H DSL + +K+ T
Sbjct: 17 LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR- 177
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ---ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHF 125
Query: 178 --GRAETLGKDVSF-REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K
Sbjct: 126 HHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N+++A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 186 NAQKAIEVLGGKVIADYATELPQVHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|294501985|ref|YP_003565685.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
gi|294351922|gb|ADE72251.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
Length = 238
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q Q Y L++WN KMNLTA+ D EV E+H DS++ +T +S
Sbjct: 16 SLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSIS--AAFFQDFTE-IES 72
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I P VT+++S+ KR FL H V+ +L NV +
Sbjct: 73 MC-------DVGAGAGFPSIPIKICFPHLHVTIVDSLQKRITFLMHLVNELELDNVTLCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK + RE +D+ ARAVA + +L E+CLPLV+ G F+A KG EE+KN E
Sbjct: 126 DRAETFGKKETIRESFDLVTARAVARISVLNEFCLPLVKERGRFLAMKGASAPEELKNGE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ Q++G + + + +R ++ K ++TPKKYPR PGTP K+PL
Sbjct: 186 KSFQVLGGKVKSIEHFQLPLEQSERYIILIDKIKKTPKKYPRKPGTPVKLPL 237
>gi|326804298|ref|YP_004322116.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651693|gb|AEA01876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 239
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 132/231 (57%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q Y L+ WN K+NLTA+ D +EV +H DSL + ++ T
Sbjct: 17 LTDLQMQQFESYYQLLVSWNEKINLTAITDRDEVYLKHFYDSLTLAFSLETDLTGK---- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
KLVDVG+GAG P + L IA P +V++++S+NKR F+E L V
Sbjct: 73 -----KLVDVGSGAGFPSIPLKIAFPQLQVSIVDSLNKRIKFIETVTEELGLAGVSAYHD 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +FR Q+D+A ARAVA + +L+EYCLPLV+ GGLFVA K EE+ ++++
Sbjct: 128 RAEDFGQNKAFRGQFDLATARAVARLSVLSEYCLPLVKKGGLFVAMKAAKADEEIADAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G Q ++E G+R +V K + TP KYPR G P K P+
Sbjct: 188 AIATLGGKFSQDLALELPGQAGERHLLVIEKRKETPNKYPRKAGLPNKKPI 238
>gi|325265451|ref|ZP_08132174.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
gi|324029309|gb|EGB90601.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
Length = 237
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 146/234 (62%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L +WN+ MNLT + D +EV E+H DSL+I+ +
Sbjct: 16 LDEKQKQQFQRYYELLTEWNKVMNLTGITDYDEVNEKHFVDSLSIVKAVDIE-------- 67
Query: 119 CNSNLK-LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N+K ++D+GTGAG PGL L I P V LL+S+NKR FL + +L +++ +
Sbjct: 68 ---NIKTVIDIGTGAGFPGLPLKIVYPQLHVVLLDSLNKRVKFLNTVIEELKLDDIETLH 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + ++REQ+D+ V+RAVA + L+EYCLP +RVGG+F++ K ++E+++S+
Sbjct: 125 GRAEDYARQTNYREQFDLCVSRAVANLSTLSEYCLPYIRVGGIFISYKSGSIEDELQSSK 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+AV+++G + + +V+ Q P + R+ V K +T KKYPR G P+K P+
Sbjct: 185 KAVKILGGVIEK--TVKFQLPGTEIGRSFVKIKKEEQTKKKYPRKAGLPSKEPI 236
>gi|217967937|ref|YP_002353443.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
gi|217337036|gb|ACK42829.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
Length = 240
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 140/231 (60%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+E+ +LY AL +WNRK+NLT+++ E++ +H DSLA I PIK+
Sbjct: 20 LDPLQEEKFYLYYKALKEWNRKINLTSLEGEEEIILKHFVDSLACIIPIKDENIE----- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTGAG PG+ L I +K+TLLES K+ +FLE + +L NV+I+
Sbjct: 75 -----KIIDIGTGAGFPGIPLKIYNEKYKLTLLESQKKKVLFLEEITKILKLSNVEIIWD 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LGK+ +RE +D+A+AR VA+ I+ EY +P V++GG+F+ + E +N++R
Sbjct: 130 RAENLGKNPKYRENFDLALARGVAKPHIVLEYAIPFVKIGGIFLGQATPNNITEWENTKR 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++++G + + V + R + K TP+KYPR PG P K PL
Sbjct: 190 TIEILGGEIEEKLEVNFDNI--TRIFLKIRKKNNTPEKYPRRPGIPEKRPL 238
>gi|331092104|ref|ZP_08340935.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402305|gb|EGG81876.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
Length = 237
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+EQ H + + L++WN MNLT + + EV E+H DS+++I + S
Sbjct: 16 LNDTQKEQFHQFYEILVEWNSFMNLTGITEYEEVNEKHFVDSVSLIKAVDLSKVK----- 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++DVGTGAG PG+ L IA P ++ LL+S+NKR FL + L ++ + G
Sbjct: 71 -----TVIDVGTGAGFPGIPLKIAFPHLEIVLLDSLNKRVKFLNEVIEQLGLTGIRAIHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +REQ+D+ V+RAVA + L+EYC+P V VGG+F+ K + EEV+ S++
Sbjct: 126 RAEDYAKQKEYREQFDLCVSRAVANLSTLSEYCIPYVNVGGMFIPYKSGEIDEEVETSKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ R+ V K + T KKYPR G PAK PL
Sbjct: 186 AIHILGGKLSEVVKFRLPGTDIGRSFVKIEKIQNTSKKYPRKAGLPAKEPL 236
>gi|442806176|ref|YP_007374325.1| ribosomal RNA small subunit methyltransferase G [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442742026|gb|AGC69715.1| ribosomal RNA small subunit methyltransferase G [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 240
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 135/233 (57%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+N Q Y D L++WN K+NLTA+ D E + +H DS+++IP + +S
Sbjct: 20 INEDQINVFSKYFDMLIEWNEKINLTAIVDEREAVIKHFVDSVSVIPFFPENASS----- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PG+ + I D VTLL+S+ KR FL + T L + G
Sbjct: 75 ------LIDVGTGAGFPGIPIKIVRNDINVTLLDSLEKRVRFLNAVIKETGLTGIDAFHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FRE+YD+ +ARAV+ + +L EY +P VRVGG F+A KG + +E+ S++
Sbjct: 129 RAEDFGRDEKFRERYDIGIARAVSSLPVLCEYVMPFVRVGGYFIAMKGANVMDELAESKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + ++ + PF +R V+ K R+TP YPR G PAK P+
Sbjct: 189 AVSVLGGEIEEVKNF--TLPFDNLERNVVLIKKLRQTPTGYPRKSGKPAKSPI 239
>gi|227891371|ref|ZP_04009176.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
gi|227866760|gb|EEJ74181.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
Length = 241
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 139/235 (59%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q LY + L++ N+ +NLTA+ + NEV +H DSL + +K+ T
Sbjct: 17 LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR- 177
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ---ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHF 125
Query: 178 --GRAETLGKDVSF-REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S RE+YD+ ARAVA M +L+E CLPL ++GG F+A K EE+K
Sbjct: 126 HHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKIGGRFIALKAQKSDEELK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N+++A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 186 NAQKAIEVLGGKVIADYATELPQIHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|385841059|ref|YP_005864383.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
gi|300215180|gb|ADJ79596.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
Length = 241
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 139/235 (59%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q LY + L++ N+ +NLTA+ + NEV +H DSL + +KN T
Sbjct: 17 LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKNLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR- 177
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ---ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHF 125
Query: 178 --GRAETLGKDVSF-REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K
Sbjct: 126 HHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++++A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 186 DAQKAIEVLGGKVVADYATELPKIHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|238853720|ref|ZP_04644087.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
gi|238833656|gb|EEQ25926.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
Length = 239
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 142/231 (61%), Gaps = 8/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+++Q+EQ Y + L+++N+K+NLT + D NEV +H DS I P ++ S + S
Sbjct: 17 LSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDS--ITPLLEFSDLFKGEKS 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L DVG GAG P L + I CPD +T+++S+ KR FL+ VS L V +V
Sbjct: 75 ------LCDVGAGAGFPSLPIKILCPDLSITIVDSLGKRLKFLDELVSDLSLDKVTLVHS 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ + RE++D+ RAVA M +L+EYCLPL +V G VA KG Q+E+ +++
Sbjct: 129 RAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPLAKVDGYLVALKGPKAQDELADAKN 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G S+ ++ + +RT +V K + TPKKYPR GTP++ PL
Sbjct: 189 AIEVLGGSVKEVKELMLPDTDDERTLIVVKKVKATPKKYPRQAGTPSRKPL 239
>gi|225575642|ref|ZP_03784252.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
gi|225037152|gb|EEG47398.1| 16S rRNA methyltransferase GidB [Blautia hydrogenotrophica DSM
10507]
Length = 239
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN+ MNLT + + EV+++H DSL++ + + S
Sbjct: 18 LEQRQREQFVQYYELLIEWNKVMNLTGITEFEEVLQKHFVDSLSVKKVVDLTKIS----- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+++DVGTGAG PG+ L I P+ K+TLL+S+ KR FL + L +++ + G
Sbjct: 73 -----RVIDVGTGAGFPGIPLKIVFPELKITLLDSLQKRIKFLNEVIGRLCLKDIEAIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +REQYD+ V+RAVA + L+EYCLP V+VGG FV K QEE++NS++
Sbjct: 128 RAEEYARRKEYREQYDLCVSRAVANLASLSEYCLPYVKVGGWFVPYKSGKIQEELENSKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G ++ + R+ V+ K++ T K+YPR G P K PL
Sbjct: 188 AMELLGGRKKEVVFFQLPDSDIDRSLVIVEKAKNTLKRYPRKAGMPTKEPL 238
>gi|15896963|ref|NP_350312.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum ATCC
824]
gi|337738939|ref|YP_004638386.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum DSM
1731]
gi|384460451|ref|YP_005672871.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
gi|20177895|sp|Q97CW4.1|RSMG_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15026839|gb|AAK81652.1|AE007868_8 Glucose-inhibited division protein, GIDB
(S-adenosylmethionine-dependent methyltransferase)
[Clostridium acetobutylicum ATCC 824]
gi|325511140|gb|ADZ22776.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
gi|336292203|gb|AEI33337.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum DSM
1731]
Length = 239
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 134/220 (60%), Gaps = 10/220 (4%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y + L +WN+ MNLT++ D E++++H DS+ I C+ + +++DVG
Sbjct: 29 YKELLQEWNKVMNLTSIVDDEEIVKKHFIDSIKIF---------ECEHIVKAK-RIIDVG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PGL +AI D +V LL+S+ KR FL + L N+ V GRAE G D +
Sbjct: 79 TGAGFPGLPIAIMNDDIEVVLLDSLQKRVNFLNEVIKELNLKNISTVHGRAEDFGVDKDY 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE++DVAV+RAVA M +L+E+CLP RVGG VA KG +E+ +++A++++G +L +
Sbjct: 139 REKFDVAVSRAVANMAVLSEFCLPFARVGGYLVALKGPGINDEISTAKKAIKVLGGTLDK 198
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +VE ++ Q VV K TPKKYPR G +K P+
Sbjct: 199 VINVEFENEDFQHNLVVIKKQNGTPKKYPRKAGKVSKNPI 238
>gi|311070641|ref|YP_003975564.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|419820973|ref|ZP_14344577.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus C89]
gi|310871158|gb|ADP34633.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|388474884|gb|EIM11603.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus C89]
Length = 239
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHC 115
+L++RQ EQ LY + L++WN K+NLT++ + EV +H DS+ A K T
Sbjct: 16 SLSSRQLEQFELYYEMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFKQVNT--- 72
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
+ DVG GAG P L + I P +V++++S+NKR FLE QL N
Sbjct: 73 ---------ICDVGAGAGFPSLPIKICFPHLQVSIVDSLNKRITFLEKLAEALQLENTSF 123
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+K
Sbjct: 124 YHDRAETFGQRQDLRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELKA 183
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ +G L Q+ S + R +V K + TPKKYPR PGTP K P+
Sbjct: 184 GKKAITTLGGELEQVHSFKLPLEESDRNIIVMRKKKNTPKKYPRKPGTPNKSPI 237
>gi|291521112|emb|CBK79405.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus catus GD/7]
Length = 239
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 140/232 (60%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y + +++ N+ MNLT + + +E +++H DSL+I+ N+ H S
Sbjct: 18 LSDEQYNQYVTYYEMVVEKNKVMNLTGITEFDEFIDKHYIDSLSIV----NAVDIHQVQS 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+DVGTGAG PG+ L IA P K+TLL+S+NKR FL V L NV+ G
Sbjct: 74 A------IDVGTGAGFPGIPLKIAFPHLKITLLDSLNKRINFLNEVVETLGLENVETCHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G +REQYD+ +RAVA + L+EYC+P V++GG FV+ K + E++ SE+
Sbjct: 128 RAEDFGHRKEYREQYDLCTSRAVANLSTLSEYCVPFVKIGGQFVSYKSGNVDNELRESEK 187
Query: 239 AVQLMGASLLQLCS-VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++CS V ++ F RT V K + T KKYPR GTP+K PL
Sbjct: 188 AIRILGGEIGKVCSFVLPETDFA-RTLVPIKKIKSTGKKYPRKAGTPSKEPL 238
>gi|300362899|ref|ZP_07059069.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
gi|300352949|gb|EFJ68827.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
Length = 239
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 141/231 (61%), Gaps = 8/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+++Q+EQ Y + L+++N+K+NLT + D NEV +H DS I P ++ S + S
Sbjct: 17 LSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDS--ITPLLEFSDLFKGEKS 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L DVG GAG P L + I CPD +T+++S+ KR FL+ VS L V +V
Sbjct: 75 ------LCDVGAGAGFPSLPIKILCPDLSITIVDSLGKRLKFLDELVSDLSLDKVTLVHS 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ + RE++D+ RAVA M +L+EYCLPL +V G VA KG Q+E+ +++
Sbjct: 129 RAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPLAKVDGYLVALKGSKAQDELADAKN 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G S+ ++ + +RT +V K + TPKKYPR GTP + PL
Sbjct: 189 AIEVLGGSVKEVKELMLPDTDDERTLIVVEKVKATPKKYPRQAGTPNRKPL 239
>gi|375311479|ref|ZP_09776734.1| methyltransferase GidB [Paenibacillus sp. Aloe-11]
gi|390454469|ref|ZP_10239997.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus peoriae KCTC 3763]
gi|375076659|gb|EHS54912.1| methyltransferase GidB [Paenibacillus sp. Aloe-11]
Length = 240
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 133/239 (55%), Gaps = 14/239 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNS 110
+ H +N Q EQ Y L++WN KMNLT + + + V +H DSL A P+K+
Sbjct: 13 AEHGIVINDSQLEQFETYYRVLVEWNEKMNLTGITERDAVYTKHFYDSLSLAFYVPLKDV 72
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
+ L D+G+GAG PG+ L I P ++T+++S+NKR FL H V L
Sbjct: 73 GS------------LADIGSGAGFPGIPLKICFPHIRLTIVDSLNKRIQFLAHVVEQLGL 120
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
NV+++ RAE LG+ +R+ YD+ ARAVA + +L E+CLP VR GG F A KG DP
Sbjct: 121 ENVELIHSRAEELGRKTGYRDSYDLVTARAVARLAVLNEFCLPFVREGGHFAAMKGSDPT 180
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE+K + +++ + + + + R ++ K TP+KYPR PGTP K PL
Sbjct: 181 EEIKEASYSLKELKGKIKHVQAFHLPVEDAARHMIIIEKRAATPRKYPRKPGTPLKSPL 239
>gi|336437712|ref|ZP_08617415.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004721|gb|EGN34780.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_4_56FAA]
Length = 240
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q+ Q H Y + L++WN+ MNLT + + +EV E+H DSLAII +K
Sbjct: 15 TLTEKQKIQFHRYYELLVEWNKVMNLTGITEYDEVNEKHFVDSLAIIKAVKMEEIH---- 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PG+ L IA P KV LL+S+ KR FL+ + L V+ +
Sbjct: 71 ------SVIDIGTGAGFPGIPLKIAFPHLKVVLLDSLQKRIHFLDTVIEELGLEEVETLH 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE K +REQ+D+ V+RAVA + L+EYC+P + VGG FV+ K + +EE+ S+
Sbjct: 125 GRAEDYAKRKEYREQFDLCVSRAVANLATLSEYCIPYICVGGSFVSYKSGNVEEELNGSK 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++L+G L + + R+ V K+ T K+YPR G PAK PL
Sbjct: 185 KAIRLLGGELSGVVKFQLPGTEIGRSFVQIKKNESTKKRYPRKAGLPAKEPL 236
>gi|403068957|ref|ZP_10910289.1| 16S rRNA methyltransferase GidB [Oceanobacillus sp. Ndiop]
Length = 238
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+EQ +Y L++WN K+NLTA+ EV +H D + T+ +
Sbjct: 17 LNDTQREQFSIYYKTLVEWNEKINLTAITAEEEVYLKHFYDCI----------TAAFYYN 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +L + DVG GAG P + L I P KVT+++S+ KR FL H +L NV
Sbjct: 67 LNKDLHICDVGAGAGFPSIPLKICFPQLKVTIVDSLQKRIGFLNHLADQLKLSNVAFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FRE +D+ ARAVA M +L+E CLPLV+ G+F+A KG E+ + +
Sbjct: 127 RAENFGKNKQFRETFDIVTARAVARMSVLSELCLPLVKKDGVFIAMKGAQANSEMNDGKN 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L + + +R+ V+ K R+TPKKYPR G P K P+
Sbjct: 187 AIELLGGETEALHTFKLPQEESERSIVIITKKRKTPKKYPRKAGMPNKEPI 237
>gi|320162408|ref|YP_004175633.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
gi|319996262|dbj|BAJ65033.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
Length = 246
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 139/238 (58%), Gaps = 11/238 (4%)
Query: 53 SSHFE-TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSY 111
+S F+ TL+ RQ E + +Y LL+WN +MNLTA++DV + +H DS +
Sbjct: 13 ASLFDLTLSARQVEALRIYEQELLEWNERMNLTAIRDVPGIRVKHFLDS----------F 62
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
+ N L+D+GTGAG PG+ L I P ++TL++S+ K+ F H V L
Sbjct: 63 SCALAWRDNPPASLIDIGTGAGFPGIPLKILYPSMRLTLVDSVGKKVDFCRHVVQKLGLD 122
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
V+ ++ RAE LG++ +RE+YD AVARAVA+M ILAEY LPLVRVGG+ +A KG
Sbjct: 123 RVEALQARAEELGQNPQYREKYDCAVARAVAQMNILAEYLLPLVRVGGIMLAQKGESGPS 182
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E +E ++L+G ++ +L VE +R VV K TP YPR G PAK PL
Sbjct: 183 ETHTAEGVIRLLGGNVRKLIPVELPGVVEERFLVVVDKVAVTPSAYPRRVGVPAKSPL 240
>gi|392970933|ref|ZP_10336331.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
equorum subsp. equorum Mu2]
gi|403045140|ref|ZP_10900618.1| 16S rRNA methyltransferase GidB [Staphylococcus sp. OJ82]
gi|392510935|emb|CCI59590.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
equorum subsp. equorum Mu2]
gi|402765204|gb|EJX19288.1| 16S rRNA methyltransferase GidB [Staphylococcus sp. OJ82]
Length = 239
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 131/231 (56%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ QQ Q Y L++WN K+NLT++ + +EV +H DS+A P T
Sbjct: 17 LSEEQQRQFQTYYQMLVEWNEKINLTSITEEHEVYLKHFYDSIA--PSFYTDLTKE---- 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L + D+G GAG P + L I P+ KVT+++S+NKR FL L NV V
Sbjct: 71 ----LTICDIGAGAGFPSIPLKIIYPNLKVTIVDSLNKRIKFLNQLAEALDLENVNFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ +
Sbjct: 127 RAETFGKGV-YRESYDIVTARAVARLSVLSELCLPLVKKGGQFIALKSSKGEEELEEARF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G + + S E G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 186 GLGILGGKVRETISYELPEEAGERQMILIDKRSQTPKKYPRKPGTPNKSPL 236
>gi|302840158|ref|XP_002951635.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
gi|300263244|gb|EFJ47446.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
Length = 168
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
L+L+DVGTGAGLPG+VLA+A P WKVTLL+S+ KRC FL A + L NV++V RAE
Sbjct: 1 LRLLDVGTGAGLPGMVLAVARPQWKVTLLDSLRKRCEFLREAAARAGLDNVEVVWCRAED 60
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
G+ R+ YD+A+ARAVAE R+LAE CLP VRVGGL+VAAKG DP+ EV + A++
Sbjct: 61 AGRRPELRQAYDIAIARAVAEARVLAELCLPFVRVGGLWVAAKGPDPEAEVAAASNAIRQ 120
Query: 243 MGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G L L V+S S G+ RTA+V K+ T ++PR GTP K PL
Sbjct: 121 LGGRQLALERVQSLSAEGEPRTALVVAKTSATSARFPRQAGTPNKKPL 168
>gi|354559360|ref|ZP_08978610.1| Ribosomal RNA small subunit methyltransferase G [Desulfitobacterium
metallireducens DSM 15288]
gi|353542949|gb|EHC12409.1| Ribosomal RNA small subunit methyltransferase G [Desulfitobacterium
metallireducens DSM 15288]
Length = 238
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 143/253 (56%), Gaps = 20/253 (7%)
Query: 38 HRTRAKTLTTTRI-VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERH 96
H + K L +T+I +N + + + Q LY D L++WN KMNLT++ D E+M +H
Sbjct: 5 HLSSFKELVSTKIGINLTEIQLM------QFSLYGDLLVEWNEKMNLTSIIDPEEIMVKH 58
Query: 97 IDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNK 156
DSL + ++ + + D+GTGAG PG+ L I PD +L++S+ K
Sbjct: 59 FLDSLTLTQWVQGNMVA-------------DIGTGAGFPGIPLKIIFPDKFFSLVDSLAK 105
Query: 157 RCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVR 216
R FL+ + L V+ + RAE G D +R QYD V+RAVA + +L EY +P +R
Sbjct: 106 RLDFLQEVILKLGLEQVEPIHARAEDFGSDTQYRGQYDTVVSRAVARLPVLLEYAIPALR 165
Query: 217 VGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKK 276
VGG+F+AAKG +EEVK S +A+ ++GA + + R+ ++ K + TP++
Sbjct: 166 VGGVFLAAKGSQAEEEVKESSKALGILGAQIKDVKMFNLGQSAEYRSIIIIEKMKETPRQ 225
Query: 277 YPRDPGTPAKVPL 289
YPR GTPAK PL
Sbjct: 226 YPRKAGTPAKKPL 238
>gi|299143473|ref|ZP_07036553.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517958|gb|EFI41697.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 232
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 140/231 (60%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L T E++ Y + LL WN KMNLTA+ + +EV +H DSL++ T++ D S
Sbjct: 12 LKTDCLEKLEQYRELLLSWNDKMNLTAITEEDEVNIKHFLDSLSLFK------TNYFDGS 65
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++D+GTGAG PG+VL I D +TL +S+NKR +FL + +L ++ + G
Sbjct: 66 KS----VIDIGTGAGFPGIVLKIYNEDLNITLFDSLNKRLLFLNDVIERLKLKDIYTLHG 121
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ + RE YD+AV+RAVA + L EY LP V+VGG F+A KG + +EE+KNS+
Sbjct: 122 RAEEFGRKDTHRECYDIAVSRAVANLTTLLEYDLPFVKVGGHFIAMKGPEYEEELKNSKT 181
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ ++ S +V K + TPKKYPR G P P+
Sbjct: 182 AIEILGGKLKEVIQIKLPSEI-THYLIVIEKIKETPKKYPRAGGKPKNNPI 231
>gi|407475358|ref|YP_006789758.1| 16S rRNA methyltransferase GidB [Clostridium acidurici 9a]
gi|407051866|gb|AFS79911.1| 16S rRNA methyltransferase GidB [Clostridium acidurici 9a]
Length = 238
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 130/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN ++ EQ LY + L +WN K+N+TA+ D EV +H DS+ I K
Sbjct: 18 LNEKKIEQFRLYKELLQEWNEKINITAITDDVEVDIKHFLDSITIFKTQK---------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++D+GTG G PG+ + I VTL +S+NKR +FL +S L N++ + G
Sbjct: 68 IIKGKSIIDIGTGGGFPGVPIKIMEDGTDVTLFDSLNKRLIFLNEVISKLGLENIRTIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G +RE +D+A +RAVA + IL+EYCLP V+VGG F+A KG + +EE+K SE
Sbjct: 128 RAEEYGIKEEYRESFDIATSRAVASLNILSEYCLPFVKVGGYFIAMKGPEVEEEIKGSEN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + ++ S ++ K TP KYPR G P K PL
Sbjct: 188 AIKLLGGKIEDKIDIKLPSSDITHNLLIIKKISHTPTKYPRGGGKPKKNPL 238
>gi|374321349|ref|YP_005074478.1| methyltransferase GidB [Paenibacillus terrae HPL-003]
gi|357200358|gb|AET58255.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus terrae HPL-003]
Length = 240
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 132/237 (55%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H +N Q EQ Y L++WN KMNLT + + + V +H DSL++ +
Sbjct: 13 AEHSIVINDSQLEQFETYYRVLVEWNEKMNLTGITERDAVYTKHFYDSLSLAFYV----- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N L D+G+GAG PG+ L I P ++T+++S+NKR FL H V L +
Sbjct: 68 -----PLNDVESLADIGSGAGFPGIPLKICFPQIQLTIVDSLNKRIQFLAHVVEQLGLED 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+++ RAE LG+ +R+ YD+ ARAVA + +L E+CLP VR GG F A KG DP EE
Sbjct: 123 VELIHSRAEELGRKTGYRDSYDLVTARAVARLAVLNEFCLPFVREGGHFAAMKGSDPTEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K + +++ + + + + + R ++ K TP+KYPR PGTP K PL
Sbjct: 183 IKEASYSLKELKGKIKHIQAFQLPVEDAARHMIIIEKRAATPRKYPRKPGTPLKTPL 239
>gi|421858592|ref|ZP_16290857.1| predicted S-adenosylmethionine-dependent methyltransferase
[Paenibacillus popilliae ATCC 14706]
gi|410831888|dbj|GAC41294.1| predicted S-adenosylmethionine-dependent methyltransferase
[Paenibacillus popilliae ATCC 14706]
Length = 240
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H TL RQ+EQ Y L++WN KMNLT + + ++V E+H DSL + +Y
Sbjct: 13 AGHGWTLTERQREQFEQYFHILIEWNEKMNLTGIAERDKVYEKHFYDSLLLA-----AYV 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ D + + D+G+GAG PG+ L I P ++T+++S+NKR FL H V L
Sbjct: 68 NLEDVAT-----MADIGSGAGFPGIPLHILFPHVQLTIVDSLNKRIQFLNHLVQELGLTG 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+ + GRAE + + +R+++D+ ARAVA + +L E+CLP V+ GGLF A KG +P EE
Sbjct: 123 VECIHGRAEEVARKPQYRDRFDLVTARAVARLNVLNEFCLPFVKAGGLFAAMKGTNPAEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + +++Q++ S L + +R ++ K TPK YPR PG P K P+
Sbjct: 183 IAEAAKSLQVLQGSFLADHKLTLPVEQSERHIIMIAKKGSTPKAYPRKPGMPLKAPI 239
>gi|374605464|ref|ZP_09678391.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus dendritiformis C454]
gi|374388915|gb|EHQ60310.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus dendritiformis C454]
Length = 240
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H TL RQ+EQ Y L++WN KMNLT + + ++V E+H DSL +
Sbjct: 13 AGHGWTLTERQREQFEQYFHILVEWNEKMNLTGITERDKVYEKHFYDSLLL--------A 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+H + + + D+G+GAG PG+ L I P ++T+++S+NKR FL+H V L
Sbjct: 65 AHVN--MEDVVTMADIGSGAGFPGIPLHILFPHVQLTIVDSLNKRIQFLKHLVQELGLTG 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+ + GRAE + + +R+++D+ ARAVA + +L E+CLP V+ GGLF A KG +P EE
Sbjct: 123 VECIHGRAEEVARKPQYRDRFDLVTARAVARLNVLNEFCLPFVKTGGLFAAMKGTNPAEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ S +++Q++ S L + +R ++ K TPK YPR PG P K P+
Sbjct: 183 IAESAKSLQVLQGSFLADHKLTLPVEQSERHIILIAKKGPTPKAYPRKPGMPLKAPI 239
>gi|375086757|ref|ZP_09733155.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Megamonas
funiformis YIT 11815]
gi|374564296|gb|EHR35595.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Megamonas
funiformis YIT 11815]
Length = 242
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 137/231 (59%), Gaps = 7/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L + Q + Y + L++WN K+NLTA+ + EV +HI DSL+ Y +
Sbjct: 18 LTSNQISAFNRYYELLVEWNEKINLTAITEPREVAIKHIVDSLS-------CYQKELFTG 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L+DVGTGAG PGL L I P+ K+TLL+S+NKR FL+ V L +V+++
Sbjct: 71 QTGQISLIDVGTGAGFPGLPLKIFYPELKLTLLDSLNKRVKFLQLVVDELGLKDVEVIHA 130
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
R+E ++ +RE++D+A ARAVA + I+ EYCLP V+ GG F+A KG +EE++ +++
Sbjct: 131 RSEEAARNKKYREKFDLATARAVARLPIICEYCLPFVKQGGTFIALKGRQYEEEIQEAQK 190
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A ++G L++ V+ +R V K + TPK YPR GTP + P+
Sbjct: 191 AFSVLGGKLVKSMPVKLPELEDKRAVVYIKKEKATPKVYPRKAGTPERNPI 241
>gi|160941472|ref|ZP_02088807.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
gi|158435618|gb|EDP13385.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 138/239 (57%), Gaps = 8/239 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH--CD 116
L+ +Q EQ Y + L++ N+ MNLTA+ D +V+ +H DSL++ +K S CD
Sbjct: 20 LSEKQLEQFFTYYEMLVEKNKVMNLTAITDETDVVSKHFSDSLSLFRVLKRVMDSGDGCD 79
Query: 117 SSCNSNLKL------VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
S +L +DVGTGAG PG+ L IA P K+TLL+S+NKR FLE +L
Sbjct: 80 GSRVYEEELLEGKSVIDVGTGAGFPGIPLKIAFPGIKLTLLDSLNKRVKFLEEVCDALEL 139
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
NV+ + GRAE +G+ RE YD+ V+RAVA + L+EYC+P V++GG FV K + +
Sbjct: 140 KNVEFIHGRAEDIGRQKEHREMYDLCVSRAVANLASLSEYCMPFVKIGGFFVPYKSGEIE 199
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E+K++ AV ++G L + R+ VV K + KKYPR G P K PL
Sbjct: 200 DELKSAGSAVGILGGELEFVDKFMLPGTDASRSLVVIKKVKGISKKYPRKAGMPTKEPL 258
>gi|301301113|ref|ZP_07207270.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851242|gb|EFK78969.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 241
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 139/235 (59%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q LY + L++ N+ +NLTA+ + NEV +H DSL + +K+ T
Sbjct: 17 LTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR- 177
L L DVG GAG P L + IA P K+T+++S+NKR FL+ LTQ LN+Q V
Sbjct: 72 ---ELSLCDVGAGAGFPSLPVKIAFPQLKITIVDSLNKRIKFLQ---ELTQKLNLQDVHF 125
Query: 178 --GRAETLGKDVSF-REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S RE+YD+ ARAVA M +L+E CLPL +VGG F+A K EE+K
Sbjct: 126 HHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAKVGGRFIALKAQKSDEELK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++++A++++G ++ + E +R +V K + TPKKYPR GTPAK P+
Sbjct: 186 DAQKAIEVLGGKVVADYATELPKIHDERHIIVVAKEKETPKKYPRKAGTPAKSPI 240
>gi|295398148|ref|ZP_06808197.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
gi|294973667|gb|EFG49445.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
Length = 238
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 135/231 (58%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q Q + Y + L++WN K+NLTA+ + EV +H DSL + H + +
Sbjct: 17 LNDQQMAQFNRYFELLVEWNEKINLTAITALEEVYLKHFYDSLTV--------AMHVEMA 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ +LVDVG+GAG P + L IA P+ +T+++S+NKR F+ V+ L V
Sbjct: 69 -DQEYRLVDVGSGAGFPSIPLKIALPNLDITIVDSLNKRINFINEVVNELGLEGVHAYHD 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ FR+Q+D A ARAVA + +LAE+CLPLV+ G F+A K +E++ ++
Sbjct: 128 RAEIFGQNPQFRDQFDFATARAVARLNLLAEFCLPLVKKDGQFLAMKAQKSDDEIEEAKH 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + G+R + K + TP KYPR PG PAK PL
Sbjct: 188 AIAILGGKFVEDIQFDLPAEAGERHILRIEKPKETPNKYPRKPGKPAKSPL 238
>gi|160932437|ref|ZP_02079827.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
gi|156868396|gb|EDO61768.1| 16S rRNA methyltransferase GidB [Clostridium leptum DSM 753]
Length = 236
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 138/232 (59%), Gaps = 14/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y LL+WN+KMNLTA+++ EV+ +H DSLA++ +
Sbjct: 18 LSPEQLDQFDGYCRLLLEWNKKMNLTAIREPEEVLIKHFVDSLALL----------GFAE 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
KL+DVGTGAG PGL L IA PD ++ LL+S+ KR FL+ AV T L+ I+
Sbjct: 68 LPQGAKLIDVGTGAGFPGLPLKIARPDLRLALLDSLKKRLTFLQ-AVCGTLGLDADIIHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK R+ +D AV+RAVA + +LAEYCLP VRVGG+F+AAKG +EE+ +E+
Sbjct: 127 RAEDGGKLSGLRQNFDAAVSRAVAPLNLLAEYCLPFVRVGGIFLAAKGPQVKEELSQAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A QL+G + + E P G RT V K R TP YPR AK PL
Sbjct: 187 AFQLLGGRAEK--TTEYFLPDGSGRTLVTVKKERATPALYPRHGSKIAKKPL 236
>gi|296330030|ref|ZP_06872514.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676754|ref|YP_003868426.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153069|gb|EFG93934.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414998|gb|ADM40117.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 239
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 TLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K++ TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKTKNTPKKYPRKPGTPNKSPI 237
>gi|386716448|ref|YP_006182772.1| glucose-inhibited division protein B [Halobacillus halophilus DSM
2266]
gi|384076005|emb|CCG47502.1| glucose-inhibited division protein B [Halobacillus halophilus DSM
2266]
Length = 238
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +QQ+Q H Y + L++WN KMNLTA+ D V +H DSL T+
Sbjct: 17 LSEQQQQQFHKYFEILVEWNEKMNLTAITDKEGVYLKHFYDSL----------TASFYYD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L++ DVG GAG P L L I P KVT+++S+ KR FL H L +V
Sbjct: 67 FTKPLRICDVGAGAGFPSLPLKIVFPHLKVTIVDSLKKRITFLNHLAHELGLDDVAFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FRE YD+ +ARAVA M +L+E CLPL GG F+A KG + +E++++
Sbjct: 127 RAENFGKNAKFREGYDLVMARAVARMSVLSELCLPLTAKGGHFMAMKGPNLADEMEDAAL 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+Q +G + + + +R + K R+TPKKYPR GTP K P+
Sbjct: 187 AIQTVGGEVENVHTFTLPEEDSERNIAIIEKRRKTPKKYPRKAGTPNKAPI 237
>gi|354582049|ref|ZP_09000952.1| methyltransferase GidB [Paenibacillus lactis 154]
gi|353200666|gb|EHB66126.1| methyltransferase GidB [Paenibacillus lactis 154]
Length = 239
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 133/236 (56%), Gaps = 20/236 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTS 113
++ RQ Q Y + L++WN KMNLT + + ++V +H DSL + +P I N
Sbjct: 19 IDDRQLHQFEQYYELLVEWNEKMNLTGITERDQVYTKHFYDSLTLAFYVKMPDIGN---- 74
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
+ D+G+GAG PG+ L IA P +T+++S+NKR FL+H V L V
Sbjct: 75 -----------MADIGSGAGFPGIPLKIAFPHLNLTIVDSLNKRITFLKHVVETLGLEQV 123
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+++ GRAE + + +R+ +D+ ARAVA M +L E+CLP +VGG F A KG DP EE+
Sbjct: 124 ELIHGRAEEVARKQGYRDGFDLVTARAVARMAVLNEFCLPFTKVGGRFAAMKGSDPSEEI 183
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + R+++ + SL Q+ S R V+ K TP KYPR GT AK PL
Sbjct: 184 QEAARSLKELRGSLNQVYSFSLPIEESDRHIVIIDKKGATPAKYPRKAGTAAKSPL 239
>gi|395240659|ref|ZP_10417690.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394475819|emb|CCI87667.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 240
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 141/237 (59%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H ++ Q +Q Y L++ N+ +NLT + D NEV +H DS+ + + + +T
Sbjct: 11 NKHNIAISEEQTKQFAQYFTLLVETNKNVNLTRITDQNEVYLKHFFDSITPLITVASLFT 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
++ DVG GAG P + L I CPD K+T+++S+ KR FL++ L +
Sbjct: 71 EGA--------RICDVGAGAGFPSIPLKILCPDLKITIVDSLAKRLTFLKNLSQELGLSD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++++ ARAVA M +L+EYCLPLV+ GG FVA KG QEE
Sbjct: 123 VELVHGRAEDVGQNQLYREKFEIVTARAVANMTVLSEYCLPLVQTGGFFVALKGPKAQEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +S++A+Q++G L + +R+ VV K + TPKKYPR G P + P+
Sbjct: 183 LDDSQKAIQVLGGQLESAKELTLPDSDEERSIVVVKKVKATPKKYPRQAGMPRRKPI 239
>gi|383755647|ref|YP_005434550.1| putative ribosomal RNA small subunit methyltransferase G
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381367699|dbj|BAL84527.1| putative ribosomal RNA small subunit methyltransferase G
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 238
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 141/231 (61%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q EQ + Y + L++WN K+NLTA+ + EV +H+ DS+ T++ ++
Sbjct: 17 LNDKQMEQFNRYFELLVEWNEKINLTAITEPKEVAIKHMIDSI----------TAYDEAL 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++DVGTGAG PGL L I CP+ K+TL++S+NKR FL+ V L +V+ V
Sbjct: 67 FKDGTTVIDVGTGAGFPGLPLKIFCPEIKLTLMDSLNKRIKFLQTVVEELGLKDVECVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ +RE +D+AV+RAVA + IL EYCLP V+ GG F+A KG QEE + + +
Sbjct: 127 RAEEGARNKKYRESFDIAVSRAVARLPILCEYCLPFVKKGGHFIALKGMQFQEEAEEAAK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+++MG S ++ V+ +R + K+ TPK YPR GTP K P+
Sbjct: 187 AIKVMGGSKTEIRPVKLPELDDKRAVITITKTMPTPKAYPRKAGTPTKNPI 237
>gi|395241082|ref|ZP_10418101.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
pasteurii CRBIP 24.76]
gi|394481609|emb|CCI84341.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
pasteurii CRBIP 24.76]
Length = 240
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 12/233 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ +LY + L++ N+ +NLT + EV +H DS + P+ H
Sbjct: 17 LSDQQLEQFNLYFEDLIETNKHVNLTRITSKEEVYLKHFYDS---VTPL-----LHFAQF 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L DVG GAG P + L I PD+KVT+++S+ KR FL++ L V++V G
Sbjct: 69 FGQDASLCDVGAGAGFPSIPLKILRPDFKVTIVDSLAKRLTFLDNLTKKLGLDGVELVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G++ +R+Q+D+ ARAVA M +L+EYCLPLV+ GG FVA KG Q+E+K S++
Sbjct: 129 RAEDIGQNPKYRQQFDIVTARAVANMTVLSEYCLPLVKEGGYFVALKGPKAQDELKESQK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++GA L + S E P Q R+ ++ K + TPKKYPR G P + P+
Sbjct: 189 AVDVLGAEL--VASKELTLPLSQEDRSLLIFKKIKATPKKYPRQAGMPRRKPI 239
>gi|331086946|ref|ZP_08336022.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409607|gb|EGG89046.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 240
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ RQ+EQ L+ + L++WN MNLT + + EV E+H DS++I+ +
Sbjct: 16 VLDDRQKEQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAM---------- 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S ++DVGTGAG PG+ L I P+ +V LL+S+NKR FL + QL ++ +
Sbjct: 66 DMKSVKSVIDVGTGAGFPGIPLKIVFPELEVVLLDSLNKRVKFLNAVIEKLQLKGIRAIH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE K +REQ+D+ V+RAVA + L+EYCLP V+ GG+F+ K + EEV ++
Sbjct: 126 GRAEDYAKQQEYREQFDLCVSRAVANLATLSEYCLPYVKKGGVFLPYKSGEIDEEVVQAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+AV ++G +L ++ + R+ V K + T K+YPR G PAK PL
Sbjct: 186 KAVTILGGTLREVIKFQLPGSEIGRSFVKIEKVKPTAKRYPRKAGLPAKEPL 237
>gi|357238190|ref|ZP_09125527.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
ictaluri 707-05]
gi|356752913|gb|EHI70034.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
ictaluri 707-05]
Length = 237
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 136/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI +
Sbjct: 16 SLSERQKEQFDTYFNTLVEWNTKINLTAITDEKEVYLKHFYDSVA---PILQGFIQ---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N LKL+D+G GAG P L + I P K+T+++S+NKR +FL H L V
Sbjct: 69 --NEPLKLLDIGAGAGFPSLPMKILFPHLKITIIDSLNKRILFLNHLAKELGLTEVDFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+D+ ARAVA M+IL+E +P ++VGG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDLVTARAVARMQILSELTIPFLKVGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ L+ A + + + P G R + K + TPKK+PR GTP K PL
Sbjct: 187 KALSLLFAKV--VTNYGYVLPNGDARYITIVEKKKETPKKFPRKAGTPNKKPL 237
>gi|340357093|ref|ZP_08679721.1| glucose inhibited division protein B [Sporosarcina newyorkensis
2681]
gi|339618771|gb|EGQ23362.1| glucose inhibited division protein B [Sporosarcina newyorkensis
2681]
Length = 239
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 136/235 (57%), Gaps = 18/235 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y + L++WN KMNLTA+ D V +H DS+ TS
Sbjct: 17 LSDVQKQQFKRYFEVLVEWNEKMNLTAITDAPSVYLKHFYDSI----------TSSFYVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+S + DVG GAG P + L I P +VT+++S+NKR FL H + +L V V
Sbjct: 67 LSSVESICDVGAGAGFPSIPLKICFPHLQVTIVDSLNKRITFLNHLANELKLEKVAFVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +REQ+D+ ARAVA + +L+E C+PL + GGLFV+ KG EE++++ +
Sbjct: 127 RAEEFGRDTKYREQFDLVTARAVARLSVLSELCIPLAKQGGLFVSMKGAAASEELQDATK 186
Query: 239 AVQLMGASLLQ----LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+L+GA L + L VE+ +R + K ++TPKKYPR G P K P+
Sbjct: 187 AVKLLGAVLQEEHEFLLPVEN----SERHIFIFKKEKQTPKKYPRKAGVPNKTPI 237
>gi|242372607|ref|ZP_04818181.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
gi|242349662|gb|EES41263.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
Length = 239
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 136/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y L++WN KMNLT++ + ++V +H DS I P +
Sbjct: 17 LSQTQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDS--ITPSFYYDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + + DVG GAG P + L I P+ KVT+++S+NKR FL H + L +V V
Sbjct: 68 -DGDKSICDVGAGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAAELGLQDVSFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE+ GK +RE YD+ ARAVA + +L+E CLP+V+ GG F+A K +EE++ ++
Sbjct: 127 RAESYGKG-DYRESYDIVTARAVARLTVLSELCLPIVKKGGQFIALKSSKGEEELQEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + + E G+R +V K R+T KKYPR PGTP K PL
Sbjct: 186 AINILGGNVRETYTFELPEDAGERQMIVIDKRRQTSKKYPRKPGTPNKSPL 236
>gi|163814997|ref|ZP_02206384.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
gi|158449680|gb|EDP26675.1| 16S rRNA methyltransferase GidB [Coprococcus eutactus ATCC 27759]
Length = 236
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 10/229 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y D L++WN MNLTA+ D ++V+ +H DSL + +
Sbjct: 15 LSEKQLQQFSRYYDILVEWNSFMNLTAITDRDDVIIKHFADSLLL----------YKYKD 64
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ NL ++DVGTGAG PG+ L IA P+ KVTL++S+NKR FL + +L NV+ V
Sbjct: 65 LHDNLSVLDVGTGAGFPGIPLKIAFPELKVTLMDSLNKRLNFLNEVIKELELDNVETVHS 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ +RE+YD+ V+RAVA + L+E+CLP +VGG FV K + +E+ + ++
Sbjct: 125 RAEDGGKNPLYREKYDLVVSRAVANLATLSEWCLPFTKVGGYFVPYKSNALSDEMTDGKK 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKV 287
A++++G + + + QR+ V K T KKYPR PG K+
Sbjct: 185 AIRILGGQVENIFNTNIPETDNQRSFVFVKKIANTDKKYPRKPGASKKL 233
>gi|308071637|ref|YP_003873242.1| methyltransferase GidB [Paenibacillus polymyxa E681]
gi|305860916|gb|ADM72704.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
Length = 240
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 132/237 (55%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H +N Q EQ Y L++WN KMNLT + + + V +H DSL++ +
Sbjct: 13 AEHSIVINDSQLEQFETYYRVLVEWNEKMNLTGITERDAVYTKHFYDSLSLAFYV----- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N L D+G+GAG PG+ L I P ++T+++S+NKR FL H V L N
Sbjct: 68 -----PLNDVGSLADIGSGAGFPGIPLKICFPQIQLTIVDSLNKRIQFLAHVVEQLGLEN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+++ RAE LG+ +R+ YD+ ARAVA + +L E+CLP VR GG F A KG DP EE
Sbjct: 123 VELIHSRAEELGRKPGYRDSYDLVTARAVARLAVLNEFCLPFVREGGHFAAMKGSDPTEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K + +++ + + + + + R ++ K TP++YPR PGTP K PL
Sbjct: 183 IKEASYSLKELKGKIKHVQAFQLPVEDAARHMIIIEKRAATPRRYPRKPGTPLKAPL 239
>gi|339006726|ref|ZP_08639301.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
laterosporus LMG 15441]
gi|421874916|ref|ZP_16306515.1| 16S rRNA methyltransferase GidB [Brevibacillus laterosporus GI-9]
gi|338775935|gb|EGP35463.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
laterosporus LMG 15441]
gi|372456113|emb|CCF16064.1| 16S rRNA methyltransferase GidB [Brevibacillus laterosporus GI-9]
Length = 238
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 135/233 (57%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCD 116
L + Q +Q Y L++WN KMNLT + + +EV +H DS LA P+++
Sbjct: 17 LTSEQLDQFDQYYRLLVEWNEKMNLTGITEEDEVYNKHFYDSISLAFYVPLQDMK----- 71
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
K+ DVG GAG P + L I P ++T+++S+ KR FL H + L ++ V
Sbjct: 72 -------KMADVGGGAGFPSIPLKICFPHLQMTIIDSLQKRMNFLSHVGTELGLTDLYPV 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE +G+D +REQ+D+ ARAVA + +LAE+CLPLV+ GLF + KG D E+ +
Sbjct: 125 HGRAEEIGQDKKYREQFDIVSARAVARLNLLAEFCLPLVKQNGLFASMKGPDVTLELNEA 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+RA++L+G ++ S E G+R ++ K TPK YPR PG PAK PL
Sbjct: 185 KRAIKLLGGKTRKVESFELPDEAGERNIILINKIETTPKTYPRRPGIPAKKPL 237
>gi|152977681|ref|YP_001377198.1| 16S rRNA methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
gi|189039481|sp|A7GVP5.1|RSMG_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152026433|gb|ABS24203.1| methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
Length = 239
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ +Y + L++WN KMNLTA+ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFEMYFETLVEWNEKMNLTAITEKEEVYLKHFFDSI----------TAAFYY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++ L + DVG GAG P + L I P KVT+++S+ KR FL H +L +V
Sbjct: 66 DFSNPLSICDVGAGAGFPSIPLKICFPHLKVTIVDSLQKRINFLNHLAQKLELSDVAFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET GK RE YD+ +ARAVA + +L+E CLPLV+VGG F+A KG EE++N +
Sbjct: 126 DRAETFGKKEHVRESYDIVMARAVARLSVLSELCLPLVKVGGTFIAMKGAAANEEIENGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G L ++ + Q PF +R ++ K R+TPKKYPR PGTP K+P+
Sbjct: 186 YAVEVLGGQLEEVSTF--QLPFEESERNILLIKKKRKTPKKYPRKPGTPNKLPI 237
>gi|336429179|ref|ZP_08609147.1| hypothetical protein HMPREF0994_05153 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336003095|gb|EGN33186.1| hypothetical protein HMPREF0994_05153 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 244
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 134/231 (58%), Gaps = 8/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+E+ LY + L+QWN MNLTA+ + NEV+++H DSL++I +
Sbjct: 20 LNQEQEEKFILYYELLVQWNEVMNLTAITEFNEVLKKHFIDSLSLIRAVP--------EL 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L+DVGTGAG PG+ L IA P KVTLL+S+NKR FL + L +++ V G
Sbjct: 72 EEKKLSLIDVGTGAGFPGIPLKIAYPGLKVTLLDSLNKRIKFLNEVIDKLGLEDIEAVHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K FRE+YD+ V+RAVA + L+EYCLP VRVGG F++ K +EE +E+
Sbjct: 132 RAEDYAKPSLFREKYDICVSRAVANLSTLSEYCLPFVRVGGQFISYKSEKIEEEAAAAEK 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + R V K TPKKYPR G PAK P+
Sbjct: 192 AIHILGGDVKDKKDFYLPDSDIYRILYVIEKKSVTPKKYPRKAGLPAKEPI 242
>gi|330718085|ref|ZP_08312685.1| 16S rRNA methyltransferase GidB [Leuconostoc fallax KCTC 3537]
Length = 239
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 137/232 (59%), Gaps = 11/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q H Y + L++ N +NLTA+ + +EV +H DSL + + S
Sbjct: 17 LTETQVKQFHQYYELLVETNEHVNLTAITEQHEVYLKHFFDSLTV--------AQYVTSL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+N L+DVGTGAG P L L IA P +VTL++++ KR FL+ V L +V IV G
Sbjct: 69 QTTNQTLIDVGTGAGFPALPLKIAFPQLRVTLVDALQKRVRFLKTVVEALGLDHVTIVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G++ FREQ+D A ARAVA +LAEY LP V++GG + KG + Q+E+ + E+
Sbjct: 129 RAEDIGQEQRFREQFDYATARAVARTSVLAEYTLPFVKIGGQLLVMKGANAQQELGDGEK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
A+ +G + + + Q P G + + + K ++TPKKYPR GTP K P+
Sbjct: 189 ALHTLGGRFKE--AFDFQLPNGDKRFIQIIDKVQKTPKKYPRQAGTPNKKPI 238
>gi|357056594|ref|ZP_09117633.1| 16S rRNA methyltransferase GidB [Clostridium clostridioforme
2_1_49FAA]
gi|355379959|gb|EHG27106.1| 16S rRNA methyltransferase GidB [Clostridium clostridioforme
2_1_49FAA]
Length = 259
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 139/240 (57%), Gaps = 10/240 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q +Q Y + L++ N+ MNLTA+ D +V+ +H DS+++ +K D
Sbjct: 20 LNEKQLDQFFTYYEMLVEKNKVMNLTAITDEADVVSKHFSDSVSLFRVLKK-VMDFGDGC 78
Query: 119 CNSNL---------KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
C S + ++DVGTGAG PG+ L IA P K+TLL+S+NKR FLE +
Sbjct: 79 CGSGVYEEGMLKGKSIIDVGTGAGFPGIPLKIAFPGIKLTLLDSLNKRVKFLEEVCNELG 138
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L NV+ + GRAE +G+ RE YD+ V+RAVA + L+EYC+P V++GG FV K +
Sbjct: 139 LQNVEFIHGRAEDIGRQKEHREMYDLCVSRAVANLSSLSEYCMPFVKIGGFFVPYKSGEI 198
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++E++++ +AV ++G L+ + R+ V+ K + KKYPR G P K PL
Sbjct: 199 EDELRSAGKAVGILGGELVFVDKFMLPGTDVSRSLVIIKKVKGISKKYPRKAGMPTKEPL 258
>gi|421075123|ref|ZP_15536138.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans JBW45]
gi|392526565|gb|EIW49676.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans JBW45]
Length = 238
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L Q + Y + L++WN+K+NLTA+ D NEV +H+ DSL+ I
Sbjct: 17 SLTEEQLTRFSQYFEILIEWNQKINLTAITDPNEVAVKHMIDSLSCYDKI---------- 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ K++DVGTGAG PGL L I PD K+TL +S+NKR +FL+ ++ +++ +
Sbjct: 67 IFKNGAKIIDVGTGAGFPGLPLKIYRPDLKLTLFDSLNKRILFLKEVAEKLEIPDIEFIH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK+ FRE YD+AV+RAVA + IL+E CLP V VGG F+A KG +E+K S
Sbjct: 127 SRAEDGGKNKQFREAYDIAVSRAVARLSILSELCLPFVAVGGFFIALKGSQYSQEIKEST 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++ +++ R V K ++T YPR PG K PL
Sbjct: 187 SALRVLGGEIEKIENIKLPGLDDVRAVVYIRKIKKTLPVYPRRPGIAEKNPL 238
>gi|350268392|ref|YP_004879699.1| methyltransferase GidB [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|443631594|ref|ZP_21115775.1| methyltransferase GidB [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|349601279|gb|AEP89067.1| methyltransferase GidB [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|443349399|gb|ELS63455.1| methyltransferase GidB [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 239
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K++ TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKTKNTPKKYPRKPGTPNKSPI 237
>gi|339624054|ref|ZP_08659843.1| 16S rRNA methyltransferase GidB [Fructobacillus fructosus KCTC
3544]
Length = 238
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 131/232 (56%), Gaps = 11/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y D L+ N NLTA+ + +EV +H DSL ++ +
Sbjct: 17 LSDDQMAQFATYFDELVTVNESFNLTAITEQDEVYLKHFFDSLTLVLKVPELLEGSAS-- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVG+GAG P L L IA P+ K+T+++S+NKR FL++ V L +VQ++ G
Sbjct: 75 ------LIDVGSGAGFPALPLKIALPNLKITMVDSLNKRVNFLKNTVKKLGLNDVQVLHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG D RE +D A ARAVA ++LAEY LP V+VGG F+ KG QEE+ ++
Sbjct: 129 RAEDLGHDSKLRESFDFATARAVARTQVLAEYTLPFVKVGGEFLVMKGSAGQEEMNAGKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G LL + E P G R V K +TPKKYPR GTP K PL
Sbjct: 189 ALATLGGELLSEKTFE--LPNGDPRVIQVVKKVAKTPKKYPRQAGTPTKKPL 238
>gi|386320381|ref|YP_006016544.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
gi|323465552|gb|ADX77705.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
Length = 239
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 137/237 (57%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H TL+ Q++Q Y + L++WN K+NLT++ + +EV +H DS I P + +
Sbjct: 11 SEHGITLSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDS--ITPSFYHDF- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +L L DVG GAG P + L I P+ VT+++++NKR FL +L
Sbjct: 68 -------NQSLNLCDVGAGAGFPSIPLKIIFPEIHVTIVDALNKRIQFLNQLAEALELEG 120
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+ V RAET K+ +R +DV ARAVA M +L+E C+PLV+ G+F+A K QEE
Sbjct: 121 VRFVHDRAETFAKNEDYRASFDVVTARAVARMTVLSELCIPLVKKHGVFLALKSSKGQEE 180
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + AV ++G + ++ + + G+R V K +TPKKYPR PGTP K PL
Sbjct: 181 LEEARFAVGVLGGRIERVDTFDLPEDAGERQIVTIEKRSQTPKKYPRKPGTPNKSPL 237
>gi|375088037|ref|ZP_09734380.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Dolosigranulum
pigrum ATCC 51524]
gi|374563304|gb|EHR34624.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Dolosigranulum
pigrum ATCC 51524]
Length = 238
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 134/231 (58%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ RQ EQ +Y L ++N K+NLTA+ + EV +H DSL ++P I+ + S CD
Sbjct: 17 VSDRQLEQFEVYARVLKEYNEKVNLTAIVEREEVFLKHFYDSLTVLPYIEAAGASLCD-- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
VG+GAG P L L I PD VT+++S+NKR FL+H V L V +
Sbjct: 75 ---------VGSGAGFPSLPLKIMMPDLHVTIVDSLNKRITFLKHLVEELGLEGVSLYHD 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ FR Q+D ARAVA + +LAE C+PL ++GG F+A KG +E+ +++
Sbjct: 126 RAETFGQNAKFRGQFDYVTARAVASLPVLAELCMPLNKMGGSFIAMKGDGGPDELLEAKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +G + + ++E G+R ++ K + TP KYPR PG P K P+
Sbjct: 186 IIATLGGKVREDVALELPEGAGERHLLIIDKKKETPNKYPRRPGMPEKKPV 236
>gi|374710124|ref|ZP_09714558.1| 16S rRNA methyltransferase GidB [Sporolactobacillus inulinus CASD]
Length = 235
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y + L++WN KMNLTA+ D EV+ +H DSL T S
Sbjct: 15 LTQQQSHQFQRYYELLVEWNDKMNLTAITDQKEVVIKHFFDSL----------TPCFYFS 64
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L DVG+GAG PG+ + I P+ +T+++S+ KR FL+ L ++ +
Sbjct: 65 MQKVQTLCDVGSGAGFPGIPMKILFPELHLTIVDSLKKRLTFLQTVADELDLKDISLHHD 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET + RE +DV ARAVA++ +L+EYCLPLV +GG F+A KG + E + ++
Sbjct: 125 RAETFARKTEMREHFDVVTARAVAKLSVLSEYCLPLVHLGGTFIALKGSNADVEAEQADH 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + ++ S+E G+R+ V K +PKKYPR PG P K PL
Sbjct: 185 AIKLLGGEMSRMISLELPEASGKRSLVFIGKKEASPKKYPRKPGVPMKDPL 235
>gi|418618875|ref|ZP_13181727.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
hominis VCU122]
gi|374826444|gb|EHR90341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
hominis VCU122]
Length = 240
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 126/220 (57%), Gaps = 11/220 (5%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y L++WN KMNLT++ D +EV +H DS+ T+ N L L DVG
Sbjct: 29 YYRLLVEWNEKMNLTSITDEHEVYLKHFYDSI----------TAGFYYDFNQPLTLCDVG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
GAG P + L I P+ KVT+++S+NKR FL H L V V RAET GK V+
Sbjct: 79 AGAGFPSIPLKIVFPELKVTIVDSLNKRIKFLNHLAVELGLTQVSFVHDRAETFGKGVN- 137
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE YDV ARAVA + +L+E CLPLV+ GG F+A K +EE+ ++ + ++G +
Sbjct: 138 RETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSD 197
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + G+R ++ K R+TPKKYPR PGTP K PL
Sbjct: 198 SYTFDLPEDAGERQMIIVDKRRQTPKKYPRKPGTPNKAPL 237
>gi|315644288|ref|ZP_07897458.1| methyltransferase GidB [Paenibacillus vortex V453]
gi|315280663|gb|EFU43952.1| methyltransferase GidB [Paenibacillus vortex V453]
Length = 240
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 136/237 (57%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
H T++ +Q +Q +Y + L++WN KMNLT + + +V +H DS+ +
Sbjct: 13 GEHGITIDEKQLQQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSVTL--------A 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ D S ++ D+G+GAG PG+ L I P K+T+++S+NKR FL+ V L +
Sbjct: 65 FYVDMSKIGSM--ADIGSGAGFPGIPLKICFPHIKLTIVDSLNKRITFLKFVVDTLGLSS 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+++ GRAE + + +R+ +D+ ARAVA M +L E+CLP +VGG F A KG DP EE
Sbjct: 123 VELIHGRAEEVARKQGYRDGFDLVTARAVARMAVLNEFCLPFTKVGGRFAAMKGSDPAEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK S R+++ + +L ++ S R VV K TP KYPR GT AK P+
Sbjct: 183 VKESARSLKELRGALNKVHSFSLPVEESDRHIVVIDKKGATPSKYPRKAGTAAKTPI 239
>gi|228474165|ref|ZP_04058902.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|314935196|ref|ZP_07842549.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
gi|228271860|gb|EEK13197.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|313656531|gb|EFS20270.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
Length = 240
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 126/220 (57%), Gaps = 11/220 (5%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y L++WN KMNLT++ D +EV +H DS+ T+ N L L DVG
Sbjct: 29 YYRLLVEWNEKMNLTSITDEHEVYLKHFYDSI----------TAGFYYDFNQPLTLCDVG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
GAG P + L I P+ KVT+++S+NKR FL H L V V RAET GK V+
Sbjct: 79 AGAGFPSIPLKIVFPELKVTIVDSLNKRIQFLNHLAVELGLTQVSFVHDRAETFGKGVN- 137
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE YDV ARAVA + +L+E CLPLV+ GG F+A K +EE+ ++ + ++G +
Sbjct: 138 RETYDVVTARAVARLTVLSELCLPLVKKGGQFIALKSAKGEEELAEAQFGISILGGAFSD 197
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + G+R ++ K R+TPKKYPR PGTP K PL
Sbjct: 198 SYTFDLPEDAGERQMIIVDKRRQTPKKYPRKPGTPNKAPL 237
>gi|167759569|ref|ZP_02431696.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
gi|167662796|gb|EDS06926.1| 16S rRNA methyltransferase GidB [Clostridium scindens ATCC 35704]
Length = 237
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+N Q++Q + L++WN+ MNLT + + EV+E+H DSL+++ + +H
Sbjct: 16 INEIQRKQFDDFYQLLVEWNKVMNLTGITEYGEVVEKHFVDSLSLVEVLDLENVNH---- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++DVGTGAG PG+ L IA P ++TLL+S+NKR FL+ + L ++ + G
Sbjct: 72 ------VIDVGTGAGFPGIPLKIAFPHLRITLLDSLNKRIKFLDTVIKELGLKDIHTIHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE+YD+ V+RAVA + L+EYCLP +RVGG+F++ K D +E+ S +
Sbjct: 126 RAEDYARQAEYREKYDLCVSRAVANLATLSEYCLPYIRVGGIFISYKSGDIDKEIYESGK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G L + + R+ V K + T KK+PR G P+K PL
Sbjct: 186 AVRILGGELEDIYRFQLPGTDIGRSFVKINKIKSTGKKFPRKAGLPSKEPL 236
>gi|406669704|ref|ZP_11076969.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
ignava CCUG 37419]
gi|405582754|gb|EKB56746.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
ignava CCUG 37419]
Length = 240
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 136/235 (57%), Gaps = 16/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q +Q Y + L++WN+KMNLTA+ + EV +H DSL + + +
Sbjct: 17 LTAQQLQQFEQYFELLVEWNQKMNLTAITEQEEVYLKHFYDSLMPLWLVPERF------- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+++VD+G GAG PG+ L I PD ++T+++S+NKR FL + L + + +
Sbjct: 70 -EGEVRIVDIGAGAGFPGIPLKIVQPDLQLTMVDSLNKRVTFLNEVIDQLGLTHTEAIHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G D REQYD+++ARAVA + +LAEYCLPLVR GG F+A KG Q+E++ ++
Sbjct: 129 RAEDFGHDRKHREQYDISIARAVAGLNVLAEYCLPLVRKGGYFIALKGQKAQQELEEAQG 188
Query: 239 AVQLMGA----SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +GA S +L +E +R + K+ TP KYPR G P K PL
Sbjct: 189 SLLKLGAKYEESHHELLPIEE----SEREILSIRKTLNTPNKYPRKAGKPTKSPL 239
>gi|291536996|emb|CBL10108.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis M50/1]
Length = 238
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 140/231 (60%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q Q Y + L++ N+ MNLTA+ + +EV+E+H DSL++ Y D+
Sbjct: 19 LNEKQISQFLKYYELLVETNKVMNLTAITEFDEVVEKHFLDSLSLC----RVYDLKIDA- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTGAG PG+ L IA P+ ++ L +S+NKR FL + +L ++ V
Sbjct: 74 -----KILDLGTGAGFPGIPLKIAFPNLELVLADSLNKRIKFLNQVIDELELKDITAVHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG++ +REQ+DV V+RAVA + L+EYC+P V+VGG F++ K +EEV +++
Sbjct: 129 RAEELGRNKDYREQFDVCVSRAVANLSSLSEYCIPFVKVGGKFISYKSGSIEEEVAEAKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + + + +R+ VV K + TPK YPR GTP K PL
Sbjct: 189 AVFVLGGKVTDVYKFDLYEQ--KRSFVVIDKEKHTPKAYPRKAGTPTKEPL 237
>gi|240145750|ref|ZP_04744351.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|257202166|gb|EEV00451.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|291539799|emb|CBL12910.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis XB6B4]
Length = 242
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 140/231 (60%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q Q Y + L++ N+ MNLTA+ + +EV+E+H DSL++ Y D+
Sbjct: 23 LNEKQISQFLKYYELLVETNKVMNLTAITEFDEVVEKHFLDSLSLC----RVYDLKIDA- 77
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTGAG PG+ L IA P+ ++ L +S+NKR FL + +L ++ V
Sbjct: 78 -----KILDLGTGAGFPGIPLKIAFPNLELVLADSLNKRIKFLNQVIDELELKDITAVHA 132
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG++ +REQ+DV V+RAVA + L+EYC+P V+VGG F++ K +EEV +++
Sbjct: 133 RAEELGRNKDYREQFDVCVSRAVANLSSLSEYCIPFVKVGGKFISYKSGSIEEEVAEAKK 192
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + + + +R+ VV K + TPK YPR GTP K PL
Sbjct: 193 AVFVLGGKVTDVYKFDLYEQ--KRSFVVIDKEKHTPKAYPRKAGTPTKEPL 241
>gi|418030655|ref|ZP_12669140.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351471714|gb|EHA31827.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 239
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ + T + D
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI--------TATFYVD- 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 67 -FNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|257866242|ref|ZP_05645895.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257873244|ref|ZP_05652897.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257875877|ref|ZP_05655530.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325567658|ref|ZP_08144325.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|420261813|ref|ZP_14764457.1| ribosomal RNA small subunit methyltransferase G [Enterococcus sp.
C1]
gi|257800200|gb|EEV29228.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257807408|gb|EEV36230.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257810043|gb|EEV38863.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325159091|gb|EGC71237.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|394771747|gb|EJF51508.1| ribosomal RNA small subunit methyltransferase G [Enterococcus sp.
C1]
Length = 238
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 135/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q E+ +Y + L++WN+KMNLTA+ + +EV +H DS+++ +++
Sbjct: 17 LTEEQMEKFAVYFERLVEWNQKMNLTAITEKSEVYLKHFYDSVSLA----------FETA 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L DVG+GAG P + L I P+ +VT+++S+NKR FL+ V+ QL NV +
Sbjct: 67 FDPQSHLCDVGSGAGFPSIPLKIVFPELEVTIVDSLNKRITFLQTLVTDLQLENVHLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ FR Q+D ARAVA + +L E C+PLV+ G F A K +EE+ ++
Sbjct: 127 RAETFGQNPQFRGQFDYVTARAVARLNVLTELCVPLVKKAGYFYALKAAKSEEELVEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G ++ S +R ++ K + TPKKYPR PG PAK P+
Sbjct: 187 AISLLGGKFIEEKSFTLPVSGDERHLLIIQKKKETPKKYPRKPGMPAKQPI 237
>gi|384177757|ref|YP_005559142.1| methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349596981|gb|AEP93168.1| methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 239
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVKTICDVGAGAGFPSLPIKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKMKNTPKKYPRKPGTPNKSPI 237
>gi|310644869|ref|YP_003949628.1| ribosomal RNA small subunit methyltransferase g [Paenibacillus
polymyxa SC2]
gi|309249820|gb|ADO59387.1| Ribosomal RNA small subunit methyltransferase G [Paenibacillus
polymyxa SC2]
gi|392305509|emb|CCI71872.1| 16S rRNA methyltransferase GidB [Paenibacillus polymyxa M1]
Length = 240
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 130/239 (54%), Gaps = 14/239 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNS 110
+ H +N Q EQ Y L++WN KMNLT + + V +H DS LA P+
Sbjct: 13 AEHSIVINDSQLEQFETYYRVLVEWNEKMNLTGITEREAVYTKHFYDSVSLAFYVPL--- 69
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
N L D+G+GAG PG+ L I P ++T+++S+NKR FL H V L
Sbjct: 70 ---------NDVESLADIGSGAGFPGIPLKICFPHIQLTIVDSLNKRIQFLAHVVEQLGL 120
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
NV+++ RAE LG+ +R+ YD+ ARAVA + +L E+CLP VR GG F A KG DP
Sbjct: 121 ENVELIHSRAEELGRKAGYRDSYDLVTARAVARLAVLNEFCLPFVREGGHFAAMKGSDPT 180
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE+ + +++ + + + + + R ++ K TP+KYPR PGTP K PL
Sbjct: 181 EEIMEASYSLKELKGRIKHVQAFQLPVEDAARHMIIIEKRAATPRKYPRKPGTPLKAPL 239
>gi|402814445|ref|ZP_10864039.1| ribosomal RNA small subunit methyltransferase G [Paenibacillus
alvei DSM 29]
gi|402508292|gb|EJW18813.1| ribosomal RNA small subunit methyltransferase G [Paenibacillus
alvei DSM 29]
Length = 241
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 10/227 (4%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q Q+ Y L++WN KMNLT + + V E+H DSL + H D S
Sbjct: 24 QWNQLDTYYRVLVEWNEKMNLTGITERELVYEKHFYDSLTL--------GFHVD--MMSV 73
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
++ D+G+GAG PG+ LAI P K+T+++S+NKR VFL H V L V + GRAE
Sbjct: 74 KRMADIGSGAGFPGIPLAIMFPHIKLTIVDSLNKRIVFLNHLVQELGLTGVSCIHGRAEE 133
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
+ + R+QYD+ ARAVA + +L E+CLP VR GG F A KG +PQEE+ ++R++Q+
Sbjct: 134 VARKPEHRDQYDLVTARAVARLNVLNEFCLPFVRPGGTFAAMKGTNPQEEIVEAKRSLQV 193
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +++ VV K TPK YPR PGTP K PL
Sbjct: 194 LQATFTADYALKLPVEQSDCHIVVMTKKGTTPKAYPRKPGTPLKTPL 240
>gi|381210640|ref|ZP_09917711.1| 16S rRNA methyltransferase GidB [Lentibacillus sp. Grbi]
Length = 238
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 130/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q+EQ Y L++WN K+NLTA+ + +V +H DS++ + +T
Sbjct: 17 LNEKQKEQFADYFQILVEWNEKINLTALTEEEDVYLKHFYDSIS--AAFYHDFTG----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
NL + DVG GAG P + L I PD VT+++S+ KR FL + L V
Sbjct: 70 ---NLVICDVGAGAGFPSIPLKICFPDINVTIVDSLQKRINFLNQLAAYLGLEKVAFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GKD FRE +D+ ++RAVA M +L+E CLPL + G+F+A KG +E+ + +
Sbjct: 127 RAENFGKDKQFRESFDIVISRAVARMSVLSELCLPLTKKNGMFIAMKGSQANDELNDGQN 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G L ++ + +R+ V K R+TPKKYPR PG P K P+
Sbjct: 187 AVDVLGGELDEIHIFQLPEEDSERSIVSIHKKRKTPKKYPRKPGLPNKSPI 237
>gi|260437681|ref|ZP_05791497.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
gi|292809907|gb|EFF69112.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
Length = 237
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN + ++ Y + L++ N+ MNLTA+ + +V+ +H DSL+II + S ++
Sbjct: 16 LNQDKINKLINYYELLIEKNKVMNLTAITEYKDVVIKHFADSLSIIKAVNMSEVTN---- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++D+GTGAG PG+VL I PD K+TLL+S+NKR FL ++ QL ++ + G
Sbjct: 72 ------IIDIGTGAGFPGMVLKIVFPDVKITLLDSLNKRVNFLNEVITELQLKDINAIHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE+YD+ V+RAVA + L+EYC+P V+VGG FV+ K + +EE+ ++++
Sbjct: 126 RAEDYAHNDIYREKYDLCVSRAVANLSTLSEYCIPYVKVGGKFVSYKAGECEEEINSAKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + + RT +V K R T KYPR G P+K PL
Sbjct: 186 AVNMLGGKIEEKIDFILPETDISRTFIVIGKLRNTSIKYPRKSGLPSKEPL 236
>gi|154483915|ref|ZP_02026363.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
gi|149735406|gb|EDM51292.1| 16S rRNA methyltransferase GidB [Eubacterium ventriosum ATCC 27560]
Length = 238
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 141/232 (60%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T+ Q E+ Y + L++ N+ MNLT++ + +EV+ +H DSL ++ N +
Sbjct: 17 TITEEQIEKFDKYYEMLIETNKVMNLTSITEYDEVIIKHFIDSLLVV----NIF------ 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + K++DVGTGAG PG+ + I P ++TLL+S+NKR FL + + L +++ V
Sbjct: 67 DINQSKKMIDVGTGAGFPGIPIKIMFPHLQITLLDSLNKRLKFLNNVIDELGLESIETVH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + + FREQYD+ V+RAVA + L+EYC+P + G F++ K EE++N++
Sbjct: 127 GRAEDIARKEEFREQYDLCVSRAVANLSTLSEYCIPFIAKNGKFISYKSSISSEEIQNAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G ++++ +V RT VV K+ T KKYPR GTP+K PL
Sbjct: 187 SAIKILGGAVVEEKTVHLPCSDMDRTFVVVNKTNNTGKKYPRKAGTPSKEPL 238
>gi|319891295|ref|YP_004148170.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
gi|317160991|gb|ADV04534.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
Length = 239
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 136/237 (57%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H TL+ Q++Q Y + L++WN K+NLT++ + +EV +H DS I P + +
Sbjct: 11 SEHGITLSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDS--ITPSFYHDF- 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N L L DVG GAG P + L I P+ VT+++++NKR FL +L
Sbjct: 68 -------NQPLNLCDVGAGAGFPSIPLKIIFPEIHVTIVDALNKRIQFLNQLAEALELEG 120
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+ V RAET K+ +R +DV ARAVA M +L+E C+PLV+ G+F+A K QEE
Sbjct: 121 VRFVHDRAETFAKNEDYRSSFDVVTARAVARMTVLSELCIPLVKKHGVFLALKSSKGQEE 180
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + AV ++G + ++ + + G+R V K +TPKKYPR PGTP K PL
Sbjct: 181 LEEARFAVGVLGGRIERVDTFDLPEDAGERQIVTIEKRSQTPKKYPRKPGTPNKSPL 237
>gi|206900779|ref|YP_002251265.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
gi|226797823|sp|B5YFF7.1|RSMG_DICT6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206739882|gb|ACI18940.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
Length = 240
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 142/235 (60%), Gaps = 18/235 (7%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q+E+ +LY AL +WNRK+NLT+++ E++ +H DSL+ I PI+N
Sbjct: 19 SLDPLQEEKFYLYYMALKEWNRKINLTSLEGEEEIILKHFVDSLSCIIPIRNENIE---- 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+++D+GTGAG PG+ + I +K+TLLES K+ +FLE + + +L +V+IV
Sbjct: 75 ------RIIDIGTGAGFPGIPIKIYDEKYKLTLLESQKKKILFLEELIKILELSDVEIVW 128
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE LGKD +REQ+D+A+AR VA+ I+ EY LP V+ GG+F+ + E +N++
Sbjct: 129 DRAENLGKDPRYREQFDLALARGVAKPNIVLEYALPFVKTGGIFLGQATPNNLSEWENAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRR---TPKKYPRDPGTPAKVPL 289
+ V ++G + + + + LK R+ TP+KYPR PG P K PL
Sbjct: 189 KVVGILGGKTEEKIEINFDN-----ITRIFLKIRKINNTPEKYPRRPGIPEKRPL 238
>gi|347533651|ref|YP_004840414.1| hypothetical protein RHOM_16890 [Roseburia hominis A2-183]
gi|345503799|gb|AEN98482.1| hypothetical protein RHOM_16890 [Roseburia hominis A2-183]
Length = 244
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 144/237 (60%), Gaps = 18/237 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYTS 113
L+ +Q Q Y + L++ N+ MNLTA+ + +EV+E+H DSL++ + I++ +
Sbjct: 19 LDEKQMGQFLTYYELLVETNKVMNLTAITEFDEVIEKHFLDSLSLCRVKDLRSIEDRPET 78
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
+ +++D+GTGAG PG+ L IA P ++ L +S+NKR FL+ + L +V
Sbjct: 79 Y---------RILDLGTGAGFPGIPLKIAFPKLQIVLADSLNKRIRFLQEVIDTLGLEDV 129
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
V GRAE +G++ +REQ+D+ V+RAVA + L+EYCLP V++GG F++ K + EE
Sbjct: 130 TAVHGRAEEMGRNTLYREQFDLCVSRAVANLSSLSEYCLPFVKMGGAFISYKSGEVDEEA 189
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++RA+ L+G + + + F Q R+ VV K R+TPK YPR GTP K PL
Sbjct: 190 AQAKRAIYLLGGEVKDIYKFDL---FDQKRSFVVIEKERKTPKAYPRKAGTPTKEPL 243
>gi|321313661|ref|YP_004205948.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|430756775|ref|YP_007207417.1| Methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|320019935|gb|ADV94921.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|430021295|gb|AGA21901.1| Methyltransferase GidB [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 239
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|16081152|ref|NP_391980.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312083|ref|ZP_03593930.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316408|ref|ZP_03598213.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321321|ref|ZP_03602615.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325604|ref|ZP_03606898.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402778271|ref|YP_006632215.1| 7-methylguanosine methyltransferase [Bacillus subtilis QB928]
gi|452912637|ref|ZP_21961265.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Bacillus
subtilis MB73/2]
gi|121190|sp|P25813.1|RSMG_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|40027|emb|CAA44405.1| unnamed protein product [Bacillus subtilis]
gi|467384|dbj|BAA05230.1| unknown [Bacillus subtilis]
gi|2636647|emb|CAB16137.1| 7-methylguanosine methyltransferase (16S rRNA, nucleotide G527)
[Bacillus subtilis subsp. subtilis str. 168]
gi|402483450|gb|AFQ59959.1| 7-methylguanosine methyltransferase specific forthe [Bacillus
subtilis QB928]
gi|407962955|dbj|BAM56195.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BEST7613]
gi|407966967|dbj|BAM60206.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BEST7003]
gi|452117665|gb|EME08059.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Bacillus
subtilis MB73/2]
Length = 239
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|56554498|pdb|1XDZ|A Chain A, Crystal Structure Of Gram_positive Bacillus Subtilis
Glucose Inhibited Division Protein B (Gidb), Structural
Genomics, Mcsg
Length = 240
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 17 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 127 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 187 KAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 238
>gi|145351446|ref|XP_001420088.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580321|gb|ABO98381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 131/209 (62%), Gaps = 7/209 (3%)
Query: 83 LTAVKDVNEVMERHIDDSLAIIPPIKN-SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAI 141
LT EV+E H D+LA++ + S T D++ +++DVG+GAGLPG+ LAI
Sbjct: 2 LTGATSAEEVLESHASDALALLKVFDDASETIGSDAT-----RVLDVGSGAGLPGIPLAI 56
Query: 142 ACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201
A P W+ TLL+++ KR FLE L NV +V GRAE LG+D +RE +DV ARAV
Sbjct: 57 ARPGWRFTLLDTLRKRTNFLEATTREIGLTNVDVVWGRAEDLGRDEKWRESFDVVTARAV 116
Query: 202 AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG- 260
AE+R+LAE+C+PL RVGG +++ K +E++++ AV ++G + SV+S P G
Sbjct: 117 AELRVLAEFCVPLARVGGYWISPKNAAVADEIRDAVNAVTILGGGAMCAESVDSIGPDGN 176
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+RTAVVC K TP KYPR G K PL
Sbjct: 177 KRTAVVCEKLSPTPDKYPRRAGMAKKRPL 205
>gi|414160160|ref|ZP_11416431.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878810|gb|EKS26680.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 240
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 130/237 (54%), Gaps = 11/237 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
+H TLN +Q++Q Y + L++WN KMNLT++ D +EV +H DS+ T+
Sbjct: 12 THGITLNDQQKQQFQTYYEMLVEWNEKMNLTSITDESEVYLKHFYDSI----------TA 61
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
L + DVG GAG P + L I P KVT+++S+NKR FL H L V
Sbjct: 62 AFYVDMTKELSICDVGAGAGFPSIPLKIVFPQLKVTIVDSLNKRIQFLNHLADALGLQGV 121
Query: 174 QIVRGRAETLGKD-VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V RAE G RE YD+ ARAVA + +L+E CLPLV+ GG FVA K +EE
Sbjct: 122 SFVHERAENFGNTRGDNRESYDIVTARAVARLTVLSELCLPLVKTGGHFVAMKSSKGEEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + A+ + G + + + E G+R ++ K +TPKKYPR GTP K PL
Sbjct: 182 LEEARFAIGVFGGRVEAVETFELPEDAGERQIIIIEKRSKTPKKYPRKAGTPNKSPL 238
>gi|449096562|ref|YP_007429053.1| 16S rRNA methyltransferase [Bacillus subtilis XF-1]
gi|449030477|gb|AGE65716.1| 16S rRNA methyltransferase [Bacillus subtilis XF-1]
Length = 239
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVDSLNKRITFLEKLSEGLQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKMKNTPKKYPRKPGTPNKSPI 237
>gi|386760814|ref|YP_006234031.1| 16S rRNA methyltransferase GidB [Bacillus sp. JS]
gi|384934097|gb|AFI30775.1| 16S rRNA methyltransferase GidB [Bacillus sp. JS]
Length = 239
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENVHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|51894468|ref|YP_077159.1| glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
gi|81610303|sp|Q67J35.1|RSMG_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51858157|dbj|BAD42315.1| Glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
Length = 246
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 135/230 (58%), Gaps = 15/230 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E + L++D + +WN +MNLTA+ D E++ +H D+ + + +
Sbjct: 27 EAVLLHLDLVREWNERMNLTAITDPQEMVIKHALDA----------ASGLAVAGVEPGQR 76
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVS-----LTQLLNVQIVRGR 179
++DVGTGAG PG+V P +TLLES+ KRC FLE L Q+V GR
Sbjct: 77 VIDVGTGAGFPGVVWKCLRPGIDLTLLESLQKRCRFLEEVGQAVIGPLAGGEGYQVVWGR 136
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE +G++ + RE+YD+ ARAVAE+R+LAEYCLPL RVGG F+A KG EE+ +E A
Sbjct: 137 AEDVGRNPAHRERYDLVTARAVAELRVLAEYCLPLARVGGRFLAMKGPSVGEEILAAEAA 196
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
V+ +G L ++ +E G+R+ V+ K R TPK YPR G PAK PL
Sbjct: 197 VEKLGGRLEEVRELELPDGGGRRSLVLIRKERPTPKAYPRRAGVPAKSPL 246
>gi|398309096|ref|ZP_10512570.1| 16S rRNA methyltransferase GidB [Bacillus mojavensis RO-H-1]
Length = 239
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 126/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDIRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENTYSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|428281782|ref|YP_005563517.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
gi|291486739|dbj|BAI87814.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
Length = 239
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY D L++WN K+NLT++ + EV +H DS+ T+
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSI----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVG GAG P L + I P VT+++S+NKR FLE QL N
Sbjct: 66 DFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVDSLNKRITFLEKLSEALQLENTTYCH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K +EE+ +
Sbjct: 126 DRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L + S + R +V K + TPKKYPR PGTP K P+
Sbjct: 186 KAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 237
>gi|293374960|ref|ZP_06621256.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325844326|ref|ZP_08168102.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
gi|292646437|gb|EFF64451.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325489193|gb|EGC91575.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
Length = 237
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q+ Q+H Y + L++WN KMNLT + +VNEV +H DSL K+ + C+S
Sbjct: 17 LTEEQKWQLHRYFELLVEWNEKMNLTGITEVNEVYLKHFYDSLLAFLMFKDIHK--CESL 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG+GAG P L + I P K+ L++S+ KR FL H ++ T+L N++
Sbjct: 75 C-------DVGSGAGFPALPVKIVYPHLKMDLVDSLGKRVNFLNHVIAETKLQNIKAYHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE RE +D+ ARAVA + +L+E C+PLV+ GG F+A KG EE+K S++
Sbjct: 128 RAEEYAD--KHRESFDIVTARAVARLNVLSELCVPLVKEGGFFIALKGQTGDEELKESKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ G ++++ +E G RT + K ++TP KYPR G P+
Sbjct: 186 ALETFGVEIIEVKHIELPEEAGTRTNIYTKKYKKTPNKYPRAYGQIKNKPI 236
>gi|385826578|ref|YP_005862920.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
gi|329668022|gb|AEB93970.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 9/234 (3%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE LN +QQ+Q Y D L+++N+K+NLT + D NEV +H DS+ + + +
Sbjct: 15 FE-LNEKQQKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSITPLLEFPDLFKGEK 73
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
L DVG GAG P L + I CP+ +T+++S+ KR FL+ V+ L V +
Sbjct: 74 --------TLCDVGAGAGFPSLPIKILCPNLSITIVDSLGKRLKFLDELVNDLDLDKVTL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V RAE G++ RE++D+ RAVA M +L+EYCLPL +VGG VA KG Q+E+
Sbjct: 126 VHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPLAKVGGYLVALKGPKAQDELAE 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++G + + + RT +V K + TPKKYPR GTP K PL
Sbjct: 186 AKHAIDVLGGKVEDVKELTLPDTDDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|392530423|ref|ZP_10277560.1| 16S rRNA methyltransferase GidB [Carnobacterium maltaromaticum ATCC
35586]
gi|414085734|ref|YP_006994448.1| 16S rRNA methyltransferase GidB [Carnobacterium maltaromaticum
LMA28]
gi|412999324|emb|CCO13133.1| 16S rRNA methyltransferase GidB [Carnobacterium maltaromaticum
LMA28]
Length = 238
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 134/233 (57%), Gaps = 13/233 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y+ L +WN K+NLTA+ + EV +H DS I+ + + + S
Sbjct: 17 LTDKQMHQFDQYLKLLQEWNEKINLTAITEEEEVYLKHFYDS--ILAGLYVDFKTGVQSL 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P + L I P VT+++S+NKR FL + +L +V
Sbjct: 75 C-------DVGAGAGFPSIPLKIVFPSLSVTIVDSLNKRIQFLNTLANELELEDVHFYHD 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ FRE +D ARAVA+M +L E CLPLV+ GGLF+A K + EE+K +R
Sbjct: 128 RAETFGQNKQFRESFDFVTARAVAKMSVLTELCLPLVKKGGLFIALKASNSDEEMKEGDR 187
Query: 239 AVQLMGASLLQ--LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + + +C + ++ G+R ++ K + TPK YPR PGTP + PL
Sbjct: 188 AIRLLGGKVREDIVCQLPREA--GERHIILIDKKKETPKTYPRKPGTPNRKPL 238
>gi|336421476|ref|ZP_08601634.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000755|gb|EGN30902.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_57FAA]
Length = 237
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+N Q++Q + L++WN+ MNLT + + EV+E+H DSL+++ + +H
Sbjct: 16 INEIQRKQFDDFYQLLVEWNKVMNLTGITEYGEVVEKHFVDSLSLVEVLDLENVNH---- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++DVGTGAG PG+ L IA P ++TLL+S+NKR FL+ + L ++ + G
Sbjct: 72 ------VIDVGTGAGFPGIPLKIAFPHLRITLLDSLNKRIKFLDTVIKELGLKDIHTIHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE+YD+ V+RAVA + L+EYCLP +RVGG+F++ K + +E+ S +
Sbjct: 126 RAEDYARQAEYREKYDLCVSRAVANLATLSEYCLPYIRVGGIFISYKSGNIDKEISESGK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G L + + R+ V K + T KK+PR G P+K PL
Sbjct: 186 AVRILGGELEDIYRFQLPGTDIGRSFVKINKIKSTGKKFPRKAGLPSKEPL 236
>gi|116874155|ref|YP_850936.1| 16S rRNA methyltransferase GidB [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|123461489|sp|A0AMC5.1|RSMG_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116743033|emb|CAK22157.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 238
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + +TS DS
Sbjct: 17 LSATQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISATFYV--DFTS-FDSI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P + + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSIPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +LAE C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLAELCIPLVKKGGSFLVMKAAQAEQELQIAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G ++ S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVVDHFSFLLPVEESERNIYVINKTKETPNKYPRKPGTPNKLPI 237
>gi|116630298|ref|YP_815530.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri ATCC 33323]
gi|282852937|ref|ZP_06262278.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|420148126|ref|ZP_14655398.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gasseri CECT 5714]
gi|122272765|sp|Q040U0.1|RSMG_LACGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116095880|gb|ABJ61032.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus gasseri ATCC
33323]
gi|282556045|gb|EFB61666.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|398400284|gb|EJN53849.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gasseri CECT 5714]
Length = 239
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
++H L+ +Q+EQ Y + L+++N+K+NLT + D NEV +H DS I P ++ S
Sbjct: 11 ANHGFKLSNKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDS--ITPLLEFSDL 68
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ S L DVG GAG P L + I CPD +T+++S+ KR FL+ ++ L
Sbjct: 69 FKGEKS------LCDVGAGAGFPSLPIKILCPDLSITIVDSLGKRLKFLDELINDLSLDK 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V +V RAE G++ + RE++D+ RAVA M +L+EYC+PL +V G VA KG Q+E
Sbjct: 123 VTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCIPLAKVDGYLVALKGPKAQDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A++++G + ++ + +RT +V K + TPKKYPR GTP K PL
Sbjct: 183 LVEAKNAIEVLGGRVEEVKELTLPDTDDERTLIVVKKVKATPKKYPRQAGTPNKKPL 239
>gi|261410103|ref|YP_003246344.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
gi|261286566|gb|ACX68537.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
Length = 240
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 134/237 (56%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
H T++ +Q Q +Y + L++WN KMNLT + + +V +H DS+ +
Sbjct: 13 GEHGITIDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITL--------A 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ D + NL D+G+GAG PG+ L I P K+T+++S+NKR FL+H L
Sbjct: 65 FYVDMNKIGNL--ADIGSGAGFPGIPLKICFPHLKLTIVDSLNKRITFLKHVADTLGLSG 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
++++ GRAE + + +R+ +D+ ARAVA M +L E+CLP +VGG F A KG DP +E
Sbjct: 123 IELIHGRAEEVARKHGYRDGFDLVTARAVARMAVLNEFCLPFTKVGGQFAAMKGSDPTDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK + R+++ + +L ++ S R VV K TP KYPR GT +K P+
Sbjct: 183 VKEAARSLKELRGALNKVHSFSLPVEESGRHIVVIDKKGATPSKYPRKAGTASKTPI 239
>gi|452991712|emb|CCQ96936.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
ultunense Esp]
Length = 238
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN + + LY + L +WN+K+N+T++ D E+ +H DS I P+ +
Sbjct: 18 LNKDEIDSFILYKELLKEWNQKINITSITDDEEIDIKHFIDS---ITPLSTDLFAE---- 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+++++D+GTG G PG+ L I D +V LL+S+ KR FLE + L + + G
Sbjct: 71 ---DVRMIDIGTGGGFPGIPLKIINRDMEVVLLDSLKKRITFLEDIIDKLALEKIFPIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LG+D + RE+YD+A++RAVA + L+EYCLP V+VGG F++ KG D EE+K +E+
Sbjct: 128 RAEELGRDKNHREKYDIAISRAVASLNTLSEYCLPFVKVGGFFISMKGPDVDEELKEAEK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G +L + V + ++ K + TP KYPR G P K PL
Sbjct: 188 SIKILGGNLNDVKVVNLPLSDITHSLIIIEKIKGTPTKYPRGGGKPKKKPL 238
>gi|332800540|ref|YP_004462039.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
acetatoxydans Re1]
gi|438003949|ref|YP_007273692.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Tepidanaerobacter acetatoxydans Re1]
gi|332698275|gb|AEE92732.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
acetatoxydans Re1]
gi|432180743|emb|CCP27716.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Tepidanaerobacter acetatoxydans Re1]
Length = 238
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 144/236 (61%), Gaps = 11/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H L+ Q Q+ ++ LL+ N+ +NLT++ + + ++H+ DSL I+ I+ + +
Sbjct: 14 GHDIELSDEQILQLDVFRSLLLERNKMVNLTSITEPEDFAKKHVIDSLMIVKHIEIDHEA 73
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
K++DVGTG G+PGL+L I PD +++LLES+ K+ FL + + +V
Sbjct: 74 ----------KIMDVGTGPGIPGLILKIYRPDIELSLLESVRKKTDFLRDVIGKMNISDV 123
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
Q++ GRAE +G D+ RE YD+ VARAV+ + +L E CLP VR+GG+F+A KG PQ+E+
Sbjct: 124 QVINGRAEEVGHDIKHRESYDIVVARAVSSLNVLLELCLPFVRLGGVFIAMKGGLPQQEI 183
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++S++A++++G +++ C + R ++ K + P KYPR G P K PL
Sbjct: 184 ESSQKALKILGGKIVK-CQEYVLNEGLMRNLIIISKEQNCPDKYPRRSGIPGKNPL 238
>gi|422417293|ref|ZP_16494250.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
gi|313621875|gb|EFR92552.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
Length = 238
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHXXDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +LAE C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLAELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFSFALPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|210624044|ref|ZP_03294161.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
gi|210153251|gb|EEA84257.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
Length = 241
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T + + ++ +Y + L +WNRKMNLT + D +H DS++ +K Y
Sbjct: 19 TADDKTLDRFRMYRELLAEWNRKMNLTGIDDEKGTYIKHFLDSVS---AVKGGYIK---- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ ++DVGTGAG PG+ L + + KVTLL+S+NKR FL+ + +L +V+ +
Sbjct: 72 ---DGMSIIDVGTGAGFPGVPLKVCLENTKVTLLDSLNKRINFLQEVCNQLELEDVEFIH 128
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE GK+ +REQYDVA ARAVA + IL E+C+P ++VGG FV KG + E++ S+
Sbjct: 129 GRAEDFGKNPDYREQYDVATARAVAGLPILMEFCVPFIKVGGYFVCLKGPNADLELEESK 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ ++ +V K TP KYPR G PAK P+
Sbjct: 189 KAMEVLGIEFVEKLDIQLPETDLNHNILVFKKVSETPSKYPRKAGKPAKSPI 240
>gi|427406718|ref|ZP_18896923.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. F0473]
gi|425708148|gb|EKU71189.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. F0473]
Length = 285
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ EQ Y LL+WN +MNLTA+ +V +HI DSLA +Y +
Sbjct: 20 LTDRQLEQFSRYNALLLRWNERMNLTALTSPEDVAVKHIVDSLA-------AYDEDLFAR 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ LVDVGTGAG PGL LAI P VTL++++ KR FLE AV +L NV +
Sbjct: 73 AQT---LVDVGTGAGFPGLPLAIYAPHVSVTLMDALKKRIAFLEEAVRELRLTNVACIHA 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++REQYD+AV+RAVA + +L EY LP VRVGG F+A KG + E+ S
Sbjct: 130 RAEGAARTHTYREQYDIAVSRAVARLPVLVEYALPFVRVGGTFLALKGRVYRAEMAESTA 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+L+G ++ V R V K R TP YPR G P K PL
Sbjct: 190 AVRLIGGGEMRARPVSLPGLDDVRAVVYIRKERPTPDAYPRRAGLPGKEPL 240
>gi|336054877|ref|YP_004563164.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
kefiranofaciens ZW3]
gi|333958254|gb|AEG41062.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
kefiranofaciens ZW3]
Length = 240
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 140/237 (59%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q+EQ LY + L+++N+ +NLT + +EV +H DS I P+ T
Sbjct: 11 SKHNFQLTDKQKEQFKLYFNFLIEFNQHVNLTRITAEDEVYLKHFYDS---ITPLFVFGT 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P +VT+++S+ KR FL+ ++ L N
Sbjct: 68 IFKDGAS-----LCDVGAGAGFPSIPLKILKPTLRVTIVDSLAKRLTFLKELIAKLGLDN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ GG FVA KG Q E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDIVTARAVARMSVLSEYCLPLVKQGGYFVALKGPKAQAE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + +A+ +G L++ + +RT V+ K + TPKKYPR GTP + P+
Sbjct: 183 LDDGSKAITTLGGKLIKAEELTLPESEEERTLVLMQKIKPTPKKYPRQAGTPRRKPI 239
>gi|302393072|ref|YP_003828892.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
gi|302205149|gb|ADL13827.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
Length = 240
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L ++Q + Y+D L +WN+KMNLTA+ D E++ +H DSL S S D +
Sbjct: 18 LTSKQIDAFMNYLDILQEWNQKMNLTAIDDSEEIVIKHFLDSL--------SSVSVMDLA 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ K++D+GTGAG PG+ L I P +TLL+S K+ FL++ V L ++ + G
Sbjct: 70 GDE--KMIDLGTGAGFPGIPLKIFYPKLDLTLLDSTKKKITFLKNLVRELNLKGIEFIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ +R YDV +ARAVA + IL+EY +P ++ G F+A KG +EEV + R
Sbjct: 128 RAEDYGQKSKYRGSYDVVIARAVAPLNILSEYAIPFLKPTGSFLAQKGAKVKEEVIEATR 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++GA + + S++ +R V+ K R TP +YPR GTP K P+
Sbjct: 188 AIEVLGAEIYDVVSIDLPYSDAKRNLVIIDKVRETPLEYPRKAGTPNKEPI 238
>gi|325663374|ref|ZP_08151824.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470828|gb|EGC74058.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
Length = 240
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ RQ+EQ L+ + L++WN MNLT + + EV E+H DS++I+ +
Sbjct: 16 VLDDRQKEQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAM---------- 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S ++DVGTGAG PG+ L I P+ +V LL+S+NKR FL + QL ++ +
Sbjct: 66 DMKSVKSVIDVGTGAGFPGIPLKIVFPELEVVLLDSLNKRVKFLNAVIEKLQLKGIRAIH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE K +REQ+D+ V+RAVA + L+EYCLP V+ G+F+ K + EEV ++
Sbjct: 126 GRAEDYAKQQEYREQFDLCVSRAVANLATLSEYCLPYVKKDGVFLPYKSGEIDEEVVQAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+AV ++G +L ++ + R+ V K + T K+YPR G PAK PL
Sbjct: 186 KAVTILGGTLREVIKFQLPGSEIGRSFVKIEKVKPTAKRYPRKAGLPAKEPL 237
>gi|326692159|ref|ZP_08229164.1| 16S rRNA methyltransferase GidB [Leuconostoc argentinum KCTC 3773]
Length = 239
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 11/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q Y D L+ N +NLTA+ + +V +H DSL + +
Sbjct: 17 LTENQIQQFEQYFDMLVATNAHVNLTAITEKKDVYLKHFYDSLTV--------AQYEKDL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+N L+DVGTGAG P L L IA P+ ++T+++++ KR FL+ V+ + V IV G
Sbjct: 69 QQTNGTLIDVGTGAGFPSLPLKIAFPNLQITMVDALQKRVKFLQDVVTTLGITGVTIVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+D +REQ+D A ARAVA +LAEY LP V++GG F+ KG ++E+ + ++
Sbjct: 129 RAEDIGQDPKYREQFDYATARAVARTSVLAEYTLPFVKIGGEFLVMKGSAAEQELADGQK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L + S E P G R + K+++TPKKYPR GTP+K P+
Sbjct: 189 ALATLGGQLRE--SFEFTLPNGDTRYVQIVDKNKKTPKKYPRQAGTPSKKPI 238
>gi|229917463|ref|YP_002886109.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
gi|259495495|sp|C4L001.1|RSMG_EXISA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229468892|gb|ACQ70664.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
Length = 238
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y + L++WN KMNLTA+ D EV +H DSL S H D +
Sbjct: 17 LSETQLSQFKRYFEMLVEWNEKMNLTAITDREEVYLKHFYDSL--------SAAFHFDFT 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ DVG GAG P L L I P VT+++S+NKR FL L V G
Sbjct: 69 KVETV--CDVGAGAGFPSLPLKILFPHLHVTIIDSLNKRITFLNELALALGLEGVAFHHG 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FREQ+DV ARAVA M +LAEYCLPL +VGG FVA K +E+ +++
Sbjct: 127 RAEEFGKNKKFREQFDVVTARAVARMTVLAEYCLPLAKVGGSFVALKAAKVSDEMADAKN 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G +R VV K R+TP KYPR GTPAK PL
Sbjct: 187 ALAVLGGKEKATHQFLLPGEMSERNIVVVDKLRKTPGKYPRKAGTPAKEPL 237
>gi|284049395|ref|YP_003399734.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
gi|283953616|gb|ADB48419.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
Length = 237
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 139/232 (59%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ +Q +Q Y D LL+ N+ +NLTA+ D EV +H+ DSL + P + +H
Sbjct: 17 TLSEKQLDQFTRYADLLLETNKSLNLTAITDPEEVAVKHMVDSLLVYDP--ERFHNHT-- 72
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+VDVGTGAG PGL L I P +VTL++S+ KR FLE V L V+
Sbjct: 73 -------IVDVGTGAGFPGLPLKIYDPGMRVTLIDSLQKRLNFLEQVVKDLGLGQVRCTH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GKD + RE++DVAVARAVA + +LAEYCLPLVRVGG+F A KG QEEV +
Sbjct: 126 ARAEDAGKDPALREKFDVAVARAVAALPVLAEYCLPLVRVGGVFYAMKGSRYQEEVDAAH 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G + ++ V+ QR + K R TPK+YPR GT K PL
Sbjct: 186 HAVEVLGGKITEVRPVQLPGLTDQRAIITIKKVRPTPKQYPRKAGTAVKKPL 237
>gi|347550125|ref|YP_004856453.1| putative GidB protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346983196|emb|CBW87248.1| Putative GidB protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 238
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
LN Q +Q H Y + L++WN KMNLTA+ + EV +H DS++ + N + S CD
Sbjct: 17 LNEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD- 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
VG GAG P + + I P +V++++S+ KR FL+ L NV
Sbjct: 76 ----------VGAGAGFPSIPIKICFPHLEVSIVDSLKKRMTFLDALAEKLALTNVHFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ + RE+YD+ ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E
Sbjct: 126 DRAETFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ S +R V K++ TP KYPR PGTP K+P+
Sbjct: 186 KAIKVLGGKVVNHFSFSLPIEESERNIYVIAKTKETPNKYPRKPGTPNKLPI 237
>gi|254827370|ref|ZP_05232057.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|255016996|ref|ZP_05289122.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL F2-515]
gi|255025452|ref|ZP_05297438.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-003]
gi|386045108|ref|YP_005963913.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|404412052|ref|YP_006697640.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC5850]
gi|404414879|ref|YP_006700466.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC7179]
gi|258599748|gb|EEW13073.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|345538342|gb|AEO07782.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|404231878|emb|CBY53282.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC5850]
gi|404240578|emb|CBY61979.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC7179]
Length = 238
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVKEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|219849945|ref|YP_002464378.1| 16S rRNA methyltransferase GidB [Chloroflexus aggregans DSM 9485]
gi|254766886|sp|B8G6Y3.1|RSMG_CHLAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219544204|gb|ACL25942.1| methyltransferase GidB [Chloroflexus aggregans DSM 9485]
Length = 238
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 141/233 (60%), Gaps = 16/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y+D L+ WN + NLTA++D + ++ RH+ DSL Y + +
Sbjct: 20 LSEHQYAQFQRYLDELIIWNDRFNLTAIRDRSAMIRRHLLDSL---------YLARDWQT 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+NL +D+G+GAG P L L IA P VTL+E+ K+ FL H + +L +V+++
Sbjct: 71 APANL--IDIGSGAGFPALPLKIAYPTLPVTLVEATGKKAEFLRHVIECLELTDVRVLHE 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
R ET+G++++ REQY+V ARAVAE+R+L EY LPL+R+GG +A KG DP +E+ ++R
Sbjct: 129 RIETVGRNLAEREQYEVVTARAVAELRVLVEYALPLLRIGGRLLAPKGRDPTDEIAAAQR 188
Query: 239 AVQLMGA--SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G S + + + P R+ V+ K TP ++PR G PA+ PL
Sbjct: 189 ALHVLGGEVSACEPVHIPGEEP---RSLVIITKIAPTPSRFPRAIGIPARRPL 238
>gi|392961584|ref|ZP_10327040.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans DSM 17108]
gi|421055498|ref|ZP_15518461.1| methyltransferase GidB [Pelosinus fermentans B4]
gi|421060336|ref|ZP_15522831.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans B3]
gi|421072380|ref|ZP_15533491.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A11]
gi|392439881|gb|EIW17582.1| methyltransferase GidB [Pelosinus fermentans B4]
gi|392446017|gb|EIW23319.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A11]
gi|392453592|gb|EIW30464.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans DSM 17108]
gi|392457361|gb|EIW34037.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans B3]
Length = 238
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L Q + Y + L++WN+K+NLTA+ D NEV +H+ DSL + +
Sbjct: 17 SLTEEQLTRFSQYFELLIEWNQKINLTAITDPNEVAVKHMIDSL----------SCYDKV 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ K++DVGTGAG PGL L I PD K+TL +S+NKR +FL+ ++ +++ +
Sbjct: 67 IFKNGAKIIDVGTGAGFPGLPLKIYRPDLKLTLFDSLNKRILFLKEVAEKLEIPDIEFIH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G++ FRE YD+AV+RAVA + IL+E CLP V VGG F+A KG +E+K S
Sbjct: 127 SRAEDGGRNKQFREVYDMAVSRAVARLSILSELCLPFVAVGGFFIALKGSQYSQEIKEST 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++ +++ R V K ++T YPR PG K PL
Sbjct: 187 SALRVLGGEIDKIDNIKLPGLDDIRAVVYIRKIKKTLPAYPRRPGIAEKNPL 238
>gi|16804839|ref|NP_466324.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes EGD-e]
gi|47095609|ref|ZP_00233217.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|254913057|ref|ZP_05263069.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|254937438|ref|ZP_05269135.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|255028091|ref|ZP_05300042.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes LO28]
gi|284800312|ref|YP_003412177.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284993497|ref|YP_003415265.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|386048535|ref|YP_005966867.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|386051785|ref|YP_005969776.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL R2-561]
gi|404285311|ref|YP_006686208.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2372]
gi|405759867|ref|YP_006689143.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2479]
gi|20177887|sp|Q8Y3N3.1|RSMG_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16412302|emb|CAD01015.1| GidB protein [Listeria monocytogenes EGD-e]
gi|47016039|gb|EAL06964.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|258610040|gb|EEW22648.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|284055874|gb|ADB66815.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284058964|gb|ADB69903.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|293591057|gb|EFF99391.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|345535526|gb|AEO04967.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|346425631|gb|AEO27156.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL R2-561]
gi|404234813|emb|CBY56216.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2372]
gi|404237749|emb|CBY59151.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2479]
Length = 238
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|222152552|ref|YP_002561727.1| 16S rRNA methyltransferase GidB [Streptococcus uberis 0140J]
gi|254766906|sp|B9DTP3.1|RSMG_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222113363|emb|CAR40979.1| methyltransferase GidB [Streptococcus uberis 0140J]
Length = 237
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 137/232 (59%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+EQ +Y L++WN K+NLTA+ + N+V +H DS+A PI + Y
Sbjct: 17 LNDFQKEQFDIYFQTLVEWNDKINLTAITEKNDVYLKHFYDSIA---PILHGYIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P + + I P +T+++S+NKR FL+ + L V G
Sbjct: 69 -NEPIKLLDIGAGAGFPSIPMKIIYPQLDITIIDSLNKRITFLKQLSEVLHLEGVHFFHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D++FR Q+D+ ARAVA M+IL+E +P +++ G +A K +E+ +++
Sbjct: 128 RAEDFGQDINFRAQFDIVTARAVARMQILSELTIPFLKLNGKLLALKAQAVDQELTDAQN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+ + +++ + Q P G R + K + TP+KYPR GTP K PL
Sbjct: 188 ALKLLFSQVIE--NNHYQLPNGDSRYITIVEKKKETPRKYPRKAGTPNKKPL 237
>gi|329925034|ref|ZP_08279978.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
gi|328940153|gb|EGG36485.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
Length = 240
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 133/237 (56%), Gaps = 10/237 (4%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
H ++ +Q Q +Y + L++WN KMNLT + + +V +H DS+ +
Sbjct: 13 GEHGIKIDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITL--------A 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ D + NL D+G+GAG PG+ L I P K+T+++S+NKR FL+H L
Sbjct: 65 FYVDMNKIGNL--ADIGSGAGFPGIPLKICFPHLKLTIVDSLNKRITFLKHVADTLGLSE 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+++ GRAE + + +R+ +D+ ARAVA M +L E+CLP +VGG F A KG DP EE
Sbjct: 123 VELIHGRAEEVARKHGYRDGFDLVTARAVARMAVLNEFCLPFTKVGGQFAAMKGSDPTEE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK + R+++ + +L ++ S R VV K TP KYPR GT +K P+
Sbjct: 183 VKEAARSLKELRGALNKVHSFSLPVEESGRHIVVIDKKGATPTKYPRKAGTASKTPI 239
>gi|315039148|ref|YP_004032716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325957619|ref|YP_004293031.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|385818326|ref|YP_005854716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL1118]
gi|312277281|gb|ADQ59921.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325334184|gb|ADZ08092.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|327184264|gb|AEA32711.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL1118]
Length = 240
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 142/237 (59%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q++Q LY L++ N +NLT + + +EV +H DS I P+
Sbjct: 11 SKHNFELTDKQKQQFKLYFKMLIEVNEHVNLTRITEEDEVYLKHFYDS---ITPLFTFGA 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P KVT+++S+ KR FL+ +S L +
Sbjct: 68 VFKDGAT-----LCDVGAGAGFPSIPLKILKPGLKVTIVDSLQKRLNFLKDLISELGLTD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ GG FVA KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYRERFDIVTARAVARMSVLSEYCLPLVKKGGYFVALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + ++A++++G L++ + + +RT V+ K + TPKKYPR GTP + P+
Sbjct: 183 LDDGKKALEVLGGKLIKDEELTLPASEEERTLVLVQKVKSTPKKYPRQAGTPRRKPI 239
>gi|323486762|ref|ZP_08092081.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323694904|ref|ZP_08109054.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|355629821|ref|ZP_09050592.1| hypothetical protein HMPREF1020_04671 [Clostridium sp. 7_3_54FAA]
gi|323399901|gb|EGA92280.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323500994|gb|EGB16906.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|354818969|gb|EHF03427.1| hypothetical protein HMPREF1020_04671 [Clostridium sp. 7_3_54FAA]
Length = 242
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 134/231 (58%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ EQ + Y + L+ WN +NLTA+ ++EV+ +H DSL++ I D
Sbjct: 20 LTERQIEQFYNYYELLIHWNSMINLTAITQLDEVVTKHFVDSLSLKKII-------VDIG 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S L+DVGTGAG PG+ L IA P+ K+TLL+S+NKR FL V QL N+ V G
Sbjct: 73 QKSQ-SLIDVGTGAGFPGIPLKIAFPELKITLLDSLNKRVKFLNEVVETLQLDNITAVHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D RE +D+ V+RAVA + LAEYC+P V+VGG FV K +EE+ N
Sbjct: 132 RAEDYGRDNVSRETFDICVSRAVANLSTLAEYCMPFVKVGGCFVPYKSGKLEEELANGRG 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+ + + ++ + + +R+ V K+ KKYPR G P+K PL
Sbjct: 192 AVKKLSGEIEEIITFTLPNA-DERSLVKIRKTAPLNKKYPRKAGMPSKEPL 241
>gi|172059047|ref|YP_001815507.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
gi|229558761|sp|B1YGA6.1|RSMG_EXIS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991568|gb|ACB62490.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ Q +Q Y + L++WN KMNLTA+ D V +H DS I +T ++
Sbjct: 17 VSDHQLQQFRKYYELLVEWNEKMNLTAITDEEGVYLKHFYDS--ITAAFYFDFTK-VETV 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KVT+++S+NKR FL + L V G
Sbjct: 74 C-------DVGAGAGFPSLPIKIMFPHLKVTIIDSLNKRIGFLNMLATELGLEGVAFHHG 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FRE +DV ARAVA M +LAEYCLPL RVGG FVA K EE++
Sbjct: 127 RAEEFGKNKQFREHFDVVTARAVARMSVLAEYCLPLARVGGQFVALKAAKLGEELEEGAT 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +L + + +R V+ K R TP KYPR GTPAK PL
Sbjct: 187 ALKVLGGNLRESFQFQLPGEESERNIVIVDKKRLTPGKYPRKAGTPAKDPL 237
>gi|254824832|ref|ZP_05229833.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|254851894|ref|ZP_05241242.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|254930924|ref|ZP_05264283.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|254992360|ref|ZP_05274550.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-064]
gi|255024123|ref|ZP_05296109.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-208]
gi|300763440|ref|ZP_07073438.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|404282375|ref|YP_006683273.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2755]
gi|404288188|ref|YP_006694774.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|405751148|ref|YP_006674614.1| glucose-inhibited division protein B [Listeria monocytogenes ATCC
19117]
gi|405756931|ref|YP_006680395.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2540]
gi|417318826|ref|ZP_12105389.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1-220]
gi|422810836|ref|ZP_16859247.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J1-208]
gi|424824552|ref|ZP_18249565.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
gi|258605190|gb|EEW17798.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|293582471|gb|EFF94503.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|293594074|gb|EFG01835.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|300515717|gb|EFK42766.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|328469139|gb|EGF40087.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1-220]
gi|332313232|gb|EGJ26327.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
gi|378751041|gb|EHY61632.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J1-208]
gi|404220348|emb|CBY71712.1| glucose-inhibited division protein B [Listeria monocytogenes ATCC
19117]
gi|404226131|emb|CBY77493.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2540]
gi|404229010|emb|CBY50415.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2755]
gi|404247117|emb|CBY05342.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 238
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|359409902|ref|ZP_09202367.1| Ribosomal RNA small subunit methyltransferase G [Clostridium sp.
