Query 022962
Match_columns 289
No_of_seqs 300 out of 2722
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 14:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g89_A Ribosomal RNA small sub 100.0 1.2E-41 4.3E-46 301.4 23.0 228 51-289 21-248 (249)
2 1xdz_A Methyltransferase GIDB; 100.0 1.4E-36 4.6E-41 266.7 25.2 229 51-289 10-238 (240)
3 1jsx_A Glucose-inhibited divis 99.9 2.4E-26 8E-31 196.0 20.6 198 51-270 8-205 (207)
4 2b3t_A Protein methyltransfera 99.9 8.8E-24 3E-28 188.8 14.9 188 54-251 42-261 (276)
5 1nv8_A HEMK protein; class I a 99.9 2.8E-22 9.5E-27 180.4 7.3 194 37-237 33-261 (284)
6 3evz_A Methyltransferase; NYSG 99.8 4.7E-20 1.6E-24 159.5 17.8 148 120-275 54-225 (230)
7 3lpm_A Putative methyltransfer 99.8 8.6E-19 3E-23 154.9 19.4 144 121-270 49-219 (259)
8 3mti_A RRNA methylase; SAM-dep 99.8 2.6E-19 8.7E-24 149.7 15.1 144 121-270 22-184 (185)
9 4gek_A TRNA (CMO5U34)-methyltr 99.8 3.5E-18 1.2E-22 151.8 17.8 100 121-225 70-178 (261)
10 1yzh_A TRNA (guanine-N(7)-)-me 99.8 4.1E-18 1.4E-22 146.1 17.1 128 121-251 41-180 (214)
11 3dh0_A SAM dependent methyltra 99.8 2.6E-18 9E-23 147.0 15.7 143 121-271 37-194 (219)
12 3njr_A Precorrin-6Y methylase; 99.8 9.1E-18 3.1E-22 143.5 18.2 125 121-253 55-180 (204)
13 3eey_A Putative rRNA methylase 99.8 2.1E-18 7.3E-23 145.5 14.0 146 121-270 22-188 (197)
14 3e05_A Precorrin-6Y C5,15-meth 99.8 1.2E-17 4E-22 141.9 18.7 120 121-245 40-160 (204)
15 2ozv_A Hypothetical protein AT 99.8 4.9E-18 1.7E-22 150.5 16.2 148 121-273 36-215 (260)
16 2fca_A TRNA (guanine-N(7)-)-me 99.8 1E-17 3.5E-22 144.1 16.2 126 122-250 39-176 (213)
17 3dlc_A Putative S-adenosyl-L-m 99.8 1.1E-17 3.9E-22 142.3 15.1 124 124-251 46-201 (219)
18 1nt2_A Fibrillarin-like PRE-rR 99.7 8.3E-17 2.8E-21 138.3 19.2 142 121-268 57-207 (210)
19 3grz_A L11 mtase, ribosomal pr 99.7 3E-17 1E-21 139.4 16.2 121 122-251 61-183 (205)
20 4df3_A Fibrillarin-like rRNA/T 99.7 2.6E-17 8.9E-22 143.6 16.0 133 119-253 75-217 (233)
21 3kr9_A SAM-dependent methyltra 99.7 5.2E-17 1.8E-21 141.0 17.4 127 120-253 14-143 (225)
22 3f4k_A Putative methyltransfer 99.7 2.8E-17 9.4E-22 144.0 15.7 130 120-253 45-196 (257)
23 3mgg_A Methyltransferase; NYSG 99.7 2.2E-17 7.7E-22 146.4 15.1 131 121-254 37-199 (276)
24 3lec_A NADB-rossmann superfami 99.7 7.2E-17 2.5E-21 140.4 17.7 127 120-253 20-149 (230)
25 3kkz_A Uncharacterized protein 99.7 2.3E-17 7.9E-22 145.9 14.9 129 121-253 46-196 (267)
26 1fbn_A MJ fibrillarin homologu 99.7 5.6E-17 1.9E-21 140.7 16.9 145 121-270 74-228 (230)
27 1nkv_A Hypothetical protein YJ 99.7 1.7E-17 5.9E-22 145.3 13.7 126 121-251 36-185 (256)
28 1vl5_A Unknown conserved prote 99.7 2.3E-17 7.8E-22 145.2 14.4 128 121-253 37-190 (260)
29 4dzr_A Protein-(glutamine-N5) 99.7 1.2E-18 4E-23 148.0 5.9 143 121-271 30-206 (215)
30 3gnl_A Uncharacterized protein 99.7 1.3E-16 4.4E-21 139.9 18.4 127 120-253 20-149 (244)
31 2frn_A Hypothetical protein PH 99.7 3.7E-17 1.3E-21 146.3 15.3 125 120-249 124-253 (278)
32 3dtn_A Putative methyltransfer 99.7 3.1E-17 1.1E-21 141.9 14.1 99 121-225 44-148 (234)
33 3fpf_A Mtnas, putative unchara 99.7 1.4E-17 4.9E-22 149.8 12.2 144 118-270 119-264 (298)
34 3hm2_A Precorrin-6Y C5,15-meth 99.7 8.9E-17 3E-21 132.8 16.0 127 121-252 25-152 (178)
35 1xxl_A YCGJ protein; structura 99.7 4.9E-17 1.7E-21 141.7 14.3 128 121-253 21-174 (239)
36 1y8c_A S-adenosylmethionine-de 99.7 1.7E-16 5.8E-21 137.5 16.6 96 122-224 38-141 (246)
37 3g07_A 7SK snRNA methylphospha 99.7 3.6E-17 1.2E-21 147.2 12.4 150 121-270 46-287 (292)
38 3g2m_A PCZA361.24; SAM-depende 99.7 1.5E-16 5.2E-21 143.1 16.5 98 122-225 83-190 (299)
39 3e23_A Uncharacterized protein 99.7 1.4E-16 4.9E-21 135.7 15.4 138 121-270 43-201 (211)
40 3e8s_A Putative SAM dependent 99.7 6.4E-17 2.2E-21 138.3 12.8 128 122-257 53-213 (227)
41 3id6_C Fibrillarin-like rRNA/T 99.7 2E-16 6.9E-21 138.0 16.1 145 120-269 75-230 (232)
42 3dxy_A TRNA (guanine-N(7)-)-me 99.7 4.4E-17 1.5E-21 140.9 11.6 106 122-227 35-152 (218)
43 3hem_A Cyclopropane-fatty-acyl 99.7 2E-16 6.9E-21 142.5 16.2 126 121-253 72-243 (302)
44 3vc1_A Geranyl diphosphate 2-C 99.7 9.8E-17 3.4E-21 145.3 14.2 131 119-253 115-269 (312)
45 2ipx_A RRNA 2'-O-methyltransfe 99.7 2.4E-16 8.2E-21 136.8 16.0 131 121-253 77-217 (233)
46 3bus_A REBM, methyltransferase 99.7 3E-16 1E-20 138.7 16.9 129 121-253 61-216 (273)
47 3cgg_A SAM-dependent methyltra 99.7 2.4E-16 8.2E-21 131.4 14.8 122 121-252 46-174 (195)
48 1yb2_A Hypothetical protein TA 99.7 3E-16 1E-20 139.8 16.2 126 120-252 109-236 (275)
49 2nxc_A L11 mtase, ribosomal pr 99.7 1.4E-16 4.9E-21 140.6 14.0 134 120-269 119-254 (254)
50 3h2b_A SAM-dependent methyltra 99.7 2.1E-16 7.3E-21 133.7 14.5 122 122-253 42-182 (203)
51 3sm3_A SAM-dependent methyltra 99.7 3.7E-16 1.3E-20 134.4 16.2 138 120-262 29-216 (235)
52 2yxd_A Probable cobalt-precorr 99.7 5.5E-16 1.9E-20 128.1 16.6 121 121-251 35-155 (183)
53 3gu3_A Methyltransferase; alph 99.7 1.2E-16 4.2E-21 142.8 13.4 101 121-226 22-127 (284)
54 3p2e_A 16S rRNA methylase; met 99.7 9.4E-17 3.2E-21 139.4 12.2 132 121-254 24-186 (225)
55 3a27_A TYW2, uncharacterized p 99.7 1.7E-16 5.7E-21 141.6 14.0 104 119-226 117-220 (272)
56 2ex4_A Adrenal gland protein A 99.7 9.7E-17 3.3E-21 139.7 12.1 129 121-253 79-225 (241)
57 4htf_A S-adenosylmethionine-de 99.7 3.7E-16 1.3E-20 139.3 16.1 128 122-253 69-232 (285)
58 1pjz_A Thiopurine S-methyltran 99.7 2.2E-17 7.5E-22 140.9 7.5 129 121-254 22-177 (203)
59 3jwg_A HEN1, methyltransferase 99.7 1.1E-15 3.6E-20 131.0 18.1 101 122-225 30-141 (219)
60 3ujc_A Phosphoethanolamine N-m 99.7 3.9E-16 1.3E-20 136.9 15.6 127 121-253 55-206 (266)
61 3jwh_A HEN1; methyltransferase 99.7 2E-16 6.9E-21 135.4 13.4 101 122-225 30-141 (217)
62 3p9n_A Possible methyltransfer 99.7 1.2E-16 3.9E-21 134.3 11.6 104 122-227 45-155 (189)
63 2pwy_A TRNA (adenine-N(1)-)-me 99.7 8.5E-16 2.9E-20 134.6 17.6 127 120-252 95-223 (258)
64 3ocj_A Putative exported prote 99.7 1.6E-16 5.6E-21 143.4 13.3 142 120-269 117-303 (305)
65 3ckk_A TRNA (guanine-N(7)-)-me 99.7 2.4E-16 8.3E-21 137.7 13.9 121 121-244 46-185 (235)
66 3lcc_A Putative methyl chlorid 99.7 5.2E-16 1.8E-20 134.4 15.8 127 122-254 67-208 (235)
67 3mb5_A SAM-dependent methyltra 99.7 3.6E-16 1.2E-20 137.1 14.6 124 121-251 93-220 (255)
68 1xtp_A LMAJ004091AAA; SGPP, st 99.7 2.7E-16 9.3E-21 137.3 13.7 127 121-253 93-238 (254)
69 2p7i_A Hypothetical protein; p 99.7 2.1E-16 7.3E-21 136.8 12.9 123 122-254 43-200 (250)
70 3g5l_A Putative S-adenosylmeth 99.7 2.3E-16 7.9E-21 138.1 13.2 97 121-224 44-144 (253)
71 2o57_A Putative sarcosine dime 99.7 3.7E-16 1.3E-20 140.1 14.8 129 121-253 82-234 (297)
72 1dus_A MJ0882; hypothetical pr 99.7 7E-16 2.4E-20 128.5 15.5 115 121-243 52-173 (194)
73 1ve3_A Hypothetical protein PH 99.7 1.2E-15 4.2E-20 130.7 17.4 98 122-225 39-142 (227)
74 2kw5_A SLR1183 protein; struct 99.7 7.9E-16 2.7E-20 130.0 15.9 131 121-260 30-178 (202)
75 3tfw_A Putative O-methyltransf 99.7 1.7E-15 5.8E-20 133.1 18.3 104 121-224 63-169 (248)
76 1l3i_A Precorrin-6Y methyltran 99.7 9E-16 3.1E-20 127.6 15.7 121 121-248 33-155 (192)
77 3bwc_A Spermidine synthase; SA 99.7 6.2E-16 2.1E-20 140.2 15.7 148 122-270 96-258 (304)
78 3mq2_A 16S rRNA methyltransfer 99.7 9.4E-17 3.2E-21 137.6 9.7 130 121-254 27-185 (218)
79 3hnr_A Probable methyltransfer 99.7 6.2E-16 2.1E-20 132.3 14.7 137 121-274 45-215 (220)
80 3pfg_A N-methyltransferase; N, 99.7 5E-16 1.7E-20 136.8 14.1 92 122-224 51-150 (263)
81 3orh_A Guanidinoacetate N-meth 99.7 5.9E-17 2E-21 141.5 7.9 128 121-251 60-208 (236)
82 3dr5_A Putative O-methyltransf 99.7 3.5E-16 1.2E-20 135.4 12.7 101 122-223 57-161 (221)
83 3adn_A Spermidine synthase; am 99.7 1.3E-15 4.5E-20 137.5 16.9 146 122-270 84-245 (294)
84 3d2l_A SAM-dependent methyltra 99.7 1.2E-15 4.1E-20 132.1 16.0 94 122-223 34-135 (243)
85 4fsd_A Arsenic methyltransfera 99.7 8E-16 2.7E-20 143.6 15.7 132 121-252 83-250 (383)
86 3ntv_A MW1564 protein; rossman 99.7 3.6E-16 1.2E-20 135.9 12.4 101 121-223 71-174 (232)
87 3l8d_A Methyltransferase; stru 99.7 8.7E-16 3E-20 133.1 14.2 126 121-254 53-201 (242)
88 1g8a_A Fibrillarin-like PRE-rR 99.7 2.7E-15 9.2E-20 129.4 16.9 144 121-269 73-226 (227)
89 2ift_A Putative methylase HI07 99.7 5.8E-16 2E-20 131.8 12.4 105 122-228 54-166 (201)
90 2vdv_E TRNA (guanine-N(7)-)-me 99.7 1.4E-15 4.9E-20 133.2 15.1 122 121-245 49-191 (246)
91 2yqz_A Hypothetical protein TT 99.7 1E-15 3.5E-20 134.1 13.8 99 121-225 39-141 (263)
92 3b3j_A Histone-arginine methyl 99.7 3.9E-17 1.3E-21 156.9 5.0 155 64-225 88-263 (480)
93 3ccf_A Cyclopropane-fatty-acyl 99.7 9.4E-16 3.2E-20 136.4 13.7 123 121-254 57-211 (279)
94 1kpg_A CFA synthase;, cyclopro 99.7 1.5E-15 5E-20 135.5 14.9 126 121-253 64-228 (287)
95 1o54_A SAM-dependent O-methylt 99.7 1.8E-15 6.2E-20 134.7 15.3 124 121-251 112-237 (277)
96 2esr_A Methyltransferase; stru 99.7 5.8E-16 2E-20 128.3 11.0 104 121-227 31-140 (177)
97 3m33_A Uncharacterized protein 99.6 6.9E-16 2.4E-20 133.3 11.7 119 121-253 48-167 (226)
98 3i9f_A Putative type 11 methyl 99.6 2.1E-15 7.3E-20 123.9 14.0 133 121-273 17-163 (170)
99 3u81_A Catechol O-methyltransf 99.6 3.5E-15 1.2E-19 128.5 15.9 102 122-224 59-169 (221)
100 2xvm_A Tellurite resistance pr 99.6 1.8E-15 6.3E-20 126.9 13.8 99 121-225 32-136 (199)
101 2gb4_A Thiopurine S-methyltran 99.6 9.7E-16 3.3E-20 135.3 12.6 126 121-254 68-228 (252)
102 1zx0_A Guanidinoacetate N-meth 99.6 3.1E-16 1.1E-20 136.3 9.2 122 121-247 60-204 (236)
103 3tma_A Methyltransferase; thum 99.6 2.2E-15 7.7E-20 139.0 15.5 140 119-269 201-353 (354)
104 2a14_A Indolethylamine N-methy 99.6 5.3E-16 1.8E-20 137.3 10.7 132 121-253 55-238 (263)
105 3duw_A OMT, O-methyltransferas 99.6 3.9E-15 1.3E-19 127.9 15.8 104 121-224 58-166 (223)
106 1i9g_A Hypothetical protein RV 99.6 6.4E-15 2.2E-19 130.8 17.6 124 121-250 99-227 (280)
107 1inl_A Spermidine synthase; be 99.6 5.2E-15 1.8E-19 133.6 17.0 146 122-270 91-252 (296)
108 2fk8_A Methoxy mycolic acid sy 99.6 2.3E-15 7.8E-20 136.4 14.4 98 121-225 90-194 (318)
109 2igt_A SAM dependent methyltra 99.6 1.7E-15 5.8E-20 139.0 13.6 135 121-258 153-308 (332)
110 1qzz_A RDMB, aclacinomycin-10- 99.6 8.8E-15 3E-19 135.4 18.6 147 119-271 180-357 (374)
111 1ri5_A MRNA capping enzyme; me 99.6 3.2E-15 1.1E-19 133.3 15.1 102 121-225 64-174 (298)
112 2fhp_A Methylase, putative; al 99.6 1.4E-15 4.7E-20 126.6 11.4 106 121-227 44-156 (187)
113 3g5t_A Trans-aconitate 3-methy 99.6 1.7E-15 6E-20 136.1 12.7 103 121-223 36-147 (299)
114 2pt6_A Spermidine synthase; tr 99.6 2.7E-15 9.4E-20 137.0 14.1 146 122-270 117-277 (321)
115 3r3h_A O-methyltransferase, SA 99.6 4.9E-16 1.7E-20 136.3 8.7 104 121-224 60-169 (242)
116 2p35_A Trans-aconitate 2-methy 99.6 2.6E-15 8.9E-20 131.4 13.2 97 121-226 33-133 (259)
117 3tr6_A O-methyltransferase; ce 99.6 9.3E-16 3.2E-20 131.9 10.0 103 122-224 65-173 (225)
118 1ixk_A Methyltransferase; open 99.6 3.3E-15 1.1E-19 136.0 14.1 129 119-250 116-272 (315)
119 1mjf_A Spermidine synthase; sp 99.6 4.8E-15 1.7E-19 132.8 14.9 143 122-270 76-239 (281)
120 3q7e_A Protein arginine N-meth 99.6 7.3E-16 2.5E-20 142.3 9.7 98 121-223 66-171 (349)
121 3ege_A Putative methyltransfer 99.6 6.2E-16 2.1E-20 136.5 8.8 123 121-256 34-181 (261)
122 3dli_A Methyltransferase; PSI- 99.6 2.9E-15 9.8E-20 130.3 12.8 122 121-253 41-184 (240)
123 3ou2_A SAM-dependent methyltra 99.6 6.8E-15 2.3E-19 125.2 14.8 95 121-225 46-146 (218)
124 3bxo_A N,N-dimethyltransferase 99.6 4.2E-15 1.4E-19 128.4 13.6 92 122-224 41-140 (239)
125 3m70_A Tellurite resistance pr 99.6 3.9E-15 1.3E-19 132.8 13.7 98 121-225 120-223 (286)
126 1iy9_A Spermidine synthase; ro 99.6 6.8E-15 2.3E-19 131.5 15.1 146 122-270 76-236 (275)
127 3k6r_A Putative transferase PH 99.6 3.4E-15 1.2E-19 133.5 12.9 125 119-248 123-252 (278)
128 1ws6_A Methyltransferase; stru 99.6 1.1E-15 3.6E-20 125.3 8.9 103 122-227 42-149 (171)
129 2zfu_A Nucleomethylin, cerebra 99.6 2.3E-15 7.9E-20 128.5 11.4 131 121-279 67-200 (215)
130 3lbf_A Protein-L-isoaspartate 99.6 2.6E-15 8.9E-20 127.7 11.6 101 120-227 76-176 (210)
131 2fpo_A Methylase YHHF; structu 99.6 3.1E-15 1E-19 127.4 11.9 102 122-226 55-161 (202)
132 1x19_A CRTF-related protein; m 99.6 1.1E-14 3.9E-19 134.3 16.4 128 120-253 189-348 (359)
133 2r3s_A Uncharacterized protein 99.6 1E-14 3.6E-19 132.7 15.9 128 120-252 164-322 (335)
134 2g72_A Phenylethanolamine N-me 99.6 4.2E-15 1.4E-19 132.9 13.0 149 121-270 71-279 (289)
135 1uir_A Polyamine aminopropyltr 99.6 2.8E-15 9.4E-20 136.5 11.8 146 122-270 78-242 (314)
136 2i62_A Nicotinamide N-methyltr 99.6 9.5E-15 3.2E-19 128.1 14.8 131 122-253 57-239 (265)
137 2yx1_A Hypothetical protein MJ 99.6 5E-15 1.7E-19 136.0 13.5 122 120-253 194-317 (336)
138 4hg2_A Methyltransferase type 99.6 1.1E-15 3.9E-20 135.3 8.7 93 122-225 40-135 (257)
139 3q87_B N6 adenine specific DNA 99.6 6.8E-15 2.3E-19 121.9 12.7 126 122-271 24-163 (170)
140 2qm3_A Predicted methyltransfe 99.6 1.8E-14 6.1E-19 134.0 17.0 128 121-251 172-307 (373)
141 3c3p_A Methyltransferase; NP_9 99.6 2.3E-15 7.9E-20 128.4 10.1 100 122-224 57-159 (210)
142 3bkw_A MLL3908 protein, S-aden 99.6 6.3E-15 2.1E-19 127.6 12.9 98 121-225 43-144 (243)
143 3ofk_A Nodulation protein S; N 99.6 1.3E-14 4.6E-19 123.7 14.8 97 121-225 51-154 (216)
144 2gpy_A O-methyltransferase; st 99.6 5E-15 1.7E-19 128.3 12.2 103 122-224 55-159 (233)
145 2b25_A Hypothetical protein; s 99.6 2.1E-14 7.1E-19 131.4 16.7 121 121-245 105-237 (336)
146 1sui_A Caffeoyl-COA O-methyltr 99.6 1.7E-15 5.9E-20 133.2 8.9 103 122-224 80-189 (247)
147 4dcm_A Ribosomal RNA large sub 99.6 5.2E-15 1.8E-19 137.9 12.6 103 121-227 222-336 (375)
148 3dp7_A SAM-dependent methyltra 99.6 8.8E-15 3E-19 135.5 14.1 143 121-270 179-355 (363)
149 3fzg_A 16S rRNA methylase; met 99.6 9.1E-16 3.1E-20 129.2 6.5 98 121-224 49-151 (200)
150 4hc4_A Protein arginine N-meth 99.6 1.2E-15 4.2E-20 141.9 7.9 95 122-222 84-186 (376)
151 2aot_A HMT, histamine N-methyl 99.6 9.1E-15 3.1E-19 131.1 13.4 130 121-250 52-218 (292)
152 3m4x_A NOL1/NOP2/SUN family pr 99.6 1.6E-14 5.3E-19 137.6 15.7 130 119-250 103-260 (456)
153 2p8j_A S-adenosylmethionine-de 99.6 4.7E-15 1.6E-19 125.6 10.9 100 121-225 23-128 (209)
154 1tw3_A COMT, carminomycin 4-O- 99.6 4.1E-14 1.4E-18 130.3 18.1 146 119-270 181-356 (360)
155 3uwp_A Histone-lysine N-methyl 99.6 3.9E-15 1.3E-19 139.0 11.2 106 118-224 170-287 (438)
156 2h00_A Methyltransferase 10 do 99.6 2.1E-14 7.1E-19 125.9 15.2 131 121-253 65-238 (254)
157 3ajd_A Putative methyltransfer 99.6 5E-15 1.7E-19 132.1 11.3 107 120-226 82-212 (274)
158 3bkx_A SAM-dependent methyltra 99.6 4.5E-15 1.5E-19 131.3 10.9 130 121-253 43-219 (275)
159 1wzn_A SAM-dependent methyltra 99.6 8.9E-15 3E-19 127.7 12.2 96 122-224 42-144 (252)
160 2fyt_A Protein arginine N-meth 99.6 1.5E-14 5.3E-19 132.9 14.0 97 121-222 64-168 (340)
161 3gwz_A MMCR; methyltransferase 99.6 5.3E-14 1.8E-18 130.5 17.5 140 120-269 201-368 (369)
162 2yvl_A TRMI protein, hypotheti 99.6 2E-14 6.9E-19 125.0 13.7 120 121-249 91-211 (248)
163 3i53_A O-methyltransferase; CO 99.6 4.9E-14 1.7E-18 128.6 16.5 127 121-253 169-321 (332)
164 3mcz_A O-methyltransferase; ad 99.6 5.3E-14 1.8E-18 129.2 16.8 139 122-270 180-349 (352)
165 2y1w_A Histone-arginine methyl 99.6 1.8E-14 6.2E-19 132.8 13.6 98 121-224 50-154 (348)
166 3ggd_A SAM-dependent methyltra 99.6 1.1E-14 3.6E-19 126.8 11.3 100 121-225 56-163 (245)
167 1wy7_A Hypothetical protein PH 99.6 4.9E-14 1.7E-18 119.5 15.1 122 121-254 49-176 (207)
168 3tm4_A TRNA (guanine N2-)-meth 99.6 3.6E-14 1.2E-18 132.0 15.5 142 119-274 215-369 (373)
169 2pxx_A Uncharacterized protein 99.6 9.1E-15 3.1E-19 123.9 10.4 101 121-227 42-161 (215)
170 3r0q_C Probable protein argini 99.6 3.2E-15 1.1E-19 139.3 8.2 97 121-223 63-167 (376)
171 2b2c_A Spermidine synthase; be 99.6 3.2E-14 1.1E-18 129.5 14.6 146 122-270 109-269 (314)
172 2yxe_A Protein-L-isoaspartate 99.6 1.6E-14 5.4E-19 123.3 11.3 104 120-228 76-180 (215)
173 3dmg_A Probable ribosomal RNA 99.6 1.6E-14 5.4E-19 134.9 12.2 101 121-227 233-342 (381)
174 2pbf_A Protein-L-isoaspartate 99.6 1E-14 3.5E-19 125.6 10.1 102 121-227 80-195 (227)
175 3bzb_A Uncharacterized protein 99.6 1.9E-14 6.4E-19 128.8 12.1 163 79-251 42-235 (281)
176 2i7c_A Spermidine synthase; tr 99.6 4.8E-14 1.6E-18 126.4 14.7 146 122-270 79-239 (283)
177 3cbg_A O-methyltransferase; cy 99.6 9E-15 3.1E-19 127.1 9.7 103 122-224 73-181 (232)
178 2plw_A Ribosomal RNA methyltra 99.6 5.7E-14 1.9E-18 118.4 14.4 94 121-225 22-154 (201)
179 3c3y_A Pfomt, O-methyltransfer 99.6 1.3E-14 4.4E-19 126.7 10.5 103 122-224 71-180 (237)
180 3gjy_A Spermidine synthase; AP 99.6 3.3E-14 1.1E-18 129.2 13.6 121 123-244 91-220 (317)
181 2hnk_A SAM-dependent O-methylt 99.6 1E-14 3.4E-19 127.0 9.8 104 122-225 61-181 (239)
182 2avd_A Catechol-O-methyltransf 99.6 8.6E-15 2.9E-19 126.1 9.2 103 122-224 70-178 (229)
183 1uwv_A 23S rRNA (uracil-5-)-me 99.6 1.1E-13 3.8E-18 131.2 17.6 144 120-269 285-431 (433)
184 3gdh_A Trimethylguanosine synt 99.6 9.9E-16 3.4E-20 133.2 3.2 96 122-223 79-179 (241)
185 2b78_A Hypothetical protein SM 99.6 4.3E-14 1.5E-18 132.1 14.4 108 120-228 211-334 (385)
186 2vdw_A Vaccinia virus capping 99.5 1.5E-14 5E-19 131.0 10.6 104 121-226 48-170 (302)
187 1xj5_A Spermidine synthase 1; 99.5 6.9E-14 2.4E-18 128.3 15.1 148 121-270 120-283 (334)
188 1i1n_A Protein-L-isoaspartate 99.5 2E-14 6.8E-19 123.7 10.7 102 121-227 77-184 (226)
189 3cc8_A Putative methyltransfer 99.5 5.2E-14 1.8E-18 120.3 13.1 124 121-254 32-186 (230)
190 1dl5_A Protein-L-isoaspartate 99.5 1.9E-14 6.6E-19 130.8 10.8 102 121-227 75-177 (317)
191 2o07_A Spermidine synthase; st 99.5 9.1E-14 3.1E-18 125.9 15.2 146 122-270 96-256 (304)
192 2pjd_A Ribosomal RNA small sub 99.5 1.5E-14 5.3E-19 132.9 10.1 101 121-227 196-305 (343)
193 2ip2_A Probable phenazine-spec 99.5 6.1E-14 2.1E-18 127.9 13.9 136 123-269 169-333 (334)
194 1ej0_A FTSJ; methyltransferase 99.5 6.7E-14 2.3E-18 114.3 12.7 132 121-270 22-178 (180)
195 1wxx_A TT1595, hypothetical pr 99.5 5.1E-14 1.7E-18 131.4 13.5 125 121-247 209-350 (382)
196 1o9g_A RRNA methyltransferase; 99.5 3.7E-15 1.3E-19 130.7 5.2 103 122-224 52-213 (250)
197 1u2z_A Histone-lysine N-methyl 99.5 2.8E-14 9.7E-19 134.9 11.5 106 119-225 240-359 (433)
198 4dmg_A Putative uncharacterize 99.5 1.4E-13 4.9E-18 128.8 16.2 126 120-250 213-354 (393)
199 3c0k_A UPF0064 protein YCCW; P 99.5 8.9E-14 3E-18 130.3 14.7 130 120-250 219-367 (396)
200 3thr_A Glycine N-methyltransfe 99.5 4.1E-14 1.4E-18 126.3 11.8 102 122-225 58-175 (293)
201 3iv6_A Putative Zn-dependent a 99.5 1.9E-14 6.5E-19 127.6 9.4 97 121-226 45-149 (261)
202 1vlm_A SAM-dependent methyltra 99.5 4.8E-14 1.6E-18 120.9 11.5 116 122-253 48-188 (219)
203 1g6q_1 HnRNP arginine N-methyl 99.5 5.1E-14 1.7E-18 128.7 12.3 96 122-222 39-142 (328)
204 3m6w_A RRNA methylase; rRNA me 99.5 2E-13 6.8E-18 130.2 16.6 128 120-250 100-256 (464)
205 2gs9_A Hypothetical protein TT 99.5 3.2E-14 1.1E-18 120.9 9.8 92 122-226 37-133 (211)
206 1jg1_A PIMT;, protein-L-isoasp 99.5 5.1E-14 1.7E-18 122.2 11.2 103 119-227 89-191 (235)
207 1ne2_A Hypothetical protein TA 99.5 1.3E-13 4.5E-18 116.4 12.8 113 122-253 52-170 (200)
208 2yxl_A PH0851 protein, 450AA l 99.5 3.3E-13 1.1E-17 128.5 16.9 131 118-250 256-416 (450)
209 2nyu_A Putative ribosomal RNA 99.5 1.5E-13 5.2E-18 115.2 12.9 95 121-226 22-146 (196)
210 2as0_A Hypothetical protein PH 99.5 2.7E-13 9.1E-18 127.0 15.9 126 121-247 217-360 (396)
211 1vbf_A 231AA long hypothetical 99.5 6.5E-14 2.2E-18 120.7 10.9 98 121-227 70-167 (231)
212 3bgv_A MRNA CAP guanine-N7 met 99.5 1.3E-13 4.4E-18 124.7 13.2 104 122-226 35-156 (313)
213 3opn_A Putative hemolysin; str 99.5 4.3E-15 1.5E-19 129.6 2.9 142 122-270 38-202 (232)
214 3v97_A Ribosomal RNA large sub 99.5 6.4E-14 2.2E-18 140.2 11.6 125 121-251 539-680 (703)
215 2dul_A N(2),N(2)-dimethylguano 99.5 3.7E-14 1.3E-18 132.2 9.2 102 122-225 48-164 (378)
216 1r18_A Protein-L-isoaspartate( 99.5 3.8E-14 1.3E-18 122.3 8.6 103 120-227 83-196 (227)
217 2cmg_A Spermidine synthase; tr 99.5 1.5E-13 5.1E-18 122.0 12.5 138 122-270 73-216 (262)
218 3hp7_A Hemolysin, putative; st 99.5 8.4E-14 2.9E-18 125.1 10.8 143 121-269 85-249 (291)
219 3dou_A Ribosomal RNA large sub 99.5 3.5E-13 1.2E-17 113.9 13.9 114 121-250 25-161 (191)
220 4a6d_A Hydroxyindole O-methylt 99.5 4.7E-13 1.6E-17 123.5 15.0 140 120-270 178-346 (353)
221 3bt7_A TRNA (uracil-5-)-methyl 99.5 2.6E-13 8.9E-18 126.0 13.3 141 122-269 214-368 (369)
222 2bm8_A Cephalosporin hydroxyla 99.5 5.1E-14 1.7E-18 122.9 7.8 96 122-224 82-186 (236)
223 1p91_A Ribosomal RNA large sub 99.5 6.2E-14 2.1E-18 123.7 8.5 94 122-226 86-179 (269)
224 4e2x_A TCAB9; kijanose, tetron 99.5 7.9E-14 2.7E-18 131.0 9.3 139 121-271 107-268 (416)
225 2frx_A Hypothetical protein YE 99.5 1.8E-13 6.3E-18 131.2 11.9 104 121-226 117-247 (479)
226 3axs_A Probable N(2),N(2)-dime 99.5 7.3E-14 2.5E-18 130.6 8.7 102 122-225 53-158 (392)
227 2avn_A Ubiquinone/menaquinone 99.5 2.1E-13 7.3E-18 120.0 10.7 94 122-226 55-153 (260)
228 2f8l_A Hypothetical protein LM 99.5 4.4E-13 1.5E-17 123.2 13.1 142 122-272 131-307 (344)
229 2qe6_A Uncharacterized protein 99.5 6.4E-13 2.2E-17 118.5 13.6 102 122-226 78-197 (274)
230 1af7_A Chemotaxis receptor met 99.5 1.3E-13 4.5E-18 123.1 8.9 103 122-226 106-253 (274)
231 1sqg_A SUN protein, FMU protei 99.5 1.6E-12 5.3E-17 123.1 16.4 106 119-226 244-375 (429)
232 2jjq_A Uncharacterized RNA met 99.4 2.1E-12 7.2E-17 122.1 16.5 131 120-265 289-422 (425)
233 3htx_A HEN1; HEN1, small RNA m 99.4 7.5E-13 2.6E-17 132.2 12.0 101 121-225 721-834 (950)
234 3lst_A CALO1 methyltransferase 99.4 9.9E-13 3.4E-17 120.9 11.3 125 119-252 182-335 (348)
235 3reo_A (ISO)eugenol O-methyltr 99.4 1.8E-12 6.2E-17 120.2 13.0 121 120-253 202-355 (368)
236 2xyq_A Putative 2'-O-methyl tr 99.4 1.1E-12 3.8E-17 117.9 11.1 109 121-251 63-195 (290)
237 3sso_A Methyltransferase; macr 99.4 5.6E-13 1.9E-17 124.1 8.1 95 121-224 216-323 (419)
238 1fp2_A Isoflavone O-methyltran 99.4 2.6E-12 8.9E-17 118.2 12.0 119 121-252 188-340 (352)
239 1fp1_D Isoliquiritigenin 2'-O- 99.4 2.7E-12 9.2E-17 119.0 11.5 121 120-253 208-360 (372)
240 3k0b_A Predicted N6-adenine-sp 99.4 4.3E-12 1.5E-16 118.8 12.5 108 118-229 198-354 (393)