DL-VIII]
gi|357168786|gb|EHI96960.1| Ribosomal RNA small subunit methyltransferase G [Clostridium sp.
DL-VIII]
Length = 239
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q E+ +Y+ L +WN K+NLTA+ D +V+++H DS+ +N + + +
Sbjct: 18 LSKQQYEKFIIYMKLLQEWNEKINLTAIVDDEDVIKKHFIDSIKAFK--RNEFKTANN-- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PGL +AI D KVTLL+S+NKR FL +S + NV +
Sbjct: 74 ------LIDVGTGAGFPGLPIAIMKEDIKVTLLDSLNKRINFLNTVISKIGISNVTTIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ RE++D+A +RAVA M +L+E CLP V++GG F+A KG +E+++S
Sbjct: 128 RAEDGARNLELRERFDIATSRAVANMSVLSELCLPYVKIGGSFIALKGPSVDQEIQDSMN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L+++C V ++ + V+ K + K YPR G K PL
Sbjct: 188 AIKILGGKLVEVCEVNIENTELKHNLVIVKKIKECAKIYPRKAGLITKNPL 238
>gi|410723296|ref|ZP_11362540.1| rRNA small subunit methyltransferase G [Clostridium sp. Maddingley
MBC34-26]
gi|410603342|gb|EKQ57777.1| rRNA small subunit methyltransferase G [Clostridium sp. Maddingley
MBC34-26]
Length = 239
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ Y+ L +WN K+NLTA+ + E++++H DS IK+ ++
Sbjct: 18 LSKEQFEKFTDYMKLLQEWNEKINLTAIIEDEEIIKKHFIDS------IKSFKRVEIKNA 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+DVGTGAG PGL +AI D KVTLL+S+NKR FL ++ L NV +
Sbjct: 72 GN----LIDVGTGAGFPGLPIAIMKEDIKVTLLDSLNKRINFLNTVITTLGLSNVTTIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D RE++DVA +RAVA M +L+E+CLP VRVGG F+A KG ++E+ S
Sbjct: 128 RAEDGARDSKLREKFDVATSRAVANMSVLSEFCLPYVRVGGSFIALKGPAVEQEINQSLN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L +C V + + VV K + PK YPR G K P+
Sbjct: 188 AIKILGGELANICEVHIEGTELRHNLVVVKKVKECPKVYPRKAGLITKNPI 238
>gi|169830195|ref|YP_001700353.1| methyltransferase gidB [Lysinibacillus sphaericus C3-41]
gi|238688171|sp|B1HPM1.1|RSMG_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168994683|gb|ACA42223.1| Methyltransferase gidB [Lysinibacillus sphaericus C3-41]
Length = 238
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q Y + L++WN KMNLTA+ D+ V +H DS+ S + + D S
Sbjct: 17 LSEKQITQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSI--------SASFYFDFS 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + + I P VT+++S+NKR FL H QL N+ V
Sbjct: 69 --KVITVCDVGAGAGFPSIPIKICFPHLHVTIVDSLNKRITFLNHLSDELQLENMNFVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+++ +REQYDV ARAVA + +L+E C+PL + GG FVA K EE+K++++
Sbjct: 127 RAEEFGQNIKYREQYDVVTARAVARLSVLSELCVPLAKQGGYFVALKAAAGAEELKDAKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L + S + R + K + TPKKYPR PG P K P+
Sbjct: 187 ALTTLGVKLKEEYSFKLPVEESDRILYIFDKIKGTPKKYPRKPGVPNKTPI 237
>gi|226315525|ref|YP_002775421.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
gi|254766884|sp|C0ZA63.1|RSMG_BREBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226098475|dbj|BAH46917.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
Length = 238
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L RQ+EQ + L++WN KMNLT + + +V +H DS I P +
Sbjct: 16 SLTDRQKEQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDS--ITPAFYFPF------ 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +VD+G GAG P + L I P K+T+++S+NKR FL+H L NV V
Sbjct: 68 --DQVQSVVDIGGGAGFPSIPLKICFPHLKMTIIDSLNKRMSFLQHVAKELGLENVNPVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ +RE++D+ VARAVA + +L+E+CLP +VGG FVA KG + E+ ++
Sbjct: 126 GRAEDRGQEAMYREKFDLVVARAVARLNLLSEFCLPFAKVGGHFVALKGAEITPELAEAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++ +G ++ + + G+R V+ K TPK YPR G PAK PL
Sbjct: 186 KAIKTLGGKTRKVETFQLLEEAGERNIVIMEKIEATPKSYPRKAGVPAKKPL 237
>gi|290891984|ref|ZP_06554981.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|404409185|ref|YP_006691900.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2376]
gi|290558578|gb|EFD92095.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|404243334|emb|CBY64734.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2376]
Length = 238
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVDEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|289579528|ref|YP_003478155.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
gi|289529241|gb|ADD03593.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
Length = 240
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 135/227 (59%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E H Y LL+WN+KMNLTA+ + +EV+ +H DSL+++ K
Sbjct: 26 EHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVK----------SGKIQGEEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL+S KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPSIPLKIVFPKLKATLLDSSKKRITFLEEVINKLDINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +EE++N+++A++ +
Sbjct: 136 KDIKYREQFDLSVARAVAPLNILLEYTLPFVKVEGYFIALKGREIEEEIENTQKALRELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ +E + P+ ++ K + P KYPR + PL
Sbjct: 196 GKIEEI--MEIRLPYSDIVHHLIIIKKVDKCPTKYPRRANAIQRSPL 240
>gi|150019905|ref|YP_001312159.1| 16S rRNA methyltransferase GidB [Clostridium beijerinckii NCIMB
8052]
gi|189039494|sp|A6M3M3.1|RSMG_CLOB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149906370|gb|ABR37203.1| methyltransferase GidB [Clostridium beijerinckii NCIMB 8052]
Length = 239
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ Y+ L +WN K+NLTA+ D E++++H DS I K S
Sbjct: 18 LSKEQYEKFIDYMKLLQEWNEKINLTAIIDDEEIIKKHFIDS---IKAFKRDEFKIASS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PGL +AI D VTLL+S+NKR FL ++ NV +
Sbjct: 74 ------LIDVGTGAGFPGLPIAIMRADLNVTLLDSLNKRVSFLNTVINRIGASNVTTIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE KD+ RE +D+A +RAVA M +L+E CLP V+VGG F+A KG +E+ S
Sbjct: 128 RAEDGAKDIKLRENFDIATSRAVANMSVLSELCLPYVKVGGSFIALKGPSVDQEIIESTN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +L++C + + + VV K R+PK YPR G +K P+
Sbjct: 188 AIKILGGKILEVCEINIEDTELKHNLVVVKKIDRSPKGYPRRAGLISKNPI 238
>gi|398814738|ref|ZP_10573416.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. BC25]
gi|398035826|gb|EJL29052.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. BC25]
Length = 238
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L RQ+EQ + L++WN KMNLT + + +V +H DS I P +
Sbjct: 16 SLTDRQKEQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDS--ITPAFYFPF------ 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +VD+G GAG P + L I P K+T+++S+NKR FL+H L NV V
Sbjct: 68 --DQVQSVVDIGGGAGFPSIPLKICFPHLKMTIIDSLNKRMSFLQHVAQELGLENVNPVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ +RE++D+ VARAVA + +L+E+CLP +VGG FVA KG + E+ ++
Sbjct: 126 GRAEDRGQEAVYREKFDLVVARAVARLNLLSEFCLPFAKVGGHFVALKGAEITPELAEAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++ +G ++ + + G+R V+ K TPK YPR G PAK PL
Sbjct: 186 KAIKTLGGKTRKVETFQLLEEAGERNIVIMEKIEATPKSYPRKAGVPAKKPL 237
>gi|224475499|ref|YP_002633105.1| 16S rRNA methyltransferase GidB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766902|sp|B9DI97.1|RSMG_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222420106|emb|CAL26920.1| glucose inhibited division protein B [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 240
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H TLN +Q++Q Y + L++WN KMNLT++ D V +H DS+ T+
Sbjct: 12 EHDITLNDKQKQQFQTYYELLVEWNEKMNLTSITDEEGVYLKHFYDSI----------TA 61
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
N L + DVG GAG P + L I P KVT+++S+NKR FL H L V
Sbjct: 62 AFYIDMNQELSICDVGAGAGFPSIPLKIVFPQLKVTIVDSLNKRIQFLNHLADALDLRGV 121
Query: 174 QIVRGRAETLGK-DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+V RAE G RE YD+ ARAVA + +L+E CLPLV+ GG F+A K +EE
Sbjct: 122 SVVHERAENFGNVRGDNRESYDIVTARAVARLSVLSELCLPLVKTGGHFIAMKSSKGEEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + + + G + + + E G+R ++ K +TPKKYPR GTP K PL
Sbjct: 182 LEEARFGIGVFGGRVEAVETFELPGDAGERQMIIIEKRSKTPKKYPRKAGTPNKSPL 238
>gi|304439123|ref|ZP_07399042.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372482|gb|EFM26069.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 234
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 13/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ + ++ Y + LL+WN MNLTA+ D E+ +H D L I T D
Sbjct: 15 FDSEKNNKLQKYKEILLEWNSFMNLTAITDDEEIDVKHFLDCLTIFK------TGELDGK 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++DVGTGAG PG+ +AI PD +VTLL+S+NKR FL V T L NV G
Sbjct: 69 KS----VIDVGTGAGFPGIPMAIKNPDLEVTLLDSLNKRIKFLNKVVEETDLKNVTTYHG 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + FR+ +DV+V+RAVA M L EY LP V+ GG+ +A KG + +EE+K +E
Sbjct: 125 RAEEFARKKEFRDAFDVSVSRAVANMATLTEYTLPYVKPGGVMIAMKGSEYKEELKEAEN 184
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + + + P G + +V K + TPKKYPR G P PL
Sbjct: 185 AIKVLGGEIKNVMEI--TLPDGILHSLIVVEKVKPTPKKYPRSGGKPKSKPL 234
>gi|163791212|ref|ZP_02185629.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
gi|159873543|gb|EDP67630.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
Length = 238
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T+ +Q +Q Y+ L +WN K+NLTA+ + EV +H DS I + ++ + S
Sbjct: 16 TVTEKQMKQFDQYLKLLQEWNEKINLTAITEKEEVYLKHFYDS--ITAGLYVNFNNGVQS 73
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + L I P +VT+++S+NKR FL +L V
Sbjct: 74 LC-------DVGAGAGFPSIPLKIIFPQLEVTIVDSLNKRIQFLTLLAKTLELDGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ FRE +D ARAVA M +LAE CLPLV+ GLF+A K + QEE+ +
Sbjct: 127 DRAETFGQNKQFRESFDFVTARAVARMSVLAELCLPLVKKDGLFIALKASNTQEEMDEGK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G + E G+R V+ K + TPKK+PR PGTP K PL
Sbjct: 187 KAIATLGGKFREEFVFELPHEAGERHIVLIDKKKETPKKFPRKPGTPNKNPL 238
>gi|297531685|ref|YP_003672960.1| methyltransferase GidB [Geobacillus sp. C56-T3]
gi|297254937|gb|ADI28383.1| methyltransferase GidB [Geobacillus sp. C56-T3]
Length = 238
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++R Q Y + L++WN KMNLTA+ D V +H DS++ P +++
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSA----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L DVG+GAG P L L I P +V++++S+ KR FLEH ++ L +V +
Sbjct: 70 ---PLALCDVGSGAGFPSLPLKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHE 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET + RE +DV ARAVA M +L E CLPLV++GG F+A K EE+K +
Sbjct: 127 RAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVKMGGTFIAMKAASAPEELKEGNK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + + G+RT + K R+TP +YPR PGTP K P+
Sbjct: 187 AISVLGGEVTAMETFTLPFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|357636833|ref|ZP_09134708.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
macacae NCTC 11558]
gi|357585287|gb|EHJ52490.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
macacae NCTC 11558]
Length = 237
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q HLY + L++WN+KMNLTA+ EV +H DSLA P+ Y
Sbjct: 17 LSHHQKQQFHLYFELLVEWNKKMNLTAITKEKEVYLKHFYDSLA---PVLTGYIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L ++D+G GAG P L + I CP K+T+++S+NKR +FL+ +L +V G
Sbjct: 69 -NEPLTILDIGAGAGFPSLPMKIICPQLKITIIDSLNKRILFLKALAEALELTDVYFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G + FR Q+D+ ARAVA +++L+E +P ++VGG +A K EE++ ++
Sbjct: 128 RAEDFGHNQHFRAQFDIVTARAVARIQVLSELTIPFLKVGGQLLALKASAASEELEAAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+ + + + S P G +R ++ K + TP +YPR G P K PL
Sbjct: 188 ALRLLFSRVSK--SYNYHLPNGDERNLIIISKKKETPNQYPRKAGIPNKKPL 237
>gi|429727430|ref|ZP_19262202.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius VPI
4330]
gi|429152588|gb|EKX95406.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius VPI
4330]
Length = 240
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
++ Y + L+ +N+ MNLT + D EV +H DS+AI K+ Y + +L
Sbjct: 26 DRFETYREILVDFNQHMNLTGITDQREVYIKHFLDSVAIF---KHGYLT-------GDLS 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG PGL IA PD K+TLL+S+NKR FL+ ++ V GRAE +G
Sbjct: 76 VIDVGTGAGFPGLPFKIANPDIKLTLLDSLNKRINFLKEVGRGIGFDDIDYVHGRAEEIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
++ +R+++D+A ARAVA + +L E C+P V++GG F+ KG + +E++ ++ A++++G
Sbjct: 136 QNKDYRQKFDIATARAVANLPVLLELCVPFVKIGGFFICLKGPNAVKELEEAQNAIKILG 195
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L++L V+ + T ++ K + TP KYPR G P+K PL
Sbjct: 196 VKLVELIEVDLPDEELKHTVLIFKKEKNTPIKYPRKAGKPSKNPL 240
>gi|58338077|ref|YP_194662.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus NCFM]
gi|227902745|ref|ZP_04020550.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
gi|81311393|sp|Q5FI43.1|RSMG_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58255394|gb|AAV43631.1| glucose inhibited division protein B [Lactobacillus acidophilus
NCFM]
gi|227869408|gb|EEJ76829.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
Length = 240
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 143/237 (60%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L+ +Q++Q LY L++ N +NLT + + NEV +H DS + P+
Sbjct: 11 SKHNFELSDKQKQQFKLYFKYLIEVNEHVNLTRITEENEVYLKHFFDS---VTPLFTFGE 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P KVT+++S+ KR FL++ + L +
Sbjct: 68 VFKDGAT-----LCDVGAGAGFPSIPLKILNPTLKVTIVDSLAKRLTFLKNLIEKLGLTD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ GG F+A KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKKGGYFIALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + ++A++++G L++ + +RT ++ K ++TPKKYPR GTP + P+
Sbjct: 183 LDDGQKALEVLGGKLVKEEELTLPHSKEERTLILVKKIKQTPKKYPRQAGTPRRKPI 239
>gi|255283804|ref|ZP_05348359.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
gi|255265687|gb|EET58892.1| 16S rRNA methyltransferase GidB [Marvinbryantia formatexigens DSM
14469]
Length = 261
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q Y + L++WN MNLTA+ + EV+++H DSL+I+ + +
Sbjct: 42 LSQKQLLQFEKYYELLIKWNSLMNLTAITEHEEVLKKHFLDSLSIVKTVDMTKIH----- 96
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PG+ L I+ P KV LL+S+ KR FL H L ++ + G
Sbjct: 97 -----TLMDVGTGAGFPGIPLKISYPHLKVVLLDSLGKRVKFLNHVTEELGLEDISAIHG 151
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE +D+ V+RAVA + L+EYC+P + LF++ K +EE+ + R
Sbjct: 152 RAEDFARQEKYRESFDLCVSRAVANLSSLSEYCIPYTKKNNLFISYKSGKVEEELDAARR 211
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV L+G + ++C + G+R VV K + TPKKYPR G PAK PL
Sbjct: 212 AVSLLGGKVEKVCRF-MLTDAGERALVVIRKEKSTPKKYPRKAGLPAKEPL 261
>gi|118444066|ref|YP_876981.1| 16S rRNA methyltransferase GidB [Clostridium novyi NT]
gi|189039496|sp|A0PX79.1|RSMG_CLONN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118134522|gb|ABK61566.1| glucose-inhibited division protein B [Clostridium novyi NT]
Length = 243
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 135/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y D L WN K+NLTA+ + E++++H DS+ I + Y +
Sbjct: 22 FNDKKYNQFIQYKDLLKDWNGKVNLTAITEDEEIIKKHFIDSMKIF---QFEYLRKAN-- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTG G PG+ + I PD + LL+S+ KR L+ ++ + +V+ + G
Sbjct: 77 -----KIIDIGTGGGFPGIPMKIMRPDADIVLLDSLKKRINVLDDILNKIGINDVETIHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K+ +RE++D V+RAVA + L+E+CLP V+VGG FVA KG EEVK +++
Sbjct: 132 RAEEFAKNPKYREKFDAVVSRAVANLASLSEFCLPYVKVGGYFVALKGPAVDEEVKIAKK 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ VE + + V+ K + TPK+YPR PGT K PL
Sbjct: 192 AISILGGKLEEIREVEIEDSDLKHNLVIIKKIKNTPKQYPRKPGTATKKPL 242
>gi|297545650|ref|YP_003677952.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843425|gb|ADH61941.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 240
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 135/227 (59%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E H Y LL+WN+KMNLTA+ + +EV+ +H DSL+++ K
Sbjct: 26 EHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVK----------SGKIKGEEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL+S KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPSIPLKIVFPKLKATLLDSSKKRITFLEEVINKLDINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +EE++N+++A++ +
Sbjct: 136 KDIKYREQFDLSVARAVAPLNILLEYTLPFVKVEGYFIALKGREIEEEIENTQKALRELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ +E + P+ ++ K + P KYPR + PL
Sbjct: 196 GKIEEV--MEIRLPYSDIVHHLIIIKKVDKCPTKYPRRANAIQRSPL 240
>gi|303272167|ref|XP_003055445.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463419|gb|EEH60697.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 136/214 (63%), Gaps = 5/214 (2%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL-KLVDVGTGAGLPGLVL 139
MNLT V+EV+ RH+ DSLA+IPPI+ + S SS S+ +++DVG+GAG PG+ L
Sbjct: 1 MNLTGATTVDEVLSRHVADSLALIPPIEAALASSTTSSSPSHTPRILDVGSGAGFPGVAL 60
Query: 140 AIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FREQYDVAVA 198
AIA P W+VTLL+++ KR FL+ A NV+ + RAE GK S RE YD+ A
Sbjct: 61 AIARPRWEVTLLDTLQKRVAFLDAAAEECGATNVKTLWSRAEDAGKVGSEHREAYDIVTA 120
Query: 199 RAVAEMRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKNSERAVQLMGASLLQLCSVESQ 256
RAVAE+R LAE C+PLVRVGG +VAAK E + AV+L+G + L V+S+
Sbjct: 121 RAVAELRTLAELCVPLVRVGGSWVAAKNSTTSTAAETAAAAAAVELLGGAPLVAVEVQSE 180
Query: 257 SPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
P G+ RTAVV K+R TP KYPR G K PL
Sbjct: 181 GPDGEMRTAVVSAKARETPGKYPRRAGLANKRPL 214
>gi|366089667|ref|ZP_09456033.1| 16S rRNA methyltransferase GidB [Lactobacillus acidipiscis KCTC
13900]
Length = 242
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 130/232 (56%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +QQEQ Y + L+ WN+K+NLTA+ D +V +H DSL IP Y S
Sbjct: 17 LTPQQQEQFATYFNLLVDWNQKVNLTAITDEEDVYLKHFYDSL--IPAF---YLSELREQ 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L DVG GAG P L L I P K+T+++S+NKR FLE V L +V +
Sbjct: 72 P---IALCDVGAGAGFPSLPLKILFPSLKITIVDSLNKRIKFLEELVKKLGLNDVTLEHA 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G + RE +D+ ARAVA + +L+E CLPL +VGG FVA K EE+K ++
Sbjct: 129 RAEDFGARKSQARESFDIVTARAVANLPVLSELCLPLTKVGGKFVALKAQKASEEIKRAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A Q++G L + + + QR VV K + TPKKYPR GTP K PL
Sbjct: 189 YAFQMLGGRLQEDIATKLPEVDEQRHIVVITKEKATPKKYPRKAGTPGKEPL 240
>gi|47093263|ref|ZP_00231034.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|417314004|ref|ZP_12100710.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1816]
gi|47018337|gb|EAL09099.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|328468275|gb|EGF39281.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J1816]
Length = 238
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + +T D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSIS--AAVYVDFTK-FDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFSFFLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|399517305|ref|ZP_10758858.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Leuconostoc pseudomesenteroides 4882]
gi|398647803|emb|CCJ66885.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Leuconostoc pseudomesenteroides 4882]
Length = 239
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 136/233 (58%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ Q Q Y + L+ N +NLTA+ + +EV +H DSL + + S
Sbjct: 16 TLSDAQLAQFEQYYELLVTTNASVNLTAITEKSEVYLKHFYDSLTV--------AFYEKS 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+D+GTGAG P + L IA P+ K+TL++++ KR FL+ V +L +V IV
Sbjct: 68 LQDGEHSLIDIGTGAGFPAIPLKIAFPNLKITLVDALQKRVKFLQTVVDELKLSDVTIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++ +FREQ+D A ARAVA +LAEY LP V +GG F+ KG Q+E+ + +
Sbjct: 128 GRAEDIGQNPTFREQFDYATARAVARTSVLAEYTLPFVHIGGEFLVMKGAAAQQELADGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+Q +G L + E P G R + K +TPKKYPR GTP+K P+
Sbjct: 188 KALQTLGGKLRDEYAFE--LPNGDSRFIQIVDKVTKTPKKYPRQAGTPSKKPI 238
>gi|335039031|ref|ZP_08532219.1| Ribosomal RNA small subunit methyltransferase G [Caldalkalibacillus
thermarum TA2.A1]
gi|334181068|gb|EGL83645.1| Ribosomal RNA small subunit methyltransferase G [Caldalkalibacillus
thermarum TA2.A1]
Length = 238
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ Q +Q Y L WN+KMNLTA+ + EV +H DSL + ++ +
Sbjct: 16 TLSPAQLDQFEQYYRLLADWNQKMNLTALTEREEVYLKHFYDSLTV------AFYYNFRE 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N LVDVG GAG P L L I P +VT+++S+ KR FLEH V L +V++
Sbjct: 70 PVN----LVDVGAGAGFPSLPLKICFPHVQVTIVDSLKKRITFLEHLVQALNLDHVRLYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+ REQYD+ +ARAVA + +L+E CLPL +V G F+A KG +EE++ ++
Sbjct: 126 DRAEHFGQLPEHREQYDLVLARAVARLNVLSELCLPLAKVKGTFIAMKGAKGKEELQEAQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + L + G+R ++ K R TP KYPR PG PAK PL
Sbjct: 186 GAIPKLGGEIKDLHQLYLPGDEGERQLIILHKVRPTPGKYPRQPGLPAKKPL 237
>gi|291561654|emb|CBL40453.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SS3/4]
Length = 248
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 134/234 (57%), Gaps = 9/234 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAII---PPIKNSYTSHC 115
L+ +Q+EQ Y + L++ N+ MNLTA+ ++++V+++H DSL ++ P + +
Sbjct: 20 LSKQQKEQFFKYYEMLIEKNKVMNLTAITELSDVIKKHFVDSLLLVLAAPELGLKLDTSA 79
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
C +DVGTGAG PG+ L IA P K+TLL+S+NKR FL + L ++
Sbjct: 80 KYRC------IDVGTGAGFPGIPLKIAFPGLKITLLDSLNKRVGFLNEVIETLGLTDINA 133
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE G+D +REQYD+ V+RAVA M L+EYC+P V+ GG F+ K EE+
Sbjct: 134 VHGRAEDYGRDPKYREQYDLCVSRAVANMSTLSEYCIPFVKKGGYFIPYKSGKADEEIAQ 193
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ AV+ +G ++ + +RT V K T K+YPR G P K PL
Sbjct: 194 ARSAVKKLGGAMQDIIVKFLPETDVERTFVPVKKLAATAKQYPRKAGLPGKEPL 247
>gi|42519771|ref|NP_965701.1| 16S rRNA methyltransferase GidB [Lactobacillus johnsonii NCC 533]
gi|268320135|ref|YP_003293791.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
gi|55976462|sp|Q74HM3.1|RSMG_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41584061|gb|AAS09667.1| glucose inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|262398510|emb|CAX67524.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
Length = 239
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 134/234 (57%), Gaps = 9/234 (3%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE LN +Q++Q Y D L+++N+K+NLT + D NEV +H DS+ + + +
Sbjct: 15 FE-LNEKQKKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSITPLLEFPDLFKGEK 73
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
L DVG GAG P L + I CP+ +T+++S+ KR FL+ V+ L V +
Sbjct: 74 --------TLCDVGAGAGFPSLPIKILCPNLSITIVDSLGKRLKFLDELVNDLGLDKVTL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V RAE G++ RE++D+ RAVA M +L+EYCLPL +VGG VA KG Q+E+
Sbjct: 126 VHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPLAKVGGYLVALKGPKAQDELAE 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++G + + + RT +V K + TPKKYPR GTP K PL
Sbjct: 186 AKHAIDVLGGKVEDVKELTLPDTDDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|365155929|ref|ZP_09352271.1| ribosomal RNA small subunit methyltransferase G [Bacillus smithii
7_3_47FAA]
gi|363627854|gb|EHL78698.1| ribosomal RNA small subunit methyltransferase G [Bacillus smithii
7_3_47FAA]
Length = 238
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L + Q EQ Y + L+ WN +MNLTA+ D EV +H DS+ S + D
Sbjct: 17 LTSFQLEQFERYYEMLVDWNERMNLTAITDREEVYLKHFYDSI--------SAAFYFD-- 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L DVG GAG P + L I P K+T+++S+ KR FLE +L N
Sbjct: 67 FRKEWSLCDVGAGAGFPSIPLKIVFPSLKITIVDSLKKRITFLEELAKTLKLENTSFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE+ G+ RE YDV ARAVA M +L+E CLPLV+ G F+A K QEE++ +E+
Sbjct: 127 RAESFGQKKEHREHYDVVTARAVARMSVLSELCLPLVKENGAFLAMKAAHAQEELRAAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + ++ S +R + K ++TPKKYPR PG P K+PL
Sbjct: 187 AISTLGGKIKEIGSFLLPYEQSERNIIWIEKVKQTPKKYPRKPGVPNKMPL 237
>gi|238917973|ref|YP_002931490.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
gi|238873333|gb|ACR73043.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
Length = 240
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 131/232 (56%), Gaps = 10/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI-IPPIKNSYTSHCDS 117
L RQ EQ +Y L++WN MNLT + D +EV+ +H DSL + I I +
Sbjct: 17 LTDRQYEQFDMYYKLLVEWNSFMNLTGITDYDEVLLKHYVDSLVLDIEKIGHG------- 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+DVGTGAG PGL L IA P V LL+S+NKR FL + L ++ V
Sbjct: 70 --KKEISLIDVGTGAGFPGLPLKIAYPQLNVVLLDSLNKRVKFLNQVIEDLGLTGIETVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G++ RE +DV+V+RAVA + L EY LP V+VGG FVA K D EE+ N++
Sbjct: 128 SRAEDGGRNKDLREHFDVSVSRAVANLATLVEYNLPFVKVGGYFVAYKSGDIDEELVNAK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+AV ++G ++ ++ + R+ V K + T K+PR G P+K P+
Sbjct: 188 KAVSVLGGTIEEVKKFQLPGTDIDRSLVYIKKVKPTSGKFPRKAGLPSKEPV 239
>gi|289436054|ref|YP_003465926.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289172298|emb|CBH28844.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 238
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ Q +Q H Y + L++WN KMNLTA+ + EV +H DS++ + N + S CD
Sbjct: 17 LSEAQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD- 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
VG GAG P + + I P +V++++S+ KR FL+ L NV
Sbjct: 76 ----------VGAGAGFPSIPIKICFPHLEVSIVDSLKKRMTFLDALAEKLALTNVHFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ + RE+YD+ ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E
Sbjct: 126 DRAETFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ S +R V K++ TP KYPR PGTP K+P+
Sbjct: 186 KAIKVLGGKVVNHFSFSLPIEESERNIYVIAKTKETPNKYPRKPGTPNKLPI 237
>gi|288554599|ref|YP_003426534.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
gi|288545759|gb|ADC49642.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
Length = 237
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y + L++WN KMNLTA+ +V +H DS+ ++ S
Sbjct: 17 LSEKQLQQFERYFNILVEWNEKMNLTALTSEEDVYIKHFYDSI----------SASFFYS 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ K++DVG GAG P + L I P+ V++++S+ KR FLEH S +L V
Sbjct: 67 FEAGQKIIDVGAGAGFPSIPLKILYPEIHVSIVDSLKKRIGFLEHLASELELDGVAFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + REQYD+ ARAVA M +LAE CLPLV+VGG F+A KG + E+ +++
Sbjct: 127 RAETFGQNPAHREQYDIVTARAVARMSVLAELCLPLVKVGGEFIAMKGAGAEGELTDAKN 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +GA + + + +R ++ K + T KKYPR PGTP K PL
Sbjct: 187 ALIQLGAKVKDDHTFKLPIEESERHIMIIEKQKATKKKYPRKPGTPNKQPL 237
>gi|392956545|ref|ZP_10322072.1| 16S rRNA methyltransferase GidB [Bacillus macauensis ZFHKF-1]
gi|391877527|gb|EIT86120.1| 16S rRNA methyltransferase GidB [Bacillus macauensis ZFHKF-1]
Length = 237
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++ Q +Q Y L++WN KMNLTA+ + EV +H DS+ S + D +
Sbjct: 17 LSSVQLQQFEDYFHLLVEWNEKMNLTAITNQEEVYLKHFYDSV--------SAAFYFDFT 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L + DVG GAG P + L I P K+++ +S+ KR FL+H L +V +
Sbjct: 69 --QDLSICDVGAGAGFPSIPLKICFPHVKLSICDSLQKRITFLQHLTDQLGLRDVTLHHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET K RE YD+ +ARAVA M +L+E CLPLV+ GG F+A KG +E+K+SE+
Sbjct: 127 RAETFAKRPEIRETYDLVMARAVARMSVLSELCLPLVKKGGHFLAMKGSQLPDEMKDSEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G + ++ S + R V+ K + TPKKYPR PGTP K PL
Sbjct: 187 AISLLGGKVKEVHSFKLPEENSDRHIVLLSKEKPTPKKYPRKPGTPNKTPL 237
>gi|448239764|ref|YP_007403822.1| ribosomal RNA small subunit methyltransferase [Geobacillus sp.
GHH01]
gi|445208606|gb|AGE24071.1| ribosomal RNA small subunit methyltransferase [Geobacillus sp.
GHH01]
Length = 238
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++R Q Y + L++WN KMNLTA+ D V +H DS+ S + D S
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSV--------SPAFYYDFS 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L L DVG+GAG P L L I P +V++++S+ KR FLEH ++ L +V +
Sbjct: 69 --APLALCDVGSGAGFPSLPLKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHE 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET + RE +DV ARAVA M +L E CLPLV++GG F+A K EE+K +
Sbjct: 127 RAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVKMGGTFIAMKAASAPEELKEGNK 186
Query: 239 AVQLMGASLLQLCSVESQS-PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E+ + PF G+RT + K R+TP +YPR PGTP K P+
Sbjct: 187 AISVLGG---EVTATETFTLPFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|424780797|ref|ZP_18207667.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Catellicoccus marimammalium M35/04/3]
gi|422842722|gb|EKU27171.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Catellicoccus marimammalium M35/04/3]
Length = 238
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 136/238 (57%), Gaps = 13/238 (5%)
Query: 54 SHFET-LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSY 111
H++ L +Q+EQ Y + L++WN+KMNLTA+ + NEV +H DSL++I
Sbjct: 12 DHYQVELTEKQKEQFAKYYEILVEWNQKMNLTAITEKNEVYLKHFLDSLSLISATNWEEV 71
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
T+ CD VG GAG P L L I P K+T+++S+NKR FL H L
Sbjct: 72 TTVCD-----------VGAGAGFPSLPLKIVFPHLKITIVDSLNKRIQFLNHLCQELGLD 120
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
V RAET G++ FREQ+DV ARAVA + ILAE C+PLV+ GLF+A K +E
Sbjct: 121 GVCCYHDRAETFGQNPEFREQFDVVTARAVARLNILAELCVPLVKKDGLFIALKASKGRE 180
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E+ +++A++ +G + +++ + R + K + TPKKYPR PG P K PL
Sbjct: 181 ELAEAKKALEALGITSVEVETFALPICDDPRQLFIMKKGKLTPKKYPRKPGLPNKKPL 238
>gi|339496800|ref|ZP_08657776.1| 16S rRNA methyltransferase GidB [Leuconostoc pseudomesenteroides
KCTC 3652]
Length = 239
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q Q Y + L+ N +NLTA+ + +EV +H DSL + Y +
Sbjct: 16 TLTDAQLAQFEQYYELLVTTNASVNLTAITEKSEVYLKHFYDSLTVA-----FYEKNLQD 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+S L+D+GTGAG P + L IA P+ K+TL++++ KR FL+ V +L +V IV
Sbjct: 71 GEHS---LIDIGTGAGFPAIPLKIAFPNLKITLVDALQKRVKFLQTVVDELKLSDVTIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++ +FREQ+D A ARAVA +LAEY LP V +GG F+ KG Q+E+ + +
Sbjct: 128 GRAEDIGQNPTFREQFDYATARAVARTSVLAEYTLPFVHIGGEFLVMKGAAAQQELADGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+Q +G L + E P G R + K +TPKKYPR GTP+K P+
Sbjct: 188 KALQTLGGKLRDEYAFE--LPNGDSRFIQIVDKVTKTPKKYPRQAGTPSKKPI 238
>gi|386054989|ref|YP_005972547.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes Finland
1998]
gi|346647640|gb|AEO40265.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes Finland
1998]
Length = 238
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + +S
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFESI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVYFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVKEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|417838259|ref|ZP_12484497.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus johnsonii pf01]
gi|338761802|gb|EGP13071.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus johnsonii pf01]
Length = 239
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 134/234 (57%), Gaps = 9/234 (3%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE LN +Q++Q Y D L+++N+K+NLT + D NEV +H DS+ + + +
Sbjct: 15 FE-LNEKQKKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSITPLLEFPDLFKGEK 73
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
L DVG GAG P L + I CP+ +T+++S+ KR FL+ V+ L V +
Sbjct: 74 --------TLCDVGAGAGFPSLPIKILCPNLSITIVDSLGKRLKFLDELVNDLGLDKVTL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V RAE G++ RE++D+ RAVA M +L+EYCLPL +VGG VA KG Q+E+
Sbjct: 126 VHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPLAKVGGYLVALKGPKAQDELAE 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++G + + + RT +V K + TPKKYPR GTP K PL
Sbjct: 186 AKHAIDVLGGKVEDVKELPLPDTDDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|449980723|ref|ZP_21817365.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 5SM3]
gi|449176511|gb|EMB78853.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 5SM3]
Length = 237
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L N
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDN 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G +R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDRRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|226225352|ref|YP_002759459.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|386733502|ref|YP_006206998.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 07PF0776]
gi|406705542|ref|YP_006755896.1| glucose-inhibited division protein B [Listeria monocytogenes L312]
gi|259495498|sp|C1L0D6.1|RSMG_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225877814|emb|CAS06529.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|384392260|gb|AFH81330.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 07PF0776]
gi|406362572|emb|CBY68845.1| glucose-inhibited division protein B [Listeria monocytogenes L312]
Length = 238
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFAFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|239828705|ref|YP_002951329.1| 16S rRNA methyltransferase GidB [Geobacillus sp. WCH70]
gi|259495497|sp|C5D9Y5.1|RSMG_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|239808998|gb|ACS26063.1| methyltransferase GidB [Geobacillus sp. WCH70]
Length = 238
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++ Q Y + L++WN KMNLTA+ D V +H DSL+ P ++
Sbjct: 16 SLSSQALAQFERYYELLMEWNEKMNLTAITDKPSVYLKHFFDSLS--PAFYYDFSQ---- 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+L + DVG GAG P + L I P K+++++S+ KR FLEH + L +V
Sbjct: 70 ----SLSICDVGAGAGFPSVPLKICFPHLKLSIVDSLQKRITFLEHLAAELGLTDVAFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ FRE +D+ ARAVA M +L+E CLPLV+V G F+A K QEE++ +
Sbjct: 126 DRAETFGRKKEFRESFDIVTARAVARMSVLSELCLPLVKVNGTFIAMKAASAQEELEQGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G + + +RT + K R TP KYPR PG P K P+
Sbjct: 186 KAIDVLGGEISAIERFMLPIEQSERTIIFIQKVRNTPNKYPRKPGMPNKQPI 237
>gi|134301151|ref|YP_001114647.1| methyltransferase GidB [Desulfotomaculum reducens MI-1]
gi|189039383|sp|A4J9R9.1|RSMG_DESRM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134053851|gb|ABO51822.1| 16S rRNA m(7)G-527 methyltransferase [Desulfotomaculum reducens
MI-1]
Length = 240
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 143/248 (57%), Gaps = 15/248 (6%)
Query: 44 TLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI 103
T+T + F+ L Q Y + L++WN+ +NLTA+ + EV +H DSL
Sbjct: 5 TITLKQAAKEMEFD-LTENQTLAFEKYYNLLIEWNKNINLTAIIEPKEVALKHFIDSLTC 63
Query: 104 IPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEH 163
+ + + C +N+ +D+GTGAG PG+ + I PD VTL++S+NKR FL
Sbjct: 64 LKIL--------EIPCQANV--LDIGTGAGFPGIPIKIFRPDINVTLMDSLNKRVNFLNE 113
Query: 164 AVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVA 223
+ L N+ + RAE G+ RE+YD ++RAVA++++L+EYCLP ++ G F++
Sbjct: 114 VIKKLGLTNICAIHDRAEDFGQKKEHREKYDYVLSRAVAKLKVLSEYCLPCTKLDGYFIS 173
Query: 224 AKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPF--GQRTAVVCLKSRRTPKKYPRDP 281
KG D EEVK + +A++++G SLL + + Q PF R+ VV K ++TP YPR
Sbjct: 174 QKGPDIDEEVKEASKAIEVLGGSLLNIHKL--QLPFINDGRSLVVIKKVKQTPSVYPRKA 231
Query: 282 GTPAKVPL 289
G PAK P+
Sbjct: 232 GIPAKKPI 239
>gi|414154099|ref|ZP_11410419.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454284|emb|CCO08323.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 240
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 133/222 (59%), Gaps = 14/222 (6%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCN--SNLKLVD 127
Y LL+ N+K NLTA+ + EV +H DSL C ++ N +L+D
Sbjct: 30 YYQCLLEGNQKFNLTAITEPLEVAVKHFIDSLT------------CLTAVNFPQAARLLD 77
Query: 128 VGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187
VGTGAG PGL + I PD VTL++S+NKR VFL+ ++ L N+Q V RAE G+
Sbjct: 78 VGTGAGFPGLPIKIYRPDLNVTLMDSLNKRIVFLKETLNTLGLSNIQAVHDRAEDFGRRP 137
Query: 188 SFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 247
+ RE YD+ V+RAVA + +LAEYCLP V+ GG F++ KG D ++EV+ + RA++++G L
Sbjct: 138 ADRENYDIVVSRAVARLAVLAEYCLPCVKPGGYFISQKGPDIEQEVQEAARAIKILGGQL 197
Query: 248 LQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ ++ R+ VV K + TP YPR G PAK P+
Sbjct: 198 TEVKKIQLPLIGDGRSLVVIKKIQPTPATYPRKAGLPAKKPI 239
>gi|167748065|ref|ZP_02420192.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
gi|167652057|gb|EDR96186.1| 16S rRNA methyltransferase GidB [Anaerostipes caccae DSM 14662]
Length = 236
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 134/232 (57%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L RQ Q +Y + L + N+ MNLTA+ + +V+ +H DSLA++ + C
Sbjct: 14 ALTDRQLAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALV-------KAECGF 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S K++DVGTGAG PG+ L IA P K+ LL+S+NKR FL+ + +L ++ V
Sbjct: 67 SSQ---KILDVGTGAGFPGIPLKIAFPGLKIVLLDSLNKRVKFLQEVIDALELHDITAVH 123
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + +REQ+D+ V+RAVA + L+EYCLP V+V G+F+ K +EE++ +
Sbjct: 124 GRAEDYARQKEYREQFDLVVSRAVANLSTLSEYCLPYVKVSGMFLPYKSGRIEEEMREGK 183
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV L+G + + S +RT + K + PK+YPR G P+K P+
Sbjct: 184 HAVHLLGGEIEDVVSFVLPGTDMERTILKIKKQKAAPKRYPRKAGLPSKEPI 235
>gi|56422027|ref|YP_149345.1| 16S rRNA methyltransferase GidB [Geobacillus kaustophilus HTA426]
gi|375010676|ref|YP_004984309.1| ribosomal RNA small subunit methyltransferase G [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|81557669|sp|Q5KU59.1|RSMG_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56381869|dbj|BAD77777.1| glucose-inhibited division protein [Geobacillus kaustophilus
HTA426]
gi|359289525|gb|AEV21209.1| Ribosomal RNA small subunit methyltransferase G [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 238
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++R Q Y + L++WN KMNLTA+ D V +H DS++ P +++
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSA----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L DVG+GAG P L L I P +V++++S+ KR FLEH ++ L +V +
Sbjct: 70 ---PLALCDVGSGAGFPSLPLKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHE 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET + RE +DV ARAVA M +L E CLPLV++GG F+A K EE+K +
Sbjct: 127 RAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVKMGGTFIAMKAASALEELKEGNK 186
Query: 239 AVQLMGASLLQLCSVESQS-PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E+ + PF G+RT + K R+TP +YPR PGTP K P+
Sbjct: 187 AISVLGG---EVTATETFTLPFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|399048545|ref|ZP_10740030.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. CF112]
gi|398053607|gb|EJL45781.1| 16S rRNA methyltransferase GidB [Brevibacillus sp. CF112]
Length = 238
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 132/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L RQ+EQ + L++WN KMNLT + + +V +H DS I P +
Sbjct: 16 SLTDRQKEQFDQFFRLLVEWNEKMNLTGITEEGQVYIKHFYDS--ITPAFYFPF------ 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +VD+G GAG P + L I P K+T+++S+NKR FL+H S L +V V
Sbjct: 68 --DQVKSVVDIGGGAGFPSIPLKICFPHLKMTIIDSLNKRMSFLQHVASELGLADVHPVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ +REQ+D+ VARAVA + +LAE+CLP + G F+A KG D E+ ++
Sbjct: 126 GRAEDRGQEAGYREQFDLVVARAVARLNLLAEFCLPFAQPKGHFIALKGADITTELNEAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++ +G ++ + + G+R V+ K TPK YPR G PAK PL
Sbjct: 186 KAIKTLGGKTRKVETFQLLEDAGERNIVIIEKIEATPKNYPRKAGVPAKKPL 237
>gi|260103056|ref|ZP_05753293.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
gi|260083146|gb|EEW67266.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
Length = 240
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 138/237 (58%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q+EQ LY L++ N +NLT + + NEV +H DS+ + + +
Sbjct: 11 SKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFK 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
L DVG GAG P + L I P KVT+++S+ KR FL+ ++ L N
Sbjct: 71 DGA--------TLCDVGAGAGFPSIPLKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA+M +L+EYCLPLV+ G FVA KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKKDGYFVALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++A+ ++G L++ + +RT V+ K + TPKKYPR GTP + P+
Sbjct: 183 LDEGKKALAVLGGKLIKDEELTLPGTTEERTLVLVKKVKETPKKYPRQAGTPRRKPI 239
>gi|403515812|ref|YP_006656632.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus R0052]
gi|403081250|gb|AFR22828.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus R0052]
Length = 240
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 138/237 (58%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q+EQ LY L++ N +NLT + + NEV +H DS+ + + +
Sbjct: 11 SKHNFILTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFK 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
L DVG GAG P + L I P KVT+++S+ KR FL+ ++ L N
Sbjct: 71 DGA--------TLCDVGAGAGFPSIPLKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA+M +L+EYCLPLV+ G FVA KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKKDGYFVALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++A+ ++G L++ + +RT V+ K + TPKKYPR GTP + P+
Sbjct: 183 LDEGKKALAVLGGKLIKDEELTLPGTTEERTLVLVKKVKETPKKYPRQAGTPRRKPI 239
>gi|226326136|ref|ZP_03801654.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
gi|225205678|gb|EEG88032.1| 16S rRNA methyltransferase GidB [Coprococcus comes ATCC 27758]
Length = 238
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q Q Y + L++WN+ MNLT + + EV E+H DSLA++ + S
Sbjct: 15 TLTQTQFNQFDKYYEMLVEWNKVMNLTGITEYEEVNEKHFVDSLALVKALDISKVQ---- 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PG+ L IA P K+TLL+S+NKR FL+ + L ++ +
Sbjct: 71 ------TVIDIGTGAGFPGIPLKIAFPHLKITLLDSLNKRIRFLDSVIEELNLTDIHTIH 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + +REQ+D+ V+RAVA + L+EYCLP V+VGG FV+ K D +E+ ++
Sbjct: 125 GRAEDFARQADYREQFDLCVSRAVANLSTLSEYCLPYVKVGGFFVSYKSGDIVDELSAAK 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + Q V Q P R+ V K + T KK+PR G P+K P+
Sbjct: 185 TAVHVLGGT--QNKPVVFQLPGSDISRSFVKIKKIKPTGKKFPRKAGLPSKEPI 236
>gi|300857409|ref|YP_003782393.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
gi|300437524|gb|ADK17291.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
Length = 237
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 136/231 (58%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+ ++ + Y D L WN K+NLT + + +++++H D + I ++ D S
Sbjct: 18 FDEKKYSKFIKYKDILKFWNNKINLTTIVEDEDIIKKHFIDCVKIF-----KFSPLRDIS 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++D+GTGAG PG+ + I P KV LL+S+NKR FL +S +L +++ + G
Sbjct: 73 -----NVIDIGTGAGFPGIPMKIVNPQIKVVLLDSLNKRINFLNQVISDIELNDIKCIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE KD+ +RE++D AV+RAVA + +L+E+C+P +++GG FVA KG ++E+K S++
Sbjct: 128 RAEDFSKDIEYREKFDAAVSRAVANLTVLSEFCIPYIKLGGYFVAMKGPSVEDEIKESKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV ++G + + +E+ VV K RRTP YPR G +K PL
Sbjct: 188 AVSILGGKIEDIIKIENDDL--NHNLVVIKKIRRTPNMYPRKAGIVSKKPL 236
>gi|449918817|ref|ZP_21797558.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1SM1]
gi|449159963|gb|EMB63257.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1SM1]
Length = 237
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H+ L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 TKHYINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G +R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDRRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|261420900|ref|YP_003254582.1| 16S rRNA methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|319768571|ref|YP_004134072.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
gi|261377357|gb|ACX80100.1| methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|317113437|gb|ADU95929.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
Length = 238
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++R Q Y + L++WN KMNLTA+ D V +H DS++ P +++
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKLGVYVKHFFDSVS--PAFYYDFSA----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L DVG+GAG P L L I P +V++++S+ KR FLEH ++ L +V +
Sbjct: 70 ---PLALCDVGSGAGFPSLPLKICFPHLRVSIVDSLQKRIRFLEHLITELGLADVALYHE 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET + RE +DV ARAVA M +L E CLPLV++GG F+A K EE+K +
Sbjct: 127 RAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVKMGGTFIAMKAASAPEELKEGNK 186
Query: 239 AVQLMGASLLQLCSVESQS-PF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E+ + PF G+RT + K R+TP +YPR PGTP K P+
Sbjct: 187 AISVLGG---EVTATETFTLPFDEGERTIIFIQKMRKTPNQYPRKPGTPNKQPI 237
>gi|312112750|ref|YP_003991066.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|336237216|ref|YP_004589832.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|423721709|ref|ZP_17695891.1| 16S rRNA methyltransferase gidB [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217851|gb|ADP76455.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|335364071|gb|AEH49751.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|383365512|gb|EID42808.1| 16S rRNA methyltransferase gidB [Geobacillus thermoglucosidans
TNO-09.020]
Length = 238
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+++ Q Y + L++WN KMNLTA+ D V +H DSL+ P ++
Sbjct: 17 LSSQALAQFERYYELLIEWNEKMNLTAITDKPSVYLKHFFDSLS--PAFYYDFSQ----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L L DVG GAG P + L I P K+++++S+ KR FLEH + L +V+
Sbjct: 70 ---SLSLCDVGAGAGFPSIPLKICFPHLKLSVVDSLQKRIHFLEHLAAELGLADVEFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ FRE +DV +ARAVA M +L+E CLPLV+V G F+A K QEE++ ++
Sbjct: 127 RAETFGRNKEFRESFDVVIARAVARMPVLSELCLPLVKVNGTFIAMKAASAQEELEQGKK 186
Query: 239 AVQLMGASLLQLCSVESQS-PFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ +VE + P Q RT + K + TP KYPR PG P K P+
Sbjct: 187 AIHVLGG---EVSAVERFTLPLEQSERTIIFIRKVQSTPNKYPRKPGMPNKQPI 237
>gi|385814565|ref|YP_005850958.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|385814608|ref|YP_005851001.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467284|gb|ADX70971.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467327|gb|ADX71014.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
Length = 240
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 138/237 (58%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q+EQ LY L++ N +NLT + + NEV +H DS+ + + +
Sbjct: 11 SKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFK 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
L DVG GAG P + L I P KVT+++S+ KR FL+ ++ L N
Sbjct: 71 DGA--------TLCDVGAGAGFPSIPLKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARA+A+M +L+EYCLPLV+ G FVA KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDIVTARAIAKMSVLSEYCLPLVKKDGYFVALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++A+ ++G L++ + +RT V+ K + TPKKYPR GTP + P+
Sbjct: 183 LDEGKKALAVLGGKLIKDEELTLPGTTEERTLVLVKKVKETPKKYPRQAGTPRRKPI 239
>gi|450000391|ref|ZP_21825107.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N29]
gi|449185770|gb|EMB87640.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N29]
Length = 237
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H+ L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHYINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G +R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDRRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|423101182|ref|ZP_17088886.1| 16S rRNA methyltransferase GidB [Listeria innocua ATCC 33091]
gi|370792297|gb|EHN60174.1| 16S rRNA methyltransferase GidB [Listeria innocua ATCC 33091]
Length = 238
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L+ WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDDQMKQFHDYFEMLVDWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFAFALPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|16801993|ref|NP_472261.1| 16S rRNA methyltransferase GidB [Listeria innocua Clip11262]
gi|20177891|sp|Q926V6.1|RSMG_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16415475|emb|CAC98159.1| GidB protein [Listeria innocua Clip11262]
Length = 238
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDDQMKQFHDYFKMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFAFALPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|168187285|ref|ZP_02621920.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
gi|169294773|gb|EDS76906.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
Length = 243
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ +Q Y D L WN K+NLTA+ + E++++H DS+ I + Y +
Sbjct: 22 FNDKKYDQFIQYKDLLKDWNEKVNLTAITEDEEIIKKHFIDSMKIF---QFEYLRKAN-- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTG G PG+ + I PD + LL+S+ KR L+ ++ + +V+ + G
Sbjct: 77 -----KIIDIGTGGGFPGIPIKIMRPDVNMVLLDSLKKRINVLDDILTNIGINDVESIHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K+ +RE++D V+RAVA + L+E+CLP V+VGG FVA KG +EVK +++
Sbjct: 132 RAEEFAKNPKYREKFDAVVSRAVANLASLSEFCLPYVKVGGYFVALKGPAVDDEVKIAKK 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ VE + + V+ K + TPK+YPR PGT K PL
Sbjct: 192 AISILGGKLEEIREVEIEDSDLKHNLVIIKKIKNTPKQYPRKPGTATKKPL 242
>gi|126651988|ref|ZP_01724180.1| glucose-inhibited division protein B [Bacillus sp. B14905]
gi|126591257|gb|EAZ85366.1| glucose-inhibited division protein B [Bacillus sp. B14905]
Length = 238
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q Y + L++WN KMNLTA+ D+ V +H DS+ S + + D S
Sbjct: 17 LSEKQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSI--------SASFYFDFS 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + + I P VT+++S+NKR FL H QL N+ V
Sbjct: 69 --KVITVCDVGAGAGFPSIPIKICFPHLHVTIVDSLNKRITFLNHLSDELQLENMNFVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+++ +REQYDV ARAVA + +L+E C+PL + G FVA K EE+K++++
Sbjct: 127 RAEEFGQNLKYREQYDVVTARAVARLSVLSELCVPLAKQDGYFVALKAAAGAEELKDAKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L + S + RT + K + TPKKYPR PG P K P+
Sbjct: 187 ALTTLGVKLKEEYSFKLPVEESDRTLYIFDKIKGTPKKYPRKPGVPNKTPI 237
>gi|449892271|ref|ZP_21788371.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF12]
gi|449959005|ref|ZP_21810013.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4VF1]
gi|450006895|ref|ZP_21827449.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NMT4863]
gi|450046701|ref|ZP_21839084.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N34]
gi|450068173|ref|ZP_21847019.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML9]
gi|450121559|ref|ZP_21866365.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST6]
gi|450133226|ref|ZP_21870506.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML8]
gi|450137535|ref|ZP_21871713.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML1]
gi|450161434|ref|ZP_21880506.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 66-2A]
gi|449151656|gb|EMB55383.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML8]
gi|449169567|gb|EMB72335.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4VF1]
gi|449187190|gb|EMB88986.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NMT4863]
gi|449198414|gb|EMB99527.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N34]
gi|449207416|gb|EMC08092.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML9]
gi|449229122|gb|EMC28456.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST6]
gi|449235110|gb|EMC34083.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML1]
gi|449238700|gb|EMC37452.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 66-2A]
gi|449256233|gb|EMC54064.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF12]
Length = 237
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H+ L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHYINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|295426138|ref|ZP_06818805.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
gi|295064174|gb|EFG55115.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
Length = 240
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L +Q+ Q Y L++ N +NLT + D +V +H DS+ + K+ +T
Sbjct: 11 AKHNFDLTDKQKTQFEQYFKDLVETNEHVNLTRITDKEDVYLKHFFDSITPLFTFKDVFT 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
L DVG GAG P + L I PD K+T+++S+ KR FL+ ++ L
Sbjct: 71 KGAT--------LCDVGAGAGFPSIPLKILLPDLKITIVDSLAKRLTFLKELIAKLGLSE 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE +D+ ARAVA M +L+EYCLPLV+ GG FVA KG + E
Sbjct: 123 VELVHGRAEDVGQNKLYREHFDLVTARAVANMTVLSEYCLPLVKKGGYFVALKGPKVEGE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ S +A+Q++G + + + +RT ++ K ++TPKKYPR GTP + P+
Sbjct: 183 LEESSKAIQVLGGEKVSETELTLPNSNEERTLILIKKIKQTPKKYPRQAGTPRRKPI 239
>gi|149182299|ref|ZP_01860778.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
gi|148849991|gb|EDL64162.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
Length = 238
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L ++Q Q Y + L++WN KMNLTA+ D EV +H DS+ T+
Sbjct: 17 LTSKQLAQFAEYYETLVEWNNKMNLTAITDKEEVYLKHFYDSI----------TAAFYLD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++ DVG GAG P + L I P +V++++S+NKR FL H L
Sbjct: 67 FNREIRVCDVGAGAGFPSIPLKICFPQIEVSIVDSLNKRITFLNHLSDKLGLEGTHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET ++ REQYD+ ARAVA M +L+E CLPLV+ G F A K +E+ +++
Sbjct: 127 RAETFARNPEHREQYDLVTARAVARMSVLSELCLPLVKNNGTFAAMKAASASDEMNVAKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L ++ S + +R +V K + TPKKYPR PGTP K+PL
Sbjct: 187 AITTLGGKLKEVHSFQLPLEESERNIIVIQKEKPTPKKYPRKPGTPNKLPL 237
>gi|332523926|ref|ZP_08400178.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
gi|332315190|gb|EGJ28175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
Length = 237
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q++Q + Y + L++WN+K+NLTA+ + N+V +H DS+A PI Y
Sbjct: 17 LTQKQKDQFNTYFNTLIEWNQKINLTAITEKNDVYLKHFYDSIA---PILQGYIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P +VT+++S+NKR FL H L V G
Sbjct: 69 -NQPIQLLDIGAGAGFPSLPMKIVFPQLQVTIIDSLNKRITFLAHLTQELGLDGVAFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FR +YD+ ARAVA M+IL+E +P ++VGG +A K +E+ ++ +
Sbjct: 128 RAEDFGQDKDFRSKYDLVTARAVARMQILSELTIPFLKVGGQLIALKAQAADQELNDARK 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + + Q P G R + K + TP KYPR G P K PL
Sbjct: 188 ALHLLFSQV--VSNHHYQLPNGDDRYMTIVEKKKETPNKYPRKAGIPNKKPL 237
>gi|289422527|ref|ZP_06424370.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
gi|289157099|gb|EFD05721.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
Length = 240
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
++ Y + L+ +N+ MNLT + D EV +H DS+AI K+ Y + +L
Sbjct: 26 DRFETYREILVDFNQHMNLTGITDQREVYIKHFLDSVAIF---KHGYLT-------GDLS 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG PGL IA PD ++TLL+S+NKR FL+ ++ V GRAE +G
Sbjct: 76 VIDVGTGAGFPGLPFKIANPDIELTLLDSLNKRINFLKEVGRGIGFDDIDYVHGRAEEIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
++ +R+++D+A ARAVA + +L E C+P V++GG F+ KG + +E++ ++ A++++G
Sbjct: 136 QNKDYRQKFDIATARAVANLPVLLELCVPFVKIGGFFICLKGPNAVKELEEAQNAIKILG 195
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L++L V+ + T ++ K + TP KYPR G P+K PL
Sbjct: 196 VKLVELIEVDLPDEELKHTVLIFKKEKNTPIKYPRKAGKPSKNPL 240
>gi|259048139|ref|ZP_05738540.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
gi|259035200|gb|EEW36455.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
Length = 237
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 132/235 (56%), Gaps = 11/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H TL+ Q++Q Y L++WN KMNLTA+ D V +H DSLA+ +
Sbjct: 14 HGITLSDEQKKQFDQYFHLLVEWNEKMNLTAITDEEGVYLKHFYDSLAL-----GFHHEL 68
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
D + L DVG GAG P + L I PD KVT+++S+NKR FL V L +VQ
Sbjct: 69 TDQT------LCDVGAGAGFPSIPLKIVFPDLKVTIVDSLNKRITFLNTLVETLGLKDVQ 122
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAET G++ FR +DV ARAVA++ +L+E+C+PLV+ G F+A K + E++
Sbjct: 123 CFHDRAETFGQNKDFRASFDVVTARAVAKLSVLSEFCMPLVKKHGYFLALKAAHTEVELE 182
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++A+ ++G + S + G R V LK++ TP KY R PG P K PL
Sbjct: 183 EAKKAIAILGGKVEGDVSFDLPYEGGNRHVVTILKTKETPNKYLRKPGLPLKKPL 237
>gi|421067276|ref|ZP_15528774.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A12]
gi|392450044|gb|EIW27098.1| Ribosomal RNA small subunit methyltransferase G [Pelosinus
fermentans A12]
Length = 238
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L Q + Y + L++WN+K+NLTA+ D NEV +H+ DSL + +
Sbjct: 17 SLTEEQLTRFSQYFELLIEWNQKINLTAITDPNEVAVKHMIDSL----------SCYDKV 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ K++DVGTGAG PGL L I PD K+TL +S+NKR +FL+ ++ +++ +
Sbjct: 67 IFKNGAKIIDVGTGAGFPGLPLKIYRPDLKLTLFDSLNKRILFLKEVAEKLEIPDIEFIH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G++ FRE YD+A +RAVA + IL+E CLP V VGG F+A KG +E+K S
Sbjct: 127 SRAEDGGRNKQFREVYDMAGSRAVARLSILSELCLPFVAVGGFFIALKGSQYSQEIKEST 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++ +++ R V K ++T YPR PG K PL
Sbjct: 187 SALRVLGGEIDKIDNIKLPGLDDIRAVVYIRKIKKTLPAYPRRPGIAEKNPL 238
>gi|422417393|ref|ZP_16494348.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
gi|313635557|gb|EFS01770.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
Length = 238
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ Q +Q H Y + L++WN KMNLTA+ + EV +H DS++ + N + S CD
Sbjct: 17 LSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD- 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
VG GAG P + + I P +V++++S+ KR FL+ L NV
Sbjct: 76 ----------VGAGAGFPSIPIKICFPHLEVSIVDSLKKRMTFLDALAEKLALTNVHFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ + RE+YD+ ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E
Sbjct: 126 DRAETFGQNKAHRERYDLVTARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ S +R V K++ TP KYPR PGTP K+P+
Sbjct: 186 KAIKVLGGKVVNHFSFSLPIEESERNIYVISKTKETPNKYPRKPGTPNKLPI 237
>gi|424764518|ref|ZP_18191942.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX1337RF]
gi|402419071|gb|EJV51353.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX1337RF]
Length = 242
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 132/233 (56%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 22 LTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 72 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 128
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G+++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 129 HDRAETFGQNLQFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 188
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 189 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 241
>gi|257871375|ref|ZP_05651028.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|357051637|ref|ZP_09112811.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
saccharolyticus 30_1]
gi|257805539|gb|EEV34361.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|355379561|gb|EHG26718.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
saccharolyticus 30_1]
Length = 237
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L++ Q +Q Y D L++WN+KMNLTA+ D EV +H DS+++ ++
Sbjct: 17 LSSEQLKQFATYYDRLIEWNQKMNLTAITDQKEVYLKHFYDSISL----------AFVTA 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L DVG+GAG P + L I P K+T+++S+NKR FL+ V+ L +V +
Sbjct: 67 FKEDAHLCDVGSGAGFPSIPLKIIFPQLKITIVDSLNKRITFLQTLVADLGLKDVYLFHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FRE +D ARAVA + IL E CLPLV+ G F A K +EE+ ++
Sbjct: 127 RAETFGQK-EFRESFDYVTARAVARLNILTELCLPLVKKNGYFFALKAAKSEEELIEAKS 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G ++ + +R ++ K++ TPKKYPR PG PAK P+
Sbjct: 186 AIALLGGKFIEEKKLTLPVSNDERHLLIIKKTKETPKKYPRKPGLPAKQPI 236
>gi|164686454|ref|ZP_02210482.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
gi|164604465|gb|EDQ97930.1| 16S rRNA methyltransferase GidB [Clostridium bartlettii DSM 16795]
Length = 239
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 133/222 (59%), Gaps = 14/222 (6%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCDSSCNSNLKLVD 127
Y + L++WN+KMNLT ++D EV +H DS++ + IKN + L+D
Sbjct: 29 YKEILVEWNQKMNLTGIEDEKEVFIKHFLDSISAVSKGYIKNG------------MSLID 76
Query: 128 VGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187
VGTGAG PG+ L I+ PD KVTLL+S+NKR FL+ + + +++ + GRAE GKD
Sbjct: 77 VGTGAGFPGMPLRISLPDLKVTLLDSLNKRINFLQEVANQIDIDDIEFIHGRAEDFGKDE 136
Query: 188 SFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 247
++RE +D+A ARAVA + L E+C+P V+VGG FV KG + E++ S++A++++G
Sbjct: 137 NYRECFDIATARAVAGLPALMEFCVPFVKVGGHFVCLKGPNANLELEESKKAMEVLGVEY 196
Query: 248 LQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ ++ +V K + TP KYPR G K P+
Sbjct: 197 IEKIDIKLPEIDLDHNILVFKKVKNTPSKYPRKAGKVTKNPI 238
>gi|319938660|ref|ZP_08013024.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
gi|319811710|gb|EFW07976.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
Length = 237
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ D EV +H DS A PI
Sbjct: 17 LTDRQKQQFEHYFELLVEWNEKINLTAITDKKEVYLKHFYDSSA---PILQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR +FL H L NV G
Sbjct: 69 -NKNIKLLDIGAGAGFPSLPMKILYPALDVTIIDSLNKRILFLNHLADELGLENVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M++LAE +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQVLAELTIPFLKVGGRLLALKASNAPEELTEAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + ++ Q P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVEK--NIHYQLPNGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|295693715|ref|YP_003602325.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
crispatus ST1]
gi|295031821|emb|CBL51300.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus ST1]
Length = 240
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q EQ +Y + L++ N +NLT + + +EV +H DS I P+
Sbjct: 11 SKHNFKLTDQQIEQFKIYFNYLIEVNENVNLTRITEEDEVYLKHFYDS---ITPLFTFGD 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P+ K+T+++S+ KR FL++ ++ L +
Sbjct: 68 VFKDGAT-----LCDVGAGAGFPSIPLKILQPELKITIVDSLAKRLTFLKNLITKLDLKD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ G F+A KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKKDGYFIALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLL---QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + ++A++L+G L+ +L ES+ +RT ++ K + TPKKYPR GTP + P+
Sbjct: 183 LDDGQKALELLGGKLIKEEELTLPESEE---ERTLILVQKVKATPKKYPRQAGTPRRKPI 239
>gi|259501221|ref|ZP_05744123.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|302191029|ref|ZP_07267283.1| 16S rRNA methyltransferase GidB [Lactobacillus iners AB-1]
gi|325911351|ref|ZP_08173764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
gi|259167348|gb|EEW51843.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|325476911|gb|EGC80064.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
Length = 239
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ RQQEQ Y L+ N K NLT + + +EV +H DSL P IK S+ +S
Sbjct: 17 LSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAES 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I PD K+T+++S+ KR FL+ V L N+ +V
Sbjct: 75 LC-------DVGAGAGFPSVPIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+++ RE +DV ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++
Sbjct: 128 SRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + C RT V K ++ KYPR G P + PL
Sbjct: 188 NALTILGGKIEKTCEFTLPDSMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 239
>gi|309803370|ref|ZP_07697465.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|309809024|ref|ZP_07702898.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|312871035|ref|ZP_07731137.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|312872104|ref|ZP_07732179.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|312873445|ref|ZP_07733495.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|312875319|ref|ZP_07735327.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|325913550|ref|ZP_08175915.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|329920815|ref|ZP_08277402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
gi|308164534|gb|EFO66786.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|308170680|gb|EFO72699.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|311089153|gb|EFQ47589.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|311090954|gb|EFQ49348.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|311092397|gb|EFQ50766.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|311093363|gb|EFQ51705.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|325477129|gb|EGC80276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|328935595|gb|EGG32062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ RQQEQ Y L+ N K NLT + + +EV +H DSL P IK S+ +S
Sbjct: 17 LSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAES 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I PD K+T+++S+ KR FL+ V L N+ +V
Sbjct: 75 LC-------DVGAGAGFPSVPIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+++ RE +DV ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++
Sbjct: 128 SRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + C RT V K ++ KYPR G P + PL
Sbjct: 188 NALTILGGQIEKTCEFTLPDSMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 239
>gi|449878048|ref|ZP_21783468.1| 16S rRNA methyltransferase GidB [Streptococcus mutans S1B]
gi|449250040|gb|EMC48123.1| 16S rRNA methyltransferase GidB [Streptococcus mutans S1B]
Length = 237
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H+ L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHYINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPYKYPRKAGMPNKKPL 237
>gi|255659829|ref|ZP_05405238.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
gi|260847904|gb|EEX67911.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
Length = 237
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ Q Q Y + L++WN KMNLTA+ + +EV +H+ DSL+ P +
Sbjct: 16 TLSENQLAQFTRYYELLVEWNEKMNLTAITEEHEVAVKHMVDSLSAYDP----------A 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + ++DVGTGAG PGL L I CP +TL++S+NKR FL+ V L +V V
Sbjct: 66 LFDGEISIIDVGTGAGFPGLPLKIFCPQVHLTLMDSLNKRVNFLQTVVDELGLEDVDCVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE + +REQYD+AV+RAVA + IL EYCLP V+ GG F+A KG EEV+ +
Sbjct: 126 ARAEEGARMKKYREQYDLAVSRAVARLPILCEYCLPFVKRGGHFLALKGRAFAEEVEEAA 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+++MG S + V +R + K+ TPK YPR GTPAK PL
Sbjct: 186 KAIKVMGGSQTDVREVHLPGLDDKRAIITVTKTMPTPKAYPRKAGTPAKNPL 237
>gi|355674387|ref|ZP_09059572.1| 16S rRNA methyltransferase GidB [Clostridium citroniae WAL-17108]
gi|354813950|gb|EHE98553.1| 16S rRNA methyltransferase GidB [Clostridium citroniae WAL-17108]
Length = 252
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 1/232 (0%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN-SYTSHCDS 117
L+ Q +Q Y + L++ N+ MNLTA+ + +EV+ +H DSL++ I+ T
Sbjct: 20 LSEHQMDQFFTYYEMLVEKNKVMNLTAITEEHEVVTKHFSDSLSLFAIIQEMEKTGKQGV 79
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +++DVGTGAG PG+ L I P +VTLL+S+NKR FLE L NV V
Sbjct: 80 GWFENSRIIDVGTGAGFPGIPLKIVFPGIRVTLLDSLNKRIKFLEEVCDALNLENVTFVH 139
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+ RE YD+ V+RAVA + L+EYC+P V+VGG FV K + EE+ ++
Sbjct: 140 GRAEDAGRLAEHRETYDLCVSRAVANLASLSEYCMPFVKVGGYFVPYKSGEIDEELVQAQ 199
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RA+ L+G + R+ VV K + KKYPR G P + PL
Sbjct: 200 RAIGLLGGEQKMVKKFLLPGTDAARSLVVIEKIKAISKKYPRKAGMPTREPL 251
>gi|309805118|ref|ZP_07699171.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
gi|308165572|gb|EFO67802.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
Length = 239
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ RQQEQ Y L+ N K NLT + + +EV +H DSL P IK S+ +S
Sbjct: 17 LSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT--PIIKFREIISNAES 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I PD K+T+++S+ KR FL+ V L N+ +V
Sbjct: 75 LC-------DVGAGAGFPSVPIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+++ RE +DV ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++
Sbjct: 128 SRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + C RT V K ++ KYPR G P + PL
Sbjct: 188 NALTILGGQIEKTCEFTLPDSMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 239
>gi|315305256|ref|ZP_07875212.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
gi|313626378|gb|EFR95555.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
Length = 238
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
LN Q +Q Y + L++WN KMNLTA+ + EV +H DS++ + + S CD
Sbjct: 17 LNEVQLKQFRDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFTEFRSICD- 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
VG GAG P + L I P +V++++S+ KR FLE L NV
Sbjct: 76 ----------VGAGAGFPSIPLKICFPHLEVSIVDSLKKRMTFLEALAEKLVLTNVHFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ + RE+Y++ ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E
Sbjct: 126 DRAETFGQNKAHREKYNLVTARAVARMSVLSELCLPLVKKGGTFLVMKAAQAEQEIQTAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ S +R V +K++ TP KYPR PGTP K+P+
Sbjct: 186 KAIKVLGGKIVDHFSFSLPVEESERNIYVIVKTKETPNKYPRKPGTPNKLPI 237
>gi|317472410|ref|ZP_07931735.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
gi|316900130|gb|EFV22119.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
Length = 236
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 134/232 (57%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L RQ Q +Y + L + N+ MNLTA+ + +V+ +H DSLA++ + C
Sbjct: 14 ALTDRQLAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALV-------KAECGF 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S K++DVGTGAG PG+ L IA P K+ LL+S+NKR FL+ + +L ++ V
Sbjct: 67 SSQ---KILDVGTGAGFPGIPLKIAFPGLKIVLLDSLNKRVKFLQEVIDALELHDITAVH 123
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + +REQ+D+ V+RAVA + L+EYCLP V+V G+F+ K +EE++ +
Sbjct: 124 GRAEDYARQKEYREQFDLVVSRAVANLSTLSEYCLPYVKVSGMFLPYKSGRIEEEMREGK 183
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV L+G + + S +RT + K + PK+YPR G P+K P+
Sbjct: 184 HAVFLLGGEIEDVVSFVLPGTDMERTILKIKKQKAAPKRYPRKAGLPSKEPI 235
>gi|257899263|ref|ZP_05678916.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|293572710|ref|ZP_06683674.1| methyltransferase GidB [Enterococcus faecium E980]
gi|430842561|ref|ZP_19460474.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1007]
gi|431081774|ref|ZP_19495864.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1604]
gi|431116719|ref|ZP_19497985.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1613]
gi|431437989|ref|ZP_19513152.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1630]
gi|431592420|ref|ZP_19521656.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1861]
gi|431739136|ref|ZP_19528076.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1972]
gi|431760018|ref|ZP_19548622.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3346]
gi|257837175|gb|EEV62249.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|291607202|gb|EFF36560.1| methyltransferase GidB [Enterococcus faecium E980]
gi|430492982|gb|ELA69318.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1007]
gi|430565706|gb|ELB04852.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1604]
gi|430568499|gb|ELB07546.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1613]
gi|430586824|gb|ELB25066.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1630]
gi|430592045|gb|ELB30072.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1861]
gi|430596679|gb|ELB34503.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1972]
gi|430625287|gb|ELB61927.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3346]
Length = 237
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 131/233 (56%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q EQ +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMEQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSVPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|168334917|ref|ZP_02693037.1| methyltransferase GidB [Epulopiscium sp. 'N.t. morphotype B']
Length = 236
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 127/220 (57%), Gaps = 10/220 (4%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y D LL+WN+K+NLTA+ +E++ +H DSL++ D NL VDVG
Sbjct: 27 YKDLLLEWNQKLNLTAITKEDEIITKHFLDSLSV--------NMAVDLLKYKNL--VDVG 76
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PGLVL IA P + L++S+ KR FL+ + + +L +V V GRAE + KDV +
Sbjct: 77 TGAGFPGLVLKIAYPHLNIVLVDSLKKRLTFLDAVIEILKLKHVVTVHGRAEDIAKDVQY 136
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE++D+ RAV+ + L+EY LP VR GG F+A KG EEV + A++++G L +
Sbjct: 137 REKFDICSPRAVSNLATLSEYALPFVRTGGYFIALKGQKLXEEVAQATNAIKILGGELER 196
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ V + V K T KKYPR G PAK PL
Sbjct: 197 VVDVPIPATDIVHKIAVIKKVGFTNKKYPRKAGEPAKNPL 236
>gi|418574786|ref|ZP_13138948.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|418577289|ref|ZP_13141414.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379324321|gb|EHY91474.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379326692|gb|EHY93808.1| glucose-inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 239
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 126/216 (58%), Gaps = 11/216 (5%)
Query: 74 LLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 133
L++WN KMNLT++ + +EV +H DS+A + YT+ L + DVG GAG
Sbjct: 32 LVEWNEKMNLTSITEEHEVYLKHFYDSIAT-----SFYTN-----LTKELTICDVGAGAG 81
Query: 134 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 193
P + L I P+ KVT+++S+NKR FL +L NV V RAET GK +R Y
Sbjct: 82 FPSIPLKIIFPNLKVTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAETYGKG-DYRASY 140
Query: 194 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253
D+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ + + ++G +L S
Sbjct: 141 DIVTARAVARLSVLSELCLPLVKKGGHFIALKSSKGEEELEEARFGIGVLGGKVLDTISY 200
Query: 254 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 201 ELPEDAGERQMIIIDKRSQTPKKYPRKPGTPNKSPL 236
>gi|331268196|ref|YP_004394688.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
gi|329124746|gb|AEB74691.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
Length = 243
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y D L WN K+NLTA+ + E++++H DS+ I + Y +
Sbjct: 22 FNDKKYNQFIKYKDLLKDWNSKVNLTAITEDEEIIKKHFIDSMKIF---QFEYLKKAN-- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTG G PG+ + I P+ ++ LL+S+ KR L+ + + +V+ + G
Sbjct: 77 -----KIIDIGTGGGFPGIPMKIIRPEVQMVLLDSLKKRINVLDDILCKIDIDDVETIHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++V +REQ+D V+RAVA + L+E+CLP V+VGG FVA KG EEVK +++
Sbjct: 132 RAEEFSRNVRYREQFDAVVSRAVANLASLSEFCLPYVKVGGYFVALKGPSVDEEVKIAKK 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ VE ++ + V+ K + TPK+YPR GT K PL
Sbjct: 192 AIAILGGKLEEIREVEIENSDLKHNLVIIKKIKNTPKQYPRKAGTATKKPL 242
>gi|403385768|ref|ZP_10927825.1| methyltransferase gidB [Kurthia sp. JC30]
Length = 238
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 18/235 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+T Q Q Y + L++WN KMNLTA+ D+ V +H DS+ S + D
Sbjct: 17 LSTEQMNQFKTYFETLVEWNEKMNLTAITDLESVYLKHFYDSI--------SAAFYVD-- 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N+ L DVG GAG P + + I P +T+++S+NKR FL H + L N+ V
Sbjct: 67 FNNVTTLCDVGAGAGFPSIPIKICYPHLHITIVDSLNKRIQFLNHLSTELGLTNMNFVHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +REQ+D+ ARAVA M +L+E C+PLV+ GG FVA K ++E+K++++
Sbjct: 127 RAEDFGRNPQYREQFDLVTARAVARMSVLSELCVPLVKEGGKFVAMKAASGEDELKDAKK 186
Query: 239 AVQLMGASLLQ----LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L Q L VE R K + TPKKYPR PG P K P+
Sbjct: 187 ALTTLGVKLRQEFRFLLPVEE----SDRVIFAFDKVKPTPKKYPRKPGIPNKSPI 237
>gi|349612485|ref|ZP_08891704.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
7_1_47FAA]
gi|348608809|gb|EGY58778.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
7_1_47FAA]
Length = 239
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ RQQEQ Y L+ N K NLT + + +EV +H DSL P IK S+ +S
Sbjct: 17 LSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAES 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I PD K+T+++S+ KR FL+ V L N+ +V
Sbjct: 75 LC-------DVGAGAGFPSVPIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+++ RE +DV ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++
Sbjct: 128 SRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + C RT V K ++ KYPR G P + PL
Sbjct: 188 NALTILGGKIEKTCEFTLPDSMDDRTLVAVKKIKKMSNKYPRQAGIPNRKPL 239
>gi|313890867|ref|ZP_07824491.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|416851386|ref|ZP_11908531.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudoporcinus LQ 940-04]
gi|313120765|gb|EFR43880.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|356738875|gb|EHI64107.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudoporcinus LQ 940-04]
Length = 237
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 136/238 (57%), Gaps = 13/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+S +E L +Q++Q Y L++WN+K+NLTA+ + N+V +H DS+A PI Y
Sbjct: 12 TSGYE-LKQKQKDQFDTYFKVLIEWNQKINLTAITEKNDVYLKHFYDSIA---PILQGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N ++L+D+G GAG P L + I P +VT+++S+NKR FL H L
Sbjct: 68 P------NQPIQLLDIGAGAGFPSLPMKIIFPQLQVTIIDSLNKRITFLAHLTQELDLDG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D FR +YD+ ARAVA M+IL+E +P ++VGG +A K +E
Sbjct: 122 VTFYHGRAEDFGQDKGFRSKYDLVTARAVARMQILSELTIPFLKVGGRLIALKAQAADQE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + +A+ L+ + + + + Q P G +R + K + TP KYPR G P K PL
Sbjct: 182 LEQARKALHLLFSQV--VSNHHYQLPNGDERYMTIVEKKKETPNKYPRKAGIPNKKPL 237
>gi|441472618|emb|CCQ22373.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes]
gi|441475767|emb|CCQ25521.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes N53-1]
Length = 238
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PG P K+P+
Sbjct: 187 AIKLFGGKVEEHFAFSLPVEESERNIYVITKTKETPNKYPRKPGIPNKLPI 237
>gi|46908989|ref|YP_015378.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes serotype 4b
str. F2365]
gi|405754021|ref|YP_006677486.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2378]
gi|424715629|ref|YP_007016344.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. LL195]
gi|55976451|sp|Q71VW1.1|RSMG_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46882262|gb|AAT05555.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 4b str. F2365]
gi|404223221|emb|CBY74584.1| glucose-inhibited division protein B [Listeria monocytogenes
SLCC2378]
gi|424014813|emb|CCO65353.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. LL195]
Length = 238
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P +V++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLEVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFAFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|227889290|ref|ZP_04007095.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
gi|227850092|gb|EEJ60178.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
Length = 239
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 132/234 (56%), Gaps = 9/234 (3%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE LN +Q +Q Y D L+++N+K+NLT + D NEV +H DS+ + + +
Sbjct: 15 FE-LNEKQTKQFATYYDKLIEFNKKVNLTRIIDKNEVYLKHFFDSITPLLEFPDLFKGEK 73
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
L DVG GAG P L + I CP+ +T+++S+ KR FL+ V+ L V +
Sbjct: 74 --------TLCDVGAGAGFPSLPIKILCPNLSITIVDSLGKRLKFLDELVNDLGLDKVTL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V RAE G++ RE++D+ RAVA M +L+EYCLPL VGG VA KG Q+E+
Sbjct: 126 VHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPLAEVGGYLVALKGPKAQDELAE 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++G + + + RT +V K + TPKKYPR GTP K PL
Sbjct: 186 AKHAIDVLGGKVEDVKELTLPDTDDDRTLIVVEKIKATPKKYPRQAGTPNKKPL 239
>gi|433543010|ref|ZP_20499425.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus agri
BAB-2500]
gi|432185684|gb|ELK43170.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus agri
BAB-2500]
Length = 238
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L RQ+EQ + L++WN KMNLT + + +V +H DS I P +
Sbjct: 16 SLTDRQKEQFDQFFRLLVEWNEKMNLTGITEEGQVYIKHFYDS--ITPAFYFPF------ 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +VD+G GAG P + L I P K+T+++S+NKR FL+H S L +V V
Sbjct: 68 --DQVKSVVDIGGGAGFPSIPLKICFPHLKMTIIDSLNKRMSFLQHVASELGLADVHPVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ +REQ+D+ VARAVA + +LAE+CLP + G F+A KG D E+ ++
Sbjct: 126 GRAEDRGQEAGYREQFDLVVARAVARLNLLAEFCLPFAQPKGHFIALKGADITTELNEAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G ++ + + G+R V+ K TPK YPR G PAK PL
Sbjct: 186 TAIKTLGGKTRKVETFQLLEDAGERNIVIIEKIEATPKNYPRKAGVPAKKPL 237
>gi|73663751|ref|YP_302532.1| 16S rRNA methyltransferase GidB [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123641435|sp|Q49UI6.1|RSMG_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72496266|dbj|BAE19587.1| glucose inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 239
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 125/216 (57%), Gaps = 11/216 (5%)
Query: 74 LLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 133
L++WN KMNLT++ + +EV +H DS+A + YT L + DVG GAG
Sbjct: 32 LVEWNEKMNLTSITEEHEVYLKHFYDSIAT-----SFYTD-----LTKELTICDVGAGAG 81
Query: 134 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 193
P + L I P+ KVT+++S+NKR FL +L NV V RAET GK +R Y
Sbjct: 82 FPSIPLKIIFPNLKVTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAETYGKG-DYRASY 140
Query: 194 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253
D+ ARAVA + +L+E CLPLV+ GG F+A K +EE++ + + ++G +L S
Sbjct: 141 DIVTARAVARLSVLSELCLPLVKKGGHFIALKSSKGEEELEEARFGIGVLGGKVLDTISY 200
Query: 254 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 201 ELPEDAGERQMIIIDKRSQTPKKYPRKPGTPNKSPL 236
>gi|407478662|ref|YP_006792539.1| ribosomal RNA small subunit methyltransferase G [Exiguobacterium
antarcticum B7]
gi|407062741|gb|AFS71931.1| Ribosomal RNA small subunit methyltransferase G [Exiguobacterium
antarcticum B7]
Length = 238
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ Q +Q Y + L++WN KMNLTA+ +V +H DS I +T ++
Sbjct: 17 VSEHQLKQFQRYYELLVEWNEKMNLTAITAEEDVYLKHFYDS--ITAAFYFDFTE-VETV 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KVT+++S+NKR FL + L V G
Sbjct: 74 C-------DVGAGAGFPSLPIKIMFPHLKVTIIDSLNKRIGFLNMLATELGLEGVAFHHG 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FRE +DV ARAVA M +LAEYCLPL +VGG FVA K EE++
Sbjct: 127 RAEEFGKNKQFREHFDVVTARAVARMSVLAEYCLPLAKVGGQFVALKAAKLGEELEEGAT 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +L + + +R V+ K R TP KYPR GTPAK PL
Sbjct: 187 ALKVLGGNLRESFQFQLPGEESERNIVIVGKKRLTPGKYPRKAGTPAKDPL 237
>gi|227879182|ref|ZP_03997054.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256849430|ref|ZP_05554862.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|262046097|ref|ZP_06019060.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|312976919|ref|ZP_07788668.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|423319345|ref|ZP_17297221.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB049-03]
gi|423320888|ref|ZP_17298760.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB077-07]
gi|227861185|gb|EEJ68832.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256713546|gb|EEU28535.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|260573427|gb|EEX29984.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|310896247|gb|EFQ45312.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|405588766|gb|EKB62372.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB049-03]
gi|405598474|gb|EKB71689.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus FB077-07]
Length = 240
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q EQ +Y + L++ N +NLT + + +EV +H DS I P+
Sbjct: 11 SKHNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDS---ITPLFTFGD 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P+ K+T+++S+ KR FL++ ++ L +
Sbjct: 68 VFKDGAT-----LCDVGAGAGFPSIPLKILQPELKITIVDSLAKRLTFLKNLITKLDLKD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ G F+A KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKKDGYFIALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLL---QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + ++A++L+G L+ +L ES+ +RT ++ K + TPKKYPR GTP + P+
Sbjct: 183 LDDGQKALELLGGKLIKEEELTLPESEE---ERTLILVQKVKATPKKYPRQAGTPRRKPI 239
>gi|345018963|ref|YP_004821316.1| ribosomal RNA small subunit methyltransferase G [Thermoanaerobacter
wiegelii Rt8.B1]
gi|392940015|ref|ZP_10305659.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Thermoanaerobacter siderophilus SR4]
gi|344034306|gb|AEM80032.1| Ribosomal RNA small subunit methyltransferase G [Thermoanaerobacter
wiegelii Rt8.B1]
gi|392291765|gb|EIW00209.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Thermoanaerobacter siderophilus SR4]
Length = 240
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 134/227 (59%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E Y LL+WN+KMNLTA+ + +EV+ +H+ DSL+++ K
Sbjct: 26 EHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVK----------SGKIKGEEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL+S KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPSIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D++VARAVA + +L EY LP V+VGG F+A KG + +EE+K+S++A++ +
Sbjct: 136 KDIKYREQFDLSVARAVAPLNVLLEYTLPFVQVGGYFIALKGREVEEEIKSSQKALKELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ + + PF ++ K P KYPR + PL
Sbjct: 196 GEIEEVKQI--RLPFSDILHHLIIIRKGDNCPLKYPRKANAIKRSPL 240
>gi|160893420|ref|ZP_02074205.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
gi|156864815|gb|EDO58246.1| 16S rRNA methyltransferase GidB [Clostridium sp. L2-50]
Length = 240
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q EQ Y + L++WN+ MNLTA+ + +V+ +H DSL + K
Sbjct: 15 LSDHQLEQFQKYYELLVEWNKVMNLTAIIEKEDVIIKHFADSLLLAKYKK---------- 64
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ +L ++DVGTGAG PG+ L IA P KVTL++S+NKR FL + +L +++ V
Sbjct: 65 LDESLSVIDVGTGAGFPGIPLKIAFPGLKVTLMDSLNKRVKFLNEVIRTLELDDIEAVHS 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++V +RE+YD+AV+RAVA + L+E+C+P V+ GG F+ K EE+ ++
Sbjct: 125 RAEDGGRNVQYREKYDLAVSRAVANLSSLSEFCMPFVKTGGYFIPYKASGLDEEIHAGKK 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + + +R V K TP++YPR GT K PL
Sbjct: 185 AIRILGGQVENIFHTTIPDTDMERCFVFVKKIAATPEEYPRKAGTATKKPL 235
>gi|440782447|ref|ZP_20960464.1| 16S rRNA methyltransferase GidB [Clostridium pasteurianum DSM 525]
gi|440219971|gb|ELP59180.1| 16S rRNA methyltransferase GidB [Clostridium pasteurianum DSM 525]
Length = 239
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 135/234 (57%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAII--PPIKNSYTSHC 115
N + + Y + + +WN K+NLTA+ + E++++H DS+ I P +KN+
Sbjct: 17 VFNEEKYNKFMKYKNLIKEWNEKINLTAITEDGEIVKKHFIDSIKIFRFPFLKNAKN--- 73
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
++D+GTGAG PG+ + I + V LL+S+NKR FL + L N++
Sbjct: 74 ---------IIDIGTGAGFPGIPIKIINEEICVVLLDSLNKRINFLNEVIDRLDLKNIKT 124
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ GRAE K++ +RE++D+A +RAVA M +L+E+C+P V+VGG FVA KG +EE+
Sbjct: 125 IHGRAEDYAKNIEYREKFDIATSRAVANMTVLSEFCIPYVKVGGYFVALKGPSIEEEILE 184
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ A+ +G L + V+ + + V+ K ++TPK++PR G K PL
Sbjct: 185 SKNAIGTLGGRLEDIIKVDIEESDLKHNLVIVKKIKQTPKQFPRKSGIVTKKPL 238
>gi|15674490|ref|NP_268664.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SF370]
gi|71910092|ref|YP_281642.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS5005]
gi|410679965|ref|YP_006932367.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes A20]
gi|20177901|sp|Q9A1D7.1|RSMG_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13621590|gb|AAK33385.1| putative glucose-inhibited division protein [Streptococcus pyogenes
M1 GAS]
gi|71852874|gb|AAZ50897.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS5005]
gi|395453337|dbj|BAM29676.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes M1 476]
gi|409692554|gb|AFV37414.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes A20]
Length = 237
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 137/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y +L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLSSKQKEQFDTYFKSLVEWNTKINLTAITEENEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|402833207|ref|ZP_10881827.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. CM52]
gi|402281199|gb|EJU29890.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. CM52]
Length = 238
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q E+ +Y L++WN KMNLTA+ + EV +HI DSL + I+
Sbjct: 17 LDAKQIEKFGIYYRLLIEWNAKMNLTAITEPREVAVKHIVDSLTALRGIEE--------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L+L+DVGTGAG PG+ L I PD ++TLL+S+ KR FLE V L + + G
Sbjct: 68 -RDSLRLIDVGTGAGFPGIPLKIVRPDLQLTLLDSLKKRVHFLETVVEALGLEGAECLHG 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + RE++D+AV+RAVA + +LAEY LP VR+GG +A KG +EE K +ER
Sbjct: 127 RAEEAARQSALRERFDIAVSRAVARLPVLAEYLLPFVRIGGTAIALKGLHSEEEAKEAER 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G ++ V +R +V K R TPK YPR G PAK PL
Sbjct: 187 AVKILGGRAIESIPVALPDLSDKRAVLVIKKERTTPKAYPRKAGKPAKEPL 237
>gi|449995005|ref|ZP_21822859.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A9]
gi|449184780|gb|EMB86699.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A9]
Length = 237
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H+ L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHYINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLFELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|329116883|ref|ZP_08245600.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|333905633|ref|YP_004479504.1| methyltransferase GidB [Streptococcus parauberis KCTC 11537]
gi|326907288|gb|EGE54202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|333120898|gb|AEF25832.1| methyltransferase GidB [Streptococcus parauberis KCTC 11537]
gi|456370306|gb|EMF49202.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase
[Streptococcus parauberis KRS-02109]
gi|457096122|gb|EMG26593.1| rRNA small subunit 7-methylguanosine methyltransferase
[Streptococcus parauberis KRS-02083]
Length = 237
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 136/240 (56%), Gaps = 16/240 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
SH L Q++Q Y++ L++WN+K+NLTA+ D++EV +H DS+A PI +
Sbjct: 11 ESHQIFLTDYQKDQFKTYLETLIEWNQKINLTAITDLDEVYLKHFYDSIA---PILQGHI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ N +KL+D+G GAG P + + I CP+ VT+++S+NKR FL L N
Sbjct: 68 T------NQPIKLLDIGAGAGFPSIPMKIICPELDVTIIDSLNKRINFLNLLADKLNLTN 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR Q+D+ ARAVA M++L+E +P +R+ G +A K +E
Sbjct: 122 VHFYHGRAEDFGQDKNFRGQFDIVTARAVARMQVLSELTIPFLRIKGQLIALKAQAADQE 181
Query: 233 VKNSERAVQLMGASLLQLCSVES--QSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++++A+ A+L + Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LSDAKKAL----ATLFSQVDLNQHYQLPNGDSRYITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|256844007|ref|ZP_05549494.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|293380690|ref|ZP_06626739.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
gi|256613912|gb|EEU19114.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|290922730|gb|EFD99683.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
Length = 240
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 145/240 (60%), Gaps = 14/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q EQ +Y + L++ N +NLT + + +EV +H DS I P+
Sbjct: 11 SKHNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDS---ITPLFTFGD 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P+ K+T+++S+ KR FL++ ++ L +
Sbjct: 68 VFKDGAT-----LCDVGAGAGFPSIPLKILQPELKITIVDSLAKRLTFLKNLITKLDLKD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ G F+A KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKKDGYFIALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLL---QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + ++A++L+G L+ +L ES+ +RT ++ K + TPKKYPR GTP + P+
Sbjct: 183 LDDGQKALELLGGKLVKEEELTLPESEE---ERTLILVQKVKATPKKYPRQAGTPRRKPI 239
>gi|257896276|ref|ZP_05675929.1| glucose inhibited division protein [Enterococcus faecium Com12]
gi|257832841|gb|EEV59262.1| glucose inhibited division protein [Enterococcus faecium Com12]
Length = 237
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 131/233 (56%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSMPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|217965994|ref|YP_002351672.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes HCC23]
gi|386009580|ref|YP_005927858.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
gi|386028206|ref|YP_005948982.1| putative glucose inhibited division protein B [Listeria
monocytogenes M7]
gi|254766895|sp|B8DD12.1|RSMG_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217335264|gb|ACK41058.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|307572390|emb|CAR85569.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
gi|336024787|gb|AEH93924.1| putative glucose inhibited division protein B; putative 16S rRNA
methyltransferase [Listeria monocytogenes M7]
Length = 238
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + D+
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFDTI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P L + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ + RE+YD+ ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAEIFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G + + + +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVEEHFAFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPI 237
>gi|300173934|ref|YP_003773100.1| methyltransferase GidB [Leuconostoc gasicomitatum LMG 18811]
gi|299888313|emb|CBL92281.1| Methyltransferase gidB [Leuconostoc gasicomitatum LMG 18811]
Length = 239
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q +Q Y D L+ N +NLTA+ + N+V +H DSL + + Y +
Sbjct: 16 TLTKHQIQQFEDYFDMLIATNEHVNLTAITEKNDVYLKHFYDSLTV-----SFYEQDLQT 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + L+D+GTGAG P L L I P K+T+++S+ KR FL+ V+ L V+I+
Sbjct: 71 AEKT---LIDIGTGAGFPSLPLKIVFPQLKITMVDSLQKRINFLQEVVTTLDLSGVEIIH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G+++ +RE +D A ARAVA +LAEY LP V+ GG F+ KG Q+E+ + +
Sbjct: 128 GRAEDIGQNLRYREAFDYATARAVARTSVLAEYTLPFVKKGGKFIVMKGAAAQQELADGK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L E P G R + K+++TPK+YPR GTP+K P+
Sbjct: 188 QALATLGGVLHD--EFEFSLPNGDVRYIQIVNKNKKTPKQYPRQAGTPSKKPI 238
>gi|328958782|ref|YP_004376168.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
gi|328675106|gb|AEB31152.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
Length = 238
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 124/228 (54%), Gaps = 9/228 (3%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
+Q EQ Y+ L +WN K+NLTA+ EV +H DS I + +T S C
Sbjct: 20 KQMEQFDQYLKLLQEWNGKINLTAITQKEEVYLKHFYDS--ITAGLYVDFTKGVQSLC-- 75
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
DVG GAG P + L I P +VT+++S+NKR FL +L V RAE
Sbjct: 76 -----DVGAGAGFPSIPLKIIFPQLEVTIVDSLNKRIQFLTLLAQTLELDGVHFYHDRAE 130
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
T G++ FRE +D ARAVA M +L+E CLPLV+ GLF+A K + +EE+ ++A+
Sbjct: 131 TFGQNKQFRESFDFVTARAVARMSVLSELCLPLVKKDGLFIALKASNTKEEMAEGQKAIA 190
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G + E G+R V+ K + +PKKYPR PGTP K PL
Sbjct: 191 TLGGKFREEFVFELPREAGERHIVLIDKKKESPKKYPRKPGTPNKNPL 238
>gi|239624144|ref|ZP_04667175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520530|gb|EEQ60396.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 6/234 (2%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH--C 115
TL+ Q EQ + Y + L++ N+ MNLTA+ + NEV+ +H DSL++ +K
Sbjct: 11 TLSDVQMEQFYSYYEILVEKNKVMNLTAITEENEVVTKHFSDSLSLFGLLKEMQVGGDAW 70
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
+CN ++DVGTGAG PG+ L I P+ KVTLL+S+NKR +LE + L V
Sbjct: 71 YKTCN----VIDVGTGAGFPGIPLKIVFPELKVTLLDSLNKRVKWLEEVCTELHLEGVCC 126
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE +G+ + RE YD+ V+RAVA + L+EYC+P V+VGG F+ K + EE+
Sbjct: 127 VHGRAEDIGRQAAHREVYDLCVSRAVANLASLSEYCMPFVKVGGYFIPYKSGEIDEELNQ 186
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++A+ L+G L + R+ V+ K + KK+PR G P K PL
Sbjct: 187 AKKAIGLLGGKLKSVEKFVLPGTDAARSLVMIEKVKPVSKKFPRKAGLPTKEPL 240
>gi|227550629|ref|ZP_03980678.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
gi|227180230|gb|EEI61202.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
Length = 242
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 131/233 (56%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 22 LTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 72 FTQPLSLCDVGSGAGFPSMPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 128
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 129 HDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 188
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 189 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 241
>gi|352518702|ref|YP_004888019.1| methyltransferase GidB [Tetragenococcus halophilus NBRC 12172]
gi|348602809|dbj|BAK95855.1| methyltransferase GidB [Tetragenococcus halophilus NBRC 12172]
Length = 238
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 10/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H L+ +Q +Q Y L++WN+K+NLTA+ D NEV +H DS+A+ +++ +
Sbjct: 13 HHIELSQKQIQQFEHYYKLLIEWNQKINLTAITDKNEVYLKHFYDSVAL------AFSVN 66
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
D + + D+G+GAG P + L I P+ K+T+++S+NKR FL V L V
Sbjct: 67 LDKKAS----ICDIGSGAGFPSIPLKIVFPELKITIVDSLNKRINFLHTLVKELGLTEVY 122
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
+ RAE G+D+ R YD ARAVA + +L E CLPLV+ G F A K QEE+
Sbjct: 123 LFHDRAENFGQDLKNRSSYDYVTARAVARLDVLCELCLPLVKKNGYFYALKAAKSQEELT 182
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++A+ +G ++ + +R +V K++ TPKKYPR PG P K P+
Sbjct: 183 EAKKAIATLGGKFIEDKKTYLPNTQDERNILVIEKTKETPKKYPRKPGLPNKKPI 237
>gi|331089221|ref|ZP_08338123.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
gi|330405773|gb|EGG85302.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
Length = 239
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q+EQ Y + L++WN MNLT + D +EV +H DSL ++ +N + D+
Sbjct: 18 NLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTLV---RNIDMNKIDA 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PGL + IA P V LL+S+NKR FL + L +V+ +
Sbjct: 75 -------VIDIGTGAGFPGLPIKIAFPHIHVVLLDSLNKRIKFLNAVIEELDLADVETLH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE K +REQ+D+ V+RAVA + L+EYC+P V+ G FV+ K EE++ +E
Sbjct: 128 GRAEDYAKRKEYREQFDLCVSRAVANLSTLSEYCIPFVKRNGYFVSYKSGSSDEEIQQAE 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+AV ++G + + R V K + TP KYPR GTP++ PL
Sbjct: 188 KAVNILGGKIEKTDKFLLPETDMGRALVNIKKIKITPAKYPRKAGTPSREPL 239
>gi|326390370|ref|ZP_08211929.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
gi|325993647|gb|EGD52080.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
Length = 240
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 135/227 (59%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E Y LL+WN+KMNLTA+ + +EV+ +H+ DSL+++ + K
Sbjct: 26 EHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVK----------SGKIKGDEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL++ KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPSIPLKIVFPKLKATLLDASKKRITFLEEVINKLGINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D++VARAVA + +L EY LP V+VGG F+A KG + +EE+K+S++A++ +
Sbjct: 136 KDIKYREQFDLSVARAVAPLNVLLEYTLPFVQVGGYFIALKGREVEEEIKSSQKALKELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ + + PF ++ K P KYPR + PL
Sbjct: 196 GEIEEVKQI--RLPFSDILHHLIIIRKGDNCPLKYPRKANAIKRSPL 240
>gi|315284177|ref|ZP_07872085.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
gi|313612177|gb|EFR86411.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
Length = 238
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q H Y + L++WN KMNLTA+ D EV +H DS++ + + +S
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVD---FTKFESI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P + + I P KV++++S+ KR FL+ L +V
Sbjct: 74 C-------DVGAGAGFPSIPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ + RE+YD ARAVA M +L+E C+PLV+ GG F+ K ++E++ +E+
Sbjct: 127 RAETFGQNKAHREKYDFVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L G ++ S +R V K++ TP KYPR PGTP K+P+
Sbjct: 187 AIKLFGGKVVNHYSFLLPVEESERNIYVINKTKETPNKYPRKPGTPNKLPI 237
>gi|94991792|ref|YP_599891.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS2096]
gi|417857495|ref|ZP_12502554.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes HKU
QMH11M0907901]
gi|166224618|sp|Q1JDG1.1|RSMG_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94545300|gb|ABF35347.1| Methyltransferase gidB [Streptococcus pyogenes MGAS2096]
gi|387934450|gb|EIK42563.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 237
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 137/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI ++ +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIA---PILQAFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|197302260|ref|ZP_03167319.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
gi|197298691|gb|EDY33232.1| 16S rRNA methyltransferase GidB [Ruminococcus lactaris ATCC 29176]
Length = 247
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+EQ Y + L++WN+ MNLT + + EV +H DSL+I +K+ +
Sbjct: 25 LNEHQKEQFDQYYELLVEWNKVMNLTGITEYEEVNLKHFTDSLSI-ARVKDMHQVQS--- 80
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++D+GTGAG PG+ L I P+ +V LL+S+NKR FL+ + L ++ + G
Sbjct: 81 ------VIDIGTGAGFPGIPLKIVYPELEVVLLDSLNKRIKFLDEVIRTLGLEKIRTIHG 134
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +RE +D+ V+RAVA + L+EYCLP V+V G F++ K D EE++++E
Sbjct: 135 RAEDFAKKKEYRECFDLCVSRAVANLATLSEYCLPFVKVEGEFISYKSGDSDEEIRDAEF 194
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G + + + R+ V K + T KYPR G P+K PL
Sbjct: 195 AVKVLGGKITDVDKFQLPGTDMGRSLVKIKKVKNTAGKYPRKAGLPSKEPL 245
>gi|257888105|ref|ZP_05667758.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|293379357|ref|ZP_06625501.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|431036303|ref|ZP_19492073.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1590]
gi|431753203|ref|ZP_19541880.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2620]
gi|431758028|ref|ZP_19546657.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3083]
gi|431763294|ref|ZP_19551847.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3548]
gi|257824159|gb|EEV51091.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|292641880|gb|EFF60046.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|430562843|gb|ELB02074.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1590]
gi|430612708|gb|ELB49743.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2620]
gi|430618533|gb|ELB55380.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3083]
gi|430622988|gb|ELB59698.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E3548]