241 3p9c_A Caffeic acid O-methyltr 99.4 4.9E-12 1.7E-16 117.2 12.6 121 120-253 200-353 (364)
242 2ih2_A Modification methylase 99.3 5E-12 1.7E-16 118.5 12.5 134 122-270 40-211 (421)
243 4azs_A Methyltransferase WBDD; 99.3 7.5E-13 2.6E-17 129.6 7.0 100 122-224 67-172 (569)
244 2qfm_A Spermine synthase; sper 99.3 6.6E-12 2.2E-16 115.6 12.6 148 121-270 188-361 (364)
245 3ldg_A Putative uncharacterize 99.3 7.8E-12 2.7E-16 116.7 13.1 108 118-229 191-347 (384)
246 2wa2_A Non-structural protein 99.3 3.7E-13 1.3E-17 120.3 3.9 96 121-225 82-193 (276)
247 2b9e_A NOL1/NOP2/SUN domain fa 99.3 2.3E-11 8E-16 110.3 15.5 106 119-225 100-234 (309)
248 3ldu_A Putative methylase; str 99.3 6.1E-12 2.1E-16 117.5 11.6 108 118-229 192-348 (385)
249 2p41_A Type II methyltransfera 99.3 9.3E-13 3.2E-17 119.3 5.0 113 120-242 81-208 (305)
250 1zq9_A Probable dimethyladenos 99.3 3.8E-12 1.3E-16 114.1 8.9 73 121-200 28-101 (285)
251 3giw_A Protein of unknown func 99.3 2.3E-11 7.8E-16 108.2 13.2 123 122-245 79-222 (277)
252 1zg3_A Isoflavanone 4'-O-methy 99.3 1.3E-11 4.5E-16 113.7 11.9 119 121-252 193-346 (358)
253 3lcv_B Sisomicin-gentamicin re 99.3 2.4E-12 8.3E-17 113.1 6.5 96 122-223 133-234 (281)
254 2oxt_A Nucleoside-2'-O-methylt 99.3 1E-12 3.5E-17 116.8 4.0 95 121-225 74-185 (265)
255 2h1r_A Dimethyladenosine trans 99.3 5E-12 1.7E-16 114.1 8.4 73 121-200 42-114 (299)
256 2ld4_A Anamorsin; methyltransf 99.2 6.2E-12 2.1E-16 103.9 6.3 113 119-253 10-134 (176)
257 3frh_A 16S rRNA methylase; met 99.2 3.6E-11 1.2E-15 104.7 10.0 95 121-224 105-205 (253)
258 3gru_A Dimethyladenosine trans 99.2 8.4E-11 2.9E-15 105.9 9.5 73 121-200 50-122 (295)
259 3tqs_A Ribosomal RNA small sub 99.2 6.7E-10 2.3E-14 98.0 14.7 75 121-200 29-104 (255)
260 1m6y_A S-adenosyl-methyltransf 99.1 7.3E-11 2.5E-15 106.6 7.7 79 121-200 26-106 (301)
261 2okc_A Type I restriction enzy 99.1 1.3E-10 4.6E-15 110.3 8.6 102 121-226 171-308 (445)
262 3v97_A Ribosomal RNA large sub 99.1 4E-10 1.4E-14 112.7 11.8 108 119-227 188-349 (703)
263 3ll7_A Putative methyltransfer 99.1 1.6E-10 5.6E-15 108.3 7.9 75 122-199 94-170 (410)
264 2r6z_A UPF0341 protein in RSP 99.1 4.9E-11 1.7E-15 105.5 3.1 77 122-201 84-170 (258)
265 2qy6_A UPF0209 protein YFCK; s 99.1 1.1E-09 3.7E-14 96.7 11.8 138 122-270 61-247 (257)
266 1yub_A Ermam, rRNA methyltrans 99.1 6.6E-12 2.3E-16 109.8 -2.6 73 121-200 29-101 (245)
267 1qam_A ERMC' methyltransferase 99.0 3.1E-09 1.1E-13 92.9 13.5 73 121-200 30-102 (244)
268 3fut_A Dimethyladenosine trans 99.0 9.4E-10 3.2E-14 97.9 10.3 72 121-200 47-118 (271)
269 4gqb_A Protein arginine N-meth 99.0 6.1E-10 2.1E-14 109.5 9.5 96 122-222 358-464 (637)
270 3o4f_A Spermidine synthase; am 99.0 1.3E-08 4.6E-13 91.1 17.1 146 122-270 84-245 (294)
271 3ftd_A Dimethyladenosine trans 99.0 4E-09 1.4E-13 92.7 13.3 73 121-200 31-103 (249)
272 3cvo_A Methyltransferase-like 99.0 3.5E-09 1.2E-13 90.0 11.5 98 122-223 31-152 (202)
273 3uzu_A Ribosomal RNA small sub 99.0 2.5E-09 8.7E-14 95.5 10.9 76 121-200 42-122 (279)
274 1qyr_A KSGA, high level kasuga 98.9 6E-09 2E-13 91.7 11.7 76 121-200 21-98 (252)
275 2ar0_A M.ecoki, type I restric 98.9 2.9E-09 1E-13 103.5 10.4 104 121-226 169-313 (541)
276 4fzv_A Putative methyltransfer 98.9 5.1E-09 1.7E-13 96.6 10.4 106 118-225 145-284 (359)
277 3ua3_A Protein arginine N-meth 98.9 3E-09 1E-13 104.8 9.0 100 122-222 410-531 (745)
278 3s1s_A Restriction endonucleas 98.9 1.2E-08 4.1E-13 102.0 12.6 106 121-228 321-468 (878)
279 3lkd_A Type I restriction-modi 98.9 4E-08 1.4E-12 95.4 16.0 150 121-271 221-409 (542)
280 2oyr_A UPF0341 protein YHIQ; a 98.8 3.6E-09 1.2E-13 93.4 6.3 93 123-219 90-194 (258)
281 3khk_A Type I restriction-modi 98.8 1.7E-08 5.8E-13 98.1 10.0 147 123-272 246-448 (544)
282 3evf_A RNA-directed RNA polyme 98.7 6.3E-08 2.2E-12 85.5 10.5 122 120-247 73-206 (277)
283 2wk1_A NOVP; transferase, O-me 98.7 1.8E-07 6E-12 83.5 12.5 124 121-246 106-265 (282)
284 4auk_A Ribosomal RNA large sub 98.7 6.9E-07 2.4E-11 82.2 16.6 138 119-270 209-355 (375)
285 3gcz_A Polyprotein; flavivirus 98.6 2.4E-08 8.3E-13 88.2 3.3 120 120-244 89-220 (282)
286 3c6k_A Spermine synthase; sper 98.4 4.2E-06 1.4E-10 77.3 14.3 147 122-270 206-378 (381)
287 3p8z_A Mtase, non-structural p 98.3 3E-06 1E-10 72.9 10.5 122 120-248 77-210 (267)
288 3eld_A Methyltransferase; flav 98.3 4.4E-07 1.5E-11 80.7 5.3 119 121-244 81-210 (300)
289 3tka_A Ribosomal RNA small sub 98.3 1.6E-06 5.4E-11 78.7 8.6 75 121-199 57-135 (347)
290 2px2_A Genome polyprotein [con 98.3 3.1E-06 1.1E-10 73.8 9.6 112 119-243 71-201 (269)
291 2efj_A 3,7-dimethylxanthine me 98.3 7.9E-06 2.7E-10 75.8 13.0 102 122-226 53-226 (384)
292 3lkz_A Non-structural protein 98.3 3.5E-06 1.2E-10 74.8 9.8 123 120-248 93-228 (321)
293 2k4m_A TR8_protein, UPF0146 pr 98.2 1.2E-06 4.3E-11 70.1 5.6 82 122-223 36-119 (153)
294 1wg8_A Predicted S-adenosylmet 98.2 1.7E-06 5.9E-11 76.7 6.7 73 121-199 22-96 (285)
295 3ufb_A Type I restriction-modi 98.2 4.1E-05 1.4E-09 74.0 15.8 149 121-273 217-416 (530)
296 3b5i_A S-adenosyl-L-methionine 98.1 4.6E-06 1.6E-10 77.2 7.6 105 122-226 53-226 (374)
297 3vyw_A MNMC2; tRNA wobble urid 98.1 7.8E-05 2.7E-09 67.0 14.5 140 123-274 98-264 (308)
298 2oo3_A Protein involved in cat 98.0 7.1E-06 2.4E-10 72.8 6.2 126 122-251 92-224 (283)
299 2zig_A TTHA0409, putative modi 97.9 2.1E-05 7.3E-10 70.3 7.8 47 121-169 235-281 (297)
300 3r24_A NSP16, 2'-O-methyl tran 97.9 0.00027 9.1E-09 62.8 14.1 109 119-251 107-239 (344)
301 1g55_A DNA cytosine methyltran 97.9 0.00013 4.3E-09 66.7 12.0 120 122-249 2-145 (343)
302 1m6e_X S-adenosyl-L-methionnin 97.9 1.1E-05 3.7E-10 74.3 4.8 105 122-226 52-210 (359)
303 1i4w_A Mitochondrial replicati 97.4 0.00027 9.3E-09 64.8 7.3 60 122-184 59-118 (353)
304 3g7u_A Cytosine-specific methy 97.4 0.0039 1.3E-07 57.6 14.6 116 123-247 3-145 (376)
305 1g60_A Adenine-specific methyl 97.4 0.00026 8.9E-09 62.0 6.3 49 120-170 211-259 (260)
306 2py6_A Methyltransferase FKBM; 97.3 0.00065 2.2E-08 63.5 9.0 63 119-181 224-292 (409)
307 2c7p_A Modification methylase 97.3 0.0077 2.6E-07 54.5 15.5 116 122-249 11-149 (327)
308 4h0n_A DNMT2; SAH binding, tra 97.1 0.0081 2.8E-07 54.5 13.0 121 123-250 4-146 (333)
309 3qv2_A 5-cytosine DNA methyltr 97.0 0.015 5.2E-07 52.5 14.0 121 122-249 10-156 (327)
310 2dph_A Formaldehyde dismutase; 96.9 0.00046 1.6E-08 63.9 3.1 98 120-224 184-298 (398)
311 3ubt_Y Modification methylase 96.7 0.095 3.2E-06 46.8 17.5 115 124-249 2-139 (331)
312 3pvc_A TRNA 5-methylaminomethy 96.7 0.0035 1.2E-07 62.2 8.6 124 122-251 59-231 (689)
313 1f8f_A Benzyl alcohol dehydrog 96.7 0.0018 6.1E-08 59.3 5.6 98 119-224 188-288 (371)
314 1kol_A Formaldehyde dehydrogen 96.6 0.0017 5.8E-08 60.0 4.9 97 120-224 184-299 (398)
315 1pl8_A Human sorbitol dehydrog 96.6 0.0036 1.2E-07 56.9 6.7 96 121-224 171-272 (356)
316 3jv7_A ADH-A; dehydrogenase, n 96.5 0.0031 1E-07 57.1 5.9 99 119-224 169-269 (345)
317 3two_A Mannitol dehydrogenase; 96.5 0.0064 2.2E-07 55.0 8.0 88 121-224 176-264 (348)
318 3ps9_A TRNA 5-methylaminomethy 96.3 0.084 2.9E-06 52.0 15.5 124 122-251 67-239 (676)
319 3s2e_A Zinc-containing alcohol 96.3 0.01 3.5E-07 53.4 8.0 96 120-224 165-262 (340)
320 2zig_A TTHA0409, putative modi 96.3 0.0054 1.8E-07 54.5 6.0 80 171-251 20-134 (297)
321 3fpc_A NADP-dependent alcohol 96.3 0.0026 8.8E-08 57.8 3.9 97 120-224 165-265 (352)
322 3tos_A CALS11; methyltransfera 96.2 0.019 6.4E-07 50.2 8.9 126 122-248 70-242 (257)
323 4ej6_A Putative zinc-binding d 96.2 0.0067 2.3E-07 55.5 6.3 96 121-224 182-283 (370)
324 1pqw_A Polyketide synthase; ro 96.1 0.004 1.4E-07 51.4 3.8 94 121-224 38-136 (198)
325 1e3j_A NADP(H)-dependent ketos 96.0 0.012 4.1E-07 53.2 7.2 95 121-224 168-270 (352)
326 4dvj_A Putative zinc-dependent 95.9 0.01 3.4E-07 54.2 6.0 96 121-224 171-269 (363)
327 3uog_A Alcohol dehydrogenase; 95.9 0.0058 2E-07 55.7 4.3 95 120-224 188-286 (363)
328 1uuf_A YAHK, zinc-type alcohol 95.9 0.015 5.3E-07 53.1 7.0 93 121-224 194-287 (369)
329 2h6e_A ADH-4, D-arabinose 1-de 95.8 0.013 4.6E-07 52.8 6.2 95 122-224 171-268 (344)
330 3ip1_A Alcohol dehydrogenase, 95.8 0.01 3.5E-07 54.9 5.5 99 120-224 212-317 (404)
331 1cdo_A Alcohol dehydrogenase; 95.8 0.014 4.8E-07 53.3 6.3 97 120-224 191-293 (374)
332 1boo_A Protein (N-4 cytosine-s 95.7 0.063 2.2E-06 48.2 10.3 79 172-251 14-118 (323)
333 3m6i_A L-arabinitol 4-dehydrog 95.6 0.022 7.6E-07 51.6 7.2 98 121-224 179-282 (363)
334 1vj0_A Alcohol dehydrogenase, 95.6 0.0067 2.3E-07 55.7 3.5 96 121-224 195-297 (380)
335 1p0f_A NADP-dependent alcohol 95.6 0.015 5.3E-07 53.0 5.9 98 119-224 189-292 (373)
336 4eez_A Alcohol dehydrogenase 1 95.5 0.033 1.1E-06 50.1 7.9 97 121-224 163-262 (348)
337 2qrv_A DNA (cytosine-5)-methyl 95.5 0.024 8.3E-07 50.5 6.5 74 121-199 15-90 (295)
338 2jhf_A Alcohol dehydrogenase E 95.4 0.021 7.3E-07 52.0 6.2 97 120-224 190-292 (374)
339 1e3i_A Alcohol dehydrogenase, 95.4 0.022 7.4E-07 52.0 6.2 97 120-224 194-296 (376)
340 2fzw_A Alcohol dehydrogenase c 95.4 0.019 6.4E-07 52.4 5.7 97 120-224 189-291 (373)
341 1v3u_A Leukotriene B4 12- hydr 95.3 0.02 6.8E-07 51.3 5.6 97 119-224 143-243 (333)
342 3uko_A Alcohol dehydrogenase c 95.3 0.016 5.3E-07 53.1 5.0 97 120-224 192-294 (378)
343 4b7c_A Probable oxidoreductase 95.3 0.016 5.5E-07 52.0 5.0 97 119-224 147-247 (336)
344 4eye_A Probable oxidoreductase 95.3 0.015 5.3E-07 52.4 4.8 93 121-224 159-256 (342)
345 3goh_A Alcohol dehydrogenase, 95.3 0.044 1.5E-06 48.6 7.6 86 121-224 142-228 (315)
346 2eih_A Alcohol dehydrogenase; 95.2 0.014 4.7E-07 52.7 4.2 95 120-224 165-264 (343)
347 1piw_A Hypothetical zinc-type 95.2 0.016 5.4E-07 52.7 4.6 95 121-224 179-275 (360)
348 4a2c_A Galactitol-1-phosphate 95.1 0.034 1.2E-06 49.9 6.4 96 121-224 160-259 (346)
349 2hcy_A Alcohol dehydrogenase 1 95.1 0.038 1.3E-06 49.8 6.7 96 121-224 169-268 (347)
350 1jvb_A NAD(H)-dependent alcoho 95.0 0.045 1.5E-06 49.3 7.0 96 121-224 170-270 (347)
351 3gms_A Putative NADPH:quinone 95.0 0.013 4.4E-07 52.8 3.4 95 120-224 143-242 (340)
352 3qwb_A Probable quinone oxidor 95.0 0.018 6E-07 51.7 4.2 94 121-224 148-246 (334)
353 1rjw_A ADH-HT, alcohol dehydro 95.0 0.029 9.9E-07 50.5 5.5 95 121-224 164-260 (339)
354 2d8a_A PH0655, probable L-thre 94.9 0.018 6.1E-07 52.0 4.1 96 121-224 167-266 (348)
355 3jyn_A Quinone oxidoreductase; 94.9 0.018 6.1E-07 51.5 4.0 94 121-224 140-238 (325)
356 2c0c_A Zinc binding alcohol de 94.9 0.046 1.6E-06 49.7 6.7 94 121-224 163-260 (362)
357 1wma_A Carbonyl reductase [NAD 94.8 0.1 3.5E-06 44.6 8.4 102 122-225 4-138 (276)
358 3fbg_A Putative arginate lyase 94.8 0.041 1.4E-06 49.6 6.0 95 121-224 150-247 (346)
359 1iz0_A Quinone oxidoreductase; 94.7 0.045 1.5E-06 48.3 6.0 90 121-224 125-217 (302)
360 2j3h_A NADP-dependent oxidored 94.6 0.05 1.7E-06 48.8 6.3 98 119-224 153-254 (345)
361 2vz8_A Fatty acid synthase; tr 94.6 0.013 4.3E-07 66.2 2.6 99 121-225 1240-1348(2512)
362 3swr_A DNA (cytosine-5)-methyl 94.5 1.7 5.9E-05 44.8 17.9 119 122-249 540-698 (1002)
363 1qor_A Quinone oxidoreductase; 94.5 0.02 7E-07 51.1 3.3 94 121-224 140-238 (327)
364 3fwz_A Inner membrane protein 94.4 0.17 5.9E-06 39.2 8.2 111 122-247 7-121 (140)
365 1wly_A CAAR, 2-haloacrylate re 94.4 0.038 1.3E-06 49.5 4.8 94 121-224 145-243 (333)
366 4dup_A Quinone oxidoreductase; 94.3 0.032 1.1E-06 50.5 4.2 95 120-224 166-264 (353)
367 1yb5_A Quinone oxidoreductase; 94.2 0.044 1.5E-06 49.7 4.9 95 120-224 169-268 (351)
368 1rjd_A PPM1P, carboxy methyl t 94.2 0.42 1.4E-05 43.1 11.3 101 122-224 98-231 (334)
369 1g60_A Adenine-specific methyl 94.1 0.23 7.7E-06 43.0 9.1 75 173-251 5-97 (260)
370 1boo_A Protein (N-4 cytosine-s 94.1 0.044 1.5E-06 49.2 4.6 61 120-183 251-311 (323)
371 3nx4_A Putative oxidoreductase 94.1 0.14 4.9E-06 45.3 8.0 90 124-224 149-240 (324)
372 2b5w_A Glucose dehydrogenase; 94.1 0.045 1.5E-06 49.6 4.7 93 123-224 174-272 (357)
373 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.26 9E-06 42.2 8.9 103 122-225 7-147 (266)
374 1eg2_A Modification methylase 93.7 0.086 2.9E-06 47.4 5.8 48 120-169 241-291 (319)
375 3o38_A Short chain dehydrogena 93.7 0.19 6.4E-06 43.1 7.8 78 122-200 22-109 (266)
376 1xa0_A Putative NADPH dependen 93.7 0.08 2.7E-06 47.2 5.5 93 122-224 149-245 (328)
377 2j8z_A Quinone oxidoreductase; 93.6 0.055 1.9E-06 48.9 4.3 95 120-224 161-260 (354)
378 3gaz_A Alcohol dehydrogenase s 93.4 0.066 2.3E-06 48.2 4.5 92 120-224 149-245 (343)
379 3pxx_A Carveol dehydrogenase; 93.4 0.32 1.1E-05 42.0 8.8 102 122-225 10-153 (287)
380 3me5_A Cytosine-specific methy 93.3 0.22 7.6E-06 47.3 8.2 122 122-248 88-255 (482)
381 2dq4_A L-threonine 3-dehydroge 93.3 0.027 9.2E-07 50.7 1.7 93 122-224 165-261 (343)
382 4fs3_A Enoyl-[acyl-carrier-pro 93.3 0.54 1.8E-05 40.3 10.0 103 122-225 6-146 (256)
383 2zb4_A Prostaglandin reductase 93.2 0.085 2.9E-06 47.6 4.9 97 119-224 156-259 (357)
384 3tjr_A Short chain dehydrogena 93.1 0.22 7.6E-06 43.8 7.5 77 122-200 31-116 (301)
385 1tt7_A YHFP; alcohol dehydroge 93.0 0.12 4.1E-06 46.0 5.5 93 122-224 150-246 (330)
386 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.9 0.26 9E-06 42.1 7.4 77 122-200 21-107 (274)
387 4eso_A Putative oxidoreductase 92.7 0.61 2.1E-05 39.8 9.5 99 122-225 8-138 (255)
388 2cdc_A Glucose dehydrogenase g 92.4 0.15 5.1E-06 46.2 5.4 91 122-224 181-277 (366)
389 3av4_A DNA (cytosine-5)-methyl 92.4 3.7 0.00013 43.6 16.4 119 122-249 851-1009(1330)
390 4dcm_A Ribosomal RNA large sub 92.3 0.32 1.1E-05 44.5 7.5 92 122-224 39-135 (375)
391 3krt_A Crotonyl COA reductase; 92.2 0.18 6.1E-06 47.3 5.8 95 119-224 226-343 (456)
392 3ek2_A Enoyl-(acyl-carrier-pro 92.2 0.4 1.4E-05 40.9 7.6 103 121-225 13-153 (271)
393 3grk_A Enoyl-(acyl-carrier-pro 92.1 0.54 1.8E-05 41.1 8.6 102 122-225 31-169 (293)
394 1h2b_A Alcohol dehydrogenase; 92.0 0.27 9.1E-06 44.4 6.6 95 121-224 186-284 (359)
395 3h7a_A Short chain dehydrogena 92.0 0.31 1.1E-05 41.6 6.7 77 122-200 7-91 (252)
396 2cf5_A Atccad5, CAD, cinnamyl 92.0 0.19 6.4E-06 45.4 5.5 94 121-224 180-274 (357)
397 3r3s_A Oxidoreductase; structu 91.9 0.57 1.9E-05 41.0 8.5 102 122-225 49-185 (294)
398 3edm_A Short chain dehydrogena 91.9 0.42 1.4E-05 40.9 7.4 102 122-225 8-143 (259)
399 3ijr_A Oxidoreductase, short c 91.9 0.77 2.6E-05 40.0 9.2 102 122-225 47-182 (291)
400 3sx2_A Putative 3-ketoacyl-(ac 91.8 0.55 1.9E-05 40.4 8.1 77 122-200 13-110 (278)
401 3llv_A Exopolyphosphatase-rela 91.6 1.3 4.4E-05 33.8 9.4 70 122-200 6-78 (141)
402 3k31_A Enoyl-(acyl-carrier-pro 91.4 0.67 2.3E-05 40.5 8.4 102 122-225 30-168 (296)
403 3c85_A Putative glutathione-re 91.3 0.77 2.6E-05 36.9 8.1 95 122-225 39-139 (183)
404 4gmf_A Yersiniabactin biosynth 91.3 1.2 4.3E-05 40.6 10.2 113 122-248 7-123 (372)
405 1zkd_A DUF185; NESG, RPR58, st 91.2 0.65 2.2E-05 42.8 8.2 69 122-199 81-156 (387)
406 3iht_A S-adenosyl-L-methionine 91.0 1.6 5.6E-05 34.9 9.2 94 122-222 41-144 (174)
407 3ftp_A 3-oxoacyl-[acyl-carrier 91.0 0.54 1.9E-05 40.6 7.2 77 122-200 28-113 (270)
408 1yqd_A Sinapyl alcohol dehydro 90.9 0.34 1.2E-05 43.8 6.0 94 121-224 187-281 (366)
409 3o26_A Salutaridine reductase; 90.8 0.97 3.3E-05 39.1 8.8 78 122-200 12-99 (311)
410 4egf_A L-xylulose reductase; s 90.8 0.47 1.6E-05 40.8 6.6 77 122-200 20-106 (266)
411 1eg2_A Modification methylase 90.8 0.48 1.6E-05 42.4 6.8 79 172-251 38-138 (319)
412 3tfo_A Putative 3-oxoacyl-(acy 90.8 0.53 1.8E-05 40.6 6.9 77 122-200 4-89 (264)
413 1y1p_A ARII, aldehyde reductas 90.7 1.9 6.6E-05 37.6 10.8 79 121-200 10-91 (342)
414 1geg_A Acetoin reductase; SDR 90.6 0.89 3E-05 38.6 8.2 77 122-200 2-87 (256)
415 2ixa_A Alpha-N-acetylgalactosa 90.6 2.2 7.4E-05 39.7 11.4 117 122-247 20-145 (444)
416 4a0s_A Octenoyl-COA reductase/ 90.6 0.23 7.9E-06 46.3 4.7 95 119-224 218-335 (447)
417 3is3_A 17BETA-hydroxysteroid d 90.5 0.61 2.1E-05 40.1 7.1 102 122-225 18-152 (270)
418 4imr_A 3-oxoacyl-(acyl-carrier 90.5 0.62 2.1E-05 40.3 7.1 77 122-200 33-117 (275)
419 1lss_A TRK system potassium up 90.4 1.4 4.8E-05 33.1 8.4 93 122-223 4-100 (140)
420 3v2g_A 3-oxoacyl-[acyl-carrier 90.3 0.82 2.8E-05 39.4 7.8 102 122-225 31-165 (271)
421 3h2s_A Putative NADH-flavin re 90.3 1.2 4.3E-05 36.4 8.6 67 124-200 2-70 (224)
422 3ioy_A Short-chain dehydrogena 90.2 0.8 2.8E-05 40.6 7.8 78 122-200 8-95 (319)
423 3pgx_A Carveol dehydrogenase; 90.2 0.71 2.4E-05 39.8 7.3 77 122-200 15-113 (280)
424 3ksu_A 3-oxoacyl-acyl carrier 90.1 0.68 2.3E-05 39.7 7.0 102 122-225 11-147 (262)
425 3r1i_A Short-chain type dehydr 90.0 0.49 1.7E-05 41.0 6.1 77 122-200 32-117 (276)
426 4f6c_A AUSA reductase domain p 89.8 5.6 0.00019 36.2 13.5 77 122-200 69-158 (427)
427 1fmc_A 7 alpha-hydroxysteroid 89.8 0.55 1.9E-05 39.5 6.1 77 122-200 11-96 (255)
428 4da9_A Short-chain dehydrogena 89.7 1.2 4E-05 38.6 8.3 77 122-200 29-115 (280)
429 4fgs_A Probable dehydrogenase 89.7 1.9 6.5E-05 37.6 9.6 99 122-225 29-159 (273)
430 3qiv_A Short-chain dehydrogena 89.6 0.63 2.1E-05 39.3 6.3 77 122-200 9-94 (253)
431 1gee_A Glucose 1-dehydrogenase 89.6 0.83 2.8E-05 38.7 7.1 77 122-200 7-93 (261)
432 3g0o_A 3-hydroxyisobutyrate de 89.6 2.1 7.1E-05 37.5 9.9 112 122-249 7-125 (303)
433 3tqh_A Quinone oxidoreductase; 89.6 1.2 4.1E-05 39.3 8.4 90 121-224 152-244 (321)
434 4e6p_A Probable sorbitol dehyd 89.5 1.1 3.8E-05 38.1 7.9 74 122-200 8-90 (259)
435 1yb1_A 17-beta-hydroxysteroid 89.4 0.7 2.4E-05 39.7 6.6 77 122-200 31-116 (272)
436 3ius_A Uncharacterized conserv 89.3 3.4 0.00011 35.2 10.9 90 122-225 5-102 (286)
437 3uve_A Carveol dehydrogenase ( 89.3 0.94 3.2E-05 39.1 7.3 77 122-200 11-112 (286)
438 4ezb_A Uncharacterized conserv 89.1 3.7 0.00013 36.3 11.2 113 123-250 25-145 (317)
439 2wyu_A Enoyl-[acyl carrier pro 89.1 1 3.5E-05 38.3 7.3 102 122-225 8-146 (261)
440 3u5t_A 3-oxoacyl-[acyl-carrier 89.0 0.75 2.6E-05 39.6 6.4 102 122-225 27-161 (267)
441 3oec_A Carveol dehydrogenase ( 88.8 1.1 3.7E-05 39.7 7.5 77 122-200 46-143 (317)
442 3l77_A Short-chain alcohol deh 88.6 1.2 4E-05 37.2 7.2 77 122-200 2-88 (235)
443 1ae1_A Tropinone reductase-I; 88.4 1.2 4.1E-05 38.2 7.4 77 122-200 21-107 (273)
444 1xg5_A ARPG836; short chain de 88.4 0.83 2.8E-05 39.3 6.3 78 122-200 32-119 (279)
445 3tox_A Short chain dehydrogena 88.4 0.47 1.6E-05 41.2 4.7 77 122-200 8-93 (280)
446 4a27_A Synaptic vesicle membra 88.3 0.32 1.1E-05 43.7 3.7 93 120-224 141-237 (349)
447 4fn4_A Short chain dehydrogena 88.1 1.7 5.8E-05 37.4 8.1 76 122-200 7-92 (254)
448 2ae2_A Protein (tropinone redu 87.8 1.2 4.3E-05 37.8 7.0 77 122-200 9-95 (260)
449 3pk0_A Short-chain dehydrogena 87.8 0.59 2E-05 40.0 4.9 78 122-200 10-96 (262)
450 1gu7_A Enoyl-[acyl-carrier-pro 87.7 0.46 1.6E-05 42.8 4.4 100 120-224 165-274 (364)
451 2vn8_A Reticulon-4-interacting 87.7 1.6 5.3E-05 39.5 8.0 96 120-224 182-279 (375)
452 3gg2_A Sugar dehydrogenase, UD 87.6 1.7 5.7E-05 40.7 8.2 93 124-225 4-122 (450)
453 1zsy_A Mitochondrial 2-enoyl t 87.5 0.8 2.7E-05 41.1 5.9 97 121-224 167-269 (357)
454 2hwk_A Helicase NSP2; rossman 87.5 4.3 0.00015 35.7 10.1 34 191-224 205-253 (320)
455 3s55_A Putative short-chain de 87.4 1.7 5.9E-05 37.3 7.8 77 122-200 10-107 (281)
456 4hkt_A Inositol 2-dehydrogenas 87.3 2.9 9.9E-05 36.9 9.4 109 123-248 4-118 (331)
457 3icc_A Putative 3-oxoacyl-(acy 87.2 1.2 4.3E-05 37.4 6.6 102 122-225 7-147 (255)
458 3tsc_A Putative oxidoreductase 87.2 1.4 4.8E-05 37.8 7.0 77 122-200 11-109 (277)
459 3e8x_A Putative NAD-dependent 87.2 2 6.8E-05 35.6 7.8 68 122-200 21-92 (236)
460 4dyv_A Short-chain dehydrogena 87.1 0.82 2.8E-05 39.5 5.5 74 122-200 28-110 (272)
461 2dpo_A L-gulonate 3-dehydrogen 87.1 2.5 8.5E-05 37.7 8.7 92 123-223 7-121 (319)
462 1xu9_A Corticosteroid 11-beta- 87.0 1.9 6.5E-05 37.1 7.8 77 122-199 28-113 (286)
463 3ic5_A Putative saccharopine d 87.0 1.1 3.8E-05 32.6 5.5 70 122-200 5-77 (118)
464 2qq5_A DHRS1, dehydrogenase/re 86.9 2.6 8.8E-05 35.7 8.5 77 122-200 5-91 (260)
465 1g0o_A Trihydroxynaphthalene r 86.9 1.5 5E-05 37.9 7.0 102 122-225 29-163 (283)
466 3gvc_A Oxidoreductase, probabl 86.8 1.5 5.2E-05 37.9 7.0 74 122-200 29-111 (277)
467 2rhc_B Actinorhodin polyketide 86.8 1.3 4.4E-05 38.2 6.6 77 122-200 22-107 (277)
468 2pd4_A Enoyl-[acyl-carrier-pro 86.5 1.4 4.8E-05 37.8 6.6 102 122-225 6-144 (275)
469 3dii_A Short-chain dehydrogena 86.2 1.7 5.8E-05 36.7 6.9 73 122-200 2-83 (247)
470 4dmm_A 3-oxoacyl-[acyl-carrier 86.2 1.7 5.8E-05 37.3 7.0 77 122-200 28-114 (269)
471 3gaf_A 7-alpha-hydroxysteroid 86.1 0.85 2.9E-05 38.9 5.0 77 122-200 12-97 (256)
472 3ggo_A Prephenate dehydrogenas 86.1 2.2 7.4E-05 37.8 7.8 102 123-239 34-141 (314)
473 1qsg_A Enoyl-[acyl-carrier-pro 86.0 1.9 6.6E-05 36.7 7.3 102 122-225 9-148 (265)
474 3oid_A Enoyl-[acyl-carrier-pro 86.0 1.4 4.8E-05 37.5 6.4 77 122-200 4-90 (258)
475 3r6d_A NAD-dependent epimerase 86.0 4.1 0.00014 33.3 9.1 94 124-225 7-107 (221)
476 4ibo_A Gluconate dehydrogenase 85.8 0.76 2.6E-05 39.7 4.5 77 122-200 26-111 (271)
477 2zat_A Dehydrogenase/reductase 85.7 1.4 4.9E-05 37.3 6.2 77 122-200 14-99 (260)
478 3afn_B Carbonyl reductase; alp 85.6 0.78 2.7E-05 38.6 4.5 77 122-200 7-93 (258)
479 1sby_A Alcohol dehydrogenase; 85.6 6.3 0.00021 33.0 10.3 77 122-200 5-92 (254)
480 3trk_A Nonstructural polyprote 85.6 3.4 0.00012 36.0 8.3 59 191-251 210-284 (324)
481 3sc4_A Short chain dehydrogena 85.3 1.3 4.4E-05 38.4 5.8 102 122-225 9-151 (285)
482 2nvw_A Galactose/lactose metab 85.3 4.4 0.00015 38.1 9.9 116 122-247 39-169 (479)
483 3vtf_A UDP-glucose 6-dehydroge 85.2 0.68 2.3E-05 43.4 4.2 39 123-163 22-62 (444)
484 3u3x_A Oxidoreductase; structu 85.2 8.8 0.0003 34.4 11.6 115 122-248 26-143 (361)
485 3ew7_A LMO0794 protein; Q8Y8U8 85.2 2.4 8.2E-05 34.4 7.2 89 124-225 2-102 (221)
486 2p91_A Enoyl-[acyl-carrier-pro 85.1 2 6.9E-05 37.0 7.0 77 122-200 21-107 (285)
487 4e21_A 6-phosphogluconate dehy 85.1 3.4 0.00012 37.4 8.7 115 122-250 22-139 (358)
488 3ai3_A NADPH-sorbose reductase 85.0 1.7 5.9E-05 36.9 6.4 77 122-200 7-93 (263)
489 3gqv_A Enoyl reductase; medium 84.8 1.1 3.6E-05 40.6 5.2 94 121-224 164-262 (371)
490 2c07_A 3-oxoacyl-(acyl-carrier 84.7 2.2 7.5E-05 36.8 7.0 77 122-200 44-129 (285)
491 4e3z_A Putative oxidoreductase 84.7 2.6 8.9E-05 36.0 7.5 77 122-200 26-112 (272)
492 2cfc_A 2-(R)-hydroxypropyl-COM 84.7 1.2 3.9E-05 37.4 5.1 77 122-200 2-88 (250)