Length = 237
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 131/233 (56%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|94987908|ref|YP_596009.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS9429]
gi|166224619|sp|Q1JND4.1|RSMG_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94541416|gb|ABF31465.1| methyltransferase [Streptococcus pyogenes MGAS9429]
Length = 237
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 137/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI ++ +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYPQHFYDSIA---PILQAFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|251781805|ref|YP_002996107.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316330|ref|YP_006012494.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|408401072|ref|YP_006859035.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|410494117|ref|YP_006903963.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753420|ref|ZP_12401545.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|242390434|dbj|BAH80893.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126617|gb|ADX23914.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333770178|gb|EGL47233.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|407967300|dbj|BAM60538.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|410439277|emb|CCI61905.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 237
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+EQ Y L++WN K+NLTA+ + N+V +H DS+A PI + +
Sbjct: 17 LTMKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIA---PILQGFLA----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ +VT+++S+NKR FL H L V G
Sbjct: 69 -NEPIRLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRIAFLTHLAESLALDKVHFFHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FR Q+DV ARAVA M++LAE +P +++GG +A K +E+++++
Sbjct: 128 RAEDFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLKIGGRLIALKAQAADQELEDAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + Q P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFGKV--TTNHHYQLPNGDARYITVVEKKKETPNKYPRKAGLPNKKPL 237
>gi|450012225|ref|ZP_21829528.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A19]
gi|450022691|ref|ZP_21830089.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U138]
gi|450176360|ref|ZP_21885751.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM1]
gi|449188666|gb|EMB90367.1| 16S rRNA methyltransferase GidB [Streptococcus mutans A19]
gi|449194593|gb|EMB95945.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U138]
gi|449245342|gb|EMC43681.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM1]
Length = 237
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H+ L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS I P+ + Y
Sbjct: 11 AKHYINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDS---IVPLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|431795403|ref|YP_007222308.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785629|gb|AGA70912.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 239
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 134/231 (58%), Gaps = 13/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q EQ +Y D L++WN+K+NLT++ + E++ +H DSL++IP + +
Sbjct: 21 LSDNQLEQFSVYADRLVEWNKKVNLTSITNPEEIILKHFVDSLSLIPLVAGN-------- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K+ D+GTGAG PGL + I P KV L++S+ KR FL ++ + V+ +
Sbjct: 73 -----KMADIGTGAGFPGLPIKIMLPQLKVYLVDSLAKRLEFLNVVLNELNIQEVETIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ +RE +D +RAVA + +L EY +PL+R GG+F+AAKG EEV +++
Sbjct: 128 RAEDFARNPLYRETFDCVTSRAVARLPVLLEYAIPLLRTGGVFLAAKGSQVDEEVIEAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A +++GA + ++ R VV K TP+ YPR GTPAK PL
Sbjct: 188 AAEILGAEIKEIRRFSLGEEAEHRAVVVIEKISPTPEAYPRKAGTPAKKPL 238
>gi|431740581|ref|ZP_19529493.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2039]
gi|430602951|gb|ELB40495.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2039]
Length = 237
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q EQ +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMEQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSVPLKIAFPELQITIVDSLNKRITFLSE---LTGLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKITPKKYPRKPGLPNKQPI 236
>gi|373470572|ref|ZP_09561693.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371762218|gb|EHO50766.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 241
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 140/231 (60%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+E+++ + + L++ N+ MNLT++ ++ E +H+ DS+A+ IK+ D
Sbjct: 19 LSDEQKEKLYKFYEILIEKNKVMNLTSITEIREFTFKHLIDSIALEKLIKD-----IDER 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S + D+GTGAG PG+ LAIA P+ K+TL++S+NKR F++ + NV +
Sbjct: 74 EYS---IADLGTGAGFPGIPLAIAFPNLKLTLIDSLNKRIKFIQEVCETLNIKNVTAIHS 130
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +D +RE +D+ V+RAVA + L+EYCLPLV+VGG FV+ K EV ++++
Sbjct: 131 RAEDIARDKKYRESFDICVSRAVANLASLSEYCLPLVKVGGSFVSYKSKGYDVEVNDAKK 190
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+Q++G + E + +G+R + K + T KYPR G P K P+
Sbjct: 191 AIQVLGGETGESVKFELEE-YGERILLYIKKVKSTSGKYPRKAGLPTKEPI 240
>gi|418964447|ref|ZP_13516251.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|383340542|gb|EID18836.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus subsp. whileyi CCUG 39159]
Length = 237
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LTDQQKMQFEHYFELLVEWNEKINLTAITDKKEVYLKHFYDSIA---PILQGRIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR +FL H L NV G
Sbjct: 69 -NQNIKLLDIGAGAGFPSLPMKILYPALDVTIIDSLNKRILFLNHLADELGLENVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+ILAE +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQILAELTIPFLKVGGRLLALKASNAPEELTEAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + ++ Q P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVEK--NIHYQLPNGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|260887476|ref|ZP_05898739.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|330840114|ref|YP_004414694.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|260862763|gb|EEX77263.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|329747878|gb|AEC01235.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
Length = 238
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q E+ +Y +++WN KMNLTA+ + EV +HI DSL + I+
Sbjct: 17 LDAKQIEKFGIYYRLIIEWNAKMNLTAITEPREVAVKHIVDSLTALRGIEE--------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L+L+DVGTGAG PG+ L I PD K+TLL+S+ KR FLE V L + + G
Sbjct: 68 -RDSLRLIDVGTGAGFPGIPLKIVRPDLKLTLLDSLKKRVHFLETVVEALGLEGAECLHG 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + RE++D+A +RAVA + +LAEY LP VR+GG +A KG +EE K +ER
Sbjct: 127 RAEEAARQSALRERFDIAASRAVARLPVLAEYLLPFVRIGGTAIALKGLHSEEEAKEAER 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G ++ V +R +V K R TPK YPR G PAK PL
Sbjct: 187 AVKILGGRAIESIPVALPGLSDKRAVLVIKKERTTPKAYPRKAGKPAKEPL 237
>gi|433447849|ref|ZP_20411225.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus
TNO-09.006]
gi|431999690|gb|ELK20606.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus
TNO-09.006]
Length = 237
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 130/232 (56%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q Q Y L++WN KMNLTA+ D V +H DS I P ++
Sbjct: 16 SLSPQQLTQFETYYQLLVEWNEKMNLTAITDEEGVYLKHFFDS--ITPAFYYDFSQ---- 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+L + DVG GAG P + L I P V++++S+ KR FL H + L V
Sbjct: 70 ----SLSICDVGAGAGFPSIPLKICFPHLHVSIVDSLQKRITFLNHLAAQLGLEGVAFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ S RE +DV +ARAVA + +L+E CLPLV+VGG F+A KG QEE++ +
Sbjct: 126 DRAETFGQK-SVRESFDVVMARAVARLSVLSELCLPLVKVGGTFIAMKGASAQEELEQGK 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++ +R V K R+TPKKYPR PG P K+P+
Sbjct: 185 TAIRVLGGEVAKVEQFLLPIEESERAIVFVEKKRKTPKKYPRKPGVPNKLPI 236
>gi|24380281|ref|NP_722236.1| 16S rRNA methyltransferase GidB [Streptococcus mutans UA159]
gi|397650467|ref|YP_006490994.1| 16S rRNA methyltransferase GidB [Streptococcus mutans GS-5]
gi|449864347|ref|ZP_21778271.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2B]
gi|449870793|ref|ZP_21780839.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 8ID3]
gi|449886530|ref|ZP_21786252.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA41]
gi|449897559|ref|ZP_21790073.1| 16S rRNA methyltransferase GidB [Streptococcus mutans R221]
gi|449903698|ref|ZP_21792268.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M230]
gi|449915837|ref|ZP_21796523.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15JP3]
gi|449974082|ref|ZP_21815104.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11VS1]
gi|449983880|ref|ZP_21818713.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM2]
gi|450038892|ref|ZP_21835928.1| 16S rRNA methyltransferase GidB [Streptococcus mutans T4]
gi|450049819|ref|ZP_21839908.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM1]
gi|450078058|ref|ZP_21850793.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N3209]
gi|450082893|ref|ZP_21852606.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N66]
gi|450116868|ref|ZP_21864710.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST1]
gi|20177893|sp|Q93D95.1|RSMG_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|15625438|gb|AAL04086.1|AF397166_11 GidB [Streptococcus mutans]
gi|24378293|gb|AAN59542.1|AE015017_8 putative glucose-inhibited division protein [Streptococcus mutans
UA159]
gi|392604036|gb|AFM82200.1| 16S rRNA methyltransferase GidB [Streptococcus mutans GS-5]
gi|449155947|gb|EMB59434.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15JP3]
gi|449156017|gb|EMB59502.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 8ID3]
gi|449178758|gb|EMB81001.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11VS1]
gi|449180834|gb|EMB82971.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM2]
gi|449201020|gb|EMC02034.1| 16S rRNA methyltransferase GidB [Streptococcus mutans T4]
gi|449203309|gb|EMC04175.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NFSM1]
gi|449210439|gb|EMC10900.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N3209]
gi|449214081|gb|EMC14392.1| 16S rRNA methyltransferase GidB [Streptococcus mutans N66]
gi|449226642|gb|EMC26151.1| 16S rRNA methyltransferase GidB [Streptococcus mutans ST1]
gi|449254142|gb|EMC52066.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA41]
gi|449260605|gb|EMC58103.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M230]
gi|449261214|gb|EMC58695.1| 16S rRNA methyltransferase GidB [Streptococcus mutans R221]
gi|449264996|gb|EMC62328.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2B]
Length = 237
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEVFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|449880551|ref|ZP_21783895.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA38]
gi|449924364|ref|ZP_21799604.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4SM1]
gi|449162950|gb|EMB66069.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 4SM1]
gi|449252829|gb|EMC50798.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SA38]
Length = 237
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|290579746|ref|YP_003484138.1| glucose-inhibited division protein [Streptococcus mutans NN2025]
gi|449947656|ref|ZP_21807545.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11SSST2]
gi|449970060|ref|ZP_21813597.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2VS1]
gi|449990864|ref|ZP_21821748.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NVAB]
gi|450028653|ref|ZP_21832300.1| 16S rRNA methyltransferase GidB [Streptococcus mutans G123]
gi|450036766|ref|ZP_21835613.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M21]
gi|450059232|ref|ZP_21843407.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML4]
gi|450063600|ref|ZP_21845008.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML5]
gi|450098555|ref|ZP_21858055.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF1]
gi|450107351|ref|ZP_21860980.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF14]
gi|450111144|ref|ZP_21862531.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM6]
gi|450163726|ref|ZP_21880915.1| 16S rRNA methyltransferase GidB [Streptococcus mutans B]
gi|450171022|ref|ZP_21883804.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM4]
gi|254996645|dbj|BAH87246.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
gi|449168386|gb|EMB71207.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11SSST2]
gi|449173677|gb|EMB76230.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2VS1]
gi|449181382|gb|EMB83485.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NVAB]
gi|449193314|gb|EMB94701.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M21]
gi|449195378|gb|EMB96702.1| 16S rRNA methyltransferase GidB [Streptococcus mutans G123]
gi|449203126|gb|EMC04002.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML4]
gi|449204565|gb|EMC05355.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NLML5]
gi|449221473|gb|EMC21247.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF1]
gi|449222046|gb|EMC21787.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SF14]
gi|449224172|gb|EMC23822.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM6]
gi|449242586|gb|EMC41155.1| 16S rRNA methyltransferase GidB [Streptococcus mutans B]
gi|449244675|gb|EMC43041.1| 16S rRNA methyltransferase GidB [Streptococcus mutans SM4]
Length = 237
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|89897799|ref|YP_521286.1| hypothetical protein DSY5053 [Desulfitobacterium hafniense Y51]
gi|219670948|ref|YP_002461383.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
gi|122480419|sp|Q24MA0.1|RSMG_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89337247|dbj|BAE86842.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219541208|gb|ACL22947.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
Length = 239
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 13/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ +Y D L++WN K+NLT++ + E++ +H DSLA++ S
Sbjct: 21 LSGDQIEKFSIYADRLVEWNEKVNLTSITEPEEIILKHFVDSLALL-------------S 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L D+GTGAG PG+ L I P+ +V L++S+ KR FLE + +L VQ V
Sbjct: 68 LVQGKRLADIGTGAGFPGIPLKILLPEVEVYLVDSLAKRLDFLETVIKELKLTKVQTVHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +RE +D +RAVA + +L EY +PL++ GG F+AAKG QEEV S++
Sbjct: 128 RAEDFARDPHYRETFDCVTSRAVARLPVLLEYAVPLLKKGGYFLAAKGSQAQEEVMESKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++GA + + + R ++ K+ TP YPR GTP K PL
Sbjct: 188 ALTVLGAEIKDIKLFNLGAEAEHRAIILVEKTSSTPPAYPRKAGTPGKKPL 238
>gi|418966082|ref|ZP_13517832.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
constellatus subsp. constellatus SK53]
gi|383340840|gb|EID19125.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
constellatus subsp. constellatus SK53]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQQ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LTDRQQMQFERYFELLVEWNKKINLTAITEKKEVYLKHFYDSIA---PILQGRIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR +FL H L V G
Sbjct: 69 -NQNIKLLDIGAGAGFPSLPMKILYPALDVTVIDSLNKRILFLNHLADELDLEKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+ILAE +P ++VGG +A K + EE+ +
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQILAELTIPFLKVGGRLLALKATNAPEELTEAND 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+ + + + S Q P G R + K + TP KYPR G P K PL
Sbjct: 188 ALKLLFSKVKENSSY--QLPNGDPRYITIVDKKKETPNKYPRKAGIPNKRPL 237
>gi|317131000|ref|YP_004097282.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
gi|315475948|gb|ADU32551.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LNT Q +Q H Y + L++WN KMNLTA+ D +V +H DS+++ + Y +
Sbjct: 17 LNTDQLKQFHDYYELLVEWNEKMNLTAITDKEDVYLKHFFDSVSV-----SFYHDFKEQK 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+VDVG GAG P + L I P KVT+++S+NKR FL L V
Sbjct: 72 S-----IVDVGAGAGFPSIPLKICYPHLKVTIVDSLNKRITFLNALAEKLSLKEVSFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK RE YD A+ARAVA + +LAE C+PLV+ G F A KG + E+ ++++
Sbjct: 127 RAEDFGKKKEHRETYDTALARAVARLPVLAELCMPLVKQNGYFYAMKGAGAKGEIVDAKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L+ + +R + K + TPKKYPR PG P K PL
Sbjct: 187 AISTLGGELISEDNFVLPKEESERYIIAIKKLKSTPKKYPRKPGLPNKQPL 237
>gi|449909008|ref|ZP_21794102.1| 16S rRNA methyltransferase GidB [Streptococcus mutans OMZ175]
gi|449261913|gb|EMC59373.1| 16S rRNA methyltransferase GidB [Streptococcus mutans OMZ175]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 TKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|156743304|ref|YP_001433433.1| 16S rRNA methyltransferase GidB [Roseiflexus castenholzii DSM
13941]
gi|189040817|sp|A7NPB9.1|RSMG_ROSCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156234632|gb|ABU59415.1| methyltransferase GidB [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 133/232 (57%), Gaps = 14/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCD-S 117
L+ RQ EQ Y L WN ++NLT++ D E++ RH DSL C S
Sbjct: 15 LDQRQIEQFARYSAELRAWNMRVNLTSITDEREIVTRHFLDSL------------RCALS 62
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++ +L+D+G+GAG PGL L I P+ VTL+ES+ K+ FL+H V++ L +V +V
Sbjct: 63 WGDTPSRLIDIGSGAGFPGLPLKILHPELHVTLVESVGKKAAFLQHIVAVLDLRDVTVVT 122
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE +G+D REQYDV ARAVAE+ L EY LPL R+GG F+A KG +EV +
Sbjct: 123 ARAEVVGRDPQHREQYDVVTARAVAELATLVEYGLPLCRIGGRFLAPKGSAIDDEVVRAR 182
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G ++ + VE RT VV +K TP YPR G PAK P+
Sbjct: 183 IAIARLGGQVIGVEPVEIPG-VELRTLVVIVKVAPTPAAYPRAVGIPAKRPI 233
>gi|450125951|ref|ZP_21867891.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2A]
gi|449231946|gb|EMC31093.1| 16S rRNA methyltransferase GidB [Streptococcus mutans U2A]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|187933315|ref|YP_001887732.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
gi|238691667|sp|B2TRH8.1|RSMG_CLOBB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|187721468|gb|ACD22689.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
Length = 239
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ +Y + L +WN K+NLTA+ + E++++H DS I K +
Sbjct: 18 LSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEEIIKKHFIDS---IKAFKRDEFKEAKT- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PG+ +AI + +VTLL+S+NKR FL L NV +
Sbjct: 74 ------LIDVGTGAGFPGIPVAIMNENIQVTLLDSLNKRVNFLNLVTEKLGLKNVVAIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + RE +D+A +RAVA M +L+E+CLP V++ G F+A KG +EE+K+S++
Sbjct: 128 RAEDGARQKNLRESFDIATSRAVANMSVLSEFCLPYVKINGHFIALKGPAVEEEIKDSDK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G LL +C VE + + VV K + PK YPR G K P+
Sbjct: 188 AITTLGGQLLDICEVEIEDTELKHNLVVVKKIKECPKAYPRKAGNVTKKPI 238
>gi|449937362|ref|ZP_21804510.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2ST1]
gi|450153903|ref|ZP_21877453.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 21]
gi|449164430|gb|EMB67492.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 2ST1]
gi|449238329|gb|EMC37099.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 21]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYV 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|21909776|ref|NP_664044.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS315]
gi|28896531|ref|NP_802881.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SSI-1]
gi|71902936|ref|YP_279739.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS6180]
gi|123640486|sp|Q48V72.1|RSMG_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|342179308|sp|P0DF44.1|RSMG_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|342179309|sp|P0DF45.1|RSMG_STRPQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21903961|gb|AAM78847.1| putative glucose inhibited division protein B [Streptococcus
pyogenes MGAS315]
gi|28811785|dbj|BAC64714.1| putative glucose-inhibited division protein [Streptococcus pyogenes
SSI-1]
gi|71802031|gb|AAX71384.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS6180]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 136/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|402302422|ref|ZP_10821535.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC9]
gi|400380577|gb|EJP33392.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC9]
Length = 244
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q EQ Y + LL WN +MNLTA+ +V +HI DSL ++Y + +
Sbjct: 20 LTNAQLEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSL-------SAYDAPLFAR 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S L+DVGTGAGLPG+ LAI P+ +VTL++++ KR FL + L NV V
Sbjct: 73 AKS---LIDVGTGAGLPGIPLAIYAPEIEVTLMDALQKRVRFLTEVIEQLGLKNVVCVHA 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++R QYD+AV+RAVA + +LAEY LP VRVGG F+A KG EE++
Sbjct: 130 RAEAAARMHTYRAQYDIAVSRAVARLPVLAEYALPFVRVGGTFLALKGRAYAEEMEEGRA 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G + + V R +V K R TP+ YPR GTP K PL
Sbjct: 190 AVEMLGGGGIAVRPVTLPGLDDVRAVLVIEKYRSTPRAYPRREGTPEKSPL 240
>gi|421891719|ref|ZP_16322487.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Streptococcus pyogenes NS88.2]
gi|379982543|emb|CCG26209.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Streptococcus pyogenes NS88.2]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 136/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|423069920|ref|ZP_17058696.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
intermedius F0413]
gi|424788291|ref|ZP_18215050.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius BA1]
gi|355366241|gb|EHG13959.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
intermedius F0413]
gi|422113055|gb|EKU16812.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius BA1]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQQ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LTDRQQMQFERYFELLVEWNKKINLTAITEKKEVYLKHFYDSIA---PILQGRIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR +FL H L V G
Sbjct: 69 -NQNIKLLDIGAGAGFPSLPMKILYPALDVTVIDSLNKRILFLNHLADELDLEKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+ILAE +P ++VGG +A K + EE+ +
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQILAELTIPFLKVGGRLLALKATNAPEELTEANN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + S Q P G R + K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVKENSSY--QLPNGDPRYITIVDKKKETPNKYPRKAGIPNKRPL 237
>gi|347751711|ref|YP_004859276.1| methyltransferase GidB [Bacillus coagulans 36D1]
gi|347584229|gb|AEP00496.1| methyltransferase GidB [Bacillus coagulans 36D1]
Length = 238
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y L+ WN KMNLTA+ + EV +H DSL T+ +
Sbjct: 17 LSEEQKQQFETYYKWLVDWNNKMNLTAITEKGEVYLKHFYDSL----------TAAFFTD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L + DVG GAG PG+ L I P+ ++++++S+ KR FL H L V +
Sbjct: 67 FNGPLHVCDVGAGAGFPGIPLKICFPELRLSIVDSLQKRITFLGHLTEALGLKEVSLFHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET K REQYDV +ARAVA M +L+E CLPLV+ GG F+A K +EE++ +E+
Sbjct: 127 RAETFAKKPEHREQYDVVMARAVARMSVLSELCLPLVKPGGRFIAMKAQHAKEELEKAEK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + +R +V K ++TPKKYPR PGTPAK+PL
Sbjct: 187 AIRLLGGKTENVYHFTLPVEESERNLIVVKKVKKTPKKYPRKPGTPAKLPL 237
>gi|168181108|ref|ZP_02615772.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
gi|182668128|gb|EDT80107.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
Length = 239
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q+ Y + + +WN+K+NLTA+ + +E++++H D + I K+S S
Sbjct: 18 FNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K R T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIMKIDIEDTDLKHNLVIIKKVRETGKRYPRKPGIIKKNPL 238
>gi|449930243|ref|ZP_21801974.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 3SN1]
gi|449940819|ref|ZP_21805228.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11A1]
gi|449152919|gb|EMB56614.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 11A1]
gi|449163719|gb|EMB66812.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 3SN1]
Length = 237
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPYKYPRKAGMPNKKPL 237
>gi|52082646|ref|YP_081437.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319648512|ref|ZP_08002728.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|404491526|ref|YP_006715632.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423680381|ref|ZP_17655220.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis WX-02]
gi|81608802|sp|Q65CN3.1|RSMG_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52005857|gb|AAU25799.1| glucose-inhibited division protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52350547|gb|AAU43181.1| ribosomal RNA small subunit methyltransferase RsmG [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317389591|gb|EFV70402.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|383441487|gb|EID49196.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis WX-02]
Length = 239
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L++ Q EQ Y + L++WN KMNLT++ + EV +H DS+A + + D
Sbjct: 16 SLSSFQLEQFETYYEWLVEWNEKMNLTSITEKKEVYLKHFYDSIAA--------SFYVDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L DVG GAG P L + I P VT+++S+NKR FL +L N
Sbjct: 68 KKMNTL--CDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRIHFLNQLSDALKLENTAFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE YDV ARAVA + +L+E CLPLV+ GLFVA K EE++ +
Sbjct: 126 DRAETFGRSKDHRESYDVVTARAVARLSVLSELCLPLVKKDGLFVALKAASADEEIETGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++ +G + + S + +R +V K +TPKK+PR PGTP K P+
Sbjct: 186 KAIKTLGGKIETVHSFQLPIEESERNIIVIKKQSQTPKKFPRKPGTPNKSPI 237
>gi|425737854|ref|ZP_18856124.1| 16S rRNA methyltransferase GidB [Staphylococcus massiliensis S46]
gi|425481007|gb|EKU48169.1| 16S rRNA methyltransferase GidB [Staphylococcus massiliensis S46]
Length = 240
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q+ Q +Y L++WN K+NLT++ + ++V +H DS+ T+
Sbjct: 17 LNETQKSQFEMYFKMLVEWNEKVNLTSITEEHDVYLKHFYDSI----------TAGFYMD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L DVG GAG P + L I P+ VT+++S+NKR FL + +L V V
Sbjct: 67 LKEPVHLCDVGAGAGFPSIPLKIVFPEIHVTIVDSLNKRIQFLNQLANALELEGVNFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE+ GK +RE +D+ ARAVA + +L+E CLPLV+ GG FV+ K EE++++
Sbjct: 127 RAESFGKG-DYRESFDIVTARAVARLSVLSELCLPLVKKGGQFVSLKSSKGLEELEDARF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + Q+ E G+R ++ K +TPKKYPR PGTP K PL
Sbjct: 186 AIGILGGKVNQIHHFELPEDAGERQMIMIDKRSKTPKKYPRKPGTPNKSPL 236
>gi|422758315|ref|ZP_16812077.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411150|gb|EFY02058.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 237
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+EQ Y L++WN K+NLTA+ + N+V +H DS+A PI + +
Sbjct: 17 LTMKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIA---PILQGFLA----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ +VT+++S+NKR FL H L + G
Sbjct: 69 -NEPIRLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRIAFLTHLAEALALDKLHFFHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FR Q+DV ARAVA M++LAE +P +++GG +A K +E+++++
Sbjct: 128 RAEDFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLKIGGRLIALKAQAADQELEDAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + Q P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFGKV--TTNHHYQLPNGDARYITVVEKKKETPNKYPRKAGFPNKKPL 237
>gi|392429133|ref|YP_006470144.1| glucose-inhibited division protein B [Streptococcus intermedius
JTH08]
gi|419777264|ref|ZP_14303180.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius SK54]
gi|383845084|gb|EID82490.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
intermedius SK54]
gi|391758279|dbj|BAM23896.1| glucose-inhibited division protein B [Streptococcus intermedius
JTH08]
Length = 237
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQQ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LTDRQQMQFERYFELLVEWNKKINLTAITEKKEVYLKHFYDSIA---PILQGRIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR +FL H L V G
Sbjct: 69 -NQNIKLLDIGAGAGFPSLPMKILYPALDVTVIDSLNKRILFLNHLADELDLEKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+ILAE +P ++VGG +A K + EE+ +
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQILAELTIPFLKVGGRLLALKATNAPEELMEANN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + S Q P G R + K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVKENSSY--QLPNGDPRYITIVDKKKETPNKYPRKAGIPNKRPL 237
>gi|325291445|ref|YP_004267626.1| ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
gi|324966846|gb|ADY57625.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
Length = 251
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 12/233 (5%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q +Q + + LL WN +MNLTA+ + +V+ +H DSL IP I++ +
Sbjct: 25 QLDQFWKFGELLLDWNERMNLTAITEPKDVVVKHFLDSLISIPIIRDMEKNEKIMGSGKE 84
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
L L D+GTG G PG+ L IA +TL++S+ KR FL+ + L + RAE
Sbjct: 85 LMLADLGTGGGFPGIPLKIALSHLNITLMDSLLKRLGFLQTVIKELGLRKISTHHARAED 144
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
G D +FR+Q+D+ ARA+A++ +L EY +PL++VGG+ +AAKG DP+EE+ S RA++
Sbjct: 145 AGHDPAFRQQFDIVTARALADLPVLLEYTVPLLKVGGVLLAAKGKDPEEEISRSNRALKE 204
Query: 243 MGASLLQLCSVES--QSPFGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ C+VE Q G+ R+ ++ K T +KYPR GTP K+PL
Sbjct: 205 LN------CTVERIHQYHLGEAAEYRSLIIVRKIGITSEKYPRKAGTPKKIPL 251
>gi|161508052|ref|YP_001578019.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DPC 4571]
gi|172048356|sp|A8YXD7.1|RSMG_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160349041|gb|ABX27715.1| Glucose inhibited division protein B [Lactobacillus helveticus DPC
4571]
Length = 240
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 8/237 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q+EQ LY L++ N +NLT + + NEV +H DS+ + + +
Sbjct: 11 SKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFK 70
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
L DVG GAG P + L I P KVT+++S+ KR FL+ ++ L N
Sbjct: 71 DGA--------TLCDVGAGAGFPSIPLKILKPSLKVTIVDSLAKRLTFLKDLIAKLGLDN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA+M +L+EYCLPLV+ G FVA KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKKDGYFVALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++A+ ++G L++ + +RT V+ K + T KKYPR GTP + P+
Sbjct: 183 LDEGKKALAVLGGKLIKDEELTLPGTTEERTLVLVKKVKETSKKYPRQAGTPRRKPI 239
>gi|222152196|ref|YP_002561356.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
gi|254766896|sp|B9E8Z2.1|RSMG_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222121325|dbj|BAH18660.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
Length = 238
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 129/231 (55%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L QQ+Q +Y + L++WN K+NLTAV + EV +H DS I P + S
Sbjct: 17 LTDEQQKQFAIYYETLVEWNEKINLTAVTEKEEVYLKHFFDS--ITPSFYFDFNK-VKSI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG GAG P + L I P ++T+++S+NKR FL H + L N V
Sbjct: 74 C-------DVGAGAGFPSIPLKILYPHLEITIVDSLNKRINFLNHLSAELNLTNCHFVHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK +RE +DV ARAVA + +L+E CLPLV+ GG F+A KG + EV+
Sbjct: 127 RAETFGKG-EYRESFDVVTARAVARLSVLSELCLPLVKKGGHFIALKGAQGEIEVEEGLF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++++ + R + K R+TPKKYPR PGTP K PL
Sbjct: 186 AISILGGAVVENHPLTLPEEESMRYILDIEKKRQTPKKYPRKPGTPNKEPL 236
>gi|283797200|ref|ZP_06346353.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
gi|291075161|gb|EFE12525.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
Length = 242
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 9/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q EQ Y + L +WN+ MNLTA+ +++EV+ +H DSLA+ + D
Sbjct: 19 TLTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAV--------DG 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ DVGTGAG PG+ L IA P +VTLL+S+NKR FL +S L + V
Sbjct: 71 LETEAFSVADVGTGAGFPGIPLKIAFPGLRVTLLDSLNKRVKFLNTVISELGLEGITAVH 130
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ RE +D+ V+RAVA + L+EYC+PLV+ GG FV+ K EE+ N +
Sbjct: 131 GRAEDFGRNRVSRETFDICVSRAVANLSTLSEYCMPLVKPGGYFVSYKSGKLDEELVNGQ 190
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + ++ S +RT V K + T +YPR G P+K PL
Sbjct: 191 GAISKLGGEIEKIERF-SLPNSDERTLVKVKKIKATSSRYPRKAGMPSKEPL 241
>gi|387785426|ref|YP_006250522.1| 16S rRNA methyltransferase GidB [Streptococcus mutans LJ23]
gi|449964033|ref|ZP_21811118.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15VF2]
gi|450071051|ref|ZP_21847947.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M2A]
gi|450181625|ref|ZP_21887945.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 24]
gi|379131827|dbj|BAL68579.1| 16S rRNA methyltransferase GidB [Streptococcus mutans LJ23]
gi|449172859|gb|EMB75467.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 15VF2]
gi|449212897|gb|EMC13246.1| 16S rRNA methyltransferase GidB [Streptococcus mutans M2A]
gi|449246037|gb|EMC44353.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 24]
Length = 237
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHNINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYV 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|295094322|emb|CBK83413.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus sp. ART55/1]
Length = 235
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 138/231 (59%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ Y D L++WN+ MNLTA+ + +V+ +H DSL + + + D
Sbjct: 15 LSDKQIEQFSKYYDILVEWNKVMNLTAITEKEDVIIKHFADSLLL--------SKYKD-- 64
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ N+ ++DVGTGAG PG+ L IA P+ +TL++S+NKR FL+ + L ++ V
Sbjct: 65 LHENIDVIDVGTGAGFPGIPLKIAFPELNITLMDSLNKRLKFLDEVIDELGLQDIHTVHS 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D RE+YD+AV+RAVA + L+E+C+P V+ GG FV+ K + EE+++ ++
Sbjct: 125 RAEDGGRDEMHREKYDLAVSRAVANLATLSEWCIPFVKPGGYFVSYKSNALPEEMRDGKK 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + + + QR+ V K T KYPR G AK P+
Sbjct: 185 AIRILGGQVENIFNTNIPETNNQRSFVFVKKIANTDNKYPRKAGA-AKKPI 234
>gi|209558836|ref|YP_002285308.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes NZ131]
gi|238058259|sp|B5XJV1.1|RSMG_STRPZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209540037|gb|ACI60613.1| Methyltransferase gidB [Streptococcus pyogenes NZ131]
Length = 237
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 136/233 (58%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPYKYPRKAGLPNKKPL 237
>gi|295090266|emb|CBK76373.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium cf.
saccharolyticum K10]
Length = 242
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 9/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q EQ Y + L +WN+ MNLTA+ +++EV+ +H DSLA+ + D
Sbjct: 19 TLTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAV--------DG 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ DVGTGAG PG+ L IA P +VTLL+S+NKR FL +S L + V
Sbjct: 71 LETEAFSVADVGTGAGFPGIPLKIAFPGLRVTLLDSLNKRVKFLNTVISELGLEGITAVH 130
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ RE +D+ V+RAVA + L+EYC+PLV+ GG FV+ K EE+ N +
Sbjct: 131 GRAEDFGRNRVSRETFDICVSRAVANLSTLSEYCMPLVKPGGYFVSYKSGKLDEELVNGQ 190
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + ++ S +RT V K + T +YPR G P+K PL
Sbjct: 191 GAISRLGGEIEKIERF-SLPNSDERTLVKVKKIKATSSRYPRKAGMPSKEPL 241
>gi|383479464|ref|YP_005388358.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS15252]
gi|383493388|ref|YP_005411064.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS1882]
gi|386362142|ref|YP_006071473.1| methyltransferase GidB [Streptococcus pyogenes Alab49]
gi|166224620|sp|Q1JII3.1|RSMG_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94543292|gb|ABF33340.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10270]
gi|350276551|gb|AEQ23919.1| methyltransferase GidB [Streptococcus pyogenes Alab49]
gi|378927454|gb|AFC65660.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS15252]
gi|378929116|gb|AFC67533.1| 16S rRNA methyltransferase/glucose-inhibited division protein (B)
GidB [Streptococcus pyogenes MGAS1882]
Length = 237
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 17 LSSKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIA---PILQGFLA----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV G
Sbjct: 69 -NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 128 RAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 188 ALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|450089341|ref|ZP_21855158.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NV1996]
gi|449215679|gb|EMC15859.1| 16S rRNA methyltransferase GidB [Streptococcus mutans NV1996]
Length = 237
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPYKYPRKAGMPNKKPL 237
>gi|308175807|ref|YP_003922512.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|384161695|ref|YP_005543768.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|384166617|ref|YP_005547996.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
gi|384170808|ref|YP_005552186.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens XH7]
gi|307608671|emb|CBI45042.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|328555783|gb|AEB26275.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|328914172|gb|AEB65768.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
gi|341830087|gb|AEK91338.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens XH7]
Length = 239
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY L++WN KMNLT++ + EV +H DS+ T+
Sbjct: 16 SLSDRQLEQFELYYQMLVEWNEKMNLTSITEKKEVYLKHFYDSI----------TAAFYI 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P L + I P VT+++S+NKR FLE+ QL + V
Sbjct: 66 DFEKVTTLCDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLENLADALQLEHTTFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +D+ ARAVA + +L+E CLPLV+ G+F A K EE+K +
Sbjct: 126 DRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLVKKNGVFAALKAAAADEELKAGQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G L Q+ S +R ++ K + TPKKYPR PGTP K P+
Sbjct: 186 KAIKVLGGELEQVHSFTLPVEESERNIMLIRKMKSTPKKYPRKPGTPNKSPI 237
>gi|226951093|ref|YP_002806184.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A2 str.
Kyoto]
gi|254766887|sp|C1FP29.1|RSMG_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226842347|gb|ACO85013.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
Length = 239
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q+ Y + + +WN+K+NLTA+ + +E++++H D + I K+S S
Sbjct: 18 FNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K R T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIMKIDIEDTDLKHNLVIIKKLRETGKRYPRKPGIIKKNPL 238
>gi|430751872|ref|YP_007214780.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Thermobacillus
composti KWC4]
gi|430735837|gb|AGA59782.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Thermobacillus
composti KWC4]
Length = 239
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 126/233 (54%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L + E+ Y L++WN +MNLTA+ + V E+H DSL + H D
Sbjct: 18 LTPERSERFETYFRLLVEWNERMNLTAITEREAVYEKHFYDSLTL--------AFHLD-- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N KL D+G+GAG P L L I P V +++S+ KR FLEH + L V +
Sbjct: 68 LNGTGKLADIGSGAGFPSLPLKICFPHLDVLIVDSLGKRIRFLEHLTAELGLAGVTCLHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + R+ YD+ ARAVA M +LAE+CLP R G F A KG DP EE+ S+R
Sbjct: 128 RAEDAARMPEHRDGYDLVTARAVARMNVLAEFCLPFARPDGRFAAMKGSDPAEEIAESKR 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L + ++ Q PF Q R V+ KS RTP +YPR G PAK P+
Sbjct: 188 ALSELGGKLETVHAL--QLPFEQADRHIVIIRKSGRTPARYPRKAGIPAKQPI 238
>gi|335031906|ref|ZP_08525322.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
anginosus SK52 = DSM 20563]
gi|333768441|gb|EGL45628.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
anginosus SK52 = DSM 20563]
Length = 237
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ D EV +H DS A PI
Sbjct: 17 LTDRQKQQFEHYFELLVEWNEKINLTAITDKKEVYLKHFYDSSA---PILQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P V +++S+NKR +FL H L NV G
Sbjct: 69 -NKNIKLLDIGAGAGFPSLPMKILYPALDVMIIDSLNKRILFLNHLADELGLENVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+ILAE +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQILAELTIPFLKVGGRLLALKASNAPEELTEAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++ + + + ++ Q P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSILFSKVEK--NIHYQLPNGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|450145270|ref|ZP_21874483.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1ID3]
gi|449149558|gb|EMB53354.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 1ID3]
Length = 237
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHNINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K PL
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKPL 237
>gi|333398337|ref|ZP_08480150.1| 16S rRNA methyltransferase GidB [Leuconostoc gelidum KCTC 3527]
gi|406600538|ref|YP_006745884.1| 16S rRNA methyltransferase GidB [Leuconostoc gelidum JB7]
gi|406372073|gb|AFS40998.1| 16S rRNA methyltransferase GidB [Leuconostoc gelidum JB7]
Length = 239
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q +Q Y + L+ N +NLTA+ + N+V +H DSL I + Y +
Sbjct: 16 TLTKHQIQQFEDYFNMLIATNEHVNLTAITEKNDVYLKHFYDSLTI-----SFYEQDLQT 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + L+D+GTGAG P L L I P K+T+++S+ KR FL+ V+ L V+I+
Sbjct: 71 AEKT---LIDIGTGAGFPSLPLKIVFPQLKITMVDSLQKRINFLQEVVTTLDLSGVEIIH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G+++ +RE +D A ARAVA +LAEY LP V+ GG F+ KG Q+E+ + +
Sbjct: 128 GRAEDIGQNLRYREAFDYATARAVARTSVLAEYTLPFVKKGGKFIVMKGAAAQQELADGK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L E P G R + K+++TPK+YPR GTP+K P+
Sbjct: 188 QALATLGGVLHD--EFEFSLPNGDVRYIQIVNKNKKTPKQYPRQAGTPSKKPI 238
>gi|422420573|ref|ZP_16497526.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
gi|313640182|gb|EFS04772.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
Length = 238
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ Q +Q H Y + L++WN KMNLTA+ + EV +H DS++ + N + S CD
Sbjct: 17 LSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSICD- 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
VG GAG P + + I P +V++++ KR FL+ L NV
Sbjct: 76 ----------VGAGAGFPSIPIKICFPHLEVSIVDXXXKRMTFLDALAEKLALTNVHFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ + RE+YD+ ARAVA M +L+E CLPLV+ GG F+ K ++E++ +E
Sbjct: 126 DRAETFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKKGGSFLVMKAAQAEQELQTAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ S +R V K++ TP KYPR PGTP K+P+
Sbjct: 186 KAIKVLGGKVVNHFSFSLPIEESERNIYVISKTKETPNKYPRKPGTPNKLPI 237
>gi|94993669|ref|YP_601767.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10750]
gi|166224621|sp|Q1J8D8.1|RSMG_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94547177|gb|ABF37223.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10750]
Length = 237
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L ++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLASKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++GG +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|295697830|ref|YP_003591068.1| methyltransferase GidB [Kyrpidia tusciae DSM 2912]
gi|295413432|gb|ADG07924.1| methyltransferase GidB [Kyrpidia tusciae DSM 2912]
Length = 245
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 134/233 (57%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAII--PPIKNSYTSHCD 116
L T + +Y L++ NR++NLTAV D V +H DSL ++ P + +
Sbjct: 24 LETEVWRGLEVYERRLVERNREVNLTAVTDAEGVYWKHFYDSLVVLGLPEVPQAGF---- 79
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
LVDVG+GAG PGLVLA+A P + V+LL+++ KR FLE L V++V
Sbjct: 80 --------LVDVGSGAGFPGLVLAVARPGFSVSLLDALRKRVWFLEEVRGELGLTRVRVV 131
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE G+ +RE +D+A ARAVA+M +LAE LP VRVGG+ +A KG D +EE++ +
Sbjct: 132 HGRAEEYGRRPGWRESFDMATARAVAQMSVLAELLLPFVRVGGMAMAWKGPDVEEELEGA 191
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + + E G R+ V+ K TP +YPR PG P K PL
Sbjct: 192 RGAIRRLGGEVEAVHRYELPYGMGGRSVVIVRKISATPTEYPRRPGVPEKRPL 244
>gi|322517440|ref|ZP_08070313.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
gi|322123922|gb|EFX95481.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
Length = 237
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CP+ VT+++S+NKR FL L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELDLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ N++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELANAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--SVLNENYKLPNGDGRNITIVNKKKETPNKYPRRAGMPNKKPL 237
>gi|296111116|ref|YP_003621497.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|339491666|ref|YP_004706171.1| 16S rRNA methyltransferase GidB [Leuconostoc sp. C2]
gi|295832647|gb|ADG40528.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|338853338|gb|AEJ31548.1| 16S rRNA methyltransferase GidB [Leuconostoc sp. C2]
Length = 239
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 137/233 (58%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q Q Y + L+ N ++NLTA+ + ++V +H DSL ++ Y
Sbjct: 16 TLTDQQIRQFEQYFNLLVARNEQVNLTAITEKDDVYLKHFYDSLTVL-----FYEKKLKV 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+D+GTGAG P L L I PD ++T+++S+ KR FL+ V+ L +V+IV
Sbjct: 71 PGKT---LIDIGTGAGFPSLPLKIVLPDLQITMVDSLQKRVNFLQEVVTELGLSHVEIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G+ +REQ+D A ARAVA +LAEY LP V++GG F+ KG Q+E+ + +
Sbjct: 128 GRAEDIGQKPKYREQFDYATARAVARTSVLAEYTLPFVKIGGQFLVMKGSAAQQELVDGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G +L E P G R+ + K+++TPK+YPR GTP + P+
Sbjct: 188 KALVTLGGTL--QSDFEFTLPNGDTRSIQIVDKTKKTPKQYPRQAGTPNRKPI 238
>gi|138897065|ref|YP_001127518.1| 16S rRNA methyltransferase GidB [Geobacillus thermodenitrificans
NG80-2]
gi|196249886|ref|ZP_03148582.1| methyltransferase GidB [Geobacillus sp. G11MC16]
gi|166224591|sp|A4ITW9.1|RSMG_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134268578|gb|ABO68773.1| Glucose inhibited division protein B [Geobacillus
thermodenitrificans NG80-2]
gi|196210762|gb|EDY05525.1| methyltransferase GidB [Geobacillus sp. G11MC16]
Length = 238
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 134/235 (57%), Gaps = 16/235 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++ Q Y + L++WN KMNLTA+ D V +H DS++ P ++
Sbjct: 16 SLSSQALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVS--PAFYYDFSE---- 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P + L I P +V++++S+ KR FL+H V L ++ +
Sbjct: 70 ----PFSLCDVGAGAGFPSIPLKICFPHLRVSIVDSLQKRIRFLQHLVGELGLKDIALYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET + RE +DV ARAVA M +LAE CLPL +VGG F+A K EE+K E
Sbjct: 126 DRAETFARQKGMRESFDVVTARAVARMPVLAELCLPLTKVGGTFLAMKAASAPEELKEGE 185
Query: 238 RAVQLMGASLLQLCSVES-QSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G ++ + E+ PF G+RT + K+++TP +YPR PGTP K P+
Sbjct: 186 KAIAVLGG---EVTATETFMLPFEEGERTIIFVQKTKKTPARYPRKPGTPNKQPI 237
>gi|333447805|ref|ZP_08482747.1| 16S rRNA methyltransferase GidB [Leuconostoc inhae KCTC 3774]
Length = 238
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 132/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q +Q Y D L+ N +NLTA+ + N+V +H DSL + + Y +
Sbjct: 16 TLTKHQIQQFEDYFDMLIATNEHVNLTAITEKNDVYLKHFYDSLTV-----SFYEQDLQT 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ + L+D+GTGAG P L L I P K+T+++S+ KR FL+ V+ L V+I+
Sbjct: 71 AEKT---LIDIGTGAGFPSLPLKIVFPQLKITMVDSLQKRINFLQEVVTTLDLSGVEIIH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G+++ +RE +D A ARAVA +LAEY LP V+ GG F+ KG Q+E+ + +
Sbjct: 128 GRAEDIGQNLRYREAFDYATARAVARTSVLAEYTLPFVKKGGKFIVMKGAAAQQELADGK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L E P G + + +TPK+YPR GTP+K P+
Sbjct: 188 QALATLGGVLHD--EFEFSLPNGDVRYIQIVNKIKTPKQYPRQAGTPSKKPI 237
>gi|168183719|ref|ZP_02618383.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|237797098|ref|YP_002864650.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
gi|259495491|sp|C3KWJ3.1|RSMG_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|182673204|gb|EDT85165.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|229261829|gb|ACQ52862.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
Length = 239
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y + + +WN+K+NLTA+ + E++++H D + I K+S S
Sbjct: 18 FNDKKYNQFISYKNLIQEWNKKINLTAIVEDEEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K R T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIMKIDIEDTDLKHNLVIIKKVRETGKRYPRKPGIIKKNPL 238
>gi|315223095|ref|ZP_07864963.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
gi|315187784|gb|EFU21531.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
Length = 238
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN +NLTA+ D EV +H DS+A PI
Sbjct: 18 LTDRQKQQFERYFELLVEWNENINLTAITDKKEVYLKHFYDSIA---PILQGLID----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR +FL H L V G
Sbjct: 70 -NKGIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRILFLNHLADELGLEKVHFYHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+DV ARAVA M++LAE +P ++VGG +A K + EE+ ++
Sbjct: 129 RAEDFAQDKDFRAQFDVVTARAVARMQVLAELTIPFLKVGGRLLALKASNAPEELTEAKT 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + ++ Q P G R V K + TP KYPR G P K PL
Sbjct: 189 ALSLLFSKVEE--NIHYQLPNGDPRYITVVGKKKETPNKYPRKAGMPNKRPL 238
>gi|393198838|ref|YP_006460680.1| S-adenosylmethionine-dependent methyltransferase [Solibacillus
silvestris StLB046]
gi|327438169|dbj|BAK14534.1| predicted S-adenosylmethionine-dependent methyltransferase
[Solibacillus silvestris StLB046]
Length = 238
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y + L++WN KMNLTA+ D+ V +H DS+ S + + D +
Sbjct: 17 LSEHQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFYDSI--------SASFYFDFT 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + + I P ++T+++S+NKR FL H + L ++ V
Sbjct: 69 KVTTV--CDVGAGAGFPSIPIKICFPHLQITIVDSLNKRITFLNHLTNELNLDHMTFVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ ++RE++DV ARAVA + +L+E C+PL + GG FVA K EE+K++ +
Sbjct: 127 RAEEFGQNAAYREKFDVVTARAVARLSVLSELCIPLAKEGGYFVALKAAAGAEELKDATK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L++ + +R+ V K + TPKKYPR PG P K P+
Sbjct: 187 AISTLGGKLIEEFAFHLPVEESERSLYVFDKVKSTPKKYPRKPGVPNKTPI 237
>gi|299541772|ref|ZP_07052095.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|424740053|ref|ZP_18168463.1| methyltransferase gidB [Lysinibacillus fusiformis ZB2]
gi|298725510|gb|EFI66151.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|422946276|gb|EKU40689.1| methyltransferase gidB [Lysinibacillus fusiformis ZB2]
Length = 238
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y + L++WN KMNLTA+ D+ V +H DS+ S + + D S
Sbjct: 17 LSDIQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSI--------SPSFYFDFS 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + + I P +VT+++S+NKR FL H QL N+ V
Sbjct: 69 --KVITVCDVGAGAGFPSIPIKICFPHLQVTIVDSLNKRITFLNHLSDELQLENMHFVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+++ +REQ+DV ARAVA + +LAE C+PL + G FVA K EE+K++++
Sbjct: 127 RAEEFGQNLKYREQFDVVTARAVARLSVLAELCVPLAKQEGYFVALKAAAGAEELKDAKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L + S + +R + K + TPKKYPR PG P K P+
Sbjct: 187 ALTTLGVKLREEFSFKLPVEESERILYIFDKIKGTPKKYPRKPGVPNKTPI 237
>gi|421839553|ref|ZP_16273098.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001627]
gi|409734074|gb|EKN35911.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001627]
Length = 239
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q+ Y + + +WN+K+NLTA+ + +E++++H D + I K+S S
Sbjct: 18 FNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIMKIDIEDTDLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|406667888|ref|ZP_11075639.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
isronensis B3W22]
gi|405384295|gb|EKB43743.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
isronensis B3W22]
Length = 238
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y + L++WN KMNLTA+ D+ V +H DS+ S + + D +
Sbjct: 17 LSEHQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFYDSI--------SASFYFDFT 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + + I P ++T+++S+NKR FL H + L ++ V
Sbjct: 69 KVTTV--CDVGAGAGFPSIPIKICFPHLQITIVDSLNKRITFLNHLTNELNLDHMTFVHA 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ ++RE++DV ARAVA + +L+E C+PL + GG FVA K EE+K++ +
Sbjct: 127 RAEEFGQNTAYREKFDVVTARAVARLSVLSELCIPLAKEGGYFVALKAAAGAEELKDATK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L++ + +R+ V K + TPKKYPR PG P K P+
Sbjct: 187 AISTLGGKLIEEFAFHLPVEESERSLYVFDKVKSTPKKYPRKPGVPNKTPI 237
>gi|297585586|ref|YP_003701366.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
gi|297144043|gb|ADI00801.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
Length = 237
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q Y L+ WN +MNLTA+ D +V +H DS+ + S +
Sbjct: 17 LTDEQMRQFDAYYHLLVDWNTRMNLTAITDKEDVYLKHFYDSITACEFVDFSKAT----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+VDVG GAG P + + I P +VT+++S+NKR FL L VQ +
Sbjct: 72 -----SVVDVGAGAGFPSIPIKIVFPHLEVTIIDSLNKRITFLHALSDALSLSGVQAIHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ +R+++D+A++RAVA M +L E C+P V+ GG+F+A KG EE+ S++
Sbjct: 127 RAEEAGRMSEYRDRFDLAISRAVARMPVLTELCMPFVKSGGIFLAMKGSQGMEELAESKK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+Q +G L Q + G R ++ K TPKKYPR PGTP K P+
Sbjct: 187 AIQALGGKLKQSFTFALPGDDGDRVMLLIDKISNTPKKYPRKPGTPNKEPI 237
>gi|338811370|ref|ZP_08623588.1| methyltransferase GidB [Acetonema longum DSM 6540]
gi|337276660|gb|EGO65079.1| methyltransferase GidB [Acetonema longum DSM 6540]
Length = 238
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L T Q E +Y L++WN KMNLTA+++ EV +H+ DSL P + +
Sbjct: 18 LATGQLEAFTMYYQLLIEWNEKMNLTAIREPEEVAVKHMVDSLTCYDP------KYFPTG 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C +++DVGTGAG PGL L I PD K+TLL+S+NKR +FL+ V L V
Sbjct: 72 C----RVMDVGTGAGFPGLPLKIFRPDIKLTLLDSLNKRLLFLQEVVQRLDLTGTVTVHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +REQ+DVA++RAVA + +L E CLP V+ GG F+A KG Q+E + +
Sbjct: 128 RAEEGARQPKYREQFDVALSRAVARLNVLTELCLPYVKTGGHFIALKGAQYQQETEEAAA 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L + V R + K + T YPR PG P K PL
Sbjct: 188 AIRVLGGRLAETRPVTLPGLPDSRAVIYIKKIKPTVAAYPRRPGQPEKKPL 238
>gi|304405896|ref|ZP_07387554.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
gi|304345139|gb|EFM10975.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 132/235 (56%), Gaps = 16/235 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q +Q Y L++WN KMNLT + + V E+H DS+A+ + H
Sbjct: 18 TLTAEQLDQFEAYFRILVEWNEKMNLTGITEREAVYEKHFYDSVALSFYVDMKNVRH--- 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ D+G+GAG P L + I P K+T+++S+NKR FL+H V+ L +V V
Sbjct: 75 -------IADIGSGAGFPSLPIKICFPHLKITIVDSLNKRISFLQHVVNELGLSDVSCVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + + R+ YD+ ARAVA++ +L E+CLP VR GG F A KG DP +E++ +
Sbjct: 128 GRAEDIARLPEHRDHYDLVTARAVAKLNVLNEFCLPFVRKGGTFAAMKGGDPTDEIREAS 187
Query: 238 RAVQLMGASLLQLCSVES-QSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++ + + E+ Q PF Q R V+ K+ TP+KYPR GTP K P+
Sbjct: 188 TSLRELKG---KTAGTEAMQLPFEQSERHIVLITKTDSTPRKYPRKAGTPLKQPI 239
>gi|408411192|ref|ZP_11182368.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
66c]
gi|409350898|ref|ZP_11233848.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
equicursoris CIP 110162]
gi|407874646|emb|CCK84174.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus sp.
66c]
gi|407877107|emb|CCK85906.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
equicursoris CIP 110162]
Length = 239
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 139/236 (58%), Gaps = 18/236 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHC 115
L++RQ++Q Y L++ N +NLT + D +EV +H DS L ++P + S C
Sbjct: 17 LSSRQEQQFKTYFKELVRVNEYVNLTRITDEDEVYLKHFYDSITPLLLVPEVFTEGASLC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D VG GAG P L + I PD +VT+++S+ KR FL+ + + V +
Sbjct: 77 D-----------VGAGAGFPSLPIKILRPDLEVTIVDSLGKRLTFLKDLMEKLDITGVNL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE +G++ +RE +D+ ARAVA M +L+EYCLPL +VGG FVA KG + E+ +
Sbjct: 126 VHGRAEDVGQNPEYREHFDLVTARAVARMSVLSEYCLPLAKVGGKFVALKGPKAESELDD 185
Query: 236 SERAVQLMGA--SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++A+ +G +L++ ++ S +RT +V K + TPKKYPR GTP + PL
Sbjct: 186 AKKALATLGGKTALVKEFTLPKSSE--ERTIIVTDKVQATPKKYPRQAGTPNRKPL 239
>gi|395244550|ref|ZP_10421514.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
hominis CRBIP 24.179]
gi|394483197|emb|CCI82522.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
hominis CRBIP 24.179]
Length = 239
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 135/234 (57%), Gaps = 14/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHC 115
L+ +Q++Q +Y L+Q N K+NLT + D +EV +H DS L P + + S C
Sbjct: 17 LSLQQKQQFAIYYQDLIQVNEKVNLTRITDEDEVYLKHFYDSVTPLFTFPEVFKTDASLC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D VG GAG P L + I PD KVT+++S+ KR FL+ + L N+ +
Sbjct: 77 D-----------VGAGAGFPSLPIKILRPDLKVTIIDSLGKRLKFLDSLIQKLNLENITL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V RAE G++ + R ++D+ ARAVA+M +L+EYCLPL ++GG VA KG EE+ +
Sbjct: 126 VHSRAEDAGQNPALRAKFDIVTARAVAKMSVLSEYCLPLAKIGGDLVALKGPKANEELTD 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A++++G ++ + + +R V+ K +TPKKYPR GTP + PL
Sbjct: 186 AKDAIKILGGKTKKIVELALPNTDDERNLVLIEKVAKTPKKYPRQAGTPNRKPL 239
>gi|153811975|ref|ZP_01964643.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
gi|149831874|gb|EDM86960.1| 16S rRNA methyltransferase GidB [Ruminococcus obeum ATCC 29174]
Length = 200
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 10/209 (4%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLT + + EV+ +H DSLA + + + S K++D+GTGAG PG+ L
Sbjct: 1 MNLTGITEFQEVLVKHFLDSLACVKAVDMTKVS----------KIMDIGTGAGFPGVPLK 50
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IA P + LL+S+ KR FLE +L +L N+ + GRAE K+ ++REQYD+ V+RA
Sbjct: 51 IAFPHLEACLLDSLKKRVNFLEETFALLKLENITAIHGRAEEFAKNKAYREQYDLCVSRA 110
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
V+ + L+EYCLP V+VGG F++ K QEE++ +E+AV+++G + +
Sbjct: 111 VSNLATLSEYCLPYVKVGGNFISYKSGTVQEELQQAEKAVKILGGKIQDVVYFNLPDSEI 170
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
QR+ VV K + TP +YPR GTP K PL
Sbjct: 171 QRSLVVIEKMKPTPGRYPRKAGTPLKEPL 199
>gi|416348337|ref|ZP_11680289.1| 16S rRNA methyltransferase GidB [Clostridium botulinum C str.
Stockholm]
gi|338196903|gb|EGO89080.1| 16S rRNA methyltransferase GidB [Clostridium botulinum C str.
Stockholm]
Length = 243
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 135/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y D L WN K+NLTA+ + E++++H DS+ I + Y +
Sbjct: 22 FNDKKYNQFIKYKDLLKDWNSKVNLTAITEDEEIIKKHFIDSMKIF---QFEYLKKAN-- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+++D+GTG G PG+ + I P+ K+ LL+S+ KR L+ + + +V+ + G
Sbjct: 77 -----RIIDIGTGGGFPGIPMKIIRPEVKMVLLDSLRKRINVLDDILCKIGIDDVETIHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ +REQ+D V+RAVA + L+E+CLP V+VGG FVA KG EEVK +++
Sbjct: 132 RAEEFSRNPKYREQFDAVVSRAVANLAALSEFCLPYVKVGGYFVALKGPSVDEEVKIAKK 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ VE ++ + V+ K + TPK+YPR GT K PL
Sbjct: 192 AISILGGKLEEIREVEIENSDLKHNLVIIKKIKNTPKQYPRKAGTAIKKPL 242
>gi|253681207|ref|ZP_04862005.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
gi|253562445|gb|EES91896.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
Length = 243
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 135/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y D L WN K+NLTA+ + E++++H DS+ I + Y +
Sbjct: 22 FNDKKYNQFIKYKDLLKDWNSKVNLTAITEDKEIIKKHFIDSMKIF---QFEYLKKAN-- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+++D+GTG G PG+ + I P+ K+ LL+S+ KR L+ + + +V+ + G
Sbjct: 77 -----RIIDIGTGGGFPGIPMKIIRPEVKMVLLDSLRKRINVLDDILCKIGIDDVETIHG 131
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ +REQ+D V+RAVA + L+E+CLP V+VGG FVA KG EEVK +++
Sbjct: 132 RAEEFSRNPKYREQFDAVVSRAVANLAALSEFCLPYVKVGGYFVALKGPSVDEEVKIAKK 191
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ VE ++ + V+ K + TPK+YPR GT K PL
Sbjct: 192 AISILGGKLEEIREVEIENSDLKHNLVIIKKIKNTPKQYPRKAGTAIKKPL 242
>gi|167041017|ref|YP_001664002.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300913772|ref|ZP_07131089.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307725542|ref|YP_003905293.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
gi|193806453|sp|B0K5N2.1|RSMG_THEPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166855257|gb|ABY93666.1| methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300890457|gb|EFK85602.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307582603|gb|ADN56002.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
Length = 240
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 132/227 (58%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E Y LL+WN+KMNLTA+ + +EV+ +H DSL+++ K
Sbjct: 26 EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVK----------SGKIKEEEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL+S KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D++VARAVA + IL EY LP V+V G F+A KG + +EE++NS+RA++ +
Sbjct: 136 KDIKYREQFDLSVARAVAPLNILLEYTLPFVKVDGYFIALKGREIEEEIENSQRALKELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ + + P+ V+ K P KYPR + PL
Sbjct: 196 GEIEEVKEI--KLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL 240
>gi|15616622|ref|NP_244928.1| 16S rRNA methyltransferase GidB [Bacillus halodurans C-125]
gi|11132401|sp|Q9K5M8.1|RSMG_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|10176685|dbj|BAB07779.1| glucose-inhibited division protein [Bacillus halodurans C-125]
Length = 238
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 125/232 (53%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q +Q Y L++WN KMNLTA+ D V +H DSL T+
Sbjct: 16 SLSQAQLDQFEHYYHTLVEWNEKMNLTAITDKEGVYLKHFYDSL----------TAAFYV 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+VDVG GAG P + L I P+ +VT+++S+ KR FLEH L
Sbjct: 66 DFTKVATVVDVGAGAGFPSIPLKIVFPELRVTIVDSLKKRIGFLEHLSETLGLKGTAFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET + REQYD+ +ARAVA + +L+E CLPL +V G FVA KG EE+ ++
Sbjct: 126 DRAETFAQKKEHREQYDLVLARAVARLPVLSELCLPLAKVEGTFVAMKGAGANEELTAAQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G S++Q +R ++ K R TPKKYPR PGTP K PL
Sbjct: 186 GALKKLGGSVIQNEQFTLPIEESERHVIIIRKERSTPKKYPRKPGTPNKQPL 237
>gi|435855273|ref|YP_007316592.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Halobacteroides halobius DSM 5150]
gi|433671684|gb|AGB42499.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Halobacteroides halobius DSM 5150]
Length = 239
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q EQ Y+ L +WN+K+NLTA+ E++ +H DSL+ + I +
Sbjct: 19 LNQSQVEQFLNYMQVLRKWNKKINLTALDKPEEIIVKHFLDSLSCVKGI----------N 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++DVGTGAG P L L I PD +TLL++ KR FL+ L V+ + G
Sbjct: 69 LVGKEKVIDVGTGAGFPSLPLKIIYPDLALTLLDASKKRVSFLQRVCYKLGLSKVEFIHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +RE+YD AVARAVA + +L+EY +P V+ G F+A KG + ++EV N E+
Sbjct: 129 RAEDYGQNDDYRERYDYAVARAVASLNVLSEYVVPFVKKEGQFIAQKGPEVEQEVINGEQ 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G +L++ + +R + K TP +YPR G P K PL
Sbjct: 189 AIKLLGGKVLKVKEITLPFSEAERRLAIIDKVSSTPVEYPRQAGQPKKKPL 239
>gi|153815415|ref|ZP_01968083.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|317500877|ref|ZP_07959089.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|336439386|ref|ZP_08618999.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847274|gb|EDK24192.1| 16S rRNA methyltransferase GidB [Ruminococcus torques ATCC 27756]
gi|316897757|gb|EFV19816.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|336016063|gb|EGN45858.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
1_1_57FAA]
Length = 239
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q+EQ Y + L++WN MNLT + D +EV +H DSL ++ +N + D+
Sbjct: 18 NLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTLV---RNIDMNKIDA 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PGL + IA P V LL+S+NKR FL + L +V+ +
Sbjct: 75 -------VIDIGTGAGFPGLPIKIAFPHIHVVLLDSLNKRIKFLNAVIEELDLADVETLH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE K +REQ+D+ V+RAVA + L+EYC+P V+ G FV+ K EE++ +E
Sbjct: 128 GRAEDYAKRKEYREQFDLCVSRAVANLSTLSEYCIPFVKRNGYFVSYKSGSSDEEIQQAE 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+AV ++G + + R V K + TP KYPR G P++ PL
Sbjct: 188 KAVNILGGKIEKTDKFLLPETDMGRALVNIKKIKITPAKYPRKAGMPSREPL 239
>gi|421729513|ref|ZP_16168643.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407076483|gb|EKE49466.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 239
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY L++WN KMNLT++ + EV +H DS+ T+
Sbjct: 16 SLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKEVYLKHFYDSI----------TAAFYI 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P L + I P VT+++S+NKR FLE QL + V
Sbjct: 66 DFEKVTTLCDVGAGAGFPSLPVKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTTFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +D+ ARAVA + +L+E CLPL + G+F A K EE+K +
Sbjct: 126 DRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKKNGIFAALKAAAADEELKAGQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G L Q+ S +R ++ K++ TPKKYPR PGTP K P+
Sbjct: 186 KAIKVLGGELEQVHSFTLPVEESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|323703265|ref|ZP_08114916.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|333924889|ref|YP_004498469.1| ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531730|gb|EGB21618.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|333750450|gb|AEF95557.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 240
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+ T+Q + Y+ +++ N K+NLTA+ + EV +H DSL T S
Sbjct: 19 IETQQISLFNKYLSLIIEGNEKINLTAILEPKEVAIKHFVDSL----------TCLLAVS 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ K++D+G+GAG PG+ L I PD ++TL++S+NKR +FL+ ++ L N+ +
Sbjct: 69 FPTGAKVLDIGSGAGFPGVPLKIYRPDLQITLMDSLNKRILFLQDTINKLGLNNITAIHS 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ + RE +DV V+RAVA + +L+EYCLP V++GG F++ KG D E+K +++
Sbjct: 129 RAEDFGQQPANRENFDVVVSRAVARLVVLSEYCLPCVKIGGYFISQKGPDIDNEIKEAQK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L ++ ++ R+ VV K + TPK+YPR G PAK P+
Sbjct: 189 AIDKLGGQLSEVKKLQLPLIGDPRSLVVIKKIKPTPKQYPRKAGVPAKKPI 239
>gi|384267614|ref|YP_005423321.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385267016|ref|ZP_10045103.1| 16S rRNA methyltransferase GidB [Bacillus sp. 5B6]
gi|387900756|ref|YP_006331052.1| glucose inhibited division protein B [Bacillus amyloliquefaciens
Y2]
gi|394994140|ref|ZP_10386870.1| 16S rRNA methyltransferase GidB [Bacillus sp. 916]
gi|429507386|ref|YP_007188570.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452857693|ref|YP_007499376.1| 7-methylguanosine methyltransferase (16S rRNA,nucleotide G527)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|380500967|emb|CCG52005.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385151512|gb|EIF15449.1| 16S rRNA methyltransferase GidB [Bacillus sp. 5B6]
gi|387174866|gb|AFJ64327.1| glucose inhibited division protein B [Bacillus amyloliquefaciens
Y2]
gi|393805026|gb|EJD66415.1| 16S rRNA methyltransferase GidB [Bacillus sp. 916]
gi|429488976|gb|AFZ92900.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452081953|emb|CCP23727.1| 7-methylguanosine methyltransferase (16S rRNA,nucleotide G527)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 239
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY L++WN KMNLT++ + EV +H DS+ T+
Sbjct: 16 SLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKEVYLKHFYDSI----------TAAFYI 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P L + I P VT+++S+NKR FLE QL + V
Sbjct: 66 DFEKVTTLCDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTTFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +D+ ARAVA + +L+E CLPL + G+F A K EE+K +
Sbjct: 126 DRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKKNGVFAALKAAAADEELKAGQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G L Q+ S +R ++ K++ TPKKYPR PGTP K P+
Sbjct: 186 KAIKVLGGELEQVHSFTLPVEESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|375364508|ref|YP_005132547.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451344767|ref|YP_007443398.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens IT-45]
gi|371570502|emb|CCF07352.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449848525|gb|AGF25517.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens IT-45]
Length = 239
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY L++WN KMNLT++ + EV +H DS+ T+
Sbjct: 16 SLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKEVYLKHFYDSI----------TAAFYI 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P L + I P VT+++S+NKR FLE QL + V
Sbjct: 66 DFEKVTTLCDVGAGAGFPSLPVKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTTFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +D+ ARAVA + +L+E CLPL + G+F A K EE+K +
Sbjct: 126 DRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKKNGIFAALKAAAADEELKAGQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G L Q+ S +R ++ K++ TPKKYPR PGTP K P+
Sbjct: 186 KAIKVLGGELEQVHSFTLPVEESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|212640675|ref|YP_002317195.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus WK1]
gi|212562155|gb|ACJ35210.1| Methyltransferase GidB [Anoxybacillus flavithermus WK1]
Length = 238
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q Q Y L++WN +MNLTA+ D V +H DS I P ++
Sbjct: 17 SLSPQQLTQFETYYQLLVEWNERMNLTAITDKEGVYLKHFFDS--ITPAFYYDFSQ---- 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L + DVG GAG P + L I P V++++S+ KR FL H + L V
Sbjct: 71 ----PLSICDVGAGAGFPSIPLKICFPHLHVSIVDSLQKRITFLNHLAAQLGLEGVAFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ S RE +DV +ARAVA + +L+E CLPLV+VGG F+A KG QEE++ +
Sbjct: 127 DRAETFGQK-SVRESFDVVMARAVARLSVLSELCLPLVKVGGTFIAMKGASAQEELEQGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++ +R V K R+TPKKYPR PG P K+P+
Sbjct: 186 TAIRVLGGEVAKVEQFLLPIEESERAIVFVEKKRKTPKKYPRKPGVPNKLPI 237
>gi|227893998|ref|ZP_04011803.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
gi|227864199|gb|EEJ71620.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
Length = 240
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 143/240 (59%), Gaps = 14/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H L +Q++Q LY L++ N +NLT + + +EV +H DS + P+
Sbjct: 11 SKHNFKLTDKQKQQFKLYFKLLVEVNEHVNLTRITEEDEVYLKHFYDS---VTPLFTFGE 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
D + L DVG GAG P + L I P KVT+++S+ KR FL+ ++ L +
Sbjct: 68 VFKDGAT-----LCDVGAGAGFPSIPLKILKPTLKVTIVDSLQKRLNFLKDLIAQLGLTD 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V++V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPLV+ G FVA KG ++E
Sbjct: 123 VELVHGRAEDVGQNKLYREKFDIVTARAVARMSVLSEYCLPLVKKEGYFVALKGPKAEDE 182
Query: 233 VKNSERAVQLMGASLLQ---LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + ++A++++G L++ L ES+ +RT V+ K + TPKKYPR GTP + P+
Sbjct: 183 LDDGKKALEVLGGKLIKDEGLTLPESEE---ERTLVLVQKIKATPKKYPRQAGTPRRKPI 239
>gi|427392917|ref|ZP_18886820.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Alloiococcus
otitis ATCC 51267]
gi|425731003|gb|EKU93831.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Alloiococcus
otitis ATCC 51267]
Length = 238
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 131/239 (54%), Gaps = 10/239 (4%)
Query: 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 110
V + F+ LN Q +Q Y+ L +WN K+NLTA+ EV +H DS+ +
Sbjct: 10 VKADGFD-LNQDQLDQFDRYLKLLQKWNEKVNLTAITQSEEVYLKHFYDSICL------- 61
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
+ D + N + L DVG+GAG P L L I P+ +VT+++S+ KR FL+ V L
Sbjct: 62 -AKYVDLASN-DFSLCDVGSGAGFPSLPLKILFPNLRVTIVDSLRKRIDFLKVLVEALGL 119
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V + RAET G+D FR +D ARAVA M +LAE CLPL ++GG F+A K
Sbjct: 120 TGVDLYHDRAETFGQDKDFRASFDYTTARAVARMNVLAELCLPLNKLGGTFIAMKASSAS 179
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E+ ++ A+ +G + + + + G R ++ K + +P KYPR PGTP K PL
Sbjct: 180 QELAEAQAAIATLGGKVREDAAFDLPEDGGTRHMILIDKKKESPNKYPRKPGTPNKKPL 238
>gi|188588844|ref|YP_001922715.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
gi|226796820|sp|B2V1U8.1|RSMG_CLOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188499125|gb|ACD52261.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ +Y + L +WN K+NLTA+ + +++++H DS I K +
Sbjct: 18 LSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDS---IKAFKRDEFKEAKT- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PG+ +AI + +VTLL+S+NKR FL L NV +
Sbjct: 74 ------LIDVGTGAGFPGIPVAIMNENIQVTLLDSLNKRVNFLNLVTEKLGLKNVVAIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + RE +D+A +RAVA M +L+E+CLP V++ G F+A KG +EE+K+S++
Sbjct: 128 RAEDGARQKNLRESFDIATSRAVANMSVLSEFCLPYVKINGHFIALKGPAVEEEIKDSDK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G LL +C VE + + VV K + PK YPR G K P+
Sbjct: 188 AITTLGGQLLDICEVEIEDTELKHNLVVVKKIKECPKVYPRKAGNVTKKPI 238
>gi|407718858|ref|YP_006796263.1| 16S rRNA methyltransferase GidB [Leuconostoc carnosum JB16]
gi|407242614|gb|AFT82264.1| 16S rRNA methyltransferase GidB [Leuconostoc carnosum JB16]
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 136/232 (58%), Gaps = 11/232 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q +Q Y + L+ N +NLTA+ + +V +H DSL I KN +
Sbjct: 17 LTKKQIQQFEQYFNMLVATNENVNLTAITNQPDVYLKHFYDSLTIAFYEKNLQLA----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+D+G GAG P L L I P+ K+T+++++ KR FL+ V+ L V+IV
Sbjct: 72 ---NKSLIDIGAGAGFPSLPLKIVFPNIKITMVDALQKRVNFLQEVVTTLDLSGVEIVHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+D +RE++D A ARAVA +LAEY LP V++GG F+ KG ++E+ + ++
Sbjct: 129 RAEDIGQDSHYRERFDYATARAVARTSVLAEYTLPFVKIGGRFLVMKGSAAEQELADGQK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + S E + P G R + K ++TPKKYPR GTP+K P+
Sbjct: 189 ALAVLGGEVSE--SFEFKLPNGDVRYIQMVDKHKKTPKKYPRQAGTPSKKPI 238
>gi|421490538|ref|ZP_15937910.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus SK1138]
gi|400373028|gb|EJP25963.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
anginosus SK1138]
Length = 237
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +QQ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LTDQQQMQFERYFELLVEWNKKINLTAITEKKEVYLKHFYDSIA---PILQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++KL+D+G GAG P L + I P VT+++S+NKR +FL H L V G
Sbjct: 69 -NKDIKLLDIGAGAGFPSLPIKILYPALDVTIIDSLNKRILFLNHLADELGLEKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+ILAE +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKDFRAQFDIVTARAVARMQILAELTIPFLKVGGRLLALKASNAPEELTEAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + ++ Q P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVEE--NIHYQLPNGDPRYITVVGKKKETPNKYPRKAGIPNKRPL 237
>gi|373494059|ref|ZP_09584665.1| 16S rRNA methyltransferase GidB [Eubacterium infirmum F0142]
gi|371969193|gb|EHO86644.1| 16S rRNA methyltransferase GidB [Eubacterium infirmum F0142]
Length = 235
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 130/224 (58%), Gaps = 12/224 (5%)
Query: 66 QIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 125
+ LY+ +L WN+K+NLTA+ D +E +E+H DSL I + C K+
Sbjct: 24 RFELYMKGVLDWNKKINLTAITDEDEFVEKHYIDSLKI------AKLGLIKPGC----KV 73
Query: 126 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 185
+D+GTG G PG+ LAIA P + L++S+ KR +E + NV V GRAE LG+
Sbjct: 74 IDIGTGGGFPGVPLAIAYPKTEFVLVDSLKKRLKVIEELCGNVGINNVSTVHGRAEDLGR 133
Query: 186 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 245
+ +RE +D V+RAVA + L EYCLP+V+ G F+A K + E+KN+E+AV+++G
Sbjct: 134 NFEYRENFDCCVSRAVANLSTLCEYCLPMVKQDGYFIAYKTDAAKVEIKNAEKAVRILGG 193
Query: 246 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++ S + + V K + TP YPR PGTP+K PL
Sbjct: 194 GDVEIISSDHEDI--DHCFVKIKKVKITPNVYPRKPGTPSKQPL 235
>gi|251780390|ref|ZP_04823310.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084705|gb|EES50595.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ +Y + L +WN K+NLTA+ + +++++H DS I K +
Sbjct: 18 LSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDS---IKAFKRDEFKKAKT- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PG+ +AI + +VTLL+S+NKR FL L NV +
Sbjct: 74 ------LIDVGTGAGFPGIPVAIMNENIQVTLLDSLNKRVNFLNLVTEKLGLKNVVAIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + RE +D+A +RAVA M +L+E+CLP V++ G F+A KG +EE+K+S++
Sbjct: 128 RAEDGARQKNLRESFDIATSRAVANMSVLSEFCLPYVKINGHFIALKGPAVEEEIKDSDK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G LL +C VE + + VV K + PK YPR G K P+
Sbjct: 188 AITTLGGQLLDICEVEIEDTELKHNLVVVKKIKECPKVYPRKAGNVTKKPI 238
>gi|320530365|ref|ZP_08031427.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
gi|320137377|gb|EFW29297.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
Length = 244
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 130/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q EQ Y + LL WN +MNLTA+ +V +HI DSL ++Y +
Sbjct: 20 LTNAQLEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSL-------SAYDVPLFAR 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S L+DVGTGAGLPG+ LAI P+ +VTL++++ KR FL + L NV V
Sbjct: 73 AKS---LIDVGTGAGLPGIPLAIYAPEIEVTLMDALQKRVRFLTEVIEQLGLKNVVCVHA 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++R QYD+AV+RAVA + +LAEY LP VRVGG F+A KG EE++
Sbjct: 130 RAEAAARMHTYRAQYDIAVSRAVARLPVLAEYALPFVRVGGTFLALKGRAYAEEMEEGRA 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+++G + V R +V K R TP+ YPR GTP K PL
Sbjct: 190 AVEMLGGGGIAARPVTLPGLDDVRAVLVIEKYRSTPRAYPRREGTPEKSPL 240
>gi|83591333|ref|YP_431342.1| methyltransferase GidB [Moorella thermoacetica ATCC 39073]
gi|123523727|sp|Q2RFJ0.1|RSMG_MOOTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83574247|gb|ABC20799.1| 16S rRNA m(7)G-527 methyltransferase [Moorella thermoacetica ATCC
39073]
Length = 240
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 134/237 (56%), Gaps = 20/237 (8%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI-----IPPIKNSYT 112
TL Q I Y LL +N+++NLTA+ D E+ +H+ DSL + IPP
Sbjct: 18 TLKPEQIAMIEAYTGLLLDYNQRVNLTAITDREEIWRKHVLDSLLLFLALEIPPAA---- 73
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
K++D+GTGAG+PGL+L I PD ++ LLES NK+ FL+ AV+ L
Sbjct: 74 -----------KVIDIGTGAGIPGLILKIYRPDLEMALLESQNKKVAFLKKAVATLGLQG 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
++ + GRAE +G+ ++RE +D+AV+R +A M LAEYCLP VRVGG +A KG + E
Sbjct: 123 IECLWGRAEDIGRQKNYRESFDLAVSRGLAGMNTLAEYCLPFVRVGGFMIAYKGPGGEGE 182
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + RA++++G ++ R ++ K TP YPR PG PAK PL
Sbjct: 183 LNAAARAIEILGGGTKKVWRGSLTGGQEVRQLIIIQKEHPTPPVYPRRPGLPAKRPL 239
>gi|253573865|ref|ZP_04851207.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846342|gb|EES74348.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
Length = 240
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 135/236 (57%), Gaps = 10/236 (4%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H ++ Q +Q Y + L+ WN KMNLT + + +V +H DS+++ +
Sbjct: 14 EHGIEVSEEQLKQFERYYEELVSWNEKMNLTGITEREQVYIKHFYDSISLAFHVP---MG 70
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
+S D+G+GAG PG+ L I P ++T+++S+NKR FL+H V+ L V
Sbjct: 71 EIESKA-------DIGSGAGFPGIPLKICFPHLQLTIVDSLNKRIQFLQHVVNELGLNQV 123
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
+++ GRAE LG+ R+ +D+ ARAVA M IL E+CLP V+ GGLFVA KG +P++EV
Sbjct: 124 RLLHGRAEDLGRQEDLRDAFDLVTARAVARMAILNEFCLPFVKPGGLFVAMKGSNPEDEV 183
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
K + R++ + + + +R V+ K+ TP+KYPR G PAK+PL
Sbjct: 184 KEAARSLSELKGKWVSTPAFSLPLENSERHLVLIQKTAPTPQKYPRKAGIPAKMPL 239
>gi|310659879|ref|YP_003937600.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [[Clostridium]
sticklandii]
gi|308826657|emb|CBH22695.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [[Clostridium]
sticklandii]
Length = 240
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
+ QQ +Y+D LL++N+ MNLTA++D E+ +H DSL+ + D
Sbjct: 18 ITENQQNNFKIYMDTLLEYNKVMNLTAIEDPEEIYTKHFLDSLSCL---------LVDEL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
LK +DVGTGAG P + + I PD K+T+L+S+NKR FL+ + L N + +
Sbjct: 69 KTVGLKAIDVGTGAGFPSIPIKIMRPDIKMTMLDSLNKRINFLKEVGARVGLDNAEYLHS 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G + +REQYD+ ++RAVA + +L EYC P ++ GG F+ KG + EV+ +++
Sbjct: 129 RAEDAGSNPKYREQYDIVLSRAVASLPVLLEYCSPFLKKGGYFICQKGPAAKSEVEQAKK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G SL + ++ +V K TPK YPR G P+K PL
Sbjct: 189 ALAVLGCSLEYIKEIDIPYTDLNHNILVIKKISNTPKNYPRKAGKPSKEPL 239
>gi|392395697|ref|YP_006432299.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390526775|gb|AFM02506.1| 16S rRNA m(7)G-527 methyltransferase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 239
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 136/235 (57%), Gaps = 21/235 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ Y D L+QWN K+NLT++ + E++ +H DSLA++ I+ +
Sbjct: 21 LSQDQVEKFSTYADLLVQWNEKVNLTSITEPEEIILKHFIDSLALVSFIQGN-------- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
KL D+GTGAG PG+ L I P+ +V L++S+ KR FLE + +L V+ +
Sbjct: 73 -----KLADIGTGAGFPGIPLKILLPEVEVYLVDSLAKRLDFLEVVIEELELKKVKTIHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +RE +D +RAVA + +L EY +PL++ GG F+AAKG EE S++
Sbjct: 128 RAEDFARDPKYRETFDCVTSRAVARLPVLLEYAVPLLKKGGYFLAAKGSQANEEAMQSKK 187
Query: 239 AVQLMGASLLQL----CSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++GA + ++ VE++ R ++ K TP YPR GTPAK PL
Sbjct: 188 ALEILGAEIKEIKLFNLGVEAE----HRAIILVEKILPTPHAYPRKAGTPAKKPL 238
>gi|403382751|ref|ZP_10924808.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. JC66]
Length = 240
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 134/233 (57%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q Q +Y L++WN KMNLTA+ + +V +H DSL++ S+ D
Sbjct: 20 LNDVQLNQFAIYYRELVEWNEKMNLTAITEREQVYVKHFYDSLSL------SFFIDLDHV 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV--QIV 176
+ D+G+GAG PG+ L I P ++T+++S+ KR FL+H L++ L V Q +
Sbjct: 74 KT----MADIGSGAGFPGIPLLILYPHLQLTIIDSLKKRIGFLQH---LSEQLGVKLQTI 126
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE LG+D R+QYD+ ARAVA + +L E+CLP V+ G F A KG QEE++ +
Sbjct: 127 HGRAEDLGRDSVHRDQYDLVTARAVARLNVLNEFCLPFVKPAGRFAAMKGSSAQEELEEA 186
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++ + A L+ + +E +R +V K+ TP KYPR PG P K PL
Sbjct: 187 NFSMKELRARLIDIHRLELPGDQAERHIIVLEKTANTPAKYPRSPGIPLKKPL 239
>gi|299820856|ref|ZP_07052745.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
gi|299817877|gb|EFI85112.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
Length = 238
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y L++WN KMNLTA+ + EV +H DS+ S + D
Sbjct: 17 LSEKQLQQFEDYFHMLVEWNEKMNLTAITNKEEVYLKHFYDSI--------SAAFYVDFE 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++L D+G GAG P + + I P K+++++S+ KR FL L +VQ
Sbjct: 69 NQASL--CDIGAGAGFPSIPIKICFPHLKISIVDSLQKRITFLNSLAEKLDLTDVQFFHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK+ FR YD ARAVA M +LAE CLPLVR GG F+A K + E++ +
Sbjct: 127 RAEDFGKNKDFRASYDYVTARAVARMSVLAELCLPLVRKGGYFIAMKAAQAEAEMEQGNK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L + + E +R LK++ TP KYPR G P K P+
Sbjct: 187 AITVLGGKLEKQFAFELPVEHSERHIYTILKTKETPNKYPRKAGMPNKQPI 237
>gi|167038667|ref|YP_001666245.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320117059|ref|YP_004187218.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|193806452|sp|B0K8H7.1|RSMG_THEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166857501|gb|ABY95909.1| methyltransferase GidB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930150|gb|ADV80835.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 240
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 132/227 (58%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E Y LL+WN+KMNLTA+ + +EV+ +H DSL+++ K
Sbjct: 26 EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVK----------SGKIKEEEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL+S KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D+++ARAVA + IL EY LP V+V G F+A KG + +EE++NS+RA++ +
Sbjct: 136 KDIKYREQFDLSMARAVAPLNILLEYTLPFVKVDGYFIALKGREIEEEIENSQRALKELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ + + P+ V+ K P KYPR + PL
Sbjct: 196 GEIEEVKEI--KLPYSDIVHHLVIIKKIDNCPTKYPRRANAIQRSPL 240
>gi|302877166|ref|YP_003845799.1| methyltransferase GidB [Clostridium cellulovorans 743B]
gi|307687865|ref|ZP_07630311.1| 16S rRNA methyltransferase GidB [Clostridium cellulovorans 743B]
gi|302580023|gb|ADL54035.1| methyltransferase GidB [Clostridium cellulovorans 743B]
Length = 239
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 10/220 (4%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y + L +WN K+NLTA+ + E++++H DS+ I + S N+ ++DVG
Sbjct: 29 YKNLLKEWNEKINLTAITEDEEIIKKHFIDSIKI-------FRFSPLSKMNN---IIDVG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PGL + I PD KVTLL+S+NKR FL +S + N+ + GRAE +
Sbjct: 79 TGAGFPGLPIKIVNPDIKVTLLDSLNKRVNFLNTVISELGINNIDAIHGRAEEFSRKEEH 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
R Q+D AV+RAVA + +L+E C+P V+ G F+A KG +EE+K +++A+ ++G L +
Sbjct: 139 RGQFDGAVSRAVANLTVLSELCIPYVKNNGYFIALKGPAVEEEIKQAKKAIGILGGKLEE 198
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ VE + + V+ K + TPK YPR+ G K PL
Sbjct: 199 ILPVEVEGTDLRHNLVIIKKVKDTPKIYPRNAGNITKKPL 238
>gi|227498806|ref|ZP_03928946.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
gi|226904258|gb|EEH90176.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
Length = 239
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 128/232 (55%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ + +Y D LL+ NR +NLTA+ D EV +H+ DSL I N H
Sbjct: 14 TLSDEALRRFEIYKDELLETNRFLNLTAITDPEEVAVKHMVDSLTIY----NEKRFH--- 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVGTGAG PGL L I P ++TL++S+ KR FLE L ++
Sbjct: 67 ----NRTIADVGTGAGFPGLPLKIYDPTMRLTLIDSLAKRLAFLEKVAKDMGLGQIRCHH 122
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+D RE++DV VARAVA M +LAEYCLPLVRVGG+F A KG EE +
Sbjct: 123 ARAEEAGRDPKLREKFDVVVARAVAPMPVLAEYCLPLVRVGGVFYAMKGSKGMEEAEEGR 182
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G ++ + + +R + K R T ++YPR PG K PL
Sbjct: 183 QAISILGGKIVDIRHLTLPGLDDKRYIITIEKIRPTGEQYPRRPGIATKRPL 234
>gi|160882057|ref|YP_001561025.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
gi|189039497|sp|A9KLX7.1|RSMG_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160430723|gb|ABX44286.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
Length = 242
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 134/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q EQ +Y D L++WN MNLTA+ + EV+++H DSL++I SY +
Sbjct: 18 LNKHQLEQFEIYYDLLIEWNSFMNLTAITEYEEVIQKHFLDSLSLI----KSYQIKTGDT 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ L IA PD V L++S+NKR FL ++ +L N+ + G
Sbjct: 74 ------LLDMGTGAGFPGIPLKIAYPDLNVLLMDSLNKRINFLNEVINRLELKNISAMHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + FRE++D+ V+RAVA LAE CLP V+ GG F+ K EE++ +E
Sbjct: 128 RAEEQARKLDFREKFDIVVSRAVARTASLAELCLPYVKKGGYFIPYKSGKVTEELEEAEY 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G L + + +RT + K + TPK YPR G P K+PL
Sbjct: 188 ALECLGGKLEEKVTFSLPDTDMERTLICIKKVKETPKSYPRAGGKPLKMPL 238
>gi|352685794|ref|YP_004897779.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
intestini RyC-MR95]
gi|350280449|gb|AEQ23639.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
intestini RyC-MR95]
Length = 242
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 128/232 (55%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ + +Y D LL+ NR +NLTA+ D EV +H+ DSL I N H
Sbjct: 17 TLSDEALRRFEIYKDELLETNRFLNLTAITDPEEVAVKHMVDSLTIY----NEKRFH--- 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N + DVGTGAG PGL L I P ++TL++S+ KR FLE L ++
Sbjct: 70 ----NRTIADVGTGAGFPGLPLKIYDPTMRLTLIDSLAKRLAFLEKVAKDMGLGQIRCHH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+D RE++DV VARAVA M +LAEYCLPLVRVGG+F A KG EE +
Sbjct: 126 ARAEEAGRDPKLREKFDVVVARAVAPMPVLAEYCLPLVRVGGVFYAMKGSKGMEEAEEGR 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G ++ + + +R + K R T ++YPR PG K PL
Sbjct: 186 QAISILGGKIVDIRHLTLPGLDDKRYIITIEKIRPTGEQYPRRPGIATKRPL 237
>gi|402311451|ref|ZP_10830394.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnospiraceae bacterium ICM7]
gi|400372306|gb|EJP25251.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnospiraceae bacterium ICM7]
Length = 241
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 141/231 (61%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ ++E+++ + + L++ N+ MNLT++ ++ E +H DS+A+ +K+ DS+
Sbjct: 19 ISDEKKEKLYKFYEILVEKNKFMNLTSITEIKEFTYKHFIDSIALEKIVKD-----LDSN 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + D+GTGAG PG+ LAI P+ +TL++S+NKR F++ + + NV +
Sbjct: 74 ---NYNIADLGTGAGFPGIPLAIVYPNLNLTLIDSLNKRIKFIKETCDVLDIKNVDAIHS 130
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++ +RE++D+ V+RAVA + L+EYCLPLV+VGG FV+ K + E+ +++
Sbjct: 131 RAEDIDRNKDYREKFDICVSRAVANLASLSEYCLPLVKVGGSFVSYKSKGYEVEISEAQK 190
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + E +G+R + K + TP KYPR G P K P+
Sbjct: 191 AIKVLGGETGNIEKFE-LGEYGERILLNIKKIKSTPNKYPRKAGLPTKEPI 240
>gi|450093647|ref|ZP_21856676.1| 16S rRNA methyltransferase GidB [Streptococcus mutans W6]
gi|450148414|ref|ZP_21875600.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 14D]
gi|449217128|gb|EMC17202.1| 16S rRNA methyltransferase GidB [Streptococcus mutans W6]
gi|449235876|gb|EMC34819.1| 16S rRNA methyltransferase GidB [Streptococcus mutans 14D]
Length = 237
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 131/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+EQ LY L++WN K+NLTA+ + EV +H DS+A P+ + Y
Sbjct: 11 AKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIA---PLLSGYI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N +LKL+D+G GAG P L + I P VT+++S+NKR FL +L
Sbjct: 68 P------NESLKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRIKFLNLLADALELDK 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE G+D +FR +D+ ARAVA +++L+E +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+K ++ A+ L+ + S Q P G R + K + TP KYPR G P K L
Sbjct: 182 LKTAQNALNLLFSQ--TTSSDNYQLPNGDGRNLTIITKKKETPNKYPRKAGMPNKKSL 237
>gi|392330704|ref|ZP_10275319.1| 16S rRNA methyltransferase GidB [Streptococcus canis FSL Z3-227]
gi|391418383|gb|EIQ81195.1| 16S rRNA methyltransferase GidB [Streptococcus canis FSL Z3-227]
Length = 237
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 135/233 (57%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q+EQ Y L++WN K+NLTA+ + N+V +H DS+A PI + S
Sbjct: 16 SLSLKQKEQFDTYFKLLVEWNTKINLTAITEENDVYLKHFYDSIA---PILQGFLS---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N ++L+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NDPVRLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G++ +FR Q+D+ ARAVA M++L+E +P +++GG +A K +E+++++
Sbjct: 127 GRAEDFGQNKAFRAQFDIVTARAVARMQVLSELTIPFLKIGGKLIALKAQAADQELEDAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + Q P G R V K + TP KYPR G P K PL
Sbjct: 187 TALSLLFGKV--IVNHHYQLPNGDSRYITVVEKKKETPNKYPRKAGLPNKKPL 237
>gi|225386362|ref|ZP_03756126.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
gi|225047544|gb|EEG57790.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
Length = 243
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 8/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
LN Q EQ Y + L++ N+ MNLTA+ + +V+ +H DSL+++ + +
Sbjct: 19 ALNGGQLEQFFRYYELLVERNKVMNLTAITEEQDVVTKHFTDSLSLVKLM--------GA 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+DVGTGAG PG+ L IA P+ VTLL+S+NKR FL L ++ V
Sbjct: 71 EAFAGKTLMDVGTGAGFPGIPLKIAFPELNVTLLDSLNKRVRFLMDVCEELGLKDITAVH 130
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+++ +REQ+D+ V+RAVA + L+EYC+P V+VGG FV K + +EE++ +
Sbjct: 131 GRAEDFGRNLQYREQFDLCVSRAVANLASLSEYCMPFVKVGGYFVPYKSGEIEEELEAGK 190
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RAV+++G + + R+ + K + KYPR G P K PL
Sbjct: 191 RAVKILGGEVEGVEKFTLPGADASRSLIRIRKIKGISGKYPRKAGLPTKEPL 242
>gi|403669905|ref|ZP_10935081.1| methyltransferase gidB [Kurthia sp. JC8E]
Length = 238
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+T Q++Q Y L++WN KMNLTA+ D V +H DS++ + TS CD
Sbjct: 17 LSTEQKQQFDTYFKTLVEWNEKMNLTAITDQPSVYLKHFYDSISAAFYVDFTKVTSVCD- 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
VG GAG P + + I P ++T+++S+NKR FL H L N+ V
Sbjct: 76 ----------VGAGAGFPSIPIKICFPHLQITIVDSLNKRIQFLNHLSDELGLSNMNFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G++ +RE +D+ ARAVA M +L+E C+PLV+ GG FVA K ++E+K+++
Sbjct: 126 SRAEDFGRNPKYREAFDLVTARAVARMSVLSELCIPLVKEGGQFVAMKAASGEDELKDAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G L + + +R K + TPKKYPR PG P K+P+
Sbjct: 186 KALSVLGVKLNKEFNFVLPVEESERVIFTFDKVKTTPKKYPRKPGMPNKMPI 237
>gi|406659560|ref|ZP_11067698.1| glucose inhibited division protein B [Streptococcus iniae 9117]
gi|405577669|gb|EKB51817.1| glucose inhibited division protein B [Streptococcus iniae 9117]
Length = 238
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 132/234 (56%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y L++WN K+NLTA+ + N+V +H DS+A PI Y
Sbjct: 17 LSPKQKEQFKTYFHFLVEWNEKVNLTAITEENDVYLKHFYDSIA---PILQGYIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P + + I P+ +T+++S+NKR FL +L +V G
Sbjct: 69 -NDKVKLLDIGAGAGFPSIPMKIIFPELNITIIDSLNKRIHFLNQLAQKLELTDVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D ARAVA M++L+E +P +R+GG +A K +E+ ++++
Sbjct: 128 RAEDFGQDKTFRSQFDFVTARAVARMQVLSELTIPFLRIGGKLLALKAQAVDQELTDAKK 187
Query: 239 AVQLMGASLLQ---LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++ + +++ C S R + K + TP KYPR G P K PL
Sbjct: 188 ALAILFSQVIENQHYCLPNGDS----RYITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|28209871|ref|NP_780815.1| 16S rRNA methyltransferase GidB [Clostridium tetani E88]
gi|38257542|sp|Q899S0.1|RSMG_CLOTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28202306|gb|AAO34752.1| glucose inhibited division protein B [Clostridium tetani E88]
Length = 239
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 129/220 (58%), Gaps = 10/220 (4%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y + +WN+K+NLTA+ + +++++H D + I Y N K++DVG
Sbjct: 29 YKSMIQEWNKKINLTAITEDEDIIKKHFIDCIKI-------YKFDKFKKLN---KIMDVG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PG+ + I + +V LL+S+NKR FL+ +L N++ + GRAE + F
Sbjct: 79 TGAGFPGIPIKILEEEKEVILLDSLNKRIKFLDEVSKELKLENIKNLHGRAEDYAQKEEF 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
REQ+D V+RAVA + +L+E+CLP +RVGG F+A KG + EE+ ++A++L+G L +
Sbjct: 139 REQFDGVVSRAVANISVLSEFCLPYIRVGGYFIAMKGPNVSEEIDEGKKAIELLGGKLQE 198
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ VE + + V+ K + TP KYPR G K PL
Sbjct: 199 IIQVEVEESDLKHNLVIIEKIKNTPNKYPRKAGMVTKKPL 238
>gi|154688205|ref|YP_001423366.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens FZB42]
gi|166224573|sp|A7ZAV9.1|RSMG_BACA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154354056|gb|ABS76135.1| GidB [Bacillus amyloliquefaciens FZB42]
Length = 239
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ LY L++WN KMNLT++ + +V +H DS+ T+
Sbjct: 16 SLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKDVYLKHFYDSI----------TAAFYI 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L DVG GAG P L + I P VT+++S+NKR FLE QL + V
Sbjct: 66 DFEKVTTLCDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLETLSDALQLEHTSFVH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +D+ ARAVA + +L+E CLPL + G+F A K EE+K +
Sbjct: 126 DRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKKNGVFAALKAAAADEELKAGQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G L Q+ S +R ++ K++ TPKKYPR PGTP K P+
Sbjct: 186 KAIKVLGGELEQVHSFTLPVEESERNIMIIRKTKSTPKKYPRKPGTPNKSPI 237
>gi|182416728|ref|ZP_02948127.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237669667|ref|ZP_04529645.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379385|gb|EDT76880.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237654901|gb|EEP52463.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 239
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q E+ Y+ L +WN K+NLTA+ + EV+++H D I K ++
Sbjct: 18 LSEQQYERFMKYMRLLQEWNEKINLTAITEDEEVVKKHFIDC---IKAFKRDEFKKAET- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG PGL +AI D KVTLL+S+NKR FL V L NV +
Sbjct: 74 ------LIDVGTGAGFPGLPIAIMREDLKVTLLDSLNKRINFLNTVVQELGLKNVTTIHS 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ REQ+D++ +RAVA M +L+E+CLP V++GG F+A KG ++E++ S
Sbjct: 128 RAEDGARNKDLREQFDISTSRAVANMSVLSEFCLPYVKIGGNFIALKGPSVEQEIQESRN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L+ +C V + + VV K + K YPR GT K P+
Sbjct: 188 AIGTLGGQLVDICEVNIEETELKHNLVVVKKIKPCEKIYPRKAGTITKKPI 238
>gi|334342402|ref|YP_004547382.1| methyltransferase GidB [Desulfotomaculum ruminis DSM 2154]
gi|334093756|gb|AEG62096.1| methyltransferase GidB [Desulfotomaculum ruminis DSM 2154]
Length = 245
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 133/236 (56%), Gaps = 20/236 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAII-----PPIKNSYTS 113
L Q E Y LL N K NLTA+ EV +H DSL + PP
Sbjct: 24 LEETQIELFQKYYQMLLAGNEKCNLTAITQPREVAVKHFLDSLTCLLALDFPP------- 76
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
K++DVGTGAG PGL L I PD V L++S++KR VFL+ ++ L+++
Sbjct: 77 --------GAKVLDVGTGAGFPGLPLKIFRPDLDVLLMDSLHKRVVFLQETITHLGLISI 128
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
++ RAE G+ + RE YD+ V+RAVA++ +LAEYCLP V++GG F++ KG D +E+
Sbjct: 129 SAIQDRAEDFGRRENSRENYDIVVSRAVAKLSVLAEYCLPCVKIGGYFISQKGPDMDDEL 188
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S +A+ ++G LL++ ++ R+ VV K + TP YPR GTPAK P+
Sbjct: 189 AESAKALAILGGRLLEVKRLQLPVIGDARSMVVIEKVKSTPGVYPRKAGTPAKKPI 244
>gi|445372332|ref|ZP_21426102.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5460]
gi|445387315|ref|ZP_21427814.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5461]
gi|444751174|gb|ELW75940.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5461]
gi|444751289|gb|ELW76047.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus MTCC
5460]
Length = 237
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++L+D+G GAG P L + I CP+ VT+++S+NKR FL L V G
Sbjct: 69 -NQSIRLLDIGAGAGFPSLPIKILCPNLDVTIIDSLNKRITFLNFLSDELGLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K +E+ ++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADQELVDARN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNVLFAK--PILNENYKLPNGDGRNITIIDKKKETPNKYPRRAGIPNKKPL 237
>gi|312862573|ref|ZP_07722815.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
gi|311101978|gb|EFQ60179.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
Length = 237
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CP+ VT+++S+NKR FL L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELDLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ N++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKATAADEELANAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + + G+ +V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAKPVLNENYKLPNRDGRNITIVN-KKKETPNKYPRRAGMPNKKPL 237
>gi|302390789|ref|YP_003826610.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
gi|302201417|gb|ADL08987.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
Length = 250
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 13/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ + + + ++ D +++WN+++NLTA+ D + + +HI DSL I+ I
Sbjct: 20 IDPEKAKLLGIFKDEIVEWNKRINLTAIVDEEQFIVKHIIDSLIILKKI----------D 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+S KLVDVGTGAG PG+ + I D V L++S K+ FL+HAV L ++
Sbjct: 70 FHSGAKLVDVGTGAGFPGVPVKIMRQDLVVLLMDSSRKKTEFLKHAVKKLGLQRTDVLCA 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +RE YD AVARAV+ + L E CLPLV+VGG+F+A KG DP E++ +
Sbjct: 130 RAEEAAKSGGYREMYDAAVARAVSGLNTLVELCLPLVKVGGIFIAMKGEDPGSEIEEALG 189
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A ++G + + E P G +R +V K + TP+K+PR PG P K P+
Sbjct: 190 AADILGGRIGNVIPYE--LPGGIKRHLIVVEKIKNTPEKFPRRPGMPQKKPI 239
>gi|55820410|ref|YP_138852.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMG
18311]
gi|55822292|ref|YP_140733.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
CNRZ1066]
gi|386086002|ref|YP_006001876.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
gi|386343946|ref|YP_006040110.1| methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus thermophilus JIM 8232]
gi|387909105|ref|YP_006339411.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
MN-ZLW-002]
gi|418027579|ref|ZP_12666209.1| Transferase transferring one-carbon groups [Streptococcus
thermophilus CNCM I-1630]
gi|81559821|sp|Q5M1E6.1|RSMG_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81560991|sp|Q5M5Y2.1|RSMG_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55736395|gb|AAV60037.1| glucose-inhibited division protein B [Streptococcus thermophilus
LMG 18311]
gi|55738277|gb|AAV61918.1| glucose-inhibited division protein B [Streptococcus thermophilus
CNRZ1066]
gi|312277715|gb|ADQ62372.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
gi|339277407|emb|CCC19155.1| methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus thermophilus JIM 8232]
gi|354691465|gb|EHE91391.1| Transferase transferring one-carbon groups [Streptococcus
thermophilus CNCM I-1630]
gi|387574040|gb|AFJ82746.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
MN-ZLW-002]
Length = 237
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++L+D+G GAG P L + I CP+ VT+++S+NKR FL L V G
Sbjct: 69 -NQSIQLLDIGAGAGFPSLPIKILCPNLDVTIIDSLNKRITFLNFLSDELGLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K +E+ ++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADQELVDARN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNVLFAK--PILNENYKLPNGDGRNITIIDKKKETPNKYPRRAGIPNKKPL 237
>gi|19745444|ref|NP_606580.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS8232]
gi|139474384|ref|YP_001129100.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes str.