493 4f6l_B AUSA reductase domain p 84.6 6.7 0.00023 36.7 10.9 99 122-225 150-277 (508)
494 4had_A Probable oxidoreductase 84.6 2.4 8.2E-05 37.7 7.5 113 122-247 23-140 (350)
495 3dqp_A Oxidoreductase YLBE; al 84.4 0.73 2.5E-05 37.9 3.6 90 124-225 2-105 (219)
496 3pef_A 6-phosphogluconate dehy 84.4 1.7 5.9E-05 37.6 6.2 109 124-249 3-118 (287)
497 3lyl_A 3-oxoacyl-(acyl-carrier 84.3 3.9 0.00013 34.1 8.3 77 122-200 5-90 (247)
498 2b4q_A Rhamnolipids biosynthes 84.3 1 3.4E-05 39.0 4.6 76 122-200 29-113 (276)
499 3ucx_A Short chain dehydrogena 84.3 4.5 0.00015 34.3 8.8 77 122-200 11-96 (264)
500 3rc1_A Sugar 3-ketoreductase; 84.3 6.9 0.00024 34.9 10.4 112 122-249 27-145 (350)
No 1
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=100.00 E-value=1.2e-41 Score=301.45 Aligned_cols=228 Identities=34% Similarity=0.509 Sum_probs=198.9
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHHHhhcCcCceeecChHHHHHhhhhhccccCCCCccccccccCCCCCCCCeEEEEcC
Q 022962 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGT 130 (289)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~l~~~n~~~~l~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~~~~~~~~~~~~VLDiGc 130 (289)
....+..++++ +.+++..|.+.+.+||+++|++++++..++|.+++++++.++++++. .++.+||||||
T Consensus 21 ~~~~~g~~l~~-~~~~~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~~----------~~~~~vLDiG~ 89 (249)
T 3g89_A 21 GGKALGLDLKP-HLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLW----------QGPLRVLDLGT 89 (249)
T ss_dssp HHHHHTCCCGG-GHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCC----------CSSCEEEEETC
T ss_pred HHHHcCCCccH-HHHHHHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhccccc----------CCCCEEEEEcC
Confidence 34456778889 99999999999999999999999999999999999999998877542 24789999999
Q ss_pred CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCcccHHHHHHH
Q 022962 131 GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEY 210 (289)
Q Consensus 131 G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~~~~~~ll~~ 210 (289)
|+|.+++.+|..+|+.+|+|+|+|++++++|+++++.++++||+++++|++++......+++||+|+|++++++..+++.
T Consensus 90 G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~~~~~ll~~ 169 (249)
T 3g89_A 90 GAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSEL 169 (249)
T ss_dssp TTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSCCHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCcCCHHHHHHH
Confidence 99999999999999999999999999999999999999998999999999988643223478999999999999999999
Q ss_pred HccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEecCCCCCCCCCCCCCCcCCCC
Q 022962 211 CLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289 (289)
Q Consensus 211 ~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~~~~p~~~pr~~g~~~~~~~ 289 (289)
+.++|||||+|++++|....+++.++.+.++..|+.+.++..+..|...+.|++++++|.++||.+|||++|+|+|.||
T Consensus 170 ~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~~t~~~yPr~~g~~~k~pl 248 (249)
T 3g89_A 170 LLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL 248 (249)
T ss_dssp HGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECSCCCTTCSCSTTHHHHSCC
T ss_pred HHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCCCCCCCCCCCCCCcCCCCC
Confidence 9999999999999999888899998888999999999999988888878899999999999999999999999999998
No 2
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=100.00 E-value=1.4e-36 Score=266.70 Aligned_cols=229 Identities=40% Similarity=0.643 Sum_probs=203.7
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHHHhhcCcCceeecChHHHHHhhhhhccccCCCCccccccccCCCCCCCCeEEEEcC
Q 022962 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGT 130 (289)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~l~~~n~~~~l~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~~~~~~~~~~~~VLDiGc 130 (289)
....+..++++++.+++..|.+.+.+||..++++.+....++|.+++.+++....... +.++.+||||||
T Consensus 10 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~d~l~~~~~~~----------~~~~~~vLDiG~ 79 (240)
T 1xdz_A 10 GLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVD----------FNQVNTICDVGA 79 (240)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHHHHHHHSCCCSCCSHHHHHHHTHHHHHGGGGTSC----------GGGCCEEEEECS
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHhHhcCccccCCHHHHHHHHHHHHHhHHHhcc----------cCCCCEEEEecC
Confidence 3455778899999999999999999999999999999999999999999887654331 123789999999
Q ss_pred CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCcccHHHHHHH
Q 022962 131 GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEY 210 (289)
Q Consensus 131 G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~~~~~~ll~~ 210 (289)
|+|.+++.+|...++.+|+|+|+|+++++.|+++++.++++|++++++|++++......+++||+|+|+++.++..+++.
T Consensus 80 G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~~~~~~l~~ 159 (240)
T 1xdz_A 80 GAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSEL 159 (240)
T ss_dssp SSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECCSCHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEeccCCHHHHHHH
Confidence 99999999998888899999999999999999999999998899999999987632112368999999999999999999
Q ss_pred HccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEecCCCCCCCCCCCCCCcCCCC
Q 022962 211 CLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKYPRDPGTPAKVPL 289 (289)
Q Consensus 211 ~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~~~~p~~~pr~~g~~~~~~~ 289 (289)
+.++|+|||.+++..|....+++.++.+.++..|+.+.++..+.+|...+.+.+++++|...+|.+|||++|.|.|.||
T Consensus 160 ~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~~~~~~~pr~~~~~~~~pl 238 (240)
T 1xdz_A 160 CLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPI 238 (240)
T ss_dssp HGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECSCCCTTCSCSTTHHHHSCC
T ss_pred HHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecCCCCCCCCCCCCccccCCC
Confidence 9999999999999998888888888888899999999988877777777899999999999999999999999999998
No 3
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.95 E-value=2.4e-26 Score=195.96 Aligned_cols=198 Identities=32% Similarity=0.509 Sum_probs=158.3
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHHHhhcCcCceeecChHHHHHhhhhhccccCCCCccccccccCCCCCCCCeEEEEcC
Q 022962 51 VNSSHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTSHCDSSCNSNLKLVDVGT 130 (289)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~l~~~n~~~~l~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~~~~~~~~~~~~VLDiGc 130 (289)
.......++++++.+.+..|.+.+.+|+..+++.......+.+.+++++.+...... ++.+|||+||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~vLDiG~ 74 (207)
T 1jsx_A 8 LLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-------------QGERFIDVGT 74 (207)
T ss_dssp HHHTTTCCCCHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHGGGC-------------CSSEEEEETC
T ss_pred HHHHcCCCCCHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHhhhhhhhhc-------------CCCeEEEECC
Confidence 344567789999999999999999999999999988777777777877766533211 2679999999
Q ss_pred CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCcccHHHHHHH
Q 022962 131 GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVAEMRILAEY 210 (289)
Q Consensus 131 G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~~~~~~ll~~ 210 (289)
|+|.+++.++..+|+.+|+|+|+|+.+++.++++++.+++++++++++|+.+... .++||+|+++++.++..+++.
T Consensus 75 G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~~~~~~~~~~~l~~ 150 (207)
T 1jsx_A 75 GPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS----EPPFDGVISRAFASLNDMVSW 150 (207)
T ss_dssp TTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC----CSCEEEEECSCSSSHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc----cCCcCEEEEeccCCHHHHHHH
Confidence 9999999999988899999999999999999999999998889999999988653 268999999999999999999
Q ss_pred HccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEec
Q 022962 211 CLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 211 ~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
+.++|+|||.+++..|..+.+++.++.+ ||.+.++..+.+|...+.+.+++++|.
T Consensus 151 ~~~~L~~gG~l~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 151 CHHLPGEQGRFYALKGQMPEDEIALLPE-----EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp HTTSEEEEEEEEEEESSCCHHHHHTSCT-----TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred HHHhcCCCcEEEEEeCCCchHHHHHHhc-----CCceeeeeeeccCCCCCceEEEEEEec
Confidence 9999999999999999888877765433 999888877777877888999998875
No 4
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.91 E-value=8.8e-24 Score=188.82 Aligned_cols=188 Identities=18% Similarity=0.237 Sum_probs=155.0
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHhhcCcCceeecChHHHHHhhhhhccccCCCCcccccc--ccCCCC-CCCCeEEEEcC
Q 022962 54 SHFETLNTRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS--HCDSSC-NSNLKLVDVGT 130 (289)
Q Consensus 54 ~~~~~~~~~~~~~l~~~~~~l~~~n~~~~l~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~--~~~~~~-~~~~~VLDiGc 130 (289)
....++++++.+++..+.+.+. .+.|++++.+..+||...+..+...+.|+++++.+ +....+ .++.+|||+||
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~i~g~~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~ 118 (276)
T 2b3t_A 42 FGETQLTDEQCQQLDALLTRRR---DGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGT 118 (276)
T ss_dssp TTTCBCCHHHHHHHHHHHHHHH---TTCCHHHHSCEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETC
T ss_pred ccCCCCCHHHHHHHHHHHHHHH---cCCChhHeeeeeEECCceEEeCCCCcccCchHHHHHHHHHHhcccCCCEEEEecC
Confidence 3456788888888888887765 78999999999999999888788888888887743 111111 35779999999
Q ss_pred CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC----------
Q 022962 131 GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA---------- 200 (289)
Q Consensus 131 G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~---------- 200 (289)
|+|.+++.++...|+.+|+|+|+|+.+++.+++|++.+++++++++++|+.+... +++||+|++|.
T Consensus 119 GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~----~~~fD~Iv~npPy~~~~~~~l 194 (276)
T 2b3t_A 119 GTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA----GQQFAMIVSNPPYIDEQDPHL 194 (276)
T ss_dssp TTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT----TCCEEEEEECCCCBCTTCHHH
T ss_pred CccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc----cCCccEEEECCCCCCcccccc
Confidence 9999999999888999999999999999999999999998889999999987422 36899999982
Q ss_pred -------------------cccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 201 -------------------VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 201 -------------------~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
...+..+++.+.++|+|||+++++.+..+.+++..+ ++..||..+++.
T Consensus 195 ~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 195 QQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQA---FILAGYHDVETC 261 (276)
T ss_dssp HSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHH---HHHTTCTTCCEE
T ss_pred ChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHH---HHHCCCcEEEEE
Confidence 134688999999999999999999988887776654 557899766554
No 5
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.86 E-value=2.8e-22 Score=180.40 Aligned_cols=194 Identities=13% Similarity=0.069 Sum_probs=147.5
Q ss_pred ccchhhhhhchhhhhhhccCCCC-C--HHHHHHHHHHHHHHHHhhcCcCceeecChHHHHHhhhhhccccCCCCcccccc
Q 022962 37 PHRTRAKTLTTTRIVNSSHFETL-N--TRQQEQIHLYVDALLQWNRKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS 113 (289)
Q Consensus 37 ~~r~~~~~l~~~~~~~~~~~~~~-~--~~~~~~l~~~~~~l~~~n~~~~l~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~ 113 (289)
..+..++.|..+..........+ . +.+... ..|.+.+.++..+.|++++.+..+||...+..+...+.|+++|+.+
T Consensus 33 ~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~r~~~~p~~yi~g~~~f~~~~~~v~~~~lipr~~te~l 111 (284)
T 1nv8_A 33 TSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEE-KRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEEL 111 (284)
T ss_dssp CHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHH-HHHHHHHHHHHTTCCHHHHHTEEEETTEEEECCTTSCCCCTTHHHH
T ss_pred ChHHHHHHHHHHHcCCCHHHHHhccccccccCH-HHHHHHHHHHHCCCCCeEEeeeeEECCeEEEeCCCceecChhHHHH
Confidence 34556677766663322222111 1 222332 6677777777899999999999999999999888889999988854
Q ss_pred --ccCCC--CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCc
Q 022962 114 --HCDSS--CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVS 188 (289)
Q Consensus 114 --~~~~~--~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~ 188 (289)
+.... ..++.+|||+|||+|.+++.++.. |+.+|+|+|+|+++++.|++|++.+++++ ++++++|+.+...
T Consensus 112 v~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~--- 187 (284)
T 1nv8_A 112 VELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK--- 187 (284)
T ss_dssp HHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---
T ss_pred HHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---
Confidence 11111 124679999999999999999998 89999999999999999999999999875 9999999987421
Q ss_pred CCCCc---eEEEEcCc--------------cc---------HHHHHHHHc-cccccCeEEEEEEcCCcHHHHHHHH
Q 022962 189 FREQY---DVAVARAV--------------AE---------MRILAEYCL-PLVRVGGLFVAAKGHDPQEEVKNSE 237 (289)
Q Consensus 189 ~~~~f---D~V~sn~~--------------~~---------~~~ll~~~~-~~LkpgG~l~~~~g~~~~~ei~~~~ 237 (289)
++| |+|+||.. .+ -..+++.+. +.|+|||+++++.|..+.+++.+++
T Consensus 188 --~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~ 261 (284)
T 1nv8_A 188 --EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIV 261 (284)
T ss_dssp --GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTS
T ss_pred --cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHH
Confidence 468 99999831 00 116788999 9999999999999988887776543
No 6
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.85 E-value=4.7e-20 Score=159.46 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=112.0
Q ss_pred CCCCeEEEEcCC-CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTG-AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG-~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|||+||| +|.+++.++... +.+|+|+|+|+.+++.|+++++.+++ +++++++|+..+... .+++||+|++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~--~~~~fD~I~~ 129 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGV--VEGTFDVIFS 129 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTT--CCSCEEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhc--ccCceeEEEE
Confidence 458899999999 999999999875 68999999999999999999999998 899999997654321 1378999999
Q ss_pred cCc-----------------------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeec
Q 022962 199 RAV-----------------------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 255 (289)
Q Consensus 199 n~~-----------------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~ 255 (289)
|.. ..+..+++.+.++|||||++++..... ......+.+.+++.||.+..+...
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~~-- 206 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-EKLLNVIKERGIKLGYSVKDIKFK-- 206 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-HHHHHHHHHHHHHTTCEEEEEEEC--
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-HhHHHHHHHHHHHcCCceEEEEec--
Confidence 831 124789999999999999999876433 244556667788999987776532
Q ss_pred CCCCCceEEEEEEecCCCCC
Q 022962 256 QSPFGQRTAVVCLKSRRTPK 275 (289)
Q Consensus 256 ~~~~~~r~lv~~~k~~~~p~ 275 (289)
.......++.+.|..+.|+
T Consensus 207 -~g~~~~~~l~f~~~~~~~~ 225 (230)
T 3evz_A 207 -VGTRWRHSLIFFKGISEGH 225 (230)
T ss_dssp -CCC-CEEEEEEECCC----
T ss_pred -CCCeEEEEEEEeccccccc
Confidence 2334555666666555543
No 7
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.82 E-value=8.6e-19 Score=154.93 Aligned_cols=144 Identities=14% Similarity=0.155 Sum_probs=114.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.+|...+. +|+|+|+++.+++.|+++++.+++. +++++++|+.++... ...++||+|++|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~-~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL-IPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-SCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-hccCCccEEEEC
Confidence 4789999999999999999987544 9999999999999999999999986 599999999987531 114789999998
Q ss_pred Cc------------------------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeec
Q 022962 200 AV------------------------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 255 (289)
Q Consensus 200 ~~------------------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~ 255 (289)
.. .++..+++.+.++|+|||++++..+.....++. ..++..|+...++..+.
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---~~l~~~~~~~~~~~~v~- 202 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDII---DIMRKYRLEPKRIQFVH- 202 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHH---HHHHHTTEEEEEEEEEE-
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHH---HHHHHCCCceEEEEEee-
Confidence 31 235689999999999999999988776666654 45668899999888763
Q ss_pred CCCC--CceEEEEEEec
Q 022962 256 QSPF--GQRTAVVCLKS 270 (289)
Q Consensus 256 ~~~~--~~r~lv~~~k~ 270 (289)
+.+. ..+.++..+|.
T Consensus 203 ~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 203 PRSDREANTVLVEGIKD 219 (259)
T ss_dssp SSTTSCCSEEEEEEEET
T ss_pred cCCCCCcEEEEEEEEeC
Confidence 4333 34555555554
No 8
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.82 E-value=2.6e-19 Score=149.72 Aligned_cols=144 Identities=16% Similarity=0.043 Sum_probs=107.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.+++.+|.. +.+|+|+|+|+.+++.|+++++.++++++++++++.+++... .+++||+|+++.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~--~~~~fD~v~~~~ 97 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY--VREPIRAAIFNL 97 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT--CCSCEEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh--ccCCcCEEEEeC
Confidence 4789999999999999999976 789999999999999999999999988899999888875422 147899999981
Q ss_pred -------------cccHHHHHHHHccccccCeEEEEEEcC---C---cHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCc
Q 022962 201 -------------VAEMRILAEYCLPLVRVGGLFVAAKGH---D---PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ 261 (289)
Q Consensus 201 -------------~~~~~~ll~~~~~~LkpgG~l~~~~g~---~---~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 261 (289)
......+++++.++|||||++++..-. . ..+.+....+.+...+|.+....++. .....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~ 175 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN--QINTP 175 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS--CSSCC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc--cCCCC
Confidence 134467889999999999999876422 1 12233334444444567777766542 33455
Q ss_pred eEEEEEEec
Q 022962 262 RTAVVCLKS 270 (289)
Q Consensus 262 r~lv~~~k~ 270 (289)
..+++++|+
T Consensus 176 ~~~~~i~~~ 184 (185)
T 3mti_A 176 PFLVMLEKL 184 (185)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEec
Confidence 667777664
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.79 E-value=3.5e-18 Score=151.80 Aligned_cols=100 Identities=14% Similarity=0.196 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
++.+|||||||+|..++.+++.. ++++|+|||+|+.|++.|+++++..+.. +|+++++|+.+++. ++||+|+
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-----~~~d~v~ 144 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-----ENASMVV 144 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-----CSEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-----cccccce
Confidence 58899999999999999999874 5789999999999999999999888764 69999999998865 5699999
Q ss_pred EcCc------ccHHHHHHHHccccccCeEEEEEE
Q 022962 198 ARAV------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 198 sn~~------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
++.+ .+...++++++++|||||.|++..
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 9842 245679999999999999999753
No 10
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.79 E-value=4.1e-18 Score=146.10 Aligned_cols=128 Identities=13% Similarity=0.057 Sum_probs=105.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.+++.+|...|+.+|+|+|+|+.+++.|+++++..+++|++++++|+.++... ..+++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY-FEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT-SCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh-cCCCCCCEEEEEC
Confidence 367999999999999999999999999999999999999999999999988999999999886521 0136899999985
Q ss_pred ccc------------HHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 201 VAE------------MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 201 ~~~------------~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
... ...+++.+.++|+|||.+++..+. ......+.+.+...||....+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--RGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--HHHHHHHHHHHHHCCCeeeecc
Confidence 332 368999999999999999987643 2233455566778899877664
No 11
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=2.6e-18 Score=147.02 Aligned_cols=143 Identities=14% Similarity=0.082 Sum_probs=112.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.++..++... |..+|+|+|+|+.+++.+++++...++.+++++++|+.+++.. +++||+|+++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~~ 113 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP---DNTVDFIFMA 113 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC---SSCEEEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC---CCCeeEEEee
Confidence 47899999999999999999885 7789999999999999999999999988999999999987643 3789999998
Q ss_pred C----cccHHHHHHHHccccccCeEEEEEEcCC----------cHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEE
Q 022962 200 A----VAEMRILAEYCLPLVRVGGLFVAAKGHD----------PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAV 265 (289)
Q Consensus 200 ~----~~~~~~ll~~~~~~LkpgG~l~~~~g~~----------~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv 265 (289)
. +.+...+++++.++|+|||.+++..-.. ......++.+.++..||++++...+ ......+
T Consensus 114 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-----~~~~~~~ 188 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV-----GKYCFGV 188 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE-----TTTEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee-----CCceEEE
Confidence 4 3467899999999999999999864210 0011234555677999998887644 2345566
Q ss_pred EEEecC
Q 022962 266 VCLKSR 271 (289)
Q Consensus 266 ~~~k~~ 271 (289)
+++|..
T Consensus 189 ~~~k~~ 194 (219)
T 3dh0_A 189 YAMIVK 194 (219)
T ss_dssp EEECC-
T ss_pred EEEecc
Confidence 666653
No 12
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.78 E-value=9.1e-18 Score=143.48 Aligned_cols=125 Identities=17% Similarity=0.128 Sum_probs=105.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.+|.. +.+|+|+|+|+.+++.|+++++.++++ +++++++|+.+.... ..+||+|+++
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~---~~~~D~v~~~ 129 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD---LPLPEAVFIG 129 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT---SCCCSEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc---CCCCCEEEEC
Confidence 4789999999999999999976 789999999999999999999999998 899999999884322 2579999999
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
...+.+ +++++.++|||||++++... ..+....+.+.+++.|+++.++...
T Consensus 130 ~~~~~~-~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~l~~~g~~i~~i~~~ 180 (204)
T 3njr_A 130 GGGSQA-LYDRLWEWLAPGTRIVANAV--TLESETLLTQLHARHGGQLLRIDIA 180 (204)
T ss_dssp SCCCHH-HHHHHHHHSCTTCEEEEEEC--SHHHHHHHHHHHHHHCSEEEEEEEE
T ss_pred CcccHH-HHHHHHHhcCCCcEEEEEec--CcccHHHHHHHHHhCCCcEEEEEee
Confidence 766677 99999999999999998653 2455566677788999988877643
No 13
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.78 E-value=2.1e-18 Score=145.51 Aligned_cols=146 Identities=14% Similarity=0.044 Sum_probs=109.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.++... |..+|+|+|+|+.+++.|+++++.+++ .+++++++|+.++... .+++||+|++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~ 99 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY--IDCPVKAVMF 99 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT--CCSCEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh--ccCCceEEEE
Confidence 47899999999999999999875 667999999999999999999999988 5799999999887532 2378999999
Q ss_pred cCcc-------------cHHHHHHHHccccccCeEEEEEEc---CCcHHH---HHHHHHHHHHhCCeEeEEeeeecCCCC
Q 022962 199 RAVA-------------EMRILAEYCLPLVRVGGLFVAAKG---HDPQEE---VKNSERAVQLMGASLLQLCSVESQSPF 259 (289)
Q Consensus 199 n~~~-------------~~~~ll~~~~~~LkpgG~l~~~~g---~~~~~e---i~~~~~~l~~~g~~~~~~~~~~~~~~~ 259 (289)
+..- +...+++++.++|||||++++..- ....++ +....+.+...+|.+.....+ ....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~--~~~~ 177 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFI--NQAN 177 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEET--TCCS
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEec--cCcc
Confidence 8411 346799999999999999998642 122223 333333334456777666544 2334
Q ss_pred CceEEEEEEec
Q 022962 260 GQRTAVVCLKS 270 (289)
Q Consensus 260 ~~r~lv~~~k~ 270 (289)
....+++.++.
T Consensus 178 ~pp~~~~~~~~ 188 (197)
T 3eey_A 178 CPPILVCIEKI 188 (197)
T ss_dssp CCCEEEEEEEC
T ss_pred CCCeEEEEEEc
Confidence 56677777776
No 14
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.78 E-value=1.2e-17 Score=141.94 Aligned_cols=120 Identities=14% Similarity=0.120 Sum_probs=102.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.+++.++...|..+|+|+|+|+.+++.|+++++.+++++++++++|+.+.... .++||+|+++.
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D~i~~~~ 116 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD---LPDPDRVFIGG 116 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT---SCCCSEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc---CCCCCEEEECC
Confidence 478999999999999999999988899999999999999999999999988899999999664332 26799999985
Q ss_pred -cccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCC
Q 022962 201 -VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 245 (289)
Q Consensus 201 -~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~ 245 (289)
..++..+++++.++|+|||++++... ..+....+.+.+++.||
T Consensus 117 ~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 117 SGGMLEEIIDAVDRRLKSEGVIVLNAV--TLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp CTTCHHHHHHHHHHHCCTTCEEEEEEC--BHHHHHHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHhcCCCeEEEEEec--ccccHHHHHHHHHHCCC
Confidence 45788999999999999999998643 23445556677889998
No 15
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=4.9e-18 Score=150.52 Aligned_cols=148 Identities=17% Similarity=0.229 Sum_probs=113.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH---cCCC-CEEEEeccccccCCC----CcCCCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL---TQLL-NVQIVRGRAETLGKD----VSFREQ 192 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~---~~l~-ni~~~~~d~~~~~~~----~~~~~~ 192 (289)
++.+|||+|||+|.+++.++...|+.+|+|+|+++.+++.|+++++. +++. +++++++|+.++... ...+++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 36799999999999999999998889999999999999999999988 8876 599999999886210 011368
Q ss_pred ceEEEEcCc----------------------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEE
Q 022962 193 YDVAVARAV----------------------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 193 fD~V~sn~~----------------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
||+|++|.. ..+..+++.+.++|||||+|+++.+....+++. +.++.. |...++
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---~~l~~~-~~~~~i 191 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEII---AACGSR-FGGLEI 191 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHH---HHHTTT-EEEEEE
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHH---HHHHhc-CCceEE
Confidence 999999821 136789999999999999999988776655543 444453 777777
Q ss_pred eeeecCCCC--CceEEEEEEecCCC
Q 022962 251 CSVESQSPF--GQRTAVVCLKSRRT 273 (289)
Q Consensus 251 ~~~~~~~~~--~~r~lv~~~k~~~~ 273 (289)
..+ ++... ..+.++..+|...+
T Consensus 192 ~~v-~~~~~~~~~~~lv~~~k~~~~ 215 (260)
T 2ozv_A 192 TLI-HPRPGEDAVRMLVTAIKGSRA 215 (260)
T ss_dssp EEE-ESSTTSCCCEEEEEEEETCCC
T ss_pred EEE-cCCCCCCceEEEEEEEeCCCC
Confidence 655 34333 44556666664433
No 16
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.77 E-value=1e-17 Score=144.09 Aligned_cols=126 Identities=17% Similarity=0.085 Sum_probs=102.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||||||+|.+++.+|..+|+.+|+|||+|+.+++.|+++++..++.|++++++|+.++... ..+++||.|+++..
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~-~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDV-FEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHH-CCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh-cCcCCcCEEEEECC
Confidence 67999999999999999999999999999999999999999999999998999999999886410 01368999998732
Q ss_pred cc------------HHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEE
Q 022962 202 AE------------MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 202 ~~------------~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
.+ ...+++++.++|||||.+++.... ......+.+.+...||....+
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--RGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCccccc
Confidence 11 368999999999999999987643 222334455667889877654
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.76 E-value=1.1e-17 Score=142.26 Aligned_cols=124 Identities=19% Similarity=0.309 Sum_probs=103.5
Q ss_pred eEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEcC--
Q 022962 124 KLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVARA-- 200 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn~-- 200 (289)
+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.|+++++..++. +++++++|+.+++.. +++||+|+++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~~~~l 121 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE---DNYADLIVSRGSV 121 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC---TTCEEEEEEESCG
T ss_pred EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC---cccccEEEECchH
Confidence 9999999999999999987 7789999999999999999999998875 799999999987643 37899999985
Q ss_pred --cccHHHHHHHHccccccCeEEEEEEcCCc---------------------------HHHHHHHHHHHHHhCCeEeEEe
Q 022962 201 --VAEMRILAEYCLPLVRVGGLFVAAKGHDP---------------------------QEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 201 --~~~~~~ll~~~~~~LkpgG~l~~~~g~~~---------------------------~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
+.+...+++++.++|+|||.+++...... .....++.+.++++||+.+++.
T Consensus 122 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 122 FFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 35778999999999999999998642211 1122456677889999888775
No 18
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.75 E-value=8.3e-17 Score=138.29 Aligned_cols=142 Identities=15% Similarity=0.076 Sum_probs=100.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|..+..+|...+..+|+|+|+|+.|++.+.+.++.. .|+.++.+|+.+......+.++||+|+++.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 478999999999999999998877789999999999988777776654 479999999876421011237899999984
Q ss_pred cc--cHHHHHHHHccccccCeEEEEEEcC------CcHHHHH-HHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEE
Q 022962 201 VA--EMRILAEYCLPLVRVGGLFVAAKGH------DPQEEVK-NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCL 268 (289)
Q Consensus 201 ~~--~~~~ll~~~~~~LkpgG~l~~~~g~------~~~~ei~-~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~ 268 (289)
.. ....+++++.++|||||+|++.... ...+++. ...+.+++. |++.+.... .+++..+++++.
T Consensus 135 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~---~p~~~~h~~~~~ 207 (210)
T 1nt2_A 135 AQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL---MPYHRDHIFIHA 207 (210)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC---TTTCTTEEEEEE
T ss_pred cChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC---CCCCCCcEEEEE
Confidence 32 2345689999999999999987411 1223331 222336677 988887654 244444544443
No 19
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.75 E-value=3e-17 Score=139.42 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=100.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.+++.++. .+..+|+|+|+|+.+++.|+++++..++.+++++++|+.+.. +++||+|+++..
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~fD~i~~~~~ 134 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-----DGKFDLIVANIL 134 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-----CSCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-----CCCceEEEECCc
Confidence 67999999999999999886 466799999999999999999999999878999999997753 278999999864
Q ss_pred -ccHHHHHHHHccccccCeEEEEEE-cCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 202 -AEMRILAEYCLPLVRVGGLFVAAK-GHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 202 -~~~~~ll~~~~~~LkpgG~l~~~~-g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
..+..+++++.++|+|||++++.. .....++ +.+.++..||.++++.
T Consensus 135 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~---~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 135 AEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPK---IEQALAENSFQIDLKM 183 (205)
T ss_dssp HHHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHH---HHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEecCcccHHH---HHHHHHHcCCceEEee
Confidence 456889999999999999999853 3333444 4456678999888765
No 20
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.75 E-value=2.6e-17 Score=143.57 Aligned_cols=133 Identities=17% Similarity=0.129 Sum_probs=103.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+++|.+|||+|||+|..+..+|... |.++|+|+|++++|++.++++++.. .|+..+.+|+.+........+++|+|+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccccccceEEEEE
Confidence 4569999999999999999999874 8899999999999999999887654 489999998876543323357899999
Q ss_pred EcC--cccHHHHHHHHccccccCeEEEEEEcC-------CcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 198 ARA--VAEMRILAEYCLPLVRVGGLFVAAKGH-------DPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 198 sn~--~~~~~~ll~~~~~~LkpgG~l~~~~g~-------~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+.- ..+...++.++.++|||||++++..-. .....+....+.++..||++.+...+
T Consensus 153 ~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 153 ADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EeccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 863 235578999999999999999875311 12233444556678899999888765
No 21
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.75 E-value=5.2e-17 Score=140.97 Aligned_cols=127 Identities=12% Similarity=0.049 Sum_probs=103.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|||||||+|++++.+|+..|..+|+|+|+|+.+++.|++|++.+|+++ |+++++|..+.-.. .++||+|+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~---~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE---TDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---CcCCCEEEE
Confidence 35789999999999999999998888899999999999999999999999974 99999999653221 136998886
Q ss_pred cCc-c-cHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 199 RAV-A-EMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 199 n~~-~-~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
..+ . -+..+++.+...|+++|+|++.. ....+.+.. .+...||.+.+...+
T Consensus 91 aG~Gg~~i~~Il~~~~~~L~~~~~lVlq~-~~~~~~vr~---~L~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 91 AGMGGRLIARILEEGLGKLANVERLILQP-NNREDDLRI---WLQDHGFQIVAESIL 143 (225)
T ss_dssp EEECHHHHHHHHHHTGGGCTTCCEEEEEE-SSCHHHHHH---HHHHTTEEEEEEEEE
T ss_pred cCCChHHHHHHHHHHHHHhCCCCEEEEEC-CCCHHHHHH---HHHHCCCEEEEEEEE
Confidence 543 2 37899999999999999998744 455555544 566899999887655
No 22
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.74 E-value=2.8e-17 Score=144.03 Aligned_cols=130 Identities=13% Similarity=0.177 Sum_probs=105.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||||||+|.++..++...+. +|+|+|+|+.+++.+++++...++.+ ++++++|+.+++.. +++||+|++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~ 120 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ---NEELDLIWS 120 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC---TTCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC---CCCEEEEEe
Confidence 34789999999999999999998764 99999999999999999999999875 99999999887643 378999999
Q ss_pred cCc---ccHHHHHHHHccccccCeEEEEEEc----CCcHH--------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 199 RAV---AEMRILAEYCLPLVRVGGLFVAAKG----HDPQE--------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 199 n~~---~~~~~ll~~~~~~LkpgG~l~~~~g----~~~~~--------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+.+ .+...+++++.++|||||++++... ..... ...++.+.++.+||.+++...+
T Consensus 121 ~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 196 (257)
T 3f4k_A 121 EGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFIL 196 (257)
T ss_dssp ESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEEC
T ss_pred cChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 842 2688999999999999999998642 11111 1234566778999998886543
No 23
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.74 E-value=2.2e-17 Score=146.36 Aligned_cols=131 Identities=14% Similarity=0.170 Sum_probs=108.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++...|+.+|+|+|+|+.+++.+++++...++.+++++++|+.+++.. +++||+|+++.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 113 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFE---DSSFDHIFVCF 113 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSC---TTCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCC---CCCeeEEEEec
Confidence 478999999999999999999988999999999999999999999999988999999999987643 37899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCC--------cHHH--------------------HHHHHHHHHHhCCeEe
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHD--------PQEE--------------------VKNSERAVQLMGASLL 248 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~--------~~~e--------------------i~~~~~~l~~~g~~~~ 248 (289)
+.+...+++++.++|||||++++..... .... ...+...++.+||..+
T Consensus 114 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 114 VLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeE
Confidence 4577899999999999999999865211 0000 1234557889999988
Q ss_pred EEeeee
Q 022962 249 QLCSVE 254 (289)
Q Consensus 249 ~~~~~~ 254 (289)
++....
T Consensus 194 ~~~~~~ 199 (276)
T 3mgg_A 194 RVEPRM 199 (276)
T ss_dssp EEEEEE
T ss_pred EEeeEE
Confidence 887553
No 24
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.74 E-value=7.2e-17 Score=140.41 Aligned_cols=127 Identities=9% Similarity=0.009 Sum_probs=104.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|+|||||+|++++.+|+..|..+|+|+|+++.+++.|++|++.+|+.+ |++.++|..+...+ .++||+|+.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~---~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE---ADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---ccccCEEEE
Confidence 35789999999999999999988778899999999999999999999999975 99999999876532 137999874
Q ss_pred cC-c-ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 199 RA-V-AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 199 n~-~-~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.+ . .-+..+++.....|+++|+|++ .+....+.+. +.+.+.||.+.+...+
T Consensus 97 aGmGg~lI~~IL~~~~~~l~~~~~lIl-qp~~~~~~lr---~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 97 CGMGGRLIADILNNDIDKLQHVKTLVL-QPNNREDDLR---KWLAANDFEIVAEDIL 149 (230)
T ss_dssp EEECHHHHHHHHHHTGGGGTTCCEEEE-EESSCHHHHH---HHHHHTTEEEEEEEEE
T ss_pred eCCchHHHHHHHHHHHHHhCcCCEEEE-ECCCChHHHH---HHHHHCCCEEEEEEEE
Confidence 43 3 3478999999999999999876 4444555554 4566899999988765
No 25
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=2.3e-17 Score=145.86 Aligned_cols=129 Identities=16% Similarity=0.160 Sum_probs=105.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.++.. +..+|+|+|+|+.+++.++++++..++. +++++++|+.+++.. +++||+|+++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~i~~~ 121 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR---NEELDLIWSE 121 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC---TTCEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC---CCCEEEEEEc
Confidence 4789999999999999999976 7789999999999999999999999885 599999999887643 3789999998
Q ss_pred Cc---ccHHHHHHHHccccccCeEEEEEEc----CCcHH--------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 200 AV---AEMRILAEYCLPLVRVGGLFVAAKG----HDPQE--------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~~---~~~~~ll~~~~~~LkpgG~l~~~~g----~~~~~--------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.+ .++..+++++.++|||||++++... ..... ...++.+.++++||.++++..+
T Consensus 122 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 196 (267)
T 3kkz_A 122 GAIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFIL 196 (267)
T ss_dssp SCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 52 2678999999999999999998642 11111 1234566788999998887654
No 26
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.74 E-value=5.6e-17 Score=140.70 Aligned_cols=145 Identities=18% Similarity=0.130 Sum_probs=105.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.+++.+|...+..+|+|+|+|+.+++.++++++.. .|+.++++|+.+......+.++||+|+...
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIVEKVDVIYEDV 151 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTSCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccCccEEEEEEec
Confidence 478999999999999999999877789999999999999999987765 589999999987211001236899999653
Q ss_pred cc--cHHHHHHHHccccccCeEEEEEEc---CCc---HHH-H-HHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEec
Q 022962 201 VA--EMRILAEYCLPLVRVGGLFVAAKG---HDP---QEE-V-KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 201 ~~--~~~~ll~~~~~~LkpgG~l~~~~g---~~~---~~e-i-~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
.. ....+++++.++|||||++++... ... ... . .++. .+...||.+++...+. ........++++|+
T Consensus 152 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~--~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 152 AQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIE--PFEKDHVMFVGIWE 228 (230)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECT--TTSTTEEEEEEEEC
T ss_pred CChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccC--CCccceEEEEEEeC
Confidence 21 237789999999999999998521 111 111 1 2333 6778899988876542 12244566666664
No 27
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.74 E-value=1.7e-17 Score=145.27 Aligned_cols=126 Identities=14% Similarity=0.148 Sum_probs=103.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|..+..++... +.+|+|+|+|+.+++.++++++..++. +++++++|+++++. +++||+|+++
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~V~~~ 110 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA----NEKCDVAACV 110 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC----SSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc----CCCCCEEEEC
Confidence 47899999999999999999876 679999999999999999999998885 79999999998754 3789999987
Q ss_pred C----cccHHHHHHHHccccccCeEEEEEEcC----CcHH---------------HHHHHHHHHHHhCCeEeEEe
Q 022962 200 A----VAEMRILAEYCLPLVRVGGLFVAAKGH----DPQE---------------EVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 200 ~----~~~~~~ll~~~~~~LkpgG~l~~~~g~----~~~~---------------ei~~~~~~l~~~g~~~~~~~ 251 (289)
. ..+...+++++.++|||||++++.... .... ...++.+.++++||..+++.
T Consensus 111 ~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 111 GATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp SCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEE
T ss_pred CChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 4 346789999999999999999986421 1111 12345667788999887764
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.74 E-value=2.3e-17 Score=145.21 Aligned_cols=128 Identities=16% Similarity=0.195 Sum_probs=103.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++... .+|+|+|+|+.+++.++++++..++.+++++++|+++++.. +++||+|+++.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~---~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT---DERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC---TTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC---CCCEEEEEEhh
Confidence 47899999999999999998774 49999999999999999999998888999999999987643 37899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEc--CCcH--------------------HHHHHHHHHHHHhCCeEeEEeee
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKG--HDPQ--------------------EEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g--~~~~--------------------~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+.+...+++++.++|||||++++... +... ....++.+.++..||.+..+...
T Consensus 112 ~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 112 AAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 45778999999999999999998531 1110 01134556778899998777654
No 29
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.74 E-value=1.2e-18 Score=147.97 Aligned_cols=143 Identities=16% Similarity=0.170 Sum_probs=90.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC-CcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD-VSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~-~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.++...++.+|+|+|+|+.+++.+++++..++. +++++++|+.+.... ....++||+|++|
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 47899999999999999999998889999999999999999999998887 899999999873210 0012689999997
Q ss_pred Cc----c--------------------------cHHHHHHHHccccccCeE-EEEEEcCCcHHHHHHHHHHHH--HhCCe
Q 022962 200 AV----A--------------------------EMRILAEYCLPLVRVGGL-FVAAKGHDPQEEVKNSERAVQ--LMGAS 246 (289)
Q Consensus 200 ~~----~--------------------------~~~~ll~~~~~~LkpgG~-l~~~~g~~~~~ei~~~~~~l~--~~g~~ 246 (289)
.. . .+..+++.+.++|||||+ +++..+....+++.. .+. ..||.
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---~l~~~~~gf~ 185 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVAR---LFAPWRERGF 185 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHH---HTGGGGGGTE
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHH---HHHHhhcCCc
Confidence 21 0 127889999999999999 777777666666544 455 67887
Q ss_pred EeEEeeeecCCCCCceEEEEEEecC
Q 022962 247 LLQLCSVESQSPFGQRTAVVCLKSR 271 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~r~lv~~~k~~ 271 (289)
.+++.. ...+....++.++..
T Consensus 186 ~~~~~~----~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 186 RVRKVK----DLRGIDRVIAVTREP 206 (215)
T ss_dssp ECCEEE----CTTSCEEEEEEEECC
T ss_pred eEEEEE----ecCCCEEEEEEEEcC
Confidence 666542 334444555555543
No 30
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.74 E-value=1.3e-16 Score=139.89 Aligned_cols=127 Identities=9% Similarity=0.016 Sum_probs=103.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|||||||+|++++.+|+..|..+|+|+|+|+.+++.|++|++.+|+.+ |++.++|..+...+ .++||+|++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~---~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK---KDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---cccccEEEE
Confidence 35789999999999999999988778899999999999999999999999975 99999999876432 136999875
Q ss_pred c-Ccc-cHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 199 R-AVA-EMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 199 n-~~~-~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
. .-. -+..+++.+...|+++|+|++. +....+.+. +.+.+.||.+.+...+
T Consensus 97 agmGg~lI~~IL~~~~~~L~~~~~lIlq-~~~~~~~lr---~~L~~~Gf~i~~E~lv 149 (244)
T 3gnl_A 97 AGMGGTLIRTILEEGAAKLAGVTKLILQ-PNIAAWQLR---EWSEQNNWLITSEAIL 149 (244)
T ss_dssp EEECHHHHHHHHHHTGGGGTTCCEEEEE-ESSCHHHHH---HHHHHHTEEEEEEEEE
T ss_pred eCCchHHHHHHHHHHHHHhCCCCEEEEE-cCCChHHHH---HHHHHCCCEEEEEEEE
Confidence 4 333 4789999999999999998864 444555554 4566899999887655
No 31
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.73 E-value=3.7e-17 Score=146.29 Aligned_cols=125 Identities=16% Similarity=0.168 Sum_probs=104.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|||+|||+|.+++.+|...+. +|+|+|+|+.+++.|++|++.+++++ ++++++|+.++.. +++||+|++
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----~~~fD~Vi~ 198 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----ENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----CSCEEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc----cCCccEEEE
Confidence 45889999999999999999988544 89999999999999999999999876 9999999998764 378999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEcC----CcHHHHHHHHHHHHHhCCeEeE
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKGH----DPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g~----~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
+.......+++.+.++|+|||.+++.... ........+.+.++..|+.+..
T Consensus 199 ~~p~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 199 GYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CCCSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CCchhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 98777788999999999999999986532 1123344556677789998765
No 32
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.73 E-value=3.1e-17 Score=141.86 Aligned_cols=99 Identities=20% Similarity=0.349 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++...|+.+|+|+|+|+.+++.++++....+ +++++++|+.+++.. ++||+|+++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~----~~fD~v~~~~ 117 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE----EKYDMVVSAL 117 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC----SCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC----CCceEEEEeC
Confidence 3789999999999999999999989999999999999999999876655 899999999987643 7899999984
Q ss_pred c----cc--HHHHHHHHccccccCeEEEEEE
Q 022962 201 V----AE--MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~----~~--~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ .+ ...+++++.++|||||.+++..
T Consensus 118 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 118 SIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 22 3369999999999999999865
No 33
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.73 E-value=1.4e-17 Score=149.77 Aligned_cols=144 Identities=13% Similarity=0.083 Sum_probs=104.5
Q ss_pred CCCCCCeEEEEcCCCChHH-HHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 118 SCNSNLKLVDVGTGAGLPG-LVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~-l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
.++++.+|||||||+|.++ +.+| ..++++|+|||+|+++++.|+++++..|+++++++++|+.+++ +++||+|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA-~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-----d~~FDvV 192 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLS-HVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-----GLEFDVL 192 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHH-HTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-----GCCCSEE
T ss_pred CCCCcCEEEEECCCccHHHHHHHH-HccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-----CCCcCEE
Confidence 3456899999999998665 4555 4568999999999999999999999989888999999999875 2789999
Q ss_pred EEcCc-ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEec
Q 022962 197 VARAV-AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 197 ~sn~~-~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
++.+. .+...+++++.++|||||++++........-+..........||..... .+|........++++|.
T Consensus 193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf~~~~~---~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGFRRAGV---VLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp EECTTCSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTEEEEEE---ECCCTTCCCEEEEEEEC
T ss_pred EECCCccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhhhheeE---ECCCCCcCcEEEEEEcc
Confidence 98754 5788999999999999999998664321110000000001247765433 34555555666666554
No 34
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=8.9e-17 Score=132.78 Aligned_cols=127 Identities=15% Similarity=0.080 Sum_probs=102.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.++..+|+.+|+|+|+|+.+++.|+++++.++++ ++ ++++|+.+.-. ...++||+|+++
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~--~~~~~~D~i~~~ 101 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD--DVPDNPDVIFIG 101 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG--GCCSCCSEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh--ccCCCCCEEEEC
Confidence 367999999999999999998888899999999999999999999999987 79 88888854211 112689999998
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEee
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS 252 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~ 252 (289)
.......+++.+.++|+|||++++.... .+....+...++..|+.+.++..
T Consensus 102 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 102 GGLTAPGVFAAAWKRLPVGGRLVANAVT--VESEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp C-TTCTTHHHHHHHTCCTTCEEEEEECS--HHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CcccHHHHHHHHHHhcCCCCEEEEEeec--cccHHHHHHHHHHcCCeeEEEEe
Confidence 7555588999999999999999876532 33444556677788988776653
No 35
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.73 E-value=4.9e-17 Score=141.67 Aligned_cols=128 Identities=13% Similarity=0.200 Sum_probs=103.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++... .+|+|+|+|+.+++.+++++...++.+++++++|+++++.. +++||+|+++.
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~v~~~~ 95 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFP---DDSFDIITCRY 95 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSC---TTCEEEEEEES
T ss_pred CCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCC---CCcEEEEEECC
Confidence 57899999999999999998764 59999999999999999999998888999999999987643 37899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCC-cHH---------------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHD-PQE---------------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~-~~~---------------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+.+...+++++.++|||||++++..... ... ...++.+.++.+||.++++...
T Consensus 96 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 96 AAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred chhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 3578899999999999999999864211 001 1234556677899988777654
No 36
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=1.7e-16 Score=137.48 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=84.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.++++....+. +++++++|+.+++. .++||+|+++.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----~~~fD~v~~~~~ 110 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI----NRKFDLITCCLD 110 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC----SCCEEEEEECTT
T ss_pred CCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc----cCCceEEEEcCc
Confidence 679999999999999998876 57999999999999999999988876 79999999988754 26899999975
Q ss_pred ----c---ccHHHHHHHHccccccCeEEEEE
Q 022962 201 ----V---AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ----~---~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+ .+...+++++.++|+|||.+++.
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 45789999999999999999973
No 37
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.72 E-value=3.6e-17 Score=147.18 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=103.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC------------------------------
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL------------------------------ 170 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l------------------------------ 170 (289)
++.+|||||||+|.+++.+|..++..+|+|||+|+.+++.|+++++..+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 37899999999999999999998889999999999999999998765442
Q ss_pred ----------------------------CCEEEEeccccccCCC--CcCCCCceEEEEcCcc----------cHHHHHHH
Q 022962 171 ----------------------------LNVQIVRGRAETLGKD--VSFREQYDVAVARAVA----------EMRILAEY 210 (289)
Q Consensus 171 ----------------------------~ni~~~~~d~~~~~~~--~~~~~~fD~V~sn~~~----------~~~~ll~~ 210 (289)
.||+++++|+.+.... ....++||+|+|+.+- .+..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 3799999999754310 0124789999998753 67789999
Q ss_pred HccccccCeEEEEEEcCC--------cHHHH-----------HHHHHHHHH--hCCeEeEEeeeec-CCCCCceEEEEEE
Q 022962 211 CLPLVRVGGLFVAAKGHD--------PQEEV-----------KNSERAVQL--MGASLLQLCSVES-QSPFGQRTAVVCL 268 (289)
Q Consensus 211 ~~~~LkpgG~l~~~~g~~--------~~~ei-----------~~~~~~l~~--~g~~~~~~~~~~~-~~~~~~r~lv~~~ 268 (289)
+.++|+|||+|+++.... ..+++ .++...+.. .||+.+++..... ....-.|.+.+++
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~~~~~~g~~r~i~~~~ 285 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVYLFH 285 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-----------CCCEEEE
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccCCCCCCCccceEEEEE
Confidence 999999999999864211 01111 123445666 8998777654321 1122345667777
Q ss_pred ec
Q 022962 269 KS 270 (289)
Q Consensus 269 k~ 270 (289)
|.
T Consensus 286 k~ 287 (292)
T 3g07_A 286 KA 287 (292)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 38
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.72 E-value=1.5e-16 Score=143.06 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=84.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC---CCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL---LNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l---~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+.+|||||||+|.++..++.. +.+|+|+|+|+.+++.|++++...++ .+++++++|+.+++. +++||+|++
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~ 156 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL----DKRFGTVVI 156 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC----SCCEEEEEE
T ss_pred CCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc----CCCcCEEEE
Confidence 459999999999999999876 57999999999999999999988764 579999999998764 378999986
Q ss_pred cC-----c--ccHHHHHHHHccccccCeEEEEEE
Q 022962 199 RA-----V--AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 199 n~-----~--~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.. . .+...+++++.++|+|||+|++..