Manfredo]
gi|306827980|ref|ZP_07461247.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
gi|23821582|sp|Q8P2K1.1|RSMG_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224622|sp|A2RGB9.1|RSMG_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19747557|gb|AAL97079.1| putative glucose-inhibited division protein [Streptococcus pyogenes
MGAS8232]
gi|134272631|emb|CAM30898.1| methyltransferase GidB [Streptococcus pyogenes str. Manfredo]
gi|304429899|gb|EFM32941.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
Length = 237
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 135/233 (57%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA M++L+E +P +++ G +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLKIRGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|389576828|ref|ZP_10166856.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
cellulosolvens 6]
gi|389312313|gb|EIM57246.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
cellulosolvens 6]
Length = 240
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y + L++WN+ MNLTA+ + +EV+ +H DSL + I + D+
Sbjct: 20 LTDTQKKQFIRYYEMLVEWNKVMNLTAITEYDEVISKHFVDSLTLARDI------NFDNV 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+DVGTGAG PGL LAIA P+ +VTL++S+ KR FL + L NV+
Sbjct: 74 GN----LIDVGTGAGFPGLPLAIAYPNVRVTLVDSLMKRVKFLNEVIGALGLTNVEAFHS 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G + FR QYD+ V+RAVA + L EYC P + G A K + + EV+ +
Sbjct: 130 RAEEAGHNRKFRGQYDLVVSRAVANLSTLLEYCTPFAKKDGTIAAYKSNKAEMEVEAAGN 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+ SL ++ + +R ++ K TPK YPR GTP+K PL
Sbjct: 190 ALKLLKCSLEKMDKFTLGNEDMERNILIIRKKGDTPKAYPRKAGTPSKSPL 240
>gi|225016768|ref|ZP_03705960.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
gi|224950436|gb|EEG31645.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
Length = 236
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 139/227 (61%), Gaps = 12/227 (5%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q +Q LY L++WN K+NLT++ D +E++ +H DSL ++ ++
Sbjct: 22 QLDQFDLYAKLLVEWNEKINLTSITDPDEIVIKHFVDSLLLLRA----------ANLPQG 71
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
L+DVGTGAG P LAI D ++T L+S+NKR +FL+ VS L ++ V RAE
Sbjct: 72 ASLIDVGTGAGFPSTPLAILRGDLQITQLDSLNKRILFLQE-VSDQLGLPIKTVHIRAEE 130
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
GK FRE+YD A ARAVA ++ L+EYC+P V++GG F+A KG + +EE+ +++RA+Q
Sbjct: 131 GGKSAEFREKYDYATARAVANLQTLSEYCIPFVKLGGFFIALKGIEIEEELCSAKRAIQT 190
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+GA L + ++ + G R+ V+ K +TP+KYPR G K PL
Sbjct: 191 LGAQLEGVEKLQLPNQDG-RSIVLIKKISQTPQKYPRMQGKIKKNPL 236
>gi|315650202|ref|ZP_07903277.1| glucose inhibited division protein B [Lachnoanaerobaculum saburreum
DSM 3986]
gi|315487559|gb|EFU77867.1| glucose inhibited division protein B [Lachnoanaerobaculum saburreum
DSM 3986]
Length = 241
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 145/247 (58%), Gaps = 13/247 (5%)
Query: 43 KTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA 102
K L+ + I+++ L+ ++E+++ + L++ N+ MNLT++ D+ E +H DS+A
Sbjct: 7 KYLSESNILDT----VLSDEKKEKLYRFYKILIEKNKVMNLTSITDIRECTYKHFIDSIA 62
Query: 103 IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLE 162
I +K+ + D+GTGAG PG+ LAIA P+ ++ L++S+NKR F++
Sbjct: 63 IEKLVKDI--------GEREYSVADLGTGAGFPGIPLAIAFPNLRLDLIDSLNKRVKFIQ 114
Query: 163 HAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFV 222
+L NV + RAE + KD +RE++D+ V+RAVA + L+EYCLPLV+VGG FV
Sbjct: 115 EVCEALELKNVTSIHSRAENIAKDKKYREKFDICVSRAVANLASLSEYCLPLVKVGGSFV 174
Query: 223 AAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 282
+ K EV ++++A+Q++G + + + +G+R + K + T KYPR G
Sbjct: 175 SYKSKGFDVEVNDAKKAIQVLGGEISDSIKFK-LAEYGERILLDIKKVKPTASKYPRKAG 233
Query: 283 TPAKVPL 289
P K P+
Sbjct: 234 LPTKEPI 240
>gi|390933665|ref|YP_006391170.1| Ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569166|gb|AFK85571.1| Ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 240
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 128/234 (54%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN EQ Y D LL+WN KMNLTA+ + E++ +H DSL +
Sbjct: 20 LNMFHVEQFLKYNDLLLKWNEKMNLTAITEEREIIIKHFLDSLTAL-------------K 66
Query: 119 CN---SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
CN +++DVG GAG P + L I P K+T+++S+ KR VFL S L +V+I
Sbjct: 67 CNVIKGTERIIDVGAGAGFPSVPLKILFPSLKLTIVDSLKKRTVFLNELASHLNLNDVEI 126
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ GRAE LGKD+ FRE+YD++++RAVA++ +L EYC+P +V G +A KG + EE+
Sbjct: 127 IHGRAEDLGKDIDFREKYDISLSRAVAQLNVLIEYCIPFTKVDGYLIAYKGSNADEEINA 186
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ A+ ++ + + V V+ K T KYPR P K PL
Sbjct: 187 SQNALNVLRCQIENVIDVTLPYTDIHHKLVLIKKLSVTDDKYPRKPKLIEKSPL 240
>gi|329767566|ref|ZP_08259087.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
gi|328839193|gb|EGF88777.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
Length = 237
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 133/231 (57%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q+EQ Y D +++WN+K+NLTA+ + +E +H DS+++ Y S+ +S
Sbjct: 18 LSELQKEQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISL--AFYKDY-SNIESI 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG+GAG P + L I P+ KVT+++S+NKR FL L + V
Sbjct: 75 C-------DVGSGAGFPSIPLKILYPNLKVTIVDSLNKRIKFLNLVKDELGLSDCNFVHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +RE +++ ARAVA + +LAE CLPLV+ GG F++ K +EE K +
Sbjct: 128 RAEEFGQNKDYRESFEIVTARAVARLNVLAELCLPLVKKGGYFLSLKAQKAEEETKEAIN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L Q + + +R + K++ TP KYPR GTP K PL
Sbjct: 188 AIKLLGGKLEQDLEFDIEGE--ERHILEIRKAKETPNKYPRKAGTPNKKPL 236
>gi|225377576|ref|ZP_03754797.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
gi|225210552|gb|EEG92906.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
Length = 197
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 128/209 (61%), Gaps = 12/209 (5%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTA+ + +EV+E+H DSL++I + ++D+GTGAG PG+ L
Sbjct: 1 MNLTAITEFDEVIEKHFLDSLSLIKVY----------DLQKEVSVMDMGTGAGFPGIPLK 50
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IA P+ ++TL +S+NKR +FL+ + L ++ + RAE LGK+ +RE++D+ V+RA
Sbjct: 51 IAFPNLRMTLADSLNKRILFLQEVIEKLGLKDIDALHARAEELGKNKEYREKFDLVVSRA 110
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VA + L EYC+P V++GG F++ K + +EEV N++ A L+G + ++ +
Sbjct: 111 VANLSSLEEYCVPFVKIGGNFISYKSGEIEEEVANAKNATFLLGGKMKEVYKFDLYEQ-- 168
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+R+ VV K + TPK YPR GTP K PL
Sbjct: 169 KRSFVVIDKVKGTPKTYPRKAGTPTKTPL 197
>gi|404483750|ref|ZP_11018967.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridiales
bacterium OBRC5-5]
gi|404343109|gb|EJZ69476.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridiales
bacterium OBRC5-5]
Length = 241
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 139/231 (60%), Gaps = 9/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ ++E+++ + + L++ N+ MNLT++ ++ E +H DS+A+ +K+
Sbjct: 19 ISDEKKEKLYKFYEILVEKNKVMNLTSITEIKEFTYKHFIDSIALEKSVKDL-------- 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ N + D+GTGAG PG+ LAI P+ +TL++S+NKR F++ + + NV +
Sbjct: 71 VSKNYNIADMGTGAGFPGIPLAIVYPNLNLTLIDSLNKRIKFIKETCEILDIKNVNAIHS 130
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++ +RE++D+ V+RAVA + L+EYCLPLV++GG F++ K + E+ +++
Sbjct: 131 RAEDIDRNKDYREKFDICVSRAVANLASLSEYCLPLVKIGGSFISYKSKGYEVEIAEAQK 190
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + E +G+R + K + TP KYPR G P K P+
Sbjct: 191 AIKVLGGETGNIEKFE-LGEYGERIFLDIKKIKSTPDKYPRKAGLPTKEPI 240
>gi|225028846|ref|ZP_03718038.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
gi|224953842|gb|EEG35051.1| 16S rRNA methyltransferase GidB [Eubacterium hallii DSM 3353]
Length = 238
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L +Q Q L+ L++ N+ MNLTA+ D +EV+E+H DSL+ + S C
Sbjct: 17 SLTPKQLGQFELFYKMLIETNKSMNLTAITDEDEVIEKHFIDSLSCRRVVDMSQIRTC-- 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+DVGTGAG PG+ L I P+ L++S+NKR FL+ L ++ +
Sbjct: 75 --------IDVGTGAGFPGIPLKIVYPEIDFVLVDSLNKRVKFLKDVKEALGLEGLEALH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE L +D S R +D+ V+RAVA + +L+EYC+P VR G FV+ KG EE+ N++
Sbjct: 127 GRAEDLARDKSLRAAFDLCVSRAVANLSVLSEYCVPFVRTNGYFVSYKGKKGLEEISNAQ 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G + ++ + +R + K + TPK YPR GTP+K PL
Sbjct: 187 NCMNVLGCKIEKVDDFRLEEDEAERLLIRIKKCKGTPKLYPRKAGTPSKNPL 238
>gi|306820324|ref|ZP_07453963.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551653|gb|EFM39605.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 237
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 130/227 (57%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ +Y LL +N K+NLTA+ +++E+ E+H DSL+I+ + H + N
Sbjct: 23 EKFDIYTQNLLSYNEKVNLTAITNIDEIYEKHYLDSLSILKYV------HLEQ----NSS 72
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + + I D + +L+S+ KR VFLE +S L + RAE L
Sbjct: 73 IIDVGTGAGFPSIPMKIFREDINLCMLDSLAKRVVFLEDMISKLSLKKSTALHARAEDLA 132
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+ +RE +D AV+RAVA + L EYC+P V+ GG + KG EE++NS+ A++L+
Sbjct: 133 QKKDYRENFDYAVSRAVANLSTLCEYCIPFVKKGGFLICLKGQSVDEEIENSKNAMKLLN 192
Query: 245 ASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ + VE PF + +V K TPK YPR GTP+K PL
Sbjct: 193 CSIKEKIDVE--IPFSDLKHNIIVIQKHGATPKAYPRKSGTPSKNPL 237
>gi|421766903|ref|ZP_16203671.1| rRNA small subunit 7-methylguanosine methyltransferase GidB
[Lactococcus garvieae DCC43]
gi|407624699|gb|EKF51434.1| rRNA small subunit 7-methylguanosine methyltransferase GidB
[Lactococcus garvieae DCC43]
Length = 237
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 139/232 (59%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ + EV +H DS+A PI +
Sbjct: 17 LSQQQKEQFERYFELLVEWNEKINLTAITEKKEVFLKHFYDSIA---PILYKLIN----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +K++D+G GAG P L + I P+ +VT+++S+NKR FL + L ++ ++ G
Sbjct: 69 -NEAIKILDIGAGAGFPSLPIKIIFPELQVTIIDSLNKRINFLSLLANELGLDHITLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D+++R Q+D+ ARAVA + +L+E +P ++ G ++ K EE+ +++
Sbjct: 128 RAEDFGQDLTYRGQFDIVTARAVARLSVLSELTIPFLKKNGRLLSLKAAKFDEELSDAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G+ ++ ++ Q P G +R + K + TPKKYPR GTP K PL
Sbjct: 188 AIAVLGSKFIE--QIDYQLPNGDERHIAIIEKKKETPKKYPRKAGTPNKKPL 237
>gi|304318131|ref|YP_003853276.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779633|gb|ADL70192.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 240
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 128/225 (56%), Gaps = 10/225 (4%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
EQ Y D LL+WN+KMNLTA+ + +V+ +H DSL T+ N N +
Sbjct: 26 EQFIKYYDLLLEWNQKMNLTAITEERDVVVKHFLDSL----------TAKICKKINGNER 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVG GAG P + L I P K+T+++S+ KR VFL V L +V+I+ GRAE LG
Sbjct: 76 IIDVGAGAGFPSIPLKILYPSLKLTIVDSLKKRTVFLNELVQQLHLNDVEIIHGRAEDLG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD S RE++D++++RAVA++ IL EYC+P V+V G +A KG + EE+ S A+ +
Sbjct: 136 KDNSLREKFDISLSRAVAQLNILLEYCIPFVKVDGYLIAFKGSNVDEEIAMSNNALNTLK 195
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + + V ++ K T KYPR P K+PL
Sbjct: 196 SQIENIFEVTLPYTDIIHKLLLIRKLGTTDMKYPRKPKLIEKMPL 240
>gi|402309494|ref|ZP_10828487.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. AS15]
gi|400372461|gb|EJP25405.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. AS15]
Length = 237
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 131/227 (57%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ +Y LL +N K+NLTA+ +++E+ E+H DSL+I+ + H + N
Sbjct: 23 EKFDIYTQNLLSYNEKVNLTAITNIDEIYEKHYLDSLSILKYV------HLEQ----NSS 72
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + + I D + +L+S+ KR VFLE +S L + RAE L
Sbjct: 73 IIDVGTGAGFPSIPMKILREDINLCMLDSLTKRVVFLEDMISKLSLKKSTALHARAEDLA 132
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
++ +RE +D AV+RAVA + L EYC+P V+ G + KG EE++NS+ A++L+
Sbjct: 133 QNKDYRENFDYAVSRAVANLSTLCEYCIPFVKKDGFLICLKGQSVDEEIENSKNAMKLLN 192
Query: 245 ASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ + VE PF + +V K+ TPK YPR GTP+K PL
Sbjct: 193 CSIKEKIDVE--IPFSDLKHNIIVIQKNGATPKAYPRKSGTPSKNPL 237
>gi|225867913|ref|YP_002743861.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
gi|259495620|sp|C0MG47.1|RSMG_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225701189|emb|CAW98104.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
Length = 237
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q+EQ Y L+ WNRK+NLTA+ + NEV +H DS+A P+ Y
Sbjct: 16 ALTNHQKEQFDTYFKLLIDWNRKINLTAITEENEVYLKHFYDSVA---PLLQGYIP---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N L+L+D+G GAG P + + I P VT+++S+NKR FL+ L V
Sbjct: 69 --NEPLRLLDIGAGAGFPSIPMKIMFPKLDVTIIDSLNKRIQFLQLLAKELGLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D FR Q+D+ ARAVA M+IL+E +P +++ G +A K +E++ ++
Sbjct: 127 GRAEDFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+QL+ A +L Q P G R + K + TP KYPR G P K PL
Sbjct: 187 KALQLLFAKVLD--HQPYQLPNGDARYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|347526265|ref|YP_004833013.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 27782]
gi|345285224|gb|AEN79077.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 27782]
Length = 246
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y + L+ N +NLTA+ +EV +H DSL +K+ T
Sbjct: 18 LSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTE----- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L DVG GAG P + + IA P+ KVT+++S+NKR FL L V+ G
Sbjct: 73 ---ALTLCDVGAGAGFPSIPMKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHG 129
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK RE YDV ARAVA + +L+EYCLPL RVGG F+A K ++E++++E
Sbjct: 130 RAEEFAGKKSKHRESYDVVTARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAE 189
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G L+ R + K R+TPKKYPR GTPAK+PL
Sbjct: 190 YAIESLGGKLVDDAVFHLPETDDVRHIITIEKIRQTPKKYPRKAGTPAKMPL 241
>gi|406671615|ref|ZP_11078854.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
hominis CCUG 36813]
gi|405580865|gb|EKB54924.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
hominis CCUG 36813]
Length = 241
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 136/234 (58%), Gaps = 13/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ Q Q Y L++WN+K+NLTA+ EV +H DSL + + SY
Sbjct: 17 LSKDQLNQFDRYYQLLVEWNQKINLTAITQREEVYLKHFYDSLICLWQMPLESY------ 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+KL DVG GAG P L L I P+ KVT+++S+ KR FLE VS +L NV+I+
Sbjct: 71 ----QIKLCDVGAGAGFPSLPLKIVRPELKVTIVDSLKKRTHFLELLVSELKLDNVEIIH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKN 235
RAE G RE +D+ ARAVA + L+EYCLPLV +GG F+A KG + QEE+
Sbjct: 127 ARAEDFGHLEKQRESFDLVTARAVARLNTLSEYCLPLVSLGGNFLALKGDWNLCQEELNE 186
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++RA+ ++G ++Q + G+R+ ++ K +TPKKYPR G P+K P+
Sbjct: 187 AKRALNILGGRVVQSNYCQLPENQGERSFLLINKVEKTPKKYPRQAGKPSKQPI 240
>gi|333898200|ref|YP_004472074.1| ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333113465|gb|AEF18402.1| Ribosomal RNA small subunit methyltransferase G
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 240
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 128/231 (55%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN EQ Y D LL+WN KMNLTA+ + E++ +H DSL + C
Sbjct: 20 LNMFHVEQFLKYSDLLLEWNEKMNLTAITEEREIIIKHFLDSLTALK---------CKVI 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S +++DVG GAG P + L I P K+T+++S+ KR VFL+ VS L +V+I+ G
Sbjct: 71 KGSE-RIIDVGAGAGFPSVPLKILYPSLKLTIVDSLKKRTVFLDELVSYLNLKDVEIIHG 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LGKD RE+YD++++RAVA++ +L EYC+P +V G +A KG + EE+ S+
Sbjct: 130 RAEDLGKDSGLREKYDISLSRAVAQLNVLVEYCIPFTKVDGYLIAYKGSNTDEEIAASQN 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++ + + V V+ K T KYPR P K PL
Sbjct: 190 ALNVLRCQVENVLDVTLPYTDIHHKLVLIKKLDATDSKYPRKPKLIEKSPL 240
>gi|414564731|ref|YP_006043692.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847796|gb|AEJ26008.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 237
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q+EQ Y L+ WNRK+NLTA+ + NEV +H DS+A P+ Y
Sbjct: 16 ALTNHQKEQFDTYFKLLIDWNRKINLTAITEENEVYLKHFYDSVA---PLLQGYIP---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N L+L+D+G GAG P + + I P VT+++S+NKR FL+ L V
Sbjct: 69 --NEPLRLLDIGAGAGFPSIPMKIMFPKLDVTIIDSLNKRIHFLQLLAKELGLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D FR Q+D+ ARAVA M+IL+E +P +++ G +A K +E++ ++
Sbjct: 127 GRAEDFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+QL+ A +L Q P G R + K + TP KYPR G P K PL
Sbjct: 187 KALQLLFAKVLD--HQPYQLPNGDGRYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|417973263|ref|ZP_12614127.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 25644]
gi|346330384|gb|EGX98639.1| 16S rRNA methyltransferase GidB [Lactobacillus ruminis ATCC 25644]
Length = 245
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y + L+ N +NLTA+ +EV +H DSL +K+ T
Sbjct: 17 LSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTE----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L DVG GAG P + + IA P+ KVT+++S+NKR FL L V+ G
Sbjct: 72 ---ALTLCDVGAGAGFPSIPMKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHG 128
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK RE YDV ARAVA + +L+EYCLPL RVGG F+A K ++E++++E
Sbjct: 129 RAEEFAGKKSRHRESYDVVTARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAE 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G L+ R + K R+TPKKYPR GTPAK+PL
Sbjct: 189 YAIESLGGKLVDDAVFHLPETDDVRHIITIEKIRQTPKKYPRKAGTPAKMPL 240
>gi|116627232|ref|YP_819851.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMD-9]
gi|122268165|sp|Q03MB7.1|RSMG_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116100509|gb|ABJ65655.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus thermophilus
LMD-9]
Length = 237
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++L+D+G GAG P L + I CP+ VT+++S+N+R FL L V G
Sbjct: 69 -NQSIQLLDIGAGAGFPSLPIKILCPNLDVTIIDSLNRRITFLNFLSDELGLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K +E+ ++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADQELVDARN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNVLFAK--PILNENYKLPNGDGRNITIIDKKKETPNKYPRRAGIPNKKPL 237
>gi|326793314|ref|YP_004311135.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
gi|326544078|gb|ADZ85937.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
Length = 238
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 133/233 (57%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L +WN KMNLTA+ + EVM +H D + I I
Sbjct: 16 LTETQLNQFMMYKSLLQEWNEKMNLTAITEDREVMTKHFLDCMTIQKAI----------D 65
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N+ ++D+GTGAG PGLV+ IA P ++TL++++ KR FLE ++ L ++ +
Sbjct: 66 MNTQKTVIDIGTGAGFPGLVIKIAFPHLELTLVDALKKRLTFLEEVINQLGLKGIKCIHS 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LGK+ ++RE +D+ +RAVA + +L+EY LP V++ G +A KG +EE++ ++
Sbjct: 126 RAEDLGKNKAYREGFDICASRAVANLAVLSEYTLPFVKIDGYLMALKGQKIEEELEQGKK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCL--KSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ + + PF + + K + T KYPR G P K PL
Sbjct: 186 AIKILGGQLEEV--IHAGVPFTELDHKIAKIRKVKPTATKYPRKAGEPTKAPL 236
>gi|256751462|ref|ZP_05492340.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
gi|256749681|gb|EEU62707.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
Length = 240
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 133/227 (58%), Gaps = 14/227 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E Y LL+WN+KMNLTA+ + +EV+ +H DSL+++ K
Sbjct: 26 EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVK----------SGKIKEEEK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L I P K TLL+S KR FLE ++ + ++++ GRAE +G
Sbjct: 76 IIDVGTGAGFPCIPLKIVFPKLKATLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD+ +REQ+D+++ARAVA + IL EY LP V+V G F+A KG + +EE++N+++A++ +
Sbjct: 136 KDIKYREQFDLSMARAVAPLNILLEYTLPFVKVDGYFIALKGREIEEEIENTQKALRELK 195
Query: 245 ASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ + + P+ ++ K + P KYPR + PL
Sbjct: 196 GKIEEVREI--RLPYSDIVHHLIIIKKVDKCPTKYPRRANAIQRSPL 240
>gi|323340452|ref|ZP_08080708.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
gi|323092141|gb|EFZ34757.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
Length = 246
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y + L+ N +NLTA+ +EV +H DSL +K+ T
Sbjct: 18 LSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTE----- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L DVG GAG P + + IA P+ KVT+++S+NKR FL L V+ G
Sbjct: 73 ---ALTLCDVGAGAGFPSIPMKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHG 129
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK RE YDV ARAVA + +L+EYCLPL RVGG F+A K ++E++++E
Sbjct: 130 RAEEFAGKKSRHRESYDVVTARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAE 189
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G L+ R + K R+TPKKYPR GTPAK+PL
Sbjct: 190 YAIESLGGKLVDDAVFHLPETDDVRHIITIEKIRQTPKKYPRKAGTPAKMPL 241
>gi|377810330|ref|YP_005005551.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pediococcus
claussenii ATCC BAA-344]
gi|361057071|gb|AEV95875.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pediococcus
claussenii ATCC BAA-344]
Length = 242
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q +Y + L+ N +NLTA+ D +V +H DS + P+ + T DS+
Sbjct: 17 LSDKQMKQFEVYFEFLIATNENVNLTAITDKKDVYLKHFYDS---VTPLLETPTYFADSA 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ DVG GAG P L + I PD K+T++++++KR FL V+ L ++ ++
Sbjct: 74 S-----ICDVGAGAGFPSLPIKILRPDLKITIVDALSKRITFLNELVAKLNLTDIALIHD 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G K +R Q+DV ARAVA + +L+E C+PL ++ G F+A K + + E+ E
Sbjct: 129 RAETFGNKRSEYRGQFDVVTARAVARLSVLSELCIPLAKIDGYFIALKAANSETELSEGE 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G +++ E R +V K+R+TP KYPR PGTP K P+
Sbjct: 189 EAISVLGGKVIENRQFELPVDGDIRNLIVVNKTRQTPNKYPRKPGTPNKEPI 240
>gi|50913652|ref|YP_059624.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10394]
gi|73919635|sp|Q5XDS2.1|RSMG_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50902726|gb|AAT86441.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 237
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 134/233 (57%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+++Q+EQ Y L++WN K+NLTA+ + NEV +H DS+A PI + +
Sbjct: 16 SLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIA---PILQGFLA---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P+ +VT+++S+NKR FL L NV
Sbjct: 69 --NEPIKLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRISFLTLLAQELGLENVHFFH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+D ARAVA M++L+E +P +++ G +A K +E++ ++
Sbjct: 127 GRAEDFGQDKAFRGQFDAVTARAVARMQVLSELTIPFLKIRGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ +++ S Q P G R + K + TP KYPR G P K PL
Sbjct: 187 NALCLLFGKVIKNHSY--QLPNGDSRFITIVEKKKETPNKYPRKAGLPNKKPL 237
>gi|422852180|ref|ZP_16898850.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
gi|325694167|gb|EGD36085.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
Length = 237
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LNDRQKDQFGRYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEEIGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLKVGGKLLALKASNAPEELAEAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVQD--NLSYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|452974092|gb|EME73914.1| 16S rRNA methyltransferase GidB [Bacillus sonorensis L12]
Length = 239
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q EQ Y + L++WN K+NLT++ + EV +H DS+ + + + D
Sbjct: 16 SLSPFQLEQFETYYEWLIEWNDKINLTSITEKKEVYLKHFYDSI--------TASFYIDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+NL DVG GAG P L + I P VT+++S+NKR FL + +L N +
Sbjct: 68 QKVNNL--CDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRINFLNELSNALKLENTEFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +DV ARAVA + +L+E CLPLV+ GLFVA K EE++ +
Sbjct: 126 DRAETFGRLKDKRESFDVVTARAVARLSVLSELCLPLVKKNGLFVALKAASADEEIEAGK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++ +G + + S + +R +V K +TPKK+PR PGTP K P+
Sbjct: 186 KAIKTLGGQIETVHSFQLPIEESERNIIVIKKQSQTPKKFPRKPGTPNKSPI 237
>gi|404369603|ref|ZP_10974937.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
gi|226914453|gb|EEH99654.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
Length = 239
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCD 116
L+ Q EQ Y+ L +WN K+NLTA+ + EV+++H D + IKN+ T
Sbjct: 18 LSEHQYEQFIKYMRLLQEWNEKINLTAITEDEEVIKKHFIDCIKAFKSDAIKNAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI P+ ++TLL+S+NKR FL ++ L NV +
Sbjct: 74 --------IIDVGTGAGFPGLPIAIMNPNVQITLLDSLNKRINFLNTVINNIGLKNVITI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE++DVA +RAVA M +L+E+C+P ++VGG FVA KG +EE+K+
Sbjct: 126 HSRAEDGARKPELREKFDVATSRAVANMAVLSEFCMPYIKVGGHFVALKGPAIEEEIKDG 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G L ++ V + + V K + K YPR GT K P+
Sbjct: 186 HKAIAVLGGELKEIIEVNIEESDLKHNIVEIKKINKCSKVYPRKAGTINKKPI 238
>gi|225871173|ref|YP_002747120.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp. equi
4047]
gi|254766903|sp|C0M821.1|RSMG_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225700577|emb|CAW95086.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
Length = 237
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q+EQ Y L+ WNRK+NLTA+ + NEV +H DS+A P+ Y
Sbjct: 16 ALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVA---PLLQGYIP---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N L+L+D+G GAG P + + I P VT+++S+NKR FL+ L V
Sbjct: 69 --NEPLRLLDIGAGAGFPSIPMKIMFPKLDVTIIDSLNKRIHFLQLLAKELGLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D FR Q+D+ ARAVA M+IL+E +P +++ G +A K +E++ ++
Sbjct: 127 GRAEDFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+QL+ A +L Q P G R + K + TP KYPR G P K PL
Sbjct: 187 KALQLLFAKVLD--HQPYQLPNGDGRYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|195978770|ref|YP_002124014.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689834|sp|B4U4T4.1|RSMG_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|195975475|gb|ACG63001.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 237
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q+EQ Y L+ WNRK+NLTA+ + NEV +H DS+A P+ Y
Sbjct: 16 ALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVA---PLLQGYIP---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N L+L+D+G GAG P + + I P VT+++S+NKR FL+ L V
Sbjct: 69 --NEPLRLLDIGAGAGFPSIPMKIMFPKLDVTIIDSLNKRIHFLQLLAKELGLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D FR Q+D+ ARAVA M+IL+E +P +++ G +A K +E++ ++
Sbjct: 127 GRAEDFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIKGKLIALKAQAADQELEEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+QL+ A +L Q P G R + K + TP KYPR G P K PL
Sbjct: 187 KALQLLFAKVLD--HQPYQLPNGDGRYITLVEKKKETPNKYPRKAGIPNKKPL 237
>gi|419719356|ref|ZP_14246639.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnoanaerobaculum saburreum F0468]
gi|383304469|gb|EIC95871.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Lachnoanaerobaculum saburreum F0468]
Length = 241
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 144/247 (58%), Gaps = 13/247 (5%)
Query: 43 KTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA 102
K L+ + I+++ L+ ++E+++ + L++ N+ MNLT++ D+ E +H DS+A
Sbjct: 7 KYLSESNILDT----VLSDEKKEKLYRFYKILIEKNKVMNLTSITDIRECTYKHFIDSIA 62
Query: 103 IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLE 162
I +K+ + D+GTGAG PG+ LAI P+ ++ L++S+NKR F++
Sbjct: 63 IEKLVKDI--------GEREYSVADLGTGAGFPGIPLAIVFPNLRLDLIDSLNKRVKFIQ 114
Query: 163 HAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFV 222
+L NV + RAE + KD +RE++D+ V+RAVA + L+EYCLPLV+VGG F+
Sbjct: 115 EVCEALELKNVTAIHSRAEDIAKDKKYREKFDICVSRAVANLASLSEYCLPLVKVGGSFI 174
Query: 223 AAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 282
+ K EV ++++A+Q++G + + + +G+R + K + T KYPR G
Sbjct: 175 SYKSKGFDVEVNDAKKAIQVLGGEISDSIKFK-LAEYGERILLDIKKVKPTASKYPRKAG 233
Query: 283 TPAKVPL 289
P K P+
Sbjct: 234 LPTKEPI 240
>gi|374338629|ref|YP_005095345.1| methyltransferase GidB [Streptococcus macedonicus ACA-DC 198]
gi|372284745|emb|CCF03037.1| Methyltransferase GidB [Streptococcus macedonicus ACA-DC 198]
Length = 244
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 13/235 (5%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE +T Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 22 FELTDT-QKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT--- 75
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
N ++L+D+G GAG P + + I CPD VT+++S+NKR FL L V
Sbjct: 76 ----NQAIRLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNSLADELGLEGVHF 131
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE G+D FR YD+ ARAVA ++IL E +P ++VGG +A K +EE+ +
Sbjct: 132 YHGRAEDFGQDKHFRASYDIVTARAVARLQILTELTIPFLKVGGQLIALKASAAEEELAD 191
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++ + L+ + + P G + L K + TP KYPR G P K PL
Sbjct: 192 AKNAMTILFSKLID--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|222525733|ref|YP_002570204.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
gi|222449612|gb|ACM53878.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
Length = 442
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 152/287 (52%), Gaps = 21/287 (7%)
Query: 5 RCGVSVPIVFHLPFSARTLIKHLPSSNQNTFCPHRTRAKTLTTTRIVNSSHFETLNTRQQ 64
R P+ + LP + I P S++ + T R + +LN Q
Sbjct: 175 RLATGRPVRYQLPDAVLDYITRPPVSSRGSMT-----NSTAHLLRKTTADWGLSLNDHQL 229
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
Q Y+D L+ WN + NLTAV+D ++ RH+ DSL + + + DS
Sbjct: 230 AQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWL----ARVWETPPDS------- 278
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
L+D+G+GAG P L L I P VTL+E+ K+ FL H + QL N++++ R ET+G
Sbjct: 279 LIDIGSGAGFPALPLKILYPALPVTLVEATGKKATFLRHVIDCLQLHNIRVLNERIETVG 338
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
++ + RE Y V ARAVAE+R+L EY LPL+R+GG +A KG P+ E+ ++ A+ L+G
Sbjct: 339 QNPTEREHYQVVTARAVAELRVLLEYALPLLRLGGHLLAPKGRHPEVEIAAAQNALALLG 398
Query: 245 ASLLQLCSVE--SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ VE + P R+ V+ K+ TP ++PR G PA+ PL
Sbjct: 399 GEVSACLPVEIPDEEP---RSLVIVTKTAPTPNRFPRAVGIPARRPL 442
>gi|375089988|ref|ZP_09736310.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
languida CCUG 37842]
gi|374566274|gb|EHR37521.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Facklamia
languida CCUG 37842]
Length = 241
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 134/233 (57%), Gaps = 11/233 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y L+ N+K+NLTA+ D EV +H DSL ++ + D
Sbjct: 17 LSQQQIDQFDRYYQRLIDENQKVNLTAITDRKEVYLKHFFDSLTVL------WQEPFD-- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ +KL DVG GAG PG+ L + P+ ++T+++S+NKR FL L + +V G
Sbjct: 69 -HYQMKLCDVGAGAGFPGIPLKLIHPEIELTIVDSLNKRINFLHQVQEDLGLQGLHLVHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKNS 236
RAE +G++ ++R Q+D+ ARAVA + ILAEYCLPLVR GG F+A KG QEEV
Sbjct: 128 RAEDVGQNPAYRGQFDLVTARAVASLDILAEYCLPLVRKGGYFIALKGGHQQTQEEVAAG 187
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A++ +G L + G+R+ V K+ TP KYPR G P+K P+
Sbjct: 188 QVAIKTLGGKLEGVQCYHLPHQAGERSLVKVQKTLDTPNKYPRKAGKPSKQPI 240
>gi|255527594|ref|ZP_05394458.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296186792|ref|ZP_06855193.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
gi|255508727|gb|EET85103.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296048506|gb|EFG87939.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
Length = 239
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCD 116
N + Y D + WN K+NLTA+ D ++ ++H D + I P+K +
Sbjct: 18 FNEDTYNKFSQYKDMIKVWNEKINLTAIVDDEQIFKKHFIDCIKIFKFSPLKQAKN---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++D+GTGAG PG+ + I + + LL+S+NKR FL VS L NV+ +
Sbjct: 74 --------VIDIGTGAGFPGIPIKIMKQELNLILLDSLNKRINFLNEVVSKINLNNVETI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE + +REQ DVAV+RAVA + +L+E C+P V+VGG FVA KG +E+K+
Sbjct: 126 HGRAEDFSRQPKYREQVDVAVSRAVANLAVLSELCIPYVKVGGYFVAMKGPSVDDEIKDG 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+RA+ ++G + + + + V+ K + TPK YPR GT +K PL
Sbjct: 186 KRAISILGGKIDDIIKINIEDSDLDHNLVIIKKVKETPKAYPRKAGTASKKPL 238
>gi|148656341|ref|YP_001276546.1| 16S rRNA methyltransferase GidB [Roseiflexus sp. RS-1]
gi|189040818|sp|A5UVE3.1|RSMG_ROSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148568451|gb|ABQ90596.1| methyltransferase GidB [Roseiflexus sp. RS-1]
Length = 234
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 132/233 (56%), Gaps = 16/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ RQ EQ Y L WN ++NLTA+ D ++ RH DSL S D+
Sbjct: 15 LDQRQIEQFARYSAELRAWNTRVNLTAITDEEGIVARHFLDSL-------RCALSWGDAP 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L+D+G+GAG PGL L I P+ +V L+ES+ K+ FL H +++ L +V ++
Sbjct: 68 SS----LIDIGSGAGFPGLPLKILRPELRVALVESVGKKAAFLRHMITVLDLRDVTVLTA 123
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET+G+D REQYDV ARAVAE+ LAEYCLPL RV G +A KG D +EV +
Sbjct: 124 RAETVGRDPQHREQYDVVTARAVAELATLAEYCLPLCRVHGRVLAPKGSDIADEVARART 183
Query: 239 AVQLMGASLLQL--CSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G ++ + ++ P RT VV K T YPR G PA+ P+
Sbjct: 184 AIERLGGRVIDVEPVTIPGVEP---RTLVVIAKVAPTLAAYPRAVGVPARRPI 233
>gi|306825496|ref|ZP_07458836.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432434|gb|EFM35410.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 245
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIQ----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 77 -NENIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELNLDGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ S+
Sbjct: 136 RAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLESKN 195
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR PG P K PL
Sbjct: 196 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKPGMPNKRPL 245
>gi|315640393|ref|ZP_07895506.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
gi|315483849|gb|EFU74332.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
Length = 238
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q Y + L++WN K+NLTA+ + EV +H DS+ + +++ D+
Sbjct: 17 LTDEQMYQFKRYFELLVEWNEKINLTAITEEKEVYLKHFYDSILL------AFSEDFDA- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L DVG+GAG P + L I P +VT+++S+NKR FL V L V +
Sbjct: 70 ---NASLCDVGSGAGFPSIPLKIVFPTLQVTIVDSLNKRITFLNELVQELGLEQVSLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ FRE +D ARAVA + +L+E CLPLV+ GG+F A K +EE+ ++
Sbjct: 127 RAETFGQNRDFRESFDYVTARAVARLNVLSELCLPLVKKGGVFYALKATKAEEELVEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + + R VV K + TPKKYPR PG P K P+
Sbjct: 187 AIAQLGGKFKEDVVMTLPITGDTRHFVVIEKKKETPKKYPRKPGLPNKQPI 237
>gi|125717463|ref|YP_001034596.1| 16S rRNA methyltransferase GidB [Streptococcus sanguinis SK36]
gi|166224624|sp|A3CLJ1.1|RSMG_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125497380|gb|ABN44046.1| Methyltransferase gidB, putative [Streptococcus sanguinis SK36]
Length = 237
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|323352787|ref|ZP_08087757.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
gi|322121823|gb|EFX93569.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
Length = 237
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELSLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|82523806|emb|CAI78549.1| hypothetical protein [uncultured Chloroflexi bacterium]
Length = 262
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q + + Y L+QWN ++NLTA++ E+ +H DSL + ++ +
Sbjct: 41 LNAAQLDALARYEQELIQWNARINLTAIRHPQEIRTKHFLDSLTCLLALRETPPE----- 95
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+LVDVGTGAG PG+ L + P ++TL+ES+ K+ F H V L V++++G
Sbjct: 96 -----RLVDVGTGAGFPGIPLKVIYPKMQLTLVESVGKKAEFCRHVVRTLSLTGVEVIQG 150
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAETLG+ RE++D AVARAVA + +LAEY LPLVRVGG +A KG E +E
Sbjct: 151 RAETLGQSPEHREKFDWAVARAVAILPVLAEYLLPLVRVGGGMLAMKGESGPAEAHAAEH 210
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L QL V +R VV K TP YPR G PAK PL
Sbjct: 211 ALRLLGGHLRQLVPVTLPGVVEERYLVVVDKIAATPTIYPRRVGLPAKKPL 261
>gi|322373911|ref|ZP_08048446.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
gi|321277283|gb|EFX54353.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
Length = 237
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 132/233 (56%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ +Q++Q Y + L++WN K+NLTA+ D N+V +H DSLA P+ +
Sbjct: 16 NLSQQQKDQFQRYFELLVEWNEKINLTAITDKNDVYLKHFYDSLA---PVLQGHIK---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +++L+D+G GAG P L + I CP +VT+++S+NKR FL QL V
Sbjct: 69 --NQDIRLLDIGAGAGFPSLPMKILCPKLEVTIIDSLNKRINFLNLLADELQLSGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D SFR Q+DV ARAVA ++IL+E +P ++VGG +A K EE+ ++
Sbjct: 127 GRAEDFGQDKSFRAQFDVVTARAVARLQILSELTIPFLKVGGQLIALKAAAADEELAEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + P G R + K + TP KYPR G P K PL
Sbjct: 187 NALNLLFAK--PILNDNYHLPNGDGRHITIVEKKKETPNKYPRRAGMPNKKPL 237
>gi|417916126|ref|ZP_12559717.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus mitis
bv. 2 str. SK95]
gi|342831241|gb|EGU65562.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus mitis
bv. 2 str. SK95]
Length = 237
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA MR+L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDVVTARAVARMRVLSELTIPYLKVGGKLLALKASNAPEELSEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|392988248|ref|YP_006486841.1| 16S rRNA methyltransferase GidB [Enterococcus hirae ATCC 9790]
gi|392335668|gb|AFM69950.1| 16S rRNA methyltransferase GidB [Enterococcus hirae ATCC 9790]
Length = 237
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 131/233 (56%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q Y L++WN KMNLTA+ + N+V +H DSL T +
Sbjct: 17 LSDQQMSQFERYYQWLVEWNEKMNLTAITEKNDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV-- 176
+ L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+ L +
Sbjct: 67 FSQPLSLCDVGSGAGFPSIPLKIAFPNLQITIVDSLNKRINFL---TELTKELGITAALH 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPLV+ G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLVKQEGYFYALKAAKSEEELIEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ ++G ++ ++E +R +V K + TPKKYPR PG P K P+
Sbjct: 184 KHAIAILGGKFIKEDAIELPKISDKRHILVIQKKKVTPKKYPRKPGMPNKQPI 236
>gi|433656314|ref|YP_007300022.1| 16S rRNA m(7)G-527 methyltransferase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433294503|gb|AGB20325.1| 16S rRNA m(7)G-527 methyltransferase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 240
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 128/225 (56%), Gaps = 10/225 (4%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
EQ Y D LL+WN+KMNLTA+ + ++V+ +H DSL T+ N N +
Sbjct: 26 EQFMKYYDLLLEWNQKMNLTAITEESDVVVKHFLDSL----------TAKICKKINGNER 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVG GAG P + L I P K+T+++S+ KR VFL V L +V+I+ GRAE LG
Sbjct: 76 IIDVGAGAGFPSIPLKILYPSLKLTIVDSLKKRTVFLNELVQQLHLNDVEIIHGRAEDLG 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD S RE++D++++RAVA++ IL EYC+P V+V G +A KG + EE+ S A+ +
Sbjct: 136 KDNSLREKFDISLSRAVAQLNILLEYCIPFVKVDGYLIAFKGSNVDEEIAMSNNALNTLK 195
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + + V ++ K T KYPR K+PL
Sbjct: 196 SQIENIFEVTLPYTDIVHKLLLIRKLGTTDMKYPRKQKLIEKMPL 240
>gi|424835730|ref|ZP_18260389.1| 16S rRNA methyltransferase GidB [Clostridium sporogenes PA 3679]
gi|365977600|gb|EHN13698.1| 16S rRNA methyltransferase GidB [Clostridium sporogenes PA 3679]
Length = 239
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y + + +WN+K+NLTA+ + E++++H D + I K+S S
Sbjct: 18 FNDKKYNQFISYKNLIQEWNKKINLTAIIEDEEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEMTLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P VR GG FVA KG ++E+ ++ +
Sbjct: 128 RAEDYAQEIQHRQRYDIAVSRAVANLAVLSEFCIPFVRKGGYFVAMKGPSVEDEIISATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T KKYPR PG K PL
Sbjct: 188 SIEILGGKIEDIIKIDIEDTDLKHNLVIIKKVKETGKKYPRKPGIIKKNPL 238
>gi|366053543|ref|ZP_09451265.1| 16S rRNA methyltransferase GidB [Lactobacillus suebicus KCTC 3549]
Length = 241
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 133/240 (55%), Gaps = 13/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNS 110
+ H L Q +Q Y + L+ N ++NLT++ + +EV +H DS+ AI+ P
Sbjct: 11 ADHGINLTDHQMQQFQTYYEDLVTGNEQVNLTSITERDEVYLKHFYDSITPAIVSP---- 66
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
N +L L DVG GAG P L + IA P KVT+++++NKR FLE V L
Sbjct: 67 ------QLQNQSLTLCDVGAGAGFPSLPIKIAFPQLKVTIVDALNKRISFLEKLVDHLGL 120
Query: 171 LNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
+V ++ RAET G K +RE +DV ARAVA + +L+E C+PLV V G+F+A K
Sbjct: 121 SDVTLIHDRAETFGAKKSQYREAFDVVTARAVARLSVLSELCIPLVSVSGIFIAMKASQA 180
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E+ ++ AV+++GA + Q + RT +V K TP KYPR PG P K P+
Sbjct: 181 DDEMTAAKHAVEVLGAEVAQTEKLSLPVNNEPRTMIVMNKVTNTPDKYPRRPGVPNKKPI 240
>gi|422853712|ref|ZP_16900376.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
gi|325697023|gb|EGD38910.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
Length = 237
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEKLGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRTQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQD--NLSYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422849224|ref|ZP_16895900.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
gi|325690245|gb|EGD32249.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
Length = 237
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|148381578|ref|YP_001256119.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
3502]
gi|153934180|ref|YP_001385955.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|153936099|ref|YP_001389362.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
gi|166224583|sp|A7FPL8.1|RSMG_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224584|sp|A5I814.1|RSMG_CLOBH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148291062|emb|CAL85199.1| methyltransferase [Clostridium botulinum A str. ATCC 3502]
gi|152930224|gb|ABS35724.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|152932013|gb|ABS37512.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
Length = 239
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q+ Y + + +WN+K+NLTA+ + +E++++H D + I K+S S
Sbjct: 18 FNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNTVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIIKIDIEDTDLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|363898895|ref|ZP_09325413.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB1]
gi|395207920|ref|ZP_10397296.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Oribacterium
sp. ACB8]
gi|361960025|gb|EHL13284.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB1]
gi|394706334|gb|EJF13850.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Oribacterium
sp. ACB8]
Length = 249
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 30 SNQNTFCPHRTRAKTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDV 89
+ ++ FC T +K L L Q +Q + Y L++ N+ MNLTA+ +
Sbjct: 2 AREDFFCRLSTLSKQLGID----------LQEVQLQQFYSYYTLLVEKNKVMNLTAITEE 51
Query: 90 NEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVT 149
++V+ +H DSLA+ K + + S+ + +DVGTGAG PGL + IA P ++
Sbjct: 52 DDVIVKHFIDSLAMA---KLNVSRETFSNWIEGKRCMDVGTGAGFPGLAIKIAFPGISLS 108
Query: 150 LLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAE 209
L +S+ KR FLE V +L V GRAE LGK+ REQYD+ +RAVA + L+E
Sbjct: 109 LSDSLQKRIHFLEEVVQKLELKGVDFHHGRAEDLGKNPELREQYDLVFSRAVANLSTLSE 168
Query: 210 YCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLK 269
Y LP V+ GG F+A K D EE++ ++A+ L+G L ++ R+ ++ K
Sbjct: 169 YDLPFVKKGGYFLAMKSMDISEEMEKGKKAIYLLGGKLEEILEYRLPETDIGRSLLLIQK 228
Query: 270 SRRTPKKYPRDPGTPAKVPL 289
T KKYPR G P+K PL
Sbjct: 229 IENTAKKYPRKAGIPSKEPL 248
>gi|125623940|ref|YP_001032423.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854292|ref|YP_006356536.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166224595|sp|A2RK93.1|RSMG_LACLM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124492748|emb|CAL97703.1| glucose-inhibited division protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070714|gb|ADJ60114.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 238
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 136/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ Y + L++WN K+NLTA+ + NEV +H DS+A PI Y D
Sbjct: 17 LSDKQIEQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVA---PI--LYGLITDQP 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++D+G GAG P L + I P+ +VT+++S+NKR FL L NV ++ G
Sbjct: 72 VS----ILDIGAGAGFPSLPMKIIFPELEVTIIDSLNKRINFLSLLTEELGLENVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D ++R +D ARAVA + +L+E+ +P ++ G ++ K +EE+ ++++
Sbjct: 128 RAEDFGQDSNYRATFDFVTARAVARLSVLSEFTIPFLKKNGNLLSLKAAQFEEELTDAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E P G +R V K + TPKKYPR GTPAK P+
Sbjct: 188 AIAILGGKFIKEIAYE--LPNGDERHIAVIEKKKETPKKYPRKAGTPAKSPI 237
>gi|401682308|ref|ZP_10814202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. AS14]
gi|400184744|gb|EJO18982.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. AS14]
Length = 237
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIG----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQD--NLSYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|323141445|ref|ZP_08076335.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414101|gb|EFY04930.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium
succinatutens YIT 12067]
Length = 239
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 125/227 (55%), Gaps = 12/227 (5%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q EQ Y + L++ N+ MNLTA+ + EV +H+ DSL +Y +
Sbjct: 22 QLEQFSRYYELLVETNKVMNLTAITEPEEVAVKHMVDSLL-------AYEAEMAGKT--- 71
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
L DVGTGAG PG+ L I CP+ KVTL++S+ KR FL+ + + ++ RAE
Sbjct: 72 --LADVGTGAGFPGVPLKIYCPELKVTLIDSLGKRLRFLQQVIEELGVKGIRCEHLRAED 129
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
G+D RE+YD ARAVA + +L+EYCLPL + GG F+A KG EE+ E AV++
Sbjct: 130 AGRDKKHREKYDYVTARAVARLSVLSEYCLPLAKKGGQFIALKGSKFAEEITEGEAAVKI 189
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G +L V+ R + K + TP +YPR GTP K PL
Sbjct: 190 LGGKILSAEPVKLPGLDDGRAIIKIAKIKSTPAQYPRKAGTPEKQPL 236
>gi|374673423|dbj|BAL51314.1| glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis IO-1]
Length = 238
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 135/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y + L++WN K+NLTA+ + NEV +H DS+A PI Y D
Sbjct: 17 LSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PI--LYGLITDQP 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++D+G GAG P L + I P+ KVT+++S+NKR FL L NV ++ G
Sbjct: 72 VS----ILDIGAGAGFPSLPMKIIFPELKVTIIDSLNKRINFLSLLTEELGLENVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D ++R +D ARAVA + +L E+ +P ++ G+ ++ K +EE+ ++++
Sbjct: 128 RAEDFGQDTNYRGTFDFVTARAVARLSVLTEFTIPFLKKNGILLSLKAAQFEEELNDAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G ++ V + P G +R + K + TPKKYPR GTPAK P+
Sbjct: 188 AIATLGGKFIK--EVAYELPNGDERHIALIEKKKETPKKYPRKAGTPAKNPI 237
>gi|417794425|ref|ZP_12441680.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK255]
gi|334269653|gb|EGL88068.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK255]
Length = 237
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NENIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELNLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR PG P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKPGMPNKRPL 237
>gi|262282118|ref|ZP_06059887.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
gi|262262572|gb|EEY81269.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
Length = 237
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEEIGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELDEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|153938497|ref|YP_001392997.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|170754945|ref|YP_001783276.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|384463955|ref|YP_005676550.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
gi|429243931|ref|ZP_19207414.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001628]
gi|166224585|sp|A7GJN7.1|RSMG_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806440|sp|B1IHR7.1|RSMG_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152934393|gb|ABS39891.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|169120157|gb|ACA43993.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|295320972|gb|ADG01350.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
gi|428759059|gb|EKX81449.1| 16S rRNA methyltransferase GidB [Clostridium botulinum CFSAN001628]
Length = 239
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q+ Y + + +WN+K+NLTA+ + +E++++H D + I K+S S
Sbjct: 18 FNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIIKIDIEDTDLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|15673325|ref|NP_267499.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. lactis
Il1403]
gi|281491888|ref|YP_003353868.1| ribosomal rNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|385830871|ref|YP_005868684.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
gi|418038172|ref|ZP_12676514.1| Transferase transferring one-carbon groups [Lactococcus lactis
subsp. cremoris CNCM I-1631]
gi|13878504|sp|Q9CFX1.1|RSMG_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12724325|gb|AAK05441.1|AE006366_10 glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis Il1403]
gi|281375599|gb|ADA65105.1| Ribosomal RNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|326406879|gb|ADZ63950.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
gi|354693666|gb|EHE93414.1| Transferase transferring one-carbon groups [Lactococcus lactis
subsp. cremoris CNCM I-1631]
Length = 238
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 135/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y + L++WN K+NLTA+ + NEV +H DS+A PI Y D
Sbjct: 17 LSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PI--LYGLITDQP 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++D+G GAG P L + I P+ KVT+++S+NKR FL L NV ++ G
Sbjct: 72 VS----ILDIGAGAGFPSLPMKIIFPELKVTIIDSLNKRINFLSLLTEELGLENVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D ++R +D ARAVA + +L E+ +P ++ G+ ++ K +EE+ ++++
Sbjct: 128 RAEDFGQDANYRGTFDFVTARAVARLSVLTEFTIPFLKKNGILLSLKAAQFEEELNDAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G ++ V + P G +R + K + TPKKYPR GTPAK P+
Sbjct: 188 AIATLGGKFIK--EVAYELPNGDERHIALIEKKKETPKKYPRKAGTPAKNPI 237
>gi|456013147|gb|EMF46816.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Planococcus halocryophilus Or1]
Length = 237
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 127/231 (54%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q EQ +Y L++WN KMNLTA+ + + V +H DS+ T+
Sbjct: 17 LTDTQLEQFRIYHKELVEWNDKMNLTAITEQSAVYLKHFYDSI----------TAAFYLD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+K+ DVG GAG P + L I P +VT+++S+NKR FL+H +L VQ V
Sbjct: 67 FTKPMKICDVGAGAGFPSIPLKICFPHIEVTIVDSLNKRIQFLQHLSGELRLTKVQFVHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ + RE YDV ARAVA + +LAE C+PLV+ GG+F A K +E+ ++E+
Sbjct: 127 RAEDFGQS-THRESYDVVTARAVARLSVLAELCVPLVKKGGVFAAMKAATASDELDDAEK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+Q +G L + S +R V K + TPKKYPR G P K P+
Sbjct: 186 ALQKLGVKLEAVHSFLLPIEESERYIQVFKKFKETPKKYPRKAGVPNKSPI 236
>gi|336393873|ref|ZP_08575272.1| 16S rRNA methyltransferase GidB [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 246
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 124/235 (52%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHC 115
L+++Q Q H Y + L+ N++MNLT + EV +H DSL +P ++ + C
Sbjct: 17 LSSQQMAQFHRYFEVLVTVNQQMNLTNITAEPEVYLKHFYDSLTPSFYLPELRTEALTIC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D +G GAG P + L IA P +VT+++S+NKR FL L NV
Sbjct: 77 D-----------IGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNQLAGELDLDNVAF 125
Query: 176 VRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAET G K REQYD+ ARAVA + +L+E CLPLV+ GG FVA KG P E+
Sbjct: 126 YHDRAETFGSKRSEHREQYDLVTARAVARLNVLSELCLPLVKKGGQFVALKGQLPDGELD 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
SE A+ +G L + E R +V K R+TPK YPR G P K PL
Sbjct: 186 ESEYAISKLGGQLNTTAAFELPETGDSRHIIVVDKKRQTPKSYPRRAGVPNKEPL 240
>gi|418977842|ref|ZP_13525651.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK575]
gi|383349389|gb|EID27331.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK575]
Length = 237
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR FL+ L +V G
Sbjct: 69 -NENIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDDVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDLAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--VLPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|386338463|ref|YP_006034632.1| glucose inhibited division protein B [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|334281099|dbj|BAK28673.1| glucose inhibited division protein B [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 244
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 13/235 (5%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE +T Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 22 FELTDT-QKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT--- 75
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
N ++L+D+G GAG P + + I CPD VT+++S+NKR FL L V
Sbjct: 76 ----NQAIRLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLADELGLKGVHF 131
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE G+D FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +
Sbjct: 132 YHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELAD 191
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++ + L+ + + P G + L K + TP KYPR G P K PL
Sbjct: 192 AKNAMTILFSKLID--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|383939019|ref|ZP_09992210.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae SK674]
gi|418972736|ref|ZP_13520805.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383351269|gb|EID29078.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383714073|gb|EID70088.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pseudopneumoniae SK674]
Length = 237
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PIFQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NENIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422821766|ref|ZP_16869959.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
gi|324990717|gb|EGC22653.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
Length = 237
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIG----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELDEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQD--NLSYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422859034|ref|ZP_16905684.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
gi|327458814|gb|EGF05162.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
Length = 237
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LNDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++V G +A K + EE+ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVSGKLLALKASNAPEELDEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQD--NLSYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|159896713|ref|YP_001542960.1| 16S rRNA methyltransferase GidB [Herpetosiphon aurantiacus DSM 785]
gi|159889752|gb|ABX02832.1| methyltransferase GidB [Herpetosiphon aurantiacus DSM 785]
Length = 236
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 138/233 (59%), Gaps = 14/233 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+T Q +++ YV L QW+ +MNL A + E RH+ DS S + C+
Sbjct: 17 TLSTSQIDRLEHYVALLTQWSERMNLVAPSTLPEATRRHLLDSF--------SLATTCEQ 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ S L D+G+GAGLPG+ LAI P+ +V L+ES++K+ FL H QL V +
Sbjct: 69 APAS---LADIGSGAGLPGIPLAILWPETEVLLIESISKKAEFLRHVAQELQLERVLVEV 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE +G++ +RE + + ARAVA + LAEYCLPL +VGG+++A KG + + EV+++E
Sbjct: 126 ERAEVVGRERRWREHFALVTARAVANLATLAEYCLPLCQVGGMWLAPKGFEIEPEVQDAE 185
Query: 238 RAVQLMGASLLQLCSVE-SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G L + +V P R+ VV K TP YPR GTP+K PL
Sbjct: 186 QAITILGGQLRAVYNVTIPAEPV--RSLVVVDKVASTPLTYPRTVGTPSKKPL 236
>gi|325978989|ref|YP_004288705.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178917|emb|CBZ48961.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 244
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 13/235 (5%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE +T Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 22 FELTDT-QKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT--- 75
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
N ++L+D+G GAG P + + I CPD VT+++S+NKR FL L V
Sbjct: 76 ----NQAIRLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLADELGLEGVHF 131
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE G+D FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +
Sbjct: 132 YHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELAD 191
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++ + L+ + + P G + L K + TP KYPR G P K PL
Sbjct: 192 AKNAMTILFSKLID--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|238854396|ref|ZP_04644738.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260665089|ref|ZP_05865939.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|238833018|gb|EEQ25313.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260561143|gb|EEX27117.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
Length = 239
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 135/232 (58%), Gaps = 9/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
LN +Q +Q Y L++ N +NLT + D+ EV +H DSL + + D
Sbjct: 16 ALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSL-------TPFLEYPDL 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++ DVG GAG P + + I P+ ++ +++S+NKR FL + L V+++
Sbjct: 69 FKKGHI--CDVGAGAGFPSIPIKILVPEMQLAIVDSLNKRLKFLADLTADLDLEQVELIH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++ +RE++D+ ARAVA M L+EYCLPLV+ GG F+A KG + E+ +++
Sbjct: 127 GRAEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLVKKGGQFLALKGPKAESELADAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G + S++ +RT ++ K ++TPKKYPR GTP + PL
Sbjct: 187 KAIAVLGGQITATKSLQLPESDEERTLILLNKVKQTPKKYPRQAGTPNRKPL 238
>gi|288906021|ref|YP_003431243.1| Methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|306832061|ref|ZP_07465215.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732747|emb|CBI14321.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|304425500|gb|EFM28618.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 237
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 13/235 (5%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE +T Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 15 FELTDT-QKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT--- 68
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
N ++L+D+G GAG P + + I CPD VT+++S+NKR FL L V
Sbjct: 69 ----NQAIRLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLADELGLKGVHF 124
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE G+D FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +
Sbjct: 125 YHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELAD 184
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++ + L+ + + P G + L K + TP KYPR G P K PL
Sbjct: 185 AKNAMTILFSKLID--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 237
>gi|419707572|ref|ZP_14235055.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
salivarius PS4]
gi|383282722|gb|EIC80703.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
salivarius PS4]
Length = 237
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 132/233 (56%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ +Q++Q Y + L++WN K+NLTA+ D N+V +H DSLA P+ +
Sbjct: 16 NLSQQQKDQFQRYFELLVEWNEKINLTAITDKNDVYLKHFYDSLA---PVLQGHIK---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +++L+D+G GAG P L + I CP +VT+++S+NKR FL QL V
Sbjct: 69 --NQDIRLLDIGAGAGFPSLPMKILCPKLEVTIIDSLNKRINFLNLLADELQLSGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+DV ARAVA ++IL+E +P ++VGG +A K EE+ ++
Sbjct: 127 GRAEDFGQDKAFRAQFDVVTARAVARLQILSELTIPFLKVGGQLIALKAAAADEELAEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + P G R + K + TP KYPR G P K PL
Sbjct: 187 NALNLLFAK--PILNDNYHLPNGDGRHITIVEKKKETPNKYPRRAGMPNKKPL 237
>gi|187777374|ref|ZP_02993847.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
gi|187774302|gb|EDU38104.1| 16S rRNA methyltransferase GidB [Clostridium sporogenes ATCC 15579]
Length = 239
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 136/231 (58%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y + + +WN+K+NLTA+ E++++H D + I K S + S
Sbjct: 18 FNDKKYNQFISYKNLIQEWNKKINLTAIVKDEEIIKKHFIDCIKIF---KASPMAEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++YD+AV+RAVA + +L+E+C+P VR GG FVA KG +EE+ ++ +
Sbjct: 128 RAEDYAQEIQHRQRYDIAVSRAVANLAVLSEFCIPFVRKGGYFVAMKGPSVEEEITSATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T KKYPR P K PL
Sbjct: 188 SIEILGGKIEDIIKIDIEDTDLKHNLVIIKKVKETAKKYPRKPSIIKKNPL 238
>gi|110803383|ref|YP_699902.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
gi|123145823|sp|Q0SPQ5.1|RSMG_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110683884|gb|ABG87254.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
Length = 239
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCD 116
N + ++ LY D L +WN K+NLTA+ + E++++H D + K + T
Sbjct: 18 FNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI D +VTLL+S+NKR FL V+ L NV+ +
Sbjct: 74 --------VIDVGTGAGFPGLPIAIMREDVEVTLLDSLNKRINFLNEVVNKLALKNVETI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S
Sbjct: 126 HSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDS 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L + VE + V+ K + TPK +PR G K PL
Sbjct: 186 KNAIGTLGGKLKGITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|167770825|ref|ZP_02442878.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
gi|167666865|gb|EDS10995.1| 16S rRNA methyltransferase GidB [Anaerotruncus colihominis DSM
17241]
Length = 237
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 138/234 (58%), Gaps = 16/234 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+T Q + Y L++WN KMNLTA+ + E++ +H DSL+++ S C
Sbjct: 17 TLDTAQLDAFDRYAALLVEWNAKMNLTAITEPQEIVIKHFVDSLSLL--------SLC-- 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFL-EHAVSLTQLLNVQIV 176
+LVDVGTGAG P + L IA PD +TLL+S+NKR FL E + SL Q + + +
Sbjct: 67 PIPQGARLVDVGTGAGFPSVPLKIARPDLHLTLLDSLNKRITFLQELSQSLGQ--DNECI 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE G+ +RE+YD+AV+RAVA + L+EYCLP VRV G+F A KG+D +E +
Sbjct: 125 HARAEEAGRSPVYREKYDMAVSRAVARLYELSEYCLPFVRVEGIFAAYKGNDCDKECAEA 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSR-RTPKKYPRDPGTPAKVPL 289
RAV L+G L + + P G A+V +K R +T KYPR AK PL
Sbjct: 185 GRAVHLLGGELKAVKRL--GLPDGSGRAIVLIKKRSQTSTKYPRPHAKIAKNPL 236
>gi|329768827|ref|ZP_08260256.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
gi|328838220|gb|EGF87833.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
Length = 238
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 136/233 (58%), Gaps = 16/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + +++WN+K+NLTA+ + E +H DS+++ Y S+ D+
Sbjct: 19 LSEKQKNQYQRYYELVVEWNQKINLTAITEEEEFYSKHFYDSISL--AFFKDY-SNVDNI 75
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG+GAG P + L I P+ +VT+++S+NKR FL +L N +
Sbjct: 76 C-------DVGSGAGFPSIPLKILYPNLEVTIVDSLNKRIKFLNLLKDELELTNCNFIHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G++ +RE++++ ARAVA + +L+E CLPLVR G F++ K +EE K +
Sbjct: 129 RAEEIGQNRDYREKFEIVTARAVARLNVLSELCLPLVRKNGYFLSLKAQKAEEETKEALN 188
Query: 239 AVQLMGASLLQ--LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L + S+E + +R + K++ TP KYPR GTP K PL
Sbjct: 189 AIKLLGGKLEKDLEFSIEGE----ERHILEIRKAKETPNKYPRKVGTPNKKPL 237
>gi|153956501|ref|YP_001397266.1| 16S rRNA methyltransferase GidB [Clostridium kluyveri DSM 555]
gi|219856804|ref|YP_002473926.1| hypothetical protein CKR_3461 [Clostridium kluyveri NBRC 12016]
gi|189039495|sp|A5N449.1|RSMG_CLOK5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766888|sp|B9DXR9.1|RSMG_CLOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146349359|gb|EDK35895.1| GidB [Clostridium kluyveri DSM 555]
gi|219570528|dbj|BAH08512.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 237
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 130/234 (55%), Gaps = 16/234 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHC 115
N + + Y D L WN KMNLTA+ D +++++H DS+ + P+K++ +
Sbjct: 17 NFNQEKYNKFIKYKDILKLWNDKMNLTAIVDDKDIIKKHFIDSIRVFKFLPLKDAKS--- 73
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
++DVGTGAG PG+ + I P+ K+ LL+S+NKR FL V +L +V
Sbjct: 74 ---------IIDVGTGAGFPGIPIKIIKPEVKLILLDSLNKRIKFLNQVVLSIKLNDVTC 124
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ GRAE + + +RE DV V+RAVA + +L+E+C+P ++VGG F+A KG ++E+
Sbjct: 125 IHGRAEDCARKIEYRENNDVVVSRAVANLTVLSEFCIPYIKVGGYFIAMKGPSVEDEITE 184
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ A+ ++G + + VE VV K T KYPR G +K PL
Sbjct: 185 SKNAINILGGKIEDIIKVEDDE--FNHNLVVIKKITHTSDKYPRKAGIVSKNPL 236
>gi|422825800|ref|ZP_16873979.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
gi|324995236|gb|EGC27148.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
Length = 237
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +LKL+D+G GAG P L + I CP VT+++S+NKR FL+ L V G
Sbjct: 69 -NQDLKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR ++D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAKFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQD--NLNYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|169343470|ref|ZP_02864470.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|182626391|ref|ZP_02954144.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|422347720|ref|ZP_16428631.1| ribosomal RNA small subunit methyltransferase G [Clostridium
perfringens WAL-14572]
gi|422875601|ref|ZP_16922086.1| 16S rRNA methyltransferase GidB [Clostridium perfringens F262]
gi|169298422|gb|EDS80511.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|177908265|gb|EDT70818.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|373223698|gb|EHP46045.1| ribosomal RNA small subunit methyltransferase G [Clostridium
perfringens WAL-14572]
gi|380303483|gb|EIA15786.1| 16S rRNA methyltransferase GidB [Clostridium perfringens F262]
Length = 239
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCD 116
N + ++ LY D L +WN K+NLTA+ + E++++H D + K + T
Sbjct: 18 FNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI D +VTLL+S+NKR FL V+ L NV+ +
Sbjct: 74 --------VIDVGTGAGFPGLPIAIMREDVEVTLLDSLNKRINFLNEVVNKLGLKNVETI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S
Sbjct: 126 HSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDS 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L + VE + V+ K + TPK +PR G K PL
Sbjct: 186 KNAIGTLGGKLKGITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|337752162|ref|YP_004646324.1| protein RsmG [Paenibacillus mucilaginosus KNP414]
gi|336303351|gb|AEI46454.1| RsmG [Paenibacillus mucilaginosus KNP414]
Length = 241
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 10/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H LN Q Q +Y L+ WN +MNLT + + ++V +H DSL++ +
Sbjct: 15 HGIALNEHQLSQFEIYYKELVDWNERMNLTGITERDQVYLKHFFDSLSLAFYV------- 67
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
+ + L D+G+GAG P + L IA P +VT+++S+NKR FL H L NV
Sbjct: 68 ---PVDDHAALADIGSGAGFPSIPLKIAFPHLQVTIVDSLNKRIQFLNHLTMALGLSNVT 124
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V GRAE + + + R++YD+ ARAVA + +L E+CLP V GLFVA KG D +E+K
Sbjct: 125 CVHGRAEDVARGAAHRDRYDLVTARAVARLAVLNEFCLPFTSVDGLFVAMKGQDIGDELK 184
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ R++Q + A +++ R V+ K TP KYPR G P K PL
Sbjct: 185 EAGRSLQELHAKVVETHRFILPIEESVRHLVITKKIDSTPAKYPRKAGLPMKEPL 239
>gi|422741740|ref|ZP_16795763.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
gi|315143570|gb|EFT87586.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
Length = 291
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 121/231 (52%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSL----------AFFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L+NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLVNVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|323487694|ref|ZP_08092952.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
gi|323398428|gb|EGA91216.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
Length = 237
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 125/231 (54%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q EQ +Y L++WN KMNLTA+ + V +H DS+ T+
Sbjct: 17 LTDTQLEQFRIYHKELVEWNDKMNLTAITEQTTVYLKHFYDSI----------TAAFYLD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + DVG GAG P + L I P +VT+++S+NKR FL+H L VQ V
Sbjct: 67 FTKPMNICDVGAGAGFPSIPLKICFPHIEVTIVDSLNKRIQFLQHLSGELGLTKVQFVHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ S RE YDV ARAVA + +LAE C+PLV+ GG+FVA K +E+ ++E+
Sbjct: 127 RAEDFGQS-SHRESYDVVTARAVARLSVLAELCVPLVKKGGVFVAMKAATASDELDDAEK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+Q +G L + S +R V K + TPKKYPR G P K P+
Sbjct: 186 ALQKLGVKLETVHSFLLPIEESERYIQVFKKFKETPKKYPRKAGVPNKSPI 236
>gi|256854949|ref|ZP_05560310.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
gi|256709462|gb|EEU24509.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
Length = 238
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 67 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 127 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 187 AIATLGGQFQKEVGFTLPITVDERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
Length = 240
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ ++ Y D L++WN +NLT++ D ++ +H DSL +
Sbjct: 18 SLDDEAIDRFMAYKDMLIEWNEHINLTSITDDMGIVIKHFIDSL----------LCYSTG 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ +++D+GTGAG PGL L IA P KV L++S+ K+ FL++ + L +V+++
Sbjct: 68 VIRPDARIIDIGTGAGFPGLALKIAFPSLKVCLMDSVQKKLNFLDNVIKALSLEDVELIW 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +RE +DV ARAVA + +LAEYCLP ++GG + KG D E+ ++
Sbjct: 128 GRAEDYACKKGYREAFDVVTARAVASLLVLAEYCLPFAKLGGHVLCMKGPDVDGELVKAD 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++LMG L + E G R VV K RTP YPR G P+K P+
Sbjct: 188 KAIKLMGGRLGDVLRAELPMSGGDRRIVVLDKVTRTPAAYPRRAGIPSKKPI 239
>gi|18311635|ref|NP_563569.1| 16S rRNA methyltransferase GidB [Clostridium perfringens str. 13]
gi|110799944|ref|YP_697343.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|168211560|ref|ZP_02637185.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
gi|20177885|sp|Q8XH32.1|RSMG_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123049536|sp|Q0TLZ7.1|RSMG_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|18146319|dbj|BAB82359.1| glucose-inhibited division protein [Clostridium perfringens str.
13]
gi|110674591|gb|ABG83578.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|170710444|gb|EDT22626.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
Length = 239
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCD 116
N + ++ LY D L +WN K+NLTA+ + E++++H D + K + T
Sbjct: 18 FNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI D +VTLL+S+NKR FL V+ L NV+ +
Sbjct: 74 --------VIDVGTGAGFPGLPIAIMREDVEVTLLDSLNKRINFLNEVVNKLGLKNVKTI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S
Sbjct: 126 HSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDS 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L + VE + V+ K + TPK +PR G K PL
Sbjct: 186 KNAIGTLGGKLKGITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|256618560|ref|ZP_05475406.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|257087803|ref|ZP_05582164.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300861419|ref|ZP_07107503.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
gi|256598087|gb|EEU17263.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|256995833|gb|EEU83135.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300848880|gb|EFK76633.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
Length = 238
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 17 LTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 67 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 127 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 187 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|333396224|ref|ZP_08478041.1| 16S rRNA methyltransferase GidB [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 246
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 124/235 (52%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHC 115
L+++Q Q H Y + L+ N++MNLT + EV +H DSL +P ++ + C
Sbjct: 17 LSSQQMAQFHRYFEVLVTVNQQMNLTNITAEPEVYLKHFYDSLTPSFYLPELRTEALTIC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D +G GAG P + L IA P +VT+++S+NKR FL L NV
Sbjct: 77 D-----------IGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNQLAGELDLDNVAF 125
Query: 176 VRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAET G K REQYD+ ARAVA + +L+E CLPLV+ GG FVA KG P E+
Sbjct: 126 YHDRAETFGSKRSEHREQYDLVTARAVARLNVLSELCLPLVKKGGQFVALKGQLPDGELD 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E A+ +G L + E R +V K R+TPK YPR G P K PL
Sbjct: 186 EAEYAISKLGGQLNTTAAFELPETGDSRHIIVADKKRQTPKSYPRRAGVPNKEPL 240
>gi|228476624|ref|ZP_04061306.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
gi|228251819|gb|EEK10884.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
Length = 237
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CPD VT+++S+NKR FL +L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPDLDVTIIDSLNKRINFLNLLADELELSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ +++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--PILNENYKLPNGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|168218048|ref|ZP_02643673.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
gi|182379950|gb|EDT77429.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
Length = 239
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCD 116
N + ++ LY D L +WN K+NLTA+ + E++++H D + K + T
Sbjct: 18 FNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI D +VTLL+S+NKR FL ++ L NV+ +
Sbjct: 74 --------VIDVGTGAGFPGLPIAIMREDVEVTLLDSLNKRINFLNEVINKLGLKNVETI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S
Sbjct: 126 HSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDS 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L + VE + V+ K + TPK +PR G K PL
Sbjct: 186 KNAIGTLGGKLKGITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|167629163|ref|YP_001679662.1| methyltransferase GidB [Heliobacterium modesticaldum Ice1]
gi|167591903|gb|ABZ83651.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
Length = 257
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y +AL+ N +NLTA+ D + V E+H DS + + N + +DVG
Sbjct: 47 YAEALVATNAHLNLTAITDPDGVAEKHFVDS----------LSPLLLNLPNGPVTAIDVG 96
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PGL LA+ P W+VTLL+S+NKRC FL L NVQI+ GRAE ++
Sbjct: 97 TGAGFPGLPLALIRPQWRVTLLDSLNKRCRFLSETTERLGLTNVQILHGRAEDSARNPLL 156
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
R++Y + V+RAVA + +L E CLP V VGG F+A KG D EV+ ++RA+ L+G L +
Sbjct: 157 RDKYSIVVSRAVARLPVLLELCLPFVTVGGSFIALKGPDGPAEVEEAKRALPLLGGDLEE 216
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ S+ +RT ++ K + T YPR G P + PL
Sbjct: 217 VKSIALPLSGDRRTLIIVRKQKPTDAAYPRKAGIPNRKPL 256
>gi|339640872|ref|ZP_08662316.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. oral taxon 056 str. F0418]
gi|339454141|gb|EGP66756.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. oral taxon 056 str. F0418]
Length = 237
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LDDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQCLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPKLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ S+
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEESKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALTLLFSKVQD--NLSYSLPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|379725066|ref|YP_005317197.1| protein RsmG [Paenibacillus mucilaginosus 3016]
gi|378573738|gb|AFC34048.1| RsmG [Paenibacillus mucilaginosus 3016]
Length = 241
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 10/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H LN Q Q +Y L+ WN +MNLT + + ++V +H DSL++ +
Sbjct: 15 HGIALNEHQLSQFEIYYKELVDWNERMNLTGITERDQVYLKHFFDSLSLAFYV------- 67
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
+ + L D+G+GAG P + L IA P +VT+++S+NKR FL H L NV
Sbjct: 68 ---PVDDHAALADIGSGAGFPSIPLIIAFPHLQVTIVDSLNKRIQFLNHLTMALGLSNVT 124
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V GRAE + + + R+ YD+ ARAVA + +L E+CLP V GLFVA KG D +E+K
Sbjct: 125 CVHGRAEDVARGAAHRDSYDLVTARAVARLAVLNEFCLPFTSVDGLFVAMKGQDIGDELK 184
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ R++Q + A +++ R V+ K TP KYPR G P K PL
Sbjct: 185 EAGRSLQELHAKVVETHRFILPIEESVRHLVITKKIDSTPAKYPRKAGLPMKEPL 239
>gi|417924935|ref|ZP_12568362.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Finegoldia
magna SY403409CC001050417]
gi|341592232|gb|EGS35118.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Finegoldia
magna SY403409CC001050417]
Length = 230
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 134/231 (58%), Gaps = 14/231 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q + + Y+D +L+ N+ MNLTA+ + +H DSL ++ N +
Sbjct: 14 LNDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVL----NLF------D 63
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N K++DVGTGAG P + + IA D K TLL+S+ KR FL+ + QL +++ V
Sbjct: 64 FEENKKIIDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLKDVIDELQLTDIKAVHE 123
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + V +REQYD ++RAV+++ LAE+CLP V+VGG +A KG + +V E
Sbjct: 124 RAEECTRTVEYREQYDYCISRAVSKLDTLAEFCLPFVKVGGYMIAMKGKSDETDV--GEN 181
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + Q +++ + R+ VV K + TPKKYPR G P K PL
Sbjct: 182 AIKILGGKIEQ--TIDYKIDDEDRSLVVIKKIKETPKKYPRGGGKPKKNPL 230
>gi|257088448|ref|ZP_05582809.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|397701420|ref|YP_006539208.1| methyltransferase GidB [Enterococcus faecalis D32]
gi|256997260|gb|EEU83780.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|397338059|gb|AFO45731.1| methyltransferase GidB [Enterococcus faecalis D32]
Length = 238
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 67 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 127 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 187 AIATLGGKFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|168214840|ref|ZP_02640465.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
gi|170713738|gb|EDT25920.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
Length = 239
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCD 116
N + ++ LY D L +WN K+NLTA+ + E++++H D + K + T
Sbjct: 18 FNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI D +VTLL+S+NKR FL V+ L NV+ +
Sbjct: 74 --------VIDVGTGAGFPGLPIAIMRGDVEVTLLDSLNKRINFLNEVVNKLGLKNVETI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S
Sbjct: 126 HSRAEDGARKKELRESFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDS 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L + VE + V+ K + TPK +PR G K PL
Sbjct: 186 KNAIGTLGGKLKGITEVEIEGTDLNHNLVIVNKIKSTPKTFPRKAGNVTKKPL 238
>gi|336064908|ref|YP_004559767.1| glucose inhibited division protein B [Streptococcus pasteurianus
ATCC 43144]
gi|334283108|dbj|BAK30681.1| glucose inhibited division protein B [Streptococcus pasteurianus
ATCC 43144]
Length = 244
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 131/235 (55%), Gaps = 13/235 (5%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE +T Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 22 FELTDT-QKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT--- 75
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
N + L+D+G GAG P + + I CPD VT+++S+NKR FL L V
Sbjct: 76 ----NQAICLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLADELGLEGVHF 131
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE GKD FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +
Sbjct: 132 YHGRAEDFGKDKHFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELAD 191
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++ + L+ + + P G + L K + TP KYPR G P K PL
Sbjct: 192 AKNAMTILFSKLID--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|29377741|ref|NP_816895.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis V583]
gi|255971517|ref|ZP_05422103.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255974467|ref|ZP_05425053.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256761822|ref|ZP_05502402.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256957048|ref|ZP_05561219.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256960912|ref|ZP_05565083.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256963950|ref|ZP_05568121.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|257078725|ref|ZP_05573086.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|257083973|ref|ZP_05578334.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257417390|ref|ZP_05594384.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257418873|ref|ZP_05595867.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257421312|ref|ZP_05598302.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|384517074|ref|YP_005704379.1| methyltransferase GidB [Enterococcus faecalis 62]
gi|38257437|sp|Q82YY1.1|RSMG_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29345209|gb|AAO82965.1| glucose-inhibited division protein B [Enterococcus faecalis V583]
gi|255962535|gb|EET95011.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255967339|gb|EET97961.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256683073|gb|EEU22768.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256947544|gb|EEU64176.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256951408|gb|EEU68040.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256954446|gb|EEU71078.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|256986755|gb|EEU74057.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|256992003|gb|EEU79305.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257159218|gb|EEU89178.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257160701|gb|EEU90661.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257163136|gb|EEU93096.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|323479207|gb|ADX78646.1| methyltransferase GidB [Enterococcus faecalis 62]
Length = 238
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 67 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 127 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 187 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|422860694|ref|ZP_16907338.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
gi|327469077|gb|EGF14549.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
Length = 237
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+ + D
Sbjct: 17 LNDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIDNQDR- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
KL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 73 -----KLLDIGAGAGFPSLPMKIICPQMDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|385838442|ref|YP_005876072.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Lactococcus lactis subsp. cremoris A76]
gi|414074476|ref|YP_006999693.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
UC509.9]
gi|358749670|gb|AEU40649.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Lactococcus lactis subsp. cremoris A76]
gi|413974396|gb|AFW91860.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 238
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 136/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y + L++WN K+NLTA+ + NEV +H DS+A PI Y D
Sbjct: 17 LSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVA---PI--LYGLITDQP 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++D+G GAG P L + I P+ +VT+++S+NKR FL L NV ++ G
Sbjct: 72 VS----ILDIGAGAGFPSLPMKIIFPELEVTIIDSLNKRINFLSLLTEELGLENVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D ++R +D ARAVA + +L+E+ +P ++ G ++ K +EE+ ++++
Sbjct: 128 RAEDFGQDSNYRATFDFVTARAVARLSVLSEFTIPFLKKNGNLLSLKAAQFEEELTDAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E P G +R V K + TPKKYPR GTPAK P+
Sbjct: 188 AIAILGGKFIKEIAYE--LPNGDERHIAVIEKKKETPKKYPRKAGTPAKSPI 237
>gi|420144861|ref|ZP_14652341.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403553|gb|EJN56790.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 244
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 124/235 (52%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHC 115
L+++Q Q H Y + L+ N++MNLT + EV +H DSL +P ++ + C
Sbjct: 17 LSSQQMAQFHRYFEVLVTVNQQMNLTNITAEPEVYLKHFYDSLTPSFYLPELRTEALTIC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D +G GAG P + L IA P +VT+++S+NKR FL L NV
Sbjct: 77 D-----------IGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNQLAGELDLDNVAF 125
Query: 176 VRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAET G K REQYD+ ARAVA + +L+E CLPLV+ GG FVA KG P E+
Sbjct: 126 YHDRAETFGSKRSEHREQYDLVTARAVARLNVLSELCLPLVKKGGQFVALKGQLPDGELD 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E A+ +G L + E R +V K R+TPK YPR G P K PL
Sbjct: 186 EAEYAISKLGGQLNTTAAFELPETGDSRHIIVVDKKRQTPKSYPRRAGVPNKEPL 240
>gi|422723360|ref|ZP_16779898.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
gi|315026604|gb|EFT38536.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
Length = 291
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|163847861|ref|YP_001635905.1| 16S rRNA methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
gi|189039492|sp|A9WGI4.1|RSMG_CHLAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163669150|gb|ABY35516.1| methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
Length = 238
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 136/234 (58%), Gaps = 16/234 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+LN Q Q Y+D L+ WN + NLTAV+D ++ RH+ DSL + + + DS
Sbjct: 19 SLNDHQLAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWL----ARVWETPPDS 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L+D+G+GAG P L L I P VTL+E+ K+ FL H + QL N++++
Sbjct: 75 -------LIDIGSGAGFPALPLKILYPALPVTLVEATGKKATFLRHVIDCLQLHNIRVLN 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
R ET+G++ + RE Y V ARAVAE+R+L EY LPL+R+GG +A KG P+ E+ ++
Sbjct: 128 ERIETVGQNPTEREHYQVVTARAVAELRVLLEYALPLLRLGGHLLAPKGRHPEVEIAAAQ 187
Query: 238 RAVQLMGASLLQLCSVE--SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G + VE + P R+ V+ K+ TP ++PR G PA+ PL
Sbjct: 188 NALALLGGEVSACLPVEIPDEEP---RSLVIVTKTAPTPNRFPRAVGIPARRPL 238
>gi|428768382|ref|YP_007154493.1| 16S rRNA methyltransferase, GidB family [Enterococcus faecalis str.
Symbioflor 1]
gi|427186555|emb|CCO73779.1| 16S rRNA methyltransferase, GidB family [Enterococcus faecalis str.