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 51 1 246899999999999999999864
No 39
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.71 E-value=1.4e-16 Score=135.68 Aligned_cols=138 Identities=16% Similarity=0.159 Sum_probs=104.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++. +++++++|+.+++. +++||+|+++.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~----~~~fD~v~~~~ 110 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLDA----IDAYDAVWAHA 110 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCC----CSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCCC----CCcEEEEEecC
Confidence 3779999999999999999876 679999999999999999876 46778899988762 47899999985
Q ss_pred c----c--cHHHHHHHHccccccCeEEEEEEcCCcH------------HHHHHHHHHHHHhC-CeEeEEeeeecCCCCC-
Q 022962 201 V----A--EMRILAEYCLPLVRVGGLFVAAKGHDPQ------------EEVKNSERAVQLMG-ASLLQLCSVESQSPFG- 260 (289)
Q Consensus 201 ~----~--~~~~ll~~~~~~LkpgG~l~~~~g~~~~------------~ei~~~~~~l~~~g-~~~~~~~~~~~~~~~~- 260 (289)
+ . ++..+++++.++|||||++++....... ....++.+.++.+| |+++++.........+
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~ 190 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQE 190 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSC
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCC
Confidence 2 2 6779999999999999999987532110 12344556677999 9999887665333332
Q ss_pred -ceEEEEEEec
Q 022962 261 -QRTAVVCLKS 270 (289)
Q Consensus 261 -~r~lv~~~k~ 270 (289)
...+.++.+.
T Consensus 191 ~~~wl~~~~~~ 201 (211)
T 3e23_A 191 LAQFLHVSVRK 201 (211)
T ss_dssp EEEEEEEEEEC
T ss_pred CceEEEEEEec
Confidence 3344555444
No 40
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.71 E-value=6.4e-17 Score=138.31 Aligned_cols=128 Identities=16% Similarity=0.127 Sum_probs=97.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~sn~ 200 (289)
+.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++ .++.+.++|+.++.... ...++||+|+++.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEECc
Confidence 679999999999999998866 67999999999999999886 36778888888872211 1235699999985
Q ss_pred ---cccHHHHHHHHccccccCeEEEEEEcCC-----------------------------cHHHHHHHHHHHHHhCCeEe
Q 022962 201 ---VAEMRILAEYCLPLVRVGGLFVAAKGHD-----------------------------PQEEVKNSERAVQLMGASLL 248 (289)
Q Consensus 201 ---~~~~~~ll~~~~~~LkpgG~l~~~~g~~-----------------------------~~~ei~~~~~~l~~~g~~~~ 248 (289)
..+...+++++.++|+|||++++..... ......++.+.++.+||.++
T Consensus 125 ~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 125 ALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp CCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred hhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 3567899999999999999999865210 00023556667789999999
Q ss_pred EEeeeecCC
Q 022962 249 QLCSVESQS 257 (289)
Q Consensus 249 ~~~~~~~~~ 257 (289)
++.....+.
T Consensus 205 ~~~~~~~~~ 213 (227)
T 3e8s_A 205 SLQEPQHPQ 213 (227)
T ss_dssp EEECCCCTT
T ss_pred EEecCCCCC
Confidence 887543333
No 41
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.71 E-value=2e-16 Score=138.02 Aligned_cols=145 Identities=14% Similarity=0.062 Sum_probs=99.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|||+|||+|..+..+|.. .+.++|+|+|+|+.|+..+.+.++.. .|+.++++|+..........++||+|++
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEEEe
Confidence 45899999999999999999976 46789999999999986666655543 4899999999865321122468999999
Q ss_pred cCc-ccHHH-HHHHHccccccCeEEEEEEcC-------CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceE-EEEEE
Q 022962 199 RAV-AEMRI-LAEYCLPLVRVGGLFVAAKGH-------DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRT-AVVCL 268 (289)
Q Consensus 199 n~~-~~~~~-ll~~~~~~LkpgG~l~~~~g~-------~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~-lv~~~ 268 (289)
+.. .+... +...+.++|||||+|++..-. +..+-.....+.++..||++.+...+ .|+...+ +++.+
T Consensus 153 d~a~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l---~p~~~~h~~v~~~ 229 (232)
T 3id6_C 153 DIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINL---DPYDKDHAIVLSK 229 (232)
T ss_dssp CCCCTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEEC---TTTCSSCEEEEEE
T ss_pred cCCChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEecc---CCCcCceEEEEEE
Confidence 953 34444 445666699999999976311 11111123344566889999988755 3444344 44444
Q ss_pred e
Q 022962 269 K 269 (289)
Q Consensus 269 k 269 (289)
+
T Consensus 230 ~ 230 (232)
T 3id6_C 230 Y 230 (232)
T ss_dssp E
T ss_pred e
Confidence 3
No 42
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.71 E-value=4.4e-17 Score=140.87 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=89.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||||||+|.+++.+|...|+..|+|||+|+.+++.|+++++..+++|++++++|+.++......+++||.|+++..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 67999999999999999999999999999999999999999999999999999999999885110011478999999821
Q ss_pred c------c------HHHHHHHHccccccCeEEEEEEcC
Q 022962 202 A------E------MRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 202 ~------~------~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
. . ...+++.+.++|||||.|++....
T Consensus 115 ~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 115 DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 1 1 136999999999999999987753
No 43
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.71 E-value=2e-16 Score=142.45 Aligned_cols=126 Identities=11% Similarity=0.044 Sum_probs=102.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.++..++ .+|+|+|+|+.+++.|++++...++. +++++++|+.++ +++||+|+++
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~fD~v~~~ 144 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF------DEPVDRIVSL 144 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC------CCCCSEEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc------CCCccEEEEc
Confidence 578999999999999999998866 79999999999999999999999986 799999999876 2789999998
Q ss_pred Cc-------------ccHHHHHHHHccccccCeEEEEEEcC-CcH-------------------------------HHHH
Q 022962 200 AV-------------AEMRILAEYCLPLVRVGGLFVAAKGH-DPQ-------------------------------EEVK 234 (289)
Q Consensus 200 ~~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~-~~~-------------------------------~ei~ 234 (289)
.+ .++..+++++.++|||||++++.... ... ....
T Consensus 145 ~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~ 224 (302)
T 3hem_A 145 GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRIS 224 (302)
T ss_dssp SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHH
T ss_pred chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHH
Confidence 42 23479999999999999999976421 111 0123
Q ss_pred HHHHHHHHhCCeEeEEeee
Q 022962 235 NSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 235 ~~~~~l~~~g~~~~~~~~~ 253 (289)
++.+.++..||.+.++..+
T Consensus 225 ~~~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 225 QVDYYSSNAGWKVERYHRI 243 (302)
T ss_dssp HHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHhCCcEEEEEEeC
Confidence 4566778899998887644
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=9.8e-17 Score=145.34 Aligned_cols=131 Identities=14% Similarity=0.081 Sum_probs=106.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.++.+|||||||+|.+++.++..+ +.+|+|+|+|+.+++.|+++++..++. +++++++|+++++.. +++||+|+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~V~ 190 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD---KGAVTASW 190 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC---TTCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC---CCCEeEEE
Confidence 3457899999999999999999875 579999999999999999999999986 799999999987643 37899999
Q ss_pred EcCc---ccHHHHHHHHccccccCeEEEEEEcC--C-c------HH-----------HHHHHHHHHHHhCCeEeEEeee
Q 022962 198 ARAV---AEMRILAEYCLPLVRVGGLFVAAKGH--D-P------QE-----------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 198 sn~~---~~~~~ll~~~~~~LkpgG~l~~~~g~--~-~------~~-----------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
++.+ .++..+++++.++|||||++++.... . . .. ...++.+.++++||.++++..+
T Consensus 191 ~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 191 NNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp EESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred ECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 9842 25899999999999999999976521 1 0 00 1244566788999998888754
No 45
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.71 E-value=2.4e-16 Score=136.76 Aligned_cols=131 Identities=18% Similarity=0.132 Sum_probs=98.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.++..++... |..+|+|+|+|+.+++.+.++++.. .|++++++|+.+........++||+|+++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 47899999999999999999875 6789999999999998888888876 58999999998742111124689999998
Q ss_pred Ccc--cHHHHHHHHccccccCeEEEEEEcCC-------cHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 200 AVA--EMRILAEYCLPLVRVGGLFVAAKGHD-------PQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~~~--~~~~ll~~~~~~LkpgG~l~~~~g~~-------~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
... ....++.++.++|||||++++..... ....+..-.+.+++.||.+.+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 217 (233)
T 2ipx_A 155 VAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTL 217 (233)
T ss_dssp CCCTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEEC
T ss_pred CCCccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEec
Confidence 542 23567888999999999999864321 1111222245677889998886654
No 46
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.71 E-value=3e-16 Score=138.73 Aligned_cols=129 Identities=19% Similarity=0.178 Sum_probs=104.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++... +.+|+|+|+|+.+++.+++++...++. +++++++|+.+++.. +++||+|+++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~~ 136 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE---DASFDAVWAL 136 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC---TTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC---CCCccEEEEe
Confidence 47899999999999999999876 689999999999999999999998875 699999999987643 3789999987
Q ss_pred C----cccHHHHHHHHccccccCeEEEEEEc----CCcHH------------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 200 A----VAEMRILAEYCLPLVRVGGLFVAAKG----HDPQE------------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~----~~~~~~ll~~~~~~LkpgG~l~~~~g----~~~~~------------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
. +.+...+++++.++|||||++++... ..... ...++.+.++++||.++++..+
T Consensus 137 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 137 ESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp SCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred chhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 4 45788999999999999999997641 11110 1134566778899998877654
No 47
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=2.4e-16 Score=131.44 Aligned_cols=122 Identities=15% Similarity=0.078 Sum_probs=97.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc-
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR- 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn- 199 (289)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.++++. .+++++++|+.+++.. +++||+|+++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~---~~~~D~i~~~~ 115 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQIS---ETDFDLIVSAG 115 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCC---CCCEEEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCC---CCceeEEEECC
Confidence 3779999999999999999876 579999999999999998864 3689999999886542 3689999997
Q ss_pred Cc------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEee
Q 022962 200 AV------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS 252 (289)
Q Consensus 200 ~~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~ 252 (289)
.+ .+...+++.+.++|+|||.+++..+........++.+.++..||.+.++..
T Consensus 116 ~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 116 NVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEES
T ss_pred cHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeec
Confidence 32 345789999999999999999877554322334455667789999887754
No 48
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.70 E-value=3e-16 Score=139.84 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=104.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHc-CCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLT-QLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~-~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
.++.+|||+|||+|.+++.++.. .|+.+|+++|+++.+++.|+++++.+ |.++++++++|+.+... +++||+|+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~----~~~fD~Vi 184 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS----DQMYDAVI 184 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC----SCCEEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc----CCCccEEE
Confidence 35789999999999999999987 67899999999999999999999988 87789999999987321 36899999
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEee
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS 252 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~ 252 (289)
++. .+...+++.+.++|+|||++++.... .....++.+.++..||...+...
T Consensus 185 ~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~--~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 185 ADI-PDPWNHVQKIASMMKPGSVATFYLPN--FDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp ECC-SCGGGSHHHHHHTEEEEEEEEEEESS--HHHHHHHHHHSGGGTEEEEEEEE
T ss_pred EcC-cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCeEEEEEE
Confidence 964 45578999999999999999987653 23445556667788998877654
No 49
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.70 E-value=1.4e-16 Score=140.59 Aligned_cols=134 Identities=17% Similarity=0.086 Sum_probs=105.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
.++.+|||+|||+|.+++.+++.. .+|+|+|+|+.+++.++++++.++++ ++++++|+.+... +++||+|++|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g--~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~----~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALP----FGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGG----GCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC--CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCc----CCCCCEEEEC
Confidence 457899999999999999988753 39999999999999999999999886 9999999887321 2689999999
Q ss_pred Ccc-cHHHHHHHHccccccCeEEEEEE-cCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEe
Q 022962 200 AVA-EMRILAEYCLPLVRVGGLFVAAK-GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLK 269 (289)
Q Consensus 200 ~~~-~~~~ll~~~~~~LkpgG~l~~~~-g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k 269 (289)
... .+..+++.+.++|+|||++++.. ...+.+ .+.+.++..||.+.++.. .+.+..++++|
T Consensus 192 ~~~~~~~~~l~~~~~~LkpgG~lils~~~~~~~~---~v~~~l~~~Gf~~~~~~~------~~~W~~l~~~k 254 (254)
T 2nxc_A 192 LYAELHAALAPRYREALVPGGRALLTGILKDRAP---LVREAMAGAGFRPLEEAA------EGEWVLLAYGR 254 (254)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEEGGGHH---HHHHHHHHTTCEEEEEEE------ETTEEEEEEEC
T ss_pred CcHHHHHHHHHHHHHHcCCCCEEEEEeeccCCHH---HHHHHHHHCCCEEEEEec------cCCeEEEEEEC
Confidence 654 46789999999999999998743 223333 445567789999887753 24566666553
No 50
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=2.1e-16 Score=133.66 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=97.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.++++ ..+++++++|+.+++.. +++||+|+++.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~---~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDS---PKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGS---CCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccC---CCCeEEEEehhh
Confidence 579999999999999999876 56999999999999999886 34799999999987643 378999999742
Q ss_pred ------ccHHHHHHHHccccccCeEEEEEEcCCc-------------HHHHHHHHHHHHHhCCeEeEEeee
Q 022962 202 ------AEMRILAEYCLPLVRVGGLFVAAKGHDP-------------QEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 202 ------~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------------~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.+...+++++.++|+|||.+++...... .....++.+.++++||+++++...
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 3788999999999999999998652211 011344555677999999988754
No 51
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.70 E-value=3.7e-16 Score=134.42 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=106.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-----CEEEEeccccccCCCCcCCCCce
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-----NVQIVRGRAETLGKDVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-----ni~~~~~d~~~~~~~~~~~~~fD 194 (289)
+++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.+++++...++. +++++++|+.+++.. +++||
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH---DSSFD 103 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC---TTCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC---CCcee
Confidence 35789999999999999999876 679999999999999999998877762 589999999987643 37899
Q ss_pred EEEEcCc----ccHH---HHHHHHccccccCeEEEEEEcCC--------------------------------------c
Q 022962 195 VAVARAV----AEMR---ILAEYCLPLVRVGGLFVAAKGHD--------------------------------------P 229 (289)
Q Consensus 195 ~V~sn~~----~~~~---~ll~~~~~~LkpgG~l~~~~g~~--------------------------------------~ 229 (289)
+|+++.+ .+.. .+++++.++|+|||.+++..... .
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAH 183 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeE
Confidence 9999842 2334 89999999999999999863210 0
Q ss_pred HHHHHHHHHHHHHhCCeEeEEeeeecCCCCCce
Q 022962 230 QEEVKNSERAVQLMGASLLQLCSVESQSPFGQR 262 (289)
Q Consensus 230 ~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r 262 (289)
.-...++.+.++++||+++++.....+...+..
T Consensus 184 ~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~ 216 (235)
T 3sm3_A 184 HFTEKELVFLLTDCRFEIDYFRVKELETRTGNK 216 (235)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCE
T ss_pred eCCHHHHHHHHHHcCCEEEEEEecceeeccCCc
Confidence 011344556777999999998766555444443
No 52
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.70 E-value=5.5e-16 Score=128.10 Aligned_cols=121 Identities=18% Similarity=0.144 Sum_probs=101.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.+++.++. +..+|+|+|+|+.+++.++++++.+++++++++++|+.+ ... +++||+|+++.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~---~~~~D~i~~~~ 108 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLD---KLEFNKAFIGG 108 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGG---GCCCSEEEECS
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-ccc---CCCCcEEEECC
Confidence 377999999999999999987 688999999999999999999999998889999999987 222 26899999997
Q ss_pred cccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 201 VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 201 ~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
..+...+++.+.++ |||.+++... ......++.+.+++.|+.+..+.
T Consensus 109 ~~~~~~~l~~~~~~--~gG~l~~~~~--~~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 109 TKNIEKIIEILDKK--KINHIVANTI--VLENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp CSCHHHHHHHHHHT--TCCEEEEEES--CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccHHHHHHHHhhC--CCCEEEEEec--ccccHHHHHHHHHHcCCeEEEEE
Confidence 78888999999988 9999998763 23455667778889998765543
No 53
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.70 E-value=1.2e-16 Score=142.83 Aligned_cols=101 Identities=23% Similarity=0.337 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++..+| +.+|+|+|+|+.+++.+++++...+. |++++++|+.+++. +++||+|+++
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~----~~~fD~v~~~ 96 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL----NDKYDIAICH 96 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC----SSCEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc----CCCeeEEEEC
Confidence 478999999999999999998887 48999999999999999999888776 89999999998754 3689999998
Q ss_pred C----cccHHHHHHHHccccccCeEEEEEEc
Q 022962 200 A----VAEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 200 ~----~~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
. +.+...+++++.++|||||++++...
T Consensus 97 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 97 AFLLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp SCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ChhhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 5 45778999999999999999997654
No 54
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.70 E-value=9.4e-17 Score=139.42 Aligned_cols=132 Identities=16% Similarity=0.070 Sum_probs=100.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCC-hHHHHHH---HHHHHHcCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESM-NKRCVFL---EHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s-~~~l~~a---~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
++.+|||||||+|.+++.+|+..++.+|+|||+| +.|++.| ++++...++.|++++++|+++++.. +.+.+|.|
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~--~~d~v~~i 101 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE--LKNIADSI 101 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG--GTTCEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh--ccCeEEEE
Confidence 4779999999999999999987889999999999 6666665 7777788888999999999998532 23678888
Q ss_pred EEcCc---------ccHHHHHHHHccccccCeEEEEEEc--CC--------------cHHHHH--HHHHHHHHhCCeEeE
Q 022962 197 VARAV---------AEMRILAEYCLPLVRVGGLFVAAKG--HD--------------PQEEVK--NSERAVQLMGASLLQ 249 (289)
Q Consensus 197 ~sn~~---------~~~~~ll~~~~~~LkpgG~l~~~~g--~~--------------~~~ei~--~~~~~l~~~g~~~~~ 249 (289)
.++.. .+...+++++.++|||||++++... .. ...... ++...+...||.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeee
Confidence 87731 1235789999999999999998221 10 001111 256678899999988
Q ss_pred Eeeee
Q 022962 250 LCSVE 254 (289)
Q Consensus 250 ~~~~~ 254 (289)
+..+.
T Consensus 182 ~~~~~ 186 (225)
T 3p2e_A 182 VKELD 186 (225)
T ss_dssp EEEEC
T ss_pred eeecC
Confidence 87653
No 55
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.70 E-value=1.7e-16 Score=141.63 Aligned_cols=104 Identities=17% Similarity=0.159 Sum_probs=93.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+.++.+|||+|||+|.+++.+|...+..+|+|+|+|+.+++.|++|++.++++|++++++|+.++ .. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~---~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL---KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC---TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc---cCCceEEEE
Confidence 44688999999999999999999877789999999999999999999999998999999999987 32 368999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEc
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+.......++..+.+.|+|||.+++...
T Consensus 193 d~p~~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 193 GYVHKTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp CCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCcccHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9877788899999999999999997643
No 56
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.70 E-value=9.7e-17 Score=139.72 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=100.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++... ..+|+|+|+|+.+++.++++....+..+++++++|+.+++.. +++||+|+++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPE---PDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCC---SSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCC---CCCEEEEEEcc
Confidence 47899999999999999888664 569999999999999999988776545799999999887643 36899999985
Q ss_pred c----cc--HHHHHHHHccccccCeEEEEEEcCC------------cHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 201 V----AE--MRILAEYCLPLVRVGGLFVAAKGHD------------PQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ~----~~--~~~ll~~~~~~LkpgG~l~~~~g~~------------~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+ .+ +..+++++.++|+|||++++..... ......++.+.++++||.++++...
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 3 22 5689999999999999999853210 0002344556677999999888654
No 57
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.69 E-value=3.7e-16 Score=139.34 Aligned_cols=128 Identities=17% Similarity=0.214 Sum_probs=103.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||||||+|.++..++.. +.+|+|+|+|+.+++.|++++...++ .+++++++|+.+++.. .+++||+|+++.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~~~ 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH--LETPVDLILFHA 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG--CSSCEEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh--cCCCceEEEECc
Confidence 679999999999999999876 67999999999999999999998888 5799999999987621 247899999985
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCCcH-------------------------------HHHHHHHHHHHHhCC
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHDPQ-------------------------------EEVKNSERAVQLMGA 245 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~-------------------------------~ei~~~~~~l~~~g~ 245 (289)
+.+...+++++.++|||||.+++....... -...++.+.++.+||
T Consensus 145 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 457789999999999999999986521100 011345667789999
Q ss_pred eEeEEeee
Q 022962 246 SLLQLCSV 253 (289)
Q Consensus 246 ~~~~~~~~ 253 (289)
+++++..+
T Consensus 225 ~v~~~~~~ 232 (285)
T 4htf_A 225 QIMGKTGV 232 (285)
T ss_dssp EEEEEEEE
T ss_pred ceeeeeeE
Confidence 99988765
No 58
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.69 E-value=2.2e-17 Score=140.86 Aligned_cols=129 Identities=9% Similarity=-0.104 Sum_probs=92.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc------------CCCCEEEEeccccccCCCCc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT------------QLLNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~------------~l~ni~~~~~d~~~~~~~~~ 188 (289)
++.+|||+|||+|..+..||.. +.+|+|||+|+.|++.|+++.+.. ...+++++++|+.+++...
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~- 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD- 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH-
T ss_pred CCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc-
Confidence 3789999999999999999987 679999999999999999875431 2347999999999876420
Q ss_pred CCCCceEEEEcCc------ccHHHHHHHHccccccCeEEEEEE-cCC--------cHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 189 FREQYDVAVARAV------AEMRILAEYCLPLVRVGGLFVAAK-GHD--------PQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 189 ~~~~fD~V~sn~~------~~~~~ll~~~~~~LkpgG~l~~~~-g~~--------~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.++||+|+++.. .+...+++++.++|||||++++.. ... ..-...++.+.+.. ||++..+...
T Consensus 99 -~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 99 -IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp -HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred -CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 158999998742 235678999999999999844332 111 00012333444555 8887766654
Q ss_pred e
Q 022962 254 E 254 (289)
Q Consensus 254 ~ 254 (289)
+
T Consensus 177 ~ 177 (203)
T 1pjz_A 177 D 177 (203)
T ss_dssp S
T ss_pred c
Confidence 3
No 59
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.69 E-value=1.1e-15 Score=130.96 Aligned_cols=101 Identities=15% Similarity=0.151 Sum_probs=85.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-----CEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-----NVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-----ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
+.+|||||||+|.++..++...+..+|+|+|+|+.+++.+++++...++. +++++++|+...+.. .++||+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~V 106 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR---FSGYDAA 106 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG---GTTCSEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc---cCCCCEE
Confidence 67999999999999999998777789999999999999999998877764 799999999765532 3789999
Q ss_pred EEcCc----c--cHHHHHHHHccccccCeEEEEEE
Q 022962 197 VARAV----A--EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 197 ~sn~~----~--~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+++.+ . ....+++++.++|||||.++...
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99852 2 34789999999999999777543
No 60
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.69 E-value=3.9e-16 Score=136.90 Aligned_cols=127 Identities=12% Similarity=0.120 Sum_probs=102.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++..+ +.+|+|+|+|+.+++.++++.... .+++++++|+.+++.. +++||+|+++.
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 128 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFP---ENNFDLIYSRD 128 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCC---TTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCC---CCcEEEEeHHH
Confidence 47899999999999999999876 679999999999999999876554 5899999999987543 37899999984
Q ss_pred ----c--ccHHHHHHHHccccccCeEEEEEEc--CC---cHH--------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 201 ----V--AEMRILAEYCLPLVRVGGLFVAAKG--HD---PQE--------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ----~--~~~~~ll~~~~~~LkpgG~l~~~~g--~~---~~~--------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+ .+...+++++.++|||||.+++... .. ... ...++.+.++..||..+++..+
T Consensus 129 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 129 AILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 3 6788999999999999999998641 11 000 1244566778999998887644
No 61
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.69 E-value=2e-16 Score=135.43 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=86.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-----CEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-----NVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-----ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
+.+|||||||+|.++..++...+..+|+|+|+|+.+++.+++++...++. +++++++|+...+.. .++||+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~v 106 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR---FHGYDAA 106 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG---GCSCSEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc---CCCcCEE
Confidence 67999999999999999998777789999999999999999998887775 799999998765432 3689999
Q ss_pred EEcCc----c--cHHHHHHHHccccccCeEEEEEE
Q 022962 197 VARAV----A--EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 197 ~sn~~----~--~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+++.+ . ....+++++.++|||||.+++..
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99852 2 45799999999999999877653
No 62
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=1.2e-16 Score=134.29 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=88.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.+++.++. .+..+|+|+|+|+.+++.|+++++.+++++++++++|+.++.... .+++||+|+++..
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~fD~i~~~~p 122 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAG-TTSPVDLVLADPP 122 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHC-CSSCCSEEEECCC
T ss_pred CCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhc-cCCCccEEEECCC
Confidence 77999999999999998775 456799999999999999999999999888999999998864210 1378999999842
Q ss_pred -----ccHHHHHHHHcc--ccccCeEEEEEEcC
Q 022962 202 -----AEMRILAEYCLP--LVRVGGLFVAAKGH 227 (289)
Q Consensus 202 -----~~~~~ll~~~~~--~LkpgG~l~~~~g~ 227 (289)
..+..+++.+.+ +|+|||.+++....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 457889999988 99999999997753
No 63
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.69 E-value=8.5e-16 Score=134.55 Aligned_cols=127 Identities=21% Similarity=0.167 Sum_probs=104.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHc-CCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLT-QLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~-~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
.++.+|||+|||+|.+++.++.. .|..+|+++|+|+.+++.|+++++.. +.++++++++|+.+.+.. +++||+|+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~---~~~~D~v~ 171 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE---EAAYDGVA 171 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC---TTCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC---CCCcCEEE
Confidence 35789999999999999999987 57889999999999999999999888 777899999999886432 26899999
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEee
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCS 252 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~ 252 (289)
++. .+...+++.+.++|+|||++++.... .+.+.++.+.++..||...+...
T Consensus 172 ~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 172 LDL-MEPWKVLEKAALALKPDRFLVAYLPN--ITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp EES-SCGGGGHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHTTTTEEEEEEEE
T ss_pred ECC-cCHHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCceEEEEE
Confidence 964 44558899999999999999987753 24455666677788988766543
No 64
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.69 E-value=1.6e-16 Score=143.41 Aligned_cols=142 Identities=17% Similarity=0.139 Sum_probs=108.3
Q ss_pred CCCCeEEEEcCCCChHHHHHH-HHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLA-IACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la-~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
.++.+|||||||+|..++.+| ...|+.+|+|+|+|+.+++.|++++...++.+ ++++++|+.+++. +++||+|+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~ 192 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT----REGYDLLT 192 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC----CSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc----cCCeEEEE
Confidence 357899999999999999886 45688999999999999999999999888764 9999999998754 27899999
Q ss_pred EcCc----ccH---HHHHHHHccccccCeEEEEEEcC--------C--------c--------------------HHHHH
Q 022962 198 ARAV----AEM---RILAEYCLPLVRVGGLFVAAKGH--------D--------P--------------------QEEVK 234 (289)
Q Consensus 198 sn~~----~~~---~~ll~~~~~~LkpgG~l~~~~g~--------~--------~--------------------~~ei~ 234 (289)
++.+ .+. ..+++++.++|||||++++..-. . . .....
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 9852 233 34899999999999999976410 0 0 01234
Q ss_pred HHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEe
Q 022962 235 NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLK 269 (289)
Q Consensus 235 ~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k 269 (289)
++.+.++.+||+.+++... ..+....++.+|
T Consensus 273 ~~~~~l~~aGF~~v~~~~~----~~~~~~~v~a~K 303 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDD----RARLFPTVIARK 303 (305)
T ss_dssp HHHHHHHHTTCEEEEEECC----TTSSSCEEEEEC
T ss_pred HHHHHHHHCCCEEEEEEcc----cCceeeEEEEec
Confidence 5566788999998887632 233344555554
No 65
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.69 E-value=2.4e-16 Score=137.74 Aligned_cols=121 Identities=18% Similarity=0.124 Sum_probs=94.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH------cCCCCEEEEeccccc-cCCCCcCCCCc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL------TQLLNVQIVRGRAET-LGKDVSFREQY 193 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~------~~l~ni~~~~~d~~~-~~~~~~~~~~f 193 (289)
++.+|||||||+|.+++.+|..+|+..|+|||+|+.|++.|+++++. .++.|++++++|+.+ ++.. ..+++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~-~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNF-FYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHH-CCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhh-CCCcCe
Confidence 46789999999999999999999999999999999999999998765 456789999999987 4310 013789
Q ss_pred eEEEEcCcccH------------HHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhC
Q 022962 194 DVAVARAVAEM------------RILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG 244 (289)
Q Consensus 194 D~V~sn~~~~~------------~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g 244 (289)
|.|+++...++ ..+++.+.++|||||.|++.... ..-...+.+.+...+
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--LELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHTST
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--HHHHHHHHHHHHHCC
Confidence 99998743322 47999999999999999987643 233344455566665
No 66
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.69 E-value=5.2e-16 Score=134.44 Aligned_cols=127 Identities=13% Similarity=0.070 Sum_probs=100.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||||||+|..+..++. ++.+|+|+|+|+.+++.|++++...+. .+++++++|+.++.. +++||+|+++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP----TELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC----SSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC----CCCeeEEEECh
Confidence 45999999999999988875 578999999999999999998876543 469999999998753 36899999974
Q ss_pred c----c--cHHHHHHHHccccccCeEEEEEEcCC--------cHHHHHHHHHHHHHhCCeEeEEeeee
Q 022962 201 V----A--EMRILAEYCLPLVRVGGLFVAAKGHD--------PQEEVKNSERAVQLMGASLLQLCSVE 254 (289)
Q Consensus 201 ~----~--~~~~ll~~~~~~LkpgG~l~~~~g~~--------~~~ei~~~~~~l~~~g~~~~~~~~~~ 254 (289)
+ . +...+++++.++|+|||.+++..-.. ......++.+.++..||+++++....