Symbioflor 1]
Length = 291
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|387880107|ref|YP_006310410.1| glucose-inhibited division protein B [Streptococcus parasanguinis
FW213]
gi|386793557|gb|AFJ26592.1| glucose-inhibited division protein B [Streptococcus parasanguinis
FW213]
Length = 237
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN K+NLTA+ + +EV +H DS+A PI S
Sbjct: 17 LTDRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIA---PILQSLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + L+D+G GAG P L + I PD VT+++S+NKR FL L V G
Sbjct: 69 -NQPIHLLDIGAGAGFPSLPMKILFPDLDVTIIDSLNKRINFLHLLAEELGLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + +++ + P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVED--NLQYELPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422697341|ref|ZP_16755286.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
gi|315174217|gb|EFU18234.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
Length = 300
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 79 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 128
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 129 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 188
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 189 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 248
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 249 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 299
>gi|312868207|ref|ZP_07728407.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
gi|311095952|gb|EFQ54196.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
Length = 237
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN K+NLTA+ D +EV +H DS+A PI
Sbjct: 17 LTDRQKEQYERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIA---PILQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ VT+++S+NKR FL L V G
Sbjct: 69 -NQPIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELGLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLKVGGQLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + +++ + P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVED--NLQYELPNGDPRYITVVEKKKETPNKYPRKAGLPNKRPL 237
>gi|293384807|ref|ZP_06630652.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|293388229|ref|ZP_06632748.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|312908849|ref|ZP_07767788.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|312979508|ref|ZP_07791190.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
gi|291077889|gb|EFE15253.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|291082376|gb|EFE19339.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|310625287|gb|EFQ08570.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|311287690|gb|EFQ66246.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
Length = 291
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|227518144|ref|ZP_03948193.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227555650|ref|ZP_03985697.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229547164|ref|ZP_04435889.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294781216|ref|ZP_06746563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|307268879|ref|ZP_07550244.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|307273954|ref|ZP_07555164.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|307277345|ref|ZP_07558443.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|307289974|ref|ZP_07569900.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|312901334|ref|ZP_07760615.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|312952967|ref|ZP_07771823.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|384514509|ref|YP_005709602.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
gi|421513541|ref|ZP_15960307.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Enterococcus faecalis ATCC 29212]
gi|422685184|ref|ZP_16743408.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|422691528|ref|ZP_16749563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|422694276|ref|ZP_16752269.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|422699433|ref|ZP_16757298.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|422707554|ref|ZP_16765247.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|422709176|ref|ZP_16766688.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|422712073|ref|ZP_16768851.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|422715532|ref|ZP_16772250.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|422719232|ref|ZP_16775880.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|422726320|ref|ZP_16782768.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|422728149|ref|ZP_16784567.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|424678194|ref|ZP_18115036.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV103]
gi|424680497|ref|ZP_18117303.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV116]
gi|424682376|ref|ZP_18119148.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV129]
gi|424685978|ref|ZP_18122653.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV25]
gi|424689081|ref|ZP_18125674.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV31]
gi|424693588|ref|ZP_18130017.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV37]
gi|424697994|ref|ZP_18134303.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV41]
gi|424699957|ref|ZP_18136165.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV62]
gi|424702880|ref|ZP_18139021.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV63]
gi|424707466|ref|ZP_18143449.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV65]
gi|424716006|ref|ZP_18145325.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV68]
gi|424720214|ref|ZP_18149324.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV72]
gi|424723343|ref|ZP_18152333.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV73]
gi|424727233|ref|ZP_18155867.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV81]
gi|424741536|ref|ZP_18169883.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV85]
gi|424749381|ref|ZP_18177487.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV93]
gi|430362709|ref|ZP_19427186.1| glucose-inhibited division protein B [Enterococcus faecalis OG1X]
gi|430372469|ref|ZP_19429813.1| hypothetical protein EFM7_2600 [Enterococcus faecalis M7]
gi|227074412|gb|EEI12375.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227175227|gb|EEI56199.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229307746|gb|EEN73733.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294451679|gb|EFG20134.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|306498968|gb|EFM68460.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|306505979|gb|EFM75151.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|306509262|gb|EFM78322.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|306514795|gb|EFM83345.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|310629108|gb|EFQ12391.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|311291567|gb|EFQ70123.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|315030098|gb|EFT42030.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|315033591|gb|EFT45523.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|315036256|gb|EFT48188.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|315148291|gb|EFT92307.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|315151256|gb|EFT95272.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|315153741|gb|EFT97757.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|315155033|gb|EFT99049.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|315158678|gb|EFU02695.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|315172084|gb|EFU16101.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|315576179|gb|EFU88370.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|315582990|gb|EFU95181.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|327536398|gb|AEA95232.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
gi|401673362|gb|EJS79754.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Enterococcus faecalis ATCC 29212]
gi|402351963|gb|EJU86830.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV103]
gi|402354279|gb|EJU89091.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV116]
gi|402367896|gb|EJV02231.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV129]
gi|402368156|gb|EJV02478.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV25]
gi|402369387|gb|EJV03668.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV31]
gi|402373770|gb|EJV07828.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV37]
gi|402374089|gb|EJV08133.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV41]
gi|402375130|gb|EJV09126.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV62]
gi|402384652|gb|EJV18196.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV65]
gi|402386006|gb|EJV19521.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV63]
gi|402389017|gb|EJV22433.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV68]
gi|402393966|gb|EJV27169.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV72]
gi|402397291|gb|EJV30318.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV81]
gi|402398750|gb|EJV31673.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV73]
gi|402401336|gb|EJV34114.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV85]
gi|402407880|gb|EJV40379.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis ERV93]
gi|429511980|gb|ELA01600.1| glucose-inhibited division protein B [Enterococcus faecalis OG1X]
gi|429514646|gb|ELA04184.1| hypothetical protein EFM7_2600 [Enterococcus faecalis M7]
Length = 291
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|424756247|ref|ZP_18184077.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R508]
gi|402408537|gb|EJV40998.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R508]
Length = 291
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVDFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|312902981|ref|ZP_07762170.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|422730508|ref|ZP_16786897.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
gi|310633649|gb|EFQ16932.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|315163401|gb|EFU07418.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
Length = 300
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 79 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 128
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 129 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 188
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 189 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 248
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 249 AIATLGGKFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 299
>gi|347521941|ref|YP_004779512.1| glucose inhibited division protein B [Lactococcus garvieae ATCC
49156]
gi|385833325|ref|YP_005871100.1| glucose inhibited division protein B [Lactococcus garvieae Lg2]
gi|343180509|dbj|BAK58848.1| glucose inhibited division protein B [Lactococcus garvieae ATCC
49156]
gi|343182478|dbj|BAK60816.1| glucose inhibited division protein B [Lactococcus garvieae Lg2]
Length = 237
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 134/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LSEQQKEQFERYFELLVEWNEKINLTAITEKKEVFLKHFYDSIA---PILYKLIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LK++D+G GAG P L + I P+ +VT+++S+NKR FL L V ++ G
Sbjct: 69 -NEPLKILDIGAGAGFPSLPMKIISPELQVTIIDSLNKRINFLSLLSKELHLEQVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +R Q+D+ ARAVA + +L+E +P ++ G ++ K EE+ +++
Sbjct: 128 RAEDFGQNPLYRAQFDIVTARAVARLSVLSELTIPFLKKNGRLLSLKAAKFDEELSDAKH 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G+ ++ ++ Q P G +R + K + TPKKYPR GTP K PL
Sbjct: 188 AIAVLGSKFIE--QIDYQLPNGDERHIALIEKKKETPKKYPRKAGTPNKKPL 237
>gi|307284003|ref|ZP_07564173.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
gi|306503374|gb|EFM72623.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
Length = 291
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|256851845|ref|ZP_05557233.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260661894|ref|ZP_05862804.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|297205469|ref|ZP_06922865.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
gi|256615803|gb|EEU20992.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260547363|gb|EEX23343.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|297150047|gb|EFH30344.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
Length = 239
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L+ +Q +Q Y L++ N +NLT + D+ EV +H DSL + + +
Sbjct: 16 ALSQKQIDQFSKYYQKLIEVNEYVNLTRITDLEEVYLKHFYDSL-------TPFLEYPE- 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++ DVG GAG P + + I P+ ++ +++S+NKR FL + L V++V
Sbjct: 68 -LFKKARICDVGAGAGFPSIPIKILVPEMQLAIVDSLNKRLKFLADLTADLDLGQVELVH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++V +RE++D+ ARAVA M L+EYCLPLV+ GG F+A KG + E+ +++
Sbjct: 127 GRAEDIGQNVKYREKFDLVTARAVANMATLSEYCLPLVKEGGKFLALKGPKAESELADAQ 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G + ++ +RT ++ K ++TPKKYPR GTP++ PL
Sbjct: 187 KAITVLGGQVAATKNLRLPESDEERTLILLNKVKQTPKKYPRQAGTPSRKPL 238
>gi|424672359|ref|ZP_18109326.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis 599]
gi|402356013|gb|EJU90758.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis 599]
Length = 291
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|322386902|ref|ZP_08060526.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|417922060|ref|ZP_12565549.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
cristatus ATCC 51100]
gi|321269184|gb|EFX52120.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|342832948|gb|EGU67236.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
cristatus ATCC 51100]
Length = 246
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 26 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 77
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 78 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 136
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 137 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 196
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 197 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 246
>gi|422883468|ref|ZP_16929917.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
gi|332363406|gb|EGJ41191.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
Length = 237
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLI------ 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 68 VNQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|320547408|ref|ZP_08041696.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
gi|320447953|gb|EFW88708.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
Length = 237
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 17 LSDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIA--PVLQGKIT------ 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P + + I CPD VT+++S+NKR FL L V G
Sbjct: 69 -NQEIRLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLAEELGLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +++
Sbjct: 128 RAEDYGQDKVFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
A+ ++ + L++ + + P G + L K + TP KYPR G P K PL
Sbjct: 188 AMSVLFSKLVE--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 237
>gi|422734777|ref|ZP_16791060.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
gi|315168466|gb|EFU12483.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
Length = 291
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|407980727|ref|ZP_11161503.1| 16S rRNA methyltransferase GidB [Bacillus sp. HYC-10]
gi|407412493|gb|EKF34288.1| 16S rRNA methyltransferase GidB [Bacillus sp. HYC-10]
Length = 239
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 127/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCD 116
TL+ Q EQ Y L++WN KMNLT++ + EV +H DS++ I ++ T+ CD
Sbjct: 16 TLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISAAFFIDFHNVTTICD 75
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+G GAG P + L I P VT+++S+ KR FL L +
Sbjct: 76 -----------IGAGAGFPSIPLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFY 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K EE++
Sbjct: 125 HDRAETFGQRKDQRESYDLVTARAVARLSVLSELCLPLVKKDGLFVALKASAADEEMQAG 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++AV ++G +++ S +R +V K ++TPKKYPR PGTP K P+
Sbjct: 185 KKAVTVLGGEVVEKHSFVLPLEESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|389574640|ref|ZP_10164700.1| 16S rRNA methyltransferase GidB [Bacillus sp. M 2-6]
gi|388425762|gb|EIL83587.1| 16S rRNA methyltransferase GidB [Bacillus sp. M 2-6]
Length = 239
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCD 116
TL+ Q EQ Y L++WN KMNLT++ + EV +H DS++ I + T+ CD
Sbjct: 16 TLSPVQLEQFETYFHMLVEWNEKMNLTSITEKEEVYLKHFYDSISAAFFINFHKVTTICD 75
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+G GAG P + L I P VT+++S+ KR FL L +
Sbjct: 76 -----------IGAGAGFPSIPLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFY 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K EE++
Sbjct: 125 HDRAETFGQRKDQRESYDLVTARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAG 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++AV ++G +++ S +R +V K ++TPKKYPR PGTP K P+
Sbjct: 185 KKAVTVLGGEVVEKHSFVLPLEESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|312866384|ref|ZP_07726602.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
gi|311098078|gb|EFQ56304.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
Length = 237
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 139/242 (57%), Gaps = 13/242 (5%)
Query: 49 RIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK 108
+++ FE L+ +Q++ Y L+ WN+K+NLTA+ D +EV +H DS+A P+
Sbjct: 8 QLLAQEGFE-LSDKQKQDFESYFRLLVDWNQKINLTAITDKDEVYLKHFYDSVA---PVL 63
Query: 109 NSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT 168
S N+ +KL+D+G GAG P L + I CP +VT+++S+ KR FLE
Sbjct: 64 QGLIS------NNTIKLLDIGAGAGFPSLPMKILCPQLEVTIIDSLKKRINFLEQVAKEL 117
Query: 169 QLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
+ V GRAE LG+D +FR YD+ ARAVA M++L+E +P ++VG +A K
Sbjct: 118 GMTGVHFYHGRAEDLGQDKAFRANYDLVTARAVARMQVLSELTIPFLKVGARLLALKAAA 177
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKV 287
+E+ ++ A++L+ A +++ S Q P G QR+ + K + TP KYPR G P K
Sbjct: 178 ADKELSQAQTALKLLFAKVIENRSY--QLPNGDQRSLTIVEKKKETPNKYPRRAGLPNKK 235
Query: 288 PL 289
PL
Sbjct: 236 PL 237
>gi|422881717|ref|ZP_16928173.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
gi|332363959|gb|EGJ41738.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
Length = 237
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L+ WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKEQFERYFELLVAWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|168207745|ref|ZP_02633750.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
gi|170660931|gb|EDT13614.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
Length = 239
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPP--IKNSYTSHCD 116
N + ++ LY D L +WN K+NLTA+ + E++++H D + K + T
Sbjct: 18 FNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKT---- 73
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++DVGTGAG PGL +AI D +VTLL+S+NKR FL V+ L NV+ +
Sbjct: 74 --------VIDVGTGAGFPGLPIAIMREDVEVTLLDSLNKRINFLNEVVNKLGLKNVETI 125
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE +D+A +RAVA M +L+E+C+P V+V G F+A KG + EE+ +S
Sbjct: 126 HSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVKVNGNFIALKGPNITEELNDS 185
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L + VE + V+ K + TPK +PR G K PL
Sbjct: 186 KNAIGTLGGKLKCITEVEIEGTDLNHNLVIVDKIKSTPKTFPRKAGNVTKKPL 238
>gi|379728114|ref|YP_005320299.1| rRNA small subunit methyltransferase [Melissococcus plutonius
DAT561]
gi|376319017|dbj|BAL62804.1| rRNA small subunit methyltransferase [Melissococcus plutonius
DAT561]
Length = 238
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 127/233 (54%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCD 116
L Q +Q Y L++WN+KMNLT + + V +H DS LA K ++
Sbjct: 17 LTDYQMKQFDSYYKLLIEWNQKMNLTTILNKEAVYLKHFYDSISLAFFANFKGGHS---- 72
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
L D+G GAG P + L I PD ++T+++S+NKR FL V+ ++ +V +
Sbjct: 73 --------LCDIGAGAGFPSIPLKILFPDLQITIIDSLNKRISFLTELVNQLEMDHVFLY 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE G+D +FR Q+D ARAVA + +L+E CLPLVR G F+A K +EE+ +
Sbjct: 125 HERAEVFGQDSTFRGQFDYVTARAVARLNVLSELCLPLVRKEGYFLAPKAARGEEEMLEA 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ ++G + + S E +R +V K + TPKKYPR G P K P+
Sbjct: 185 KNAIAVLGGKIQEEISFELPITQDERHIIVIQKKKETPKKYPRKSGLPNKQPI 237
>gi|320527144|ref|ZP_08028331.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
gi|320132472|gb|EFW25015.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
Length = 232
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 15/232 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q +Q+ Y L++WN KMNLTA+ + E++E+H DS I+P K
Sbjct: 16 SLSETQVKQLEQYAQLLVEWNEKMNLTAITEHGEILEKHFYDS--ILPLGKGKIFG---- 69
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
K+ DVGTGAG PGLV I P+ V+L+E KRC FL+ ++ L N+ +
Sbjct: 70 ------KIADVGTGAGFPGLVWKIVKPELDVSLIEPTGKRCTFLQEVMNQLHLENIHVYN 123
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE K + REQYDV ARAVA +R+L+E C+PLV+V GLF+A KG E K +
Sbjct: 124 TRAEEQVK--TDREQYDVVTARAVANLRVLSELCIPLVKVNGLFLAMKGMQGNVEAKEAA 181
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A +++G L + + S R + K TP++YPR+ G K PL
Sbjct: 182 HATKMLGVELEETQDI-SLYTGDMRVNLYYRKVSHTPQQYPRNYGQIKKKPL 232
>gi|147679250|ref|YP_001213465.1| S-adenosylmethionine-dependent methyltransferase [Pelotomaculum
thermopropionicum SI]
gi|189039870|sp|A5CY44.1|RSMG_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146275347|dbj|BAF61096.1| predicted S-adenosylmethionine-dependent methyltransferase
[Pelotomaculum thermopropionicum SI]
Length = 239
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+ +Q Q Y +++ N+ +NLTA+ EV +H DSL + +
Sbjct: 18 VITEKQVRQFEEYYSLIIERNKSLNLTAITGEREVAVKHFLDSLTCLKAV---------- 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L+DVGTGAG PG+ L I P +V L+ES K+ VFL A+ L + +
Sbjct: 68 PLEDGTSLMDVGTGAGFPGIPLKICRPSVRVKLVESAEKKAVFLREAIGRLGLEMAEAIW 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE +GKD RE+Y VARAVAE+ +LAEYCLP VGG F+A KG +EE ++
Sbjct: 128 ARAEDVGKDPDHREKYGCVVARAVAELAVLAEYCLPAAGVGGCFLAMKGPKAEEEAVRAK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L ++ +++ +R+ VV K TP+KYPR PG P K PL
Sbjct: 188 DAIKILGGRLEEIINLKLPFTGDRRSLVVIRKIGETPEKYPRRPGVPQKRPL 239
>gi|405760754|ref|YP_006701350.1| methyltransferase GidB [Streptococcus pneumoniae SPNA45]
gi|404277643|emb|CCM08185.1| methyltransferase GidB [Streptococcus pneumoniae SPNA45]
Length = 237
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D +EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|386727815|ref|YP_006194141.1| protein RsmG [Paenibacillus mucilaginosus K02]
gi|384094940|gb|AFH66376.1| RsmG [Paenibacillus mucilaginosus K02]
Length = 241
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 10/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H LN Q Q +Y L+ WN +MNLT + + ++V +H DSL++ +
Sbjct: 15 HGIALNEHQLSQFEIYYKELVDWNERMNLTGITERDQVYLKHFFDSLSLAFYV------- 67
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
+ + L D+G+GAG P + L IA P +VT+++S+NKR FL H L NV
Sbjct: 68 ---PVDDHAALADIGSGAGFPSIPLKIAFPHLQVTIVDSLNKRIQFLNHLTMALGLSNVT 124
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V GRAE + + + R++YD+ ARAVA + +L E+CLP V GLFVA KG D +E+K
Sbjct: 125 CVHGRAEDVARGAAHRDRYDLVTARAVARLAVLNEFCLPFTSVDGLFVAMKGQDIGDELK 184
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ R++Q + A +++ R V+ K TP K+PR G P K PL
Sbjct: 185 EAGRSLQELHAKVVETHRFILPIEESVRHLVITKKIDSTPAKFPRKAGLPMKEPL 239
>gi|241895296|ref|ZP_04782592.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
gi|241871602|gb|EER75353.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
Length = 239
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 12/233 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q Y D L+ N MNLTA+ D ++V +H DSL + T
Sbjct: 17 LDDKQLAQYQTYYDRLVSVNEHMNLTAITDRDDVYLKHFYDSLTLAWAYPKLQTDQ---- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+++DVG GAG P L L IA P K+T+++++NKR FL+ V+ L +V +V
Sbjct: 73 ----LRMIDVGAGAGFPSLPLKIAFPQLKITIIDALNKRIKFLQELVTELGLEDVTVVHA 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G K REQ+DVA ARA+A + +L E LPLV+VGG +A KG EE+ ++
Sbjct: 129 RAEEFGHKKAPNREQFDVATARALARLNVLGELTLPLVKVGGALLAMKGSAASEELHEAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + Q V P G RT ++ K TP +YPR PG PA+ PL
Sbjct: 189 GAITKLGGKIGQEVPV--NLPNGDPRTIIIIDKVSATPNRYPRKPGDPARKPL 239
>gi|253581095|ref|ZP_04858355.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847631|gb|EES75601.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 236
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q + + L++ N+ MNLT + + EV+ +H DSLA + I +
Sbjct: 15 LSQKQKNQFIQFYEFLVEKNKVMNLTGITEFEEVLTKHFLDSLACVKAIDMTKVK----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++D+GTGAG PG+ L IA P + LL+S+ KR FLE + L L ++ + G
Sbjct: 70 -----TIMDIGTGAGFPGVPLKIAFPHLEACLLDSLKKRVNFLEESFELLGLEGIKAIHG 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K+ +RE+YD+ V+RAV+ + L+EYCLP V+ GG F++ K QEE + +E+
Sbjct: 125 RAEEYAKNKEYREKYDLCVSRAVSNLATLSEYCLPYVKTGGTFISYKSGTVQEEAEEAEK 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G + + + R+ V+ K + TP KYPR GTP K PL
Sbjct: 185 AINILGGQVKDITYFKLPDSEIDRSLVIINKKKSTPGKYPRKAGTPLKEPL 235
>gi|347534083|ref|YP_004840753.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504139|gb|AEN98821.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 240
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 137/235 (58%), Gaps = 16/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y + L+++N+ +NLT + + N+V +H DS++ P Y S +
Sbjct: 17 LSDQQMQQFKDYFELLVEYNQNVNLTNITERNDVYLKHFYDSIS--PAF---YVSELKEA 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ LVDVG GAG P + L I PD +VT+++S+NKR +FL+ VS L V +V
Sbjct: 72 KS----LVDVGAGAGFPSIPLKIVNPDLQVTIVDSLNKRIIFLQKLVSQLGLTGVNLVHA 127
Query: 179 RAETLG----KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G KD RE +D+A ARA+A + +++E CLPLV++GG +A K EE+
Sbjct: 128 RAEEFGGRRSKD---RESFDLATARALARLSVMSELCLPLVKIGGKLIAMKAAKAPEELT 184
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +A+ ++G + + S + +R +V K R+TP KYPR GTP K P+
Sbjct: 185 DATKAIHVLGGKVTEDFSFKLPENDEERHIIVIEKERKTPIKYPRKAGTPNKEPI 239
>gi|293399789|ref|ZP_06643935.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306189|gb|EFE47432.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 236
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 134/239 (56%), Gaps = 29/239 (12%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q +Q +Y LL+WN+KMNLTA+ D++E+ E+H DS I+P
Sbjct: 20 TLQDTQLQQFAMYAAMLLEWNQKMNLTAITDMDEIYEKHFLDS--ILP------------ 65
Query: 118 SCNSNLK--LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
S + LK DVG GAG P + L I PD ++T++E++ KR FLE +L NV
Sbjct: 66 SFDVKLKGTFCDVGAGAGFPSIPLKIVYPDLEITIVETLGKRITFLEALCHQLKLNNVHC 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V RAE K+ RE +D+ ARAVA + +L+E C+PLV+VGG+F+A KG + QEE
Sbjct: 126 VHARAEDYAKE--HRESFDIVSARAVANLTMLSELCIPLVKVGGMFLALKGANAQEEYAL 183
Query: 236 SERAVQLMGASLLQLCSVESQ-----SPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E+A++L+G C + + S +R V K ++TP KYPR K PL
Sbjct: 184 AEKAIRLLG------CEEKRRDEKVLSDGSKRVNFVFEKVKKTPLKYPRAFAQIKKNPL 236
>gi|332687257|ref|YP_004457031.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
gi|332371266|dbj|BAK22222.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
Length = 238
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 127/233 (54%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS--LAIIPPIKNSYTSHCD 116
L Q +Q Y L++WN+KMNLT + + V +H DS LA K ++
Sbjct: 17 LTDYQMKQFDSYYKLLIEWNQKMNLTTILNKEAVYLKHFYDSISLAFFANFKGRHS---- 72
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
L D+G GAG P + L I PD ++T+++S+NKR FL V+ ++ +V +
Sbjct: 73 --------LCDIGAGAGFPSIPLKILFPDLQITIIDSLNKRISFLTELVNQLEMDHVFLY 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE G+D +FR Q+D ARAVA + +L+E CLPLVR G F+A K +EE+ +
Sbjct: 125 HERAEVFGQDSTFRGQFDYVTARAVARLNVLSELCLPLVRKEGYFLAPKAARGEEEMLEA 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ ++G + + S E +R +V K + TPKKYPR G P K P+
Sbjct: 185 KNAIAVLGGKIQEEISFELPITQDERHIIVIQKKKETPKKYPRKSGLPNKQPI 237
>gi|229550734|ref|ZP_04439459.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|307286501|ref|ZP_07566600.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|422702859|ref|ZP_16760688.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
gi|229304167|gb|EEN70163.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|306502374|gb|EFM71651.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|315165660|gb|EFU09677.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
Length = 291
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 70 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 119
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 120 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 179
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPLV+ G F+A K +EE+ ++
Sbjct: 180 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKREGYFLALKASKSEEEINEAKP 239
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 240 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 290
>gi|227873160|ref|ZP_03991451.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
gi|227840991|gb|EEJ51330.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
Length = 248
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 132/232 (56%), Gaps = 3/232 (1%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L +Q Q + Y L++ N+ MNLTA+ + +V+ +H D LAI + + + S
Sbjct: 19 SLTEQQLLQFYQYYQILVEKNKVMNLTAITEEEDVIVKHFVDCLAIC---QMNVSRETFS 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++DVGTGAG PGLVL IA P +++L +S+ KR FLE V L V+
Sbjct: 76 EWIEGKSVMDVGTGAGFPGLVLKIAFPSIQLSLSDSLQKRIRFLEELVESLGLEGVKFYH 135
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE LG D + REQYD+ V+RAVA + L+EY LP V+ GG F+A KG + +EE++ +
Sbjct: 136 GRAEDLGHDKNLREQYDLVVSRAVANLATLSEYDLPFVKPGGYFLALKGREVEEELEQGK 195
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ L+G ++ R ++ K KKYPR GTPAK PL
Sbjct: 196 KAIFLLGGKCVEKKIYTLPETDMGRAMLLIQKIEPCGKKYPRKAGTPAKSPL 247
>gi|417848454|ref|ZP_12494399.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1073]
gi|339452668|gb|EGP65291.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1073]
Length = 237
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ +Q++Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 16 SLSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L +V
Sbjct: 69 --NETIKLLDIGAGAGFPSLPMKILYPQLNVTIIDSLNKRINFLKLLAQELDLDDVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 127 GRAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 187 NALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|15903207|ref|NP_358757.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae R6]
gi|182684218|ref|YP_001835965.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae CGSP14]
gi|410476690|ref|YP_006743449.1| glucose-inhibited division protein B [Streptococcus pneumoniae
gamPNI0373]
gi|444388159|ref|ZP_21186149.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
PCS125219]
gi|444389601|ref|ZP_21187516.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS70012]
gi|444391433|ref|ZP_21189264.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS81218]
gi|444395138|ref|ZP_21192684.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0002]
gi|444397739|ref|ZP_21195222.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0006]
gi|444400270|ref|ZP_21197681.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0007]
gi|444402807|ref|ZP_21199958.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0008]
gi|444405744|ref|ZP_21202599.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0009]
gi|444407357|ref|ZP_21204024.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0010]
gi|444410668|ref|ZP_21207192.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0076]
gi|444413069|ref|ZP_21209385.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0153]
gi|444414315|ref|ZP_21210597.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0199]
gi|444416887|ref|ZP_21212958.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0360]
gi|444419249|ref|ZP_21215127.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0427]
gi|444422411|ref|ZP_21218067.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0446]
gi|15458795|gb|AAK99967.1| Glucose inhibited division protein B [Streptococcus pneumoniae R6]
gi|182629552|gb|ACB90500.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
gi|406369635|gb|AFS43325.1| glucose-inhibited division protein B [Streptococcus pneumoniae
gamPNI0373]
gi|444250309|gb|ELU56790.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
PCS125219]
gi|444256064|gb|ELU62402.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS70012]
gi|444258457|gb|ELU64779.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0002]
gi|444260396|gb|ELU66704.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0006]
gi|444265802|gb|ELU71791.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS81218]
gi|444265856|gb|ELU71842.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0008]
gi|444266819|gb|ELU72751.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0007]
gi|444270953|gb|ELU76704.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0010]
gi|444272371|gb|ELU78088.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0009]
gi|444273228|gb|ELU78901.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0153]
gi|444276887|gb|ELU82419.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0076]
gi|444282614|gb|ELU87867.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0199]
gi|444284925|gb|ELU90026.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0360]
gi|444287296|gb|ELU92229.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0427]
gi|444288240|gb|ELU93138.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PNI0446]
Length = 245
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 25 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 77 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 136 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 195
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 196 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|417918250|ref|ZP_12561802.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis SK236]
gi|342828705|gb|EGU63071.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis SK236]
Length = 237
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L RQ+EQ Y + L++WN K+NLTA+ + +EV +H DS+A PI
Sbjct: 11 ADHGFPLTDRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIA---PILQGLI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
N ++L+D+G GAG P L + I P+ VT+++S+NKR FL L
Sbjct: 68 E------NQPIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELGLSR 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE +D +FR Q+D+ ARAVA M++LAE +P ++VGG +A K + EE
Sbjct: 122 VHFYHGRAEDFAQDKAFRAQFDIVTARAVARMQVLAELTIPYLKVGGRLLALKASNAPEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ ++ A+ L+ + + +++ + P G R + K + TP KYPR G P K PL
Sbjct: 182 LEEAKNALNLLFSKVED--NLQYELPNGDPRYITLVEKKKETPNKYPRKAGMPNKRPL 237
>gi|373107156|ref|ZP_09521456.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Stomatobaculum
longum]
gi|371652095|gb|EHO17521.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Stomatobaculum
longum]
Length = 258
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 13/230 (5%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q EQ ++ + +L+ N+ MNLT + + EV+ +H DSLA + + H
Sbjct: 32 QMEQFAIFYEDMLEKNKVMNLTGITEPREVIVKHYLDSLAPAGLLADFPAEHA------- 84
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAV---SLTQLLNVQIVRGR 179
KL+D+G+GAG PG+ LAIA P ++TL++S+NKR V+L + L+Q + + R
Sbjct: 85 -KLLDLGSGAGFPGIPLAIAFPALQLTLMDSLNKRVVYLTDEIKKLGLSQ--HTAAIHAR 141
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE L + RE Y+ +RAVA + +L+E+CLP V+VGG +A K D EE+ +++ A
Sbjct: 142 AEDLARQAEQRETYEYCTSRAVARLSVLSEFCLPFVKVGGQMIAYKAGDIAEELSDAKYA 201
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +G Q+ S G+R+ VV K R TP YPR G PAK PL
Sbjct: 202 IRKLGGEPEQVISFSLPEDAGERSLVVIRKYRETPAVYPRKAGMPAKEPL 251
>gi|171780281|ref|ZP_02921185.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705878|ref|YP_005204337.1| Methyl transferase gidB (Glucose-inhibited division protein B)
[Streptococcus infantarius subsp. infantarius CJ18]
gi|171281629|gb|EDT47064.1| 16S rRNA methyltransferase GidB [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682577|gb|AEZ62866.1| Methyl transferase gidB (Glucose-inhibited division protein B)
[Streptococcus infantarius subsp. infantarius CJ18]
Length = 237
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 131/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 17 LTDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIA--PVLQGKIT------ 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++L+D+G GAG P + + I CP VT+++S+NKR FL L V G
Sbjct: 69 -NQDVRLLDIGAGAGFPSIPIKILCPAIDVTIIDSLNKRINFLNRLADELGLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +++
Sbjct: 128 RAEDYGQDKAFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
A+ ++ + L++ + + P G + L K + TP KYPR G P K PL
Sbjct: 188 AMSVLFSKLIE--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 237
>gi|350565176|ref|ZP_08933964.1| glucose inhibited division protein B [Peptoniphilus indolicus ATCC
29427]
gi|348664041|gb|EGY80566.1| glucose inhibited division protein B [Peptoniphilus indolicus ATCC
29427]
Length = 229
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 129/231 (55%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+T + EQ+ Y + LL+ N+ MNLTA+ D +EV +H DSL+I K Y
Sbjct: 11 LDTSKVEQLEKYKEMLLEKNKVMNLTAITDSDEVDVKHFLDSLSIA---KTEY------- 60
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L+DVGTGAG PGL L I P+ +VTLL+S+NKR VFL + L ++ + G
Sbjct: 61 LKAGKTLLDVGTGAGFPGLPLKIYNPEIEVTLLDSLNKRIVFLREVIGELGLEGIEAIHG 120
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + RE +D+ +RAVA MR L EY LP V+VGG + KG + +EE+K S+
Sbjct: 121 RAEEAARG-EMRESFDIVTSRAVANMRTLLEYDLPFVKVGGHLICMKGPEHKEELKESKN 179
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L ++ V+ VV K T KYPR G P PL
Sbjct: 180 ALSILGGKLKEIIEVKLPKDI-THYLVVIEKVNSTKDKYPRAGGKPKSQPL 229
>gi|229550864|ref|ZP_04439589.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
gi|229315689|gb|EEN81662.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
Length = 256
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 134/258 (51%), Gaps = 16/258 (6%)
Query: 37 PHRTRAKTLTTTRI-VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMER 95
P +T A T + + H LN QQ+Q Y L+ N KMNLT + +V +
Sbjct: 7 PKKTEADMDPTAFVHALADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLK 66
Query: 96 HIDDSLA---IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLE 152
H DSL ++P +++ S CD VG GAG P + L IA P K+T+++
Sbjct: 67 HFYDSLTLGLVVPKLQSQPLSLCD-----------VGAGAGFPSIPLKIAFPQLKITIVD 115
Query: 153 SMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYC 211
S+ KR FLE + +L +VQ+ RAET G K R QYD+ ARAVA + +LAE C
Sbjct: 116 SLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKSPHRGQYDLVTARAVAALNVLAELC 175
Query: 212 LPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSR 271
LPL + G FVA K EE+ ++ A+ L+G L+Q ++ R +V K +
Sbjct: 176 LPLAKQHGQFVAMKAAATPEELIAAKPAINLLGGKLVQDAALTLPETGDTRHLLVIEKVK 235
Query: 272 RTPKKYPRDPGTPAKVPL 289
TP KYPR PG P K PL
Sbjct: 236 PTPNKYPRKPGMPNKQPL 253
>gi|335030015|ref|ZP_08523514.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis SK1076]
gi|334267477|gb|EGL85937.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis SK1076]
Length = 237
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L +Q+ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 16 NLTDQQKAQFERYFELLIEWNQKINLTAITEKEEVYLKHFYDSIA---PILQGLIE---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P VT+++S+NKR FL L NV
Sbjct: 69 --NQEIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLNLLAQELDLENVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G+D +FR Q+D+ ARAVA +++L+E +P ++VGG +A K + EE+ ++
Sbjct: 127 GRAEDFGQDKNFRAQFDIVTARAVARLQVLSELTIPFLKVGGKLLALKASNAPEELTEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 187 NALNLLFSKVED--NISYTLPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|157694473|ref|YP_001488935.1| 16S rRNA methyltransferase GidB [Bacillus pumilus SAFR-032]
gi|166989743|sp|A8FJF8.1|RSMG_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157683231|gb|ABV64375.1| glucose-inhibited division protein B [Bacillus pumilus SAFR-032]
Length = 239
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCD 116
TL+ Q EQ Y L++WN KMNLT++ + EV +H DS++ I + T+ CD
Sbjct: 16 TLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTTICD 75
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+G GAG P + L I P VT+++S+ KR FL L +
Sbjct: 76 -----------IGAGAGFPSIPLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFY 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K EE++
Sbjct: 125 HDRAETFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAG 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++AV ++G +++ S +R +V K ++TPKKYPR PGTP K P+
Sbjct: 185 KKAVTVLGGEVVEKHSFVLPLEESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|335997102|ref|ZP_08563018.1| glucose-inhibited division protein B [Lactobacillus ruminis
SPM0211]
gi|335351370|gb|EGM52863.1| glucose-inhibited division protein B [Lactobacillus ruminis
SPM0211]
Length = 260
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y + L+ N +NLTA+ +EV +H DSL +K+ T
Sbjct: 32 LSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTK----- 86
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L + DVG GAG P + + IA P+ KVT+++S+NKR FL L V+ G
Sbjct: 87 ---ALTVCDVGAGAGFPSIPMKIAFPNLKVTIVDSLNKRIRFLNDLSERLGLEEVEFHHG 143
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK RE YDV ARAVA + +L+EYCLPL RVGG F+A K ++E++++E
Sbjct: 144 RAEEFAGKKSKHRESYDVVTARAVARLSVLSEYCLPLARVGGRFIALKAQKSEQELEDAE 203
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G L+ R + K +TPK+YPR GTPAK+PL
Sbjct: 204 YAIESLGGKLVDDAVFHLPETDDVRHIITIEKISQTPKRYPRKAGTPAKMPL 255
>gi|194016524|ref|ZP_03055138.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
gi|194011997|gb|EDW21565.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
Length = 239
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCD 116
TL+ Q EQ Y L++WN KMNLT++ + EV +H DS++ I + T+ CD
Sbjct: 16 TLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTTICD 75
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+G GAG P + L I P VT+++S+ KR FL L +
Sbjct: 76 -----------IGAGAGFPSIPLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFY 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G+ RE YD+ ARAVA + +L+E CLPLV+ GLFVA K EE++
Sbjct: 125 HDRAETFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKEGLFVALKASAADEEMQAG 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++AV ++G +++ S +R +V K ++TPKKYPR PGTP K P+
Sbjct: 185 KKAVTVLGGEVVEKHSFVLPLEESERNIIVIEKKKQTPKKYPRKPGTPNKSPI 237
>gi|269926956|ref|YP_003323579.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
gi|269790616|gb|ACZ42757.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
Length = 251
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 63 QQEQIHLYV---DALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
+++Q+ L++ D + +W+ K N+TA++ E++ +HI DSL++ + D
Sbjct: 28 EEDQLELFLALADLVNEWSYKYNITAIRSRREILTKHIIDSLSV----AIGHWQINDGKV 83
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+NL +DVG+GAG P L +AIA PD VT LE++ K+ F+ A S + LNV ++ R
Sbjct: 84 PANL--LDVGSGAGFPSLPIAIAFPDINVTALEAIRKKASFIA-AASESLGLNVTVLNQR 140
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE RE +++ VARAVA M L EYCLP VR+GG FVA K + EE+ +S +A
Sbjct: 141 AEVAAHLPDLREAFELVVARAVAYMPTLLEYCLPFVRLGGRFVAMKSENLDEELNDSSQA 200
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++++G Q G R+ VV K R TP++YPR PG PAK PL
Sbjct: 201 LEILGGEWGQTLHYRLPDVDGIRSLVVVNKVRSTPQRYPRRPGIPAKRPL 250
>gi|421451686|ref|ZP_15901047.1| Methyltransferase gidB [Streptococcus salivarius K12]
gi|400182117|gb|EJO16379.1| Methyltransferase gidB [Streptococcus salivarius K12]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 134/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++L+D+G GAG P L + I CP+ VT+++S+NKR FL +L V G
Sbjct: 69 -NQSIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ +++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--PILNENYRLPNGDGRNVTIVDKKKETPNKYPRRAGIPNKKPL 237
>gi|167044776|gb|ABZ09445.1| putative glucose inhibited division protein [uncultured marine
microorganism HF4000_APKG8C21]
Length = 304
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 122/231 (52%), Gaps = 8/231 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E+ Y + WN ++NLT+V +V H DSL + I +
Sbjct: 82 LSLAQIERFRAYYQEIANWNTRVNLTSVTRWEDVQTTHFVDSLTVSLAIPRAVLESG--- 138
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+VDVG+GAG PG+ L IA P +VTL+ES K+ FL H L +V + G
Sbjct: 139 -----WIVDVGSGAGFPGIPLKIAFPGARVTLIESTGKKTAFLSHLTHALGLEDVDVRTG 193
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L D RE +D V+RAVA M L E LP RVGG+ VA K D Q+E++ ++R
Sbjct: 194 RAEALAHDPELRESFDCVVSRAVAGMAALVELTLPFCRVGGIVVAQKKLDTQDELRRAQR 253
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ MG L ++ V + G R VV K TP +YPR G PAK PL
Sbjct: 254 AIETMGGGLKEVTEVSPEILGGARNLVVLEKLSPTPDRYPRRSGMPAKRPL 304
>gi|116516833|ref|YP_816609.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae D39]
gi|148985185|ref|ZP_01818424.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|148989310|ref|ZP_01820690.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|149002659|ref|ZP_01827591.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|149007047|ref|ZP_01830716.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|149012342|ref|ZP_01833411.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|169834139|ref|YP_001694710.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Hungary19A-6]
gi|225856947|ref|YP_002738458.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|237649984|ref|ZP_04524236.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974]
gi|237821110|ref|ZP_04596955.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974M2]
gi|303261605|ref|ZP_07347552.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|303267143|ref|ZP_07353011.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|303268436|ref|ZP_07354231.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|307127124|ref|YP_003879155.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|387757609|ref|YP_006064588.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|387759485|ref|YP_006066463.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|417686762|ref|ZP_12336038.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
gi|418076428|ref|ZP_12713664.1| methyltransferase GidB [Streptococcus pneumoniae GA47502]
gi|418132096|ref|ZP_12768971.1| methyltransferase GidB [Streptococcus pneumoniae GA11304]
gi|418144124|ref|ZP_12780924.1| methyltransferase GidB [Streptococcus pneumoniae GA13494]
gi|418155276|ref|ZP_12792005.1| methyltransferase GidB [Streptococcus pneumoniae GA16242]
gi|418166922|ref|ZP_12803578.1| methyltransferase GidB [Streptococcus pneumoniae GA17971]
gi|418180680|ref|ZP_12817250.1| methyltransferase GidB [Streptococcus pneumoniae GA41688]
gi|418200142|ref|ZP_12836587.1| methyltransferase GidB [Streptococcus pneumoniae GA47976]
gi|418225675|ref|ZP_12852303.1| methyltransferase GidB [Streptococcus pneumoniae NP112]
gi|418232319|ref|ZP_12858906.1| methyltransferase GidB [Streptococcus pneumoniae GA07228]
gi|418236779|ref|ZP_12863347.1| methyltransferase GidB [Streptococcus pneumoniae GA19690]
gi|419442688|ref|ZP_13982716.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13224]
gi|419457669|ref|ZP_13997613.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02254]
gi|419466684|ref|ZP_14006567.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05248]
gi|419480167|ref|ZP_14019973.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19101]
gi|419499863|ref|ZP_14039557.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47597]
gi|419512632|ref|ZP_14052266.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05578]
gi|419514850|ref|ZP_14054475.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae England14-9]
gi|419516907|ref|ZP_14056523.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02506]
gi|419521246|ref|ZP_14060841.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05245]
gi|421211350|ref|ZP_15668333.1| methyltransferase GidB [Streptococcus pneumoniae 2070035]
gi|421227492|ref|ZP_15684196.1| methyltransferase GidB [Streptococcus pneumoniae 2072047]
gi|421232025|ref|ZP_15688668.1| methyltransferase GidB [Streptococcus pneumoniae 2080076]
gi|421266302|ref|ZP_15717183.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR27]
gi|421268337|ref|ZP_15719207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR95]
gi|421283433|ref|ZP_15734220.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04216]
gi|421289882|ref|ZP_15740633.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA54354]
gi|421296165|ref|ZP_15746876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58581]
gi|421305202|ref|ZP_15755858.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62331]
gi|29336662|sp|Q8DPH3.2|RSMG_STRR6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122278505|sp|Q04K39.1|RSMG_STRP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766908|sp|C1CL20.1|RSMG_STRZP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116077409|gb|ABJ55129.1| methyltransferase GidB [Streptococcus pneumoniae D39]
gi|147759270|gb|EDK66263.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|147761351|gb|EDK68317.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|147763668|gb|EDK70603.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|147922630|gb|EDK73748.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|147925288|gb|EDK76367.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|168996641|gb|ACA37253.1| methyltransferase GidB [Streptococcus pneumoniae Hungary19A-6]
gi|225724396|gb|ACO20248.1| methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|301800198|emb|CBW32806.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|301802074|emb|CBW34807.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|302637185|gb|EFL67673.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|302642042|gb|EFL72394.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|302643304|gb|EFL73583.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|306484186|gb|ADM91055.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|332074898|gb|EGI85370.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
gi|353749129|gb|EHD29779.1| methyltransferase GidB [Streptococcus pneumoniae GA47502]
gi|353807762|gb|EHD88031.1| methyltransferase GidB [Streptococcus pneumoniae GA11304]
gi|353809865|gb|EHD90125.1| methyltransferase GidB [Streptococcus pneumoniae GA13494]
gi|353820654|gb|EHE00837.1| methyltransferase GidB [Streptococcus pneumoniae GA16242]
gi|353830518|gb|EHE10648.1| methyltransferase GidB [Streptococcus pneumoniae GA17971]
gi|353845382|gb|EHE25424.1| methyltransferase GidB [Streptococcus pneumoniae GA41688]
gi|353865189|gb|EHE45098.1| methyltransferase GidB [Streptococcus pneumoniae GA47976]
gi|353880872|gb|EHE60686.1| methyltransferase GidB [Streptococcus pneumoniae NP112]
gi|353887046|gb|EHE66826.1| methyltransferase GidB [Streptococcus pneumoniae GA07228]
gi|353893011|gb|EHE72759.1| methyltransferase GidB [Streptococcus pneumoniae GA19690]
gi|379531542|gb|EHY96776.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02254]
gi|379538546|gb|EHZ03726.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05245]
gi|379544807|gb|EHZ09951.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05248]
gi|379551989|gb|EHZ17080.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13224]
gi|379570738|gb|EHZ35699.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19101]
gi|379599171|gb|EHZ63954.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47597]
gi|379635399|gb|EHZ99957.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae England14-9]
gi|379637102|gb|EIA01660.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA05578]
gi|379638980|gb|EIA03524.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02506]
gi|395573308|gb|EJG33899.1| methyltransferase GidB [Streptococcus pneumoniae 2070035]
gi|395595194|gb|EJG55428.1| methyltransferase GidB [Streptococcus pneumoniae 2072047]
gi|395595654|gb|EJG55884.1| methyltransferase GidB [Streptococcus pneumoniae 2080076]
gi|395867518|gb|EJG78641.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR27]
gi|395869832|gb|EJG80946.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR95]
gi|395881396|gb|EJG92445.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04216]
gi|395889123|gb|EJH00134.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA54354]
gi|395896038|gb|EJH07006.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58581]
gi|395905864|gb|EJH16769.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62331]
gi|429316235|emb|CCP35907.1| methyltransferase GidB [Streptococcus pneumoniae SPN034156]
gi|429319577|emb|CCP32860.1| methyltransferase GidB [Streptococcus pneumoniae SPN034183]
gi|429321394|emb|CCP34834.1| methyltransferase GidB [Streptococcus pneumoniae SPN994039]
gi|429323214|emb|CCP30875.1| methyltransferase GidB [Streptococcus pneumoniae SPN994038]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|433449083|ref|ZP_20411948.1| 16S rRNA methyltransferase GidB [Weissella ceti NC36]
gi|429539472|gb|ELA07509.1| 16S rRNA methyltransferase GidB [Weissella ceti NC36]
Length = 239
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H L Q Q Y + L+ N MNLTA+ D ++V +H DSL +
Sbjct: 12 EHGVVLTDTQIMQYEKYYERLVAVNEHMNLTAITDRDDVYLKHFYDSLTL--------AF 63
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
+ LK+VDVG GAG P + L IA P+ +T+++++NKR FL V +L NV
Sbjct: 64 AYPALQTEPLKMVDVGAGAGFPSIPLKIAFPNLNITIIDALNKRIKFLADLVGELELENV 123
Query: 174 QIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ RAE G K +FRE +DVA ARA+A + IL E LPLV VGG +A KG EE
Sbjct: 124 TVTHARAEEFGQKSSAFRETFDVATARALARLNILGELTLPLVEVGGALLAMKGSQADEE 183
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ + +A+ +G + + ++ P G AV+ + K + TPKKYPR PG P + PL
Sbjct: 184 LQEANKAITTLGGKIGE--QIDVTLPNGDPRAVIVINKVKPTPKKYPRKPGDPVRKPL 239
>gi|422846121|ref|ZP_16892804.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
gi|325688172|gb|EGD30191.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELDEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|168491204|ref|ZP_02715347.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|418193896|ref|ZP_12830387.1| methyltransferase GidB [Streptococcus pneumoniae GA47439]
gi|183574346|gb|EDT94874.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|353859116|gb|EHE39071.1| methyltransferase GidB [Streptococcus pneumoniae GA47439]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V + G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHLYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|306834178|ref|ZP_07467298.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
gi|304423751|gb|EFM26897.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 13/235 (5%)
Query: 56 FETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHC 115
FE +T Q++Q Y + L++WN+K+NLTA+ D V +H DS+A P ++ T
Sbjct: 22 FELTDT-QKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA--PVLQGKIT--- 75
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
N + L+D+G GAG P + + I CPD VT+++S+NKR FL L V
Sbjct: 76 ----NQAICLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLADELGLEGVHF 131
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE G+D FR YD+ ARAVA +++L E +P ++VGG +A K +EE+ +
Sbjct: 132 YHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEEELAD 191
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
++ A+ ++ + L+ + + P G + L K + TP KYPR G P K PL
Sbjct: 192 AKNAMTILFSKLID--NYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL 244
>gi|257081315|ref|ZP_05575676.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
gi|256989345|gb|EEU76647.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
Length = 238
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q Q Y L++WN KMNLTA+ + EV +H DS+++
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA----------FFED 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S+ + DVG GAG P + L I P VT+++S+NKR FL V+ L NV +
Sbjct: 67 FASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G+ FR +D ARAVA + +L+E CLPL + G F+A K +EE+ ++
Sbjct: 127 RAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLAKKEGYFLALKASKSEEEINEAKP 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + +R VV K + TPKKYPR PG P K P+
Sbjct: 187 AIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPI 237
>gi|419779107|ref|ZP_14304988.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK10]
gi|383186871|gb|EIC79336.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK10]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 11 AEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L
Sbjct: 68 S------NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE
Sbjct: 122 VHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 182 LLEAKNAINLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|419493434|ref|ZP_14033160.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47210]
gi|379593609|gb|EHZ58421.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47210]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKTGMPNKRPL 237
>gi|298502717|ref|YP_003724657.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|444382019|ref|ZP_21180224.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8106]
gi|444384536|ref|ZP_21182630.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8203]
gi|298238312|gb|ADI69443.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|444252296|gb|ELU58760.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8203]
gi|444253618|gb|ELU60073.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae PCS8106]
Length = 245
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 25 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 77 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 136 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 195
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 196 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|387783393|ref|YP_006069476.1| methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus salivarius JIM8777]
gi|338744275|emb|CCB94641.1| methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus salivarius JIM8777]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CP+ VT+++S+NKR FL +L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ +++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--PILNENYKLPNGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|317496585|ref|ZP_07954933.1| glucose inhibited division protein [Gemella morbillorum M424]
gi|316913292|gb|EFV34790.1| glucose inhibited division protein [Gemella morbillorum M424]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y + +++WN+K+NLTA+ + E +H DS+++ + + D S
Sbjct: 18 LSDIQKKQYEKYFELVVEWNQKINLTAITEEEEFYTKHFYDSISL--------SFYRDYS 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
SN+ DVG+GAG P + L I P +VT+++S+NKR FL L N +
Sbjct: 70 KVSNI--CDVGSGAGFPSIPLKILYPHLEVTIVDSLNKRIKFLNLLQEELGLTNCNFIHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+D +FRE +++ ARAVA + +L E CLPLV+ GG F++ K +EE +
Sbjct: 128 RAEEVGQDKNFRESFEIVTARAVARLNVLVELCLPLVKKGGYFLSLKAQKAEEETNEAIN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L Q +E +R + K++ TP KYPR G P K PL
Sbjct: 188 AIKLLGGKLEQ--DIEFDLEGEERHILEIRKTKETPNKYPRKAGLPNKKPL 236
>gi|421770512|ref|ZP_16207206.1| rRNA small subunit methyltransferase glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP2]
gi|421771731|ref|ZP_16208390.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP3]
gi|411181899|gb|EKS49058.1| rRNA small subunit methyltransferase glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP2]
gi|411185320|gb|EKS52449.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus rhamnosus LRHMDP3]
Length = 243
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P +++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQS 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QPLSLCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R QYD+ ARAVA + +LAE CLPL + G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQHGQFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE+ ++ A+ L+G L+Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPEELIAAKPAINLLGGKLVQDAALTLPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|418569376|ref|ZP_13133709.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21283]
gi|371985771|gb|EHP02825.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus 21283]
Length = 192
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 4/186 (2%)
Query: 107 IKNSYTSHCDS---SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEH 163
+K+ Y S S N + + DVG GAG P + L I P KVT+++S+NKR FL H
Sbjct: 5 LKHFYDSIAPSFYFDFNQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNH 64
Query: 164 AVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVA 223
S QL +V + RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA
Sbjct: 65 LASELQLQDVSFIHDRAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVA 123
Query: 224 AKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGT 283
K +EE++ ++ A+ ++G ++ + + E G+R + K R+TPKKYPR PGT
Sbjct: 124 LKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGT 183
Query: 284 PAKVPL 289
P K PL
Sbjct: 184 PNKTPL 189
>gi|422877005|ref|ZP_16923475.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
gi|332361813|gb|EGJ39617.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLKLLAEEIGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|387819921|ref|YP_005680268.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
gi|322807965|emb|CBZ05540.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
Length = 239
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q+ Y + + +WN+K+NLTA+ + +E++++H D + I K+S S
Sbjct: 18 FNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIF---KSSPIGEAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D ++TLL+S+ KR FL + QL N+Q + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +++ R++Y +AV+RAVA + +L+E+C+P V GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEIQHRQKYGIAVSRAVANLAVLSEFCIPFVEKGGYFIAMKGPSVEEEITAATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T K+YPR PG K PL
Sbjct: 188 SIEILGGKIEDIIKIDIEDTDLKHNLVIIKKVKETGKRYPRKPGIIKKNPL 238
>gi|334135628|ref|ZP_08509111.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF7]
gi|333606823|gb|EGL18154.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF7]
Length = 242
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 10/235 (4%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
H + + Q +Q Y L++WN K+NLTA+ + ++V +H DSL S +
Sbjct: 16 HQLSFSDEQLQQFETYYRLLVEWNEKINLTAITERDQVYLKHFYDSL--------SLAFY 67
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
D L D+G+GAG P + L IA P KVT+++S+NKR VFL V L +V
Sbjct: 68 VDMEKVDTL--ADIGSGAGFPSIPLKIAFPHLKVTIVDSLNKRIVFLNELVKELGLTDVT 125
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V RAE + R++YD+ ARAVA + +L E+CLP V+VGGLFVA K D +EE+K
Sbjct: 126 CVHARAEDAARLQQHRDRYDLVTARAVARLSVLNEFCLPFVKVGGLFVAMKAADAEEEMK 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ L+ L Q+ +E R + K+ TP KYPR G P K PL
Sbjct: 186 EAAFSIGLLKGRLKQVERLELPVEKSVRHFIQIQKTAPTPGKYPRKAGLPLKQPL 240
>gi|199597912|ref|ZP_03211337.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
gi|199591169|gb|EDY99250.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
Length = 243
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P +++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQS 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QPLSLCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R QYD+ ARAVA + +LAE CLPL + G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQHGQFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE+ ++ A+ L+G L+Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPEELIAAKPAINLLGGKLVQDAALTLPGTGDARHLLVIEKVKPTPNKYPRKPGMPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|293365141|ref|ZP_06611858.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|291316591|gb|EFE57027.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 245
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 19 AEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLI 75
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L
Sbjct: 76 S------NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLEG 129
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE
Sbjct: 130 VHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEE 189
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 190 LLEAKNALNLLFSKVEDNLSY--ALPNGDPRYITVVKKKKETPNKYPRKAGMPNKRPL 245
>gi|148994096|ref|ZP_01823436.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489112|ref|ZP_02713311.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|168493205|ref|ZP_02717348.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|221231973|ref|YP_002511125.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225854749|ref|YP_002736261.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|415698971|ref|ZP_11457368.1| methyltransferase GidB [Streptococcus pneumoniae 459-5]
gi|415749641|ref|ZP_11477585.1| methyltransferase GidB [Streptococcus pneumoniae SV35]
gi|415752327|ref|ZP_11479438.1| methyltransferase GidB [Streptococcus pneumoniae SV36]
gi|417679245|ref|ZP_12328642.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|417694197|ref|ZP_12343385.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
gi|418074057|ref|ZP_12711313.1| methyltransferase GidB [Streptococcus pneumoniae GA11184]
gi|418078750|ref|ZP_12715973.1| methyltransferase GidB [Streptococcus pneumoniae 4027-06]
gi|418089659|ref|ZP_12726815.1| methyltransferase GidB [Streptococcus pneumoniae GA43265]
gi|418098632|ref|ZP_12735731.1| methyltransferase GidB [Streptococcus pneumoniae 6901-05]
gi|418105352|ref|ZP_12742410.1| methyltransferase GidB [Streptococcus pneumoniae GA44500]
gi|418114830|ref|ZP_12751818.1| methyltransferase GidB [Streptococcus pneumoniae 5787-06]
gi|418116994|ref|ZP_12753964.1| methyltransferase GidB [Streptococcus pneumoniae 6963-05]
gi|418125921|ref|ZP_12762829.1| methyltransferase GidB [Streptococcus pneumoniae GA44511]
gi|418135324|ref|ZP_12772180.1| methyltransferase GidB [Streptococcus pneumoniae GA11426]
gi|418137310|ref|ZP_12774150.1| methyltransferase GidB [Streptococcus pneumoniae GA11663]
gi|418173645|ref|ZP_12810258.1| methyltransferase GidB [Streptococcus pneumoniae GA41277]
gi|418191837|ref|ZP_12828340.1| methyltransferase GidB [Streptococcus pneumoniae GA47388]
gi|418214470|ref|ZP_12841205.1| methyltransferase GidB [Streptococcus pneumoniae GA54644]
gi|418216714|ref|ZP_12843437.1| methyltransferase GidB [Streptococcus pneumoniae Netherlands15B-37]
gi|418234481|ref|ZP_12861059.1| methyltransferase GidB [Streptococcus pneumoniae GA08780]
gi|419440489|ref|ZP_13980537.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40410]
gi|419464701|ref|ZP_14004593.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04175]
gi|419469122|ref|ZP_14008993.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA06083]
gi|419473325|ref|ZP_14013176.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13430]
gi|419484509|ref|ZP_14024285.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43257]
gi|419508352|ref|ZP_14048005.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49542]
gi|421220434|ref|ZP_15677278.1| methyltransferase GidB [Streptococcus pneumoniae 2070425]
gi|421222744|ref|ZP_15679530.1| methyltransferase GidB [Streptococcus pneumoniae 2070531]
gi|421279060|ref|ZP_15729867.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17301]
gi|421281245|ref|ZP_15732043.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04672]
gi|421294331|ref|ZP_15745054.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56113]
gi|421301147|ref|ZP_15751817.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19998]
gi|254766905|sp|B8ZJU9.1|RSMG_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766907|sp|C1CEP0.1|RSMG_STRZJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147927449|gb|EDK78478.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572467|gb|EDT92995.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|183576802|gb|EDT97330.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|220674433|emb|CAR68986.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225723304|gb|ACO19157.1| methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|332073624|gb|EGI84103.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|332203134|gb|EGJ17202.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
gi|353747941|gb|EHD28597.1| methyltransferase GidB [Streptococcus pneumoniae 4027-06]
gi|353749557|gb|EHD30201.1| methyltransferase GidB [Streptococcus pneumoniae GA11184]
gi|353761657|gb|EHD42223.1| methyltransferase GidB [Streptococcus pneumoniae GA43265]
gi|353769992|gb|EHD50508.1| methyltransferase GidB [Streptococcus pneumoniae 6901-05]
gi|353777417|gb|EHD57890.1| methyltransferase GidB [Streptococcus pneumoniae GA44500]
gi|353786343|gb|EHD66756.1| methyltransferase GidB [Streptococcus pneumoniae 5787-06]
gi|353789355|gb|EHD69750.1| methyltransferase GidB [Streptococcus pneumoniae 6963-05]
gi|353796702|gb|EHD77041.1| methyltransferase GidB [Streptococcus pneumoniae GA44511]
gi|353838462|gb|EHE18540.1| methyltransferase GidB [Streptococcus pneumoniae GA41277]
gi|353856910|gb|EHE36877.1| methyltransferase GidB [Streptococcus pneumoniae GA47388]
gi|353871753|gb|EHE51624.1| methyltransferase GidB [Streptococcus pneumoniae GA54644]
gi|353872306|gb|EHE52172.1| methyltransferase GidB [Streptococcus pneumoniae Netherlands15B-37]
gi|353887772|gb|EHE67549.1| methyltransferase GidB [Streptococcus pneumoniae GA08780]
gi|353901301|gb|EHE76845.1| methyltransferase GidB [Streptococcus pneumoniae GA11663]
gi|353901472|gb|EHE77014.1| methyltransferase GidB [Streptococcus pneumoniae GA11426]
gi|379537735|gb|EHZ02917.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04175]
gi|379547225|gb|EHZ12363.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA06083]
gi|379552832|gb|EHZ17921.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13430]
gi|379578629|gb|EHZ43538.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40410]
gi|379584020|gb|EHZ48897.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43257]
gi|379612070|gb|EHZ76792.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49542]
gi|381310023|gb|EIC50856.1| methyltransferase GidB [Streptococcus pneumoniae SV36]
gi|381316495|gb|EIC57243.1| methyltransferase GidB [Streptococcus pneumoniae 459-5]
gi|381317935|gb|EIC58660.1| methyltransferase GidB [Streptococcus pneumoniae SV35]
gi|395587550|gb|EJG47897.1| methyltransferase GidB [Streptococcus pneumoniae 2070425]
gi|395587806|gb|EJG48148.1| methyltransferase GidB [Streptococcus pneumoniae 2070531]
gi|395879672|gb|EJG90729.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17301]
gi|395882406|gb|EJG93453.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA04672]
gi|395894621|gb|EJH05601.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56113]
gi|395898707|gb|EJH09651.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19998]
Length = 237
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|15901145|ref|NP_345749.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae TIGR4]
gi|111658512|ref|ZP_01409178.1| hypothetical protein SpneT_02000339 [Streptococcus pneumoniae
TIGR4]
gi|148998925|ref|ZP_01826360.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149019281|ref|ZP_01834643.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|168484499|ref|ZP_02709451.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|168487454|ref|ZP_02711962.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|168575740|ref|ZP_02721655.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194397570|ref|YP_002037888.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225859081|ref|YP_002740591.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225860884|ref|YP_002742393.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230786|ref|ZP_06964467.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254276|ref|ZP_06977862.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067934|ref|YP_003876900.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|387626575|ref|YP_006062750.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|387788083|ref|YP_006253151.1| glucose-inhibited division protein B [Streptococcus pneumoniae
ST556]
gi|417312811|ref|ZP_12099523.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|417696474|ref|ZP_12345653.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
gi|417698685|ref|ZP_12347857.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|418083184|ref|ZP_12720383.1| methyltransferase GidB [Streptococcus pneumoniae GA44288]
gi|418085325|ref|ZP_12722507.1| methyltransferase GidB [Streptococcus pneumoniae GA47281]
gi|418086985|ref|ZP_12724155.1| methyltransferase GidB [Streptococcus pneumoniae GA47033]
gi|418091912|ref|ZP_12729054.1| methyltransferase GidB [Streptococcus pneumoniae GA44452]
gi|418094091|ref|ZP_12731218.1| methyltransferase GidB [Streptococcus pneumoniae GA49138]
gi|418096375|ref|ZP_12733488.1| methyltransferase GidB [Streptococcus pneumoniae GA16531]
gi|418100315|ref|ZP_12737403.1| methyltransferase GidB [Streptococcus pneumoniae 7286-06]
gi|418103000|ref|ZP_12740074.1| methyltransferase GidB [Streptococcus pneumoniae NP070]
gi|418107709|ref|ZP_12744747.1| methyltransferase GidB [Streptococcus pneumoniae GA41410]
gi|418110255|ref|ZP_12747278.1| methyltransferase GidB [Streptococcus pneumoniae GA49447]
gi|418119989|ref|ZP_12756940.1| methyltransferase GidB [Streptococcus pneumoniae GA18523]
gi|418121325|ref|ZP_12758269.1| methyltransferase GidB [Streptococcus pneumoniae GA44194]
gi|418130443|ref|ZP_12767326.1| methyltransferase GidB [Streptococcus pneumoniae GA07643]
gi|418141845|ref|ZP_12778658.1| methyltransferase GidB [Streptococcus pneumoniae GA13455]
gi|418146490|ref|ZP_12783270.1| methyltransferase GidB [Streptococcus pneumoniae GA13637]
gi|418148684|ref|ZP_12785449.1| methyltransferase GidB [Streptococcus pneumoniae GA13856]
gi|418150741|ref|ZP_12787489.1| methyltransferase GidB [Streptococcus pneumoniae GA14798]
gi|418153002|ref|ZP_12789741.1| methyltransferase GidB [Streptococcus pneumoniae GA16121]
gi|418157243|ref|ZP_12793959.1| methyltransferase GidB [Streptococcus pneumoniae GA16833]
gi|418164595|ref|ZP_12801265.1| methyltransferase GidB [Streptococcus pneumoniae GA17371]
gi|418169307|ref|ZP_12805950.1| methyltransferase GidB [Streptococcus pneumoniae GA19077]
gi|418171138|ref|ZP_12807765.1| methyltransferase GidB [Streptococcus pneumoniae GA19451]
gi|418185091|ref|ZP_12821635.1| methyltransferase GidB [Streptococcus pneumoniae GA47283]
gi|418187291|ref|ZP_12823817.1| methyltransferase GidB [Streptococcus pneumoniae GA47360]
gi|418189517|ref|ZP_12826032.1| methyltransferase GidB [Streptococcus pneumoniae GA47373]
gi|418198088|ref|ZP_12834548.1| methyltransferase GidB [Streptococcus pneumoniae GA47778]
gi|418202522|ref|ZP_12838952.1| methyltransferase GidB [Streptococcus pneumoniae GA52306]
gi|418219024|ref|ZP_12845691.1| methyltransferase GidB [Streptococcus pneumoniae NP127]
gi|418221337|ref|ZP_12847990.1| methyltransferase GidB [Streptococcus pneumoniae GA47751]
gi|418223320|ref|ZP_12849961.1| methyltransferase GidB [Streptococcus pneumoniae 5185-06]
gi|418227843|ref|ZP_12854461.1| methyltransferase GidB [Streptococcus pneumoniae 3063-00]
gi|418238846|ref|ZP_12865399.1| methyltransferase GidB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422851|ref|ZP_13963066.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43264]
gi|419425281|ref|ZP_13965478.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7533-05]
gi|419427231|ref|ZP_13967414.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 5652-06]
gi|419429409|ref|ZP_13969576.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA11856]
gi|419436126|ref|ZP_13976216.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 8190-05]
gi|419438360|ref|ZP_13978430.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13499]
gi|419444534|ref|ZP_13984549.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19923]
gi|419446666|ref|ZP_13986671.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7879-04]
gi|419448890|ref|ZP_13988887.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 4075-00]
gi|419451593|ref|ZP_13991579.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP02]
gi|419460116|ref|ZP_14000045.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02270]
gi|419462448|ref|ZP_14002354.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02714]
gi|419471208|ref|ZP_14011067.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA07914]
gi|419475659|ref|ZP_14015499.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14688]
gi|419477940|ref|ZP_14017764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA18068]
gi|419482316|ref|ZP_14022107.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40563]
gi|419486816|ref|ZP_14026580.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44128]
gi|419488328|ref|ZP_14028081.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44386]
gi|419491170|ref|ZP_14030909.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47179]
gi|419495551|ref|ZP_14035269.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47461]
gi|419501989|ref|ZP_14041673.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47628]
gi|419504062|ref|ZP_14043731.1| 16S rRNA small subunit methyltransferase GidB [Streptococcus
pneumoniae GA47760]
gi|419506196|ref|ZP_14045857.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49194]
gi|419509864|ref|ZP_14049508.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae NP141]
gi|419519047|ref|ZP_14058653.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA08825]
gi|419526020|ref|ZP_14065582.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14373]
gi|419528667|ref|ZP_14068209.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17719]
gi|419529846|ref|ZP_14069377.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40028]
gi|419532476|ref|ZP_14071992.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47794]
gi|421206746|ref|ZP_15663801.1| methyltransferase GidB [Streptococcus pneumoniae 2090008]
gi|421209120|ref|ZP_15666135.1| methyltransferase GidB [Streptococcus pneumoniae 2070005]
gi|421213340|ref|ZP_15670297.1| methyltransferase GidB [Streptococcus pneumoniae 2070108]
gi|421215583|ref|ZP_15672504.1| methyltransferase GidB [Streptococcus pneumoniae 2070109]
gi|421217880|ref|ZP_15674778.1| methyltransferase GidB [Streptococcus pneumoniae 2070335]
gi|421229923|ref|ZP_15686590.1| methyltransferase GidB [Streptococcus pneumoniae 2061376]
gi|421234259|ref|ZP_15690879.1| methyltransferase GidB [Streptococcus pneumoniae 2061617]
gi|421236404|ref|ZP_15693002.1| methyltransferase GidB [Streptococcus pneumoniae 2071004]
gi|421238895|ref|ZP_15695461.1| methyltransferase GidB [Streptococcus pneumoniae 2071247]
gi|421240814|ref|ZP_15697359.1| methyltransferase GidB [Streptococcus pneumoniae 2080913]
gi|421243214|ref|ZP_15699733.1| methyltransferase GidB [Streptococcus pneumoniae 2081074]
gi|421245171|ref|ZP_15701670.1| methyltransferase GidB [Streptococcus pneumoniae 2081685]
gi|421247542|ref|ZP_15704028.1| methyltransferase GidB [Streptococcus pneumoniae 2082170]
gi|421249569|ref|ZP_15706027.1| methyltransferase GidB [Streptococcus pneumoniae 2082239]
gi|421270709|ref|ZP_15721564.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR48]
gi|421272859|ref|ZP_15723701.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR55]
gi|421275002|ref|ZP_15725832.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA52612]
gi|421285038|ref|ZP_15735815.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60190]
gi|421287409|ref|ZP_15738175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58771]
gi|421292197|ref|ZP_15742932.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56348]
gi|421298724|ref|ZP_15749412.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60080]
gi|421303451|ref|ZP_15754115.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17484]
gi|421307598|ref|ZP_15758241.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60132]
gi|421313746|ref|ZP_15764336.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47562]
gi|20177896|sp|Q97QD4.1|RSMG_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797832|sp|B5E522.1|RSMG_STRP4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766904|sp|C1C7R5.1|RSMG_STRP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766909|sp|C1CR21.1|RSMG_STRZT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14972770|gb|AAK75389.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TIGR4]
gi|147755235|gb|EDK62287.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147931151|gb|EDK82130.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|172042251|gb|EDT50297.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|183569712|gb|EDT90240.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|183578267|gb|EDT98795.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194357237|gb|ACF55685.1| methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225722107|gb|ACO17961.1| methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225726989|gb|ACO22840.1| methyltransferase GidB [Streptococcus pneumoniae Taiwan19F-14]
gi|301794360|emb|CBW36788.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|306409471|gb|ADM84898.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|327389519|gb|EGE87864.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|332200730|gb|EGJ14802.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|332201749|gb|EGJ15819.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
gi|353755260|gb|EHD35865.1| methyltransferase GidB [Streptococcus pneumoniae GA44288]
gi|353757280|gb|EHD37874.1| methyltransferase GidB [Streptococcus pneumoniae GA47281]
gi|353759246|gb|EHD39832.1| methyltransferase GidB [Streptococcus pneumoniae GA47033]
gi|353764012|gb|EHD44562.1| methyltransferase GidB [Streptococcus pneumoniae GA44452]
gi|353764587|gb|EHD45135.1| methyltransferase GidB [Streptococcus pneumoniae GA49138]
gi|353769379|gb|EHD49897.1| methyltransferase GidB [Streptococcus pneumoniae GA16531]
gi|353773024|gb|EHD53523.1| methyltransferase GidB [Streptococcus pneumoniae 7286-06]
gi|353775633|gb|EHD56113.1| methyltransferase GidB [Streptococcus pneumoniae NP070]
gi|353779892|gb|EHD60356.1| methyltransferase GidB [Streptococcus pneumoniae GA41410]
gi|353782458|gb|EHD62892.1| methyltransferase GidB [Streptococcus pneumoniae GA49447]
gi|353789102|gb|EHD69498.1| methyltransferase GidB [Streptococcus pneumoniae GA18523]
gi|353793227|gb|EHD73596.1| methyltransferase GidB [Streptococcus pneumoniae GA44194]
gi|353801767|gb|EHD82067.1| methyltransferase GidB [Streptococcus pneumoniae GA07643]
gi|353806096|gb|EHD86370.1| methyltransferase GidB [Streptococcus pneumoniae GA13455]
gi|353813359|gb|EHD93592.1| methyltransferase GidB [Streptococcus pneumoniae GA13856]
gi|353813698|gb|EHD93926.1| methyltransferase GidB [Streptococcus pneumoniae GA13637]
gi|353815167|gb|EHD95388.1| methyltransferase GidB [Streptococcus pneumoniae GA14798]
gi|353817553|gb|EHD97755.1| methyltransferase GidB [Streptococcus pneumoniae GA16121]
gi|353823691|gb|EHE03865.1| methyltransferase GidB [Streptococcus pneumoniae GA16833]
gi|353829456|gb|EHE09587.1| methyltransferase GidB [Streptococcus pneumoniae GA17371]
gi|353834492|gb|EHE14593.1| methyltransferase GidB [Streptococcus pneumoniae GA19077]
gi|353837308|gb|EHE17394.1| methyltransferase GidB [Streptococcus pneumoniae GA19451]
gi|353849410|gb|EHE29416.1| methyltransferase GidB [Streptococcus pneumoniae GA47283]
gi|353851447|gb|EHE31442.1| methyltransferase GidB [Streptococcus pneumoniae GA47360]
gi|353856659|gb|EHE36628.1| methyltransferase GidB [Streptococcus pneumoniae GA47373]
gi|353862726|gb|EHE42656.1| methyltransferase GidB [Streptococcus pneumoniae GA47778]
gi|353868325|gb|EHE48215.1| methyltransferase GidB [Streptococcus pneumoniae GA52306]
gi|353874647|gb|EHE54501.1| methyltransferase GidB [Streptococcus pneumoniae GA47751]
gi|353875679|gb|EHE55531.1| methyltransferase GidB [Streptococcus pneumoniae NP127]
gi|353879446|gb|EHE59272.1| methyltransferase GidB [Streptococcus pneumoniae 5185-06]
gi|353882071|gb|EHE61883.1| methyltransferase GidB [Streptococcus pneumoniae 3063-00]
gi|353893248|gb|EHE72994.1| methyltransferase GidB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379137825|gb|AFC94616.1| glucose-inhibited division protein B [Streptococcus pneumoniae
ST556]
gi|379531121|gb|EHY96356.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02270]
gi|379531919|gb|EHY97152.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA02714]
gi|379538365|gb|EHZ03546.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13499]
gi|379545924|gb|EHZ11063.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA07914]
gi|379551357|gb|EHZ16452.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA11856]
gi|379558280|gb|EHZ23316.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14373]
gi|379561204|gb|EHZ26225.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA14688]
gi|379564690|gb|EHZ29686.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17719]
gi|379565376|gb|EHZ30368.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA18068]
gi|379572227|gb|EHZ37184.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA19923]
gi|379574586|gb|EHZ39524.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40028]
gi|379579856|gb|EHZ44753.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40563]
gi|379586525|gb|EHZ51376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44128]
gi|379587377|gb|EHZ52225.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA43264]
gi|379590443|gb|EHZ55281.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA44386]
gi|379593306|gb|EHZ58119.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47179]
gi|379595633|gb|EHZ60441.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47461]
gi|379600202|gb|EHZ64983.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47628]
gi|379606260|gb|EHZ71009.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47794]
gi|379606739|gb|EHZ71486.1| 16S rRNA small subunit methyltransferase GidB [Streptococcus
pneumoniae GA47760]
gi|379608110|gb|EHZ72856.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA49194]
gi|379614206|gb|EHZ78916.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7879-04]
gi|379615146|gb|EHZ79855.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 8190-05]
gi|379618684|gb|EHZ83359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 5652-06]
gi|379619718|gb|EHZ84388.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 7533-05]
gi|379623298|gb|EHZ87932.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP02]
gi|379623948|gb|EHZ88581.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae 4075-00]
gi|379633057|gb|EHZ97626.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae NP141]
gi|379640884|gb|EIA05422.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA08825]
gi|395574182|gb|EJG34764.1| methyltransferase GidB [Streptococcus pneumoniae 2070005]
gi|395575543|gb|EJG36111.1| methyltransferase GidB [Streptococcus pneumoniae 2090008]
gi|395579572|gb|EJG40070.1| methyltransferase GidB [Streptococcus pneumoniae 2070108]
gi|395579790|gb|EJG40285.1| methyltransferase GidB [Streptococcus pneumoniae 2070109]
gi|395583954|gb|EJG44379.1| methyltransferase GidB [Streptococcus pneumoniae 2070335]
gi|395594455|gb|EJG54691.1| methyltransferase GidB [Streptococcus pneumoniae 2061376]
gi|395601207|gb|EJG61356.1| methyltransferase GidB [Streptococcus pneumoniae 2061617]
gi|395601332|gb|EJG61480.1| methyltransferase GidB [Streptococcus pneumoniae 2071247]
gi|395602249|gb|EJG62392.1| methyltransferase GidB [Streptococcus pneumoniae 2071004]
gi|395607192|gb|EJG67289.1| methyltransferase GidB [Streptococcus pneumoniae 2080913]
gi|395608607|gb|EJG68700.1| methyltransferase GidB [Streptococcus pneumoniae 2081685]
gi|395608802|gb|EJG68894.1| methyltransferase GidB [Streptococcus pneumoniae 2081074]
gi|395613913|gb|EJG73938.1| methyltransferase GidB [Streptococcus pneumoniae 2082239]
gi|395614363|gb|EJG74384.1| methyltransferase GidB [Streptococcus pneumoniae 2082170]
gi|395867838|gb|EJG78958.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR48]
gi|395874113|gb|EJG85201.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA52612]
gi|395874513|gb|EJG85596.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae SPAR55]
gi|395887017|gb|EJG98032.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60190]
gi|395889818|gb|EJH00825.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58771]
gi|395892325|gb|EJH03316.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA56348]
gi|395902073|gb|EJH13009.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17484]
gi|395902680|gb|EJH13613.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60080]
gi|395907511|gb|EJH18402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA60132]
gi|395914246|gb|EJH25090.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47562]
Length = 237
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|298252131|ref|ZP_06975934.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
gi|297546723|gb|EFH80591.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
Length = 247
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 125/222 (56%), Gaps = 14/222 (6%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI--IPPIKNSYTSHCDSSCNSNLKLVD 127
Y LL+WN + NLTA+KD EVM +H DSL++ I P + T L+D
Sbjct: 37 YRQELLEWNTRFNLTAIKDPEEVMTKHFLDSLSLLAIYPQDEATT------------LLD 84
Query: 128 VGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187
+GTG G PGL L +A P W+VTL+E+ NK+ FL H V + +L +V+++ GRAE LG+
Sbjct: 85 IGTGPGFPGLPLKMARPRWRVTLVEATNKKVTFLRHMVDVLELEHVEVIHGRAEELGQKA 144
Query: 188 SFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 247
++R +D+ ARAVA + L EYC P RVGG + K + Q+E+ +RA +GA L
Sbjct: 145 AYRSAFDLVTARAVAALPALLEYCAPYCRVGGAIILPKKGELQDEMAQGKRAAAQVGAVL 204
Query: 248 LQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
V+ R + + +R P++YPR AK PL
Sbjct: 205 EADTVVDLPGINDGRRLLTWRQQKRCPEQYPRSGAAMAKRPL 246
>gi|307703679|ref|ZP_07640620.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|307622514|gb|EFO01510.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 11 AEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L
Sbjct: 68 S------NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLEG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE
Sbjct: 122 VHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 182 LLEAKNALNLLFSKVEDNLSY--ALPNGDPRYITVVKKKKETPNKYPRKAGMPNKRPL 237
>gi|399889380|ref|ZP_10775257.1| 16S rRNA methyltransferase GidB [Clostridium arbusti SL206]
Length = 239
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N + + Y + + +WN K+NLTA+ + E++++H DSL I K + + S
Sbjct: 18 FNKDKYNKFIQYKNLIQEWNEKINLTAITEDEEIVKKHFIDSLKIF---KFEFLKNAKS- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D +V LL+S+NKR FL ++ L + + G
Sbjct: 74 ------LIDIGTGAGFPGIPIKIINEDIQVVLLDSLNKRINFLNEVINKLDLQGITTIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE +DV +RAVA M +L+E+C+P V+V G F+A KG +E+ S+
Sbjct: 128 RAEDFSRKNEYREMFDVVTSRAVANMTVLSEFCIPYVKVSGYFIALKGPSIDDEIIASKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + + VE + + V+ K ++TP ++PR G K PL
Sbjct: 188 AIATLGGKVEDIIKVEIEESDLKHNLVIVKKVKKTPNQFPRKAGVVTKKPL 238
>gi|400289514|ref|ZP_10791543.1| 16S rRNA methyltransferase GidB [Streptococcus ratti FA-1 = DSM
20564]
gi|399922152|gb|EJN94967.1| 16S rRNA methyltransferase GidB [Streptococcus ratti FA-1 = DSM
20564]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 130/238 (54%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ Q+ Q Y L++WN K+NLTA+ +V +H DS A I
Sbjct: 11 AKHQINLSDWQKRQFDSYFKLLVEWNEKINLTAITQEKDVYLKHFYDSAAPI-------L 63
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
C N LKL+D+G GAG P L + I P+ +VT+++S+NKR FL+ +L N
Sbjct: 64 EGCIK--NEPLKLLDIGAGAGFPSLPMKIIYPNLEVTIIDSLNKRIKFLQILADELELTN 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE LG+D FR Q+D ARAVA M++LAE +P ++VGG +A K EE
Sbjct: 122 VHFYHGRAEDLGQDKQFRAQFDAVTARAVARMQVLAELTVPFLKVGGQLLALKASAADEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A++++ + + + Q P G +R + K + TP KYPR G P K PL
Sbjct: 182 IAAAQNALKVLFSQV--SGNYHYQLPNGDERNLTLVTKKKETPNKYPRKAGIPNKKPL 237
>gi|258507237|ref|YP_003169988.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|258538424|ref|YP_003172923.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus Lc 705]
gi|385826958|ref|YP_005864730.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|385834176|ref|YP_005871950.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Lactobacillus
rhamnosus ATCC 8530]
gi|257147164|emb|CAR86137.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus GG]
gi|257150100|emb|CAR89072.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus Lc 705]
gi|259648603|dbj|BAI40765.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|355393667|gb|AER63097.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Lactobacillus
rhamnosus ATCC 8530]
Length = 243
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P +++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQS 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QPLSLCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R QYD+ ARAVA + +LAE CLPL + G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQHGQFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE+ ++ A+ L+G L+Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPEELIAAKPAINLLGGKLVQDAALTLPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|358464656|ref|ZP_09174617.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 058
str. F0407]
gi|357066623|gb|EHI76765.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 058
str. F0407]
Length = 245
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 25 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 77 -NKDIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELGLDGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 136 RAEDFAQDKNFRAQFDMVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 195
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 196 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|241889363|ref|ZP_04776664.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
gi|241863906|gb|EER68287.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 12/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q++Q Y D +++WN+K+NLTA+ + +E +H DS+++ Y S+ +S
Sbjct: 18 LSELQKDQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISL--AFYKDY-SNIESI 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C DVG+GAG P + L I P+ KVT+++S+NKR FL L + V
Sbjct: 75 C-------DVGSGAGFPSIPLKILYPNLKVTIVDSLNKRIKFLNLVKDELGLTDCNFVHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +RE +++ ARAVA + ILAE CLPLV+ G F++ K +EE +
Sbjct: 128 RAEEFGQNKEYRESFEIVTARAVARLNILAELCLPLVKKDGYFLSLKAQKAEEETNEAIN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G L + + + +R + K++ TP KYPR GTP K PL
Sbjct: 188 AIKLLGGKLEKDLEFDIEGE--ERHILEIRKAKETPNKYPRKAGTPNKKPL 236
>gi|418967066|ref|ZP_13518751.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK616]
gi|383345446|gb|EID23568.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK616]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN+K+NLTA+ D +EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNKKINLTAITDKDEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NENIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQAKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|307704983|ref|ZP_07641870.1| methyltransferase GidB [Streptococcus mitis SK597]
gi|307621434|gb|EFO00484.1| methyltransferase GidB [Streptococcus mitis SK597]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N N+KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NENIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|421878387|ref|ZP_16309868.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C11]
gi|390447756|emb|CCF25988.1| Ribosomal RNA small subunit methyltransferase G [Leuconostoc
citreum LBAE C11]
Length = 239
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q EQ Y + L++ N++ NLTA+ D +V +H DSL + +K H S
Sbjct: 16 TLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKA--LQHQSS 73
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+DVGTGAG P L L IA P K+T+++++ KR FL+ V L NV IV
Sbjct: 74 T------LIDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++V++REQ+D A ARA+A +LAEY LP V+VGG + KG ++E+ + +
Sbjct: 128 GRAEDIGQNVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G ++ + + + P G QR V K ++TPKKYPR GTP K P+
Sbjct: 188 QALATLGGTV--SSAFDFKLPNGDQRVIQVVDKYKKTPKKYPRQAGTPNKKPI 238
>gi|258517427|ref|YP_003193649.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
gi|257781132|gb|ACV65026.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
Length = 236
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 137/234 (58%), Gaps = 14/234 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q Q + + ++ N+ NLTA+ +V+ RH DSL+ + +
Sbjct: 15 SLSLDQVRQFIKFYNLIVLGNQACNLTAITAQQDVVVRHFLDSLSCVKAV---------- 64
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S + +L+ +DVGTGAG PG+ L I P V L+ES+NK+ FL++ V L N+ + +
Sbjct: 65 SFDGDLRFIDVGTGAGFPGIPLKIMYPRLSVVLIESINKKVNFLKNTVKELGLNNIDVAQ 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G + FRE++D ARAVA++ ILAEYCLPLV++GG F+A KG ++E+ +
Sbjct: 125 LRAEEAGTLIDFRERFDRVTARAVAQLNILAEYCLPLVKIGGYFIALKGPSMEDELYRAI 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + +V+ + P+ + RT + K R TPK YPR G PAK PL
Sbjct: 185 PAIEKLGGLIEN--NVKIRLPYTEEGRTLIAIRKIRNTPKMYPRRIGLPAKKPL 236
>gi|419431670|ref|ZP_13971810.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP05]
gi|419497445|ref|ZP_14037154.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47522]
gi|421309697|ref|ZP_15760324.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62681]
gi|379600914|gb|EHZ65693.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA47522]
gi|379630237|gb|EHZ94827.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP05]
gi|395911118|gb|EJH21987.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA62681]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D +EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLNVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|418071640|ref|ZP_12708914.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus R0011]
gi|357539134|gb|EHJ23154.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus R0011]
Length = 243
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P +++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQS 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QPLSLCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R QYD+ ARAVA + +LAE CLPL + G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQHGQFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE+ ++ A+ L+G L+Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPEELIAAKPAINLLGGKLVQDAALTLPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|303254470|ref|ZP_07340575.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|303258921|ref|ZP_07344900.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|303264274|ref|ZP_07350194.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
gi|302598556|gb|EFL65597.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|302639864|gb|EFL70320.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|302646086|gb|EFL76313.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
Length = 237
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFECYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|421312129|ref|ZP_15762732.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58981]
gi|395910558|gb|EJH21430.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA58981]
Length = 237
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSRVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|340398132|ref|YP_004727157.1| methyltransferase gidB [Streptococcus salivarius CCHSS3]
gi|338742125|emb|CCB92630.1| methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus salivarius CCHSS3]
Length = 237
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CP+ VT+++S+NKR FL +L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ +++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--PVLNENYKLPNGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|418162343|ref|ZP_12799027.1| methyltransferase GidB [Streptococcus pneumoniae GA17328]
gi|418182900|ref|ZP_12819460.1| methyltransferase GidB [Streptococcus pneumoniae GA43380]
gi|418195491|ref|ZP_12831971.1| methyltransferase GidB [Streptococcus pneumoniae GA47688]
gi|419453303|ref|ZP_13993276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP03]
gi|353827772|gb|EHE07921.1| methyltransferase GidB [Streptococcus pneumoniae GA17328]
gi|353849041|gb|EHE29051.1| methyltransferase GidB [Streptococcus pneumoniae GA43380]
gi|353862018|gb|EHE41951.1| methyltransferase GidB [Streptococcus pneumoniae GA47688]
gi|379627012|gb|EHZ91628.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP03]
Length = 229
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 9 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 60
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 61 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 119
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 120 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 179
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 180 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 229
>gi|357638100|ref|ZP_09135973.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
urinalis 2285-97]
gi|418417173|ref|ZP_12990371.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
urinalis FB127-CNA-2]
gi|357586554|gb|EHJ55962.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
urinalis 2285-97]
gi|410873229|gb|EKS21165.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
urinalis FB127-CNA-2]
Length = 237
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y L++WN+K+NLT + + NEV +H DS+A PI Y
Sbjct: 17 LSQKQKEQFETYFKLLVEWNQKINLTTITEKNEVYLKHFYDSIA---PILQGYLK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + ++D+G GAG P L + I P +T+++S+NKR FL L V G
Sbjct: 69 -NEKISILDIGAGAGFPSLPMKIIFPQLDITIIDSLNKRIQFLNLLADTLDLKGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ FR ++D+ ARAVA M++L+E +P +++ G +A K +E+++++
Sbjct: 128 RAEDFGQNPDFRAKFDIVTARAVARMQVLSELTIPFLKIDGQLIALKASAADQELEDAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ + A +++ + P G R + K + TPKKYPR G P K PL
Sbjct: 188 ALTFLFAKVIE--NQHYHLPNGDDRYLTIVEKKKETPKKYPRKAGIPNKKPL 237
>gi|451822606|ref|YP_007458807.1| ribosomal RNA small subunit methyltransferase G [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788585|gb|AGF59553.1| ribosomal RNA small subunit methyltransferase G [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 239
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 129/228 (56%), Gaps = 10/228 (4%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
Q E+ ++ L +WN K+NLTA+ + E++++H DS IK + N
Sbjct: 21 EQYEKFIDFMKLLQEWNEKINLTAIVEDEEIVKKHFIDS------IKAFKADEVKKAKN- 73
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
++DVGTGAG PG+ ++I + +VTLL+S+NKR FL ++ L NV+ + RAE
Sbjct: 74 ---MIDVGTGAGFPGIPISIMQENLEVTLLDSLNKRINFLNTVINKLGLSNVKTIHSRAE 130
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
+D RE++D+A +RAVA M +L+E CLP +VGG F+A KG ++E+ S A++
Sbjct: 131 DGARDSKLREKFDIATSRAVANMSVLSELCLPYAKVGGNFIALKGPSVEQEINESLNAIK 190
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++G L+ +C + + + V K + PK YPR G K P+
Sbjct: 191 VLGGELVNICEINIEDTELRHNLVTVRKIKECPKNYPRKAGLITKNPI 238
>gi|421488658|ref|ZP_15936046.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK304]
gi|400367875|gb|EJP20890.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK304]
Length = 237
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKSQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELSEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|420157475|ref|ZP_14664309.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. MSTE9]
gi|394756181|gb|EJF39306.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Clostridium
sp. MSTE9]
Length = 237
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 133/237 (56%), Gaps = 22/237 (9%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+++ +Q Y++ LL+WN KMNLTA+ + +V+E+H DSL ++ ++
Sbjct: 18 SISAQQAAAFQTYMELLLEWNEKMNLTAITEPQQVVEKHFLDSLLLLKAVE--------- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N K++DVGTGAG PG+ L + D ++TLL+S+ KR FL+ AV L+ +++
Sbjct: 69 -IPENAKVIDVGTGAGFPGIPLLLYRTDIRLTLLDSLQKRLNFLQ-AVCDALGLSAELIH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+ REQ+D+A ARAVA + IL EYCLP VR GG F A KG EE ++
Sbjct: 127 ARAEEGGRQPKLREQFDLACARAVAPLPILCEYCLPFVRRGGAFAAMKGPGAAEESVAAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPF-----GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++GA ES F +R ++C K+ KYPR AK PL
Sbjct: 187 KAISILGA------RTESTQSFTLPDGSERNVIICRKTAAMSDKYPRHGSKIAKSPL 237
>gi|148543343|ref|YP_001270713.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri DSM 20016]
gi|184152753|ref|YP_001841094.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri JCM 1112]
gi|227364417|ref|ZP_03848507.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|325683616|ref|ZP_08163132.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
gi|166989746|sp|A5VHQ2.1|RSMG_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797827|sp|B2G582.1|RSMG_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148530377|gb|ABQ82376.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus reuteri DSM
20016]
gi|183224097|dbj|BAG24614.1| glucose-inhibited division protein B [Lactobacillus reuteri JCM
1112]
gi|227070510|gb|EEI08843.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|324977966|gb|EGC14917.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
Length = 241
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNS 110
+ H TL+ Q +Q Y L++ N +NLT + + NEV +H DS+ A P S
Sbjct: 11 ADHGITLSAEQMQQFADYYQLLVETNEHVNLTRITEKNEVYLKHFYDSITGAFAEPRLES 70
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
+L L D+G GAG P L L IA P KVT+++S+NKR FLE V+ L
Sbjct: 71 ----------EDLTLCDIGAGAGFPSLPLKIAFPQLKVTIVDSLNKRIAFLEDLVAKLGL 120
Query: 171 LNVQIVRGRAETLGKDVS-FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
V ++ RAET S +RE++D+ ARAVA + +L+E CLP +VGG F+A K
Sbjct: 121 TGVTLIHDRAETFSAKTSPYREKFDIVTARAVARLSVLSELCLPAAKVGGEFIAYKASAA 180
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE++ A++ +G + + ++ +R +V K + TPKKYPR PG P+K P+
Sbjct: 181 PEELQQGGTAIKQLGGKVQKTVTLTLPGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
>gi|422879418|ref|ZP_16925884.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
gi|422929264|ref|ZP_16962206.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
29667]
gi|422932235|ref|ZP_16965166.1| glucose inhibited division protein B [Streptococcus sanguinis
SK340]
gi|332366130|gb|EGJ43886.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
gi|339615080|gb|EGQ19763.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
29667]
gi|339619019|gb|EGQ23609.1| glucose inhibited division protein B [Streptococcus sanguinis
SK340]
Length = 237
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIG----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I CP VT+++S+NKR FL+ +L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDRAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITMVEKKKETPNKYPRKAGMPNKRPL 237
>gi|78044839|ref|YP_358880.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577253|sp|Q3AG54.1|RSMG_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77996954|gb|ABB15853.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
Length = 235
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 14/230 (6%)
Query: 63 QQEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
++E+I L Y L+ N K NLTAV +EV+ +H DS A++ Y D
Sbjct: 17 EKEKIQLFERYYRLLISENEKYNLTAVTGEDEVIVKHFLDSTAVL-----IYRDLTD--- 68
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
L VD+GTGAG PG+ L I P K+ LL+S+ KRC+FLE V L NV ++ R
Sbjct: 69 ---LNAVDIGTGAGFPGIPLKIMVPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINER 125
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE LG+ FRE +DV +RAVAE+R+L E+ PL+R+GG + KG EE+K +E+A
Sbjct: 126 AENLGRQKPFRELFDVTFSRAVAEVRVLLEFHAPLLRLGGETILFKGPGVDEELKKAEKA 185
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +G L + FG+R+ VV K + TP+ YPR PG P K PL
Sbjct: 186 AKQLGMELKDVYYYRLPGNFGERSLVVYKKLQNTPENYPRRPGIPEKRPL 235
>gi|419779824|ref|ZP_14305682.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK100]
gi|383185894|gb|EIC78382.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK100]
Length = 237
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLEGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVKKKKETPNKYPRKAGMPNKRPL 237
>gi|335356781|ref|ZP_08548651.1| 16S rRNA methyltransferase GidB [Lactobacillus animalis KCTC 3501]
Length = 247
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 122/232 (52%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y + L+ N +NLTA+ EV +H DSL +K+ T
Sbjct: 17 LSDEQMQQFQTYYEFLVATNEHVNLTAITKQEEVYLKHFYDSLLPALEVKDIQTR----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L + DVG GAG P + L IA P+ KVT+++S+NKR FLE L +
Sbjct: 72 ---ALSICDVGAGAGFPSIPLKIAFPNLKVTIVDSLNKRIKFLEELSQKLNLTDTHFYHA 128
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK FRE +DV ARAVA + +L+E+CLPL ++ G F+A K EE+ +++
Sbjct: 129 RAEEFAGKKSEFRESFDVVTARAVARLSVLSEFCLPLAKLNGRFIALKAQKANEELADAK 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV +G + + R +V K + TP KYPR PGTPAK PL
Sbjct: 189 YAVATLGGKIEEDIQTALPKSDETRHIIVISKKKPTPNKYPRKPGTPAKQPL 240
>gi|331002967|ref|ZP_08326479.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413011|gb|EGG92386.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
Length = 241
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 134/227 (59%), Gaps = 9/227 (3%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
++E+++ + + L++ N+ MNLT++ ++ E +H DS+++I +K+ DS +
Sbjct: 23 KKEKLYRFYELLIEKNKVMNLTSITELKECTYKHFIDSISLIKIVKD-----LDSK---D 74
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
+ D+GTGAG PG+ LAI P+ +TL++S+NKR F++ L NV + RAE
Sbjct: 75 YNIADLGTGAGFPGIPLAIVFPNLNLTLIDSLNKRIKFIQEVCENLGLENVNAIHSRAED 134
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
+ ++ +RE +D+ V+RAVA + L+EYCLPLV++GG F++ K EV ++ A++L
Sbjct: 135 IARNRDYRESFDICVSRAVANLASLSEYCLPLVKLGGSFISYKSKGYDIEVNEAKNAIKL 194
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G + E +G+R + K + T KYPR G P K PL
Sbjct: 195 LGGEIKDSIKFE-LGEYGERILLDIKKIKSTSNKYPRKAGLPTKEPL 240
>gi|225181153|ref|ZP_03734599.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
gi|225168122|gb|EEG76927.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
Length = 235
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 13/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL ++ +Y L++ NR++NLT + + EVM +H DSL ++ S
Sbjct: 15 TLPPEAPDRFEMYYRQLVEANRQVNLTRITEPAEVMIKHFLDSLEVL------------S 62
Query: 118 SCNS-NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+C L+DVGTGAGLPG+ L IACP +TLL+S KR FL+ VS +L NV ++
Sbjct: 63 ACREFKGPLLDVGTGAGLPGIPLKIACPQISLTLLDSSKKRVSFLKDLVSALELENVTVI 122
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE + +REQ+ V+RAVA + +LAE CLP V G FVA KG + E++ +
Sbjct: 123 HGRAEDYARQDDYREQFPFVVSRAVARLNVLAELCLPFVSQNGYFVAYKGPEGATELQEA 182
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G + + + G+R+ + K TP KYPR G P K PL
Sbjct: 183 QNALSQLGGAPGKEWRYQLPENMGERSLLFLRKLETTPAKYPRKAGLPEKRPL 235
>gi|406587253|ref|ZP_11062156.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD1S]
gi|414158236|ref|ZP_11414530.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0441]
gi|419817579|ref|ZP_14341734.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD4S]
gi|404465750|gb|EKA11148.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD4S]
gi|404473258|gb|EKA17606.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD1S]
gi|410870781|gb|EKS18738.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0441]
Length = 237
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAENFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|322374558|ref|ZP_08049072.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
gi|321280058|gb|EFX57097.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
Length = 237
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAQN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|389818760|ref|ZP_10208935.1| methyltransferase gidB [Planococcus antarcticus DSM 14505]
gi|388463670|gb|EIM06017.1| methyltransferase gidB [Planococcus antarcticus DSM 14505]
Length = 237
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 128/231 (55%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q +Y + L++WN KMNLTA+ + V +H DS+ T+
Sbjct: 17 LTEEQLKQFRIYYEELVEWNEKMNLTAITEQPAVYLKHFYDSI----------TAAFYLD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++KL DVG GAG P + L I P +VT+++S+NKR FLEH S L VQ V
Sbjct: 67 FTKSMKLCDVGAGAGFPSIPLKICFPHIEVTIVDSLNKRIQFLEHLSSKLGLTKVQFVHS 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+ + RE YD+ ARAVA + +LAE C+PLV+ GG+F A K +E+ ++E+
Sbjct: 127 RAEDFGQSLH-RESYDLVTARAVARLSVLAELCVPLVKKGGVFAAMKAASAADELDDAEK 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L + S +R V K ++TPKKYPR G P K P+
Sbjct: 186 ALLKLGVKLDAIHSFLLPIEESERYIQVFKKFKQTPKKYPRKAGVPNKSPI 236
>gi|315612910|ref|ZP_07887821.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
gi|315315020|gb|EFU63061.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
Length = 245
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 77 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 136 RAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 195
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 196 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|319946423|ref|ZP_08020660.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|417919952|ref|ZP_12563473.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
australis ATCC 700641]
gi|319747391|gb|EFV99647.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|342831508|gb|EGU65824.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
australis ATCC 700641]
Length = 237
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN K+NLTA+ + +EV +H DS+A PI
Sbjct: 17 LTNRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIA---PILQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ VT+++S+NKR FL L V G
Sbjct: 69 -NKPIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELGLSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKVFRAQFDLVTARAVARMQVLSELTIPFLKVGGRLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + +++ + P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVED--NLQYELPNGDPRYVTVVEKKKETPNKYPRKAGLPNKRPL 237
>gi|170760430|ref|YP_001788983.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
gi|193806441|sp|B1KUB0.1|RSMG_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169407419|gb|ACA55830.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
Length = 239
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 133/231 (57%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N ++ Q Y + + +WN+K+NLTA+ + E++++H D + I S
Sbjct: 18 FNDKKYNQFISYKNLIQEWNKKVNLTAIVEDEEIIKKHFIDCIKIFKA----------SP 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+GTGAG PG+ + I D K+TLL+S+ KR FL + +L ++Q + G
Sbjct: 68 IGEAKSLIDIGTGAGFPGIPIKILREDIKITLLDSLQKRINFLNIVIGDLKLKDIQCLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ R++YDVAV+RAVA + +L+E+C+P V+ GG F+A KG +EE+ + +
Sbjct: 128 RAEDYAQEAEHRQKYDVAVSRAVANLAVLSEFCIPFVKKGGYFIAMKGPSVEEEITVATK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++G + + ++ + + V+ K + T KKYPR PG K PL
Sbjct: 188 SIEVLGGKIEDIIKIDIEDTDLKHNLVIIKKVKETEKKYPRKPGIIKKDPL 238
>gi|342163935|ref|YP_004768574.1| 16S rRNA methyltransferase GidB [Streptococcus pseudopneumoniae
IS7493]
gi|341933817|gb|AEL10714.1| 16S rRNA methyltransferase GidB [Streptococcus pseudopneumoniae
IS7493]
Length = 237
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L +V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDDVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDLAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVED--NLNYALPNGNPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|401684649|ref|ZP_10816525.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. BS35b]
gi|406576959|ref|ZP_11052581.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD6S]
gi|418974756|ref|ZP_13522665.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK1074]
gi|383348127|gb|EID26086.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK1074]
gi|400184919|gb|EJO19155.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. BS35b]
gi|404460527|gb|EKA06785.1| 16S rRNA methyltransferase GidB [Streptococcus sp. GMD6S]
Length = 237
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|365925849|ref|ZP_09448612.1| 16S rRNA methyltransferase GidB [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 242
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 124/232 (53%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q EQ Y L+ +N NLTA+ + EV +H DS I+ + S
Sbjct: 17 LDAHQMEQYEDYFQLLVDFNAHTNLTAITEKKEVYLKHFFDS--ILTGVAVSQLQ----- 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L L DVG GAG P + L IA PD KVT+++S+NKR +FL+ + L V
Sbjct: 70 -NKPLTLCDVGAGAGFPSIPLKIAFPDLKVTIVDSLNKRILFLDQLANNLGLTGVSFYHA 128
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE GK +RE +D+ ARAVA + +LAE CLPLV+VGG FVA K E+ ++
Sbjct: 129 RAEEFAGKKSQYRESFDIVTARAVARLNVLAELCLPLVKVGGSFVALKAQKAHAELDEAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G +Q + +R + K ++TP KYPR GTP K PL
Sbjct: 189 FAIKTLGGEFVQDNKLVLPITSDERHIIKIDKVKKTPAKYPRKAGTPGKQPL 240
>gi|307709239|ref|ZP_07645697.1| methyltransferase GidB [Streptococcus mitis SK564]
gi|307619822|gb|EFN98940.1| methyltransferase GidB [Streptococcus mitis SK564]
Length = 237
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ +Q++Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 11 AEHNLPLSDQQKKQFERYFELLVEWNGKINLTAITDKEEVYLKHFYDSIA---PILQGLI 67
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L
Sbjct: 68 S------NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V GRAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE
Sbjct: 122 VHFYHGRAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++ A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 182 LFEAKNALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|418017155|ref|ZP_12656714.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius M18]
gi|345527848|gb|EGX31156.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius M18]
Length = 237
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDQFQRYFELLVEWNEKINLTAIIERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CP+ VT+++S+NKR FL +L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ +++
Sbjct: 128 RAEDFGQDKGFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--PILNENYKLPNGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|116493452|ref|YP_805187.1| cell division SAM-dependent methyltransferase [Pediococcus
pentosaceus ATCC 25745]
gi|122265084|sp|Q03DH7.1|RSMG_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103602|gb|ABJ68745.1| 16S rRNA m(7)G-527 methyltransferase [Pediococcus pentosaceus ATCC
25745]
Length = 243
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ Q Q Y L++ N +NLTA+ + NEV +H DS + P ++
Sbjct: 17 ISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDS--VTPLLE------APEY 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S +L DVG GAG P L + I P KVT+++S+NKR FL+ V +L +V +V
Sbjct: 69 FKSGAELCDVGAGAGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHD 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G K +RE++++ ARAVA + +L+E C+PLV+ G F+A K + ++E+ + +
Sbjct: 129 RAETFGAKKSVYREKFEIVTARAVARLSVLSELCIPLVKQNGFFIALKAANTEQELSDGK 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L+ + +R VV K ++TP KYPR PGTP K P+
Sbjct: 189 MAIAILGGKLIVDKDFALPATGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI 240
>gi|387762002|ref|YP_006068979.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius 57.I]
gi|339292769|gb|AEJ54116.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius 57.I]
Length = 237
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++ Y + L++WN K+NLTA+ + +EV +H DSLA P+ +
Sbjct: 17 LSQKQKDHFQRYFELLIEWNEKINLTAITERDEVYLKHFYDSLA---PVLQGHIK----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I CP+ VT+++S+NKR FL +L V G
Sbjct: 69 -NQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELELSGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K EE+ +++
Sbjct: 128 RAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKAAAADEELADAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A + + + P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFAK--PILNENYKLPNGDGRNITIVDKKKETPNKYPRRAGMPNKKPL 237
>gi|417924478|ref|ZP_12567918.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK569]
gi|342835888|gb|EGU70117.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK569]
Length = 237
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 126/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y L++WN K+NLTA+ D +EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFKLLVEWNEKINLTAITDKDEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|385262188|ref|ZP_10040303.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK643]
gi|385191929|gb|EIF39341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK643]
Length = 237
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSEQQKHQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|322390107|ref|ZP_08063642.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
gi|321143234|gb|EFX38677.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
Length = 237
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 130/229 (56%), Gaps = 12/229 (5%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
RQ+EQ Y + L++WN K+NLTA+ + +EV +H DS+A PI N
Sbjct: 20 RQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIA---PILQGLIE------NQ 70
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
++L+D+G GAG P L + I P+ VT+++S+NKR FL L V GRAE
Sbjct: 71 PIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
+D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++ A+
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKNALN 190
Query: 242 LMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ + + +++ + P G R V K + TP KYPR G P K PL
Sbjct: 191 LLFSKVED--NLQYELPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|418657896|ref|ZP_13219648.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-111]
gi|375039840|gb|EHS32756.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Staphylococcus
aureus subsp. aureus IS-111]
Length = 241
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 11/224 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q++Q Y L++WN KMNLT++ D ++V +H DS+A P +
Sbjct: 17 LTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIA--PSFYFDF------- 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + DVG GAG P + L I P KVT+++S+NKR FL H S QL +V +
Sbjct: 68 -NQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET GK V +RE YDV ARAVA + +L+E CLPLV+ GG FVA K +EE++ ++
Sbjct: 127 RAETFGKGV-YRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKF 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 282
A+ ++G ++ + + E G+R + K R K + G
Sbjct: 186 AISVLGGNVTETHTFELPEDAGERQMFIIDKKDRRRKSIQENQG 229
>gi|224541704|ref|ZP_03682243.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
gi|224525373|gb|EEF94478.1| 16S rRNA methyltransferase GidB [Catenibacterium mitsuokai DSM
15897]
Length = 234
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ Y + L++WN KMNLTA+ D V +H DSL I S + CD
Sbjct: 17 LSEKQIEQFEKYYEILVEWNEKMNLTAITDREGVYLKHFYDSLTIAFDFPFSNQTICD-- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
VG GAG P + L I P+ VT+++S+NKR FL H +L ++Q V
Sbjct: 75 ---------VGAGAGFPSVPLKIVYPELNVTIVDSLNKRITFLNHLFKELELDHIQAVAS 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE KD RE +D+ +ARAVA + IL E CLPLV+ G F++ KG EE+K+++
Sbjct: 126 RAEDFCKD--HRESFDIVMARAVARLNILDELCLPLVKKDGYFLSLKGLKAPEELKDAKG 183
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++++G ++ + R +V K + TP KYPR+ G K PL
Sbjct: 184 GIKVLGGEVMDDFTFTLSDQNDHRHNIVIKKVKSTPAKYPRNYGQIKKKPL 234
>gi|307706750|ref|ZP_07643555.1| methyltransferase GidB [Streptococcus mitis SK321]
gi|307617835|gb|EFN96997.1| methyltransferase GidB [Streptococcus mitis SK321]
Length = 237
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L +V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDSVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L +D +FR YD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDLAQDKNFRAHYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|116512182|ref|YP_809398.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
SK11]
gi|123125536|sp|Q02YJ6.1|RSMG_LACLS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116107836|gb|ABJ72976.1| 16S rRNA m(7)G-527 methyltransferase [Lactococcus lactis subsp.
cremoris SK11]
Length = 238
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 135/232 (58%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y + L++WN K+NLTA+ + NEV +H DS+A PI Y D
Sbjct: 17 LSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVA---PI--LYGLITDQP 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++D+G GAG P L + I P+ +VT+++S+NKR FL L NV ++ G
Sbjct: 72 VS----ILDIGAGAGFPSLPMKIIFPELEVTIIDSLNKRINFLSLLTEELGLENVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D ++R +D ARAVA + +L+E+ + ++ G ++ K +EE+ ++++
Sbjct: 128 RAEDFGQDSNYRATFDFVTARAVARLSVLSEFTISFLKKNGNLLSLKAAQFEEELTDAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G ++ + E P G +R V K + TPKKYPR GTPAK P+
Sbjct: 188 AIAILGGKFIKEIAYE--LPNGDERHIAVIEKKKETPKKYPRKAGTPAKSPI 237
>gi|429205068|ref|ZP_19196348.1| 16S rRNA methyltransferase GidB [Lactobacillus saerimneri 30a]
gi|428146677|gb|EKW98913.1| 16S rRNA methyltransferase GidB [Lactobacillus saerimneri 30a]
Length = 246
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHC 115
L +Q Q LY L++ N ++NLTA+ NEV +H DSL +P I+
Sbjct: 17 LTEQQMAQFALYYRLLVKTNEQVNLTAITAENEVYLKHFYDSLTAAIAVPEIRTQ----- 71
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
L L DVG GAG P + L IA P +VT+++S+NKR FL+ V L +V +
Sbjct: 72 ------ALSLADVGAGAGFPSIPLKIAFPQLRVTIIDSLNKRINFLQTLVDELGLTDVTL 125
Query: 176 VRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V RAE G K + RE +D+ ARAVA M +L+E+CLPLVRVGG FVA K +E+
Sbjct: 126 VHARAEEFGGKKSASRETFDLVTARAVARMSVLSEFCLPLVRVGGQFVALKAQKAPDELH 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++ A+ +G + + +R V+ K + TP++YPR GTPA+ PL
Sbjct: 186 DAQYAIAKLGGKIEADKQMTLPQTGDERHIVIVSKVQPTPRQYPRKAGTPARKPL 240
>gi|417003099|ref|ZP_11942185.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325478845|gb|EGC81955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 212
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 128/221 (57%), Gaps = 17/221 (7%)
Query: 69 LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 128
+Y+D LL+ N NLTA+ D +E+ +H DSL I+ Y D K++D+
Sbjct: 9 IYMDYLLEVNSHTNLTAIIDPSEIEIKHFKDSLTIL-----DYIKEGD-------KVLDI 56
Query: 129 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 188
G GAG PG+ L I + +TL++S+NK+ F+ + L N + + RAE KD
Sbjct: 57 GAGAGFPGIPLRIE-KEIDLTLIDSVNKKVKFMNEVIEKLNLENARAIHVRAEDFAKDQ- 114
Query: 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248
RE+YDV V+RAVA MR L+EYCLP ++VGGLFVA KG EE+++++ A+ ++G ++
Sbjct: 115 -REKYDVVVSRAVANMRTLSEYCLPFLKVGGLFVALKGPKAMEELEDAQNAIDILGGQVI 173
Query: 249 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ S++ R +V K ++T KYPR P K PL
Sbjct: 174 KTESIDLSG--NDRVNIVVQKIKKTKNKYPRGKNLPKKSPL 212
>gi|251800243|ref|YP_003014974.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
gi|247547869|gb|ACT04888.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
Length = 240
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 127/237 (53%), Gaps = 22/237 (9%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ Y L++WN KMNLT + + + V E+H DS+++ S
Sbjct: 19 LSPKQLEQFDSYHRLLVEWNEKMNLTGITERDAVFEKHFYDSISL--------------S 64
Query: 119 CNSNLK----LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
N+K + D+G+GAG P + L I P KV +++S+NKR FL H V L NV
Sbjct: 65 FFVNMKEVGSIADIGSGAGFPSIPLKICYPHLKVVIVDSLNKRIQFLNHLVQELGLENVN 124
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V GRAE + + ++R+ +D+ ARAVA + +L E+CLP R G F A KG EEVK
Sbjct: 125 CVHGRAEDIARMPAYRDSFDLVTARAVARLNVLNEFCLPFTRKNGTFAAMKGSQSVEEVK 184
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E AV L + PF Q R V+ K+ TPKKYPR GTP K+PL
Sbjct: 185 --EAAVSLRELKAKVRAEHAFKLPFEQSERYIVLINKTDATPKKYPRKAGTPLKLPL 239
>gi|419800328|ref|ZP_14325614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis F0449]
gi|385695488|gb|EIG26048.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
parasanguinis F0449]
Length = 237
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN K+NLTA+ +EV +H DS+A PI
Sbjct: 17 LTDRQKEQYERYFELLVEWNEKINLTAITAKDEVYLKHFYDSIA---PILQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ VT+++S+NKR FL L V G
Sbjct: 69 -NQPIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELGLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + +++ + P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEN--NLQYELPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|366086631|ref|ZP_09453116.1| 16S rRNA methyltransferase GidB [Lactobacillus zeae KCTC 3804]
Length = 243
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 129/241 (53%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L+ QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLDDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGMVLPDLQR 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QPLSLCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTTRLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K + R Q+D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSAHRGQFDLVTARAVAALNVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE+ ++ A+ L+G L+Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TAEELIAAKPAIGLLGGKLVQDAALTLPETGDPRHLLVIEKVKATPNKYPRKPGVPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|319936584|ref|ZP_08010998.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
gi|319808382|gb|EFW04942.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
Length = 234
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 130/247 (52%), Gaps = 15/247 (6%)
Query: 45 LTTTRIVNSSHFE--TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA 102
+ + +N+ H + +L+ Q +Q +Y + L++WN KMNLTA+ +V +H DSL
Sbjct: 1 MNIEQFINALHDKGISLSDYQLKQFEIYYNTLVEWNEKMNLTAITQKEDVYLKHFYDSLT 60
Query: 103 IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLE 162
I D N N L D+G GAG P + L I PD K+T+++S+ KR FL
Sbjct: 61 I----------SFDFDFN-NQTLCDIGAGAGFPSIPLKIVYPDLKITIVDSLTKRITFLN 109
Query: 163 HAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFV 222
+ + +L NV V RAE + RE +D+ ARAVA + IL E CLPLVR+GG F+
Sbjct: 110 YLTQVLKLNNVTAVSARAEDYA--IGHRETFDIVTARAVARLNILDELCLPLVRIGGHFI 167
Query: 223 AAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 282
KG +EE+ ++ + +G +++ + R + K + TP+KYPR G
Sbjct: 168 TLKGLKAKEELNEAKHGIDKLGGKVMKETHFTLTNENDHRCNIFIHKIKETPQKYPRPFG 227
Query: 283 TPAKVPL 289
K PL
Sbjct: 228 KIKKKPL 234
>gi|309777476|ref|ZP_07672430.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
gi|308914716|gb|EFP60502.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
Length = 236
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 133/239 (55%), Gaps = 15/239 (6%)
Query: 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 110
V + H L+ RQ +Q Y L++WN+KMNLTA+ D++E+ E+H DS I+P S
Sbjct: 13 VLAEHGIQLHERQLQQFEEYASMLIEWNQKMNLTAITDLDEIYEKHFLDS--ILP----S 66
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
+ S DVG GAG PG+ L I PD ++T++E++ KR FL +L
Sbjct: 67 FDWKLQGS------FCDVGAGAGFPGIPLKIIYPDLELTIVETLGKRITFLNALCEKLKL 120
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V V RAE K+ RE +D+ ARAVA + +L+E C+PLV+ G F+A KG +
Sbjct: 121 DGVACVHARAEDYAKE--HRESFDIVSARAVANLPLLSELCIPLVKQHGSFLALKGANGD 178
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE +E+A++L+G L Q V + S QR V K+R TPKKYPR K PL
Sbjct: 179 EEYALAEKAIRLLGCELKQR-DVHTLSDGSQRINFVFEKTRLTPKKYPRPFAQMKKNPL 236
>gi|297724643|ref|NP_001174685.1| Os06g0239000 [Oryza sativa Japonica Group]
gi|255676877|dbj|BAH93413.1| Os06g0239000, partial [Oryza sativa Japonica Group]
Length = 110
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 90/110 (81%)
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
+ +G+ FRE +DVAVARAVAE+++LAEYCLPLVR+ GLF+AAKGH+P EE+KN++ A
Sbjct: 1 GQNVGQSPDFREAFDVAVARAVAELKVLAEYCLPLVRIDGLFIAAKGHNPHEEIKNAKSA 60
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
V +GAS+L++C VES P GQRTAVV +K TPKKYPR PGTP+K+PL
Sbjct: 61 VHKLGASMLEICDVESMGPHGQRTAVVYIKECITPKKYPRHPGTPSKMPL 110
>gi|157151065|ref|YP_001449807.1| 16S rRNA methyltransferase GidB [Streptococcus gordonii str.