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 2 3 67899999999999999999754211 11112344556778999999887664
No 67
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.69 E-value=3.6e-16 Score=137.14 Aligned_cols=124 Identities=17% Similarity=0.129 Sum_probs=103.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.++.. .|+.+|+++|+|+.+++.|+++++..++.+ ++++++|+.+... +++||+|++
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~v~~ 168 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE----EENVDHVIL 168 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC----CCSEEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC----CCCcCEEEE
Confidence 4789999999999999999988 778999999999999999999999999876 9999999987532 367999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhC--CeEeEEe
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMG--ASLLQLC 251 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g--~~~~~~~ 251 (289)
+. .+...+++.+.++|+|||.+++.... .+...++.+.+++.| |...++.
T Consensus 169 ~~-~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 169 DL-PQPERVVEHAAKALKPGGFFVAYTPC--SNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp CS-SCGGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred CC-CCHHHHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHHcCCCccccEEE
Confidence 75 34567899999999999999987643 344455666778888 8766554
No 68
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.69 E-value=2.7e-16 Score=137.28 Aligned_cols=127 Identities=14% Similarity=0.112 Sum_probs=100.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++... ..+|+|+|+|+.+++.++++.... .+++++++|+.+++.. +++||+|+++.
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 166 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLP---PNTYDLIVIQW 166 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCC---SSCEEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCC---CCCeEEEEEcc
Confidence 37899999999999999988765 568999999999999999977654 4799999999987643 36899999985
Q ss_pred c------ccHHHHHHHHccccccCeEEEEEEcCCc-------------HHHHHHHHHHHHHhCCeEeEEeee
Q 022962 201 V------AEMRILAEYCLPLVRVGGLFVAAKGHDP-------------QEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------------~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+ .+...+++++.++|||||++++...... .....++.+.++.+||.++++...
T Consensus 167 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 167 TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 3 4578999999999999999998653100 001234555677999998887643
No 69
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.69 E-value=2.1e-16 Score=136.82 Aligned_cols=123 Identities=14% Similarity=0.087 Sum_probs=98.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||||||+|.++..++... .+|+|+|+|+.+++.|+++... +++++++|++++.. +++||+|+++.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~----~~~fD~v~~~~~ 112 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQL----PRRYDNIVLTHV 112 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCC----SSCEEEEEEESC
T ss_pred CCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCc----CCcccEEEEhhH
Confidence 6789999999999999988764 4899999999999999886433 79999999988732 37899999985
Q ss_pred ---cccHHHHHHHHc-cccccCeEEEEEEcCCc-H-----------------------------HHHHHHHHHHHHhCCe
Q 022962 201 ---VAEMRILAEYCL-PLVRVGGLFVAAKGHDP-Q-----------------------------EEVKNSERAVQLMGAS 246 (289)
Q Consensus 201 ---~~~~~~ll~~~~-~~LkpgG~l~~~~g~~~-~-----------------------------~ei~~~~~~l~~~g~~ 246 (289)
+.+...+++++. ++|||||++++...... . -...++.+.++.+||+
T Consensus 113 l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 192 (250)
T 2p7i_A 113 LEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQ 192 (250)
T ss_dssp GGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCE
T ss_pred HHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCe
Confidence 357889999999 99999999998763211 0 0123556678899999
Q ss_pred EeEEeeee
Q 022962 247 LLQLCSVE 254 (289)
Q Consensus 247 ~~~~~~~~ 254 (289)
++++..+.
T Consensus 193 ~~~~~~~~ 200 (250)
T 2p7i_A 193 VTYRSGIF 200 (250)
T ss_dssp EEEEEEEE
T ss_pred EEEEeeeE
Confidence 99887554
No 70
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.69 E-value=2.3e-16 Score=138.07 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|..+..++...+ .+|+|+|+|+.+++.++++.. ..+++++++|+.+++.. +++||+|+++.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 116 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIE---PDAYNVVLSSL 116 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCC---TTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCC---CCCeEEEEEch
Confidence 378999999999999999987643 399999999999999988655 34799999999987643 37899999985
Q ss_pred ----cccHHHHHHHHccccccCeEEEEE
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+.+...+++++.++|||||.+++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 117 ALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 457899999999999999999985
No 71
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.69 E-value=3.7e-16 Score=140.07 Aligned_cols=129 Identities=14% Similarity=0.112 Sum_probs=104.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|..+..++..+ +.+|+|+|+|+.+++.++++++..++. +++++++|+.+++.. +++||+|+++
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~~ 157 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCE---DNSYDFIWSQ 157 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSC---TTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCC---CCCEeEEEec
Confidence 47899999999999999999875 469999999999999999999888874 699999999987643 3789999997
Q ss_pred C----cccHHHHHHHHccccccCeEEEEEEcC----Cc---HH------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 200 A----VAEMRILAEYCLPLVRVGGLFVAAKGH----DP---QE------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~----~~~~~~ll~~~~~~LkpgG~l~~~~g~----~~---~~------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
. +.+...+++++.++|||||++++.... .. .. ....+.+.++.+||.++++..+
T Consensus 158 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 158 DAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 4 346789999999999999999986421 00 01 1234556778999998887654
No 72
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.68 E-value=7e-16 Score=128.50 Aligned_cols=115 Identities=16% Similarity=0.205 Sum_probs=94.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC--EEEEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN--VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n--i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.+++++...++++ ++++++|+.+... +++||+|++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~ 125 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----DRKYNKIIT 125 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT----TSCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc----cCCceEEEE
Confidence 4779999999999999998876 7899999999999999999999999887 9999999987432 368999999
Q ss_pred cCc-----ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHh
Q 022962 199 RAV-----AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLM 243 (289)
Q Consensus 199 n~~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~ 243 (289)
+.. .....+++.+.++|+|||.+++....... ..++.+.+++.
T Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~l~~~ 173 (194)
T 1dus_A 126 NPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG--AKSLAKYMKDV 173 (194)
T ss_dssp CCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH--HHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC--hHHHHHHHHHH
Confidence 853 45679999999999999999987754432 22334444455
No 73
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=1.2e-15 Score=130.71 Aligned_cols=98 Identities=15% Similarity=0.148 Sum_probs=85.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.++..++...+ +|+|+|+|+.+++.++++.+..+ .+++++++|+.+++.. +++||+|+++..
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~---~~~~D~v~~~~~ 112 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFE---DKTFDYVIFIDS 112 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSC---TTCEEEEEEESC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCC---CCcEEEEEEcCc
Confidence 67999999999999999987754 99999999999999999998877 5799999999886532 368999999854
Q ss_pred ------ccHHHHHHHHccccccCeEEEEEE
Q 022962 202 ------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 202 ------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.+...+++.+.++|+|||.+++..
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 113 IVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp GGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 356789999999999999998764
No 74
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.68 E-value=7.9e-16 Score=130.00 Aligned_cols=131 Identities=12% Similarity=0.133 Sum_probs=101.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++ +|||||||+|..+..++.. +.+|+|+|+|+.+++.++++....+. +++++++|+.+++.. +++||+|+++.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~---~~~fD~v~~~~ 102 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIV---ADAWEGIVSIF 102 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCC---TTTCSEEEEEC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCC---cCCccEEEEEh
Confidence 36 9999999999999988865 57999999999999999999988877 799999999887543 36899999873
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCCc--------------HHHHHHHHHHHHHhCCeEeEEeeeecCCCCC
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHDP--------------QEEVKNSERAVQLMGASLLQLCSVESQSPFG 260 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~--------------~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~ 260 (289)
..+...+++.+.++|+|||.+++...... .-...++.+.++ ||+++++.....+...+
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~~~~~g 178 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLERNLDEG 178 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEEEECSCS
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEEeecCCC
Confidence 24678999999999999999998742110 011233444454 99999887776544333
No 75
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.68 E-value=1.7e-15 Score=133.11 Aligned_cols=104 Identities=17% Similarity=0.228 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||||||+|..++.+|...| +.+|+++|+|+.+++.|+++++..++. +|+++++|+.+........++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 478999999999999999998887 799999999999999999999999986 799999999874221111248999998
Q ss_pred cC-cccHHHHHHHHccccccCeEEEEE
Q 022962 199 RA-VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 199 n~-~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.+ ......+++.+.++|||||++++.
T Consensus 143 d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 143 DADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 85 446788999999999999999874
No 76
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.68 E-value=9e-16 Score=127.59 Aligned_cols=121 Identities=21% Similarity=0.170 Sum_probs=100.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.++... .+|+++|+|+.+++.++++++.+++ .+++++++|+.+.... .++||+|+++
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~~ 107 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK---IPDIDIAVVG 107 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT---SCCEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc---CCCCCEEEEC
Confidence 47899999999999999998764 7999999999999999999999988 6899999998872111 1479999998
Q ss_pred Cc-ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEe
Q 022962 200 AV-AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248 (289)
Q Consensus 200 ~~-~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~ 248 (289)
.. ..+..+++.+.++|+|||.+++... ..+....+.+.+++.||.+.
T Consensus 108 ~~~~~~~~~l~~~~~~l~~gG~l~~~~~--~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 108 GSGGELQEILRIIKDKLKPGGRIIVTAI--LLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp CCTTCHHHHHHHHHHTEEEEEEEEEEEC--BHHHHHHHHHHHHHTTCCCE
T ss_pred CchHHHHHHHHHHHHhcCCCcEEEEEec--CcchHHHHHHHHHHCCCceE
Confidence 65 6789999999999999999998653 23455566677888998443
No 77
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.68 E-value=6.2e-16 Score=140.17 Aligned_cols=148 Identities=12% Similarity=0.105 Sum_probs=112.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH----cCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL----TQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~----~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++..+..+|++||+|+.+++.|+++... ....+++++++|+.++... ..+++||+|+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~fDvIi 174 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ-TPDNTYDVVI 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS-SCTTCEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh-ccCCceeEEE
Confidence 6799999999999999998766678999999999999999997643 2234799999999876431 0137899999
Q ss_pred EcCcccH--------HHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCC-CCceEEEE
Q 022962 198 ARAVAEM--------RILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSP-FGQRTAVV 266 (289)
Q Consensus 198 sn~~~~~--------~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~-~~~r~lv~ 266 (289)
++..... ..+++.+.++|+|||.+++..+. ........+.+.++..||..++......|.. .+.+..++
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~ 254 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLV 254 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEE
Confidence 9853321 68999999999999999987653 2345567777888899998777664444443 45666777
Q ss_pred EEec
Q 022962 267 CLKS 270 (289)
Q Consensus 267 ~~k~ 270 (289)
+.+.
T Consensus 255 as~~ 258 (304)
T 3bwc_A 255 CSKK 258 (304)
T ss_dssp EESS
T ss_pred EeCC
Confidence 6664
No 78
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.68 E-value=9.4e-17 Score=137.59 Aligned_cols=130 Identities=18% Similarity=0.102 Sum_probs=97.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHH----HHHcCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHA----VSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~----~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
++.+|||||||+|.++..++..+|+.+|+|+|+|+.|++.+.+. +...+++|++++++|+++++... +. |.|
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~---~~-d~v 102 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS---GV-GEL 102 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC---CE-EEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC---CC-CEE
Confidence 47799999999999999999999999999999999988864333 33456778999999999976532 33 655
Q ss_pred EEc---C------cccHHHHHHHHccccccCeEEEEEEcCC---------------cHHHH-HHHHHHHHHhCCeEeEEe
Q 022962 197 VAR---A------VAEMRILAEYCLPLVRVGGLFVAAKGHD---------------PQEEV-KNSERAVQLMGASLLQLC 251 (289)
Q Consensus 197 ~sn---~------~~~~~~ll~~~~~~LkpgG~l~~~~g~~---------------~~~ei-~~~~~~l~~~g~~~~~~~ 251 (289)
+.. . +.+...+++++.++|||||.+++..+.. ....+ ..+...+..+||.+.++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 532 1 1233789999999999999999864311 11222 235667889999999887
Q ss_pred eee
Q 022962 252 SVE 254 (289)
Q Consensus 252 ~~~ 254 (289)
.+.
T Consensus 183 ~~~ 185 (218)
T 3mq2_A 183 YLE 185 (218)
T ss_dssp EEC
T ss_pred ccc
Confidence 663
No 79
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.68 E-value=6.2e-16 Score=132.25 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=102.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.++++.. .+++++++|+.+++.. ++||+|+++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~----~~fD~v~~~~ 114 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP----TSIDTIVSTY 114 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC----SCCSEEEEES
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC----CCeEEEEECc
Confidence 3779999999999999999876 6799999999999999988654 4789999999987542 7899999985
Q ss_pred c----ccHHH--HHHHHccccccCeEEEEEEcC-CcHH---------------------------HHHHHHHHHHHhCCe
Q 022962 201 V----AEMRI--LAEYCLPLVRVGGLFVAAKGH-DPQE---------------------------EVKNSERAVQLMGAS 246 (289)
Q Consensus 201 ~----~~~~~--ll~~~~~~LkpgG~l~~~~g~-~~~~---------------------------ei~~~~~~l~~~g~~ 246 (289)
+ .+... +++++.++|||||.+++.... .... ...++.+.++++||+
T Consensus 115 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 115 AFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred chhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 2 33434 999999999999999987421 1100 124456778899998
Q ss_pred EeEEeeeecCCCCCceEEEEEEecCCCC
Q 022962 247 LLQLCSVESQSPFGQRTAVVCLKSRRTP 274 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~r~lv~~~k~~~~p 274 (289)
+..+.. . ....++..+..++|
T Consensus 195 v~~~~~------~-~~~w~~~~~~~~~~ 215 (220)
T 3hnr_A 195 VTFTRL------N-HFVWVMEATKQLEH 215 (220)
T ss_dssp EEEEEC------S-SSEEEEEEEECSCC
T ss_pred EEEeec------c-ceEEEEeehhhhhh
Confidence 776641 1 34455555554554
No 80
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.67 E-value=5e-16 Score=136.79 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||||||+|.++..++.. +.+|+|+|+|+.+++.|+++.. +++++++|+.+++. +++||+|+++.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~----~~~fD~v~~~~~ 119 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL----GRRFSAVTCMFS 119 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC----SCCEEEEEECTT
T ss_pred CCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc----cCCcCEEEEcCc
Confidence 679999999999999998866 4699999999999999988632 78999999998754 37899999974
Q ss_pred ----c---ccHHHHHHHHccccccCeEEEEE
Q 022962 201 ----V---AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ----~---~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+ .+...+++++.++|||||.+++.
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 25668899999999999999984
No 81
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=5.9e-17 Score=141.49 Aligned_cols=128 Identities=12% Similarity=0.075 Sum_probs=96.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+|.+|||||||+|..+..++...| .+|++||+|+.+++.|+++++..+. +++++.+|++++... ..+++||.|+...
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~-~~~~~FD~i~~D~ 136 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPT-LPDGHFDGILYDT 136 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGG-SCTTCEEEEEECC
T ss_pred CCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhccc-ccccCCceEEEee
Confidence 488999999999999988886654 5899999999999999999887765 699999999876432 1247899998753
Q ss_pred ---------cccHHHHHHHHccccccCeEEEEEEc----------CCcHHH--HHHHHHHHHHhCCeEeEEe
Q 022962 201 ---------VAEMRILAEYCLPLVRVGGLFVAAKG----------HDPQEE--VKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 201 ---------~~~~~~ll~~~~~~LkpgG~l~~~~g----------~~~~~e--i~~~~~~l~~~g~~~~~~~ 251 (289)
..+...+++++.++|||||+|++... ...... .+.....|.++||+...+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i~ 208 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIR 208 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGGEE
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEEEE
Confidence 23578899999999999999987531 011111 1233456778999765543
No 82
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.67 E-value=3.5e-16 Score=135.44 Aligned_cols=101 Identities=16% Similarity=0.265 Sum_probs=87.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC--CEEEEeccccccCCCCcCCCCceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL--NVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~--ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+.+|||||||+|..++.+|...+ +++|+++|+|+++++.|+++++..++. +++++++|+.++.... .+++||+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~-~~~~fD~V~~ 135 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL-ANDSYQLVFG 135 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS-CTTCEEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh-cCCCcCeEEE
Confidence 45999999999999999998764 789999999999999999999999986 6999999998753211 1478999999
Q ss_pred cCc-ccHHHHHHHHccccccCeEEEE
Q 022962 199 RAV-AEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 199 n~~-~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
.+. ..+..+++.+.++|||||.+++
T Consensus 136 d~~~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 136 QVSPMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp CCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred cCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence 864 4678899999999999999986
No 83
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.67 E-value=1.3e-15 Score=137.46 Aligned_cols=146 Identities=17% Similarity=0.171 Sum_probs=106.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc-----CCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT-----QLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~-----~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
+.+|||||||+|.++..+++..+..+|++||+|+.+++.|+++.... .-.+++++++|+.++... .+++||+|
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fDvI 161 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTFDVI 161 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CCCCEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cCCCccEE
Confidence 67999999999999999997667789999999999999999987764 234799999999875332 24789999
Q ss_pred EEcCccc--------HHHHHHHHccccccCeEEEEEEc--CCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCC-CceEEE
Q 022962 197 VARAVAE--------MRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKNSERAVQLMGASLLQLCSVESQSPF-GQRTAV 265 (289)
Q Consensus 197 ~sn~~~~--------~~~ll~~~~~~LkpgG~l~~~~g--~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~-~~r~lv 265 (289)
+++.... ...+++.+.++|+|||.+++..+ ....+.+..+.+.++.. |..+.......|... +.+..+
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~~f~ 240 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEEEEEEEECTTSSSSEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH-CCCeEEEEEEecccCCCceEEE
Confidence 9985331 17899999999999999998654 23345667777777776 544554444445433 445555
Q ss_pred EEEec
Q 022962 266 VCLKS 270 (289)
Q Consensus 266 ~~~k~ 270 (289)
+..+.
T Consensus 241 ~as~~ 245 (294)
T 3adn_A 241 WATDN 245 (294)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 55543
No 84
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=1.2e-15 Score=132.14 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||+|||+|.++..++.. .+|+|+|+|+.+++.|+++....+ .+++++++|+.+++. +++||+|+++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~----~~~fD~v~~~~~ 105 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL----PEPVDAITILCD 105 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC----SSCEEEEEECTT
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC----CCCcCEEEEeCC
Confidence 679999999999999888765 799999999999999999988877 479999999988754 36899999863
Q ss_pred ----c---ccHHHHHHHHccccccCeEEEE
Q 022962 201 ----V---AEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 201 ----~---~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
+ .+...+++++.++|+|||.+++
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 106 SLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 2 3567899999999999999987
No 85
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.67 E-value=8e-16 Score=143.59 Aligned_cols=132 Identities=17% Similarity=0.173 Sum_probs=102.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHc-----C-C--CCEEEEeccccccCCC---Cc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLT-----Q-L--LNVQIVRGRAETLGKD---VS 188 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~-----~-l--~ni~~~~~d~~~~~~~---~~ 188 (289)
++.+|||||||+|.+++.++... ++.+|+|+|+|+.+++.|+++++.+ | . .+++++++|++++... ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 47899999999999999999875 7889999999999999999988765 3 2 5899999999986210 11
Q ss_pred CCCCceEEEEcC----cccHHHHHHHHccccccCeEEEEEEcC-C-c-H-----------------HHHHHHHHHHHHhC
Q 022962 189 FREQYDVAVARA----VAEMRILAEYCLPLVRVGGLFVAAKGH-D-P-Q-----------------EEVKNSERAVQLMG 244 (289)
Q Consensus 189 ~~~~fD~V~sn~----~~~~~~ll~~~~~~LkpgG~l~~~~g~-~-~-~-----------------~ei~~~~~~l~~~g 244 (289)
.+++||+|+++. +.++..+++++.++|||||+|++.... . . . -...++.+.+++.|
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 247899999985 357899999999999999999986411 1 0 0 01144566778999
Q ss_pred CeEeEEee
Q 022962 245 ASLLQLCS 252 (289)
Q Consensus 245 ~~~~~~~~ 252 (289)
|..+++..
T Consensus 243 F~~v~~~~ 250 (383)
T 4fsd_A 243 FRDVRLVS 250 (383)
T ss_dssp CCCEEEEE
T ss_pred CceEEEEe
Confidence 98776543
No 86
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.67 E-value=3.6e-16 Score=135.94 Aligned_cols=101 Identities=21% Similarity=0.309 Sum_probs=89.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCC-CCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGK-DVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~-~~~~~~~fD~V~s 198 (289)
++.+|||||||+|..++.+|...|+.+|+++|+|+++++.|+++++..++. +++++++|+.+... . .+++||+|++
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~~fD~V~~ 148 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV--NDKVYDMIFI 148 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH--TTSCEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh--ccCCccEEEE
Confidence 477999999999999999998778899999999999999999999999985 79999999987532 1 1378999999
Q ss_pred cC-cccHHHHHHHHccccccCeEEEE
Q 022962 199 RA-VAEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 199 n~-~~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
++ ...+..+++.+.++|+|||++++
T Consensus 149 ~~~~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 149 DAAKAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ETTSSSHHHHHHHHGGGEEEEEEEEE
T ss_pred cCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 86 56788999999999999999987
No 87
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.66 E-value=8.7e-16 Score=133.11 Aligned_cols=126 Identities=15% Similarity=0.110 Sum_probs=100.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++. ...+++++++|+.+++.. +++||+|+++.
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 124 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFE---NEQFEAIMAIN 124 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSC---TTCEEEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCC---CCCccEEEEcC
Confidence 4789999999999999999876 679999999999999998864 334799999999987643 37899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCC-cH------------------HHHHHHHHHHHHhCCeEeEEeeee
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHD-PQ------------------EEVKNSERAVQLMGASLLQLCSVE 254 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~-~~------------------~ei~~~~~~l~~~g~~~~~~~~~~ 254 (289)
+.+...+++++.++|+|||.+++..... .. -...++.+.++.+||++++...+.
T Consensus 125 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 125 SLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp CTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeeccc
Confidence 4578899999999999999999865211 00 011345567779999999887664
No 88
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.66 E-value=2.7e-15 Score=129.37 Aligned_cols=144 Identities=15% Similarity=0.096 Sum_probs=100.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.++... +..+|+|+|+|+.+++.++++++.. .|++++++|+.+........++||+|+++
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 47899999999999999999774 5689999999999999999988765 58999999998743111123689999998
Q ss_pred Cccc--HHHHHHHHccccccCeEEEEEEcCC------cHHHHH-HHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEe
Q 022962 200 AVAE--MRILAEYCLPLVRVGGLFVAAKGHD------PQEEVK-NSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLK 269 (289)
Q Consensus 200 ~~~~--~~~ll~~~~~~LkpgG~l~~~~g~~------~~~ei~-~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k 269 (289)
.... ...+++.+.++|||||++++..... ....+. +....+... |++++...+ ......+..++.+|
T Consensus 151 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-f~~~~~~~~--~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 151 VAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY-FEVIERLNL--EPYEKDHALFVVRK 226 (227)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC--TTTSSSEEEEEEEC
T ss_pred CCCHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh-ceeeeEecc--CcccCCCEEEEEEe
Confidence 6432 2355999999999999999864211 111221 222233455 887776544 11123344555543
No 89
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.66 E-value=5.8e-16 Score=131.80 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=87.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCEEEEeccccccCCCCcCCCC-ceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL--LNVQIVRGRAETLGKDVSFREQ-YDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l--~ni~~~~~d~~~~~~~~~~~~~-fD~V~s 198 (289)
+.+|||+|||+|.+++.++.. ...+|+|+|+|+.+++.|+++++.+++ ++++++++|+.++.... .+++ ||+|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP-QNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-CSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh-ccCCCCCEEEE
Confidence 679999999999999986654 346999999999999999999999998 68999999998864320 1368 999999
Q ss_pred cCc---ccHHHHHHHH--ccccccCeEEEEEEcCC
Q 022962 199 RAV---AEMRILAEYC--LPLVRVGGLFVAAKGHD 228 (289)
Q Consensus 199 n~~---~~~~~ll~~~--~~~LkpgG~l~~~~g~~ 228 (289)
+.. .....+++.+ .++|+|||.+++.....
T Consensus 132 ~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 854 4567888888 78899999999877543
No 90
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.66 E-value=1.4e-15 Score=133.16 Aligned_cols=122 Identities=15% Similarity=0.120 Sum_probs=94.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--------CCCCEEEEeccccc-cCCCCcCCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--------QLLNVQIVRGRAET-LGKDVSFRE 191 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--------~l~ni~~~~~d~~~-~~~~~~~~~ 191 (289)
++.+|||||||+|.+++.+|...|..+|+|||+|+.+++.++++++.+ ++.|++++++|+.+ ++.. ...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~-~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF-FEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT-SCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh-cccc
Confidence 477999999999999999999988889999999999999999998877 77899999999987 3311 1136
Q ss_pred CceEEEEcCcccH------------HHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCC
Q 022962 192 QYDVAVARAVAEM------------RILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 245 (289)
Q Consensus 192 ~fD~V~sn~~~~~------------~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~ 245 (289)
++|.|+.+....+ ..+++.+.++|+|||.|++.... ..-...+.+.+...+.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV--KDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHHSTT
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc--HHHHHHHHHHHHhCcC
Confidence 8999987632222 58999999999999999986643 2222233345556653
No 91
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.66 E-value=1e-15 Score=134.12 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.+++++ ..+..+++++++|+++++.. +++||+|+++.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 112 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLP---DESVHGVIVVH 112 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSC---TTCEEEEEEES
T ss_pred CCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCC---CCCeeEEEECC
Confidence 4789999999999999999865 679999999999999999987 33456899999999887643 37899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEE
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+.+...+++++.++|+|||.+++..
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHCCCCcEEEEEe
Confidence 3467899999999999999999863
No 92
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.66 E-value=3.9e-17 Score=156.86 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHhhcCcCceeec----------ChHHHHHhhhhhccccCCCCcccccc--cc--CCCCCCCCeEEEEc
Q 022962 64 QEQIHLYVDALLQWNRKMNLTAVK----------DVNEVMERHIDDSLAIIPPIKNSYTS--HC--DSSCNSNLKLVDVG 129 (289)
Q Consensus 64 ~~~l~~~~~~l~~~n~~~~l~~~~----------~~~~~~~~~~~~sl~~~~~~~~~~~~--~~--~~~~~~~~~VLDiG 129 (289)
...+..|.+.+.++.++.++.++. +..++|...+.+ ...+.+.+.++.. .. .....++.+|||||
T Consensus 88 ~~~~~~~~~ll~~~~~~~pl~~i~~~r~~~~~~~~~~~~y~~~~~~-~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiG 166 (480)
T 3b3j_A 88 PHDFCSFYNILKTCRGHTLERSVFSERTEESSAVQYFQFYGYLSQQ-QNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVG 166 (480)
T ss_dssp --------------------------------CCEEEEGGGCSCHH-HHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEES
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHhhhhhhhchhhHHHHHhhhccc-hhhhcChHhHHHHHHHHHHhhhhcCCCEEEEec
Confidence 344566667777777888888887 333444433221 1111111111100 00 00122478999999
Q ss_pred CCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEcCc------c
Q 022962 130 TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVARAV------A 202 (289)
Q Consensus 130 cG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~------~ 202 (289)
||+|.+++.+|+ .+..+|+|+|+|+ +++.|+++++.+++ ++|+++++|+++++. +++||+|+|+.+ .
T Consensus 167 cGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~----~~~fD~Ivs~~~~~~~~~e 240 (480)
T 3b3j_A 167 CGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNE 240 (480)
T ss_dssp CSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC----SSCEEEEECCCCHHHHTCH
T ss_pred CcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc----CCCeEEEEEeCchHhcCcH
Confidence 999999999886 5678999999998 99999999999998 579999999998643 268999999864 3
Q ss_pred cHHHHHHHHccccccCeEEEEEE
Q 022962 203 EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 203 ~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.....+..+.++|||||.+++..
T Consensus 241 ~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 241 RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHHHHHGGGGEEEEEEEESCE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEe
Confidence 45667778899999999998543
No 93
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=9.4e-16 Score=136.41 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=97.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++. ++.+|+|+|+|+.+++.++++. .+++++++|+++++. +++||+|+++.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----~~~fD~v~~~~ 125 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV----DKPLDAVFSNA 125 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC----SSCEEEEEEES
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc----CCCcCEEEEcc
Confidence 478999999999999999987 6789999999999999998754 478899999998754 37899999985
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCC-cHHH---------------------------HHHHHHHHHHhCCeEe
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHD-PQEE---------------------------VKNSERAVQLMGASLL 248 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~-~~~e---------------------------i~~~~~~l~~~g~~~~ 248 (289)
+.+...+++++.++|||||++++..... .... ..++.+.++.+||.++
T Consensus 126 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 205 (279)
T 3ccf_A 126 MLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVT 205 (279)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEE
T ss_pred hhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEE
Confidence 3578899999999999999999865321 1111 1234556778899887
Q ss_pred EEeeee
Q 022962 249 QLCSVE 254 (289)
Q Consensus 249 ~~~~~~ 254 (289)
++..+.