Challis substr. CH1]
gi|189040724|sp|A8AVJ7.1|RSMG_STRGC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157075859|gb|ABV10542.1| methyltransferase GidB [Streptococcus gordonii str. Challis substr.
CH1]
Length = 237
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+ + D
Sbjct: 17 LTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLIDNQDH- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 73 -----KLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|306829253|ref|ZP_07462443.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
gi|304428339|gb|EFM31429.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
Length = 245
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 77 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELNLDGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 136 RAEDFAQDKNFRAQFDMVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 195
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 196 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|417940734|ref|ZP_12584022.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK313]
gi|419783190|ref|ZP_14308981.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK610]
gi|343389615|gb|EGV02200.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK313]
gi|383182344|gb|EIC74899.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
oralis SK610]
Length = 237
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN ++NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNERINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLNVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|423078176|ref|ZP_17066862.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus ATCC
21052]
gi|357552104|gb|EHJ33881.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus ATCC
21052]
Length = 243
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 128/241 (53%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P +++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQS 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S C+ VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QPLSLCN-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R QYD+ ARAVA + +LAE CLPL + G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQHGQFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE+ ++ A+ L+G L+Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPEELIAAKPAINLLGGKLVQDAALTLPETGDTRHLLVIEKVKPTPNKYPRKPGMPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|373453869|ref|ZP_09545755.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. 3_1_31]
gi|371962861|gb|EHO80437.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacterium
sp. 3_1_31]
Length = 236
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 136/246 (55%), Gaps = 29/246 (11%)
Query: 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 110
V S+ TL Q +Q +Y LL+WN+KMNLTA+ D++E+ E+H DS I+P
Sbjct: 13 VVKSYGITLQDTQLQQFAMYAAMLLEWNQKMNLTAITDMDEIYEKHFLDS--ILP----- 65
Query: 111 YTSHCDSSCNSNLK--LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT 168
S + LK DVG GAG P + L I PD ++T++E++ KR FLE
Sbjct: 66 -------SFDVKLKGTFCDVGAGAGFPSIPLKIVYPDLEITIVETLGKRITFLEALCHQL 118
Query: 169 QLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
+L NV V RAE K+ RE +D+ ARAVA + +L+E C+PLV+VGG+F+A KG +
Sbjct: 119 KLNNVHCVHARAEDYAKE--HRESFDIVSARAVANLTMLSELCIPLVKVGGMFLALKGAN 176
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQ-----SPFGQRTAVVCLKSRRTPKKYPRDPGT 283
EE +E+A++L+G C + + S +R V K ++TP KYPR
Sbjct: 177 ALEEYALAEKAIRLLG------CEEKRRDEKVLSDGSKRVNFVFEKVKKTPLKYPRAFAQ 230
Query: 284 PAKVPL 289
K PL
Sbjct: 231 IKKNPL 236
>gi|420144487|ref|ZP_14651975.1| Ribosomal RNA small subunit methyltransferase G (16S rRNA
7-methylguanosine methyltransferase) [Lactococcus
garvieae IPLA 31405]
gi|391855939|gb|EIT66488.1| Ribosomal RNA small subunit methyltransferase G (16S rRNA
7-methylguanosine methyltransferase) [Lactococcus
garvieae IPLA 31405]
Length = 237
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 133/232 (57%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LSEQQKLQFERYFELLVEWNEKINLTAITEKKEVFLKHFYDSIA---PILYKLIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LK++D+G GAG P L + I P+ +VT+++S+NKR FL L V ++ G
Sbjct: 69 -NEPLKILDIGAGAGFPSLPMKIIFPELQVTIIDSLNKRINFLSLLSKELHLEQVTLLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G++ +R Q+D+ ARAVA + +L+E +P ++ G ++ K EE+ +++
Sbjct: 128 RAEDFGQNPLYRAQFDIVTARAVARLSVLSELTIPFLKKNGRLLSLKAAKFDEELSDAKH 187
Query: 239 AVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G+ ++ ++ Q P G +R + K + TPKKYPR GTP K PL
Sbjct: 188 AIAVLGSKFIE--QIDYQLPNGDERHIALIEKKKETPKKYPRKAGTPNKKPL 237
>gi|417935330|ref|ZP_12578649.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis bv. 2 str. F0392]
gi|340769823|gb|EGR92341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis bv. 2 str. F0392]
Length = 237
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDMVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|307708827|ref|ZP_07645289.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
gi|307615193|gb|EFN94404.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
Length = 237
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D +EV +H DS+A PI
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVGDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|381184086|ref|ZP_09892754.1| 16S rRNA methyltransferase GidB [Listeriaceae bacterium TTU M1-001]
gi|380316024|gb|EIA19475.1| 16S rRNA methyltransferase GidB [Listeriaceae bacterium TTU M1-001]
Length = 238
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q Y L++WN KMNLTA+ D +V +H DS++ + + +S
Sbjct: 17 LDETQMNQFDDYYKTLVEWNEKMNLTAITDKQDVYLKHFYDSISAAFFVD---FTKIESI 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
C D+G GAG P + + I P +V++++S+ KR FL H + L V
Sbjct: 74 C-------DIGAGAGFPSIPIKICFPHLEVSIVDSLAKRITFLNHLAEILHLDKVHFYHD 126
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAET G++ R Q+D+ ARAVA M +L+E C+PLV+ GG+F+A K ++E++ + +
Sbjct: 127 RAETFGQNKLHRAQFDLVTARAVARMSVLSELCIPLVKKGGIFLAMKAQQAEQELEVAAK 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L G + + +R V K++ TP KYPR GTP K P+
Sbjct: 187 AITLFGGKVTNHFAFMLPVEESERNIYVIEKTKETPNKYPRKAGTPNKQPI 237
>gi|363891493|ref|ZP_09318672.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium CM2]
gi|361965550|gb|EHL18532.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium CM2]
Length = 237
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 134/242 (55%), Gaps = 18/242 (7%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
I+N SH N E+ +Y D +L++N+ +NLTA+ D ++ +H DS++I+
Sbjct: 12 IMNISH----NDDIYEKFEIYTDYMLEYNKNINLTAITDKQDIYIKHYLDSISIL----- 62
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ D NS K +D+GTGAG P + + + D +TL++S+NKR +FL++ +
Sbjct: 63 ---GYFDIQPNS--KSIDIGTGAGFPSIPVKLLREDIDMTLVDSLNKRIIFLQNLIEKLN 117
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L N+ + RAE L FR+ YD+ ++RAVA M LAEYC P ++ GG + KG +
Sbjct: 118 LKNITPIHSRAEELAHKKEFRQSYDICMSRAVANMSTLAEYCTPFLKKGGHLLCLKGQNV 177
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKV 287
+E+KN + A++ + ++ E Q PF VV K TP YPR GTP+K
Sbjct: 178 DDELKNCQNAMKKLKCKIID--KKEVQLPFSDLHHNIVVVEKLGDTPDIYPRKSGTPSKN 235
Query: 288 PL 289
PL
Sbjct: 236 PL 237
>gi|223983436|ref|ZP_03633622.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
gi|223964608|gb|EEF68934.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
Length = 233
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 124/230 (53%), Gaps = 14/230 (6%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
+ RQQEQ Y L +WN KMNLTA+ + EV+E+H DSL + + CD
Sbjct: 18 SARQQEQFVRYAQLLQEWNEKMNLTAITEWEEVLEKHFYDSLVPFAGMPLNTVHLCD--- 74
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
VG GAG P L L I P K+T+LE +NKR VFL+ QL NV+ + R
Sbjct: 75 --------VGAGAGFPSLPLKIMNPQLKITILEPLNKRVVFLKEVCRELQLDNVECLNVR 126
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE K+ RE +D+ ARAVA +R+LAE CLPLV+ G+FVA KG EE +E+A
Sbjct: 127 AEDYAKE--HRESFDLVTARAVANLRVLAELCLPLVKKNGMFVAMKGAAGFEEQIQAEKA 184
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++GA L + V Q R + K R TP +YPR K PL
Sbjct: 185 TKILGAELERAEEVHLQDG-SARVNLTYRKVRSTPPQYPRAYAKIKKNPL 233
>gi|421894884|ref|ZP_16325367.1| 16S rRNA methyltransferase GidB [Pediococcus pentosaceus IE-3]
gi|385272180|emb|CCG90739.1| 16S rRNA methyltransferase GidB [Pediococcus pentosaceus IE-3]
Length = 243
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ Q Q Y L++ N +NLTA+ + NEV +H DS+ + + S +
Sbjct: 17 ISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAE-- 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L DVG GAG P L + I P KVT+++S+NKR FL+ V +L +V +V
Sbjct: 75 ------LCDVGAGAGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHD 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G K +RE++++ ARAVA + +L+E C+PLV+ G F+A K + ++E+ + +
Sbjct: 129 RAETFGAKKSVYREKFEIVTARAVARLSVLSELCIPLVKQNGFFIALKAANTEQELSDGK 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ ++G L+ +R VV K ++TP KYPR PGTP K P+
Sbjct: 189 MAIAILGGKLIVDKDFALPVTGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI 240
>gi|257067214|ref|YP_003153470.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
gi|256799094|gb|ACV29749.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
Length = 210
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 128/221 (57%), Gaps = 17/221 (7%)
Query: 69 LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 128
+Y+D LL+ N NLTA+ D +E+ +H DSL ++ IK +++D+
Sbjct: 7 IYMDYLLEVNSHTNLTAITDPSEIETKHFKDSLTVLDYIKEGD------------RVLDI 54
Query: 129 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 188
G GAG PG+ L I D +TL++S+NK+ F+ + L + + RAE K+
Sbjct: 55 GAGAGFPGIPLRIE-KDIDLTLIDSVNKKVKFMNEVIEKLGLTKARAIHTRAEDFAKEE- 112
Query: 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248
RE YDV V+RAVA M L+EYCLP+++VGG+F+A KG EE++N+++A+ ++G ++
Sbjct: 113 -RETYDVVVSRAVANMATLSEYCLPMLKVGGIFIALKGPRADEELENAQKAIDILGGRVI 171
Query: 249 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+L + +R +V K RRT KKYPR P K PL
Sbjct: 172 KLDRFDLDG--NERVNIVVEKIRRTKKKYPRGKNLPKKSPL 210
>gi|419766071|ref|ZP_14292288.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK579]
gi|383354449|gb|EID32012.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK579]
Length = 237
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELFEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|337282555|ref|YP_004622026.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 15912]
gi|335370148|gb|AEH56098.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 15912]
Length = 237
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN K+NLTA+ EV +H DS+A PI
Sbjct: 17 LTDRQKEQYERYFELLVEWNEKINLTAITAKEEVYLKHFYDSIA---PILQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ VT+++S+NKR FL L V G
Sbjct: 69 -NQPIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELGLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + +++ + P G R V K + TP KYPR G P K PL
Sbjct: 188 ALSLLFSKVED--NLQYELPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|374308951|ref|YP_005055382.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
gi|291165907|gb|EFE27954.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
Length = 237
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 133/233 (57%), Gaps = 17/233 (7%)
Query: 61 TRQQE-QIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCD 116
T QQE H+Y+ LL+ N+ MNLT + + NE+ +H DSL+ + P KNS
Sbjct: 18 TEQQEFDFHIYMQHLLEKNKVMNLTNITEENEIYTKHFLDSLSCLSVYPIPKNS------ 71
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
++D+GTGAG P + + I D K+TLL+S+NKR FL+ + ++ +
Sbjct: 72 -------TVIDIGTGAGFPSVPIKIMRRDLKMTLLDSLNKRINFLKEVGEVLHFEDMTYL 124
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
GRAE L + +R+ YD AV+RAVA + +L EY +P +++GG+F+ KG +E+ S
Sbjct: 125 HGRAEDLAQKAEYRQMYDFAVSRAVASLPVLLEYTIPFLKIGGIFICQKGPQAMQEIAQS 184
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A++L+GA + V+ + + + ++ K T KKYPR G P+K PL
Sbjct: 185 KSALKLLGAKVEDSIPVKIGTTDLEHSILIIKKIECTSKKYPRKAGKPSKEPL 237
>gi|341820472|emb|CCC56752.1| ribosomal RNA small subunit methyltransferase G [Weissella
thailandensis fsh4-2]
Length = 239
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 127/233 (54%), Gaps = 12/233 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q Q Y D L+ N MNLTA+ D +EV +H DSL + T
Sbjct: 17 LDDKQLTQYQTYYDRLVAVNEHMNLTAITDRDEVYLKHFYDSLTLAWAYPKLQTDQ---- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L ++DVG GAG P L L IA P ++T+++++NKR FL+ V+ L V ++
Sbjct: 73 ----LSMIDVGAGAGFPSLPLKIAFPQLQITIIDALNKRINFLQDLVNELGLEGVTVIHA 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G K REQ+DVA ARA+A + +L E LPLV+VGG +A KG EE+ ++
Sbjct: 129 RAEEFGHKKAPNREQFDVATARALARLNVLGELTLPLVKVGGALLAMKGSAASEELHEAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G + + V P G RT +V K TP +YPR PG PA+ PL
Sbjct: 189 GAITKLGGKIGEEVPV--NLPNGDPRTIIVIDKVSSTPNRYPRKPGDPARKPL 239
>gi|383762154|ref|YP_005441136.1| ribosomal RNA small subunit methyltransferase G [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381382422|dbj|BAL99238.1| ribosomal RNA small subunit methyltransferase G [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 258
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 120/225 (53%), Gaps = 3/225 (1%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E Y L+ WN ++NLTA+ V EV +H DSL +P + +
Sbjct: 36 EAFERYYQELVTWNERLNLTAIVGVEEVQTKHFLDSLVSLPLLAEELSVSLPLPSLRL-- 93
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
+DVGTGAG PG+ L +A P ++TL++ K+ FLEH V + L V +V GRAE LG
Sbjct: 94 -LDVGTGAGFPGVPLKLASPALQLTLMDGTQKKIAFLEHLVKVLGLEGVTLVHGRAEELG 152
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+ RE YD+ VARAVA + LAEY LPLVR GGL V KG +E + RA+ ++G
Sbjct: 153 RTSPHREHYDIVVARAVAPLNTLAEYLLPLVRKGGLAVFYKGPSAPQEFMQARRALNVLG 212
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++L VE +R ++ K TP YPR G K P+
Sbjct: 213 GEAVRLAPVEVPFLPERRFILLVKKIAATPSLYPRGQGLARKRPI 257
>gi|302672306|ref|YP_003832266.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
gi|302396779|gb|ADL35684.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
Length = 247
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 132/239 (55%), Gaps = 19/239 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ Y + L++WN MNLTA+ D ++V + H DS++ + Y D
Sbjct: 20 LSDKQLEQFDKYYELLIKWNEVMNLTAITDFDDVCKLHFVDSISAV-----QYFDFSDKE 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVS---LTQLLNVQI 175
+ L+D+GTGAG PG+ L I P+ +TL +S+NKR FL+ + L + ++
Sbjct: 75 YS----LIDIGTGAGFPGIPLKIVFPNLHITLFDSLNKRLKFLDEVIDTLGLNESGSIVT 130
Query: 176 VRGRAETLGKDVS---FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE S RE +D+ V+RAVA M L EYCLP V+VGG F+A K +E
Sbjct: 131 LHGRAEDYSSSKSKDSLRESFDLVVSRAVANMSTLCEYCLPYVKVGGNFIAYKSEKASDE 190
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTP--KKYPRDPGTPAKVPL 289
++ ++ A+ L+G L+ S E P +C+ ++ P KKYPR G P+K PL
Sbjct: 191 LQKAKGAIHLLGGKLIS--SDEFLLPNTDINRTICIVNKIEPTSKKYPRKAGVPSKEPL 247
>gi|380033751|ref|YP_004890742.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum WCFS1]
gi|38257501|sp|Q88T09.1|RSMG_LACPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|342242994|emb|CCC80228.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum WCFS1]
Length = 244
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q LY L+ N++ NLT + EV +H DSL +P +++
Sbjct: 11 AQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRD 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLG 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L V+ RAET GK + RE YD+A ARAVA + +L+E CLPLV++GG +A K +
Sbjct: 120 LTGVKTFHDRAETFAGKKSAHRESYDIATARAVARLSVLSELCLPLVKIGGQMIALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ASTETAEGTYAVQQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|331266663|ref|YP_004326293.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
gi|326683335|emb|CBZ00953.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
Length = 237
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN ++NLTA+ D EV +H DS+A PI S
Sbjct: 17 LSDQQKNQFERYFELLVEWNERINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+D+ ARAVA M+IL+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKKFRAQFDMVTARAVARMQILSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKHPL 237
>gi|300769525|ref|ZP_07079411.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300492940|gb|EFK28122.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 244
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q LY L+ N++ NLT + EV +H DSL +P +++
Sbjct: 11 AQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRD 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLA 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L VQ RAET GK + RE YD+ ARAVA + +L+E CLPLV+VGG +A K +
Sbjct: 120 LTGVQTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKVGGQMIALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G + Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGQIAQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|270293003|ref|ZP_06199214.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
gi|270278982|gb|EFA24828.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
Length = 245
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ D EV +H DS+A PI S
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIS----- 76
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 77 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 135
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR +D+ ARAVA M+IL+E +P ++VGG +A K + EE+ ++
Sbjct: 136 RAEDFAQDKNFRAHFDMVTARAVARMQILSELTIPYLKVGGKLLALKASNAPEELLEAKN 195
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 196 ALNLLFSKVEDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 245
>gi|357236167|ref|ZP_09123510.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
criceti HS-6]
gi|356884149|gb|EHI74349.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
criceti HS-6]
Length = 237
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 130/233 (55%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ +Q++Q Y L+ WN K+NLTA+ D +V +H DS+A P+
Sbjct: 16 TLSEQQKKQFEDYFKLLVTWNEKINLTAITDKEDVYLKHFYDSIA---PVLQGLIK---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
NS L+L+D+G GAG P L + I CP+ +VT+++S+NKR FL +L V
Sbjct: 69 --NSPLRLLDIGAGAGFPSLPIKILCPEIEVTIIDSLNKRINFLNEVAKGLELTGVHFCH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE G + FR +D+ ARAVA M++L+E +P +++GG +A K +E+ ++
Sbjct: 127 GRAEDFGHNKDFRASFDIVTARAVARMQVLSELTIPFLKIGGKLLALKAAAADQELVQAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ L+ A + + Q P G RT V K + TP KYPR G P K PL
Sbjct: 187 QALNLLFAKV--QSNNTYQLPNGDGRTLTVLEKKKETPNKYPRKAGLPNKKPL 237
>gi|419434385|ref|ZP_13974502.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40183]
gi|379575769|gb|EHZ40699.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA40183]
Length = 237
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 14/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLDQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S + ++ P R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEDNLSYALPNRDP---RYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|422871458|ref|ZP_16917951.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
gi|328945626|gb|EGG39777.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
Length = 237
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+ Q Y + L++WN K+NLTA+ + NEV +H DS+A P+
Sbjct: 17 LTDRQKNQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQGLID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLKLLAEELALDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKAFRTQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|363893850|ref|ZP_09320944.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium ACC19a]
gi|361963352|gb|EHL16430.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium ACC19a]
Length = 237
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 28/247 (11%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI-----I 104
I+N SH + + E+ +Y D +L++N+ +NLTA+ D ++ +H DS++I I
Sbjct: 12 IMNISHSDDI----YEKFEIYTDYMLEYNKNINLTAITDKQDIYIKHYLDSISILGYFDI 67
Query: 105 PPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHA 164
PP N K +D+GTGAG P + + + D +TL++S+NKR +FL++
Sbjct: 68 PP---------------NSKSIDIGTGAGFPSIPVKLLREDIDMTLVDSLNKRIIFLQNL 112
Query: 165 VSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224
+ L N+ + RAE L FR+ YD+ ++RAVA M LAEYC P ++ GG +
Sbjct: 113 IEKLNLKNIIPIHSRAEELAHKKEFRQSYDICMSRAVANMSTLAEYCTPFLKKGGHLLCL 172
Query: 225 KGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPG 282
KG + +E+KN + A++ + ++ E Q PF VV K TP YPR G
Sbjct: 173 KGQNVDDELKNCQNAMKKLKCKIVD--KKEVQLPFSDLHHNIVVVEKLDDTPDIYPRKSG 230
Query: 283 TPAKVPL 289
TP+K PL
Sbjct: 231 TPSKNPL 237
>gi|414156081|ref|ZP_11412390.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0442]
gi|410872290|gb|EKS20234.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
F0442]
Length = 237
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ+EQ Y + L++WN K+NLTA+ +++ +H DS+A PI
Sbjct: 17 LTDRQKEQYERYFELLVEWNEKINLTAITKKDDIYLKHFYDSIA---PILQGLIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ VT+++S+NKR FL L V G
Sbjct: 69 -NHPIRLLDIGAGAGFPSLPMKILFPELDVTIIDSLNKRINFLHLLAEELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D FR Q+DV ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQDKEFRAQFDVVTARAVARMQVLSELTIPYLKVGGRLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ + P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVED--NLHYELPNGDPRYITVVEKKKETPNKYPRKAGLPNKRPL 237
>gi|322376832|ref|ZP_08051325.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
gi|321282639|gb|EFX59646.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
Length = 237
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q++Q Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L +D +FR YD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDLAQDKNFRAHYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVKDNLSY--ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|386585565|ref|YP_006081967.1| methyltransferase GidB [Streptococcus suis D12]
gi|353737711|gb|AER18719.1| methyltransferase GidB [Streptococcus suis D12]
Length = 237
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+ Q H Y L++WN K+NLTA+ + +EV +H DS+A PI +
Sbjct: 17 LTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIA---PILQGHIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+L+D+G GAG P L + I P VT+++S+NKR FL +L V G
Sbjct: 69 -NEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLTEELELEGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P +++ G +A K ++E+ ++
Sbjct: 128 RAENFAQDKNFRAQFDLVTARAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A +++ + + P G RT + K + TP K+PR G P K PL
Sbjct: 188 ALNLLFAKVIE--NHDYTLPNGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|322387493|ref|ZP_08061103.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
gi|321142022|gb|EFX37517.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
Length = 245
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L +Q+ Q Y + L++WN K+NLTA+ + EV +H DS+A PI
Sbjct: 24 NLTDQQKAQFERYFELLVEWNEKINLTAITEKEEVYLKHFYDSIA---PILQGLIE---- 76
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V
Sbjct: 77 --NQEIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAEKLDLEGVHFYH 134
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 135 GRAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAK 194
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R + K + TP KYPR G P K PL
Sbjct: 195 NALNLLFSKVED--NISYTLPNGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 245
>gi|292669231|ref|ZP_06602657.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
gi|292649072|gb|EFF67044.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
Length = 240
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 123/232 (53%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q EQ +Y L+ WN +MNLTA+ +V +HI DSL +Y + +
Sbjct: 18 ALTAVQIEQCAVYNRLLIAWNERMNLTALTAPEDVAVKHIIDSL-------TAYDAKLFA 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+DVGTGAGLPG+ LA+ P +VTL++++ KR FL A + +L NV+ +
Sbjct: 71 PART---LIDVGTGAGLPGIPLAVYAPKIEVTLMDALGKRVKFLTEAAAAMELRNVRCIH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE + R +YD+AV+RAVA + +L EY LP VR GG +A KG E +
Sbjct: 128 ARAEEAARRPEHRARYDIAVSRAVARLPVLLEYTLPFVRTGGTLLALKGRAYAAEQAEGK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RA +++G + V R + K R TPK YPR G P + PL
Sbjct: 188 RAAEILGGGAISARPVRLPGLDDVRAILAVTKERPTPKGYPRRAGLPERAPL 239
>gi|317133702|ref|YP_004093016.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
gi|315471681|gb|ADU28285.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
Length = 237
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 125/234 (53%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHC 115
L Q Q++ Y L++WN K+NLTA+ D E+ +H DSL++ +PP +N+
Sbjct: 17 LTDGQLGQLNQYARLLVEWNEKINLTAITDRQEIAVKHFLDSLSLLHFVPPEQNAV---- 72
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
++DVG+GAG PG+VL IA PD ++T ++ KR FL + L V
Sbjct: 73 ---------VLDVGSGAGFPGMVLRIARPDLRLTCMDGTQKRIHFLSELAAALGLQEVVC 123
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ RAE G+D + RE +D ARAVA + LAEYCLP V+ GG FVA KG D E
Sbjct: 124 LHARAEEAGRDPALRETFDYVTARAVANLHALAEYCLPFVKPGGKFVAMKGPDGATEADK 183
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +A+Q +G + + + RT + K+ +TP YPR G K PL
Sbjct: 184 AAKAIQTLGGEIRGVHTFTLPGTDFSRTLIEVAKTGQTPAIYPRPGGKMKKKPL 237
>gi|419842698|ref|ZP_14366035.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis ATCC 700779]
gi|385703643|gb|EIG40756.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis ATCC 700779]
Length = 237
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L +Q+ Q Y + L++WN K+NLTA+ + EV +H DS+A PI
Sbjct: 16 NLTDQQKAQFERYFELLVEWNEKINLTAITEKEEVYLKHFYDSIA---PILQGLIE---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V
Sbjct: 69 --NQEIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAEKLDLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 127 GRAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R + K + TP KYPR G P K PL
Sbjct: 187 NALNLLFSKVED--NISYTLPNGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|309806385|ref|ZP_07700397.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
gi|308167216|gb|EFO69383.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
Length = 207
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 79 RKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDSSCNSNLKLVDVGTGAGLPGL 137
+K NLT + + +EV +H DSL P IK S+ +S C DVG GAG P +
Sbjct: 5 KKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAESLC-------DVGAGAGFPSV 55
Query: 138 VLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197
+ I PD K+T+++S+ KR FL+ V L N+ +V RAE G+++ RE +DV
Sbjct: 56 PIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVT 115
Query: 198 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 257
ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++ A+ ++G + + C
Sbjct: 116 ARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQNALTILGGQIEKTCEFTLPD 175
Query: 258 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RT V K ++ KYPR G P + PL
Sbjct: 176 SMDDRTLVAVKKIKKVSNKYPRQAGIPNRKPL 207
>gi|254557729|ref|YP_003064146.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum JDM1]
gi|254046656|gb|ACT63449.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
Length = 244
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q LY L+ N++ NLT + EV +H DSL +P +++
Sbjct: 11 AQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRD 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL V
Sbjct: 71 QQLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLG 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L V+ RAET GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K +
Sbjct: 120 LTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|418069983|ref|ZP_12707260.1| cell division SAM-dependent methyltransferase [Pediococcus
acidilactici MA18/5M]
gi|357536514|gb|EHJ20545.1| cell division SAM-dependent methyltransferase [Pediococcus
acidilactici MA18/5M]
Length = 243
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 9/233 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T++ Q Q Y L++ N +NLTA+ D EV +H DS+ + +T
Sbjct: 16 TVSDHQMRQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP---- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L DVG GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V
Sbjct: 72 ----GIALCDVGAGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVH 127
Query: 178 GRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G K ++R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+
Sbjct: 128 DRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELTTG 187
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G LL+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 188 RQAIAVLGGKLLEDRQFALPVTGDERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|399924550|ref|ZP_10781908.1| 16S rRNA methyltransferase GidB [Peptoniphilus rhinitidis 1-13]
Length = 231
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 13/239 (5%)
Query: 53 SSHFE--TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 110
+ +FE LN + Y D +L +N+ NLT + + ++ +H DSL +
Sbjct: 4 ADYFEEYKLNAENIYKFEKYKDLILVYNKHTNLTRITEDDDFNVKHFLDSLYLFK----- 58
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
T D K++D+GTGAG PG+ L + D +TLL+S+ KR FLE + L
Sbjct: 59 -TGLFDEKK----KVIDIGTGAGFPGVPLKLYNEDLDITLLDSLRKRIDFLEGVIEELGL 113
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
N++ + RAE + +D RE+YD+AV+RAVA + L EY + V+VGG F++ KG + +
Sbjct: 114 KNIKAIHARAEEIARDEKCREKYDIAVSRAVANLSTLTEYSMGFVKVGGYFISQKGPEYK 173
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE+K ++RA++LMG + ++ S +V K + T KKYPR G P K PL
Sbjct: 174 EELKKADRAIKLMGGEVEKVIHTPLPSDI-DHYIIVIKKIKSTDKKYPRGGGKPRKSPL 231
>gi|334882993|emb|CCB84098.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
pentosus MP-10]
Length = 244
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q Y L+ N++ NLT + EV +H DSL +P ++
Sbjct: 11 AQHGIALTAKQLAQFATYFKLLVATNQQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRE 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL+ V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLKDLVQQLD 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET GK RE YDV ARAVA + +L+E CLPLV+VGG VA K +
Sbjct: 120 LEDVQLFHDRAETFAGKKSVHRESYDVVTARAVARLSVLSELCLPLVKVGGQMVALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGKIVQDTAFTLPVTDDPRHIIVIDKRKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|422824124|ref|ZP_16872312.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|422856064|ref|ZP_16902722.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|422863146|ref|ZP_16909778.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|422866034|ref|ZP_16912659.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
gi|324993451|gb|EGC25371.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|327461725|gb|EGF08056.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|327473446|gb|EGF18866.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|327489010|gb|EGF20805.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
Length = 237
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L RQ++Q Y + L++WN K+NLTA+ + NEV +H DS+A P+ +
Sbjct: 17 LTDRQKDQFEHYFELLVEWNEKINLTAITEKNEVYLKHFYDSIA---PVLQALID----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N LKL+D+G GAG P L + I P VT+++S+NKR FL+ +L V G
Sbjct: 69 -NQELKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLKLLAEELELDKVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE ++ +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE++ ++
Sbjct: 128 RAEDFAQNKAFRAQFDLVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELEEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R V K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVQDNLSY--ALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL 237
>gi|339638384|emb|CCC17483.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
pentosus IG1]
Length = 244
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q Y L+ N++ NLT + EV +H DSL +P ++
Sbjct: 11 AQHGIALTAKQLAQFATYFKLLVATNQQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRE 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL+ V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLKDLVQQLD 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET GK RE YDV ARAVA + +L+E CLPLV+VGG VA K +
Sbjct: 120 LEDVQLFHDRAETFAGKKSVHRESYDVVTARAVARLSVLSELCLPLVKVGGQMVALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGKIVQDTAFALPVTDDPRHIIVIDKRKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|417091517|ref|ZP_11956394.1| methyltransferase GidB [Streptococcus suis R61]
gi|353533125|gb|EHC02792.1| methyltransferase GidB [Streptococcus suis R61]
Length = 237
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+ Q H Y L++WN K+NLTA+ + +EV +H DS+A PI +
Sbjct: 17 LTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIA---PILQGHIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+L+D+G GAG P L + I P VT+++S+NKR FL +L V G
Sbjct: 69 -NEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P +++ G +A K ++E+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A +++ + + P G RT + K + TP K+PR G P K PL
Sbjct: 188 ALNLLFAKVIE--NHDYTLPNGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|402837617|ref|ZP_10886134.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium OBRC8]
gi|402274637|gb|EJU23814.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eubacteriaceae
bacterium OBRC8]
Length = 237
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 18/242 (7%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
I+N SH + E+ +Y D +L++N+ +NLTA+ D ++ +H DS++I+
Sbjct: 12 IMNISHRNDI----YEKFEIYTDYMLEYNKNINLTAITDKQDIYIKHYLDSISIL----- 62
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ D NS K +D+GTGAG P + + + D +TL++S+NKR +FL++ +
Sbjct: 63 ---GYFDIQPNS--KSIDIGTGAGFPSIPVKLLREDIDMTLVDSLNKRIIFLQNLIEKLN 117
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L N+ + RAE L FR+ YD+ ++RAVA M LAEYC P ++ GG + KG +
Sbjct: 118 LKNITPIHSRAEELAHKKEFRQSYDICMSRAVANMSTLAEYCTPFLKKGGHLLCLKGQNV 177
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKV 287
+E+KN + A++ + ++ E Q PF VV K TP YPR GTP+K
Sbjct: 178 DDELKNCQNAMKKLKCKIVD--KKEVQLPFSDLHHNIVVVEKLGDTPDIYPRKSGTPSKN 235
Query: 288 PL 289
PL
Sbjct: 236 PL 237
>gi|307243462|ref|ZP_07525618.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
gi|306493186|gb|EFM65183.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
Length = 242
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 125/225 (55%), Gaps = 10/225 (4%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
++ Y L+++N+ MNLT + + EV +H DS+AI KN Y L
Sbjct: 28 DRFEKYRQILVEYNQHMNLTGITEQREVYIKHFLDSVAIF---KNGYIG-------DGLS 77
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG PGL I P+ ++TLL+S+NKR FL+ L + V GRAE +
Sbjct: 78 VIDVGTGAGFPGLPFKICNPNIRLTLLDSLNKRINFLKAVGQELGLDGIDYVHGRAEDMA 137
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
RE+YD+A ARAVA + +L E C+P VR+GG F+ KG E+++++ A++++G
Sbjct: 138 HKPDHREKYDIATARAVASLPVLLELCVPYVRLGGFFICLKGPSVDAELEDAKNAMKILG 197
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L++ V + +V K TP KYPR G P+K PL
Sbjct: 198 VRLVERIDVSLPDQELKHNILVFKKEELTPAKYPRKAGKPSKNPL 242
>gi|417935558|ref|ZP_12578875.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis X]
gi|343402467|gb|EGV14972.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
infantis X]
Length = 237
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L +Q+ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 16 NLTDQQKFQFERYFELLVEWNQKINLTAITEKEEVYLKHFYDSIA---PILQGLIE---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L V
Sbjct: 69 --NQEIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAEELDLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 127 GRAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R + K + TP KYPR G P K PL
Sbjct: 187 NALNLLFSKVED--NISYTLPNGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|194467503|ref|ZP_03073490.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
gi|194454539|gb|EDX43436.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
Length = 241
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNS 110
+ H L+ Q +Q Y L++ N +NLT + + +EV +H DS+ A P S
Sbjct: 11 ADHGIALSAEQMQQFADYYRLLVETNEHVNLTRITEKDEVYLKHFYDSIMGAFAEPRLES 70
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
L L D+G GAG P L L IA P KVT+++S+NKR FLE V+ L
Sbjct: 71 ----------EELTLCDIGAGAGFPSLPLKIAFPQLKVTIVDSLNKRIAFLEDLVAKLGL 120
Query: 171 LNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
+V ++ RAET K+ +RE++D+ ARAVA + +L+E CLP +VGG F+A K
Sbjct: 121 TDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLPAAKVGGEFIAYKASAA 180
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE++ A++ +G + + ++ +R +V K + TPKKYPR PG P+K P+
Sbjct: 181 PEELQQGGTAIKQLGGKVQKTVTLTLPGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
>gi|365903173|ref|ZP_09440996.1| 16S rRNA methyltransferase GidB [Lactobacillus malefermentans KCTC
3548]
Length = 245
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 9/238 (3%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+ H L+ Q Q Y L+ N +NLT + + ++V +H DSL P
Sbjct: 11 AEHNIMLDEHQMTQFEEYYKLLVATNEHVNLTTITERDDVYLKHFYDSLT--PAF----- 63
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ ++ + L DVG GAG P + L IA P VT+++S+NKR FL+ + L N
Sbjct: 64 -YIEALREQPISLCDVGAGAGFPSIPLKIAFPQLTVTIVDSLNKRITFLKELQTTLGLTN 122
Query: 173 VQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
V RAE G + FR +D+ ARAVA+M +L+E+CLPL +VGG FVA K +
Sbjct: 123 VHFHHARAEEFGGRKSEFRASFDIVTARAVAKMSVLSEFCLPLTKVGGQFVALKAAQADQ 182
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++++ A++L+G + Q + E G R VV K ++TP +YPR GTP + PL
Sbjct: 183 DLESATTAIKLLGGEVKQDVAFELPFDAGTRHIVVINKEKKTPGRYPRKAGTPTREPL 240
>gi|313901364|ref|ZP_07834850.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|373123603|ref|ZP_09537449.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 21_3]
gi|422328377|ref|ZP_16409403.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 6_1_45]
gi|312953852|gb|EFR35534.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|371660635|gb|EHO25885.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 6_1_45]
gi|371660936|gb|EHO26180.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Erysipelotrichaceae bacterium 21_3]
Length = 236
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 130/239 (54%), Gaps = 15/239 (6%)
Query: 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 110
V + H L Q Q Y L++WN+K+NLTA+ D +E+ E+H DS I+P S
Sbjct: 13 VLAKHGMILQEHQLRQFEEYASMLIEWNQKINLTAITDPDEIYEKHFLDS--ILPSFDMS 70
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
S C DVG GAG PG+ L I P+ ++T++E++ KR FL QL
Sbjct: 71 IQG---SFC-------DVGAGAGFPGIPLKIIYPELELTIVETLGKRITFLNALCDKLQL 120
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V V RAE KD RE +D+ ARAVA + +L+E C+PLV+ G F+A KG +
Sbjct: 121 KGVTCVHERAEVYAKD--HRESFDIVSARAVANLPLLSELCIPLVKKQGSFLALKGANGD 178
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE +E+A++L+G + Q V + S QR V +K+R TPKKYPR K PL
Sbjct: 179 EEYALAEKAIRLLGCEMKQR-DVHTLSDGSQRINFVFVKTRPTPKKYPRPFAQMKKNPL 236
>gi|291558324|emb|CBL35441.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum V10Sc8a]
Length = 232
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 22/241 (9%)
Query: 54 SHFETLNTRQQEQ-----IHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK 108
S F+ N + + + LY + L+++N+ +NLTA+ D EV+ +H DS ++P
Sbjct: 9 SEFQKCNIKLSQDKADKLLKLY-EFLVEYNKNVNLTAITDFEEVVVKHFIDS--VLP--- 62
Query: 109 NSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT 168
S D NS+ +DVGTGAG P + L I PD K TLLE++NKRCVFLE A LT
Sbjct: 63 ---FSMIDIKENSSF--IDVGTGAGFPSIPLMIVRPDLKGTLLEALNKRCVFLEKACELT 117
Query: 169 QLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
+ ++ +++ GRAE K+ RE +D A ARAVA M +L EYC+P V+ GG F+A K +
Sbjct: 118 E-VDAKVIHGRAEDYAKEK--REAFDFATARAVAAMPVLCEYCIPYVKTGGRFIALKSVN 174
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E + E+AV+++G + ++ + +R ++ K +TP KYPR+P K P
Sbjct: 175 EDETL--CEKAVKVLGGKIAEIKDYTITNGDNRRLFIID-KVSQTPTKYPRNPSMIKKKP 231
Query: 289 L 289
L
Sbjct: 232 L 232
>gi|223932622|ref|ZP_03624622.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|330832234|ref|YP_004401059.1| methyltransferase GidB [Streptococcus suis ST3]
gi|386583523|ref|YP_006079926.1| methyltransferase GidB [Streptococcus suis D9]
gi|223898732|gb|EEF65093.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|329306457|gb|AEB80873.1| methyltransferase GidB [Streptococcus suis ST3]
gi|353735669|gb|AER16678.1| methyltransferase GidB [Streptococcus suis D9]
Length = 237
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+ Q H Y L++WN K+NLTA+ + +EV +H DS+A PI +
Sbjct: 17 LTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIA---PILQGHIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+L+D+G GAG P L + I P VT+++S+NKR FL +L V G
Sbjct: 69 -NEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P +++ G +A K ++E+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A +++ + + P G RT + K + TP K+PR G P K PL
Sbjct: 188 ALNLLFAKVIE--NHDYTLPNGDPRTLTIVEKKKETPNKFPRKAGLPNKRPL 237
>gi|385259819|ref|ZP_10037979.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK140]
gi|385193233|gb|EIF40612.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
sp. SK140]
Length = 237
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 127/232 (54%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+ Q Y + L++WN K+NLTA+ + EV +H DS+A PI
Sbjct: 17 LSDQQKVQFERYFELLVEWNEKINLTAITEKEEVYLKHFYDSIA---PIIQGLIE----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P VT+++S+NKR FL L NV G
Sbjct: 69 -NQPIKLLDIGAGAGFPSLPMKILYPHLDVTIIDSLNKRINFLNLLAQELGLENVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + + S P G R + K + TP KYPR G P K PL
Sbjct: 188 ALNLLFSKVEENLSY--TLPNGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|313112544|ref|ZP_07798209.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625144|gb|EFQ08434.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 235
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 137/233 (58%), Gaps = 16/233 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL Q +Q+ + + L+ +N+K+NLTA+ D + ++H DSL + S +
Sbjct: 17 TLTGTQLDQLDAFAEILVDYNQKVNLTAITDPEGIEDKHFLDSLL--------FASQPEV 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ ++VDVG GAG PG+V I P+ ++TL+E KR FL++A + L V+ +
Sbjct: 69 AG----RMVDVGAGAGFPGIVTKIYKPELELTLMEPTGKRVEFLKYACAQLGLTGVEFAK 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE + ++REQ+D+A ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ +
Sbjct: 125 ERAEEAARK-AWREQFDLASARAVAALPMLAEYCLPLVKVGGNFLAMKGSSGEEELTAAR 183
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + ++ P G RT ++C K +TP YPR+ G AK PL
Sbjct: 184 GAIKKLGGEYKETRTL--HLPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|427441264|ref|ZP_18925222.1| cell division SAM-dependent methyltransferase [Pediococcus lolii
NGRI 0510Q]
gi|425787137|dbj|GAC46010.1| cell division SAM-dependent methyltransferase [Pediococcus lolii
NGRI 0510Q]
Length = 243
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 9/233 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T++ Q Q Y L++ N +NLTA+ D EV +H DS+ + +T
Sbjct: 16 TVSDHQMRQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP---- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L DVG GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V
Sbjct: 72 ----GIALCDVGAGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVH 127
Query: 178 GRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G K ++R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+
Sbjct: 128 DRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELATG 187
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G LL+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 188 RQAIAVLGGKLLEDRQFALPVTGYERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|418273270|ref|ZP_12888898.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum subsp. plantarum NC8]
gi|376010884|gb|EHS84208.1| methyltransferase, cell division protein GidB [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 244
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q LY L+ N++ NLT + EV +H DSL +P +++
Sbjct: 11 AQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRD 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLG 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L V+ RAET GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K +
Sbjct: 120 LTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|339449384|ref|ZP_08652940.1| 16S rRNA methyltransferase GidB [Lactobacillus fructivorans KCTC
3543]
Length = 240
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 10/242 (4%)
Query: 49 RIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK 108
+ + H L+ +Q++Q Y L+ +N+K+NLT + + ++V +H DSL
Sbjct: 7 KAASEKHNLPLSGQQEQQFATYYKLLVAYNQKVNLTTIVEQDDVYLKHFYDSLT------ 60
Query: 109 NSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT 168
+ N +VDVG GAG P + L I PD KVT+++S+NKR +FL+ +
Sbjct: 61 ---PAFYIPELLQNKSIVDVGAGAGFPSIPLKIINPDLKVTIVDSLNKRIIFLQQLIDQL 117
Query: 169 QLLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGH 227
L +V++V RAE GK RE++D A ARA+A + +L+E CLP+V++GG +A K
Sbjct: 118 GLKDVRLVHARAEEFGGKRSKDREKFDFATARALARLSVLSELCLPMVKIGGKLIALKAA 177
Query: 228 DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKV 287
EE+K ++ A+ +G + + R +V K + TPKKYPR GTP K
Sbjct: 178 RAPEELKAAQHAITTLGGKVEDDFEFKLPENNEVRNIIVIDKVKETPKKYPRKAGTPNKD 237
Query: 288 PL 289
PL
Sbjct: 238 PL 239
>gi|392949970|ref|ZP_10315535.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus pentosus KCA1]
gi|392434853|gb|EIW12812.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus pentosus KCA1]
Length = 244
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q Y L+ N++ NLT + EV +H DSL +P ++
Sbjct: 11 AQHGIALTAKQLAQFATYFKLLVATNQQFNLTTITAEPEVYLKHFYDSLTPAFYVPVLRE 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL+ V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLKDLVQQLD 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET GK RE YDV ARAVA + +L+E CLPLV+VGG VA K +
Sbjct: 120 LEDVQLFHDRAETFAGKKSVHRESYDVVTARAVARLSVLSELCLPLVKVGGQMVALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGKIVQDTAFTLPVTDDPRHIIVIDKRKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|289168084|ref|YP_003446353.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
gi|288907651|emb|CBJ22488.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
Length = 237
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 123/227 (54%), Gaps = 12/227 (5%)
Query: 64 QEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNL 123
+EQ Y + L++WN K+NLTA+ D +EV +H DS+A PI N +
Sbjct: 22 KEQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIA---PILQGLIP------NETI 72
Query: 124 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 183
KL+D+G GAG P L + I P VT+++S+NKR FL+ L V GRAE
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELNLEGVHFYHGRAEDF 132
Query: 184 GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLM 243
+D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+
Sbjct: 133 AQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLL 192
Query: 244 GASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + S P G R V K + TP K+PR G P K PL
Sbjct: 193 FSKVEDNLSY--ALPNGNPRYITVVEKKKETPNKFPRKAGMPNKRPL 237
>gi|291520337|emb|CBK75558.1| 16S rRNA m(7)G-527 methyltransferase [Butyrivibrio fibrisolvens
16/4]
Length = 226
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 117/186 (62%), Gaps = 11/186 (5%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
+Q Q+ L+ + L++ N+ MNLTA+ + +EV+ +H DSL+I + +S + CD
Sbjct: 22 KQISQLDLFYELLVEKNKVMNLTAITEFDEVIIKHFADSLSICTVLPDSVKTVCD----- 76
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
+GTGAG PG+ +AIA P + TL++S+NKR FL+ V L NV ++ RAE
Sbjct: 77 ------LGTGAGFPGIPMAIAFPSLQFTLIDSLNKRIKFLQEVVDALGLNNVTLIHARAE 130
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
G++ +RE +D+ V+RAVA + L+EYCLPLV +GG F++ K D Q E++ S A++
Sbjct: 131 EAGRNKLYRENFDLVVSRAVANISTLSEYCLPLVNIGGYFISYKSGDIQSEIEESGGAIK 190
Query: 242 LMGASL 247
+G +L
Sbjct: 191 KLGGNL 196
>gi|308181815|ref|YP_003925943.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308047306|gb|ADN99849.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 244
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q LY L+ N++ NLT + EV +H DSL +P +++
Sbjct: 11 AQHEIALTAKQLGQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRD 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L IA P +VT+++S+NKR FL V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIAFPQLQVTIVDSLNKRINFLNDLVQQLG 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L V+ RAET GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K +
Sbjct: 120 LTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|307152663|ref|YP_003888047.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
gi|306982891|gb|ADN14772.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
Length = 243
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Query: 52 NSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSY 111
S H++ +Q + LY + LL NR++NLT + + E E+H+ DSL S
Sbjct: 16 ESLHWQPNEQQQAKFQRLYTEILLA-NRQLNLTRIIEPEEFWEKHLWDSL--------SG 66
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
H + NL ++D+GTGAG PG+ +AIA P W VTLL+S+ K+ VFL VS +L
Sbjct: 67 VVHLGLKTD-NLSVIDIGTGAGFPGVPVAIAFPGWTVTLLDSVQKKMVFLNSLVSAMELE 125
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
N ++ R E + +D +RE YD+++ RAVA I AEY LPL+++GGL + +GH E
Sbjct: 126 NTSLLTERVEMIAQDKKYRESYDISLIRAVASASICAEYALPLLKLGGLAILYRGHWSAE 185
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E + + V+ +G + ++ + + R V K TPK+YPR G P + PL
Sbjct: 186 ENLSLKTVVEQLGGKIEEVKQLTTPITKSIRNCVYIRKISATPKQYPRAVGIPRQKPL 243
>gi|315653263|ref|ZP_07906186.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
gi|315489426|gb|EFU79065.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
Length = 224
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 121/216 (56%), Gaps = 10/216 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK-NSYTSHCDS 117
L+ RQQEQ Y L+ N K NLT + + +EV +H DSL P IK S+ +S
Sbjct: 17 LSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT--PIIKFREMISNAES 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C DVG GAG P + + I PD K+T+++S+ KR FL+ V L N+ +V
Sbjct: 75 LC-------DVGAGAGFPSVPIKIIYPDIKLTIIDSLGKRLTFLDKLVKQLGLDNITLVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G+++ RE +DV ARAVA M +L+EYCLPLV+VGG FVA KG +E+ ++
Sbjct: 128 SRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVKVGGYFVALKGPKLSDELFEAQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRT 273
A+ ++G + + C RT V K +++
Sbjct: 188 NALTILGGQIEKTCEFTLPDSMDDRTLVAVKKIKKS 223
>gi|363889814|ref|ZP_09317168.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium CM5]
gi|361966353|gb|EHL19273.1| 16S rRNA methyltransferase GidB [Eubacteriaceae bacterium CM5]
Length = 237
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 18/242 (7%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
I+N SH + E+ +Y D +L++N+ +NLTA+ D ++ +H DS++I+
Sbjct: 12 IMNISHRNDI----YEKFEIYTDYMLEYNKNINLTAITDKQDIYIKHYLDSISIL----- 62
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ D NS K +D+GTGAG P + + + D +TL++S+NKR +FL++ +
Sbjct: 63 ---GYFDIQPNS--KSIDIGTGAGFPSIPVKLLREDIDMTLVDSLNKRIIFLQNLIEKLN 117
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L N+ + RAE L FR+ YD+ ++RAVA M LAEYC P ++ GG + KG +
Sbjct: 118 LKNIIPIHSRAEELAHKKEFRQSYDICMSRAVANMSTLAEYCTPFLKKGGHLLCLKGQNV 177
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKV 287
+E+KN + A++ + ++ E Q PF VV K TP YPR GTP+K
Sbjct: 178 DDELKNCQNAMKKLKCKIVD--KKEVQLPFSDLHHNIVVVEKLGDTPDIYPRKSGTPSKN 235
Query: 288 PL 289
PL
Sbjct: 236 PL 237
>gi|385821898|ref|YP_005858240.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
gi|409995867|ref|YP_006750268.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
casei W56]
gi|327384225|gb|AEA55699.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
gi|406356879|emb|CCK21149.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
casei W56]
Length = 243
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDSRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|451342870|ref|ZP_21911951.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eggerthia
catenaformis OT 569 = DSM 20559]
gi|449338409|gb|EMD17556.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Eggerthia
catenaformis OT 569 = DSM 20559]
Length = 231
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 13/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q Y L++WN KMNLTA+ D ++V +H DSL I S+ S
Sbjct: 14 LTDYQIHQFERYYQLLVEWNEKMNLTAITDRDDVYFKHFYDSLTI------SFDFPFSSQ 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+D+G GAG P + L I PD K+T+++S+ KR FL+ + +L +V+ +
Sbjct: 68 S-----LIDIGAGAGFPSIPLKIIYPDLKITIVDSLGKRIQFLKMLIKELELDHVEAIHT 122
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K +RE +D+A ARAVA + IL E CLP V+ G F+ KG +EE+K +++
Sbjct: 123 RAEDYVK--LYRESFDLATARAVARLNILDELCLPFVKENGYFLVLKGKAGEEELKEAKK 180
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++++G +++ S R ++ K R+TP +YPR G K PL
Sbjct: 181 GIKILGGQIIKDVSFALSKDQDYRHNIIIHKIRKTPSQYPRLFGKIKKQPL 231
>gi|304385713|ref|ZP_07368057.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
gi|304328217|gb|EFL95439.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
Length = 243
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 9/233 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T++ Q Q Y L++ N +NLTA+ D EV +H DS+ + +T
Sbjct: 16 TVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP---- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L DVG GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V
Sbjct: 72 ----GIALCDVGAGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVH 127
Query: 178 GRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G K ++R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+
Sbjct: 128 DRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELATG 187
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G LL+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 188 RQAIAVLGGKLLEDRQFALPVTGDERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|191637023|ref|YP_001986189.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BL23]
gi|385818723|ref|YP_005855110.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
gi|190711325|emb|CAQ65331.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Lactobacillus casei BL23]
gi|327381050|gb|AEA52526.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
Length = 247
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 15 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 74
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 75 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 123
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 124 LTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 183
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 184 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDSRHLLVIDKVKPTPNKYPRKPGIPNKQP 243
Query: 289 L 289
L
Sbjct: 244 L 244
>gi|239631036|ref|ZP_04674067.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065357|ref|YP_003787380.1| cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|417979591|ref|ZP_12620282.1| rRNA small subunit methyltransferase [Lactobacillus casei 12A]
gi|417982414|ref|ZP_12623070.1| rRNA small subunit methyltransferase [Lactobacillus casei 21/1]
gi|239527319|gb|EEQ66320.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300437764|gb|ADK17530.1| Cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|410527300|gb|EKQ02172.1| rRNA small subunit methyltransferase [Lactobacillus casei 12A]
gi|410529849|gb|EKQ04637.1| rRNA small subunit methyltransferase [Lactobacillus casei 21/1]
Length = 243
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSQHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|116514833|ref|YP_813739.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385816490|ref|YP_005852881.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
gi|418030106|ref|ZP_12668621.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1632]
gi|418036773|ref|ZP_12675171.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1519]
gi|122274435|sp|Q047S1.1|RSMG_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116094148|gb|ABJ59301.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126527|gb|ADY85857.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
gi|354686791|gb|EHE86921.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1519]
gi|354688159|gb|EHE88204.1| Transferase transferring one-carbon groups [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1632]
Length = 239
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHC 115
L+ Q++Q Y L++ N +NLT + D +EV +H DS L + P +
Sbjct: 17 LSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLLWPEV-------- 68
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
KL DVG GAG P L + I PD +VT+++S+ KR FL + + V +
Sbjct: 69 ---FAEGAKLCDVGAGAGFPSLPIKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPL +VGG F+A KG EE+++
Sbjct: 126 VHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELED 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A++ +G ++ + RT V+ K + TP KYPR GTP + PL
Sbjct: 186 AKSALEKLGGEVVFTRVITLPGSAEVRTLVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|410659614|ref|YP_006911985.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Dehalobacter sp. DCA]
gi|410662594|ref|YP_006914965.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Dehalobacter sp. CF]
gi|409021969|gb|AFV04000.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Dehalobacter sp. DCA]
gi|409024950|gb|AFV06980.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Dehalobacter sp. CF]
Length = 251
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 133/237 (56%), Gaps = 20/237 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ E+ Y LLQ N +MNLTA+ D E++ +H DSL + I + Y
Sbjct: 29 LSAEHLEKFEQYTVLLLQRNEQMNLTAITDPAEMVIKHYLDSLVFVKWIMHYYP------ 82
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + + D+GTGAG PG+ + I P KV L++++ KR FL+ V + L V+
Sbjct: 83 -NGQIVIADLGTGAGFPGIPIKILLPQIKVVLVDALAKRIHFLQE-VCDSLGLKVETCHA 140
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+ ++R+++D+ VARAVAE+ +L EY PL++VGG F+AAKG DP+ E+ ++
Sbjct: 141 RAEDIGRSKAYRQRFDITVARAVAELPVLLEYATPLLKVGGRFIAAKGIDPENEITLAKN 200
Query: 239 AVQLMGASLLQLCSVESQSPFG------QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++ C VE + R+ ++ K TP +YPR G P K PL
Sbjct: 201 ALRILN------CEVEHVEKYSLAEGADNRSLIIVKKILNTPAQYPRQAGKPKKTPL 251
>gi|317055656|ref|YP_004104123.1| methyltransferase GidB [Ruminococcus albus 7]
gi|315447925|gb|ADU21489.1| methyltransferase GidB [Ruminococcus albus 7]
Length = 236
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 14/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q E++ Y D L+++N +NLTA+ D + +H DS I P +T
Sbjct: 17 LSAEQAERLEKYADMLVEYNNMVNLTAITDDEGIAVKHFLDS--IYP-----FTLF---D 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ ++DVGTGAG P L + D ++TLL+S+NKR FL+ ++S T L+ + V G
Sbjct: 67 LPEGVSMIDVGTGAGFPSCPLKVYRGDIRLTLLDSLNKRVNFLQ-SLSDTIGLDAECVHG 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK +RE +D+A ARAVA + L EYCLP V+VGGLFV+ KG EE+ ++
Sbjct: 126 RAEEFGKKDEYRESFDIATARAVANLTDLCEYCLPFVKVGGLFVSLKGSSGSEELDKAKP 185
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G ++ VE P G RT ++ K TP KYPR+ G K L
Sbjct: 186 AIKLLGGKTEKV--VEYTLPGGDGRTLILIRKVSPTPAKYPRNAGQMKKRSL 235
>gi|322391720|ref|ZP_08065187.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
gi|321145430|gb|EFX40824.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
Length = 237
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L +Q+ Q Y L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 16 SLTEQQKMQFEHYFQLLVEWNEKINLTAITDKEEVYLKHFYDSVA---PILQGLIP---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P + + I P+ +VT+++S+NKR FL+ L V
Sbjct: 69 --NETIKLLDIGAGAGFPSIPMKILYPNLEVTIIDSLNKRINFLQLLAGELGLEGVHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +D +FR Q+D+ ARAVA M++L+E +P ++V G +A K + EE+ +++
Sbjct: 127 GRAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPFLKVDGKLLALKASNAPEELTDAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + ++ P G R + K + TP KYPR G P K PL
Sbjct: 187 NALNLLFSKVED--NISYTLPNGDPRYMTIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417993308|ref|ZP_12633657.1| rRNA small subunit methyltransferase [Lactobacillus casei CRF28]
gi|410531780|gb|EKQ06496.1| rRNA small subunit methyltransferase [Lactobacillus casei CRF28]
Length = 243
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QVISVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|417985513|ref|ZP_12626097.1| rRNA small subunit methyltransferase [Lactobacillus casei 32G]
gi|418003925|ref|ZP_12643976.1| rRNA small subunit methyltransferase [Lactobacillus casei UW1]
gi|410528541|gb|EKQ03393.1| rRNA small subunit methyltransferase [Lactobacillus casei 32G]
gi|410551129|gb|EKQ25199.1| rRNA small subunit methyltransferase [Lactobacillus casei UW1]
Length = 243
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|237735332|ref|ZP_04565813.1| ribosomal RNA small subunit methyltransferase G [Mollicutes
bacterium D7]
gi|365829709|ref|ZP_09371301.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 3_3_56FAA]
gi|229381077|gb|EEO31168.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
D7]
gi|365264442|gb|EHM94249.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 3_3_56FAA]
Length = 233
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 122/237 (51%), Gaps = 24/237 (10%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q Q Y L++WN KMNLTA+ D V +H DSL I +T
Sbjct: 16 TLTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLTI--AFDFDFTDQS-- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+VDVG GAG P + L I P+ K+T+++S+ KR FL H L N Q +
Sbjct: 72 -------IVDVGAGAGFPSVPLKIVYPELKITIVDSLTKRITFLNHLFKELNLSNCQAIS 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE KD R++ D+ +ARAVA + IL E CLPLV+VGG F+A KG EE++ +
Sbjct: 125 ARAEDYAKD--HRQKCDIVMARAVARLNILDELCLPLVKVGGYFLALKGLKATEELEEAG 182
Query: 238 RAVQLMGASLLQLCSVESQSPF-----GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + L+G VE F R+ ++ K R TP KYPR G K PL
Sbjct: 183 KGIVLLGG------QVEKSIDFTLTNDNHRSNIIIKKVRDTPAKYPRMFGKIKKQPL 233
>gi|389856095|ref|YP_006358338.1| methyltransferase GidB [Streptococcus suis ST1]
gi|353739813|gb|AER20820.1| methyltransferase GidB [Streptococcus suis ST1]
Length = 237
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+ Q H Y L++WN K+NLTA+ + +EV +H DS+A PI +
Sbjct: 17 LTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIA---PILQGHIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+L+D+G GAG P L + I P VT+++S+NKR FL +L G
Sbjct: 69 -NEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGFHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P +++ G +A K ++E+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLKLNGKLIALKASSAEDELTQAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A +++ + + P G RT + K + TP K+PR G P K PL
Sbjct: 188 ALSLLFAKVIE--NHDYTLPNGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|346314984|ref|ZP_08856500.1| hypothetical protein HMPREF9022_02157 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345905084|gb|EGX74824.1| hypothetical protein HMPREF9022_02157 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 236
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 130/239 (54%), Gaps = 15/239 (6%)
Query: 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNS 110
V + H L Q Q Y L++WN+K+NLTA+ D +E+ E+H DS I+P S
Sbjct: 13 VLAKHGMILQEHQLRQFEEYASMLIEWNQKINLTAITDPDEIYEKHFLDS--ILPSFDMS 70
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
S C DVG GAG PG+ L I P+ ++T++E++ KR FL +L
Sbjct: 71 IQG---SFC-------DVGAGAGFPGIPLKIIYPELELTIVETLGKRITFLNALCDKLKL 120
Query: 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V V RAE KD RE +D+ ARAVA + +L+E C+PLV+ G F+A KG +
Sbjct: 121 KGVACVHERAEVYAKD--HRESFDIVSARAVANLPLLSELCIPLVKKQGSFLALKGANGD 178
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE +E+A++L+G + Q V + S QR V +K+R TPKKYPR K PL
Sbjct: 179 EEYALAEKAIRLLGCEMKQR-DVHTLSDGSQRINFVFVKTRPTPKKYPRPFAQMKKNPL 236
>gi|256545942|ref|ZP_05473297.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
gi|256398364|gb|EEU11986.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
Length = 209
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 132/226 (58%), Gaps = 19/226 (8%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
++ +Y L++ N+K NLT++ D E+ +H +DSL I S N +K
Sbjct: 2 DKFKIYEQMLIETNKKFNLTSIDDPKEIRIKHFEDSLTI------------KSYINKGMK 49
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++D+G+GAG PG+ L I D+ +TL++S+NK+ F+ + +L + + RAE
Sbjct: 50 VLDIGSGAGFPGIPLRIET-DFDLTLIDSVNKKVNFMNEVIEELKLEKAKAIHIRAEDYA 108
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
KD RE++D+ ++RAVA + L+EY LP ++VGG+F+A KG +EE + ++ A++++G
Sbjct: 109 KD--HREEFDMVISRAVANLSTLSEYALPFLKVGGIFIAMKGPKAEEEYEQAQSALKILG 166
Query: 245 ASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ + +++ +G R ++ K R T KKYPR P K PL
Sbjct: 167 GELINIDTIDL---YGNTRKNILIKKVRSTKKKYPRGKNQPKKNPL 209
>gi|167751434|ref|ZP_02423561.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
gi|167655680|gb|EDR99809.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum DSM 15702]
Length = 232
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 138/235 (58%), Gaps = 17/235 (7%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
+ E + + + LY + L+++N+ +NLTA+ D EV+ +H DS ++P S
Sbjct: 15 NIELSQDKADKLLKLY-EFLVEYNQNVNLTAITDFEEVVVKHFIDS--VLP------FSM 65
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
D NS+ +DVGTGAG P + L I PD K TLLE++NKRCVFLE A LT+ ++ +
Sbjct: 66 IDIKENSSF--IDVGTGAGFPSIPLMIVRPDLKGTLLEALNKRCVFLEKACELTE-VDAK 122
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
++ GRAE K+ RE +D A ARAVA M +L EYC+P V+ GG F+A K + E +
Sbjct: 123 VIHGRAEDYAKEK--REAFDFATARAVAAMPVLCEYCIPYVKTGGRFIALKSVNEDETL- 179
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E+AV+++G + ++ + +R ++ K +TP KYPR+P K PL
Sbjct: 180 -CEKAVKVLGGKIAEIKDYTITNGDNRRLFIID-KVSQTPTKYPRNPSMIKKKPL 232
>gi|429764085|ref|ZP_19296414.1| 16S rRNA methyltransferase GidB [Clostridium celatum DSM 1785]
gi|429188771|gb|EKY29638.1| 16S rRNA methyltransferase GidB [Clostridium celatum DSM 1785]
Length = 210
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 14/216 (6%)
Query: 76 QWNRKMNLTAVKDVNEVMERHIDDSLAIIP--PIKNSYTSHCDSSCNSNLKLVDVGTGAG 133
+WN K+NLTA+ + E +++H D + I+N+ T ++DVGTGAG
Sbjct: 6 EWNEKINLTAIIEDEEFIKKHFIDCMKAFKSDAIRNAKT------------IIDVGTGAG 53
Query: 134 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 193
PG+ +AI P+ +TLL+S+NKR FL V L NV + RAE + RE++
Sbjct: 54 FPGMPIAILHPNAHITLLDSLNKRINFLNIVVRELGLKNVTTIHSRAEDGARKPELREKF 113
Query: 194 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253
D+A +RAVA M +L+E+C+P V+ GG FVA KG EE++N A++++G L ++ V
Sbjct: 114 DIATSRAVANMAVLSEFCMPYVKKGGYFVALKGPSIDEELENGSNAIKILGGELKEIIEV 173
Query: 254 ESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + V K + PK YPR GT K PL
Sbjct: 174 SIEETDLKHNIVEVKKVKECPKTYPRKAGTVNKKPL 209
>gi|220933186|ref|YP_002510094.1| methyltransferase GidB [Halothermothrix orenii H 168]
gi|219994496|gb|ACL71099.1| methyltransferase GidB [Halothermothrix orenii H 168]
Length = 240
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 17/242 (7%)
Query: 53 SSHFETLNTRQQE----QIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIK 108
++ E +N QE Q+ Y+ L + N+K NLTA+ + +E++ +H DSL+ +
Sbjct: 11 AAGLEAMNIEYQEYMIDQLQDYLKFLKEENKKYNLTALDEPDEIITKHFFDSLSFL---- 66
Query: 109 NSYTSHCDSSCN-SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL 167
S N K +D+GTGAG PG+V+ I P + LL+S+ KR FL+ +
Sbjct: 67 --------SKFNLKQEKFIDIGTGAGFPGMVIKIFKPGLDMILLDSLAKRVNFLKKLSTR 118
Query: 168 TQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGH 227
L +++V RAE L +D +RE +D VARAVA + L+EY LPLVR+ G V KG
Sbjct: 119 LGLKKLEVVHARAEDLARDKIYREGFDWVVARAVAPVNTLSEYTLPLVRLNGKAVFFKGP 178
Query: 228 DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKV 287
+EE++ ++ A+ ++G L V+ G+R V+ K TP+KYPR G P K
Sbjct: 179 GYKEELQEAQNALAILGGRLKDTIKVKVPDLKGERYLVLIEKDSSTPEKYPRRAGIPKKR 238
Query: 288 PL 289
PL
Sbjct: 239 PL 240
>gi|310830135|ref|YP_003962492.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
gi|308741869|gb|ADO39529.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
Length = 239
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 136/236 (57%), Gaps = 19/236 (8%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
++ +Q + LY++ LL N K+N+T + DV+E +E+H+ DSL + I S
Sbjct: 17 AIDEKQSRLMILYMEKLLVMNEKINVTRITDVDEFIEKHLIDSLTCLKFIHKDVKS---- 72
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++DVGTG G PG+ LA+ P+ ++T++++ K+ +E + NV+ +
Sbjct: 73 -------ILDVGTGGGFPGVPLAVMLPEAEITMMDATGKKLKVIEDICREIGIKNVEFLH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE LGKD ++RE YD V+RAVA + +L+E CLPL + GG F+A KG + EE+ E
Sbjct: 126 GRAEDLGKDPAYREGYDCIVSRAVANLCLLSELCLPLAKKGGQFIALKGKNYLEEMDEGE 185
Query: 238 RAVQLMGASLLQLCSVES----QSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G ++ +ES QS ++ K ++TP+K+PR G K P
Sbjct: 186 KAIKVLGG---KITGIESCLLLQSDL-VHVIILVDKVKKTPEKFPRSFGKIKKEPF 237
>gi|297588069|ref|ZP_06946713.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
gi|297574758|gb|EFH93478.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
Length = 230
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 134/240 (55%), Gaps = 21/240 (8%)
Query: 57 ETLNTRQ----QEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
ETLN + QI L Y+D +L+ N+ MNLTA+ + +H DSL ++ N
Sbjct: 5 ETLNDYEIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVL----N 60
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ N ++DVGTGAG P + + IA D K TLL+S+ KR FL + Q
Sbjct: 61 LF------DFEENKTIIDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLRDVIDELQ 114
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L +++ V RAE + +RE+YD ++RAV+++ LAE+CLP V+VGG +A KG
Sbjct: 115 LTDIKAVHERAEECTRTAEYRERYDYCISRAVSKLNTLAEFCLPFVKVGGYMIAMKGKSD 174
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +V E A++++G + Q +++ + R+ V+ K + TPKKYPR G P K PL
Sbjct: 175 ETDV--GENAIKILGGKIEQ--TIDYKIDDEDRSLVIIKKIKETPKKYPRGGGKPKKNPL 230
>gi|146318067|ref|YP_001197779.1| 16S rRNA methyltransferase GidB [Streptococcus suis 05ZYH33]
gi|146320245|ref|YP_001199956.1| 16S rRNA methyltransferase GidB [Streptococcus suis 98HAH33]
gi|253751261|ref|YP_003024402.1| 16S rRNA methyltransferase GidB [Streptococcus suis SC84]
gi|253753162|ref|YP_003026302.1| 16S rRNA methyltransferase GidB [Streptococcus suis P1/7]
gi|253754985|ref|YP_003028125.1| 16S rRNA methyltransferase GidB [Streptococcus suis BM407]
gi|386577367|ref|YP_006073772.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|386579348|ref|YP_006075753.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
gi|386581412|ref|YP_006077816.1| 16S rRNA methyltransferase GidB [Streptococcus suis SS12]
gi|386587643|ref|YP_006084044.1| 16S rRNA methyltransferase GidB [Streptococcus suis A7]
gi|403061053|ref|YP_006649269.1| 16S rRNA methyltransferase GidB [Streptococcus suis S735]
gi|166224623|sp|A4VZL7.1|RSMG_STRS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224625|sp|A4VTE0.1|RSMG_STRSY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145688873|gb|ABP89379.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 05ZYH33]
gi|145691051|gb|ABP91556.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 98HAH33]
gi|251815550|emb|CAZ51133.1| methyltransferase GidB [Streptococcus suis SC84]
gi|251817449|emb|CAZ55190.1| methyltransferase GidB [Streptococcus suis BM407]
gi|251819407|emb|CAR44867.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|292557829|gb|ADE30830.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|319757540|gb|ADV69482.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
gi|353733558|gb|AER14568.1| 16S rRNA methyltransferase GidB [Streptococcus suis SS12]
gi|354984804|gb|AER43702.1| 16S rRNA methyltransferase GidB [Streptococcus suis A7]
gi|402808379|gb|AFQ99870.1| 16S rRNA methyltransferase GidB [Streptococcus suis S735]
Length = 237
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L +Q+ Q H Y L++WN K+NLTA+ + +EV +H DS+A P+ +
Sbjct: 17 LTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIA---PLLQGHIQ----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N L+L+D+G GAG P L + I P VT+++S+NKR FL +L V G
Sbjct: 69 -NEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLAEELELEGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR Q+D+ ARAVA M+IL+E +P +++ G +A K ++E+ ++
Sbjct: 128 RAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLKLHGKLIALKASSAEDELTQAKN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ A +++ + + P G RT + K + TP K+PR G P K PL
Sbjct: 188 ALNLLFAKVIE--NHDYTLPNGDPRTLTIVEKKKETPNKFPRKAGMPNKRPL 237
>gi|375092571|ref|ZP_09738849.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Helcococcus
kunzii ATCC 51366]
gi|374560740|gb|EHR32097.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Helcococcus
kunzii ATCC 51366]
Length = 235
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 124/232 (53%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q + + D L +WN K+++T + + EV +H DSL I K Y
Sbjct: 13 NLTDEQIAKFQHFYDLLDEWNYKIDITKIVEEEEVYIKHFLDSLLIT---KAGY------ 63
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N ++D+GTG G PG+ L I LL+S+ KR FL+ V +L NV +
Sbjct: 64 -FEKNQNIIDIGTGGGFPGVPLKIYNDTLSFVLLDSLKKRINFLDKVVEELKLDNVVPLH 122
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + + RE +D AV+RAVA M+ L EYCLP V+VGG F+A KG + ++E+ S+
Sbjct: 123 GRAEEIARKEGMRESFDSAVSRAVAPMQTLLEYCLPFVKVGGYFIAMKGPNYKDELNLSK 182
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G L ++ E G R+ +V K + TP ++PR G P PL
Sbjct: 183 GAINLLGGLLDKVIEYELPLGLGSRSLIVIKKIKATPHRFPRAGGKPRSNPL 234
>gi|167754940|ref|ZP_02427067.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
gi|374626678|ref|ZP_09699089.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 8_2_54BFAA]
gi|167704990|gb|EDS19569.1| 16S rRNA methyltransferase GidB [Clostridium ramosum DSM 1402]
gi|373913925|gb|EHQ45759.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Coprobacillus
sp. 8_2_54BFAA]
Length = 233
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 122/237 (51%), Gaps = 24/237 (10%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL +Q Q Y L++WN KMNLTA+ D V +H DSL I +T
Sbjct: 16 TLTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLTI--AFDFDFTDQ--- 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+VDVG GAG P + L I P+ K+T+++S+ KR FL H L N Q +
Sbjct: 71 ------NIVDVGAGAGFPSVPLKIVYPELKITIVDSLTKRITFLNHLFKELNLSNCQAIS 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE KD R++ D+ +ARAVA + IL E CLPLV+VGG F+A KG EE++ +
Sbjct: 125 ARAEDYAKD--HRQKCDIVMARAVARLNILDELCLPLVKVGGYFLALKGLKATEELEEAG 182
Query: 238 RAVQLMGASLLQLCSVESQSPF-----GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + L+G VE F R+ ++ K R TP KYPR G K PL
Sbjct: 183 KGIVLLGG------QVEKSIDFTLTNDNHRSNIIIKKVRDTPAKYPRMFGKIKKQPL 233
>gi|423335758|ref|ZP_17313530.1| glucose-inhibited division protein B [Lactobacillus reuteri ATCC
53608]
gi|337728982|emb|CCC04102.1| glucose-inhibited division protein B [Lactobacillus reuteri ATCC
53608]
Length = 241
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNS 110
+ H TL+ Q +Q Y L++ N +NLT + + +EV +H DS+ A P S
Sbjct: 11 ADHGITLSAEQMQQFADYYRLLVETNEHVNLTRITEKDEVYLKHFYDSITGAFAEPRLES 70
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
L L D+G GAG P L L IA P KVT+++S+NKR FLE V+ +
Sbjct: 71 ----------EELTLCDIGAGAGFPSLPLKIAFPQLKVTIVDSLNKRIAFLEDLVAKLGI 120
Query: 171 LNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
+V ++ RAET K+ +RE++D+ ARAVA + +L+E CLP +V G F+A K
Sbjct: 121 TDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLPAAKVSGEFIAYKASAA 180
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE++ A++ +G + + ++ +R +V K + TPKKYPR PG P+K P+
Sbjct: 181 PEELQQGGTAIKQLGGKVQKTVTLTLPGTDEERNIIVIDKIKATPKKYPRRPGLPSKKPI 240
>gi|428226562|ref|YP_007110659.1| 16S rRNA m(7)G-527 methyltransferase [Geitlerinema sp. PCC 7407]
gi|427986463|gb|AFY67607.1| 16S rRNA m(7)G-527 methyltransferase [Geitlerinema sp. PCC 7407]
Length = 255
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 135/230 (58%), Gaps = 7/230 (3%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q Q + +L+ N+++NLT + + E E+H+ DSLA I + + + +
Sbjct: 30 QLAQFQRLYEHILEANQQLNLTRITEPLEFWEKHLWDSLAGIASMLR-LEALAEETALQP 88
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
++ +D+GTGAG PG+ +AIA P W VTL +S K+ +LE + L+N + V GRAET
Sbjct: 89 MQGIDIGTGAGFPGVPVAIARPHWTVTLTDSTRKKITYLEKLTADLGLMNTRTVVGRAET 148
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
LG++ R++YD+A+ RAV + AEY LPL+RVGGL V +G +E+ K E AV+
Sbjct: 149 LGQEKQHRDRYDLAMIRAVGPASVCAEYTLPLLRVGGLAVLYRGQWSEEDTKALEPAVET 208
Query: 243 MGASLLQLCSVES-QSPF--GQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G ++ SVES +P G R + K TP+++PR PG P + PL
Sbjct: 209 LGG---EVASVESWATPLTGGVRNCLYLRKVGPTPREFPRLPGVPTQRPL 255
>gi|169825319|ref|YP_001692930.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302380961|ref|ZP_07269422.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
gi|193806443|sp|B0S3V0.1|RSMG_FINM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167832124|dbj|BAG09040.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302311182|gb|EFK93202.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
Length = 230
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 133/240 (55%), Gaps = 21/240 (8%)
Query: 57 ETLNTRQ----QEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
ETLN QI L Y+D +L+ N+ MNLTA+ + +H DSL ++ N
Sbjct: 5 ETLNDYDIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVL----N 60
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ N ++DVGTGAG P + + IA D K TLL+S+ KR FL+ +
Sbjct: 61 LF------DFEENKTIIDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLKDVIDELH 114
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L +++ V RAE + +REQYD ++RAV+++ LAE+CLP V+VGG +A KG
Sbjct: 115 LTDIKAVHERAEECTRTAEYREQYDYCISRAVSKLDTLAEFCLPFVKVGGYMIAMKGKSD 174
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +V E A++++G + Q +++ + R+ VV K + TPKKYPR G P K PL
Sbjct: 175 ETDV--GENAIKILGGKIEQ--TIDYKIDDEDRSLVVIKKIKETPKKYPRGGGKPKKNPL 230
>gi|257437747|ref|ZP_05613502.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
gi|257199762|gb|EEU98046.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
Length = 235
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 135/233 (57%), Gaps = 16/233 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q +Q+ + L+ +N+K+NLTA+ D + ++H DSL + S +
Sbjct: 17 ALTGEQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSLL--------FASQPEV 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ K+VDVG GAG PG+V I P+ ++TL+E KR FL++A + L V+ +
Sbjct: 69 AG----KMVDVGAGAGFPGIVTKIYKPELELTLMEPTGKRVEFLKYACAQLGLTGVEFAK 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE + ++REQ+D+A ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ +
Sbjct: 125 ERAEEAARK-AWREQFDLASARAVAALPMLAEYCLPLVKVGGSFLAMKGASGEEELAAAR 183
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + ++ P G RT ++C K +TP YPR+ G AK PL
Sbjct: 184 GAIRKLGGEYKETRTL--HLPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|363896914|ref|ZP_09323462.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB7]
gi|361960102|gb|EHL13360.1| 16S rRNA methyltransferase GidB [Oribacterium sp. ACB7]
Length = 249
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 127/231 (54%), Gaps = 3/231 (1%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q + Y L++ N+ MNLTA+ + +V+ +H DSLA++ K + + S
Sbjct: 21 LQEEQLQQFYCYYTLLVEKNKVMNLTAITEEEDVIVKHFIDSLAMV---KLNVSRETFSK 77
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+DVGTGAG PGL + IA P ++L +S+ KR FLE V L V G
Sbjct: 78 WIEGRHCMDVGTGAGFPGLAIKIAFPSISISLSDSLQKRIHFLEEVVRELGLKGVDFHHG 137
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE LGK REQYD+ +RAVA + L+EY LP V+ GG F+A K D EE++ ++
Sbjct: 138 RAEDLGKKPELREQYDLVFSRAVANLSTLSEYDLPFVKKGGYFLAMKSKDISEELEKGKK 197
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G L ++ R+ ++ K T KKYPR G P+K PL
Sbjct: 198 AIHLLGGKLEEVLEYTLPETDIGRSLLLVQKIENTAKKYPRKAGVPSKEPL 248
>gi|365838855|ref|ZP_09380112.1| 16S rRNA methyltransferase GidB [Anaeroglobus geminatus F0357]
gi|364566365|gb|EHM44057.1| 16S rRNA methyltransferase GidB [Anaeroglobus geminatus F0357]
Length = 237
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 16/230 (6%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q E+ + L++ NR MNLTA+ + +EV +H DSL T + ++ +
Sbjct: 21 QLEKFETFAQMLIEKNRVMNLTAITEADEVTVKHFIDSL----------TCYDETFFAAG 70
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
++D+GTGAG PG+ LAI D K+T +S+ KR FL + N + GRAE
Sbjct: 71 ASVLDLGTGAGFPGIPLAIMHDDLKITFFDSLQKRLNFLRDVTTAIGYKNASFLHGRAEE 130
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
FRE +DV ARAVA + +LAE+ LP V++GG F+A KG +EE+KN+ A+++
Sbjct: 131 EAHKKEFREFFDVVTARAVARLPVLAEWALPYVKIGGTFIALKGAAYEEELKNAVNALKI 190
Query: 243 MGASLLQLCSVESQSPFGQ---RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+GA ++ SV+ +S G R + K + +P +YPR P AK PL
Sbjct: 191 LGA---EVESVQMKSLPGLTDIRAVIYIKKVKESPFEYPRKPKVAAKNPL 237
>gi|300814759|ref|ZP_07095007.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511146|gb|EFK38398.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 231
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 122/231 (52%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN E + LL++N+ N+T + D +E +H DSL+I
Sbjct: 12 LNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKT----------GL 61
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N+K++D+GTG G PG+ L + D ++L++S+NKR VFL A+ L N++ +
Sbjct: 62 IRDNMKILDLGTGGGFPGVPLKLYKKDLDISLVDSLNKRIVFLNKAIEELDLKNIKAIHA 121
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L D +RE++ + +RAVA +R L EY LP V VGG F+A KG + EE+K
Sbjct: 122 RAEELAFDKDYREKFQLVTSRAVARLRTLLEYALPFVEVGGYFIAMKGPEYNEEIKEVSN 181
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++G L+++ ++ + ++ K + TP KYPR G P PL
Sbjct: 182 TFNILGGKLIEVMEIDLPLDI-KHYLLITKKIKPTPMKYPRQGGKPKSKPL 231
>gi|269798906|ref|YP_003312806.1| methyltransferase GidB [Veillonella parvula DSM 2008]
gi|269095535|gb|ACZ25526.1| methyltransferase GidB [Veillonella parvula DSM 2008]
Length = 250
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQ-EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
SHF L T +Q + +LY +++ N+ +NLT + ++ EV+ +H+ DSL+ Y
Sbjct: 24 SHFGLLCTEEQAKDFYLYYVHMIETNKYLNLTGITNMKEVVIKHMIDSLS-------CYD 76
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S S + ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N
Sbjct: 77 SEI---IKSGMTIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLNFLESVIDELKLTN 133
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EE
Sbjct: 134 CTTLHGRAEDLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVVALKGAIYEEE 192
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK S +A+ ++ A++ ++ +V + +R + K+ +TPK+YPR P PL
Sbjct: 193 VKESNKALSILKATIEEIRTVTLPTLDDKRAILYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|422844895|ref|ZP_16891605.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|325684926|gb|EGD27070.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 239
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHC 115
L+ Q++Q Y L++ N +NLT + D +EV +H DS L + P +
Sbjct: 17 LSPVQEQQFKTYFKELVRANEHVNLTRITDEDEVYLKHFYDSVTPLLLWPEV-------- 68
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
KL DVG GAG P L + I PD +VT+++S+ KR FL + + V +
Sbjct: 69 ---FAEGAKLCDVGAGAGFPSLPIKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPL +VGG F+A KG EE+++
Sbjct: 126 VHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELED 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A++ +G ++ + +R V+ K + TP KYPR GTP + PL
Sbjct: 186 AKSALEKLGGEVVFSRVITLPGSAEERILVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|282881764|ref|ZP_06290422.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
gi|281298374|gb|EFA90812.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
Length = 231
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 122/231 (52%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN E + LL++N+ N+T + D +E +H DSL+I
Sbjct: 12 LNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKT----------GL 61
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N+K++D+GTG G PG+ L + D ++L++S+NKR VFL A+ L N++ +
Sbjct: 62 IRDNMKILDLGTGGGFPGVPLKLYKKDLDISLVDSLNKRIVFLNKAIEELDLKNIKAIHA 121
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L D +RE++ + +RAVA +R L EY LP V VGG F+A KG + EE+K
Sbjct: 122 RAEELAFDEDYREKFQLVTSRAVARLRTLLEYALPFVEVGGYFIAMKGPEYNEEIKEVSN 181
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++G L+++ ++ + ++ K + TP KYPR G P PL
Sbjct: 182 TFNILGGKLIEVMEIDLPLDI-KHYLLITKKIKPTPMKYPRQGGKPKSKPL 231
>gi|282848773|ref|ZP_06258168.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
gi|282581559|gb|EFB86947.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
Length = 250
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQ-EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
SHF T +Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y
Sbjct: 24 SHFGLPCTEEQAKDFYMYYAHMIETNKYLNLTGITDMKEVVVKHMIDSLS-------CYD 76
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S S + ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N
Sbjct: 77 SEI---IKSGMTIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLTFLESIIDKLKLTN 133
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EE
Sbjct: 134 CTTLHGRAEDLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYIVALKGAIYEEE 192
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK S +A+ ++ A++ ++ +V + +R V K +TPK+YPR P PL
Sbjct: 193 VKESNKALSILKATIEEVRTVTLPTLEDKRAIVYIKKIGKTPKQYPRKPKEIKDKPL 249
>gi|104774705|ref|YP_619685.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123251759|sp|Q1G8A5.1|RSMG_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|103423786|emb|CAI98794.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 239
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 130/234 (55%), Gaps = 14/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHC 115
L+ Q++Q Y L++ N +NLT + D +EV +H DS L + P +
Sbjct: 17 LSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLLWPEV-------- 68
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
KL DVG GAG P L + I PD +VT+++S+ KR FL + + V +
Sbjct: 69 ---FAEGAKLCDVGAGAGFPSLPIKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPL +VGG F+A KG EE+++
Sbjct: 126 VHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELED 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A++ +G ++ + RT V+ K TP KYPR GTP + PL
Sbjct: 186 AKSALEKLGGEVVFTRVITLPGSTEVRTLVLVDKVEATPGKYPRQAGTPNRKPL 239
>gi|227534572|ref|ZP_03964621.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187821|gb|EEI67888.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 247
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 15 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 74
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 75 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 123
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 124 LTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 183
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 184 TPAELIAAKPAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 243
Query: 289 L 289
L
Sbjct: 244 L 244
>gi|169351490|ref|ZP_02868428.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
gi|169291712|gb|EDS73845.1| 16S rRNA methyltransferase GidB [Clostridium spiroforme DSM 1552]
Length = 233
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 124/231 (53%), Gaps = 14/231 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q EQ Y L++WN KMNLTA+ D V +H DS+ I + + S
Sbjct: 17 LSDKQIEQFDKYFKLLVEWNEKMNLTAITDEESVYLKHFYDSITIAFDFEFASQS----- 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+VDVG GAG P + L I PD KVT+++S+ KR FL H +L N + +
Sbjct: 72 ------IVDVGAGAGFPSIPLKIIYPDLKVTIVDSLTKRITFLNHLFGALELTNCKAISA 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K+ RE+ DV +ARAVA + IL E CLPLV+VGG F++ KG EE+ +++
Sbjct: 126 RAEEYAKEN--REKCDVVMARAVARLNILDELCLPLVKVGGYFLSLKGLKADEELNEAKK 183
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ ++G + + + R+ ++ K + TP KYPR K PL
Sbjct: 184 GIGILGGKVGSVNDFTLTND-NHRSNIIIKKVKATPNKYPRMFAKIKKQPL 233
>gi|448822561|ref|YP_007415723.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
plantarum ZJ316]
gi|448276058|gb|AGE40577.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
plantarum ZJ316]
Length = 244
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H L +Q Q LY L+ N++ NLT + EV +H DSL +P +++
Sbjct: 11 AQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRD 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
+ CD VG GAG P + L I P +VT+++S+NKR FL V
Sbjct: 71 QPLTICD-----------VGAGAGFPSIPLKIVFPQLQVTIVDSLNKRINFLNDLVQQLG 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L V+ RAET GK + RE YD+ ARAVA + +L+E CLPLV++GG +A K +
Sbjct: 120 LTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVKIGGQMIALKAAN 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+ E AVQ +G ++Q + R +V K + +PK+YPR PGTPAK P
Sbjct: 180 ARTETAEGTYAVQQLGGQIVQDEAFSLPVTADPRHIIVIDKKKPSPKRYPRKPGTPAKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|357039057|ref|ZP_09100852.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
gibsoniae DSM 7213]
gi|355358521|gb|EHG06287.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
gibsoniae DSM 7213]
Length = 238
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 131/225 (58%), Gaps = 12/225 (5%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
++ +Y L+ N++ NLT++ + E +H DSL T + + S S K
Sbjct: 26 DKFEIYYQMLINKNKEYNLTSIIEPVEAAVKHFIDSL----------TLYQEISSTSGAK 75
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
+VD+G+GAG PG+ L I D +TL++++ K+ F++ + L NV ++ RAE L
Sbjct: 76 IVDIGSGAGFPGIPLKIYKDDIDMTLIDAVGKKVSFMQQVIKNLNLQNVIAIQTRAEELA 135
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+ RE+Y+VA++RAVAE+R+L EY LPL++VGG+FVAAKG + Q E+ N++RA++++G
Sbjct: 136 S--TGRERYNVALSRAVAELRVLVEYALPLIQVGGIFVAAKGPNVQGEIINADRAIKILG 193
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+L + V R+ V K T KYPR G K PL
Sbjct: 194 GEILNIRYVSLPLSNEGRSIVTIKKIEHTLAKYPRRIGIAKKRPL 238
>gi|422344299|ref|ZP_16425225.1| 16S rRNA methyltransferase GidB [Selenomonas noxia F0398]
gi|355377210|gb|EHG24435.1| 16S rRNA methyltransferase GidB [Selenomonas noxia F0398]
Length = 240
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L Q EQ +Y L+ WN +MNLTA+ +V +HI DSL T++ +
Sbjct: 18 ALTAVQTEQFAVYNRLLVAWNERMNLTALTAPEDVAVKHIIDSL----------TAYDEK 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
L+DVGTGAGLPG+ LA+ P +VTL++++ KR FL A + +L NV+ +
Sbjct: 68 LFAPARTLIDVGTGAGLPGIPLAVYAPQIEVTLMDALGKRVKFLTEAAAAMELRNVRCIH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE + R +YD+AV+RAVA + +L EY LP VR GG +A KG E +
Sbjct: 128 ARAEEAARRPEHRARYDIAVSRAVARLPVLLEYTLPFVRTGGTLLALKGRAYAAEQAEGK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RA +++G + V R + K TPK YPR G P + PL
Sbjct: 188 RAAEILGGGAISARPVRLPGLDDVRAILAVTKECPTPKGYPRRAGLPERAPL 239
>gi|377830947|ref|ZP_09813937.1| methyltransferase GidB [Lactobacillus mucosae LM1]
gi|377555231|gb|EHT16920.1| methyltransferase GidB [Lactobacillus mucosae LM1]
Length = 241
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 13/239 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSY 111
H L +Q Q +Y + L+ N +NLTA+ D EV +H DSL A+ P +
Sbjct: 12 DHGIELTDQQMTQFAIYYEDLVATNEHVNLTAITDQKEVYLKHFYDSLTGALAEPRLQT- 70
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
L L D+G GAG P L L IA P K+T+++S+NKR FL V+ L
Sbjct: 71 ---------EALTLCDIGAGAGFPSLPLKIAFPQLKITIVDSLNKRIKFLADLVAKLGLT 121
Query: 172 NVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
+V ++ RAET K +RE +DV ARAVA + +L+E CLP +VGG F+A K +
Sbjct: 122 DVNLIHDRAETFSAKKSPYRESFDVVTARAVARLAVLSELCLPAAKVGGEFIAYKASAAK 181
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+E++ +AV+++G + + +R +V K TPKKYPR PG P K P+
Sbjct: 182 DELQKGGKAVKVLGGQVEHSTKLTLPGTDEERNLIVIEKVAATPKKYPRRPGLPNKQPI 240
>gi|312136218|ref|YP_004003556.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
gi|311776269|gb|ADQ05756.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
Length = 238
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 143/243 (58%), Gaps = 20/243 (8%)
Query: 54 SHFETLNTRQQEQIHL-YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
++ N +Q+ L Y++ +L+ N+ NLTA++D + +HI DSL+++ I+
Sbjct: 9 EYYRVKNPLVVKQLFLKYMNLVLKKNKLFNLTAIEDEEGFVIKHIADSLSLLKFIE---- 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ N +D+G+G G+PGLVL IA P V L +S K+C F+ A +
Sbjct: 65 ---EEDSGKNPVAIDIGSGFGVPGLVLKIAKPSITVFLNDSNRKKCNFMMEAKESLGIAG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+++ RAE LG+ FRE++D A ARAV ++ +L EY +PL+++GG+F+A KG+D ++E
Sbjct: 122 VEVICDRAENLGRKEVFRERFDFAFARAVDKLNVLCEYAIPLLKIGGVFLAQKGYDCEDE 181
Query: 233 VKNSERAVQLMGASLLQL------CSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAK 286
+N++ A+ ++GA +L++ CS E +R+ +V K R+TP +PR+ K
Sbjct: 182 CENAKEAIDVLGAEVLRIEKFVLPCSDE------KRSVIVIKKLRQTPSNFPRNTKQIVK 235
Query: 287 VPL 289
PL
Sbjct: 236 KPL 238
>gi|270290031|ref|ZP_06196257.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
gi|270281568|gb|EFA27400.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
Length = 243
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 9/233 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T++ Q Q Y L++ N +NLTA+ D EV +H DS+ + +T
Sbjct: 16 TVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTP---- 71
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L DVG GAG P L + I P+ KVT+++S+NKR FL+ V L +V++V
Sbjct: 72 ----GIALCDVGAGAGFPSLPMKILLPELKVTIVDSLNKRIKFLQALVDELGLTDVELVH 127
Query: 178 GRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G K ++R + + ARAVA + +L+E CLPLV+ GG F+A K ++E+
Sbjct: 128 DRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQGGHFIALKAAHTEQELAIG 187
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G LL+ +R VV K + TP KYPR PGTP+K P+
Sbjct: 188 RQAIAVLGGKLLEDRQFALPVTGDERHLVVIEKKKETPNKYPRKPGTPSKDPI 240
>gi|313124635|ref|YP_004034894.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281198|gb|ADQ61917.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 239
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAIIPPIKNSYTSHC 115
L+ Q++Q Y L++ N +NLT + D +EV +H DS L + P +
Sbjct: 17 LSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLLWPEV-------- 68
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
KL DVG GAG P L + I PD +VT+++S+ KR FL + + V +
Sbjct: 69 ---FAEGAKLCDVGAGAGFPSLPIKILRPDLEVTIVDSLGKRLNFLSDLLEKLGIEGVNL 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
V GRAE +G++ +RE++D+ ARAVA M +L+EYCLPL +VGG F+A KG EE+++
Sbjct: 126 VHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAKVGGKFLALKGPRADEELED 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A++ +G ++ + +R V+ K + TP KYPR GTP + PL
Sbjct: 186 AKSALEKLGGEVVFSRVITLPGSAEERILVLVDKVKATPGKYPRQAGTPNRKPL 239
>gi|295101871|emb|CBK99416.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
L2-6]
Length = 235
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 16/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +++ + + L+++N+K+NLTA+ D + ++H DSL + S + +
Sbjct: 18 LTGTQLDRLDAFAEILVEYNQKVNLTAITDPEGIEDKHFLDSLL--------FASQPEVA 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K+VDVG GAG PG+V I P+ ++TL+E KR FL++A L V+ +
Sbjct: 70 G----KMVDVGAGAGFPGIVTKIFKPELELTLMEPTGKRVEFLKYACGQLGLTGVEFAKE 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++REQ+D+A ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ +
Sbjct: 126 RAEEAARK-AWREQFDLASARAVAALPVLAEYCLPLVKVGGNFLAMKGASGEEELAAARG 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + ++ P G RT ++C K +TP YPR+ G AK PL
Sbjct: 185 AIKKLGGEYKETRTL--HLPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|160914902|ref|ZP_02077116.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
gi|158433442|gb|EDP11731.1| 16S rRNA methyltransferase GidB [Eubacterium dolichum DSM 3991]
Length = 236
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 15/231 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +QQ+Q Y L++WN+KMNLTA+ +++E+ E+H DSL +P S+ + S
Sbjct: 21 LNDQQQQQFDEYAQMLVEWNKKMNLTAITEIDEIYEKHFLDSL--LP----SFDMEINGS 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
DVG GAG P + L I P KVT++E++ KR FL L +V +V
Sbjct: 75 ------FCDVGAGAGFPSIPLKIVYPQLKVTIVETLGKRITFLNALCEKLGLKDVVLVHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE K+ RE +D+ ARAVA + +L+E C+PLV++ G F+A KG + EE +N++
Sbjct: 129 RAEDYAKE--HRESFDIVSARAVANLPMLSELCIPLVKLNGTFLALKGANGDEEYENAKH 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L Q ++ S +R K ++TPK YPR K PL
Sbjct: 187 AIEILGCRLAQR-DEKTLSDGSKRINFGFAKVKKTPKCYPRAFAKIKKNPL 236
>gi|169334514|ref|ZP_02861707.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
gi|169259231|gb|EDS73197.1| 16S rRNA methyltransferase GidB [Anaerofustis stercorihominis DSM
17244]
Length = 236
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 124/227 (54%), Gaps = 12/227 (5%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
+ E++ +++ +L+ N+K NLTA+ D E +E+HI DS + IKN
Sbjct: 22 KAEKLLKFMEIVLRENKKFNLTAITDEKEFIEKHIIDSAIAVKYIKNEG----------- 70
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
KL+D+G+GAG+PG+++ I D + LL+S+NKR +L + +L N++ + RAE
Sbjct: 71 -KLIDIGSGAGMPGIIIKILNDDMDILLLDSLNKRVNYLNETIKELELNNIEAIHARAEE 129
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
L D +RE +D ARAVA++ +L EY P ++ GG F+A KG EE++ S+ A+
Sbjct: 130 LSHDKDYRESFDYVTARAVAKLNVLTEYTTPFIKSGGKFIALKGSRGNEELEESKNAIGS 189
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ LL + +R +V K + T +YPR K PL
Sbjct: 190 LSCKLLDTHKINLPYSNAERDIIVIEKIKPTLDRYPRKQAKIKKSPL 236
>gi|392427884|ref|YP_006468878.1| 16S rRNA m(7)G-527 methyltransferase [Desulfosporosinus acidiphilus
SJ4]
gi|391357847|gb|AFM43546.1| 16S rRNA m(7)G-527 methyltransferase [Desulfosporosinus acidiphilus
SJ4]
Length = 239
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 144/259 (55%), Gaps = 26/259 (10%)
Query: 35 FCPHRTRAKTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVME 94
F + ++ K LT + L+ +Q ++ L+ D L++WNRK+NLT + + E++
Sbjct: 2 FKDYDSQMKVLTLAHLGYD-----LSEQQINKLCLFGDLLIEWNRKLNLTRITEPLEIIL 56
Query: 95 RHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESM 154
+H DS+ + IK + K D+GTGAG PG+ + I P+ V L++S+
Sbjct: 57 KHFIDSMVLGKYIKGT-------------KFADLGTGAGFPGIPIKILLPELDVYLIDSL 103
Query: 155 NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPL 214
KR FL+ +S L N + RAE +G+D +R ++D +RAVA + +L E+ LP+
Sbjct: 104 KKRLDFLDIVISELGLKNTWTIHARAEDIGRDAQYRAKFDSVGSRAVARLPVLLEFTLPI 163
Query: 215 VRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ----RTAVVCLKS 270
++ GLF++ KG ++E++ S+ A++++GA++ + Q FG+ R +V K
Sbjct: 164 LKKNGLFLSLKGLQAKDELEESKAALKVLGATVDSI----QQYSFGESAEHRAVIVIKKE 219
Query: 271 RRTPKKYPRDPGTPAKVPL 289
+ TP YPR G P+K P+
Sbjct: 220 KDTPSIYPRKAGIPSKSPI 238
>gi|160944277|ref|ZP_02091506.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
gi|158444459|gb|EDP21463.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
M21/2]
Length = 235
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q+ + L+ +N+K+NLTA+ D + ++H DSL + S + +
Sbjct: 18 LTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSLL--------FASQPEVA 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++VDVG GAG PG+V I P+ ++TL+E KR FL++A + L V+ +
Sbjct: 70 G----RMVDVGAGAGFPGIVTKIFKPELELTLMEPTGKRVEFLKYACAQLGLTGVEFAKE 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + V +REQ+D+A ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ +
Sbjct: 126 RAEEAARKV-WREQFDLASARAVAALPMLAEYCLPLVKVGGNFLAMKGASGEEELTAARG 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + ++ P G RT ++C K +TP YPR+ G AK PL
Sbjct: 185 AIKKLGGEYRETRTL--HLPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|434398817|ref|YP_007132821.1| 16S rRNA m(7)G-527 methyltransferase [Stanieria cyanosphaera PCC
7437]
gi|428269914|gb|AFZ35855.1| 16S rRNA m(7)G-527 methyltransferase [Stanieria cyanosphaera PCC
7437]
Length = 246
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 12/232 (5%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N RQQ+ +LQ NRK+NLT + E E+H+ DSLA S D
Sbjct: 25 NHRQQQYFVQIYQEILQGNRKLNLTRITSPEEFWEKHLWDSLA----------SLLDFPL 74
Query: 120 NSNLKL--VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++ LKL +D+GTG G PGL +A+ P W+VTLL+S K+ FL + + L NV+ +
Sbjct: 75 DTQLKLNVIDIGTGGGFPGLPMAVVFPHWQVTLLDSTRKKIAFLSNLATKIGLTNVKTLV 134
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE +G+ RE YD+A RAV + AEY LPLV++GGL + +GH ++ + E
Sbjct: 135 ARAEVIGQQAQHRETYDLATIRAVGTASVCAEYALPLVKLGGLAILYRGHWQAQDTEALE 194
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G+ + + ++ + R + K TPK+YPR G P + PL
Sbjct: 195 LVATELGSKIEAIAALTTPISHSIRHCIYLRKHSPTPKQYPRAVGVPNQQPL 246
>gi|365906028|ref|ZP_09443787.1| 16S rRNA methyltransferase GidB [Lactobacillus versmoldensis KCTC
3814]
Length = 175
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 107/170 (62%)
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+ +L + DVG+GAG P + L I PD +VT+++S+NKR FL+ V L NV +V GR
Sbjct: 3 HGSLSICDVGSGAGFPSIPLKIINPDLQVTIIDSLNKRINFLKGLVEKLDLDNVDLVHGR 62
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE LG++ +RE++D+ ARAVA M +L E CLP + GG F+A K E++ ++ A
Sbjct: 63 AEELGQNKQYREKFDLVTARAVASMTVLTELCLPFAQKGGQFIAMKADKADAELQEAKYA 122
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ L+G + Q S E + G R + K++ TPKKYPR PGTP++ PL
Sbjct: 123 IGLLGGKVSQQESFELPNEAGLRNLIFVSKTKETPKKYPRKPGTPSRKPL 172
>gi|421277146|ref|ZP_15727966.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SPAR10]
gi|395876427|gb|EJG87503.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SPAR10]
Length = 237
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
L +Q+ Q Y + L++WN+K+NLTA+ + EV +H DS+A PI
Sbjct: 16 NLTDQQKFQFERYFELLVEWNQKINLTAITEKEEVYLKHFYDSIA---PILQGLIE---- 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N +KL+D+G GAG P L + I P VT+++S+NKR FL+ L +
Sbjct: 69 --NQEIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAEELDLEGIHFYH 126
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE ++ +FR Q+D+ ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 127 GRAEDFAQEKNFRAQFDIVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELTEAK 186
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+ + + S P G R + K + TP KYPR G P K PL
Sbjct: 187 NALNLLFSKVEDNLSY--TLPNGDPRYITIVEKKKETPNKYPRKAGMPNKRPL 237
>gi|417927888|ref|ZP_12571276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|340765762|gb|EGR88288.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
Length = 239
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 11/217 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L T+Q+EQ Y L++WN K+NLTA+ + N+V +H DS+A PI + +
Sbjct: 17 LTTKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIA---PILQGFLA----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++L+D+G GAG P L + I P+ +VT+++S+NKR FL H L V G
Sbjct: 69 -NEPIRLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRIAFLTHLAESLALDKVHFFHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D FR Q+DV ARAVA M++LAE +P +++GG +A K +E+++++
Sbjct: 128 RAEDFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLKIGGRLIALKAQAADQELEDAKT 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPK 275
A+ L+ + + Q P + ++ +R P+
Sbjct: 188 ALSLLFGKV--TTNHHYQLPNEDARYITVVEKKRKPQ 222
>gi|325679062|ref|ZP_08158656.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
gi|324109186|gb|EGC03408.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
Length = 233
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q ++ Y + L + N +NLTA+ D + E+H DS I P +T
Sbjct: 14 LTAEQTGRLDKYAEMLCERNEHVNLTAITDPEGIAEKHFFDS--IYP-----FTLF---E 63
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVGTGAG P L + D +TLL+S+NKR FL+ +S L+ + V G
Sbjct: 64 LPQGASLIDVGTGAGFPSCPLKVFRDDISLTLLDSLNKRVNFLQ-GISDALSLDAKCVHG 122
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE GK +REQ+D+A ARAVA +R L EYCLP V+VGGLF A KG EE+ ++
Sbjct: 123 RAEEFGKKPDYREQFDIATARAVANLRDLCEYCLPFVKVGGLFAALKGSSGAEELDIAKP 182
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G ++ +E P G RT ++ K TP+K+PR+ G K PL
Sbjct: 183 AIKLLGGKTEKV--IEYTLPSGDGRTLILIRKLTATPEKFPRNAGQMKKKPL 232
>gi|295103708|emb|CBL01252.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
SL3/3]
Length = 235
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q+ + L+ +N+K+NLTA+ D + ++H DSL + S + +
Sbjct: 18 LTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSLL--------FASQPEVA 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++VDVG GAG PG+V I P+ ++TL+E KR FL++A + L V+ +
Sbjct: 70 G----RMVDVGAGAGFPGIVTKIFKPELELTLMEPTGKRVDFLKYACAQLGLTGVEFAKE 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + V +REQ+D+A ARAVA + +LAEYCLPLV+VGG F+A KG +EE+ +
Sbjct: 126 RAEEAARKV-WREQFDLASARAVAALPMLAEYCLPLVKVGGNFLAMKGASGEEELTAARG 184
Query: 239 AVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + ++ P G RT ++C K +TP YPR+ G AK PL
Sbjct: 185 AIKKLGGEYRETRTL--HLPGGDTRTLILCKKISQTPTAYPRNGGKIAKSPL 234
>gi|342218843|ref|ZP_08711446.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 135-E]
gi|341588790|gb|EGS32165.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 135-E]
Length = 237
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 129/232 (55%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L +Q Q L+ +AL++ N+ MNLTA+ +V +HI DSL + + +
Sbjct: 16 SLTEKQITQYTLFFEALVETNKVMNLTALTSSTDVAWKHIADSL----------SCYDER 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ K++D+G+GAG PG+ L I PD ++T +S+ KR F+E + + +
Sbjct: 66 YFLGHKKVLDLGSGAGFPGVPLFIYNPDLEITFFDSLQKRLYFIESVIQRLSEQQLTYLH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + +RE +D+ +RAVA + ILAE+CLP V+ GG +A KG + E+K ++
Sbjct: 126 GRAEDMAHQEGYREAFDIVTSRAVARLPILAEWCLPYVKKGGYMIALKGAQYEVEIKEAQ 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A++++G + ++ V+ +R + K PKKYPR P AK PL
Sbjct: 186 KAIEILGGMIEEVRPVQLGQFADKRAIIYIRKIASAPKKYPRKPKVAAKNPL 237
>gi|291531939|emb|CBK97524.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum 70/3]
Length = 232
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 136/235 (57%), Gaps = 17/235 (7%)
Query: 55 HFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
+ E + + + LY + L+++N+ +NLTA+ D EV+ +H DS ++P S
Sbjct: 15 NIELSQDKADKLLKLY-EFLVEYNQNVNLTAITDFEEVVVKHFIDS--VLP------FSM 65
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
D NS+ +DVGTGAG P + L I PD K TLLE++NKRCVFLE A LT ++ +
Sbjct: 66 IDIKENSSF--IDVGTGAGFPSIPLMIVRPDLKGTLLEALNKRCVFLEKACELTG-VDAK 122
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
+V GRAE K+ RE +D A ARAVA M +L EYC+P V+ GG F+A K + E +
Sbjct: 123 VVHGRAEDYAKEK--REAFDFATARAVAAMPVLCEYCIPYVKTGGRFIALKSVNEDETL- 179
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E+AV ++G + ++ + +R ++ K +TP KYPR+P K PL
Sbjct: 180 -CEKAVNVLGGKIAKIKDYTITNGDNRRLFIID-KVSQTPTKYPRNPSMIKKKPL 232
>gi|309792061|ref|ZP_07686535.1| methyltransferase GidB [Oscillochloris trichoides DG-6]
gi|308225868|gb|EFO79622.1| methyltransferase GidB [Oscillochloris trichoides DG6]
Length = 238
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 16/234 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
LN Q +Q+ Y L +WN ++NLT + D+ E+ RH DSL S +
Sbjct: 19 NLNPTQLDQLAHYAQLLREWNERINLTTITDLGEIYRRHFLDSL--------SLARFWGT 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S LVD+G+GAG PGLVL I P+ ++TL+ES+ K+ F+ H L V+++
Sbjct: 71 GPQS---LVDIGSGAGFPGLVLKILRPELRLTLVESVGKKAEFMRHVARELNLYAVRVLD 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE +G++ + R ++D+ ARAVAE+R+L EY LPL+++ G +AAKG EV +E
Sbjct: 128 VRAEDVGRNAAERAKHDLVTARAVAELRVLVEYALPLLQMHGRLLAAKGPAVYSEVAAAE 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPK--KYPRDPGTPAKVPL 289
A++++G ++ + VE GQ VV L + P +YPR G P + PL
Sbjct: 188 HALRVLGGKVVGIEPVELP---GQDAHVVVLVEKINPTDPRYPRAAGVPTRKPL 238
>gi|116493781|ref|YP_805515.1| 16S rRNA methyltransferase GidB [Lactobacillus casei ATCC 334]
gi|417988498|ref|ZP_12629033.1| rRNA small subunit methyltransferase [Lactobacillus casei A2-362]
gi|417994891|ref|ZP_12635201.1| rRNA small subunit methyltransferase [Lactobacillus casei M36]
gi|417998121|ref|ZP_12638351.1| rRNA small subunit methyltransferase [Lactobacillus casei T71499]
gi|418000898|ref|ZP_12641070.1| rRNA small subunit methyltransferase [Lactobacillus casei UCD174]
gi|418014149|ref|ZP_12653761.1| rRNA small subunit methyltransferase [Lactobacillus casei Lpc-37]
gi|122264764|sp|Q03CJ9.1|RSMG_LACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103931|gb|ABJ69073.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus casei ATCC 334]
gi|410539621|gb|EKQ14148.1| rRNA small subunit methyltransferase [Lactobacillus casei M36]
gi|410541428|gb|EKQ15908.1| rRNA small subunit methyltransferase [Lactobacillus casei A2-362]
gi|410541909|gb|EKQ16375.1| rRNA small subunit methyltransferase [Lactobacillus casei T71499]
gi|410549116|gb|EKQ23292.1| rRNA small subunit methyltransferase [Lactobacillus casei UCD174]
gi|410554478|gb|EKQ28453.1| rRNA small subunit methyltransferase [Lactobacillus casei Lpc-37]
Length = 243
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAE G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAEAFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|227543811|ref|ZP_03973860.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|338203602|ref|YP_004649747.1| glucose inhibited division protein B [Lactobacillus reuteri SD2112]
gi|227186188|gb|EEI66259.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|336448842|gb|AEI57457.1| glucose inhibited division protein B [Lactobacillus reuteri SD2112]
Length = 241
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNS 110
+ H TL+ Q +Q Y L++ N +NLT + + +EV +H DS+ A P S
Sbjct: 11 ADHGITLSAEQMQQFADYYQLLVETNEHVNLTRITEKDEVYLKHFYDSITGAFAEPRLES 70
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
L L D+G GAG P L L IA P KVT+++S+NKR FLE V+ L
Sbjct: 71 ----------EELTLCDIGAGAGFPSLPLKIAFPQLKVTIVDSLNKRIAFLEALVAKLGL 120
Query: 171 LNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
+V ++ RAET K+ +RE++D+ ARAVA + +L+E CLP ++ G F+A K
Sbjct: 121 TDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLPAAKISGEFIAYKASAA 180
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
EE++ A++ +G + + ++ +R +V K + TP KYPR PG P+K P+
Sbjct: 181 PEELQQGGAAIKQLGGKVQKTVTLTLLETDEERNIIVIDKIKATPNKYPRRPGLPSKKPI 240
>gi|374998016|ref|YP_004973515.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus orientis DSM 765]
gi|357216382|gb|AET71000.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus orientis DSM 765]
Length = 239
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 21/235 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q Y D LL+WN+K+NLT + + +V+ +H DS+ + + Y D
Sbjct: 21 LTDLQINQFCKYGDLLLEWNQKLNLTRIIEPEDVILKHFIDSMVL-----SKYMYGVD-- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
D+GTGAG PG+ L I P+ KV L++S+ KR FL+ + L + V
Sbjct: 74 ------FADLGTGAGFPGVPLKILRPELKVVLVDSLKKRLDFLDVVIETLSLTEIHTVHT 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +R +++ +RAVA + IL EY LP++++ GLF+AAKG + E+ +SE+
Sbjct: 128 RAEDFGRDSKYRGRFETVSSRAVARLPILLEYALPVLKINGLFLAAKGIQAENEMADSEK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G C G+ R ++ K ++TP +YPR G P+K P+
Sbjct: 188 AIKILGGK----CEGREHYNLGEGAEHRAIILIRKIKQTPAQYPRKAGIPSKKPI 238
>gi|428204089|ref|YP_007082678.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pleurocapsa
sp. PCC 7327]
gi|427981521|gb|AFY79121.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Pleurocapsa
sp. PCC 7327]
Length = 249
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 132/232 (56%), Gaps = 8/232 (3%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
N +QQEQ + ++ NR+ NLT + + E E+H+ DSLA + N +
Sbjct: 24 NKKQQEQFQKLYEEIIIGNRQFNLTRITEPREFWEKHLWDSLAGL----NGLGIANELEA 79
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
L ++D+GTGAG PG+ +AIA P W VTLL+S K+ VFL ++ L N+Q + GR
Sbjct: 80 GQPLYVIDIGTGAGFPGIPIAIALPFWIVTLLDSTRKKMVFLSGLITKLDLKNIQTLIGR 139
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE +G++ R+ YD+A+ RAV E + AEY LPL+++GGL + +GH +++ + + A
Sbjct: 140 AEEIGQNPLHRQAYDLALIRAVGEATVCAEYALPLLKIGGLAILYRGHWDEKDNLSLQLA 199
Query: 240 VQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +G + ++ E +P Q R + K TP ++PR G P + PL
Sbjct: 200 AEKLGGKIERVT--EFVTPLSQSIRHCIYLRKMLSTPPQFPRAIGIPVQKPL 249
>gi|302872908|ref|YP_003841544.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
gi|302575767|gb|ADL43558.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
Length = 238
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 131/220 (59%), Gaps = 7/220 (3%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
+++ +L+ N+ NLTA++D E + +HI DSL++I ++ + N N +D+G
Sbjct: 26 FMNFVLEKNKLFNLTAIEDEEEFVLKHIADSLSLIKFVE-------EECSNQNPVAIDIG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
+G G PG+ + IA P+ + L +S K+C F+ AV + + +V +V RAE LGK F
Sbjct: 79 SGFGAPGIFIKIAMPNMNMFLNDSNKKKCNFMTEAVKMLGISSVNVVCERAEVLGKKEEF 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE++D ARAV + +L EY LPL++ GG+F+A KG++ ++E+ ++ AV+L+G + +
Sbjct: 139 RERFDFVFARAVDSLNVLCEYALPLLKTGGVFLAQKGYECEDEINSASNAVELLGGKIYR 198
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +R+ V+ K R+TP +PR+ K PL
Sbjct: 199 VEKFVLPFSDEKRSIVMIKKIRQTPSNFPRNTKQIIKKPL 238
>gi|418009726|ref|ZP_12649515.1| rRNA small subunit methyltransferase [Lactobacillus casei Lc-10]
gi|410555176|gb|EKQ29137.1| rRNA small subunit methyltransferase [Lactobacillus casei Lc-10]
Length = 243
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+ +++S+ KR FLE + +
Sbjct: 71 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKIIIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET G K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|417000108|ref|ZP_11940462.1| ribosomal RNA small subunit methyltransferase G [Veillonella
parvula ACS-068-V-Sch12]
gi|333976354|gb|EGL77223.1| ribosomal RNA small subunit methyltransferase G [Veillonella
parvula ACS-068-V-Sch12]
Length = 250
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 134/237 (56%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQ-EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
SHF T +Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y
Sbjct: 24 SHFGLPCTEEQAKDFYMYYAHMIETNKYLNLTGITDMKEVVVKHMIDSLS-------CYD 76
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S S + ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N
Sbjct: 77 SEI---IKSGMTIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLTFLESIIDKLKLTN 133
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EE
Sbjct: 134 CTTLHGRAEDLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVVALKGAIYEEE 192
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK S +A+ + A++ ++ +V + +R + K+ +TPK+YPR P PL
Sbjct: 193 VKESNKALSTLKATIEEVRTVTLPTLDDKRAILYMKKTGKTPKQYPRKPKEIKDKPL 249
>gi|418006959|ref|ZP_12646858.1| rRNA small subunit methyltransferase [Lactobacillus casei UW4]
gi|410550243|gb|EKQ24377.1| rRNA small subunit methyltransferase [Lactobacillus casei UW4]
Length = 243
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKN 109
+ H LN QQ+Q Y L+ N KMNLT + +V +H DSL ++P ++
Sbjct: 11 ADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQT 70
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
S CD VG GAG P + L IA P K+T+++S+ KR FLE + +
Sbjct: 71 QVMSVCD-----------VGAGAGFPSIPLKIAFPQLKITIVDSLQKRIGFLERLTARLE 119
Query: 170 LLNVQIVRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228
L +VQ+ RAET K R +D+ ARAVA + +LAE CLPLV+ G FVA K
Sbjct: 120 LTDVQLFHDRAETFVAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQGRFVAMKAAA 179
Query: 229 PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
E+ ++ A+ L+G L Q ++ R +V K + TP KYPR PG P K P
Sbjct: 180 TPAELIAAKSAIGLLGGKLAQDAALTLPETGDPRHLLVIDKVKPTPNKYPRKPGIPNKQP 239
Query: 289 L 289
L
Sbjct: 240 L 240
>gi|227529772|ref|ZP_03959821.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
gi|227350256|gb|EEJ40547.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
Length = 253
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 124/232 (53%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q +Q Y D L+ N +NLT + + EV +H DS++ + T
Sbjct: 29 LSDAQMKQFAEYYDLLVATNEHVNLTRITEKKEVYLKHFFDSISGVFAEPKLMTDE---- 84
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L L D+G GAG P + + IA P KVT+++S+NKR +FL+ V L +V +V
Sbjct: 85 ----LTLCDIGAGAGFPSIPIKIAFPQLKVTIVDSLNKRIIFLQELVDQLGLSDVTLVHD 140
Query: 179 RAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET K REQYD+ ARAVA + +L+E CLP +VGG F+A K EE++
Sbjct: 141 RAETFSAKRSDHREQYDIVTARAVARLAVLSELCLPAAKVGGEFIAYKASAAPEEIQQGG 200
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + + +E +R VV K TPKK+PR PG P K P+
Sbjct: 201 TAIKKLGGQIRKTVKLELPGTDEERNIVVIDKVAATPKKFPRRPGLPNKKPI 252
>gi|300812283|ref|ZP_07092719.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496703|gb|EFK31789.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 239
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 136/245 (55%), Gaps = 15/245 (6%)
Query: 48 TRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDS---LAII 104
T ++ +F+ L+ Q++Q Y L++ N +NLT + D +EV +H DS L +
Sbjct: 7 TETLSKYNFK-LSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLLW 65
Query: 105 PPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHA 164
P + KL DVG GAG P L + I PD +VT+++S+ KR FL
Sbjct: 66 PEV-----------FAEGAKLCDVGAGAGFPSLPIKILRPDLEVTIVDSLGKRLNFLSDL 114
Query: 165 VSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224
+ + V +V GRAE +G++ +RE++D+ ARAVA M +L+EYCL L +VGG F+A
Sbjct: 115 LEKLGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLSLAKVGGKFLAL 174
Query: 225 KGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTP 284
KG EE+++++ A++ +G + + +RT V+ K + TP KYPR GTP
Sbjct: 175 KGPRADEELEDAKSALEKLGGKAVFSRVITLPGSAEERTLVLVDKVKATPGKYPRQAGTP 234
Query: 285 AKVPL 289
+ PL
Sbjct: 235 NRKPL 239
>gi|205371921|ref|ZP_03224741.1| glucose-inhibited division protein B [Bacillus coahuilensis m4-4]
Length = 224
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 122/219 (55%), Gaps = 10/219 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ RQ EQ Y L++WN KMNLTA+ D EV +H DS+ S + D
Sbjct: 16 SLSPRQLEQFEQYFSILVEWNEKMNLTAITDREEVYLKHFFDSI--------SAAFYYDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S +L + DVG GAG P + L I P KV++++S+NKR FL + L +V
Sbjct: 68 S--KDLHICDVGAGAGFPSIPLKICFPHIKVSIVDSLNKRIQFLNFLGNELGLEHVYFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G++ RE+YDV ARAVA + +L+E CLPL +VGG FVA K +E+ ++
Sbjct: 126 DRAETFGQNSDHREKYDVVTARAVARLSVLSELCLPLAKVGGQFVAMKAASAADELTTAK 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKK 276
+A++ G L + S +R+ +V K +TPKK
Sbjct: 186 KAMKTCGGELKETHSFLLPEENSERSIIVVEKRAKTPKK 224
>gi|300087974|ref|YP_003758496.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527707|gb|ADJ26175.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q + Y + L++WN NLT++ + +V +H DS+++I S D S
Sbjct: 19 LSESQSTKFQRYFEQLIEWNGYFNLTSITENEQVQTKHFLDSMSLII----SGLEFEDKS 74
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L+DVG+GAG PG+ L I P K+TLLE+ +K+C FLEH ++ +L V++
Sbjct: 75 ------LLDVGSGAGFPGIPLKILFPSLKLTLLEASSKKCHFLEHVTNILELNEVKVCNE 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE FRE +D+ ARA+A + +L E CLP +GG FVA K Q E+ ++
Sbjct: 129 RAEVQAHQPEFRENFDLVAARALASLDVLVELCLPFCAIGGHFVAMKSGSEQ-ELHDAGN 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ MG + Q V R ++ K RTP KYPR PG P K P+
Sbjct: 188 SLATMGGKISQDIEVNLPGISETRHLIIIDKISRTPAKYPRRPGIPRKRPV 238
>gi|289450644|ref|YP_003475557.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185191|gb|ADC91616.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 263
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 124/221 (56%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN ++++ Y L++ NR MNLTA+ + +V +H DSL ++P +KN ++ +
Sbjct: 35 LNPEAKDKLKKYGIELIKTNRMMNLTALTEPIDVAVKHFADSLTLLPLLKNEFSKFASAH 94
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ +DVGTGAG PGL + +++LL+S+ KR FL + + NV+ +
Sbjct: 95 AADQYRWIDVGTGAGFPGLPVQALASIGELSLLDSLKKRLAFLNDLAGILSVDNVRYIHA 154
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +RE Y +AVARAVA + IL E CLPLV+ GG FVA KG + E+ +
Sbjct: 155 RAEDAGRDKKYREHYSLAVARAVAPLPILCELCLPLVKQGGCFVAMKGPAAEVEMTEIKT 214
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 279
++ +GA + E +R ++ K + TP K+PR
Sbjct: 215 EIRELGAETEAIRKFELPLTHDERCLIIFRKKQPTPAKFPR 255
>gi|227432682|ref|ZP_03914655.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351564|gb|EEJ41817.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 136/233 (58%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL T+Q Q Y + L+ N +NLTA+ + +V +H DSL + Y S
Sbjct: 16 TLTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVA-----MYEQKLKS 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S ++ L+D+GTGAG P L L IA PD K+T+++++ KR FL+ V L V+IV
Sbjct: 71 SEST---LIDIGTGAGFPSLPLKIAFPDLKITMVDALKKRVNFLQEVVDTLDLTGVEIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++ +RE +D A ARAVA +LAEY LP V++GG F+ KG +E+ + +
Sbjct: 128 GRAEDIGQNPKYRENFDYATARAVARTSVLAEYTLPFVKIGGRFLVMKGSAAYQELLDGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G + + + P G QR + K +TPKKYPR GTP+K P+
Sbjct: 188 KALAMLGGQVNEEFVF--KLPNGDQRYIQIVDKKTKTPKKYPRQAGTPSKKPI 238
>gi|332639018|ref|ZP_08417881.1| 16S rRNA methyltransferase GidB [Weissella cibaria KACC 11862]
Length = 239
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 132/241 (54%), Gaps = 18/241 (7%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNS 110
H LN +Q Q Y + L+ N MNLTA+ + +EV +H DSL + P ++
Sbjct: 12 EHNVELNAQQLAQYQQYYERLVAVNEHMNLTAITERDEVYMKHFYDSLTLAWAYPALQTE 71
Query: 111 YTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170
L ++DVG GAG P L L IA P ++T+++++NKR FL V L
Sbjct: 72 -----------ELHMIDVGAGAGFPSLPLKIAFPQLQITIIDALNKRINFLRDLVKELGL 120
Query: 171 LNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
V + RAE G K+ REQYDVA ARA+A + IL E LP V+VGG+ +A KG
Sbjct: 121 EGVTVEHARAEEFGNKNAPAREQYDVATARALARLNILGELTLPFVKVGGVLLAMKGSAA 180
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVP 288
EE++ +++A+ +GA + ++ P G R+ +V K + TPKKYPR PG P + P
Sbjct: 181 DEELQEAKKAITTLGAKIGD--QIDVSLPNGDPRSVIVIEKVKNTPKKYPRKPGDPVRKP 238
Query: 289 L 289
L
Sbjct: 239 L 239
>gi|411120175|ref|ZP_11392551.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710331|gb|EKQ67842.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoriales
cyanobacterium JSC-12]
Length = 255
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 57 ETLN----TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL-AIIPPIKNSY 111
ETLN Q + +L NR NLT + D E E+H+ DSL I ++NS
Sbjct: 21 ETLNWHPSLHQTQSFQTLYRHILDANRYFNLTRITDSTEFSEKHLWDSLRGIATVLRNS- 79
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
S + K++D+GTGAG PG+ +AIA P W VTLL+S K+ FL ++ L
Sbjct: 80 ----TSPLPAPFKVIDIGTGAGFPGIPIAIAQPTWTVTLLDSTRKKIDFLNQLLATLSLS 135
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
N + GRAE LG+D REQY++AV RAVA + AEY LP +++GG V +G
Sbjct: 136 NATALVGRAEELGRDPLHREQYNLAVIRAVAAAPVCAEYALPFLQIGGTAVLYRGQWTDA 195
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + E+AV+++G ++ + + ++ G+R + K ++ YPR G PA+ PL
Sbjct: 196 DTQLLEKAVKMLGGTIAAIEAFKTPISQGERHCIYLCKIAQSSPDYPRATGIPAQKPL 253
>gi|303234724|ref|ZP_07321352.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
gi|302494207|gb|EFL53985.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
Length = 230
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 130/231 (56%), Gaps = 14/231 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q + + Y+D +L+ N+ MNLTA+ + +H DSL ++ N +
Sbjct: 14 LDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVL----NLF------D 63
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N ++DVGTGAG P + + IA D K TLL+S+ KR FL+ + L ++ V
Sbjct: 64 FEENKTIIDVGTGAGFPAIPIKIARNDLKFTLLDSLRKRVDFLKDVIDELHLTEIKAVHE 123
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + +RE+YD ++RAV+++ LAE+CLP V+VGG +A KG + +V E
Sbjct: 124 RAEECTRTAEYRERYDYCISRAVSKLDTLAEFCLPFVKVGGYMIAMKGKSDETDV--GEN 181
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + Q +++ + R+ VV K + TPKKYPR G P K PL
Sbjct: 182 AIKILGGKIEQ--TIDYKIDDEDRSLVVIKKIKETPKKYPRGGGKPKKNPL 230
>gi|212697396|ref|ZP_03305524.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325846390|ref|ZP_08169359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|212675588|gb|EEB35195.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325481574|gb|EGC84614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 130/225 (57%), Gaps = 17/225 (7%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
++ Y L++ N+K NLT + + +++ +H +DSL I S N +K
Sbjct: 2 DKFEKYGQMLIETNKKFNLTTIDEPDQIKIKHFEDSLTI------------KSYINEGMK 49
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++D+G+GAG PG+ L I D+ +TL++S+NK+ F+ + L N + + RAE
Sbjct: 50 VLDIGSGAGFPGIPLRIE-KDFDLTLIDSVNKKVNFMNQVIEELDLKNTRAIHVRAEDFA 108
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
K+ RE++D+ ++RAVA + L+EY LP ++VGG+F+A KG +EE ++++ A++++G
Sbjct: 109 KE--HREEFDMVISRAVANLSTLSEYALPFLKVGGIFIAMKGPKAEEEYEDAKNALKILG 166
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ + S++ R ++ K R T KKYPR P K PL
Sbjct: 167 GELINIDSMDLHG--NTRKNILIKKVRSTKKKYPRGKNLPKKNPL 209
>gi|20809123|ref|NP_624294.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter tengcongensis
MB4]
gi|254479393|ref|ZP_05092726.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
gi|22095716|sp|Q8R6L0.1|RSMG_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|20517803|gb|AAM25898.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Thermoanaerobacter
tengcongensis MB4]
gi|214034662|gb|EEB75403.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
Length = 239
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 122/224 (54%), Gaps = 15/224 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL E + LL+WN+KMNLTA+ + EV+ +H DSL++I
Sbjct: 19 TLEMFHVEHFQKFYSLLLEWNQKMNLTAITEEEEVVIKHFLDSLSVIK----------SG 68
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
K++D+GTGAG PG+ L I P+ +TLLE+ K+ FL + ++++
Sbjct: 69 KIKGGEKVIDIGTGAGFPGIPLKIVFPEIGLTLLEASKKKVNFLNFLSQVLLFEGIEVIH 128
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE LGK FRE++D+A ARAVA + IL EY +P VRVGG F+A KG D EEV +
Sbjct: 129 GRAEELGKVERFREKFDIATARAVAPLNILLEYAVPFVRVGGHFIAMKGRDI-EEVYQCK 187
Query: 238 RAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPR 279
A++ + + + +E + PF +V K P KYPR
Sbjct: 188 NALEELKCEIEDV--IEVRLPFSDILHHLIVVKKVDVLPSKYPR 229
>gi|348025755|ref|YP_004765560.1| ribosomal RNA small subunit methyltransferase G [Megasphaera
elsdenii DSM 20460]
gi|341821809|emb|CCC72733.1| ribosomal RNA small subunit methyltransferase G [Megasphaera
elsdenii DSM 20460]
Length = 236
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+++ Q Q + +AL++ N+ MNLTA+ D V +H+ DSL+ P +
Sbjct: 16 SVSESQLAQFCTFDEALVETNKVMNLTAITDPKGVAIKHMADSLSCYDP----------A 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PGL L I PD KVT +S+ KR FLE V L +
Sbjct: 66 YFKDGASVLDLGTGAGFPGLPLLIYRPDLKVTFFDSLQKRLTFLEKVVCDLGL-TASFLH 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + +R +D+ +RAVA + ILAE+ LP VR GG F++ KG +EE+ E
Sbjct: 125 GRAEEMAHKPEYRSAFDIVTSRAVARLNILAEWALPYVRTGGYFISLKGAQYEEELAEGE 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+Q++G + ++ V R + K + +PKKYPR P AK PL
Sbjct: 185 KALQILGGKVAEVRPVRLPGLDDVRAVLYIEKVKESPKKYPRKPKMAAKNPL 236
>gi|116617470|ref|YP_817841.1| 16S rRNA methyltransferase GidB [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381335946|ref|YP_005173721.1| 16S rRNA methyltransferase GidB [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122272329|sp|Q03ZA4.1|RSMG_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116096317|gb|ABJ61468.1| 16S rRNA m(7)G-527 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|356643912|gb|AET29755.1| 16S rRNA methyltransferase GidB [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 239
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 135/233 (57%), Gaps = 11/233 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL T+Q Q Y + L+ N +NLTA+ + +V +H DSL + Y S
Sbjct: 16 TLTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVA-----MYEQKLKS 70
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S ++ L+D+GTGAG P L L IA PD K+T+++++ KR FL+ V L V+IV
Sbjct: 71 SEST---LIDIGTGAGFPSLPLKIAFPDLKITMVDALKKRVNFLQEVVDTLDLTGVEIVH 127
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G++ +RE +D A ARAVA +LAEY LP V++GG F+ KG +E+ + +
Sbjct: 128 GRAEDIGQNPKYRENFDYATARAVARTSVLAEYTLPFVKIGGRFLVMKGSAAHQELLDGQ 187
Query: 238 RAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++G + + P G QR + K +TPKKYPR GTP+K P+
Sbjct: 188 KALAMLGGQVNEEFVF--TLPNGDQRYIQIVDKKTKTPKKYPRQAGTPSKKPI 238
>gi|357014896|ref|ZP_09079895.1| RsmG [Paenibacillus elgii B69]
Length = 240
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 124/234 (52%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHC 115
L Q Q LY L++WN +MNLT + + +V +H DSL++ IP H
Sbjct: 19 LTEAQLHQFELYYRELVEWNERMNLTGITEREQVYVKHFYDSLSVSFFIP------MEHI 72
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
S + D+G+GAG P + L I P VT+++S+NKR FL H + L +V+
Sbjct: 73 RS-------VADIGSGAGFPSIPLKIVYPHLHVTIVDSLNKRIQFLTHLGNTLGLTDVRF 125
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
+ GRAE + + R++YD+A ARAVA + +L E+CLP V+ GG F A KG + Q E++
Sbjct: 126 IHGRAEDVARMPEHRDRYDLATARAVARLAVLNEFCLPFVKTGGRFSAMKGQEVQAELEE 185
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +++ + + R + K+ TPKKYPR GTP K PL
Sbjct: 186 AALSLKELKGKWNHTYRFQLPLEESTRHIIDIEKTALTPKKYPRKAGTPLKTPL 239
>gi|294792405|ref|ZP_06757552.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
gi|294456304|gb|EFG24667.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
Length = 244
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 11/228 (4%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
Q + +++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y S S
Sbjct: 27 EQAKDLYMYYAHMIETNKYLNLTGIIDMKEVVVKHMIDSLS-------CYDSEI---IKS 76
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
+ ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N + GRAE
Sbjct: 77 GMTIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLTFLESVIDKLKLTNCTTLHGRAE 136
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EEVK S +A+
Sbjct: 137 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYIVALKGAIYEEEVKESNKALS 195
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A++ ++ +V + +R + K+ +TPK+YPR P PL
Sbjct: 196 TLKATIEEVRTVTLPTLDDKRAILYMKKTGKTPKQYPRKPKEIKDKPL 243
>gi|238926482|ref|ZP_04658242.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
gi|238885676|gb|EEQ49314.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
Length = 240
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 122/231 (52%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y + LL WN +MNLTA+ +V +HI DSL T++ +
Sbjct: 19 LTAEQVGQFSVYNEMLLDWNTRMNLTALTAPEDVAVKHIIDSL----------TAYDAAL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L+DVGTGAGLPG+ LA+ P VTLL+S+NKR FL + L NV+ +
Sbjct: 69 FDGARTLIDVGTGAGLPGIPLAVYAPHLTVTLLDSLNKRVRFLMEVTAAMGLPNVRCIHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + R YD+AV+RAVA + +L EY LP VR+GG +A KG E K + R
Sbjct: 129 RAEEAARTAEHRAAYDIAVSRAVARLPVLLEYALPFVRIGGTLLALKGRAYAAEQKEARR 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A +++G + V R + K R+TP YPR G P + P+
Sbjct: 189 AAEVLGGGRITARPVRLPGLDDVRAMLTVTKERQTPAAYPRGGGAPTRRPI 239
>gi|81427630|ref|YP_394627.1| 16S rRNA methyltransferase GidB [Lactobacillus sakei subsp. sakei
23K]
gi|123564972|sp|Q38ZR1.1|RSMG_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78609269|emb|CAI54316.1| Methyltransferase GidB (Glucose Inhibited Cell Division protein B)
[Lactobacillus sakei subsp. sakei 23K]
Length = 246
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 126/232 (54%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ +Q +Q +Y + L+ N+ +NLTA+ + V +H DS+A T + +S
Sbjct: 17 VSQKQLDQFEIYFERLVATNQNVNLTAITEKEAVYLKHFFDSVAP--------TLYLESL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
L + D+G GAG P L + I P KVT+++S+NKR FLE V+ L +V +V
Sbjct: 69 RTMPLNICDIGAGAGFPSLPMKILFPQLKVTIVDSLNKRIHFLEELVAELGLTDVTLVHD 128
Query: 179 RAETLGK-DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE + +REQ+D+ ARAVA M +LAE+CLP V+VGG FVA K E+ +
Sbjct: 129 RAELFSQVKRPYREQFDMVTARAVAPMNVLAEFCLPAVKVGGQFVALKASQSDTELAEAA 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G L + + R V+ K + TP KYPR G P K PL
Sbjct: 189 FAIETLGGQLKEDIAFNLPETNDPRHLVIIDKVQSTPDKYPRRAGVPVKKPL 240
>gi|443329064|ref|ZP_21057654.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Xenococcus sp.
PCC 7305]
gi|442791339|gb|ELS00836.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Xenococcus sp.
PCC 7305]
Length = 254
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 3/228 (1%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
RQ Q +A++ NRK NLT + + E+H+ DSL + + T + +S
Sbjct: 30 RQLTQFQKLYEAIIIGNRKHNLTRITTPEDFWEKHLWDSLLGVAILN---TEDKLAIPDS 86
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
+++D+GTGAG PGL +AIA PDWK+TL++S +K+ F+E ++ L N+ + RAE
Sbjct: 87 PRQVIDIGTGAGFPGLPVAIANPDWKLTLVDSTHKKIAFVEKTIAQLGLKNLYALVERAE 146
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
T+G+D +RE YD+A+ RAV + + AEY LPLV+VGGL + +GH +E+ N E AV
Sbjct: 147 TIGRDPHYRESYDLALIRAVGKPSVCAEYILPLVKVGGLAILYRGHWEEEDTFNLESAVS 206
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G+ + + + ++ R + K KYPR G P + PL
Sbjct: 207 ELGSKIELIHAQKTPITESIRHCIYLRKHSPIAHKYPRAVGVPNQKPL 254
>gi|304438031|ref|ZP_07397975.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368985|gb|EFM22666.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 240
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 122/231 (52%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y + LL WN +MNLTA+ +V+ +HI DSL ++ +
Sbjct: 19 LTAEQIGQFSVYHEMLLDWNTRMNLTALTAPEDVVVKHIIDSL----------MAYDAAR 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L+DVGTGAGLPG+ LA+ P VTLL+S+NKR FL + L NV+ +
Sbjct: 69 FDGARTLIDVGTGAGLPGIPLAVYAPHLTVTLLDSLNKRVRFLTEVTAAMGLQNVRCIHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + R YD+AV+RAVA + +L EY LP VRVGG +A KG E K + R
Sbjct: 129 RAEEAARTAEHRAAYDIAVSRAVARLPVLLEYTLPFVRVGGTLLALKGRAYAAEQKEARR 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A +++G + V R + K R+TP YPR G P + P+
Sbjct: 189 AAEVLGGGRIMARPVHLPGLDDVRVVLTVTKERQTPTAYPRGGGAPTRRPI 239
>gi|160946573|ref|ZP_02093776.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
gi|158446957|gb|EDP23952.1| 16S rRNA methyltransferase GidB [Parvimonas micra ATCC 33270]
Length = 244
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ +Y +L+WN K+NLTA+ D + +H D L + + T D +
Sbjct: 28 EKFEIYRKLILEWNEKINLTAITDEEAMNTKHFLDCLLL------TKTGLFDDDKS---- 77
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L + + KVT+L+S+NKR FL + L N++ + GRAE +G
Sbjct: 78 ILDVGTGAGFPAIPLKLYNENLKVTMLDSLNKRIKFLNIVIEDLNLKNIKAIHGRAEEVG 137
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+ FRE +D+ +RAVA + +L E+ +P ++V GLF+A KG EEV++S+ A++ +
Sbjct: 138 RKEGFRESFDIVSSRAVASLSLLLEFTIPFLKVNGLFLAMKGPSYLEEVEDSKNALKKLN 197
Query: 245 ASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L ++ + +E +R ++ K+ +TP +PR+ G K PL
Sbjct: 198 CKLEKVLNFKIELNGEISERNILIIKKTGKTPDNFPRNMGQIKKKPL 244
>gi|354807115|ref|ZP_09040590.1| 16S rRNA methyltransferase GidB [Lactobacillus curvatus CRL 705]
gi|354514378|gb|EHE86350.1| 16S rRNA methyltransferase GidB [Lactobacillus curvatus CRL 705]
Length = 246
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 122/228 (53%), Gaps = 9/228 (3%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
Q +Q LY L+Q N+++NLTA+ + V +H DS+ + T + +
Sbjct: 21 QMDQFELYFKRLVQVNQQVNLTAITEQEAVYLKHFFDSV--------TPTLYLEKLRTEP 72
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
L + D+G GAG P L + I P K+T+++S+NKR FLE V L +V +V RAE
Sbjct: 73 LTICDIGAGAGFPSLPIKILFPQLKITIVDSLNKRIHFLEELVRELGLSDVTLVHDRAEL 132
Query: 183 LGKDVS-FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
S +REQ+D+ ARAVA + +L E+CLP V+VGG F+A K + E+ + A++
Sbjct: 133 FSNPKSPYREQFDIVTARAVASLNVLVEFCLPTVKVGGQFIALKASQGETELAEANYAIE 192
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G Q ++ QR +V K TP KYPR G P K PL
Sbjct: 193 TLGGQFAQDIALTLPETDDQRHLIVIDKVVPTPAKYPRRAGVPVKKPL 240
>gi|323342285|ref|ZP_08082517.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|336066912|ref|YP_004561770.1| ribosomal RNA small subunit methyltransferase G [Erysipelothrix
rhusiopathiae str. Fujisawa]
gi|322463397|gb|EFY08591.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|334296858|dbj|BAK32729.1| ribosomal RNA small subunit methyltransferase G [Erysipelothrix
rhusiopathiae str. Fujisawa]
Length = 238
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 126/234 (53%), Gaps = 21/234 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
++ ++Q Y + + + N+ +NLT + D + +H DSL I P IK
Sbjct: 17 VSEEMKQQFLTYKNLIQEVNKVLNLTGIDDDEGIFLKHFYDSLLISPLIK---------- 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N + D+G+GAG PG+VLAIA PD VT +E KR FLE V L N ++ G
Sbjct: 67 --ENSSIADIGSGAGFPGIVLAIARPDVTVTCIEPTTKRTNFLERVVQECGLKNTIVLNG 124
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + ++ RE +DVA ARAVA + IL+E CLP V+VGG+F+A KG EE ++S +
Sbjct: 125 RAEDVIGEL--RESFDVATARAVAYLDILSELCLPFVKVGGVFLAMKGTKGIEEYEDSLK 182
Query: 239 AVQLMGASLLQ---LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G L+Q C G R + K + KKYPR K PL
Sbjct: 183 AIKILGGELIQTHKFC----DDIMGDRYNLEIKKVKSASKKYPRSYAKIKKTPL 232
>gi|345859447|ref|ZP_08811797.1| methyltransferase GidB [Desulfosporosinus sp. OT]
gi|344327594|gb|EGW39022.1| methyltransferase GidB [Desulfosporosinus sp. OT]
Length = 246
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 124/231 (53%), Gaps = 13/231 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q+ + D LL WNR++NLT + D +EV+ +H DS+ + S
Sbjct: 21 LSDLQISQLCQFGDLLLDWNRRLNLTRITDPHEVILKHFIDSMVL-------------SK 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
S + D+GTGAG PG+ L I P+ + L++S+ KR FL+ + L + V
Sbjct: 68 YISGVSFADIGTGAGFPGIPLKIIRPELTIVLMDSLKKRLNFLDFVIKDLNLHEINTVHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+DV +R +D +RAVA + +L EY LP++++ GL +A KG +E+ S++
Sbjct: 128 RAENFGQDVQYRNCFDNVSSRAVARLPVLLEYTLPVLKINGLLLAPKGSQVDDELAESQK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++L+G + + R V+ K + TP +YPR G P K P+
Sbjct: 188 ALKLLGGVVESVEHFSLGEGAEHRAVVLIRKVKETPIQYPRQAGIPTKDPI 238
>gi|22537769|ref|NP_688620.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae 2603V/R]
gi|76799422|ref|ZP_00781572.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
gi|29336666|sp|Q8DY64.1|RSMG_STRA5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22534661|gb|AAN00493.1|AE014266_4 glucose-inhibited division protein B [Streptococcus agalactiae
2603V/R]
gi|76585231|gb|EAO61839.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
Length = 237
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 134/237 (56%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H TL +Q++Q Y L++WN K+NLTA+ D EV +H DS+A PI Y
Sbjct: 12 EHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGYID 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
NS L ++D+G GAG P + + I P+ +T+++S+NKR FL + +L V
Sbjct: 69 ------NSPLSILDIGAGAGFPSIPMKILYPEIDITIIDSLNKRINFLNILANELELSGV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
GRAE G+D FR ++D+ ARAVA+M++LAE +P ++V G +A K +EE+
Sbjct: 123 HFFHGRAEDFGQDRVFRAKFDIVTARAVAKMQVLAELTIPFLKVNGRLIALKAAAAEEEL 182
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++E+A++ + + + + + P G R + K + TP KYPR GTP K PL
Sbjct: 183 ISAEKALKTLFSQV--TVNKNYKLPNGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|77405787|ref|ZP_00782871.1| methyltransferase GidB [Streptococcus agalactiae H36B]
gi|77175574|gb|EAO78359.1| methyltransferase GidB [Streptococcus agalactiae H36B]
Length = 237
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H TL +Q++Q Y L++WN K+NLTA+ D EV +H DS+A PI Y
Sbjct: 12 EHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGYID 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
NS L ++D+G GAG P + + I P+ +T+++S+NKR FL + +L V
Sbjct: 69 ------NSPLSILDIGAGAGFPSIPMKILYPEIDITIIDSLNKRINFLNILANKLELSGV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
GRAE G+D FR ++D+ ARAVA M++LAE +P ++V G +A K +EE+
Sbjct: 123 HFFHGRAEDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLKVNGRLIALKAAAAEEEL 182
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++E+A++ + + + + + P G R + K + TP KYPR GTP K PL
Sbjct: 183 ISAEKALKTLFSQV--TVNKNYKLPNGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|383765180|ref|YP_005444161.1| ribosomal RNA small subunit methyltransferase G [Phycisphaera
mikurensis NBRC 102666]
gi|381385448|dbj|BAM02264.1| ribosomal RNA small subunit methyltransferase G [Phycisphaera
mikurensis NBRC 102666]
Length = 244
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 126/225 (56%), Gaps = 4/225 (1%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E + Y+ LL+ N++MNLTAV++ + R + D+L +P + + +
Sbjct: 24 ETLDAYLHRLLEVNQRMNLTAVREHDAAWLRLLVDALTALPGLPGAGADAGELPTG---- 79
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVG+G GLPG+ LAI PD TLLE+ K+ FLE + L NV ++ RAET G
Sbjct: 80 VIDVGSGGGLPGIPLAITRPDLSFTLLEATGKKARFLEETAAALGLANVAVLNARAETAG 139
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+D + RE+Y +AV+RAV M ++ E LPLV VGG + KG ++E+++S A+ +G
Sbjct: 140 RDPALRERYGLAVSRAVGPMPVILELTLPLVAVGGRSLCMKGPRAEQELRDSGEALHRLG 199
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A + + + V +K+ TPKKYPR PG P PL
Sbjct: 200 AGEVAVFDAYPEGFGNDLVVVSVVKASATPKKYPRAPGMPKAEPL 244
>gi|25011716|ref|NP_736111.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae NEM316]
gi|77408471|ref|ZP_00785209.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|77411914|ref|ZP_00788245.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77414723|ref|ZP_00790853.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|410595008|ref|YP_006951735.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
agalactiae SA20-06]
gi|421148053|ref|ZP_15607725.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae GB00112]
gi|421532152|ref|ZP_15978521.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
STIR-CD-17]
gi|29336669|sp|Q8E3T0.1|RSMG_STRA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24413256|emb|CAD47335.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159230|gb|EAO70411.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|77162011|gb|EAO72991.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77172913|gb|EAO76044.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|401685391|gb|EJS81399.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae GB00112]
gi|403642660|gb|EJZ03486.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
STIR-CD-17]
gi|410518647|gb|AFV72791.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
agalactiae SA20-06]
Length = 237
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H TL +Q++Q Y L++WN K+NLTA+ D EV +H DS+A PI Y
Sbjct: 12 EHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGYID 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
NS L ++D+G GAG P + + I P+ +T+++S+NKR FL + +L V
Sbjct: 69 ------NSPLSILDIGAGAGFPSIPMKILYPEIDITIIDSLNKRINFLNILANELELSGV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
GRAE G+D FR ++D+ ARAVA M++LAE +P ++V G +A K +EE+
Sbjct: 123 HFFHGRAEDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLKVNGRLIALKAAAAEEEL 182
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++E+A++ + + + + + P G R + K + TP KYPR GTP K PL
Sbjct: 183 ISAEKALKTLFSQV--TVNKNYKLPNGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|257059962|ref|YP_003137850.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
gi|256590128|gb|ACV01015.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
Length = 240
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 136/233 (58%), Gaps = 13/233 (5%)
Query: 60 NTRQQEQI-HLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N QQ+Q LY + +L NR++NLT + + N+ E+H+ DSLA I I+ +
Sbjct: 18 NPSQQKQWDKLYHEIILA-NRQINLTRITEPNDFWEKHLWDSLAGILDIE-------IIN 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+LK++D+GTGAG PG+ + I CP+W+VTL +S K+ F++ + L N + G
Sbjct: 70 LEQSLKVIDIGTGAGFPGIPIGIVCPNWQVTLFDSTRKKINFIKILLEELSLKNCHTLIG 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+++S RE YD+A+ RAV E + AEY LPL++ GG+ V +G+ EE +
Sbjct: 130 RAEEIGQNLSHRESYDLALIRAVGEASVCAEYTLPLLKTGGMAVLYRGNWTDEEELKLKS 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + + + Q+P Q R + K +TP ++PR G P + PL
Sbjct: 190 AIKQLGGKIALIRKL--QTPLTQSIRHFIYLEKIAKTPLQFPRSIGVPNQYPL 240
>gi|312868952|ref|ZP_07729132.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|417885053|ref|ZP_12529213.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus oris
F0423]
gi|311095516|gb|EFQ53780.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|341596642|gb|EGS39236.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus oris
F0423]
Length = 240
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 126/234 (53%), Gaps = 13/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCD 116
L RQ +Q Y L+ NR++NLT + + N+V +H DSL A P +
Sbjct: 17 LTDRQMQQFADYYQLLVTTNRQVNLTRITEENDVYLKHFYDSLTGAFAEPRLQT------ 70
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
L L D+G GAG P L L IA P +VT+++S+NKR FL+ V+ L V +V
Sbjct: 71 ----EQLPLCDIGAGAGFPSLPLKIAFPQLQVTIVDSLNKRINFLQELVAKLGLSGVTLV 126
Query: 177 RGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
RAET K + RE+YD+ +ARAVA + +LAE CLP RVGG VA K +E+ +
Sbjct: 127 HDRAETFSAKKAANREKYDLVLARAVARLSVLAELCLPAARVGGELVAYKASAADDELAD 186
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A+ +G + + ++ QR ++ K TP KYPR PG P K PL
Sbjct: 187 AQGAISKLGGKVQKEFAMTLPGTADQRKIIIIDKVTATPPKYPRRPGLPNKKPL 240
>gi|76787171|ref|YP_330246.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae A909]
gi|406710010|ref|YP_006764736.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
GD201008-001]
gi|424048924|ref|ZP_17786475.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae ZQ0910]
gi|123601392|sp|Q3JZQ7.1|RSMG_STRA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76562228|gb|ABA44812.1| glucose-inhibited division protein B [Streptococcus agalactiae
A909]
gi|389649693|gb|EIM71169.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae ZQ0910]
gi|406650895|gb|AFS46296.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae
GD201008-001]
Length = 237
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H TL +Q++Q Y L++WN K+NLTA+ D EV +H DS+A PI Y
Sbjct: 12 EHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGYID 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
NS L ++D+G GAG P + + I P+ +T+++S+NKR FL + +L V
Sbjct: 69 ------NSPLSILDIGAGAGFPSIPMKILYPEIDITIIDSLNKRINFLNILANELELSGV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
GRAE G+D FR ++D+ ARAVA M++LAE +P ++V G +A K +EE+
Sbjct: 123 HFFHGRAEDFGQDRVFRAKFDIVTARAVARMQVLAELTIPFLKVNGRLIALKAAAAEEEL 182
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++E+A++ + + + + + P G R + K + TP KYPR GTP K PL
Sbjct: 183 ISAEKALKTLFSQV--TVNKNYKLPNGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|408790338|ref|ZP_11201964.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus florum 2F]
gi|408520389|gb|EKK20442.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactobacillus florum 2F]
Length = 241
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q +Q Y L+ +N+K+NLT + VN+V +H DS+ + I T
Sbjct: 17 LSDQQAQQFADYFQLLVAYNQKVNLTTITAVNDVYLKHFYDSITPLFFISKLRTGQS--- 73
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
LVDVG GAG P + + I P KVT+++S+ KR FL + + +VQ+V
Sbjct: 74 -----TLVDVGAGAGFPSIPMKIMNPKLKVTIVDSLQKRLTFLAQLLESLGIDDVQLVHA 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G + + RE++D A ARA+A + +++E CLPLV+ G +A KG Q+E+ ++
Sbjct: 129 RAEDFGGRTGAGRERFDFATARALARLSVMSELCLPLVKPAGQLIALKGAHAQQELADAT 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+QL+G ++ S QR +V K ++TP KYPR G PAK L
Sbjct: 189 TALQLLGGAVANDFSFSLPKTNEQRHIIVIDKVKKTPVKYPRQAGIPAKQAL 240
>gi|238018232|ref|ZP_04598658.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
gi|237864703|gb|EEP65993.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
Length = 250
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQ-EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S F L T +Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y
Sbjct: 24 SQFGLLCTEEQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLS-------CYD 76
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
H S + ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + QL N
Sbjct: 77 PHI---IKSGMSIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLTFLESIMDELQLTN 133
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE L +RE +D+A +RAVA + IL E+ +P V+ GG +A KG +EE
Sbjct: 134 CTTLHGRAEDLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVIALKGAIYEEE 192
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
V S +A+ + A + ++ +V + +R + K+ +TPK+YPR P PL
Sbjct: 193 VGESNKALSTLKAKIEEVRTVTLPTLDDKRAILYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|331700959|ref|YP_004397918.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
gi|329128302|gb|AEB72855.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
Length = 245
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 122/232 (52%), Gaps = 15/232 (6%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSS 118
+Q +Q Y L+ N +NLT++ + EV +H DS+ + IK + S CD
Sbjct: 20 QQMDQFDAYFKLLVAVNEHVNLTSITEKPEVYLKHFYDSITPAFFVSQIKTAPLSICD-- 77
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
VG GAG P L L I P KVT+++S+NKR FL V L V++
Sbjct: 78 ---------VGAGAGFPSLPLKILFPQLKVTIVDSLNKRINFLTTLVKELNLTGVELFHA 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G K REQYD+ ARAVA + +L+E CLPL +VGG VA K + E+ +++
Sbjct: 129 RAEEFGGKRSEHREQYDLVTARAVARLTVLSELCLPLAKVGGKMVALKAAKAEGELSDAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+QL+G + +R +V K + TPKKYPR PGTP + PL
Sbjct: 189 PAIQLLGGKVSGDFEFSLPVSDEERHVIVIDKVKETPKKYPRKPGTPNREPL 240
>gi|303228589|ref|ZP_07315416.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
gi|302516768|gb|EFL58683.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
Length = 249
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 11/228 (4%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
+Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ P + S
Sbjct: 33 QQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDP----------TIIKS 82
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
++DVGTGAG PG+ LAI VTL +S+ KR FLE + QL N + + GRAE
Sbjct: 83 GSSIIDVGTGAGFPGIPLAIYDRTLHVTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAE 142
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
L +RE +D+A +RAVA + IL E+ +P V+ GG +A KG +EEV S++A+
Sbjct: 143 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDKALS 201
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ AS+ + +V + +R V K+ +TPK+YPR P PL
Sbjct: 202 TLKASIEDVRTVTLPTLDDKRAIVYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|406026453|ref|YP_006725285.1| 16S rRNA (guanine527-N7)-methyltransferase [Lactobacillus buchneri
CD034]
gi|405124942|gb|AFR99702.1| 16S rRNA (guanine527-N7)-methyltransferase [Lactobacillus buchneri
CD034]
Length = 245
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 121/232 (52%), Gaps = 15/232 (6%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSS 118
+Q +Q Y L+ N +NLT + + EV +H DS+ + IK + S CD
Sbjct: 20 QQMDQFDAYFKLLVAVNEHVNLTTITEKPEVYLKHFYDSITPAFFVSQIKTAPLSICD-- 77
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
VG GAG P L L I P KVT+++S+NKR FL V L V++
Sbjct: 78 ---------VGAGAGFPSLPLKILFPQLKVTIVDSLNKRINFLTTLVKELNLTGVELFHA 128
Query: 179 RAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE G K REQYD+ ARAVA + +L+E CLPL +VGG VA K + E+ +++
Sbjct: 129 RAEEFGGKKSEHREQYDLVTARAVARLTVLSELCLPLAKVGGKMVALKAAKAEGELSDAQ 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+QL+G + +R +V K + TPKKYPR PGTP + PL
Sbjct: 189 PAIQLLGGQVSGDFEFSLPVSDEERHIIVIDKVKETPKKYPRKPGTPNREPL 240
>gi|227500995|ref|ZP_03931044.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
gi|227216768|gb|EEI82166.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
Length = 210
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 128/222 (57%), Gaps = 17/222 (7%)
Query: 68 HLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVD 127
+Y+D LL+ N NLTA+ + E+ +H DSL ++ SY D K++D
Sbjct: 6 QIYMDYLLEVNAHTNLTAITNPREIEIKHFKDSLTVL-----SYIKEKD-------KVLD 53
Query: 128 VGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187
+G GAG PGL L I D+ +TL++S+NK+ VF+ + L N + + RAE ++
Sbjct: 54 IGAGAGFPGLPLRIE-KDFDLTLIDSVNKKVVFMNEVIEKLGLKNTRAIHTRAEDYAREK 112
Query: 188 SFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 247
RE +DV V+RAVA M L+EY LP +++GGLF+A KG +EE++ S+ A++++G +
Sbjct: 113 --RESFDVVVSRAVANMATLSEYALPFLKIGGLFIALKGPKAEEELEASKNALKILGGRV 170
Query: 248 LQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ + + +R +V K ++T KYPR P K PL
Sbjct: 171 KEIKAFDLDG--NERVNIVIEKVKKTKDKYPRGKNLPKKEPL 210
>gi|452992123|emb|CCQ96441.1| Ribosomal RNA small subunit methyltransferase G [Clostridium
ultunense Esp]
Length = 236
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TLN R+ Q Y + L+ WN ++NLTA+ D V E+H DSL +P +
Sbjct: 15 TLNERKVGQFRRYYEMLVLWNERINLTAITDEEGVYEKHFYDSL--MPTFFTPF------ 66
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N ++ D+G+GAG P + + I P +V +++S+ KR FLE V L V+++
Sbjct: 67 --NQVHRIADIGSGAGFPSIPIKIIFPHLQVVVVDSLKKRITFLEELVKELGLDRVELIH 124
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE +G+ +RE + + +ARAVA + IL E+ LP V VGG F+A KG ++E+K+S
Sbjct: 125 GRAEEVGRKPYYRESFPIVLARAVARLNILLEFTLPFVEVGGYFIAMKGKSGEQELKDSM 184
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++ ++ ++ +R + K P KYPR+ G K PL
Sbjct: 185 NALKVLRGTVDKIEKGTLPIEKSERILLWIKKEGSIPDKYPRNGGKIEKKPL 236
>gi|428213500|ref|YP_007086644.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoria acuminata PCC
6304]
gi|428001881|gb|AFY82724.1| 16S rRNA m(7)G-527 methyltransferase [Oscillatoria acuminata PCC
6304]
Length = 268
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 72 DALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH-------------CDSS 118
+ +L+ N+ +NLT + +E E+H+ DSL I P+ + C
Sbjct: 37 EGILEGNQALNLTRITTPDEFWEKHLWDSLRAITPLLSQPLGSPSESVSSSKMGMVCSEG 96
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +++ +D+GTGAG PGL +AIACP+W+VTLL+S K+ FL+ ++ + N + + G
Sbjct: 97 GNGSVRAIDIGTGAGFPGLPVAIACPEWQVTLLDSTRKKITFLQSLINQLGMENARAIVG 156
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
R E +G+ RE+YD A ARA+ + AEY LPL++VGGL + +GH EE +
Sbjct: 157 RVEEIGRSREHRERYDFAFARAIGPTMVCAEYALPLLKVGGLAILYRGHWTDEEAQVVSA 216
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+ +G + + + RT V K T ++PR G PA+ PL
Sbjct: 217 AVEQLGGMVDFVEKFTTPLTDSVRTCVYLRKVAPTRPEFPRAVGIPAQNPL 267
>gi|256848571|ref|ZP_05554012.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
gi|256714623|gb|EEU29603.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
Length = 242
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHC 115
L Q Q Y L+ N+ +NLT + D +V +H DS+ +P ++ S C
Sbjct: 17 LTDHQMNQFAQYYQDLVATNQVVNLTRITDEKDVYLKHFYDSITGSFALPALRTESLSLC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D +G GAG P L L IA P KVT+++S+NKR FL+ V+ L NV +
Sbjct: 77 D-----------IGAGAGFPSLPLKIAFPQLKVTIVDSLNKRINFLQELVARLNLDNVTL 125
Query: 176 VRGRAETLGKDVS-FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V RAE K S RE YDV ARAVA + +L+E CLP +VGG+F+A K +E+
Sbjct: 126 VHSRAEDFSKKGSAHRENYDVVTARAVARLSVLSELCLPAAKVGGIFLAYKAQAAADELT 185
Query: 235 NSERAVQLMGASLLQLCSVE--SQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ RA+ +G + S+E ++ +R ++ K TP++YPR GTPAK PL
Sbjct: 186 SATRAIAKLGGQKRNVYSLELPTKPEPEERNLLIIDKLTATPQQYPRRAGTPAKKPL 242
>gi|377556789|ref|ZP_09786472.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gastricus PS3]
gi|376167400|gb|EHS86240.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
gastricus PS3]
Length = 253
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 128/237 (54%), Gaps = 16/237 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHC 115
T+ +Q Q Y L++ N +NLTA+ D EV +H DS+ AI P +
Sbjct: 24 TVTDQQLAQFDYYYHFLVETNEHVNLTAITDREEVYLKHFYDSILGAIAQPKLQT----- 78
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
L D+G GAG P L L I P KVT+++S+NKR FL+ L V +
Sbjct: 79 -----EAWTLCDIGAGAGFPSLPLKILFPQLKVTIVDSLNKRIKFLQDLCDQLGLTEVTL 133
Query: 176 VRGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
V RAET K+ +REQYD+ ARAVA + +L+E CLP V+VGG F+A K Q+E++
Sbjct: 134 VHDRAETFSAKNSPYREQYDLVTARAVARLVVLSELCLPAVKVGGQFMAYKATAAQDELQ 193
Query: 235 NSERAVQLMGASL--LQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A +G L ++ S+ SQ P +R V+ K TP KYPR PG P K PL
Sbjct: 194 VAQGATNKLGGQLTDVKTLSLPSQ-PAEERNFVLINKVAATPGKYPRRPGVPNKKPL 249
>gi|390629302|ref|ZP_10257298.1| Ribosomal RNA small subunit methyltransferase G [Weissella confusa
LBAE C39-2]
gi|390485504|emb|CCF29646.1| Ribosomal RNA small subunit methyltransferase G [Weissella confusa
LBAE C39-2]
Length = 239
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 128/238 (53%), Gaps = 12/238 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H LN +Q Q Y + L+ N MNLTA+ + +EV +H DSL + T
Sbjct: 12 EHNVELNAQQLAQYQQYYERLVAVNEHMNLTAITERDEVYLKHFYDSLTLAWAYPELQTE 71
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
L ++DVG GAG P L L IA P ++T+++++NKR FL V L V
Sbjct: 72 E--------LHMIDVGAGAGFPSLPLKIAFPQLQITIIDALNKRINFLRDLVKELGLEGV 123
Query: 174 QIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ RAE G K REQYDVA ARA+A + +L E LP V+VGG+ +A KG EE
Sbjct: 124 TVEHARAEEFGNKTAPAREQYDVATARALARLNVLGELTLPFVKVGGVLLAMKGSAADEE 183
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +++A+ +GA + ++ P G R+ +V K + TPKKYPR PG P + PL
Sbjct: 184 LAEAKKAITTLGAEIGD--QIDVSLPNGDPRSVIVIKKVKNTPKKYPRKPGDPVRKPL 239
>gi|294794211|ref|ZP_06759347.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
gi|294454541|gb|EFG22914.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
Length = 239
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQ-EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
SHF T +Q + +LY +++ N+ +NLT + D+ EV+ +H+ DSL+ Y
Sbjct: 13 SHFGLPCTEEQAKDFYLYYVHMIETNKYLNLTGITDMKEVVIKHMIDSLS-------CYN 65
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S + ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + +L N
Sbjct: 66 SEI---IKFGMSIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLNFLESVIDELKLTN 122
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE L +RE +D+A +RAVA + IL E+ +P V+ GG VA KG +EE
Sbjct: 123 CTTLHGRAEDLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVVALKGAIYEEE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
VK S +A+ + A++ ++ +V + +R V K +TPK+YPR P PL
Sbjct: 182 VKESNKALSTLKATIEEVRTVALPTLEDKRAIVYIKKIGKTPKQYPRKPKEIKDKPL 238
>gi|83319743|ref|YP_424755.1| 16S rRNA methyltransferase GidB [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|3122152|sp|Q48960.1|RSMG_MYCCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|950065|emb|CAA83698.1| methyltransferases [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283629|gb|ABC01561.1| methyltransferase gidB [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 231
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 130/230 (56%), Gaps = 16/230 (6%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
+N +F T+N + +++LY L++ N+K NLT + ++NEV E+H DSL + +
Sbjct: 8 FLNYKNF-TINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQ- 65
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
D K+ D+GTGAG PG+VL I P+ K+TL+ES NK+ FL++ V
Sbjct: 66 ----IIDQ------KIADIGTGAGFPGIVLKIFFPNIKLTLIESNNKKVNFLKYLVQKLN 115
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L +V+I+ RAE L ++EQ+D+ ++RAVA + I+ E + LV+V G+F+ KG
Sbjct: 116 LNDVEILNKRAEELN---EYKEQFDIVISRAVAYLNIILELGVQLVKVNGMFILLKGPKA 172
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 279
+E+K+ + Q M L+ + +E + FG R + K T YPR
Sbjct: 173 YQEIKDLKNKDQKMNLKLINIQELED-TGFGTRINLFYKKINHTNNLYPR 221
>gi|303230681|ref|ZP_07317431.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
gi|302514736|gb|EFL56728.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
Length = 250
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 12/235 (5%)
Query: 56 FETLNTRQQ-EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSH 114
F L T+QQ + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y S
Sbjct: 26 FGLLCTQQQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLS-------CYDSK 78
Query: 115 CDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
S +S ++DVGTGAG PG+ LAI VTL +S+ KR FLE + QL N +
Sbjct: 79 IIKSGSS---IIDVGTGAGFPGIPLAIYDRTLHVTLFDSLKKRLTFLETVIDELQLTNCK 135
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
+ GRAE L +RE +D+A +RAVA + IL E+ +P V+ GG +A KG +EEV
Sbjct: 136 TLHGRAEDLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKQGGYVIALKGAIYEEEVG 194
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ A+ + AS+ + +V + +R V K+ +TPK+YPR P PL
Sbjct: 195 ESDEALSTLKASIEDVRTVNLPTLDDKRAIVYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|331703898|ref|YP_004400585.1| methyltransferase GidB [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802453|emb|CBW54608.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 231
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 16/230 (6%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
+N +F T+N + +++LY L+Q N+K NLT + +NEV E+H DSL + +
Sbjct: 8 FLNYKNF-TINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQ- 65
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
D K+ D+GTGAG PG+VL I P+ K+TL+ES NK+ FL++ V +
Sbjct: 66 ----IIDQ------KIADIGTGAGFPGVVLKIFFPNIKLTLIESNNKKANFLKYLVQKLE 115
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L +V+I+ RAE L + ++EQ+D+ ++RAVA + I+ E + LV+V G+F+ KG
Sbjct: 116 LNDVEILNKRAEELNQ---YKEQFDIVISRAVAYLDIILELGVQLVKVDGMFILLKGPKA 172
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 279
+E+K+ + Q M L+ + +E + FG R + K T YPR
Sbjct: 173 HQEIKDLKNKDQKMNLKLINIQELED-TGFGTRVNLFYKKINHTNNLYPR 221
>gi|333980897|ref|YP_004518842.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333824378|gb|AEG17041.1| Ribosomal RNA small subunit methyltransferase G [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 239
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 10/225 (4%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ Y L++WN K NLT++ + +V +H DSL T + +
Sbjct: 25 ERFFRYYRLLIEWNEKFNLTSLVEPRDVAIKHFIDSL----------TCLLVHNPAGGAR 74
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
VD+GTGAG PGL + I D TL+ES K+ FL + +V++V GRAE L
Sbjct: 75 FVDIGTGAGFPGLPVKIVREDLLCTLIESTGKKVSFLRQVAGALDMADVEVVCGRAEELA 134
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+R +D+A+ARAVA + +L EY LP ++ GG F+A KG QEE+ S A+ ++G
Sbjct: 135 HQARYRASFDLALARAVAPLPVLLEYALPFLKTGGYFIALKGPAVQEELPASGNALNVLG 194
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ ++ +V +R V+ K+ TP+KYPR PG P + PL
Sbjct: 195 GNVKEIMTVFLPVTGDERKLVLIEKTGPTPEKYPRRPGVPQRRPL 239
>gi|242092572|ref|XP_002436776.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
gi|241914999|gb|EER88143.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
Length = 190
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS- 121
QQ Q+ +YVD LL+WN++MNLTAV D EVM RH+ DSLA++PP++ +Y S+ S
Sbjct: 57 QQRQVTIYVDTLLEWNQRMNLTAVTDEAEVMTRHVADSLAMLPPLERAYRGRSTSAGGSI 116
Query: 122 -NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA 180
+ L+DVG+GAGLPGL+LA+A P WK TLLESM KRC FLEHAV +L NV +V R
Sbjct: 117 DGVSLIDVGSGAGLPGLILAVARPSWKFTLLESMRKRCTFLEHAVEAMELSNVNVVCDRD 176
Query: 181 ETLGK 185
L K
Sbjct: 177 RKLAK 181
>gi|218246901|ref|YP_002372272.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
gi|218167379|gb|ACK66116.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
Length = 240
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 135/233 (57%), Gaps = 13/233 (5%)
Query: 60 NTRQQEQI-HLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
N QQ+Q LY + +L NR++NLT + + N+ E+H+ DSLA I I+ +
Sbjct: 18 NPSQQKQWDKLYHEIILA-NRQINLTRITEPNDFWEKHLWDSLAGILDIE-------IIN 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+LK++D+GTGAG PG+ + I CP+W+VTL +S K+ F++ + L N + G
Sbjct: 70 LEQSLKVIDIGTGAGFPGIPIGIVCPNWQVTLFDSTRKKINFIKILLEELSLKNCHTLIG 129
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G++ S RE YD+A+ RAV E + AEY LPL++ GG+ V +G+ EE +
Sbjct: 130 RAEEIGQNPSHRESYDLALIRAVGEASVCAEYTLPLLKTGGMAVLYRGNWTDEEELKLKS 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++ +G + + + Q+P Q R + K +TP ++PR G P + PL
Sbjct: 190 AIKQLGGKIALIRKL--QTPLTQSIRHFIYLEKIAKTPLQFPRSIGVPNQYPL 240
>gi|282900470|ref|ZP_06308419.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194663|gb|EFA69611.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
Length = 249
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 126/237 (53%), Gaps = 9/237 (3%)
Query: 57 ETLN----TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
ETLN Q Q+ D ++ NR++NLT + + E E+H+ DSL + P
Sbjct: 18 ETLNWQPTIEQGNQLQKLYDLIVLANRQINLTRITEPKEFWEKHLWDSLRGVAP-----Q 72
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
H N+ ++D+G+GAG PGL + I P ++VTLL+S K+ F+ A+ L N
Sbjct: 73 QHFLPELNAAGSIIDIGSGAGFPGLPIGIVFPHYQVTLLDSTRKKVNFINSAIEKLPLSN 132
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE +G+D +RE+Y++AV RAVA I +EY LPL++ GGL + +G QEE
Sbjct: 133 ATTILGRAEEIGQDTPYREKYNLAVIRAVASASICSEYALPLIKKGGLAIIYRGTWTQEE 192
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+N E ++GA + + + R V K TP +PR G P + PL
Sbjct: 193 NQNLEHTANILGARIELIERFTTPLTKSVRHCVYLRKVLHTPISFPRPVGVPTQNPL 249
>gi|313887693|ref|ZP_07821375.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846302|gb|EFR33681.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 230
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 134/232 (57%), Gaps = 13/232 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+T+ ++ Y +L +N+ NLT + + +E +H D L+++ K + C+
Sbjct: 11 LDTKNIDKYERYKKLILDYNQHTNLTRITEDDEFNVKHFLDCLSLL---KTGKFNGCE-- 65
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
K++D+GTGAG PG+ L + VTLL+S+ KR FL+ + L N++ +
Sbjct: 66 -----KIIDIGTGAGFPGIPLKLYNERLDVTLLDSLRKRIDFLDGVIEDLGLENIRAIHA 120
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + + +REQ+D+AV+RAVA + L EY + V+VGG F++ KG + +EE+KN++R
Sbjct: 121 RAEEIARTDEYREQFDLAVSRAVANLSTLTEYAMGFVKVGGYFISQKGPEYKEEIKNAKR 180
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKS-RRTPKKYPRDPGTPAKVPL 289
A+++MG + + + + P ++ +K + T KK+PR G P K PL
Sbjct: 181 AIEVMGGEVEDV--IHTPLPNDIDHYIIMIKKVKATDKKFPRGGGKPRKAPL 230
>gi|343520091|ref|ZP_08757061.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Parvimonas sp.
oral taxon 393 str. F0440]
gi|343398632|gb|EGV11164.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Parvimonas sp.
oral taxon 393 str. F0440]
Length = 237
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 12/227 (5%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ +Y +L+WN+K+NLTA+ D + +H D L + + T D +
Sbjct: 21 EKFEIYRKLILEWNKKINLTAITDEEAMNTKHFLDCLLL------TKTGLFDDDKS---- 70
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L + + KVT+L+S+NKR FL + L N++ + GRAE +G
Sbjct: 71 ILDVGTGAGFPAIPLKLYNENLKVTMLDSLNKRIKFLNIVIEDLNLKNIKAIHGRAEEVG 130
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+ FRE +D+ +RAVA + +L E+ +P ++V GLF+A KG EEV+ S+ A + +
Sbjct: 131 RKEGFRESFDIVSSRAVASLSLLLEFTIPFLKVNGLFLAMKGPSYLEEVEISKNAFKKLN 190
Query: 245 ASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L + + +E +R ++ K +TP +PR+ G K PL
Sbjct: 191 CKLENVLNFKIEQNGEISERNILIIKKIGKTPDNFPRNMGQIKKKPL 237
>gi|374583853|ref|ZP_09656947.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus youngiae DSM 17734]
gi|374419935|gb|EHQ92370.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
[Desulfosporosinus youngiae DSM 17734]
Length = 239
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 21/235 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q Q+ + D LL+WN+K+NLT + D +V+ +H DS+ + I+ +
Sbjct: 21 LSELQVTQLCQFGDLLLEWNQKLNLTRITDPQDVILKHFIDSMVLSKFIQGN-------- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ D+GTGAG PG+ L I P+ V L++S+ KR FL+ + L V V
Sbjct: 73 -----RFADLGTGAGFPGIPLKILRPELSVVLVDSLKKRLDFLDMVIKKLNLKKVITVHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE G+D +R +D +RAVA + IL E+ LP+++V GLF+AAKG +E+ SE+
Sbjct: 128 RAEDFGRDSHYRGYFDTVSSRAVARLPILLEFALPVLKVNGLFLAAKGLQADQELAESEK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQ----RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G +C G+ R ++ K +TP ++PR GTP K P+
Sbjct: 188 ALKILGG----ICEGIEHFNLGENAEHRAVLLIRKEIQTPSQFPRKAGTPNKNPI 238
>gi|401680139|ref|ZP_10812062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. ACP1]
gi|400218754|gb|EJO49626.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. ACP1]
Length = 249
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 11/228 (4%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
+Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ P+ S
Sbjct: 33 QQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDPL----------IIKS 82
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
++DVGTGAG PG+ LAI VTL +S+ KR FLE + QL N + + GRAE
Sbjct: 83 GSSIIDVGTGAGFPGIPLAIYDRTVHVTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAE 142
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
L +RE +D+A +RAVA + IL E+ +P V+ GG +A KG +EEV S++A+
Sbjct: 143 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDKALS 201
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ AS+ + +V + +R V K+ +TP KYPR P PL
Sbjct: 202 TLKASIEDVKTVTLPTLDDKRAIVYIKKTGKTPGKYPRKPKEIKDRPL 249
>gi|315925602|ref|ZP_07921812.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621143|gb|EFV01114.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 244
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 137/238 (57%), Gaps = 25/238 (10%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA--IIPPIKNSYTSHC 115
+L+ Q E+++ ++++L N +NLT + D N +E+H+ DSLA + P
Sbjct: 25 SLSEGQLEKLYRFMESLKAVNEHINLTRITDDNAFVEKHLLDSLACPLTP---------- 74
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
++ +++DVGTG G PG+ LAIA P + L+++ K+ +E + L N+++
Sbjct: 75 -----ADQRIIDVGTGGGFPGIPLAIAYPQKQFVLVDATAKKVKAVEKIAADLGLANIEL 129
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
RAE LGK+ ++RE++D A +RAVA IL+E CLPLVR GG F A KG +EE+
Sbjct: 130 TAARAEALGKNPAYRERFDAACSRAVAAYGILSELCLPLVRTGGTFYAWKGEKYREEIDA 189
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTA----VVCLKSRRTPKKYPRDPGTPAKVPL 289
+ V+ +G +++ SQ+ + TA + C+K+ RTP +YPR+ G K PL
Sbjct: 190 AIDGVETLGGGEIRV----SQNLLLKNTAFHVIIQCIKNGRTPAQYPRNYGQIKKKPL 243
>gi|347543189|ref|YP_004857828.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346986227|dbj|BAK81902.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 233
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 126/216 (58%), Gaps = 15/216 (6%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ ++Y++ L+++N+K NLTA+ D ++++ RH DS+ I+ N H N K
Sbjct: 24 EKFNIYMETLIEYNKKFNLTAINDRDKIISRHFLDSILIL----NYKIKH-------NTK 72
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
L DVG+GAG PG+ + I D V L+ES K+ +FL + + L N++ + R E L
Sbjct: 73 LCDVGSGAGFPGIPIKIIRDDLSVDLIESTTKKVIFLYKIIRVLDLKNIKAIDSRVEDLS 132
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+D FRE+YD ++RA+A + L E PLV++ G ++A KG +EE++ + +A++++G
Sbjct: 133 RDKDFREKYDYVLSRAMARLNKLLELSFPLVKINGKYIALKGLKAKEELEEATKAIKILG 192
Query: 245 ASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRD 280
+ ++ ++ P +V K +TP YPR+
Sbjct: 193 GNSEKIINI----PEFNSNLIVINKLFKTPDFYPRE 224
>gi|146297754|ref|YP_001181525.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|189039490|sp|A4XN49.1|RSMG_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145411330|gb|ABP68334.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 253
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 143/247 (57%), Gaps = 15/247 (6%)
Query: 43 KTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA 102
+ L I NSS + L R ++ +L+ N+ NLTA+++ +E + +HI DSL+
Sbjct: 21 RVLEFYSIKNSSVVKELLLR-------FMKLVLEKNKHFNLTAIENEDEFVIKHIADSLS 73
Query: 103 IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLE 162
+I ++NS D ++ VD+G+G G+PG+ + IA P + L +S K+C F+
Sbjct: 74 LIRFLQNS-----DGKL---VRAVDIGSGFGVPGIPVKIAKPSISLVLNDSNKKKCNFMN 125
Query: 163 HAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFV 222
A L +++V RAE LGK+V FRE +D A ARAV ++ +L EY LPL+++GG F+
Sbjct: 126 EAKDHLGLSGIEVVCQRAEELGKEVEFRESFDFAFARAVDKLNVLCEYALPLLKIGGAFL 185
Query: 223 AAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPG 282
A KG + ++E+++++ A+ ++G + ++ +R+ +V K R+TP ++PR
Sbjct: 186 AQKGFECEDELESAKNAIAMLGGEIEKIEKFTLPESDEKRSIIVIRKLRQTPIEFPRKTK 245
Query: 283 TPAKVPL 289
K PL
Sbjct: 246 QIIKKPL 252
>gi|402835694|ref|ZP_10884257.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Mogibacterium
sp. CM50]
gi|402273976|gb|EJU23166.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Mogibacterium
sp. CM50]
Length = 235
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 132/228 (57%), Gaps = 17/228 (7%)
Query: 66 QIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 125
++ Y+ +L N +NLTAV++ +E +E+HI DSL + CD + + +
Sbjct: 20 KMFAYMGKILAANEHINLTAVREEDEFLEKHILDSLT---------CNDCDEFKAAEV-V 69
Query: 126 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 185
VD+GTG G PG+ LAI PD K L +S+NKR +E + + N++++ RAE +G+
Sbjct: 70 VDMGTGGGFPGIPLAITNPDKKFVLADSLNKRLKIIEQFAAELCIDNIELLHIRAEDMGQ 129
Query: 186 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 245
+ ++RE+ D+ V+RAVA + +L+E CLPLVR GG F++ KG ++E ++RA+ ++G
Sbjct: 130 NPAYREKADICVSRAVASLDVLSELCLPLVRKGGYFISYKGDGAEDEFDVAKRAISILGG 189
Query: 246 SLLQLCSVESQSPFGQRTAVVCL----KSRRTPKKYPRDPGTPAKVPL 289
+L +E S + CL K TPK++PR G K P+
Sbjct: 190 ---KLDRIEKPSLKNAYISGHCLLLVKKVAHTPKRFPRKAGAAKKSPI 234
>gi|417849360|ref|ZP_12495281.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1080]
gi|339456238|gb|EGP68830.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
mitis SK1080]
Length = 206
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 117/217 (53%), Gaps = 12/217 (5%)
Query: 74 LLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAG 133
+++WN K+NLTA+ D EV +H DS+A PI N +KL+D+G GAG
Sbjct: 1 MVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP------NETIKLLDIGAGAG 51
Query: 134 LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQY 193
P L + I P VT+++S+NKR FL+ L V GRAE +D +FR QY
Sbjct: 52 FPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQY 111
Query: 194 DVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253
D ARAVA M++L+E +P ++VGG +A K + EE+ ++ A+ L+ + + S
Sbjct: 112 DFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSY 171
Query: 254 ESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
P G R V K + TP KYPR G P K PL
Sbjct: 172 --ALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL 206
>gi|372324297|ref|ZP_09518886.1| rRNA small subunit methyltransfer glucose inhibited division
protein [Oenococcus kitaharae DSM 17330]
gi|366983105|gb|EHN58504.1| rRNA small subunit methyltransfer glucose inhibited division
protein [Oenococcus kitaharae DSM 17330]
Length = 244
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 125/223 (56%), Gaps = 14/223 (6%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA--IIPPIKNSYTSHCDSSCNSNLKLVD 127
Y+ +L +N K+NLTA+ + ++ +H DSL I P+ N L+D
Sbjct: 28 YLTFMLAYNEKVNLTAITEPGDIWLKHFYDSLTPLIFLPVPNPTIKFS---------LID 78
Query: 128 VGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187
VG+GAG PG+ L IA P+ ++TLL+S+ KR VFL+ V L +V+ V GRAE G++
Sbjct: 79 VGSGAGFPGIPLKIADPNLQLTLLDSLQKRIVFLDKLVRKLSLDDVETVHGRAEDFGQNP 138
Query: 188 SFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 247
+FRE+YD A+ARAV+ L E LP V+VGG + K + E+ ++ +A++ +G
Sbjct: 139 NFREKYDFAIARAVSGTNTLLELLLPFVKVGGKAILMKTVHDENEIFHASKALEELGGRA 198
Query: 248 LQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
Q S E P G R +V K T KYPR GTP + P+
Sbjct: 199 SQSFSFE--LPNGDPRVLIVVDKIEPTKNKYPRKAGTPKRSPI 239
>gi|429760964|ref|ZP_19293411.1| 16S rRNA methyltransferase GidB [Veillonella atypica KON]
gi|429176057|gb|EKY17462.1| 16S rRNA methyltransferase GidB [Veillonella atypica KON]
Length = 250
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 11/228 (4%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
+Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y S S +S
Sbjct: 33 QQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLS-------CYDSKIIKSGSS 85
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
++DVGTGAG PG+ LAI VTL +S+ KR FLE + QL N + + GRAE
Sbjct: 86 ---IIDVGTGAGFPGIPLAIYDRTLHVTLFDSLKKRLTFLETVIDELQLTNCKTLHGRAE 142
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
L +RE +D+A +RAVA + IL E+ +P V+ GG +A KG +EEV S++A+
Sbjct: 143 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKQGGYVIALKGAIYEEEVGESDKALS 201
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ AS+ + +V + +R V K+ +TP KYPR P PL
Sbjct: 202 TLKASIEDVRTVTLPTLDDKRAIVYIKKTGKTPGKYPRKPKEIKDKPL 249
>gi|259502035|ref|ZP_05744937.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
gi|259169999|gb|EEW54494.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
Length = 241
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 128/234 (54%), Gaps = 13/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSYTSHCD 116
L+ +Q +Q Y L+ NR++NLT + + N+V +H DSL A+ P +
Sbjct: 17 LSDQQMQQFADYYRQLVATNRQVNLTRITEENDVYLKHFYDSLTGALAEPRLQT------ 70
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
L L D+G GAG P L L IA P KVT+++S+NKR FL+ V+ L V +V
Sbjct: 71 ----EQLTLCDIGAGAGFPSLPLKIAFPQLKVTIVDSLNKRISFLQALVAQLGLTGVTLV 126
Query: 177 RGRAETL-GKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
RAET K REQYD+ +ARAVA + +L+E CLP RVGG +A K +E+ +
Sbjct: 127 HDRAETFSAKQSPHREQYDLVLARAVARLSVLSELCLPAARVGGELLAYKASAADDELAD 186
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ A++ +G + + ++ R +V K TP+KYPR PG P K PL
Sbjct: 187 AQGAIRQLGGEVQKEFALTLPGTAEPRKIIVIDKVAATPQKYPRRPGLPNKKPL 240
>gi|443316799|ref|ZP_21046229.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Leptolyngbya
sp. PCC 6406]
gi|442783587|gb|ELR93497.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Leptolyngbya
sp. PCC 6406]
Length = 259
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 4/231 (1%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPI---KNSYTSHCDSSC 119
Q Q +L N ++NLT + + ++ E+H+ DSL+ + P + D +
Sbjct: 29 QWAQFQALYQGILAGNEQINLTRLTEPDDFWEKHLWDSLSGLWPWLGKGDGSDQRPDWAQ 88
Query: 120 NSNL-KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ + +++D+GTGAG PGL AIA PDW +TLL++ K+ FLE L V+ +
Sbjct: 89 SVTIAQVIDIGTGAGFPGLPAAIAYPDWTITLLDATQKKIRFLEELALEMGLTQVRAIAD 148
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE+LG R +YD+A+ RAV + EY LPLVRVGG+ V +G EE ER
Sbjct: 149 RAESLGHRPHHRGKYDLALLRAVGPVSPCVEYGLPLVRVGGMAVLYRGQWTPEEEATVER 208
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G L + S ++ G R V K R +P K+PR PG PAK PL
Sbjct: 209 VAAQLGGELTAVQSWQTPLTEGMRHCVYLRKVRPSPGKFPRQPGLPAKKPL 259
>gi|339300971|ref|ZP_08650096.1| glucose inhibited division protein B [Streptococcus agalactiae ATCC
13813]
gi|417006012|ref|ZP_11944582.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae FSL
S3-026]
gi|319745619|gb|EFV97920.1| glucose inhibited division protein B [Streptococcus agalactiae ATCC
13813]
gi|341576193|gb|EGS26604.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae FSL
S3-026]
Length = 237
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113
H TL +Q++Q Y L++WN K+NLTA+ D V +H DS+A PI Y
Sbjct: 12 EHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEGVYLKHFYDSIA---PILQGYID 68
Query: 114 HCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNV 173
NS L ++D+G GAG P + + I P+ +T+++S+NKR FL + +L V
Sbjct: 69 ------NSPLSILDIGAGAGFPSIPMKILYPEIDITIIDSLNKRINFLNILANELELSGV 122
Query: 174 QIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEV 233
GRAE G+D FR ++D+ ARAVA M++LAE +P +++ G +A K +EE+
Sbjct: 123 HFFHGRAEDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLKINGRLIALKAAAAEEEL 182
Query: 234 KNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++E+A++ + + + + + P G R + K + TP KYPR GTP K PL
Sbjct: 183 ISAEKALKTLFSQV--TVNKNYKLPNGDDRNITIVSKKKETPNKYPRKAGTPNKKPL 237
>gi|227511970|ref|ZP_03942019.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
gi|227084778|gb|EEI20090.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
Length = 244
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 17/232 (7%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSC 119
Q Q Y L++ N +NLT + + +EV +H DS+ + I+ S CD
Sbjct: 21 QLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQIREQPVSLCD--- 77
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
VG GAG P + L I P K+T+++S+NKR FL V L +V + R
Sbjct: 78 --------VGAGAGFPSIPLKILFPQLKITIVDSLNKRINFLTELVQQLNLKDVTLAHAR 129
Query: 180 AETLG--KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
AE G K VS R+ +D+ ARAVA + +L+E CLPLVRVGG +A K ++E+++++
Sbjct: 130 AEEFGNKKSVS-RQSFDIVTARAVARLGVLSELCLPLVRVGGQMIAMKAAKAEDELEDAK 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ L+G + + +R ++ K + TPKKYPR PGTP + PL
Sbjct: 189 QAISLLGGQVKNDFDFSLPILYEKRHIIIIEKIKDTPKKYPRKPGTPNREPL 240
>gi|390563012|ref|ZP_10245165.1| Ribosomal RNA small subunit methyltransferase G [Nitrolancetus
hollandicus Lb]
gi|390172414|emb|CCF84479.1| Ribosomal RNA small subunit methyltransferase G [Nitrolancetus
hollandicus Lb]
Length = 244
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ E+ LY D LL WNR+MNLT V V E+ + D+LA++P I +H
Sbjct: 17 TLDAATLERFRLYADLLLDWNRRMNLTRVTGVEEIQVKLFADALALMPFILRYQAAH--- 73
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ L+L+D+G+GAG PGL L I P VTL+E+ K+ FL+ ++ L V +
Sbjct: 74 ERTTRLRLIDIGSGAGFPGLPLKIVDPKLDVTLVEATGKKVRFLDAVIAALGLEAVTALH 133
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE L R ++D+ VARAVA + L E +P RVGGL + KG D E S
Sbjct: 134 GRAEDLAHRPDLRGRFDIVVARAVARLPALLELSMPFCRVGGLGLFPKGADAAAEAAEST 193
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS-RRTPKKYPRDPGTPAKVPL 289
A++ + A L+ + V G TA+V ++ + P +YPR PG PAK PL
Sbjct: 194 AALKTLRARLIGIEPVTLPDLAG--TAIVVVEQVGKLPAEYPRRPGMPAKHPL 244
>gi|335427786|ref|ZP_08554706.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
gi|335429225|ref|ZP_08556127.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
gi|334890305|gb|EGM28577.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
gi|334893712|gb|EGM31921.1| 16S rRNA methyltransferase GidB [Haloplasma contractile SSD-17B]
Length = 235
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 131/232 (56%), Gaps = 15/232 (6%)
Query: 61 TRQQEQIHL---YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T QEQI L Y + L++WN+KMNLT++ D EV +H DS+ ++ ++
Sbjct: 16 TISQEQILLLDQYYEHLIEWNKKMNLTSIIDKEEVYLKHFYDSITLV----------INA 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ D+G GAG P + + I PD K+T+++S+NKR F+ + + L +++
Sbjct: 66 DLRQGSTICDIGAGAGFPSIPVKIVRPDLKITIVDSLNKRITFVNYVIKELGLTDIEAKH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE+ + +RE YD ARAVA + IL+E C+PLVR GG F+A KG +EE+K +
Sbjct: 126 DRAESHAE--RYREHYDYVTARAVARLSILSELCIPLVREGGHFIAMKGQTGEEELKEAT 183
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A + +G ++ E G RT ++ K ++TPKKYPR+ G K PL
Sbjct: 184 TAYKTLGTNIKSSHIFELPFQGGTRTIIIFKKIKKTPKKYPRNYGKIKKKPL 235
>gi|335048596|ref|ZP_08541616.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Parvimonas sp. oral
taxon 110 str. F0139]
gi|333758396|gb|EGL35954.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Parvimonas sp. oral
taxon 110 str. F0139]
Length = 237
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 126/227 (55%), Gaps = 12/227 (5%)
Query: 65 EQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLK 124
E+ +Y +L+WN K+NLTA+ D + +H D L + + T + +
Sbjct: 21 EKFEIYRKLILEWNEKINLTAITDEEAMNTKHFLDCLLL------TKTGLFEDTKT---- 70
Query: 125 LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184
++DVGTGAG P + L + + K+T+L+S+NKR FL + L N++ + GRAE +G
Sbjct: 71 VLDVGTGAGFPAIPLKLYNENLKITMLDSLNKRIKFLNIVIENLNLKNIEAIHGRAEEVG 130
Query: 185 KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244
+ FRE +D+ +RAVA + +L E+ +P ++V GLF+A KG EEV+ S+ A++ +
Sbjct: 131 RKDGFRESFDIVSSRAVASLSLLLEFTIPFLKVNGLFLAMKGPSYLEEVETSKNALKKLN 190
Query: 245 ASLLQLCS--VESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L + + +E +R ++ K +TP +PR+ G K PL
Sbjct: 191 CKLENVLNFKIEQNGEISERNILIIKKVGKTPDNFPRNMGQIKKKPL 237
>gi|449016142|dbj|BAM79544.1| similar to glucose inhibited division protein B [Cyanidioschyzon
merolae strain 10D]
Length = 361
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 22/253 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS- 117
L+T Q+ ++ D LL+ NR +NLTA++ EV E+H DSL + I+
Sbjct: 109 LSTPQKRRLSQLCDLLLERNRHVNLTAIRTEPEVYEKHFVDSLRFVDIIETLCAGVSGER 168
Query: 118 ---SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ 174
+ ++ +L+D+G+G G PGLVL IA P W+ LL++ K+C +L AV QL NV
Sbjct: 169 PRLAAPNHFRLLDLGSGGGFPGLVLGIARPSWEFVLLDATRKKCDWLREAVEALQLSNVS 228
Query: 175 IVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE--- 231
++ RAE + RE +D VARAVA + L+E LP VR+GG F+AAK + +
Sbjct: 229 VIWDRAELAAHKPALREAFDCVVARAVARLPALSELALPFVRIGGYFLAAKEYRREASTV 288
Query: 232 ------EVKNSERAVQLMGASLLQLCSVESQ-SPFG--------QRTAVVCLKSRRTPKK 276
E+ ++ R+++ G ++ + ++ +P +R V+ K TP
Sbjct: 289 GDVHWPELASAMRSIEANGGRYMRTVATDTDGAPTACSTDMDDHRRVIVIVHKQHPTPSM 348
Query: 277 YPRDPGTPAKVPL 289
YPR PG P + PL
Sbjct: 349 YPRAPGVPERKPL 361
>gi|297567554|ref|YP_003686526.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
gi|296852003|gb|ADH65018.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
Length = 244
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 10/230 (4%)
Query: 60 NTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
+++Q EQ+ D LL+ N + NLTA+ D + +H+ DSL T
Sbjct: 24 SSQQLEQLSRLYDLLLEANTRTNLTAITDERGFVLKHLVDSL----------TCELSQLL 73
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
+++DVGTGAG PGL L I P +TLLE+ K+ +L+ A L N++ + GR
Sbjct: 74 EGQQRVIDVGTGAGFPGLPLKIVKPALDMTLLEATRKKVEYLDQASQALGLKNIRTLWGR 133
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE RE +D A+ RAV +AE CLP VRVGG + KG + + E+ + +A
Sbjct: 134 AEEQAHRPELREVFDRALVRAVGTTATVAELCLPFVRVGGYLLVQKGPEVEAELGPANKA 193
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +G L+++ + QR +V K+ TP +YPR PG PAK PL
Sbjct: 194 IRALGGKLVEIIKLRLPGIGDQRKLLVIEKNTETPPRYPRRPGVPAKHPL 243
>gi|410582442|ref|ZP_11319548.1| 16S rRNA m(7)G-527 methyltransferase [Thermaerobacter subterraneus
DSM 13965]
gi|410505262|gb|EKP94771.1| 16S rRNA m(7)G-527 methyltransferase [Thermaerobacter subterraneus
DSM 13965]
Length = 246
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 11/212 (5%)
Query: 80 KMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVL 139
+ NLTAV++ E + RH DSL ++ I + + LVD+G+GAG PG+ L
Sbjct: 42 RFNLTAVREDAEALVRHYVDSLVLLG-IAGPWAAEG--------LLVDLGSGAGFPGIPL 92
Query: 140 AIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFREQYDVAV 197
+A P W+ LLES K+ FL AV++ L IV RAE G+ S+REQ D+ V
Sbjct: 93 LVALGPGWRGLLLESQGKKAAFLREAVTVLGLDGRVIVEPVRAEEAGRRDSWREQADLVV 152
Query: 198 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQS 257
ARAVA + +LAEY LPL+RVGG A KG EE + RA ++G L+ VE
Sbjct: 153 ARAVAPLNVLAEYGLPLLRVGGRLWAYKGPRVAEEWEAGRRAATVLGGRLVGAREVELPG 212
Query: 258 PFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
G+R V +K TP YPR PG PA+ PL
Sbjct: 213 GAGRRVLVEVVKEEPTPAGYPRRPGLPARRPL 244
>gi|402574984|ref|YP_006624327.1| 16S rRNA m(7)G-527 methyltransferase [Desulfosporosinus meridiei
DSM 13257]
gi|402256181|gb|AFQ46456.1| 16S rRNA m(7)G-527 methyltransferase [Desulfosporosinus meridiei
DSM 13257]
Length = 239
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 35 FCPHRTRAKTLTTTRIVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVME 94
F + T K LT N + +E L Q Q L+ D LL+WN+K+NLT + D EV+
Sbjct: 2 FSEYSTLIKGLT----YNHTGYE-LTESQVNQFCLFGDLLLEWNQKLNLTRITDPQEVIL 56
Query: 95 RHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESM 154
+H DS+ + I+ + D+GTGAG PG+ L I P+ V L++S+
Sbjct: 57 KHFIDSMVLAKYIQGEH-------------FADLGTGAGFPGIPLKILLPELSVVLVDSL 103
Query: 155 NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPL 214
KR FL+ + +L + RAE G++ +R +D +RAVA + IL EY +P+
Sbjct: 104 KKRLDFLDIVIKTLKLNKIVTNHARAEDFGRNQQYRGFFDSVCSRAVARLPILLEYAMPI 163
Query: 215 VRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTP 274
++V G F+AAKG + +E+ S+ A+ ++ + R ++ K +TP
Sbjct: 164 LKVNGRFIAAKGLNADQELAESKNALLVLNGKPEGIEKYNLGHSAEHRAVILIRKVGKTP 223
Query: 275 KKYPRDPGTPAKVPL 289
+YPR GTP+K P+
Sbjct: 224 SQYPRKAGTPSKNPI 238
>gi|312128797|ref|YP_003993671.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
gi|311778816|gb|ADQ08302.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
Length = 238
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 11/222 (4%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ +L+ NR NLTA+++ E + +HI DSL+++ I+ T N N +D+G
Sbjct: 26 YMNLVLEKNRLFNLTAIENEEEFVIKHIADSLSLLKFIEEENT-------NQNPVAIDIG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
+G G PGL + IA P + L +S K+C F+ A + V +V RAE LG+ F
Sbjct: 79 SGFGAPGLFVKIAMPSLNIFLNDSNKKKCKFMVDAKESLGISGVNVVCERAEVLGRKEEF 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE++D ARAV + +L EY LPL+++GG+F+A KG+ ++E+ + A++L+G + +
Sbjct: 139 REKFDFVFARAVDRLNVLCEYALPLLKIGGVFLAQKGYGCEDEISLASNAIELLGGEIHR 198
Query: 250 LCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ PF + R+ +V K R+TP +PR+ K PL
Sbjct: 199 IEKF--VLPFSEEKRSIIVIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|313665699|ref|YP_004047570.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|392389297|ref|YP_005907706.1| ribosomal RNA small subunit methyltransferase G [Mycoplasma leachii
99/014/6]
gi|312949510|gb|ADR24106.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|339276942|emb|CBV67521.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma leachii
99/014/6]
Length = 232
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 129/230 (56%), Gaps = 15/230 (6%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
+N +F T+N + +++LY L++ N+K NLT + ++NEV E+H DSL + +
Sbjct: 8 FLNYKNF-TINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQ- 65
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
D K+ D+GTG G PG+VL I P+ K+TL+ES NK+ FL++ V
Sbjct: 66 ----IIDQ------KIADIGTGPGFPGVVLKIFFPNIKLTLIESNNKKVNFLKYLVKRLN 115
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L NV+I+ RAE L D ++EQ+D+ ++RAVA + I+ E + LV+V G F+ KG
Sbjct: 116 LNNVEILNKRAEELTND--YKEQFDIVISRAVAYLDIILELGVQLVKVNGSFILLKGPKA 173
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 279
+E+K+ + Q M L+ + +E + FG R + K T YPR
Sbjct: 174 YQEIKDLKNKDQKMNLKLINIQELED-TGFGTRINLFYKKIDHTNNLYPR 222
>gi|256384435|gb|ACU79005.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385267|gb|ACU79836.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455461|gb|ADH21696.1| 16S rRNA methyltransferase GidB [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 231
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 129/230 (56%), Gaps = 16/230 (6%)
Query: 50 IVNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
+N +F T+N + +++LY L+Q N+K NLT + +NEV E+H DSL + +
Sbjct: 8 FLNYKNF-TINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQ- 65
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
D K+ D+GTGAG PG+VL I P+ K+TL+ES NK+ FL++ V +
Sbjct: 66 ----IIDQ------KIADIGTGAGFPGVVLKIFFPNIKLTLIESNNKKANFLKYLVQKLE 115
Query: 170 LLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDP 229
L +V+I+ R E L ++EQ+D+ ++RAVA + I+ E + LV+V G+F+ KG
Sbjct: 116 LNDVEILNKRVEELN---EYKEQFDIVISRAVAYLDIILELGVQLVKVDGMFILLKGPKA 172
Query: 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPR 279
+E+K+ + Q M L+ + +E + FG R + K T YPR
Sbjct: 173 HQEIKDLKNKDQKMNLKLVNIQELED-TGFGTRVNLFYKKIDHTNNLYPR 221
>gi|354566703|ref|ZP_08985874.1| Ribosomal RNA small subunit methyltransferase G [Fischerella sp.