T Consensus 206 ~~~~~~ 211 (279)
T 3ccf_A 206 YAALFN 211 (279)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 766554
No 94
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.65 E-value=1.5e-15 Score=135.50 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=101.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++..++ .+|+|+|+|+.+++.+++++...++. +++++++|+.+++ ++||+|+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~fD~v~~~ 136 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------EPVDRIVSI 136 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------CCCSEEEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC------CCeeEEEEe
Confidence 478999999999999999996654 59999999999999999999988874 7999999998763 679999998
Q ss_pred C----c--ccHHHHHHHHccccccCeEEEEEEcC--CcHH------------------------------HHHHHHHHHH
Q 022962 200 A----V--AEMRILAEYCLPLVRVGGLFVAAKGH--DPQE------------------------------EVKNSERAVQ 241 (289)
Q Consensus 200 ~----~--~~~~~ll~~~~~~LkpgG~l~~~~g~--~~~~------------------------------ei~~~~~~l~ 241 (289)
. + .++..+++++.++|||||.+++.... .... ...++.+.++
T Consensus 137 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 216 (287)
T 1kpg_A 137 GAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECAS 216 (287)
T ss_dssp SCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHH
T ss_pred CchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHH
Confidence 4 3 46789999999999999999975421 1000 1344556677
Q ss_pred HhCCeEeEEeee
Q 022962 242 LMGASLLQLCSV 253 (289)
Q Consensus 242 ~~g~~~~~~~~~ 253 (289)
++||.++++..+
T Consensus 217 ~aGf~~~~~~~~ 228 (287)
T 1kpg_A 217 ANGFTVTRVQSL 228 (287)
T ss_dssp TTTCEEEEEEEC
T ss_pred hCCcEEEEEEeC
Confidence 899998887643
No 95
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.65 E-value=1.8e-15 Score=134.70 Aligned_cols=124 Identities=18% Similarity=0.168 Sum_probs=102.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.++.. .|..+|+++|+|+.+++.|+++++.+++ ++++++++|+.+... +++||+|++
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~V~~ 187 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD----EKDVDALFL 187 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS----CCSEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc----CCccCEEEE
Confidence 4789999999999999999988 5789999999999999999999999887 579999999987621 267999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
+. .+...+++.+.++|+|||.+++..+. .+.+.++.+.++..||...++.
T Consensus 188 ~~-~~~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 188 DV-PDPWNYIDKCWEALKGGGRFATVCPT--TNQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp CC-SCGGGTHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHSSEEEEEEE
T ss_pred CC-cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCceeEEE
Confidence 75 34557889999999999999998753 2334455566778899866654
No 96
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=5.8e-16 Score=128.27 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=86.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.++.. +..+|+|+|+|+.+++.|+++++..++. +++++++|+.+... ..+++||+|+++
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~fD~i~~~ 107 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID--CLTGRFDLVFLD 107 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH--HBCSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH--hhcCCCCEEEEC
Confidence 3779999999999999998876 6679999999999999999999999885 69999999987421 123579999998
Q ss_pred Cc---ccHHHHHHHHc--cccccCeEEEEEEcC
Q 022962 200 AV---AEMRILAEYCL--PLVRVGGLFVAAKGH 227 (289)
Q Consensus 200 ~~---~~~~~ll~~~~--~~LkpgG~l~~~~g~ 227 (289)
.. .....+++.+. ++|+|||.+++....
T Consensus 108 ~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 108 PPYAKETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCcchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 53 34566777776 999999999987754
No 97
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.65 E-value=6.9e-16 Score=133.33 Aligned_cols=119 Identities=10% Similarity=0.074 Sum_probs=94.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccc-ccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE-TLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~-~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++ ..+++++++|+. .++.. .+++||+|+++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~--~~~~fD~v~~~ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAG--LGAPFGLIVSR 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTT--CCCCEEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCc--CCCCEEEEEeC
Confidence 4789999999999999999876 67999999999999999887 347999999995 44432 13789999998
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.+...+++++.++|||||.++...+....+++ ...+...||....+...
T Consensus 119 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 119 --RGPTSVILRLPELAAPDAHFLYVGPRLNVPEV---PERLAAVGWDIVAEDHV 167 (226)
T ss_dssp --SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHH---HHHHHHTTCEEEEEEEE
T ss_pred --CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHH---HHHHHHCCCeEEEEEee
Confidence 46678889999999999999854444444444 44566899988776543
No 98
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.65 E-value=2.1e-15 Score=123.90 Aligned_cols=133 Identities=9% Similarity=-0.008 Sum_probs=96.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.++..++... .+|+|+|+|+.+++.++++ ..+++++++| .+.. +++||+|+++.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~---~~~~D~v~~~~ 83 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIP---DNSVDFILFAN 83 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSC---TTCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCC---CCceEEEEEcc
Confidence 47799999999999999998764 3999999999999999887 4479999998 2221 36899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCCc--------H--HHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEE
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHDP--------Q--EEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVV 266 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~--------~--~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~ 266 (289)
+.+...+++++.++|+|||++++..-... . -...++.+.++ ||++++.... ......++
T Consensus 84 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~-----~~~~~~l~ 156 (170)
T 3i9f_A 84 SFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP-----TPYHFGLV 156 (170)
T ss_dssp CSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS-----STTEEEEE
T ss_pred chhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC-----CCceEEEE
Confidence 45788999999999999999998642110 0 01123344454 9988877532 23445566
Q ss_pred EEecCCC
Q 022962 267 CLKSRRT 273 (289)
Q Consensus 267 ~~k~~~~ 273 (289)
+.+..+.
T Consensus 157 ~~~~~~~ 163 (170)
T 3i9f_A 157 LKRKTSE 163 (170)
T ss_dssp EEECCCC
T ss_pred EecCCCC
Confidence 6655333
No 99
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.65 E-value=3.5e-15 Score=128.45 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=82.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCc---CCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVS---FREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~---~~~~fD~V 196 (289)
+.+|||||||+|..++.+|...+ +.+|+++|+|+.+++.|+++++.+++. +++++++|+.+...... ..++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 67999999999999999998654 789999999999999999999999986 59999999876422100 01589999
Q ss_pred EEcCc-cc---HHHHHHHHccccccCeEEEEE
Q 022962 197 VARAV-AE---MRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~-~~---~~~ll~~~~~~LkpgG~l~~~ 224 (289)
++++. .. ...+++.+ ++|+|||.+++.
T Consensus 139 ~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred EEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence 99863 22 33567777 999999999864
No 100
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.65 E-value=1.8e-15 Score=126.91 Aligned_cols=99 Identities=21% Similarity=0.217 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++++..++++++++++|+.+++. +++||+|+++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~~~ 105 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF----DRQYDFILSTV 105 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC----CCCEEEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC----CCCceEEEEcc
Confidence 3679999999999999999876 67999999999999999999998888789999999988754 37899999984
Q ss_pred c------ccHHHHHHHHccccccCeEEEEEE
Q 022962 201 V------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ .+...+++.+.++|+|||.+++..
T Consensus 106 ~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 106 VLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 2 267899999999999999988754
No 101
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.65 E-value=9.7e-16 Score=135.33 Aligned_cols=126 Identities=17% Similarity=0.100 Sum_probs=92.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH-----------------cCCCCEEEEecccccc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL-----------------TQLLNVQIVRGRAETL 183 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~-----------------~~l~ni~~~~~d~~~~ 183 (289)
++.+|||+|||+|..+..||.. +.+|+|||+|+.|++.|++.... ....+|+++++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 3679999999999999999976 67999999999999999765431 0124799999999988
Q ss_pred CCCCcCCCCceEEEEcCc------ccHHHHHHHHccccccCeEEEEEE---------cC---CcHHHHHHHHHHHHHhCC
Q 022962 184 GKDVSFREQYDVAVARAV------AEMRILAEYCLPLVRVGGLFVAAK---------GH---DPQEEVKNSERAVQLMGA 245 (289)
Q Consensus 184 ~~~~~~~~~fD~V~sn~~------~~~~~ll~~~~~~LkpgG~l~~~~---------g~---~~~~ei~~~~~~l~~~g~ 245 (289)
+... .++||+|+++.. .....+++++.++|||||+|++.. ++ ...+++ .+.+.. +|
T Consensus 146 ~~~~--~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el---~~~l~~-~f 219 (252)
T 2gb4_A 146 PRAN--IGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAEL---KRLFGT-KC 219 (252)
T ss_dssp GGGC--CCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHH---HHHHTT-TE
T ss_pred Cccc--CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHH---HHHhhC-Ce
Confidence 6421 268999998742 346789999999999999996432 11 123344 334444 58
Q ss_pred eEeEEeeee
Q 022962 246 SLLQLCSVE 254 (289)
Q Consensus 246 ~~~~~~~~~ 254 (289)
++.....++
T Consensus 220 ~v~~~~~~~ 228 (252)
T 2gb4_A 220 SMQCLEEVD 228 (252)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeccc
Confidence 877776553
No 102
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.65 E-value=3.1e-16 Score=136.31 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=92.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc--CCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL--GKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~--~~~~~~~~~fD~V~s 198 (289)
++.+|||||||+|.++..++.. +..+|+|+|+|+.|++.|+++++..+ .+++++++|++++ +.. +++||+|++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~---~~~fD~V~~ 134 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLP---DGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSC---TTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccC---CCceEEEEE
Confidence 3679999999999999998754 33599999999999999999888777 4799999999987 432 378999999
Q ss_pred c--C-------cccHHHHHHHHccccccCeEEEEEEcCCc----------HHHH--HHHHHHHHHhCCeE
Q 022962 199 R--A-------VAEMRILAEYCLPLVRVGGLFVAAKGHDP----------QEEV--KNSERAVQLMGASL 247 (289)
Q Consensus 199 n--~-------~~~~~~ll~~~~~~LkpgG~l~~~~g~~~----------~~ei--~~~~~~l~~~g~~~ 247 (289)
+ . ....+.+++++.++|||||+|++...... .... ......+.+.||..
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 2 1 12345789999999999999987532111 0111 22345677899974
No 103
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.65 E-value=2.2e-15 Score=138.99 Aligned_cols=140 Identities=21% Similarity=0.122 Sum_probs=108.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.++.+|||+|||+|.+++.+|... |..+|+|+|+|+.+++.|++|++..|+++++++++|+.+++.. .+.||+|+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~---~~~~D~Ii 277 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF---FPEVDRIL 277 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT---CCCCSEEE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc---cCCCCEEE
Confidence 4567899999999999999999876 7899999999999999999999999988899999999997653 25699999
Q ss_pred EcCc------------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEE
Q 022962 198 ARAV------------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAV 265 (289)
Q Consensus 198 sn~~------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv 265 (289)
+|.. ..+..+++.+.++|+|||.+++..+. .+.+. ...+ .|++..+...+. ...-.+.++
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~--~~~~~---~~~~-~g~~~~~~~~l~--~g~l~~~i~ 349 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR--PALLK---RALP-PGFALRHARVVE--QGGVYPRVF 349 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC--HHHHH---HHCC-TTEEEEEEEECC--BTTBCCEEE
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC--HHHHH---HHhh-cCcEEEEEEEEE--eCCEEEEEE
Confidence 9841 12478999999999999999998763 11122 2233 788877665442 112245566
Q ss_pred EEEe
Q 022962 266 VCLK 269 (289)
Q Consensus 266 ~~~k 269 (289)
+++|
T Consensus 350 vl~r 353 (354)
T 3tma_A 350 VLEK 353 (354)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6665
No 104
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.64 E-value=5.3e-16 Score=137.33 Aligned_cols=132 Identities=17% Similarity=0.122 Sum_probs=93.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-----------------------------C
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-----------------------------L 171 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-----------------------------~ 171 (289)
++.+|||||||+|..++.++.. ...+|+|+|+|+.|++.|+++++.... .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 3789999999999887665543 224799999999999999987654320 1
Q ss_pred CEE-EEeccccccCC-CCcCCCCceEEEEcCc--------ccHHHHHHHHccccccCeEEEEEEcCCc------------
Q 022962 172 NVQ-IVRGRAETLGK-DVSFREQYDVAVARAV--------AEMRILAEYCLPLVRVGGLFVAAKGHDP------------ 229 (289)
Q Consensus 172 ni~-~~~~d~~~~~~-~~~~~~~fD~V~sn~~--------~~~~~ll~~~~~~LkpgG~l~~~~g~~~------------ 229 (289)
+++ ++++|+.+... .....++||+|+++.+ .++..+++++.++|||||+|++......
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 244 88999987421 1112368999999832 3557899999999999999998631100
Q ss_pred -HHHHHHHHHHHHHhCCeEeEEeee
Q 022962 230 -QEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 230 -~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.-...++.+.+...||.++++...
T Consensus 214 ~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 214 VALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEeec
Confidence 001234556777999999888654
No 105
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.64 E-value=3.9e-15 Score=127.90 Aligned_cols=104 Identities=20% Similarity=0.253 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCC--cCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDV--SFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~--~~~~~fD~V 196 (289)
++.+|||||||+|..++.+|...| +.+|+++|+++.+++.|+++++..++.+ ++++++|+.+..... ...++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 377999999999999999998887 7899999999999999999999999865 999999997642110 001579999
Q ss_pred EEcCc-ccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAV-AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~-~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
++.+. ..+..+++.+.++|+|||.+++.
T Consensus 138 ~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 138 FIDADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 99864 46789999999999999988864
No 106
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.64 E-value=6.4e-15 Score=130.84 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=99.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHc-C--CCCEEEEeccccccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLT-Q--LLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~-~--l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
++.+|||+|||+|.+++.++.. .|..+|+++|+|+.+++.|+++.+.. + ..+++++++|+.+.... +++||+|
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~---~~~~D~v 175 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP---DGSVDRA 175 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC---TTCEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC---CCceeEE
Confidence 4789999999999999999985 46789999999999999999999887 6 56899999999887432 3689999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHH-hCCeEeEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL-MGASLLQL 250 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~-~g~~~~~~ 250 (289)
+++.. +...+++.+.++|+|||++++.... .+.+.++.+.++. .+|...++
T Consensus 176 ~~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~~~f~~~~~ 227 (280)
T 1i9g_A 176 VLDML-APWEVLDAVSRLLVAGGVLMVYVAT--VTQLSRIVEALRAKQCWTEPRA 227 (280)
T ss_dssp EEESS-CGGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHHSSBCCCEE
T ss_pred EECCc-CHHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhcCCcCCcEE
Confidence 99653 4558899999999999999987653 2444555556666 67755443
No 107
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.64 E-value=5.2e-15 Score=133.61 Aligned_cols=146 Identities=14% Similarity=0.072 Sum_probs=107.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH--cC--CCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL--TQ--LLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~--~~--l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++... .+ ..+++++++|+.+.... .+++||+|+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK--FKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG--CSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--CCCCceEEE
Confidence 5799999999999999998766778999999999999999998754 22 35799999998774221 136899999
Q ss_pred EcCccc---------HHHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCC-CCceEEE
Q 022962 198 ARAVAE---------MRILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSP-FGQRTAV 265 (289)
Q Consensus 198 sn~~~~---------~~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~-~~~r~lv 265 (289)
++.... ...+++.+.++|+|||.+++..+. ...+.+..+.+.+++. |..+.......|.- .+.+..+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~~f~ 247 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPITRVYLGFMTTYPSGMWSYT 247 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEEEEEEEECTTSTTSEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCceEEEEeecCccCCCceEEE
Confidence 985432 268999999999999999987653 3456667777777777 44444443333432 4566666
Q ss_pred EEEec
Q 022962 266 VCLKS 270 (289)
Q Consensus 266 ~~~k~ 270 (289)
++.|.
T Consensus 248 ~as~~ 252 (296)
T 1inl_A 248 FASKG 252 (296)
T ss_dssp EEESS
T ss_pred EecCC
Confidence 66654
No 108
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=2.3e-15 Score=136.39 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=86.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++..+ +.+|+|+|+|+.+++.+++++...++. +++++++|+.+++ ++||+|+++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~fD~v~~~ 162 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA------EPVDRIVSI 162 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC------CCCSEEEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC------CCcCEEEEe
Confidence 47899999999999999999776 569999999999999999999988875 5999999998763 679999998
Q ss_pred C----c--ccHHHHHHHHccccccCeEEEEEE
Q 022962 200 A----V--AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 200 ~----~--~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
. + .++..+++++.++|||||++++..
T Consensus 163 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 163 EAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp SCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4 3 567899999999999999999754
No 109
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.64 E-value=1.7e-15 Score=139.00 Aligned_cols=135 Identities=13% Similarity=0.142 Sum_probs=100.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC--EEEEeccccccCCCC-cCCCCceEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN--VQIVRGRAETLGKDV-SFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n--i~~~~~d~~~~~~~~-~~~~~fD~V~ 197 (289)
++.+|||+|||+|.+++.+|.. +.+|++||+|+.+++.|++|++.+++++ ++++++|+.++.... ...++||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4679999999999999999975 4599999999999999999999999874 999999998753210 0026899999
Q ss_pred EcCc--------------ccHHHHHHHHccccccCeEEEEEEcCCc---HHHHHHHH-HHHHHhCCeEeEEeeeecCCC
Q 022962 198 ARAV--------------AEMRILAEYCLPLVRVGGLFVAAKGHDP---QEEVKNSE-RAVQLMGASLLQLCSVESQSP 258 (289)
Q Consensus 198 sn~~--------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~---~~ei~~~~-~~l~~~g~~~~~~~~~~~~~~ 258 (289)
++.. .++..+++.+.++|+|||.+++...... .+.+.++. +.+.+.|+.+. ...+..|..
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~-~~e~~~p~~ 308 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA-SGELVIREA 308 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE-EEEEEEECC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE-EEEEecccC
Confidence 9742 2467899999999999999887664332 33444333 34556788765 333444443
No 110
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.64 E-value=8.8e-15 Score=135.43 Aligned_cols=147 Identities=16% Similarity=0.105 Sum_probs=108.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.++.+|||||||+|.++..++..+|+.+++++|+ +.+++.+++++...++. +++++++|+.+ +. +..||+|+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~----~~~~D~v~ 253 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL----PVTADVVL 253 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC----SCCEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC----CCCCCEEE
Confidence 34578999999999999999999999999999999 99999999999988886 79999999875 22 13499999
Q ss_pred EcCcc----c--HHHHHHHHccccccCeEEEEEEc--C--Cc-HH-------------------HHHHHHHHHHHhCCeE
Q 022962 198 ARAVA----E--MRILAEYCLPLVRVGGLFVAAKG--H--DP-QE-------------------EVKNSERAVQLMGASL 247 (289)
Q Consensus 198 sn~~~----~--~~~ll~~~~~~LkpgG~l~~~~g--~--~~-~~-------------------ei~~~~~~l~~~g~~~ 247 (289)
++.+- + ...+++++.++|+|||++++... . .. .. ...++.+.++++||++
T Consensus 254 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 333 (374)
T 1qzz_A 254 LSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLAL 333 (374)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEE
T ss_pred EeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 97532 2 34899999999999999987543 1 11 00 1234556677899999
Q ss_pred eEEeeeecCCCCCceEEEEEEecC
Q 022962 248 LQLCSVESQSPFGQRTAVVCLKSR 271 (289)
Q Consensus 248 ~~~~~~~~~~~~~~r~lv~~~k~~ 271 (289)
+++..+..........++.+++..
T Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 334 ASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEEEECCSSCSSCEEEEEEEECC
T ss_pred EEEEECCCCcccCCcEEEEEEECc
Confidence 888755211001122566666654
No 111
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.64 E-value=3.2e-15 Score=133.29 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=86.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+++....++ .+++++++|+.+.+.. .+++||+|+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~~ 140 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD--LGKEFDVISSQ 140 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC--CSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC--CCCCcCEEEEC
Confidence 3789999999999999988876 456999999999999999999988876 4699999999987541 14789999987
Q ss_pred Cc--------ccHHHHHHHHccccccCeEEEEEE
Q 022962 200 AV--------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 200 ~~--------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.. .+...+++++.++|+|||++++..
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 42 356889999999999999999764
No 112
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=1.4e-15 Score=126.59 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=86.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCC-cCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDV-SFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~-~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.++. .+..+|+|+|+|+.+++.|+++++.+++ ++++++++|+.+..... ..+++||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 367999999999999998876 4567999999999999999999999887 47999999998743200 01368999999
Q ss_pred cCc---ccHHHHHHHH--ccccccCeEEEEEEcC
Q 022962 199 RAV---AEMRILAEYC--LPLVRVGGLFVAAKGH 227 (289)
Q Consensus 199 n~~---~~~~~ll~~~--~~~LkpgG~l~~~~g~ 227 (289)
+.. ......++.+ .++|+|||.+++....
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 123 DPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 853 3566777777 8999999999987754
No 113
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.7e-15 Score=136.08 Aligned_cols=103 Identities=18% Similarity=0.120 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHc--CCCCEEEEeccccccCCCC--c-CCCCce
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLT--QLLNVQIVRGRAETLGKDV--S-FREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~--~l~ni~~~~~d~~~~~~~~--~-~~~~fD 194 (289)
++.+|||||||+|..+..++..+ +..+|+|+|+|+.+++.|+++++.. ...+++++++|+++++... . ..++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 37899999999999999999876 8899999999999999999999886 2458999999999876431 0 026899
Q ss_pred EEEEcCcc---cHHHHHHHHccccccCeEEEE
Q 022962 195 VAVARAVA---EMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 195 ~V~sn~~~---~~~~ll~~~~~~LkpgG~l~~ 223 (289)
+|+++... ++..+++++.++|+|||.+++
T Consensus 116 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 116 MITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 99998421 789999999999999999987
No 114
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.63 E-value=2.7e-15 Score=136.97 Aligned_cols=146 Identities=14% Similarity=0.062 Sum_probs=107.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--C--CCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--Q--LLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--~--l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|+++.... + ..+++++++|+.+.... .+++||+|+
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--VTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH--CCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh--cCCCceEEE
Confidence 57999999999999999987667789999999999999999987652 2 24799999998774211 136899999
Q ss_pred EcCcc------cH--HHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCC-CceEEEE
Q 022962 198 ARAVA------EM--RILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSPF-GQRTAVV 266 (289)
Q Consensus 198 sn~~~------~~--~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~-~~r~lv~ 266 (289)
++... .. ..+++.+.++|+|||.+++..+. ...+.+..+.+.++.. |..++......|.-. +.+..++
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCeEEEEEEeccccCceEEEEE
Confidence 98532 11 78999999999999999987643 3556677777777665 444555444344433 3444555
Q ss_pred EEec
Q 022962 267 CLKS 270 (289)
Q Consensus 267 ~~k~ 270 (289)
+.+.
T Consensus 274 as~~ 277 (321)
T 2pt6_A 274 CSKT 277 (321)
T ss_dssp EESS
T ss_pred eeCC
Confidence 5543
No 115
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.63 E-value=4.9e-16 Score=136.31 Aligned_cols=104 Identities=19% Similarity=0.167 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCc---CCCCceE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVS---FREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~---~~~~fD~ 195 (289)
++.+|||||||+|..++.+|...+ +++|+++|+++++++.|+++++..++. +|+++++|+.+...... ..++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 367999999999999999998875 789999999999999999999999985 79999999977532100 0268999
Q ss_pred EEEcCc-ccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAV-AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~-~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|++++. ..+..+++.+.++|+|||.+++.
T Consensus 140 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 140 IFIDADKTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence 999864 46788999999999999999874
No 116
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=2.6e-15 Score=131.38 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++..+|+.+|+|+|+|+.+++.++++ ..+++++++|+++++ . +++||+|+++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~---~~~fD~v~~~~ 103 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-P---AQKADLLYANA 103 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-C---SSCEEEEEEES
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-c---cCCcCEEEEeC
Confidence 36799999999999999999888889999999999999999886 347999999999876 2 37899999985
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEc
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+.+...+++++.++|+|||++++...
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 104 VFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred chhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 35789999999999999999998753
No 117
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.63 E-value=9.3e-16 Score=131.86 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=87.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcC---CCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSF---REQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~---~~~fD~V 196 (289)
+.+|||||||+|..++.++...| +.+|+++|+|+.+++.|+++++..++.+ ++++++|+.+....... .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 67999999999999999998876 7899999999999999999999999865 99999999764211000 1689999
Q ss_pred EEcCc-ccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAV-AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~-~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
++++. ..+..+++.+.++|+|||++++.
T Consensus 145 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 145 YIDADKANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 99864 45889999999999999999874
No 118
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.63 E-value=3.3e-15 Score=136.01 Aligned_cols=129 Identities=19% Similarity=0.197 Sum_probs=100.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
..++.+|||+|||+|..++.+|...+ .++|+|+|+|+.+++.++++++.+|+.|++++++|+.++.. .+++||+|+
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~---~~~~fD~Il 192 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE---LNVEFDKIL 192 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG---GCCCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc---ccccCCEEE
Confidence 44588999999999999999998764 58999999999999999999999999899999999988754 236899999
Q ss_pred EcCcc--------------------------cHHHHHHHHccccccCeEEEEEEcC-CcHHHHHHHHHHHHHhCCeEeEE
Q 022962 198 ARAVA--------------------------EMRILAEYCLPLVRVGGLFVAAKGH-DPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 198 sn~~~--------------------------~~~~ll~~~~~~LkpgG~l~~~~g~-~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
+++.. ....+++.+.++|||||++++..-. ...+.-..+...++..||+++.+
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEEecC
Confidence 97320 0158999999999999999885432 22221122334556788766544
No 119
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.62 E-value=4.8e-15 Score=132.78 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=107.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--C---------CCCEEEEeccccccCCCCcCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--Q---------LLNVQIVRGRAETLGKDVSFR 190 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--~---------l~ni~~~~~d~~~~~~~~~~~ 190 (289)
+.+|||||||+|..+..+++. +..+|++||+|+.+++.|+++. .. + ..+++++++|+.++... +
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~---~ 150 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN---N 150 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH---C
T ss_pred CCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc---c
Confidence 579999999999999999877 7789999999999999999987 43 2 24799999998764221 3
Q ss_pred CCceEEEEcCcc------c--HHHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCC
Q 022962 191 EQYDVAVARAVA------E--MRILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSPFG 260 (289)
Q Consensus 191 ~~fD~V~sn~~~------~--~~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~ 260 (289)
++||+|+++... . ...+++.+.++|+|||.+++..+. ...+.+..+.+.++.. |..+.......|...+
T Consensus 151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~vP~~~g 229 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDRVYYYSFPVIGYAS 229 (281)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEEEEEEECCTTSSS
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCceEEEEEecCCCCc
Confidence 689999998642 1 378899999999999999987543 3455666666666666 5444544333455456
Q ss_pred ceEEEEEEec
Q 022962 261 QRTAVVCLKS 270 (289)
Q Consensus 261 ~r~lv~~~k~ 270 (289)
.+..+++.|.
T Consensus 230 ~~~~~~as~~ 239 (281)
T 1mjf_A 230 PWAFLVGVKG 239 (281)
T ss_dssp SEEEEEEEES
T ss_pred eEEEEEeeCC
Confidence 6777777765
No 120
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.62 E-value=7.3e-16 Score=142.27 Aligned_cols=98 Identities=20% Similarity=0.279 Sum_probs=85.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.+++. +..+|+|+|+|+ +++.|+++++.+++.+ ++++++|+++++.+ +++||+|+++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~Iis~ 140 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELP---VEKVDIIISE 140 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SSCEEEEEEC
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCC---CCceEEEEEc
Confidence 3789999999999999999976 667999999995 9999999999999875 99999999998543 3789999997
Q ss_pred Cc-------ccHHHHHHHHccccccCeEEEE
Q 022962 200 AV-------AEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 200 ~~-------~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
.+ ..+..+++.+.++|||||.++.
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 42 4678999999999999999873
No 121
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=6.2e-16 Score=136.49 Aligned_cols=123 Identities=15% Similarity=0.029 Sum_probs=95.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++. ++.+|+|+|+|+.+++.++++. |++++++|+++++.. +++||+|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~---~~~fD~v~~~~ 102 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALP---DKSVDGVISIL 102 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSC---TTCBSEEEEES
T ss_pred CCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCC---CCCEeEEEEcc
Confidence 378999999999999999986 6789999999999988776532 799999999987643 37899999985
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCC----------cHH-----------HHHHHHHHHHHhCCeEeEEeeeec
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHD----------PQE-----------EVKNSERAVQLMGASLLQLCSVES 255 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~----------~~~-----------ei~~~~~~l~~~g~~~~~~~~~~~ 255 (289)
+.++..+++++.++|| ||++++..... ... ....+. .++++||..+++..+..
T Consensus 103 ~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~~~ 180 (261)
T 3ege_A 103 AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPFLL 180 (261)
T ss_dssp CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEECCE
T ss_pred hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEecC
Confidence 4578999999999999 99777654220 000 123345 78899998888776543
Q ss_pred C
Q 022962 256 Q 256 (289)
Q Consensus 256 ~ 256 (289)
|
T Consensus 181 p 181 (261)
T 3ege_A 181 P 181 (261)
T ss_dssp E
T ss_pred C
Confidence 3
No 122
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.62 E-value=2.9e-15 Score=130.27 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=94.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++ ++++++|+.++..+ ..+++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~-~~~~~fD~i~~~~ 109 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKS-LPDKYLDGVMISH 109 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHT-SCTTCBSEEEEES
T ss_pred CCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhh-cCCCCeeEEEECC
Confidence 4789999999999999999876 56899999999999988874 78889999875211 1137899999984
Q ss_pred ----cc--cHHHHHHHHccccccCeEEEEEEcCC-cHH---------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 201 ----VA--EMRILAEYCLPLVRVGGLFVAAKGHD-PQE---------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ----~~--~~~~ll~~~~~~LkpgG~l~~~~g~~-~~~---------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+. ++..+++++.++|||||++++..... ... ...++.+.++.+||.++++..+
T Consensus 110 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 184 (240)
T 3dli_A 110 FVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFF 184 (240)
T ss_dssp CGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEE
T ss_pred chhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEe
Confidence 23 56899999999999999999865321 111 1134566778999998888765
No 123
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.62 E-value=6.8e-15 Score=125.16 Aligned_cols=95 Identities=16% Similarity=0.100 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.+++ .+..+++++++|+.++ .. +++||+|+++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~-~~---~~~~D~v~~~~ 115 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW-TP---DRQWDAVFFAH 115 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC-CC---SSCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC-CC---CCceeEEEEec
Confidence 4679999999999999999987 6799999999999999987 5667899999999887 22 37899999985
Q ss_pred c----cc--HHHHHHHHccccccCeEEEEEE
Q 022962 201 V----AE--MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~----~~--~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ .+ ...+++++.++|+|||.+++..
T Consensus 116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 2 22 4889999999999999999764
No 124
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.62 E-value=4.2e-15 Score=128.38 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=78.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc-C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR-A 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn-~ 200 (289)
+.+|||+|||+|..+..++...+ +|+|+|+|+.+++.++++. .+++++++|+.+++. +++||+|+|. .