JSC-11]
gi|353544362|gb|EHC13816.1| Ribosomal RNA small subunit methyltransferase G [Fischerella sp.
JSC-11]
Length = 251
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 13/240 (5%)
Query: 57 ETLN----TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+TLN T+QQ Q+ + +L+ N+K+NLT + D E E+H+ DSL + +
Sbjct: 18 QTLNWQPTTKQQVQLQRLYELILEGNQKLNLTRITDPQEFWEKHLWDSLRGVALLLRVGE 77
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S + +D+GTGAG PG+ +AIA PD VTL++S K+ FLE + L N
Sbjct: 78 KDFASPPH---HFIDIGTGAGFPGIPVAIALPDCTVTLVDSTRKKIAFLEQILPELALEN 134
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V+ + GRAE +G+ +R+ YDVA+ RAV+ + AEY LPL++ GGL + +G+ +EE
Sbjct: 135 VKTLTGRAEEIGQQSQYRQNYDVAMIRAVSNASVCAEYTLPLLKQGGLAIIYRGNWTEEE 194
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRR---TPKKYPRDPGTPAKVPL 289
AV+L+G ++ ++E + ++ CL R+ TP K+PR G P PL
Sbjct: 195 TTALTDAVKLLGG---EIEAIEQFTTPLSKSLRHCLYLRKIATTPAKFPRAVGIPTHKPL 251
>gi|312623582|ref|YP_004025195.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
gi|312204049|gb|ADQ47376.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
Length = 238
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ +L+ N+ NLTA+++ E + +HI DSL+++ I+ + N N +D+G
Sbjct: 26 YMNLVLEKNKHFNLTAIENEEEFVIKHIADSLSLLKFIE-------QENSNQNPVAIDIG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
+G G PGL + IA P+ V L +S K+C F+ A + V +V RAE LG+ F
Sbjct: 79 SGFGAPGLFVKIAMPNMNVFLNDSNKKKCKFMNEAKESLGISGVNVVCERAEVLGRKEEF 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE++D ARAV + +L EY LPL+++GG F+A KG + ++E+ ++ A++++G +
Sbjct: 139 REKFDFVFARAVDRLNVLCEYALPLLKIGGAFLAQKGFECEDEIDLAKNAIEILGGEIYG 198
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +R+ ++ K R+TP +PR+ K PL
Sbjct: 199 IEKFVLPYSDEKRSIIIIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|409385190|ref|ZP_11237875.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactococcus raffinolactis 4877]
gi|399207318|emb|CCK18790.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Lactococcus raffinolactis 4877]
Length = 239
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 134/246 (54%), Gaps = 24/246 (9%)
Query: 54 SHFETLNTR----QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKN 109
S ET N + Q+ Q Y + L+ N K+NLTA+ + N+V +H DS+A PI
Sbjct: 8 SSLETFNIQLSDTQKAQFKTYFEFLVSENEKINLTAITEENDVYLKHFYDSIA---PILY 64
Query: 110 SYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169
NS +KL+D+G GAG P + I P+ +VT+++S+NKR FL SL+
Sbjct: 65 GVID------NSPIKLLDIGAGAGFPSFPMKIIYPELQVTIIDSLNKRIKFL---TSLSD 115
Query: 170 LLN-----VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224
L+ V ++ GRAE G++ +R Q+D ARAVA + +L+E LP +R G ++
Sbjct: 116 KLDFDATSVTLLHGRAEDFGQNPIYRGQFDYVTARAVARLNVLSELTLPFLRKDGKLLSL 175
Query: 225 KGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG-QRTAVVCLKSRRTPKKYPRDPGT 283
K +E+ + A+ ++G L +++ P G +R V+ K + TPKK+PR GT
Sbjct: 176 KASQMLDEISEGKHAIAILGGKLGD--TLDYALPNGDERHLVMIEKKKETPKKFPRKAGT 233
Query: 284 PAKVPL 289
P K PL
Sbjct: 234 PNKKPL 239
>gi|227524955|ref|ZP_03955004.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
gi|227087867|gb|EEI23179.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
Length = 244
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 125/232 (53%), Gaps = 17/232 (7%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSC 119
Q Q Y L++ N +NLT + + +EV +H DS+ + I+ S CD
Sbjct: 21 QLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQIREQPVSLCD--- 77
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
VG GAG P + L I P K+T+++S+NKR FL V L +V +V R
Sbjct: 78 --------VGAGAGFPSIPLKILFPQLKITIVDSLNKRINFLTELVQQLNLKDVTLVHAR 129
Query: 180 AETLG--KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
AE G K VS R+ +D+ ARAVA + +L+E CLPLVRVGG +A K ++E+++++
Sbjct: 130 AEEFGNKKSVS-RQSFDIVTARAVARLGVLSELCLPLVRVGGQMIAMKAAKAEDELEDAK 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ L+G + +R ++ K + TPKKYPR PGTP + PL
Sbjct: 189 QAISLLGGQVKNDFDFSLPILDEKRHIIIIEKIKDTPKKYPRKPGTPNREPL 240
>gi|312794737|ref|YP_004027660.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181877|gb|ADQ42047.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 238
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 137/240 (57%), Gaps = 14/240 (5%)
Query: 54 SHFETLNTRQQEQIHL-YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
++ NT +Q+ L Y++ +L+ N+ NLTA++D E + +HI DSL+++ ++
Sbjct: 9 EYYNVKNTLVVKQLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFLE---- 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ S N +D+G+G G PGL + IA P V L +S K+C F+ A +
Sbjct: 65 ---EESSIQNPVAIDIGSGFGAPGLFVKIAMPSINVWLNDSNKKKCNFMIEAKESLGISG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V IV RAE LG+ FRE++D ARAV ++ +L EY LPL+++GG F+A KG+ ++E
Sbjct: 122 VNIVCERAEVLGRKEDFREKFDFVFARAVDKLNVLCEYALPLLKIGGAFLAQKGYVCEDE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQS-PFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + A++L+G +L VE PF +R+ +V K R+TP +PR+ K PL
Sbjct: 182 IDLASNAIELLGG---RLTRVEKFVLPFSDEKRSVIVIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|365851277|ref|ZP_09391715.1| 16S rRNA methyltransferase GidB [Lactobacillus parafarraginis
F0439]
gi|363717100|gb|EHM00484.1| 16S rRNA methyltransferase GidB [Lactobacillus parafarraginis
F0439]
Length = 244
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 128/244 (52%), Gaps = 21/244 (8%)
Query: 53 SSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
S H + Q +Q Y L+ N +NLT + + +EV +H DS I P +
Sbjct: 11 SEHNIQVTDAQIDQFEAYFALLVATNEHVNLTTITEKSEVYLKHFYDS--ITPAF---FV 65
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
S L L DVG AG P + L I P KVT+++S+NKR FL+ V+ QL +
Sbjct: 66 SQIREQP---LTLCDVGANAGFPSIPLKILFPQLKVTIVDSLNKRINFLKELVAKLQLSD 122
Query: 173 VQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
V +V RAE G K + RE +DV ARAVA + +L+E CLPLV+VGG+ +A K ++
Sbjct: 123 VTLVHARAEEFGAKRSASREAFDVVTARAVARLTVLSELCLPLVKVGGIMIALKAVKAED 182
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFG------QRTAVVCLKSRRTPKKYPRDPGTPA 285
E+ +++ A++ +G V + F R +V K TPKKYPR PGTP
Sbjct: 183 ELNDAQAAIKTLGG------QVSADDAFSLPILNETRHIIVINKVTATPKKYPRKPGTPN 236
Query: 286 KVPL 289
+ PL
Sbjct: 237 REPL 240
>gi|427417728|ref|ZP_18907911.1| 16S rRNA m(7)G-527 methyltransferase [Leptolyngbya sp. PCC 7375]
gi|425760441|gb|EKV01294.1| 16S rRNA m(7)G-527 methyltransferase [Leptolyngbya sp. PCC 7375]
Length = 250
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 57 ETLNTRQQEQIHLYVDAL----LQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
ETL + E D L ++ NR++NLT + + +E E+H+ DSL+ + P Y
Sbjct: 17 ETLQWQPSEAQQALFDQLYRGVVEGNRQVNLTRITEPDEFWEKHLWDSLSGLAPW---YE 73
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ +++D+GTG G PG+ +AIA P W+VTLL+S K+ FL+ L N
Sbjct: 74 PEKPDWLPTVKRIIDIGTGGGFPGVPVAIARPRWQVTLLDSTRKKIAFLQTLCEQLGLTN 133
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ RAET+G+D R QYD+A+ RAV AEY LPL++ G V +G EE
Sbjct: 134 TAFLTERAETVGRDPHHRAQYDLALVRAVGPASTCAEYALPLLKKSGFAVLFRGQWTAEE 193
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A+ +G L+ +C E+ G R + K +T K +PR GTPAK PL
Sbjct: 194 EELFMGALDTLGGELVAICPWETPLTQGLRHCLYIKKVEKTDKDFPRQVGTPAKQPL 250
>gi|227509064|ref|ZP_03939113.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191451|gb|EEI71518.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 245
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 124/231 (53%), Gaps = 15/231 (6%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHCDSSC 119
Q Q Y L+ N +NLT + + +EV +H DS+ + I+ S CD
Sbjct: 21 QLGQFDAYFKLLVATNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQIREQPVSICD--- 77
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
VG GAG P + L I P K+T+++S+NKR FL V L +V +V R
Sbjct: 78 --------VGAGAGFPSIPLKILFPQLKITIVDSLNKRIHFLTELVQQLHLKDVTLVHAR 129
Query: 180 AETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
AE G K + R+ +D+ ARAVA + +L+E CLPLV+VGG +A K ++E++++++
Sbjct: 130 AEEFGNKKSASRQSFDIVTARAVARLSVLSELCLPLVKVGGQMIAMKAAKAEDELEDAKQ 189
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ L+G + +R ++ K++ TPKKYPR PGTP + P+
Sbjct: 190 AISLLGGQVKHDFDFSLPILDEKRHIIIIEKTKDTPKKYPRKPGTPNREPI 240
>gi|227485739|ref|ZP_03916055.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
gi|227236294|gb|EEI86309.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
Length = 209
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 120/221 (54%), Gaps = 17/221 (7%)
Query: 69 LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDV 128
+Y D LL+ N NLT + D E+ +H DSL ++ IK K++D+
Sbjct: 6 VYTDYLLEVNSHTNLTTITDPAEIDLKHFKDSLTVLDYIKEGD------------KVLDL 53
Query: 129 GTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS 188
G GAG PG+ L I D+ +TL++S+NK+ F+ + L N + + RAE KD
Sbjct: 54 GAGAGFPGIPLRIE-KDFDLTLIDSVNKKVNFMNEVIEKLGLTNARAIHTRAEDFAKD-- 110
Query: 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248
RE +DV V+RAVA M L+E CLPLV+VGGLF+A KG EEVK + A++++G ++
Sbjct: 111 HREGFDVVVSRAVANMATLSELCLPLVKVGGLFIALKGPKADEEVKEASNALEILGGEVI 170
Query: 249 QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ + +R VV K R K YPR P + PL
Sbjct: 171 EKNHFDLAG--NERCNVVVKKVRSCKKTYPRGQNLPKRKPL 209
>gi|169832368|ref|YP_001718350.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
gi|169639212|gb|ACA60718.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
Length = 240
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 16/234 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA---IIPPIKNSYTSHC 115
L +R+ ++++L + NLTA+ E++ +H DSLA +I P +
Sbjct: 20 LGSRELALFSRFMESLSAGAARHNLTAITTPREIVAKHFLDSLAGLLVIDPAAGT----- 74
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
+++DVG+GAG PGL L I P+ K+TLLES K+ FLE V L VQ+
Sbjct: 75 --------RIIDVGSGAGFPGLPLKIVRPELKLTLLESSRKKADFLEAVVGELGLEGVQV 126
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
RAE G+D + R Y AVARAVA + +L+EYCLP +RV G+ VA KG + E++
Sbjct: 127 TGRRAEEAGRDPAHRGTYHWAVARAVAPVSVLSEYCLPFLRVRGVLVAYKGPEIGAELEQ 186
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ RA++++G ++ ++ +R+ VV K+ TP+++PR G AK PL
Sbjct: 187 ARRALEILGGAVREVLEFTLPGVDDRRSLVVIDKTAPTPERFPRRAGMAAKRPL 240
>gi|339452240|ref|ZP_08655610.1| 16S rRNA methyltransferase GidB [Leuconostoc lactis KCTC 3528]
Length = 255
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 10/226 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q Y D L+ N +NLTA+ + + +H DSL + Y +
Sbjct: 17 LTENQIQQFEQYFDMLVATNAHVNLTAITEKKDAYLKHFYDSLTVA-----QYEKALQQT 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+ L+DVGTGAG P L L IA P+ ++T+++++ KR FL+ V+ L V IV G
Sbjct: 72 TGT---LIDVGTGAGFPSLPLKIAFPNLQITMVDALQKRVKFLQDVVTTLGLTGVTIVHG 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+D +REQ+D A ARAVA +LAEY LP V++GG F+ KG ++E+ + ++
Sbjct: 129 RAEDIGQDPKYREQFDYATARAVARTSVLAEYTLPFVKIGGEFLVMKGSAAEQELADGQK 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTP 284
A+ +G L + S E P G V + + ++ D P
Sbjct: 189 ALATLGGQLRE--SFEFTLPNGDTRYVQIVDKNKKHQRSIHDKLVP 232
>gi|427412763|ref|ZP_18902955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
ratti ACS-216-V-Col6b]
gi|425715579|gb|EKU78565.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
ratti ACS-216-V-Col6b]
Length = 241
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 8/232 (3%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
T+ T Q Q Y + L++ N+++NLTA+ D +EV +H DSL + + +
Sbjct: 17 TVTTNQLAQFTAYYEMLIETNKQLNLTAITDPHEVAVKHFVDSLTALDDDAHIFKQGA-- 74
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
KL+D+GTGAG PG+ LAI PD ++ L +S+ KR FL +S L V +
Sbjct: 75 ------KLLDLGTGAGFPGIPLAIMRPDLEIVLFDSLQKRLNFLSAVISELNLSKVTTLH 128
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE + D RE YD+ +RAVA + +L E+ LP V+ G VA KG ++E+ +
Sbjct: 129 GRAEDMSHDDRHREAYDLVTSRAVARLPVLLEWALPYVKQNGYMVALKGAAYEDEINEAA 188
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ ++ ++ Q+ V+ + +R + K+ TPK YPR P PL
Sbjct: 189 KALTILKGNIEQVKPVQLPTLTDKRAIIYIKKTGVTPKLYPRKPKDIKTKPL 240
>gi|218283288|ref|ZP_03489343.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
gi|218215978|gb|EEC89516.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
Length = 233
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 125/233 (53%), Gaps = 20/233 (8%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN Q + Y+ L++WN KMNLTA+ EV E+H DS I+P + + CD
Sbjct: 17 LNEEQMNRFEKYMQLLIEWNEKMNLTAITQEEEVWEKHFYDS--IMPFSNIDFETMCD-- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+G+GAG PG+ + IA P +TL+E + KRC FL + L N+ I+
Sbjct: 73 ---------IGSGAGFPGIPVKIAFPHVHMTLVEPLQKRCRFLNEVKTQLNLENLDILNV 123
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L K+ RE +DV ARAVA++ IL E C+P V++ VA KG + EE+ N+++
Sbjct: 124 RAEDLAKEK--RECFDVVSARAVAKLSILLELCVPFVKMNRTMVALKGKNGHEELLNAKK 181
Query: 239 AVQLMGASLL--QLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A+ +G L+ + +E + R + K + TP KYPR G K PL
Sbjct: 182 AIDTLGVELVDEEKFMIEEDAT---RINLYFKKVKHTPSKYPRAYGQIKKKPL 231
>gi|422867815|ref|ZP_16914383.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
gi|329577027|gb|EGG58502.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
Length = 200
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTA+ + EV +H DS+++ S+ + DVG GAG P + L
Sbjct: 1 MNLTAITEEKEVYLKHFYDSVSL----------AFFEDFASDKAICDVGAGAGFPSIPLK 50
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
I P VT+++S+NKR FL V+ L NV + RAETL K FR +D ARA
Sbjct: 51 IVFPSLNVTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETLAKQAEFRGAFDYVTARA 110
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VA + +L+E CLPLV+ G F+A K +EE+ ++ A+ +G +
Sbjct: 111 VARLNVLSELCLPLVKKEGYFLALKASKSEEEINEAKPAIATLGGQFQKEVGFTLPITAD 170
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+R VV K + TPKKYPR PG P K P+
Sbjct: 171 ERHIVVIQKKKETPKKYPRKPGLPNKQPI 199
>gi|406838992|ref|ZP_11098586.1| 16S rRNA methyltransferase GidB [Lactobacillus vini DSM 20605]
Length = 245
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 15/235 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAI---IPPIKNSYTSHC 115
L +Q +Q Y L+ NR++NLTA+ EV +H DSL + IP ++ + C
Sbjct: 17 LTAQQLDQFTRYYQLLVATNRRVNLTAITAEEEVYLKHFYDSLVLALAIPQLQVQPWTVC 76
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
D VG GAG P + L IA P ++T+++S+NKR FL+ ++ L V++
Sbjct: 77 D-----------VGAGAGFPSIPLKIAFPQLQITIVDSLNKRINFLQTLITQLDLQQVEL 125
Query: 176 VRGRAETLGKDVS-FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234
RAE G S +R+++D+ ARAVA + +L+E CLPLV+V G F A K +E+
Sbjct: 126 RHARAEEFGSPKSPYRQRFDLVTARAVARLNVLSELCLPLVKVNGKFAAMKAQKAPQELA 185
Query: 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++ A+Q++G + + G R +V K + TP KYPR PG K PL
Sbjct: 186 DAQSAIQILGGKVAADQQIALPENGGVRHVIVIDKVKATPAKYPRKPGLLNKKPL 240
>gi|218437873|ref|YP_002376202.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
gi|218170601|gb|ACK69334.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
Length = 243
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 141/238 (59%), Gaps = 10/238 (4%)
Query: 52 NSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSY 111
++ H++ +Q + LY + LL NR++NLT + + +E E+H+ DSL+ I P+
Sbjct: 16 DTLHWQPTPEQQVKFQRLYEEILLG-NRQLNLTRITESSEFWEKHLWDSLSGIIPL---- 70
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
+ L ++D+GTGAG PGL +AI+ P+W+VTLL+S+ K+ +FL+ + ++
Sbjct: 71 -----GLRDQELSVIDIGTGAGFPGLPVAISYPNWRVTLLDSVQKKLLFLKSLLPKLEIK 125
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
N ++ GR E + +D ++RE +D+A+ RAVA + AEY LPL+++GG + +GH +E
Sbjct: 126 NTTVLIGRVEAIAQDKTYRETFDLALIRAVASASVCAEYGLPLLKLGGRVILYRGHWSEE 185
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E + + AV+ +G + ++ + + R + K TPK+YPR G P + PL
Sbjct: 186 ENLSLDSAVRQLGGKIEEINKLTTPLSESSRHCIYIRKIASTPKQYPRGVGIPRQHPL 243
>gi|339634590|ref|YP_004726231.1| 16S rRNA methyltransferase GidB [Weissella koreensis KACC 15510]
gi|420162223|ref|ZP_14668983.1| glucose inhibited division protein B [Weissella koreensis KCTC
3621]
gi|338854386|gb|AEJ23552.1| 16S rRNA methyltransferase GidB [Weissella koreensis KACC 15510]
gi|394744657|gb|EJF33599.1| glucose inhibited division protein B [Weissella koreensis KCTC
3621]
Length = 239
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 128/239 (53%), Gaps = 20/239 (8%)
Query: 51 VNSSHFET--------LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLA 102
+N FET L+ RQ EQ +Y D L++ N+ M+LT + + NEV +H DSL
Sbjct: 1 MNPEEFETALEKKGIKLDERQLEQYQIYYDYLIEVNQVMDLTNIVEKNEVYLKHFFDSLT 60
Query: 103 IIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLE 162
+ + LKLVDVG GAG P L L IA P ++ +++S+ KR FL
Sbjct: 61 L--------AWAYPALQTEPLKLVDVGAGAGFPSLPLKIAFPQLEIVIVDSLQKRINFLN 112
Query: 163 HAVSLTQLLNVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLF 221
+ L VQ + RAE G K+ RE +DVA ARA+ M +L E LPLV+ GG+
Sbjct: 113 QLIEKLDLTGVQPIHERAEVFGDKNAPTRETFDVATARALKAMPMLVEMTLPLVKRGGVL 172
Query: 222 VAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVVCLKSRRTPKKYPR 279
+A KG EE+++++ A+ +G ++ V+ P G R VV K ++TP KYPR
Sbjct: 173 LAMKGSRAAEEIQDAKVAIPTVGGAVEDQIKVD--LPNGDAREIVVIKKVKKTPAKYPR 229
>gi|313893548|ref|ZP_07827118.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
gi|313441991|gb|EFR60413.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
Length = 250
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 126/228 (55%), Gaps = 11/228 (4%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
Q + ++Y +++ N+ +NLT + D+ EV+ +H+ DSL+ Y S+
Sbjct: 33 EQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLS-------CYDSNI---IKP 82
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
+ ++DVGTGAG PG+ LAI KVTL +S+ KR FLE + L N + GRAE
Sbjct: 83 GMSIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLTFLESVMDELNLTNCTTLHGRAE 142
Query: 182 TLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ 241
L +RE +D+A +RAVA + IL E+ +P V+ GG +A KG +EEV S +A+
Sbjct: 143 DLSHQ-DYRESFDIATSRAVARLPILLEWTVPYVKEGGYVIALKGAIYEEEVGESNKALS 201
Query: 242 LMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ A L ++ +V + +R + K+ +TPK+YPR P PL
Sbjct: 202 TLKAKLEEVRTVTLPTLDDKRAILYIKKTGKTPKQYPRKPKEIKDKPL 249
>gi|423075903|ref|ZP_17064617.1| 16S rRNA methyltransferase GidB [Desulfitobacterium hafniense DP7]
gi|361853131|gb|EHL05317.1| 16S rRNA methyltransferase GidB [Desulfitobacterium hafniense DP7]
Length = 237
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ Q + +Y D L++WN K+NLT++ + E++ +H DSLA++ ++
Sbjct: 21 LSGDQIAKFSIYADRLVEWNEKVNLTSITEPEEIILKHFVDSLALLSLVQGK-------- 72
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+L D+GTGAG PG+ L I P+ +V L++S+ KR FLE + +L VQ V
Sbjct: 73 -----RLADIGTGAGFPGIPLKILLPEVEVYLVDSLAKRLDFLETVIKELKLTKVQTVHA 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +RE +D +RAVA + +L EY +PL++ GG F+AAKG QEEV S++
Sbjct: 128 RAEDFARDPHYRETFDCVTSRAVARLPVLLEYAVPLLKKGGYFLAAKGSQAQEEVMESKK 187
Query: 239 AVQLMG 244
A+ ++G
Sbjct: 188 ALTVLG 193
>gi|403236799|ref|ZP_10915385.1| 16S rRNA methyltransferase GidB [Bacillus sp. 10403023]
Length = 238
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 127/236 (53%), Gaps = 18/236 (7%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L+ Q Q Y L++WN KMNLTA+ + EV +H DS+ S + D
Sbjct: 16 SLSPAQLNQFETYYRLLVEWNEKMNLTAITEKPEVYLKHFYDSI--------SAAFYFDF 67
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
S + DVG GAG P + L I P K+++++S+ KR FL QL NV
Sbjct: 68 S--KEYSICDVGAGAGFPSIPLKICFPQLKISIVDSLQKRITFLHELSKELQLENVTFYH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAET G+ RE +D+ +ARAVA M +L+E CLPLV+V G F+A K EE+++ +
Sbjct: 126 DRAETFGQKGDIRESFDIVMARAVARMSVLSELCLPLVKVDGAFIAMKAASVAEELEDGK 185
Query: 238 RAVQLMGASLLQ----LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+A+ +G L L +ES R V+ K + TPKKYPR PGTP + P+
Sbjct: 186 KAIATLGGKLKDVHHFLLPIES----SDRNIVIIEKKKTTPKKYPRKPGTPNRSPI 237
>gi|340756128|ref|ZP_08692761.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. D12]
gi|419841125|ref|ZP_14364502.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|421500683|ref|ZP_15947675.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313686883|gb|EFS23718.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. D12]
gi|386905877|gb|EIJ70628.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|402267237|gb|EJU16633.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 234
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 18/235 (7%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPI-KNSYTSHCD 116
+L +Q E + YV LL++NR NLTA+++ V+E+HI DSL + I K + T+
Sbjct: 15 SLEEKQIEALLSYVSLLLEYNRHTNLTAIREEKAVLEKHILDSLLLQEFIPKEAKTA--- 71
Query: 117 SSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV 176
+D+GTGAG PG+VLAI P + TL++S+ K+ FLE QL NV++V
Sbjct: 72 ---------IDIGTGAGFPGMVLAICNPHLQFTLMDSVGKKTKFLEVVKEHLQLENVEVV 122
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAE + RE YD+ R V+++ ++ EY +P ++VG LF+ K +EE K +
Sbjct: 123 NARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLKVGALFLPQKMVGTEEE-KEA 181
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+Q++ +S+ + Q P+ Q R + K +T KKYPR G K PL
Sbjct: 182 KKALQVLKSSMQE--EYIRQLPYSQDKRLILKIRKQEKTEKKYPRKAGVITKKPL 234
>gi|15805055|ref|NP_293740.1| 16S rRNA methyltransferase GidB [Deinococcus radiodurans R1]
gi|20177912|sp|Q9RYD6.1|RSMG_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|6457673|gb|AAF09607.1|AE001865_4 gidB protein [Deinococcus radiodurans R1]
Length = 253
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 63 QQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSN 122
+EQ + L N ++NLTA+K +++ +H DSL + H D
Sbjct: 28 HEEQFARLLALLRAGNERLNLTALKTEEDIVLKHFVDSLTTL------RGGHLDGEW--- 78
Query: 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET 182
K +D+GTGAG P L LAI P+ ++T L+S+ K+ F+ + L NV GRAET
Sbjct: 79 -KTLDLGTGAGFPALPLAILRPELRLTPLDSIRKKIDFVRETAAELGLSNVTPQVGRAET 137
Query: 183 LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242
LG+ R YD VARAVA + +LAE LPL+RVGG+FVA KG +EE+ RA
Sbjct: 138 LGQSAEHRGSYDRVVARAVAALPVLAELALPLLRVGGVFVAQKGPLSEEELDAGRRAAGE 197
Query: 243 MGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+G ++++ RT +V K R TP KYPR G P PL
Sbjct: 198 VGGRIIEVDPFTLPVSGDARTLIVLEKQRPTPAKYPRREGVPTHQPL 244
>gi|291297417|ref|YP_003508815.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
gi|290472376|gb|ADD29795.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
Length = 242
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 10/224 (4%)
Query: 66 QIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKL 125
Q L+ + L N+ +NLTA++D ++ +H DSL+ + Y S L +
Sbjct: 28 QFALFFELLTTVNQNLNLTAIRDEEGIIYKHFADSLSCL-----RYAGFA-----SGLSV 77
Query: 126 VDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK 185
+DVGTGAG PGL LAI D + LL++ K+ F+ L+N Q + GR+E LG+
Sbjct: 78 IDVGTGAGFPGLPLAIVRSDIQFDLLDATKKKIEFVAKVAQTLALVNTQALWGRSEELGR 137
Query: 186 DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 245
V RE Y A+ RAVA + AE LPLV+VGG + KG + E+ + A++ +G
Sbjct: 138 QVVKRETYGAALTRAVASLATAAELTLPLVQVGGFVLVQKGAEVARELAEGQGAIRKLGG 197
Query: 246 SLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L Q+ ++ R ++ K TP +YPR PG PAK PL
Sbjct: 198 VLEQVLHLKLPGTGDTRHLIILRKVEPTPPQYPRKPGVPAKNPL 241
>gi|335045670|ref|ZP_08538693.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Oribacterium sp.
oral taxon 108 str. F0425]
gi|333759456|gb|EGL37013.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Oribacterium sp.
oral taxon 108 str. F0425]
Length = 207
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTA+ + +V+ +H DSLA++ K + + S + +DVGTGAG PGL +
Sbjct: 1 MNLTAITEEEDVIVKHFIDSLAMV---KLNVSRETFSKWIEGRRCMDVGTGAGFPGLAIK 57
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IA P ++L +S+ KR FLE V L V GRAE LGK REQYD+ +RA
Sbjct: 58 IAFPSISLSLSDSLQKRIYFLEEVVRELGLKGVDFYHGRAEDLGKKPELREQYDLVFSRA 117
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VA + L+EY LP V+ GG F+A K D EE++ ++A+ +G L ++
Sbjct: 118 VANLSTLSEYDLPFVKKGGYFLAMKSKDISEELEKGKKAIHRLGGKLEEVLEYTLPETDI 177
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
R+ ++ K T KKYPR G P+K PL
Sbjct: 178 GRSLLLVQKIENTAKKYPRKAGVPSKEPL 206
>gi|401565278|ref|ZP_10806122.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC6]
gi|400187989|gb|EJO22174.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Selenomonas
sp. FOBRC6]
Length = 240
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 121/231 (52%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN +MNLTA+ +V +H+ DSL T++ +
Sbjct: 19 LTEEQIAQFSVYNALLVEWNTRMNLTALTAPADVAVKHVIDSL----------TAYDAAL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++ L+DVGTGAGLPG+ LA+ P +VTL++++ KR FL L NV+ +
Sbjct: 69 FDAAQTLIDVGTGAGLPGIPLAVYAPHIRVTLMDALAKRVRFLTEVTQAMNLPNVRCIHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + R YD+AV+RAVA M +L EY LP VRVGG +A KG EE +
Sbjct: 129 RAEEAARQKEHRAHYDIAVSRAVARMPVLLEYTLPFVRVGGAVLALKGRAYAEEAAEAHG 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A + +G + V+ R + K R TPK YPR G P + PL
Sbjct: 189 AAERLGGGAITARPVQLPGLEDVRAILSVTKERPTPKAYPRRAGQPEQSPL 239
>gi|406961093|gb|EKD87926.1| Ribosomal RNA small subunit methyltransferase G, partial
[uncultured bacterium]
Length = 200
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 115/195 (58%), Gaps = 10/195 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L QQ+ +Y L+ WN K NLTA++D + +H DSL + +K +
Sbjct: 16 LTEPQQKAFEIYETELMSWNEKFNLTAIRDAEGIRIKHFLDSLTCLQVMKPLHHE----- 70
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
+++DVGTGAG PG+ L I P K+TL+ES+ K+ F +H V L NV ++
Sbjct: 71 -----RIIDVGTGAGFPGIPLKIIHPGLKLTLVESVGKKAGFCKHLVETLHLENVDVLPL 125
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G+ + R QYD A+ARAVA + IL+EY +PL+++GG +A KG + E + SE
Sbjct: 126 RAEEVGRLPNHRAQYDWAIARAVASLPILSEYLVPLLKIGGRMLAQKGENAHAEAQASEH 185
Query: 239 AVQLMGASLLQLCSV 253
A++L+GA L ++ V
Sbjct: 186 ALKLLGAHLERIEKV 200
>gi|291457896|ref|ZP_06597286.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419440|gb|EFE93159.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
Length = 261
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 10/238 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q E+ LY + + + N+ MNLT++ + ++V+ +H DSL++ S S D S
Sbjct: 20 LTEAQLEKFFLYYERMTEKNKVMNLTSITEESDVVLKHFTDSLSLAAV---SLPSAGDVS 76
Query: 119 CNSNLK-------LVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
+ L+ L+DVGTGAG PGL L IA P+ +V L +S+ KR FL + L
Sbjct: 77 RETLLRNTLPGKRLIDVGTGAGFPGLALKIAFPELEVVLNDSLQKRLRFLNELIEELNLK 136
Query: 172 NVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQE 231
+ V GRAE L + +R +D +V+RAVA + +L+EY LP V+ GG F+A K +E
Sbjct: 137 GISCVHGRAEELAHERKWRGAFDFSVSRAVARLSVLSEYDLPFVKNGGYFLAMKAGGIEE 196
Query: 232 EVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
E++ ++ A++L+G L++ S +R+ ++ K R +P +YPR G P+K PL
Sbjct: 197 ELEEAKAAIRLLGGKLIKRESFILPESDIERSILLIGKLRESPSRYPRRAGIPSKEPL 254
>gi|344997641|ref|YP_004799984.1| ribosomal RNA small subunit methyltransferase G
[Caldicellulosiruptor lactoaceticus 6A]
gi|343965860|gb|AEM75007.1| Ribosomal RNA small subunit methyltransferase G
[Caldicellulosiruptor lactoaceticus 6A]
Length = 238
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 136/231 (58%), Gaps = 14/231 (6%)
Query: 54 SHFETLNTRQQEQIHL-YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+++ NT +Q+ L Y++ +L+ N+ NLTA++D E + +HI DSL+++ ++
Sbjct: 9 EYYKVKNTLVVKQLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFLE---- 64
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ S + N +D+G+G G PGL + IA P V L +S K+C F+ A +
Sbjct: 65 ---EESSSQNPVAIDIGSGFGAPGLFVKIAMPSINVWLNDSNKKKCNFMIEAKESLGISG 121
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
V +V RAE LG+ FRE++D ARAV + +L EY LPL+++GG F+A KG+ ++E
Sbjct: 122 VNVVCERAEVLGRKEDFREKFDFVFARAVDRLNVLCEYALPLLKIGGAFLAQKGYVCEDE 181
Query: 233 VKNSERAVQLMGASLLQLCSVESQS-PFG--QRTAVVCLKSRRTPKKYPRD 280
++ + A++L+G +L VE PF +R+ +V K R+TP +PR+
Sbjct: 182 IELASNAIELLGG---RLTRVEKFVLPFSDEKRSVIVIKKLRQTPSNFPRN 229
>gi|19705043|ref|NP_602538.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|22095723|sp|Q8RI89.1|RSMG_FUSNN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19712959|gb|AAL93837.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 232
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 132/224 (58%), Gaps = 22/224 (9%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ LL +N NLTA+++ ++E+H DSL + +K+ + L+D+G
Sbjct: 27 YLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIG 75
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PG++LAI D K TLL+S+ K+ FLE + L NV+++ GRAE + KD
Sbjct: 76 TGAGFPGMILAIFNEDKKFTLLDSVRKKTDFLELVKNELALNNVEVINGRAEEIIKDR-- 133
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASL 247
RE+YDV + R V+ + ++ EY +P ++V G F+ K G D E+KNS A++++ + +
Sbjct: 134 REKYDVGLCRGVSNLSVILEYEIPFLKVNGRFLPQKMIGTD---EIKNSSNALKILNSKI 190
Query: 248 LQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ E + PF R + LK+++T +KYPR G P K PL
Sbjct: 191 LK--EYEFKLPFSNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|222530699|ref|YP_002574581.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
gi|254766875|sp|B9MQF1.1|RSMG_ANATD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222457546|gb|ACM61808.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
Length = 238
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ +L+ N+ NLTA+++ E + +HI DSL+++ I+ + N N +D+G
Sbjct: 26 YMNLVLEKNKLFNLTAIENEEEFVIKHIADSLSLLKFIE-------QENSNQNPVAIDIG 78
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
+G G PGL + IA P V L +S K+C F+ A + V +V RAE LG+ F
Sbjct: 79 SGFGAPGLFVKIAMPSVNVFLNDSNKKKCKFMNEAKESLGISGVNVVCERAEVLGRKEEF 138
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249
RE++D ARAV + +L EY +PL++VGG F+A KG + ++E+ ++ A++++G +
Sbjct: 139 REKFDFVFARAVDRLNVLCEYAIPLLKVGGAFLAQKGFECEDEIDLAKNAIEILGGEIYS 198
Query: 250 LCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ +R+ ++ K R+TP +PR+ K PL
Sbjct: 199 IEKFVLPYSDEKRSIIIIKKLRQTPSNFPRNTKQIVKKPL 238
>gi|358068678|ref|ZP_09155134.1| hypothetical protein HMPREF9333_02016 [Johnsonella ignava ATCC
51276]
gi|356693130|gb|EHI54815.1| hypothetical protein HMPREF9333_02016 [Johnsonella ignava ATCC
51276]
Length = 248
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 14/234 (5%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAII---PPIKNSYTSHC 115
LN + + + + L++ N+ MNLTA+ + E + +H DSL+I+ P +K+ S
Sbjct: 26 LNDDEINKFYSFYLKLIEVNKYMNLTAITGLKECVFKHFIDSLSIVRILPSLKDKKIS-- 83
Query: 116 DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI 175
++D+GTGAG P + +A+A + + L+S+NKR F+ +L N+
Sbjct: 84 ---------IIDIGTGAGFPSIPIALAFKECNIYALDSLNKRIKFINDVKEELKLKNISA 134
Query: 176 VRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN 235
GRAE FR+ +++ V+RAVA + L+EYCLP + + F+A K +E+KN
Sbjct: 135 YHGRAEDYAFKSGFRDGFELVVSRAVANLSTLSEYCLPFIHINSTFIAYKSDKCLQEIKN 194
Query: 236 SERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
S+ A++++G + + R+ V K R+TP+KYPR G +K PL
Sbjct: 195 SKTALEILGGKIELTDNFTLPYEEAGRSLVKIKKVRQTPQKYPRKAGIASKTPL 248
>gi|296329305|ref|ZP_06871806.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153661|gb|EFG94478.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 232
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 132/224 (58%), Gaps = 22/224 (9%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ LL +N NLTA+++ ++E+H DSL + +K+ + L+D+G
Sbjct: 27 YLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIG 75
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PG++LAI D K TLL+S+ K+ FLE + L NV+++ GRAE + KD
Sbjct: 76 TGAGFPGMILAIFNEDKKFTLLDSVRKKTDFLELVKNELALNNVEVINGRAEEIIKDR-- 133
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASL 247
RE+YDV + R V+ + ++ EY +P ++V G F+ K G D E+KNS A++++ + +
Sbjct: 134 REKYDVGLCRGVSNLSVILEYEIPFLKVNGRFLPQKMVGTD---EIKNSSNALKILNSKI 190
Query: 248 LQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ E + PF R + LK+++T +KYPR G P K PL
Sbjct: 191 LK--EYEFKLPFSNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|260558219|ref|ZP_05830415.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|261206909|ref|ZP_05921598.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|314940139|ref|ZP_07847319.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|314943030|ref|ZP_07849834.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|314948148|ref|ZP_07851544.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
gi|314953438|ref|ZP_07856356.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|314993823|ref|ZP_07859159.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|314998152|ref|ZP_07863034.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|389869879|ref|YP_006377302.1| glucose-inhibited division protein B [Enterococcus faecium DO]
gi|424793328|ref|ZP_18219453.1| 16S rRNA methyltransferase GidB [Enterococcus faecium V689]
gi|424806860|ref|ZP_18232283.1| 16S rRNA methyltransferase GidB [Enterococcus faecium S447]
gi|424819231|ref|ZP_18244357.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R501]
gi|424857940|ref|ZP_18282019.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R499]
gi|424907553|ref|ZP_18331032.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R497]
gi|424951464|ref|ZP_18366558.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R496]
gi|424953282|ref|ZP_18368255.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R494]
gi|424957780|ref|ZP_18372487.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R446]
gi|424962345|ref|ZP_18376707.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1986]
gi|424963534|ref|ZP_18377744.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1190]
gi|424967266|ref|ZP_18380973.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1140]
gi|424971801|ref|ZP_18385209.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1139]
gi|424975887|ref|ZP_18389014.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1137]
gi|424978590|ref|ZP_18391500.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1123]
gi|424981737|ref|ZP_18394447.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV99]
gi|424984804|ref|ZP_18397321.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV69]
gi|424989009|ref|ZP_18401298.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV38]
gi|424990993|ref|ZP_18403176.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV26]
gi|424996485|ref|ZP_18408288.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV168]
gi|424999000|ref|ZP_18410653.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV165]
gi|425002217|ref|ZP_18413665.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV161]
gi|425005655|ref|ZP_18416876.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV102]
gi|425008335|ref|ZP_18419421.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV1]
gi|425012501|ref|ZP_18423311.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E422]
gi|425013683|ref|ZP_18424402.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E417]
gi|425016687|ref|ZP_18427236.1| 16S rRNA methyltransferase GidB [Enterococcus faecium C621]
gi|425020967|ref|ZP_18431252.1| 16S rRNA methyltransferase GidB [Enterococcus faecium C497]
gi|425024286|ref|ZP_18434359.1| 16S rRNA methyltransferase GidB [Enterococcus faecium C1904]
gi|425033625|ref|ZP_18438579.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 515]
gi|425034574|ref|ZP_18439457.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 514]
gi|425040408|ref|ZP_18444882.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 513]
gi|425040639|ref|ZP_18445094.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 511]
gi|425047059|ref|ZP_18451036.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 510]
gi|425050509|ref|ZP_18454247.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 509]
gi|425053371|ref|ZP_18456917.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 506]
gi|425054268|ref|ZP_18457780.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 505]
gi|425062484|ref|ZP_18465637.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 503]
gi|260075393|gb|EEW63699.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|260078537|gb|EEW66239.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|313587864|gb|EFR66709.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|313591714|gb|EFR70559.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|313594541|gb|EFR73386.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|313598230|gb|EFR77075.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|313640644|gb|EFS05224.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|313645402|gb|EFS09982.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
gi|388535128|gb|AFK60320.1| glucose-inhibited division protein B [Enterococcus faecium DO]
gi|402916446|gb|EJX37324.1| 16S rRNA methyltransferase GidB [Enterococcus faecium V689]
gi|402918783|gb|EJX39445.1| 16S rRNA methyltransferase GidB [Enterococcus faecium S447]
gi|402926531|gb|EJX46566.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R501]
gi|402927810|gb|EJX47739.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R499]
gi|402930083|gb|EJX49780.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R496]
gi|402930144|gb|EJX49835.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R497]
gi|402939440|gb|EJX58348.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R494]
gi|402940997|gb|EJX59759.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1986]
gi|402942719|gb|EJX61284.1| 16S rRNA methyltransferase GidB [Enterococcus faecium R446]
gi|402948828|gb|EJX66930.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1190]
gi|402952360|gb|EJX70182.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1137]
gi|402954792|gb|EJX72379.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1140]
gi|402957357|gb|EJX74749.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1139]
gi|402961173|gb|EJX78230.1| 16S rRNA methyltransferase GidB [Enterococcus faecium P1123]
gi|402962633|gb|EJX79553.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV99]
gi|402967767|gb|EJX84293.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV69]
gi|402970162|gb|EJX86523.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV38]
gi|402973434|gb|EJX89561.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV168]
gi|402978117|gb|EJX93881.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV26]
gi|402981062|gb|EJX96616.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV165]
gi|402984001|gb|EJX99339.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV161]
gi|402985333|gb|EJY00550.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV102]
gi|402992819|gb|EJY07486.1| 16S rRNA methyltransferase GidB [Enterococcus faecium ERV1]
gi|402992956|gb|EJY07609.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E422]
gi|403000496|gb|EJY14613.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E417]
gi|403006352|gb|EJY20003.1| 16S rRNA methyltransferase GidB [Enterococcus faecium C621]
gi|403007234|gb|EJY20824.1| 16S rRNA methyltransferase GidB [Enterococcus faecium C1904]
gi|403007968|gb|EJY21503.1| 16S rRNA methyltransferase GidB [Enterococcus faecium C497]
gi|403009212|gb|EJY22675.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 515]
gi|403012993|gb|EJY26143.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 513]
gi|403020072|gb|EJY32632.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 514]
gi|403022560|gb|EJY34917.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 510]
gi|403023296|gb|EJY35569.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 509]
gi|403028083|gb|EJY39924.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 511]
gi|403030602|gb|EJY42279.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 506]
gi|403036315|gb|EJY47666.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 505]
gi|403038077|gb|EJY49315.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 503]
Length = 242
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 22 LTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 72 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 128
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 129 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 188
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 189 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPTPKKYPRKPGLPNKQPI 241
>gi|447913949|ref|YP_007395361.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Enterococcus faecium NRRL B-2354]
gi|445189658|gb|AGE31300.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Enterococcus faecium NRRL B-2354]
Length = 237
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + +PKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPSPKKYPRKPGLPNKQPI 236
>gi|69247496|ref|ZP_00604366.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257878638|ref|ZP_05658291.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257881304|ref|ZP_05660957.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257885579|ref|ZP_05665232.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257890521|ref|ZP_05670174.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257893097|ref|ZP_05672750.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|289567292|ref|ZP_06447671.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|293563243|ref|ZP_06677695.1| methyltransferase GidB [Enterococcus faecium E1162]
gi|293569167|ref|ZP_06680473.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|294616667|ref|ZP_06696438.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|294619737|ref|ZP_06699142.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|294623751|ref|ZP_06702579.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|383330173|ref|YP_005356057.1| Ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium Aus0004]
gi|406580274|ref|ZP_11055488.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD4E]
gi|406582510|ref|ZP_11057629.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD3E]
gi|406584784|ref|ZP_11059803.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD2E]
gi|406589596|ref|ZP_11064027.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD1E]
gi|415892371|ref|ZP_11549908.1| methyltransferase GidB [Enterococcus faecium E4453]
gi|416143522|ref|ZP_11599796.1| methyltransferase GidB [Enterococcus faecium E4452]
gi|427396873|ref|ZP_18889499.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
durans FB129-CNAB-4]
gi|430820765|ref|ZP_19439387.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0045]
gi|430823202|ref|ZP_19441774.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0120]
gi|430826513|ref|ZP_19444695.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0164]
gi|430828700|ref|ZP_19446817.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0269]
gi|430831754|ref|ZP_19449802.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0333]
gi|430842989|ref|ZP_19460891.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1050]
gi|430848152|ref|ZP_19465979.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1133]
gi|430850626|ref|ZP_19468383.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1185]
gi|430855838|ref|ZP_19473544.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1392]
gi|430861167|ref|ZP_19478756.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1573]
gi|430866235|ref|ZP_19481512.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1574]
gi|430888497|ref|ZP_19484370.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1575]
gi|430952209|ref|ZP_19486252.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1576]
gi|430998677|ref|ZP_19488060.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1578]
gi|431213208|ref|ZP_19501073.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1620]
gi|431235069|ref|ZP_19503092.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1622]
gi|431255546|ref|ZP_19504669.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1623]
gi|431303608|ref|ZP_19508455.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1626]
gi|431380570|ref|ZP_19510951.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1627]
gi|431545140|ref|ZP_19518781.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1731]
gi|431726699|ref|ZP_19525450.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1904]
gi|431743896|ref|ZP_19532769.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2071]
gi|431747305|ref|ZP_19536103.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2134]
gi|431749492|ref|ZP_19538232.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2297]
gi|431756031|ref|ZP_19544673.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2883]
gi|431764835|ref|ZP_19553363.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E4215]
gi|431768140|ref|ZP_19556581.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1321]
gi|431769357|ref|ZP_19557767.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1644]
gi|431774639|ref|ZP_19562945.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2369]
gi|431777527|ref|ZP_19565780.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2560]
gi|431779792|ref|ZP_19567983.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E4389]
gi|431782430|ref|ZP_19570563.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E6012]
gi|431784251|ref|ZP_19572293.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E6045]
gi|68194821|gb|EAN09296.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257812866|gb|EEV41624.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257816962|gb|EEV44290.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257821435|gb|EEV48565.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257826881|gb|EEV53507.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257829476|gb|EEV56083.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|289160911|gb|EFD08832.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|291588136|gb|EFF19978.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|291590487|gb|EFF22225.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|291594007|gb|EFF25476.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|291596705|gb|EFF27928.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|291604782|gb|EFF34264.1| methyltransferase GidB [Enterococcus faecium E1162]
gi|364089241|gb|EHM31947.1| methyltransferase GidB [Enterococcus faecium E4452]
gi|364093359|gb|EHM35637.1| methyltransferase GidB [Enterococcus faecium E4453]
gi|378939867|gb|AFC64939.1| Ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium Aus0004]
gi|404454291|gb|EKA01242.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD4E]
gi|404457966|gb|EKA04438.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD3E]
gi|404463588|gb|EKA09199.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD2E]
gi|404470560|gb|EKA15181.1| 16S rRNA methyltransferase GidB [Enterococcus sp. GMD1E]
gi|425722620|gb|EKU85514.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
durans FB129-CNAB-4]
gi|430439151|gb|ELA49523.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0045]
gi|430442300|gb|ELA52345.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0120]
gi|430445026|gb|ELA54816.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0164]
gi|430480395|gb|ELA57569.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0333]
gi|430483240|gb|ELA60334.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0269]
gi|430498043|gb|ELA74051.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1050]
gi|430534985|gb|ELA75408.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1185]
gi|430535818|gb|ELA76215.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1133]
gi|430546380|gb|ELA86342.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1392]
gi|430550200|gb|ELA89997.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1573]
gi|430551463|gb|ELA91214.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1574]
gi|430556013|gb|ELA95536.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1575]
gi|430557344|gb|ELA96803.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1576]
gi|430563338|gb|ELB02563.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1578]
gi|430570461|gb|ELB09421.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1620]
gi|430572929|gb|ELB11765.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1622]
gi|430577744|gb|ELB16324.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1623]
gi|430580249|gb|ELB18729.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1626]
gi|430582438|gb|ELB20865.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1627]
gi|430592188|gb|ELB30210.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1731]
gi|430595722|gb|ELB33605.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1904]
gi|430605959|gb|ELB43331.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2071]
gi|430606673|gb|ELB44018.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2134]
gi|430611489|gb|ELB48576.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2297]
gi|430616146|gb|ELB53071.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2883]
gi|430629869|gb|ELB66257.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1321]
gi|430629923|gb|ELB66305.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E4215]
gi|430633849|gb|ELB70000.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2369]
gi|430636932|gb|ELB72976.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1644]
gi|430639141|gb|ELB75022.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E2560]
gi|430641360|gb|ELB77169.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E4389]
gi|430647067|gb|ELB82515.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E6012]
gi|430649825|gb|ELB85192.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E6045]
Length = 237
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPTPKKYPRKPGLPNKQPI 236
>gi|373462902|ref|ZP_09554565.1| 16S rRNA methyltransferase GidB [Lactobacillus kisonensis F0435]
gi|371765791|gb|EHO54090.1| 16S rRNA methyltransferase GidB [Lactobacillus kisonensis F0435]
Length = 242
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 13/231 (5%)
Query: 62 RQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNS 121
Q Q Y L+ N +NLT + + EV +H DS I P + S +
Sbjct: 20 EQMSQFDAYFKLLVAVNEHVNLTTITEKPEVYLKHFYDS--ITPAF---FVSQIQTEP-- 72
Query: 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE 181
L + DVG GAG P + L I P KVT+++S+NKR FL+ V +L NV + RAE
Sbjct: 73 -LTICDVGAGAGFPSIPLKILFPQLKVTIVDSLNKRINFLQTLVDTLKLDNVALFHARAE 131
Query: 182 TLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAV 240
G K R+ +D+ ARAVA M +L+E CLPLV+VGG +A K ++E+ +S+ A+
Sbjct: 132 EFGAKRSPQRQSFDIVSARAVARMAVLSELCLPLVKVGGKMIAMKAAKAEDELADSKAAI 191
Query: 241 QLMGASLLQLCSVESQSPFGQ--RTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+++G + E P + R +V K TPKKYPR PGTP + P+
Sbjct: 192 KVLGGKV--SGDFEFSLPISEEARHIIVIDKVNDTPKKYPRKPGTPNREPI 240
>gi|291547595|emb|CBL20703.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. SR1/5]
Length = 200
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 10/209 (4%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLT + + +EV+ +H DSL + + ++D+GTGAG PG+ L
Sbjct: 1 MNLTGITEFDEVLVKHFLDSLCCVKAVDMGKIK----------TVMDIGTGAGFPGVPLK 50
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IA P+ + LL+S+NKR FLE +L L + + GRAE K+ ++RE+YD+ V+RA
Sbjct: 51 IAFPEVEACLLDSLNKRVKFLEETFALLGLEGISAIHGRAEEYAKNKAYREKYDLCVSRA 110
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
V+ + L+EYCLP V+VGGLFV+ K +EE + +E+AV+++G + + +
Sbjct: 111 VSGLATLSEYCLPYVKVGGLFVSYKSGSVKEEAEAAEKAVKILGGKIRDIQYFDLPGSEI 170
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
R+ V+ K + TP KYPR GTP + PL
Sbjct: 171 GRSLVIIEKVKNTPGKYPRKAGTPLREPL 199
>gi|227514197|ref|ZP_03944246.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
gi|227087429|gb|EEI22741.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
Length = 253
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSY 111
H L Q Q Y L+Q N +NLTA+ EV +H DSL A P S
Sbjct: 20 DHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQS- 78
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
L L D+G GAG P L L IA P +VT+++S+NKR FL L
Sbjct: 79 ---------QALTLCDIGAGAGFPSLPLKIAFPQLEVTIVDSLNKRINFLADLCDDLGLT 129
Query: 172 NVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V +V RAET K +REQ+D+ ARAVA + +L E CLP +VGG F+A K
Sbjct: 130 GVHLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVN 189
Query: 231 EEVKNSERAVQLMGASLLQLC--SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+E+K + A+ +G + ++ ++ +R VV K +TP KYPR PG PAK P
Sbjct: 190 DELKLATGAINKLGGQVAGTTKLTLPTKPEAEERNLVVIDKVAKTPGKYPRRPGVPAKKP 249
Query: 289 L 289
L
Sbjct: 250 L 250
>gi|385811835|ref|YP_005848226.1| glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
gi|299782734|gb|ADJ40732.1| Glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
Length = 245
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 120/241 (49%), Gaps = 15/241 (6%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSY 111
H L Q Q Y L+Q N +NLTA+ EV +H DSL A P S
Sbjct: 12 DHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQS- 70
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
L L D+G GAG P L L IA P +VT+++S+NKR FL L
Sbjct: 71 ---------QALTLCDIGAGAGFPSLPLKIAFPQLEVTIVDSLNKRINFLADLCDDLGLT 121
Query: 172 NVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V +V RAET K +REQ+D+ ARAVA + +L E CLP +VGG F+A K
Sbjct: 122 GVXLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVN 181
Query: 231 EEVKNSERAVQLMGASLLQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+E+K + A+ +G + + + G +R VV K +TP KYPR PG PAK P
Sbjct: 182 DELKLATGAINKLGGQVAGTTKLTLPTKPGAEERNLVVIDKIAKTPGKYPRRPGVPAKKP 241
Query: 289 L 289
L
Sbjct: 242 L 242
>gi|430853345|ref|ZP_19471075.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1258]
gi|430541167|gb|ELA81344.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1258]
Length = 237
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIGLLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPTPKKYPRKPGLPNKQPI 236
>gi|430836311|ref|ZP_19454292.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0680]
gi|431506954|ref|ZP_19515780.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1634]
gi|430488438|gb|ELA65109.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0680]
gi|430587341|gb|ELB25574.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1634]
Length = 237
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMNQFAIYYRRLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPLSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPTPKKYPRKPGLPNKQPI 236
>gi|184154551|ref|YP_001842891.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum IFO 3956]
gi|238689197|sp|B2GF22.1|RSMG_LACF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183225895|dbj|BAG26411.1| cell division protein GidB [Lactobacillus fermentum IFO 3956]
Length = 245
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSL--AIIPPIKNSY 111
H L Q Q Y L+Q N +NLTA+ EV +H DSL A P S
Sbjct: 12 DHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTGAFAYPKLQS- 70
Query: 112 TSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL 171
L L D+G GAG P L L IA P +VT+++S+NKR FL L
Sbjct: 71 ---------QALTLCDIGAGAGFPSLPLKIAFPQLEVTIVDSLNKRINFLADLCDDLGLT 121
Query: 172 NVQIVRGRAETLG-KDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQ 230
V +V RAET K +REQ+D+ ARAVA + +L E CLP +VGG F+A K
Sbjct: 122 GVYLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLPAAKVGGAFLAYKASAVN 181
Query: 231 EEVKNSERAVQLMGASLLQLC--SVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVP 288
+E+K + A+ +G + ++ ++ +R VV K +TP KYPR PG PAK P
Sbjct: 182 DELKLATGAINKLGGQVAGTTKLTLPTKPEAEERNLVVIDKVAKTPGKYPRRPGVPAKKP 241
Query: 289 L 289
L
Sbjct: 242 L 242
>gi|186685535|ref|YP_001868731.1| 16S rRNA methyltransferase GidB [Nostoc punctiforme PCC 73102]
gi|238689423|sp|B2J5Q6.1|RSMG_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|186467987|gb|ACC83788.1| methyltransferase GidB [Nostoc punctiforme PCC 73102]
Length = 244
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 130/237 (54%), Gaps = 10/237 (4%)
Query: 57 ETLN----TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
+TLN +QQEQ + +L+ NR++NLT + D E E+H+ DSL I P+ +
Sbjct: 14 QTLNWQPTVQQQEQFQRLYELILEGNRQLNLTRITDPQEFWEKHLWDSLRGILPLLSGNL 73
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ ++D+GTGAG PG+ +A+ P+ +TLL+S K+ FL++ ++ L N
Sbjct: 74 PPASPT------IIDIGTGAGFPGVPVAMTVPNCTITLLDSTQKKITFLDNILTELALTN 127
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ + GRAE +G+ R YD+A+ RAV + + AEY LPL++ GGL + +G+ ++E
Sbjct: 128 TKTIVGRAEKIGQHPQHRMAYDIALIRAVGAVSVCAEYTLPLLKQGGLAIIYRGNWTKDE 187
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ AV+L+G + + + R V K TP ++PR G P + PL
Sbjct: 188 TTALQNAVKLLGGVIESIEQFTTPLSHSIRHCVYLRKVATTPVQFPRPIGVPTQKPL 244
>gi|342217006|ref|ZP_08709653.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Peptoniphilus
sp. oral taxon 375 str. F0436]
gi|341587896|gb|EGS31296.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Peptoniphilus
sp. oral taxon 375 str. F0436]
Length = 200
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query: 81 MNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLA 140
MNLTA+ + E +H DSL+++ +++D+GTGAG PG+ L
Sbjct: 1 MNLTAITEDEEFNIKHFLDSLSLLKL----------EEIQGAKRILDLGTGAGFPGVPLK 50
Query: 141 IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200
IA D +TLL+S+ KR FL ++ L ++ + RAE L + +RE +D+ +RA
Sbjct: 51 IAKKDLDITLLDSLKKRIDFLNESIEDMGLEGIRGIHARAEELSRKDDYREAFDLVTSRA 110
Query: 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260
VA + L EYCLP V+VGG VA KG D + E+K + A++ +G L+++ V+
Sbjct: 111 VANLATLYEYCLPFVKVGGYMVAMKGPDIEGELKEGQAALKALGGELVEVKKVDLPQDI- 169
Query: 261 QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+ T V+ K + TPKKYPR G P K P+
Sbjct: 170 EHTLVLVKKVKATPKKYPRAGGKPRKNPI 198
>gi|67922987|ref|ZP_00516481.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
gi|67855135|gb|EAM50400.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
Length = 241
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 131/230 (56%), Gaps = 12/230 (5%)
Query: 64 QEQIH----LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
QEQ+ LY + +L NR++NLT + + N+ +E+H+ DSLA + I + ++ DS
Sbjct: 20 QEQLEQWEKLYQEIILI-NRQINLTRITEPNDFLEKHLWDSLAGV--IGLDFLNYEDS-- 74
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
LK+VD+GTGAG PGL ++I P W++TLL+S K+ ++ + +L N Q GR
Sbjct: 75 ---LKVVDIGTGAGFPGLPISIIFPHWQLTLLDSTRKKINVIKLFLEALKLNNSQTFIGR 131
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE +G REQYD+ + RAV E + AEY LP ++VGG+ V +G+ +EE N A
Sbjct: 132 AEDIGHIPEHREQYDLGLIRAVGEPSVCAEYVLPFLKVGGIGVLYRGNWQKEEEINLNNA 191
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +G L+ + E+ R + K P+ +PR G P + PL
Sbjct: 192 LKQLGGKLILVKQFETPLTKSIRHFIYVEKITNIPEYFPRPVGIPKQNPL 241
>gi|313472996|ref|ZP_07813483.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
gi|313448827|gb|EEQ67802.2| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
Length = 264
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 125/217 (57%), Gaps = 9/217 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
LN +Q +Q Y L++ N +NLT + D+ EV +H DSL + + D
Sbjct: 17 LNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSL-------TPFLEYPDLF 69
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++ DVG GAG P + + I P+ ++ +++S+NKR FL + L V+++ G
Sbjct: 70 KKGHI--CDVGAGAGFPSIPIKILVPEMQLAIVDSLNKRLKFLADLTADLDLEQVELIHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +G++ +RE++D+ ARAVA M L+EYCLPLV+ GG F+A KG + E+ ++++
Sbjct: 128 RAEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLVKKGGQFLALKGPKAESELADAKK 187
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPK 275
A+ ++G + S++ +RT ++ K ++TPK
Sbjct: 188 AIAVLGGQITATKSLQLPESDEERTLILLNKVKQTPK 224
>gi|430834931|ref|ZP_19452933.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0679]
gi|430839240|ref|ZP_19457181.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0688]
gi|430859066|ref|ZP_19476684.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1552]
gi|430485000|gb|ELA61947.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0679]
gi|430490698|gb|ELA67194.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E0688]
gi|430544585|gb|ELA84614.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecium E1552]
Length = 237
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 17 LTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 66
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 67 FTQPFSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 123
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 124 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 183
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 184 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPTPKKYPRKPGLPNKQPI 236
>gi|270308089|ref|YP_003330147.1| methyltransferase [Dehalococcoides sp. VS]
gi|270153981|gb|ACZ61819.1| methyltransferase [Dehalococcoides sp. VS]
Length = 235
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
TL+ Q EQ Y L+ +N ++NLTA+ + +V +H DS++++
Sbjct: 14 TLSFVQLEQFETYYRELVDYNSRVNLTAITEYKDVQVKHFLDSVSLVL-----------V 62
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ K++DVG+GAG PGL L I PD ++ LLE+ K+ FL + L V+I+
Sbjct: 63 GIKGDEKILDVGSGAGFPGLPLKILFPDIQLGLLEATQKKARFLSEITAKLGLTGVEIIS 122
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE ++ +R++Y + +RAVA+M LAE LP +GG +A K D +EE+ +
Sbjct: 123 QRAEDAAQNPLYRQKYTLVTSRAVADMATLAELTLPFCALGGRVIAPKKSDIEEEMDRAN 182
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+ MG + ++ V R VV K TP YPR G PAK PL
Sbjct: 183 TAVKKMGGRVFEVIKVALPGLEDGRKLVVLEKISNTPALYPRRAGMPAKTPL 234
>gi|256846127|ref|ZP_05551585.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
gi|256719686|gb|EEU33241.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
Length = 232
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 132/224 (58%), Gaps = 22/224 (9%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ LL +N NLTA+++ ++E+H DSL + +K+ + L+D+G
Sbjct: 27 YLEILLDYNSHTNLTAIREEKTIIEKHFLDSLLLQNLLKDGDKT-----------LIDIG 75
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PG++LAI D K TLL+S+ K+ FLE + L NV+I+ GRAE + KD
Sbjct: 76 TGAGFPGMMLAIFNEDKKFTLLDSVRKKTDFLELVKNELNLKNVEIINGRAEEIIKDR-- 133
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASL 247
RE+YDV + R V+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +
Sbjct: 134 REKYDVGLCRGVSNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKI 190
Query: 248 LQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ E + PF R + LK+++T +KYPR G P K PL
Sbjct: 191 VK--EYEFKLPFSNEDRLIIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|336399880|ref|ZP_08580679.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
21_1A]
gi|336163520|gb|EGN66443.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
21_1A]
Length = 232
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 132/224 (58%), Gaps = 22/224 (9%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ LL +N NLTA+++ ++E+H DSL + +K+ + L+D+G
Sbjct: 27 YLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDEDET-----------LIDIG 75
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PG++LAI D K TLL+S+ K+ FLE S L NV+I+ GRAE + KD
Sbjct: 76 TGAGFPGMMLAIFNRDKKFTLLDSVRKKTDFLELIKSELNLKNVEIINGRAEEIIKDR-- 133
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASL 247
RE+YDV + R V+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +
Sbjct: 134 REKYDVGLCRGVSNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKI 190
Query: 248 LQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ + + PF R + LK+++T +KYPR G P K PL
Sbjct: 191 LK--EYKFKLPFSNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|425057770|ref|ZP_18461173.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 504]
gi|403039879|gb|EJY50994.1| 16S rRNA methyltransferase GidB [Enterococcus faecium 504]
Length = 242
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 15/233 (6%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q +Y L++WN KMNLTA+ D +V +H DSL T +
Sbjct: 22 LTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSL----------TLAFEVD 71
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IV 176
L DVG+GAG P + L IA P+ ++T+++S+NKR FL LT+LL + +
Sbjct: 72 FTQPFSLCDVGSGAGFPSIPLKIAFPELQITIVDSLNKRITFLSE---LTRLLGIDASLY 128
Query: 177 RGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNS 236
RAET G++ FR +D+ ARAVA + +LAE CLPL + G F A K +EE+ +
Sbjct: 129 HDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQEGYFYALKAAKSEEELTEA 188
Query: 237 ERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++A+ L+G L+ +V + QR +V K + TPKKYPR PG P K P+
Sbjct: 189 KQAIALLGGKFLKEEAVTLPNVSDQRHIIVIQKKKPTPKKYPRKPGLPNKQPI 241
>gi|335049906|ref|ZP_08542889.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 199-6]
gi|333762035|gb|EGL39551.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Megasphaera sp.
UPII 199-6]
Length = 237
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
++ +Q EQ + + L++ N+ MNLT + +EV +H+ DSL + + +
Sbjct: 16 SIQPQQMEQYTKFFEYLVEINKVMNLTKLTAPDEVALKHMADSL----------SCYDEE 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PG+ L I PD ++T +S+ KR F+ L Q+ +
Sbjct: 66 IFKVRATVLDLGTGAGFPGIPLKIYRPDLQLTFFDSLKKRLQFISCVTDLLQIKQTVCLH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE L +REQ+D+ +RAVA + +LAE+ LP V+ GG +A KG + E+K +E
Sbjct: 126 GRAEDLAHQDVYREQFDLVTSRAVARLSVLAEWALPYVKKGGYMIALKGARYETELKAAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RAV L+G ++ ++ V+ + R + K+ +P++YPR P + PL
Sbjct: 186 RAVSLLGGTVYRVRKVQLGNLPDTRAVIYIHKTHDSPRQYPRKPKVASAHPL 237
>gi|260424977|ref|ZP_05733847.2| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
gi|260403779|gb|EEW97326.1| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
Length = 244
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 142/259 (54%), Gaps = 24/259 (9%)
Query: 36 CPHRTRAKTLTTTRIVNSSHFETLNTRQQE----QIHLYVDALLQWNRKMNLTAVKDVNE 91
PH+ +T IV ETL E ++ Y ++ +RKMNLT +KD E
Sbjct: 1 MPHK--GDMMTVREIV-----ETLGLAADEDAVRKMAEYNAMVIAMSRKMNLTGIKDAEE 53
Query: 92 VMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLL 151
+ ++I DSL T + + N +++D+GTGAG PG+ LAI PD +V L+
Sbjct: 54 SLVKNIYDSL----------TVYEEKYFPKNGRMLDLGTGAGFPGIPLAILRPDMQVVLV 103
Query: 152 ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYC 211
+S+ K+ VF+E+A + + N++I+ RAE G+ RE +D+ ARAV + ++AE+
Sbjct: 104 DSVLKKLVFIENAAAKLGIKNIKILHIRAEEGGRRRKTRETFDMVTARAVKMLPVIAEWG 163
Query: 212 LPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KS 270
+P V+ GG+F A KG EE++ S + ++ + A L++ +E P G+R ++ K+
Sbjct: 164 IPFVKEGGIFAAMKGPGADEELRQSGKILKELKAELMERKELE--LPTGERRTILYFRKT 221
Query: 271 RRTPKKYPRDPGTPAKVPL 289
+PK YPR G K P+
Sbjct: 222 APSPKTYPRKVGVAEKKPI 240
>gi|342214530|ref|ZP_08707218.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. oral taxon 780 str. F0422]
gi|341592105|gb|EGS34994.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Veillonella
sp. oral taxon 780 str. F0422]
Length = 237
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q +Q+ + + ++ N MNLT + + E +H+ DSL+ P
Sbjct: 18 LTDTQIDQLQRFYEQVVTTNEHMNLTGITEPEEFALKHVVDSLSCYDP----------KY 67
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++D+GTGAG PG+ L I P ++TL +S+ KR FL+ + L +Q + G
Sbjct: 68 FTKGATVIDLGTGAGFPGVPLGIYDPSLQITLFDSLQKRLRFLDGVIEDLDLQGLQTLHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE L +RE +D+ +RAVA + IL E+ LP V+VGG VA KG QEE++ S+R
Sbjct: 128 RAEDLAHQ-EYRESFDLLTSRAVARLSILLEWGLPYVKVGGYMVALKGSIVQEELEESKR 186
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDP 281
AV ++G ++++ V + +R V K + T KKYPR P
Sbjct: 187 AVSILGGEIVEVKEVTLPTLEDKRAIVYIKKVKPTAKKYPRKP 229
>gi|113477232|ref|YP_723293.1| 16S rRNA methyltransferase GidB [Trichodesmium erythraeum IMS101]
gi|123056302|sp|Q10Y54.1|RSMG_TRIEI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110168280|gb|ABG52820.1| methyltransferase GidB [Trichodesmium erythraeum IMS101]
Length = 255
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 127/237 (53%), Gaps = 9/237 (3%)
Query: 57 ETLN----TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
ETLN Q++Q + ++ N+K+NLT + E E+H+ DSL I I +
Sbjct: 18 ETLNWQPTVEQKQQFQKLYELIILGNKKLNLTRITKPEEFWEKHLWDSLRGIKFILENKI 77
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
+ K++D+GTGAG PGL++AI P + VTLL+S K+ F+E+ ++ + N
Sbjct: 78 HWSEEK-----KVIDIGTGAGFPGLLVAIILPQYAVTLLDSTRKKISFIENILTDLNIKN 132
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ R E +G+ +RE YD+ + RAVA + AEY LPL+++GG+ + +G+ +E
Sbjct: 133 ALTITNRVEQIGRLFKYRETYDIGLLRAVASTVVCAEYALPLLKIGGIAILYRGNITTDE 192
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
N V+L+G + ++ ++ R + K +TP YPR G P + PL
Sbjct: 193 QANLPEVVKLLGGKIERIEEFKTPLSNSIRNCIYLRKVGKTPINYPRSVGVPNQKPL 249
>gi|290968162|ref|ZP_06559707.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
gi|290781837|gb|EFD94420.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
Length = 237
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
++ +Q EQ + + L++ N+ MNLT + +EV +H+ DSL + + +
Sbjct: 16 SIQPQQMEQYTKFFEYLVEINKVMNLTKLTAPDEVALKHMADSL----------SCYDEE 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
++D+GTGAG PG+ L I PD ++T +S+ KR F+ L Q+ +
Sbjct: 66 IFKVRATVLDLGTGAGFPGIPLKIYRPDLQLTFFDSLKKRLQFISCVTDLLQIKQTVCLH 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE L +REQ+D+ +RAVA + +LAE+ LP V+ GG +A KG + E+K +E
Sbjct: 126 GRAEDLAHQDVYREQFDLVTSRAVARLSVLAEWALPYVKKGGYMIALKGARYEMELKAAE 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
RAV L+G ++ ++ V+ + R + K+ +P++YPR P + PL
Sbjct: 186 RAVSLLGGTVYRVRKVQLGNLPDTRAVIYIRKTHDSPRQYPRKPKVASAHPL 237
>gi|416394296|ref|ZP_11686161.1| Glucose inhibited division protein [Crocosphaera watsonii WH 0003]
gi|357263300|gb|EHJ12326.1| Glucose inhibited division protein [Crocosphaera watsonii WH 0003]
Length = 241
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 12/230 (5%)
Query: 64 QEQIH----LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
QEQ+ LY + +L NR++NLT + + N+ E+H+ DSLA + I + ++ DS
Sbjct: 20 QEQLEQWEKLYQEIILI-NRQINLTRITEPNDFWEKHLWDSLAGV--IGLDFLNYEDS-- 74
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
LK+VD+GTGAG PGL ++I P W++TLL+S K+ ++ + +L N Q GR
Sbjct: 75 ---LKVVDIGTGAGFPGLPISIIFPHWQLTLLDSTRKKINVIKLFLEALKLNNSQTFIGR 131
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE +G REQYD+ + RAV E + AEY LP ++VGG+ V +G+ +EE N A
Sbjct: 132 AEDIGHIPEHREQYDLGLIRAVGEPSVCAEYVLPFLKVGGIGVLYRGNWQKEEEINLNNA 191
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +G L+ + E+ R + K P+ +PR G P + PL
Sbjct: 192 LKQLGGKLILVKQFETPLTKSIRHFIYVEKITNIPEYFPRPVGIPKQNPL 241
>gi|418139652|ref|ZP_12776478.1| methyltransferase GidB [Streptococcus pneumoniae GA13338]
gi|419523649|ref|ZP_14063226.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13723]
gi|353905125|gb|EHE80564.1| methyltransferase GidB [Streptococcus pneumoniae GA13338]
gi|379556824|gb|EHZ21872.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA13723]
Length = 254
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|417677020|ref|ZP_12326429.1| methyltransferase GidB [Streptococcus pneumoniae GA17545]
gi|332074619|gb|EGI85093.1| methyltransferase GidB [Streptococcus pneumoniae GA17545]
Length = 254
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|260495538|ref|ZP_05815663.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
gi|260196880|gb|EEW94402.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
Length = 232
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 132/224 (58%), Gaps = 22/224 (9%)
Query: 70 YVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVG 129
Y++ LL +N NLTA+++ ++E+H DSL + +K+ + L+D+G
Sbjct: 27 YLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDEDKT-----------LIDIG 75
Query: 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF 189
TGAG PG++LAI + K TLL+S+ K+ FLE + L NV+I+ GRAE + KD
Sbjct: 76 TGAGFPGMMLAIFNGNKKFTLLDSVRKKTDFLELVKTELNLKNVEIINGRAEEIIKDR-- 133
Query: 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK--GHDPQEEVKNSERAVQLMGASL 247
RE+YDV + R V+ + ++ EY +P ++V G F+ K G D EVKNS A++++ + +
Sbjct: 134 REKYDVGLCRGVSNLSVILEYEIPFLKVNGRFLPQKMVGTD---EVKNSSNALKVLNSKI 190
Query: 248 LQLCSVESQSPFG--QRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
L+ E + PF R + LK+++T +KYPR G P K PL
Sbjct: 191 LK--EYEFKLPFSNEDRLVIEILKTKKTDEKYPRKIGIPLKKPL 232
>gi|429736319|ref|ZP_19270223.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 138
str. F0429]
gi|429155389|gb|EKX98070.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 138
str. F0429]
Length = 240
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 10/231 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L Q Q ++Y + L++WN +MNLTA+ +V +HI DSL T++ +
Sbjct: 19 LTEEQVAQFNVYNELLVEWNERMNLTALTAPADVAVKHIIDSL----------TAYDTAL 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
++ L+DVGTGAGLPG+ LA+ P +VTL++++ KR FL L NV+ +
Sbjct: 69 FDAAQTLIDVGTGAGLPGIPLAVYAPHIEVTLMDALAKRVRFLTEVTRAMNLTNVRCIHA 128
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE + R YD+AV+RAVA M +L EY LP VR GG +A KG EE +
Sbjct: 129 RAEEEARQKEHRAHYDIAVSRAVARMPVLLEYTLPFVREGGSVLALKGRAYAEEAAEARG 188
Query: 239 AVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A + +G ++ V+ R + K R TPK YPR G P + PL
Sbjct: 189 AAERLGGGVITARPVQLPGLDDVRAILSVTKERPTPKAYPRRAGQPEQSPL 239
>gi|282896993|ref|ZP_06304995.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
gi|281197645|gb|EFA72539.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
Length = 252
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 9/237 (3%)
Query: 57 ETLN----TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYT 112
ETLN Q Q+ D ++ NR++NLT + E E+H+ DSL + P
Sbjct: 21 ETLNWQPTIEQGNQLQKLYDLIVVANRQINLTRITQPKEFWEKHLWDSLRGVSP-----E 75
Query: 113 SHCDSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN 172
H N+ ++D+G+GAG PGL + I P +VTLL++ K+ F+ A+ L N
Sbjct: 76 QHFLPELNAAGSIIDIGSGAGFPGLPIGIVFPHHQVTLLDATRKKVNFINSAIEKLPLSN 135
Query: 173 VQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEE 232
+ GRAE +G++ +RE+YD+AV RAV+ + AEY LPL++ GGL + +G QEE
Sbjct: 136 ATTILGRAEEIGQETLYREKYDLAVIRAVSTASVCAEYTLPLIKKGGLAIIYRGTWTQEE 195
Query: 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
+N E ++GA + + + R V K RT +PR G P + PL
Sbjct: 196 NQNLEHTANILGARIELVDRFTTPLTKSVRHCVYLRKVLRTSVSFPRPVGVPTQNPL 252
>gi|418230025|ref|ZP_12856628.1| methyltransferase GidB [Streptococcus pneumoniae EU-NP01]
gi|353887547|gb|EHE67325.1| methyltransferase GidB [Streptococcus pneumoniae EU-NP01]
Length = 254
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|419455665|ref|ZP_13995623.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP04]
gi|379628799|gb|EHZ93401.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae EU-NP04]
Length = 254
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|418080723|ref|ZP_12717935.1| methyltransferase GidB [Streptococcus pneumoniae 6735-05]
gi|353753263|gb|EHD33887.1| methyltransferase GidB [Streptococcus pneumoniae 6735-05]
Length = 254
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|421225162|ref|ZP_15681902.1| methyltransferase GidB, partial [Streptococcus pneumoniae 2070768]
gi|395589857|gb|EJG50173.1| methyltransferase GidB, partial [Streptococcus pneumoniae 2070768]
Length = 253
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|126659305|ref|ZP_01730441.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
gi|126619387|gb|EAZ90120.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
Length = 241
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 132/230 (57%), Gaps = 12/230 (5%)
Query: 64 QEQIH----LYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSC 119
QEQ+ LY + LL NR++NLT + + E E+H+ DSLA + I + ++ DS
Sbjct: 20 QEQLEKWEILYQEILLI-NRQINLTRITEPQEFWEKHLWDSLAGV--IGLDFLNYKDS-- 74
Query: 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR 179
LK++D+GTGAG PGL ++I P W++TLL+S K+ + + +L N Q V GR
Sbjct: 75 ---LKVIDIGTGAGFPGLPISIIFPHWQLTLLDSTQKKIKVINLFLEALKLSNSQTVVGR 131
Query: 180 AETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239
AE +G RE+YD+ + RAV E + AEY LP +++GG+ V +G+ +E N + A
Sbjct: 132 AEAIGHLPQHREKYDLGLIRAVGEPSVCAEYVLPFLKIGGIGVLYRGNWETQEEINLKAA 191
Query: 240 VQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
++ +G ++ + + + R + K TP+++PRD G P + PL
Sbjct: 192 LKKLGGKIILVKQLRTPLTKSVRHFIYIKKVVLTPEQFPRDVGIPKQKPL 241
>gi|418176098|ref|ZP_12812692.1| methyltransferase GidB [Streptococcus pneumoniae GA41437]
gi|353841537|gb|EHE21592.1| methyltransferase GidB [Streptococcus pneumoniae GA41437]
Length = 254
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|73748586|ref|YP_307825.1| 16S rRNA methyltransferase GidB [Dehalococcoides sp. CBDB1]
gi|123619642|sp|Q3ZXE0.1|RSMG_DEHSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|73660302|emb|CAI82909.1| methyltransferase GidB [Dehalococcoides sp. CBDB1]
Length = 235
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+LN+ Q Q Y L+ +N ++NLTA+ + +V +H DS++++ +
Sbjct: 14 SLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVL-----------A 62
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ KL+DVG+GAG PGL L I P ++ LLE+ K+ FL L V+I+
Sbjct: 63 GIKGDEKLLDVGSGAGFPGLPLKILFPAIQLGLLEATQKKARFLSEITVKLGLSGVEIIS 122
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE ++ +R++Y + +RAVA+M LAE LP VGG +A K D +EE+ +
Sbjct: 123 QRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPFCAVGGRVIAPKKGDIEEEMDRAA 182
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+ MG + ++ VE R V+ K TP YPR G PAK PL
Sbjct: 183 TAVKKMGGRVFKVIKVELPGLEDGRKLVLLEKISNTPALYPRRAGIPAKTPL 234
>gi|418123540|ref|ZP_12760473.1| methyltransferase GidB [Streptococcus pneumoniae GA44378]
gi|418128125|ref|ZP_12765020.1| methyltransferase GidB [Streptococcus pneumoniae NP170]
gi|418178300|ref|ZP_12814884.1| methyltransferase GidB [Streptococcus pneumoniae GA41565]
gi|353796886|gb|EHD77224.1| methyltransferase GidB [Streptococcus pneumoniae GA44378]
gi|353799556|gb|EHD79874.1| methyltransferase GidB [Streptococcus pneumoniae NP170]
gi|353845074|gb|EHE25117.1| methyltransferase GidB [Streptococcus pneumoniae GA41565]
Length = 254
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|418112631|ref|ZP_12749631.1| methyltransferase GidB [Streptococcus pneumoniae GA41538]
gi|418160012|ref|ZP_12796711.1| methyltransferase GidB [Streptococcus pneumoniae GA17227]
gi|353782993|gb|EHD63422.1| methyltransferase GidB [Streptococcus pneumoniae GA41538]
gi|353821745|gb|EHE01921.1| methyltransferase GidB [Streptococcus pneumoniae GA17227]
Length = 259
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|260893977|ref|YP_003240074.1| methyltransferase GidB [Ammonifex degensii KC4]
gi|260866118|gb|ACX53224.1| methyltransferase GidB [Ammonifex degensii KC4]
Length = 241
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 14/233 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+L QE++ + L W R+ +LTA++ E H DSLA + ++ +
Sbjct: 21 SLPPGAQEKMGRHFALLSLWGRRSSLTAIRGAEEAAILHYLDSLAPL-----AHLPPPEG 75
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
C +DVG+GAG PG+ LA+A P+ + LLE+ K+ FL + L N + V
Sbjct: 76 PC------IDVGSGAGFPGVPLALALPEVEFVLLEATRKKVEFLRRVIEEISLPNCRAVW 129
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
GRAE GK +RE + VARAVA +R LAEY LP VR+GG+F+A KG + E+ +
Sbjct: 130 GRAEEYGKIAGYRESFAWVVARAVAPLRELAEYTLPFVRLGGVFLAYKGPRGEAELAEAV 189
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCL-KSRRTPKKYPRDPGTPAKVPL 289
RA+ L+G + ++ + P G+R ++ + K TP YPR PG K PL
Sbjct: 190 RALSLLGGEVAEVW--QYFLPGGERRQLLVVRKVSPTPALYPRRPGLARKRPL 240
>gi|189039677|sp|A5FR82.2|RSMG_DEHSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 122/232 (52%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+LN+ Q Q Y L+ +N ++NLTA+ + +V +H DS++++ +
Sbjct: 14 SLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVL-----------A 62
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ KL+DVG+GAG PGL L I P ++ LLE+ K+ FL L V+I+
Sbjct: 63 GIKGDEKLLDVGSGAGFPGLPLKILFPAIQLGLLEATQKKARFLSEITVKLGLSGVEIIS 122
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE ++ +R++Y + +RAVA+M LAE LP +GG +A K D +EE+ +
Sbjct: 123 QRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPFCAIGGRVIAPKKGDIEEEMDRAA 182
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+ MG + ++ VE R V+ K TP YPR G PAK PL
Sbjct: 183 TAVKKMGGRVFKVIKVELPGLEDGRKLVLLEKISNTPALYPRRAGIPAKTPL 234
>gi|419534759|ref|ZP_14074260.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17457]
gi|379564107|gb|EHZ29104.1| 16S rRNA (guanine(527)-N(7))-methyltransferase GidB [Streptococcus
pneumoniae GA17457]
Length = 259
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 59 LNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSS 118
L+ +Q+EQ Y + L++WN K+NLTA+ D EV +H DS+A PI
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIA---PILQGLIP----- 68
Query: 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG 178
N +KL+D+G GAG P L + I P+ VT+++S+NKR FL+ L V G
Sbjct: 69 -NETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHG 127
Query: 179 RAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSER 238
RAE +D +FR QYD ARAVA M++L+E +P ++VGG +A K + EE+ ++
Sbjct: 128 RAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKN 187
Query: 239 AVQLM 243
A+ L+
Sbjct: 188 ALNLL 192
>gi|342733171|ref|YP_004772010.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456535|ref|YP_005669133.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417959468|ref|ZP_12602278.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-1]
gi|417961897|ref|ZP_12604214.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-2]
gi|417962766|ref|ZP_12604909.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-3]
gi|417968045|ref|ZP_12609092.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-co]
gi|418015428|ref|ZP_12654993.1| glucose inhibited division protein B [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373428|ref|ZP_12965517.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342330626|dbj|BAK57268.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505763|gb|EGX28057.1| glucose inhibited division protein B [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984881|dbj|BAK80557.1| 16S rRNA methyltransferase GidB [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380331826|gb|EIA22792.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-2]
gi|380333328|gb|EIA23941.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-1]
gi|380335665|gb|EIA25800.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-3]
gi|380340319|gb|EIA28929.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-co]
gi|380341264|gb|EIA29757.1| Ribosomal RNA small subunit methyltransferase G [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 233
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 128/232 (55%), Gaps = 15/232 (6%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+ + E+ ++Y++ L+++N+ +NLTA+++ +E++ RH DSL+I +
Sbjct: 17 NFSNQMYEKFNIYMEMLIEYNKNINLTAIRNRDEIVSRHFLDSLSIF-----------NY 65
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
N KL DVG+GAG PG+ + I D V L+ES++K+ FL + ++ L N++++
Sbjct: 66 KIKYNSKLCDVGSGAGFPGIPIKIIRGDINVDLIESISKKTKFLNNVITTLNLDNIRVIN 125
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
R E L + +RE+YD V+RA+A + L E PLV+V G ++A KG E+ +
Sbjct: 126 IRVEELAHNKIYREKYDYVVSRAMARLNELLELSFPLVKVNGKYIAFKGLKSMVELNEAI 185
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
A++++G + ++ P +V K +TP+ YPR+ AK L
Sbjct: 186 NAIRILGGEFENIINI----PEFNSNLIVINKVFKTPEFYPREYRLIAKKSL 233
>gi|289432612|ref|YP_003462485.1| methyltransferase GidB [Dehalococcoides sp. GT]
gi|288946332|gb|ADC74029.1| methyltransferase GidB [Dehalococcoides sp. GT]
Length = 256
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 11/232 (4%)
Query: 58 TLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDS 117
+LN+ Q Q Y L+ +N ++NLTA+ + +V +H DS++++ +
Sbjct: 35 SLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVL-----------A 83
Query: 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVR 177
+ KL+DVG+GAG PGL L I P ++ LLE+ K+ FL L V+I+
Sbjct: 84 GIKGDEKLLDVGSGAGFPGLPLKILFPAIQLGLLEATQKKARFLSEITVKLGLSGVEIIS 143
Query: 178 GRAETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSE 237
RAE ++ +R++Y + +RAVA+M LAE LP VGG +A K D +EE+ +
Sbjct: 144 QRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPFCAVGGRVIAPKKGDIEEEMDRAA 203
Query: 238 RAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289
AV+ MG + ++ VE R V+ K TP YPR G PAK PL
Sbjct: 204 TAVKKMGGRVFKVIKVELPGLEDGRKLVLLEKISNTPALYPRRAGIPAKTPL 255
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,282,018,743
Number of Sequences: 23463169
Number of extensions: 156850914
Number of successful extensions: 406985
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3391
Number of HSP's successfully gapped in prelim test: 481
Number of HSP's that attempted gapping in prelim test: 397835
Number of HSP's gapped (non-prelim): 3902
length of query: 289
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 148
effective length of database: 9,050,888,538
effective search space: 1339531503624
effective search space used: 1339531503624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)