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----~~~~D~v~~~~~ 109 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL----GRKFSAVVSMFS 109 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC----SSCEEEEEECTT
T ss_pred CCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc----CCCCcEEEEcCc
Confidence 67999999999999999998754 9999999999999998753 468999999988754 3789999953 2
Q ss_pred ----c---ccHHHHHHHHccccccCeEEEEE
Q 022962 201 ----V---AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ----~---~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+ .+...+++.+.++|+|||.+++.
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 110 SVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp GGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2 45678999999999999999875
No 125
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.62 E-value=3.9e-15 Score=132.77 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.+++++...++ +++++++|+.++.. +++||+|+++.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----~~~fD~i~~~~ 192 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI----QENYDFIVSTV 192 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC----CSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc----cCCccEEEEcc
Confidence 3789999999999999999976 56999999999999999999999988 89999999998754 37899999985
Q ss_pred c------ccHHHHHHHHccccccCeEEEEEE
Q 022962 201 V------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ .....+++.+.++|+|||.+++..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 3 346799999999999999987754
No 126
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.62 E-value=6.8e-15 Score=131.46 Aligned_cols=146 Identities=18% Similarity=0.126 Sum_probs=108.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--CC--CCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--QL--LNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--~l--~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++..+..+|++||+|+.+++.|+++.... ++ ++++++++|+.+.... .+++||+|+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~fD~Ii 153 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK--SENQYDVIM 153 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT--CCSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--CCCCeeEEE
Confidence 57999999999999999887656789999999999999999987542 23 4799999998874221 136899999
Q ss_pred EcCccc--------HHHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCC-CCceEEEE
Q 022962 198 ARAVAE--------MRILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSP-FGQRTAVV 266 (289)
Q Consensus 198 sn~~~~--------~~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~-~~~r~lv~ 266 (289)
++.... ...+++.+.++|+|||.+++..+. ...+.+..+.+.+++. |..+.......|.- .+.+..++
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEEEEECCTTSGGGCEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEEEEEecCcccCcceEEEE
Confidence 985432 268999999999999999987543 2356667777777766 55555544333442 35666666
Q ss_pred EEec
Q 022962 267 CLKS 270 (289)
Q Consensus 267 ~~k~ 270 (289)
+.|.
T Consensus 233 ask~ 236 (275)
T 1iy9_A 233 GSKK 236 (275)
T ss_dssp EESS
T ss_pred eeCC
Confidence 6654
No 127
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.62 E-value=3.4e-15 Score=133.53 Aligned_cols=125 Identities=16% Similarity=0.161 Sum_probs=98.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
.++|.+|||+|||+|.+++.+|.. +..+|+|+|+|+.+++.+++|++.+++++ ++++++|+.++.. .+.||.|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~----~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----CSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc----ccCCCEEE
Confidence 456899999999999999999976 46799999999999999999999999975 9999999988754 36899999
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEEEc----CCcHHHHHHHHHHHHHhCCeEe
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAAKG----HDPQEEVKNSERAVQLMGASLL 248 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~~g----~~~~~ei~~~~~~l~~~g~~~~ 248 (289)
+|.......++..+.++||+||++.+..- .........+.+..+..|+.+.
T Consensus 198 ~~~p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 198 MGYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp ECCCSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred ECCCCcHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEE
Confidence 99766666788888899999999865421 1111112333445567888653
No 128
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.62 E-value=1.1e-15 Score=125.31 Aligned_cols=103 Identities=25% Similarity=0.319 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC-CCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK-DVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~-~~~~~~~fD~V~sn~ 200 (289)
+.+|||+|||+|.+++.++... .+|+|+|+|+.+++.|+++++.+++ +++++++|+.+... .....++||+|+++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 6799999999999999999764 3599999999999999999999888 89999999987421 100124799999985
Q ss_pred c--ccHHHHHHHHc--cccccCeEEEEEEcC
Q 022962 201 V--AEMRILAEYCL--PLVRVGGLFVAAKGH 227 (289)
Q Consensus 201 ~--~~~~~ll~~~~--~~LkpgG~l~~~~g~ 227 (289)
. ...+.+++.+. ++|+|||.+++....
T Consensus 119 ~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYAMDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CTTSCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CCchhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 2 45566777777 999999999987754
No 129
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.62 E-value=2.3e-15 Score=128.49 Aligned_cols=131 Identities=18% Similarity=0.124 Sum_probs=97.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++ .+|+|+|+|+. +++++++|+.+++.. +++||+|+++.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~---~~~fD~v~~~~ 123 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------------DPRVTVCDMAQVPLE---DESVDVAVFCL 123 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------------STTEEESCTTSCSCC---TTCEEEEEEES
T ss_pred CCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------------CceEEEeccccCCCC---CCCEeEEEEeh
Confidence 36799999999999876652 69999999986 467889999886543 36899999985
Q ss_pred c---ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEecCCCCCCC
Q 022962 201 V---AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKSRRTPKKY 277 (289)
Q Consensus 201 ~---~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~~~~p~~~ 277 (289)
+ .+...+++++.++|+|||.+++...........++.+.++..||.+++.. ...+...+++++|....+.++
T Consensus 124 ~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~-----~~~~~~~~~~~~k~~~~~~~~ 198 (215)
T 2zfu_A 124 SLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKD-----LTNSHFFLFDFQKTGPPLVGP 198 (215)
T ss_dssp CCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEE-----CCSTTCEEEEEEECSSCSSCT
T ss_pred hccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEe-----cCCCeEEEEEEEecCccccch
Confidence 4 57889999999999999999986532211123444556779999887653 233456788888876666543
Q ss_pred CC
Q 022962 278 PR 279 (289)
Q Consensus 278 pr 279 (289)
++
T Consensus 199 ~~ 200 (215)
T 2zfu_A 199 KA 200 (215)
T ss_dssp TC
T ss_pred hh
Confidence 33
No 130
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.62 E-value=2.6e-15 Score=127.70 Aligned_cols=101 Identities=19% Similarity=0.248 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
.++.+|||+|||+|..+..++.. +.+|+++|+|+.+++.++++.+.+++++++++++|+.+.... .++||+|+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D~i~~~ 150 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA---RAPFDAIIVT 150 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---GCCEEEEEES
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc---CCCccEEEEc
Confidence 45789999999999999999987 689999999999999999999999988999999999875432 3789999998
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcC
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
.... .+.+.+.++|+|||++++..+.
T Consensus 151 ~~~~--~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 151 AAPP--EIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SBCS--SCCTHHHHTEEEEEEEEEEECS
T ss_pred cchh--hhhHHHHHhcccCcEEEEEEcC
Confidence 5331 1223577899999999998765
No 131
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=3.1e-15 Score=127.38 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=84.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.+++.++... ..+|+|+|+|+.+++.|+++++.+++++++++++|+.++... ..++||+|+++..
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~~~fD~V~~~~p 131 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ--KGTPHNIVFVDPP 131 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS--CCCCEEEEEECCS
T ss_pred CCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh--cCCCCCEEEECCC
Confidence 6799999999999999877553 359999999999999999999999988899999999874221 1368999999854
Q ss_pred ---ccHHHHHHHHc--cccccCeEEEEEEc
Q 022962 202 ---AEMRILAEYCL--PLVRVGGLFVAAKG 226 (289)
Q Consensus 202 ---~~~~~ll~~~~--~~LkpgG~l~~~~g 226 (289)
.....+++.+. ++|+|||.+++...
T Consensus 132 ~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 132 FRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp SSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 35567777775 46999999998764
No 132
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.61 E-value=1.1e-14 Score=134.31 Aligned_cols=128 Identities=13% Similarity=0.158 Sum_probs=102.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||||||+|.++..++..+|+.+++++|+ +.+++.++++++..++.+ ++++.+|+.+.+. ..+|+|++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~D~v~~ 262 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-----PEADAVLF 262 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-----CCCSEEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-----CCCCEEEE
Confidence 3578999999999999999999999999999999 999999999999888765 9999999987643 23499998
Q ss_pred cCc----cc--HHHHHHHHccccccCeEEEEEEcC---------------------CcH----HHHHHHHHHHHHhCCeE
Q 022962 199 RAV----AE--MRILAEYCLPLVRVGGLFVAAKGH---------------------DPQ----EEVKNSERAVQLMGASL 247 (289)
Q Consensus 199 n~~----~~--~~~ll~~~~~~LkpgG~l~~~~g~---------------------~~~----~ei~~~~~~l~~~g~~~ 247 (289)
+.+ .+ ...+++++.++|+|||++++.... ... ....++.+.++++||+.
T Consensus 263 ~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~ 342 (359)
T 1x19_A 263 CRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKD 342 (359)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEE
T ss_pred echhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCce
Confidence 742 23 688999999999999999775410 000 12234556777999998
Q ss_pred eEEeee
Q 022962 248 LQLCSV 253 (289)
Q Consensus 248 ~~~~~~ 253 (289)
+++..+
T Consensus 343 v~~~~~ 348 (359)
T 1x19_A 343 VTMVRK 348 (359)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888754
No 133
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.61 E-value=1e-14 Score=132.73 Aligned_cols=128 Identities=17% Similarity=0.159 Sum_probs=102.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||+|||+|..+..++..+|+.+++++|++ .+++.+++++...++. +++++.+|+.+.+. ++.||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY----GNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC----CSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC----CCCCcEEEE
Confidence 34789999999999999999999999999999999 9999999999988875 59999999987543 245999999
Q ss_pred cCc------ccHHHHHHHHccccccCeEEEEEEcCCc------H-H-----------------HHHHHHHHHHHhCCeEe
Q 022962 199 RAV------AEMRILAEYCLPLVRVGGLFVAAKGHDP------Q-E-----------------EVKNSERAVQLMGASLL 248 (289)
Q Consensus 199 n~~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~------~-~-----------------ei~~~~~~l~~~g~~~~ 248 (289)
+.+ .+...+++++.++|+|||++++...... . . ...++.+.++++||+.+
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHS 318 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCee
Confidence 642 3457999999999999999887643111 0 0 13445667789999988
Q ss_pred EEee
Q 022962 249 QLCS 252 (289)
Q Consensus 249 ~~~~ 252 (289)
++..
T Consensus 319 ~~~~ 322 (335)
T 2r3s_A 319 QLHS 322 (335)
T ss_dssp EEEC
T ss_pred eEEE
Confidence 8764
No 134
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.61 E-value=4.2e-15 Score=132.93 Aligned_cols=149 Identities=13% Similarity=0.053 Sum_probs=101.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc-----------------CC-------------
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT-----------------QL------------- 170 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~-----------------~l------------- 170 (289)
++.+|||||||+|..++.++. .+..+|+|+|+|+.|++.|+++++.. +.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367999999999996554443 34679999999999999998865421 10
Q ss_pred CCEEEEeccccc-cCCCC--cCCCCceEEEEcC--------cccHHHHHHHHccccccCeEEEEEE---------cC---
Q 022962 171 LNVQIVRGRAET-LGKDV--SFREQYDVAVARA--------VAEMRILAEYCLPLVRVGGLFVAAK---------GH--- 227 (289)
Q Consensus 171 ~ni~~~~~d~~~-~~~~~--~~~~~fD~V~sn~--------~~~~~~ll~~~~~~LkpgG~l~~~~---------g~--- 227 (289)
..++++++|+.+ ++... ..+++||+|+|+. ..++..+++++.++|||||+|++.. +.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 015677889887 43211 1135799999984 3367899999999999999999752 10
Q ss_pred -CcHHHHHHHHHHHHHhCCeEeEEeeeecC----C--CCCceEEEEEEec
Q 022962 228 -DPQEEVKNSERAVQLMGASLLQLCSVESQ----S--PFGQRTAVVCLKS 270 (289)
Q Consensus 228 -~~~~ei~~~~~~l~~~g~~~~~~~~~~~~----~--~~~~r~lv~~~k~ 270 (289)
...-...++.+.++..||.++++..+..+ . .+-.+.++++.|+
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQK 279 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEEECCGGGCCTTBCCCEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeEeeccccccccccCcceEEEEEEec
Confidence 00012234556677999999888766521 1 2335677777665
No 135
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.61 E-value=2.8e-15 Score=136.50 Aligned_cols=146 Identities=12% Similarity=0.041 Sum_probs=105.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH--cC---CCCEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL--TQ---LLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~--~~---l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
+.+|||||||+|..+..+++..+..+|++||+|+.+++.|+++... .+ ..+++++++|+.+.... .+++||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER--TEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH--CCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh--cCCCccEE
Confidence 5799999999999999998766778999999999999999998765 22 35799999999874211 13789999
Q ss_pred EEcCccc-----------HHHHHHHHccccccCeEEEEEEcC---CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCce
Q 022962 197 VARAVAE-----------MRILAEYCLPLVRVGGLFVAAKGH---DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQR 262 (289)
Q Consensus 197 ~sn~~~~-----------~~~ll~~~~~~LkpgG~l~~~~g~---~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r 262 (289)
+++.... ...+++.+.++|+|||.+++..+. ...+.+..+.+.++.. |..+.......|...+.+
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vP~~~g~~ 234 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYVRSYKNHIPGFFLNF 234 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEEEEEEEEEGGGTEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCceEEEEEecCCCCCeE
Confidence 9985332 378999999999999999987543 2234455556666655 444444433335444556
Q ss_pred EEEEEEec
Q 022962 263 TAVVCLKS 270 (289)
Q Consensus 263 ~lv~~~k~ 270 (289)
..+++.|.
T Consensus 235 ~~~~as~~ 242 (314)
T 1uir_A 235 GFLLASDA 242 (314)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 66666554
No 136
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.61 E-value=9.5e-15 Score=128.07 Aligned_cols=131 Identities=14% Similarity=0.113 Sum_probs=96.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-----------------------------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-----------------------------LN 172 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-----------------------------~n 172 (289)
+.+|||||||+|.+++.++...+ .+|+|+|+|+.+++.++++....+. .+
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 67999999999999988886543 5999999999999999988765431 02
Q ss_pred E-EEEeccccccCC-CCcCCCCceEEEEcCc--------ccHHHHHHHHccccccCeEEEEEEcCC-------------c
Q 022962 173 V-QIVRGRAETLGK-DVSFREQYDVAVARAV--------AEMRILAEYCLPLVRVGGLFVAAKGHD-------------P 229 (289)
Q Consensus 173 i-~~~~~d~~~~~~-~~~~~~~fD~V~sn~~--------~~~~~ll~~~~~~LkpgG~l~~~~g~~-------------~ 229 (289)
+ +++++|+.+... .....++||+|+++.+ .++..+++++.++|||||++++..... .
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~ 215 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSL 215 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccccc
Confidence 7 899999987643 1111268999999742 257899999999999999999754110 0
Q ss_pred HHHHHHHHHHHHHhCCeEeEEeee
Q 022962 230 QEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 230 ~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.-...++.+.+..+||.++++...
T Consensus 216 ~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 216 PLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEEEEe
Confidence 001224455677999999888755
No 137
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.61 E-value=5e-15 Score=136.00 Aligned_cols=122 Identities=12% Similarity=0.104 Sum_probs=97.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||+|||+|.+++. |. ++.+|+|+|+|+.+++.|++|++.+++ ++++++++|+.++. ++||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------CCCcEEEE
Confidence 4688999999999999999 76 478999999999999999999999998 47999999998864 57999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHh-CCeEeEEeee
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLM-GASLLQLCSV 253 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~-g~~~~~~~~~ 253 (289)
+.......+++.+.++|+|||.+++.......++. .+.+... ++++..+..+
T Consensus 265 dpP~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~---~~~l~~~~~~~i~~~~~v 317 (336)
T 2yx1_A 265 NLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKA---IKLFEKKCDCEVLEKRIV 317 (336)
T ss_dssp CCTTTGGGGHHHHHHHEEEEEEEEEEEEESSSHHH---HHHHHHHSEEEEEEEEEE
T ss_pred CCcHhHHHHHHHHHHHcCCCCEEEEEEeecCchHH---HHHHHHhcCCcEEEEEEE
Confidence 96555568899999999999998875432223333 3344455 7776655544
No 138
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.61 E-value=1.1e-15 Score=135.31 Aligned_cols=93 Identities=22% Similarity=0.160 Sum_probs=79.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||||||+|..+..|+.. ..+|+|||+|+.|++.|++ ..+++++++|+++++.+ +++||+|+|..
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~~---~~sfD~v~~~~~ 108 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGLP---PASVDVAIAAQA 108 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCCC---SSCEEEEEECSC
T ss_pred CCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhccc---CCcccEEEEeee
Confidence 569999999999999999865 4699999999999987653 34799999999998764 47999999984
Q ss_pred --cccHHHHHHHHccccccCeEEEEEE
Q 022962 201 --VAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 --~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..+.+.+++++.++|||||+|++..
T Consensus 109 ~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 109 MHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 2367899999999999999998754
No 139
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.60 E-value=6.8e-15 Score=121.87 Aligned_cols=126 Identities=16% Similarity=0.037 Sum_probs=92.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.+++.++... +|+|+|+|+.|++. ..+++++++|+.+... +++||+|++|..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~----~~~fD~i~~n~~ 87 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---------HRGGNLVRADLLCSIN----QESVDVVVFNPP 87 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---------CSSSCEEECSTTTTBC----GGGCSEEEECCC
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---------ccCCeEEECChhhhcc----cCCCCEEEECCC
Confidence 6799999999999999998764 99999999999876 3478999999987322 268999999842
Q ss_pred c-------------cHHHHHHHHccccccCeEEEEEE-cCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEE
Q 022962 202 A-------------EMRILAEYCLPLVRVGGLFVAAK-GHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVC 267 (289)
Q Consensus 202 ~-------------~~~~ll~~~~~~LkpgG~l~~~~-g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~ 267 (289)
- +...+++.+.+.+ |||.+++.. +....+++ .+.+++.||....+.... .+...++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l---~~~l~~~gf~~~~~~~~~----~~~e~~~~~ 159 (170)
T 3q87_B 88 YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEV---LARLEERGYGTRILKVRK----ILGETVYII 159 (170)
T ss_dssp CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHH---HHHHHHTTCEEEEEEEEE----CSSSEEEEE
T ss_pred CccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHH---HHHHHHCCCcEEEEEeec----cCCceEEEE
Confidence 1 2346677777777 999999865 33444444 445668999988776542 233445555
Q ss_pred EecC
Q 022962 268 LKSR 271 (289)
Q Consensus 268 ~k~~ 271 (289)
+.++
T Consensus 160 ~~~~ 163 (170)
T 3q87_B 160 KGEK 163 (170)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5443
No 140
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.60 E-value=1.8e-14 Score=134.04 Aligned_cols=128 Identities=9% Similarity=0.128 Sum_probs=99.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+| |+|.+++.++...+..+|+|+|+|+.+++.|+++++.+|+++++++++|+.+ ++.. .+++||+|++|
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~--~~~~fD~Vi~~ 248 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY--ALHKFDTFITD 248 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT--TSSCBSEEEEC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh--ccCCccEEEEC
Confidence 378999999 9999999999887778999999999999999999999998889999999988 5421 23689999999
Q ss_pred Cc---ccHHHHHHHHccccccCeE-EEEEEcC--CcHHHHHHHHHHHH-HhCCeEeEEe
Q 022962 200 AV---AEMRILAEYCLPLVRVGGL-FVAAKGH--DPQEEVKNSERAVQ-LMGASLLQLC 251 (289)
Q Consensus 200 ~~---~~~~~ll~~~~~~LkpgG~-l~~~~g~--~~~~ei~~~~~~l~-~~g~~~~~~~ 251 (289)
.. .....+++.+.++|+|||+ +++.... ........+.+.+. ..|+.+..+.
T Consensus 249 ~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 249 PPETLEAIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp CCSSHHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 53 2357899999999999994 3554443 33322233445566 7788765543
No 141
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=2.3e-15 Score=128.37 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=86.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+.+|||||||+|..++.++...+ +.+|+++|+|+.+++.|+++++..++. +++++++|+.+.... .++ ||+|+++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~-fD~v~~~ 133 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG--QRD-IDILFMD 133 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT--CCS-EEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc--CCC-CCEEEEc
Confidence 67999999999999999998876 789999999999999999999988875 599999999775221 235 9999998
Q ss_pred C-cccHHHHHHHHccccccCeEEEEE
Q 022962 200 A-VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~-~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
. ..++..+++.+.++|+|||.+++.
T Consensus 134 ~~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 134 CDVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp TTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 5 457889999999999999999874
No 142
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.60 E-value=6.3e-15 Score=127.58 Aligned_cols=98 Identities=20% Similarity=0.174 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.++++... .+++++++|+.+++.. +++||+|+++.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 115 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLP---QDSFDLAYSSL 115 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCC---TTCEEEEEEES
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCC---CCCceEEEEec
Confidence 3679999999999999998876 334999999999999999876432 3699999999887542 37899999974
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEE
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+.+...+++++.++|+|||++++..
T Consensus 116 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 116 ALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 3467899999999999999999854
No 143
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.60 E-value=1.3e-14 Score=123.68 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. ..+|+|+|+|+.+++.++++....+ +++++++|+.++.. +++||+|+++.
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~----~~~fD~v~~~~ 122 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST----AELFDLIVVAE 122 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC----SCCEEEEEEES
T ss_pred CCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC----CCCccEEEEcc
Confidence 3679999999999999999876 4699999999999999999877644 89999999998863 37899999984
Q ss_pred c----cc---HHHHHHHHccccccCeEEEEEE
Q 022962 201 V----AE---MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~----~~---~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ .+ +..+++++.++|||||.+++..
T Consensus 123 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 123 VLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 23 3677999999999999999864
No 144
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.60 E-value=5e-15 Score=128.26 Aligned_cols=103 Identities=23% Similarity=0.406 Sum_probs=88.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||+|||+|..++.++...|+.+|+++|+|+.+++.|+++++..++. +++++++|+.+.......+++||+|+++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 67999999999999999999988899999999999999999999999885 59999999987421100036899999986
Q ss_pred c-ccHHHHHHHHccccccCeEEEEE
Q 022962 201 V-AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ~-~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
. ..+..+++.+.++|+|||.+++.
T Consensus 135 ~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 135 AKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4 46789999999999999999875
No 145
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.60 E-value=2.1e-14 Score=131.44 Aligned_cols=121 Identities=13% Similarity=0.119 Sum_probs=92.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHcC-----------CCCEEEEeccccccCCCCc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLTQ-----------LLNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~~-----------l~ni~~~~~d~~~~~~~~~ 188 (289)
++.+|||+|||+|.+++.++.. .|..+|+++|+++.+++.|+++++..+ ..+++++++|+.+.... .
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~-~ 183 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED-I 183 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc-c
Confidence 4789999999999999999987 466899999999999999999988643 25799999999876321 1
Q ss_pred CCCCceEEEEcCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCC
Q 022962 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGA 245 (289)
Q Consensus 189 ~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~ 245 (289)
.+++||+|+++... ...+++.+.++|+|||.+++..+ ..+.+.++.+.++..+.
T Consensus 184 ~~~~fD~V~~~~~~-~~~~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~l~~~~~ 237 (336)
T 2b25_A 184 KSLTFDAVALDMLN-PHVTLPVFYPHLKHGGVCAVYVV--NITQVIELLDGIRTCEL 237 (336)
T ss_dssp ----EEEEEECSSS-TTTTHHHHGGGEEEEEEEEEEES--SHHHHHHHHHHHHHHTC
T ss_pred CCCCeeEEEECCCC-HHHHHHHHHHhcCCCcEEEEEeC--CHHHHHHHHHHHHhcCC
Confidence 13579999998543 34588999999999999998765 34455555666665443
No 146
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.60 E-value=1.7e-15 Score=133.20 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=88.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCc----CCCCceE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVS----FREQYDV 195 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~----~~~~fD~ 195 (289)
+.+|||||||+|..++.+|...| +++|+++|+|+++++.|+++++..++. +|+++++|+.+...... ..++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 67999999999999999999877 789999999999999999999999884 69999999976421100 0368999
Q ss_pred EEEcC-cccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARA-VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~-~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|++++ ..++..+++.+.++|+|||.+++.
T Consensus 160 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 160 IFVDADKDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence 99986 457889999999999999999874
No 147
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.60 E-value=5.2e-15 Score=137.91 Aligned_cols=103 Identities=14% Similarity=0.134 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC---CEEEEeccccccCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL---NVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~---ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
.+.+|||+|||+|.+++.++...|+.+|+|+|+|+.+++.++++++.+++. +++++.+|+.+... +++||+|+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~----~~~fD~Ii 297 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE----PFRFNAVL 297 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC----TTCEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC----CCCeeEEE
Confidence 357999999999999999999999999999999999999999999998875 58999999987322 36899999
Q ss_pred EcCc---------ccHHHHHHHHccccccCeEEEEEEcC
Q 022962 198 ARAV---------AEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 198 sn~~---------~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
+|.. .....+++++.++|+|||.+++....
T Consensus 298 ~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 298 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp ECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred ECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9842 12357899999999999999987543
No 148
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.60 E-value=8.8e-15 Score=135.52 Aligned_cols=143 Identities=8% Similarity=0.036 Sum_probs=108.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
...+|||||||+|.++..++..+|+.+++++|+ +.+++.|++++...++ ++|+++.+|+.+...+ ++++||+|+++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP--FPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC--CCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC--CCCCcCEEEEe
Confidence 367999999999999999999999999999999 9999999999888876 4699999999875200 12689999987
Q ss_pred Cc------ccHHHHHHHHccccccCeEEEEEEc---CCc-HH-----------------------HHHHHHHHHHHhCCe
Q 022962 200 AV------AEMRILAEYCLPLVRVGGLFVAAKG---HDP-QE-----------------------EVKNSERAVQLMGAS 246 (289)
Q Consensus 200 ~~------~~~~~ll~~~~~~LkpgG~l~~~~g---~~~-~~-----------------------ei~~~~~~l~~~g~~ 246 (289)
.+ .+...+++++.++|+|||++++... ... .. ...++.+.++++||+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 43 2346889999999999999988642 111 10 124456677889999
Q ss_pred EeEEeeeecCCCCCceEEEEEEec
Q 022962 247 LLQLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
++++... ......++..++.
T Consensus 336 ~v~~~~~----~g~~~svi~~~~~ 355 (363)
T 3dp7_A 336 VEEIQDN----IGLGHSILQCRLK 355 (363)
T ss_dssp ESCCCCC----BTTTBEEEEEEEC
T ss_pred EEEEEeC----CCCCceEEEEeec
Confidence 8877532 2333556666654
No 149
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.59 E-value=9.1e-16 Score=129.17 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=81.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+..+|||||||+|.+++.++...|+.+|+|+|+|+.|++++++++..+|.. ++++ .|..+... +++||+|++.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~----~~~~DvVLa~ 122 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY----KGTYDVVFLL 122 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT----TSEEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC----CCCcChhhHh
Confidence 367999999999999999998889999999999999999999999999987 5776 55544322 3789999988
Q ss_pred C----cccHHHHHHHHccccccCeEEEEE
Q 022962 200 A----VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~----~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
. +.+.+..+..+.+.|+|||.|+-.
T Consensus 123 k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 123 KMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp TCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred hHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 4 334455566889999999999854
No 150
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=141.87 Aligned_cols=95 Identities=23% Similarity=0.314 Sum_probs=82.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||||||+|.+++..|++ ...+|+|||.|+ +++.|+++++.+|+.+ |+++++|++++..+ ++||+|+|.-
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp----e~~DvivsE~ 157 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP----EQVDAIVSEW 157 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SCEEEEECCC
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC----ccccEEEeec
Confidence 789999999999999887765 567999999996 8899999999999864 99999999998653 7899999963
Q ss_pred c-------ccHHHHHHHHccccccCeEEE
Q 022962 201 V-------AEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 201 ~-------~~~~~ll~~~~~~LkpgG~l~ 222 (289)
+ ..++.++....++|||||.++
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccccccchhhhHHHHHHhhCCCCceEC
Confidence 2 247888888899999999988
No 151
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.59 E-value=9.1e-15 Score=131.11 Aligned_cols=130 Identities=14% Similarity=0.175 Sum_probs=92.3
Q ss_pred CCCeEEEEcCCCChHHHHH----HHHCCCCEE--EEEeCChHHHHHHHHHHHHc-CCCCEEE--EeccccccCCC---Cc
Q 022962 121 SNLKLVDVGTGAGLPGLVL----AIACPDWKV--TLLESMNKRCVFLEHAVSLT-QLLNVQI--VRGRAETLGKD---VS 188 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~l----a~~~p~~~V--~~iD~s~~~l~~a~~~~~~~-~l~ni~~--~~~d~~~~~~~---~~ 188 (289)
++.+|||||||+|.++..+ +..+|+..| +|+|+|++|++.|++++... ++.++++ ..++++++... ..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 3679999999999766533 334567755 99999999999999988764 5666654 56666654310 00
Q ss_pred CCCCceEEEEcC----cccHHHHHHHHccccccCeEEEEEEcCC-c-H-------------------HHHHHHHHHHHHh
Q 022962 189 FREQYDVAVARA----VAEMRILAEYCLPLVRVGGLFVAAKGHD-P-Q-------------------EEVKNSERAVQLM 243 (289)
Q Consensus 189 ~~~~fD~V~sn~----~~~~~~ll~~~~~~LkpgG~l~~~~g~~-~-~-------------------~ei~~~~~~l~~~ 243 (289)
.+++||+|+++. +.++..+++++.++|||||++++..... . . ....++.+.++.+
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence 137899999984 5678999999999999999999854211 0 0 0123456677889
Q ss_pred CCeEeEE
Q 022962 244 GASLLQL 250 (289)
Q Consensus 244 g~~~~~~ 250 (289)
||.+...
T Consensus 212 Gf~~~~~ 218 (292)
T 2aot_A 212 GLKYECY 218 (292)
T ss_dssp TCCEEEE
T ss_pred CCceEEE
Confidence 9987653
No 152
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.59 E-value=1.6e-14 Score=137.60 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=99.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
..++.+|||+|||+|..++.+|...+ .++|+|+|+|+.+++.+++|++++|+.|+.++++|+.++... .+++||+|+
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~--~~~~FD~Il 180 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH--FSGFFDRIV 180 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH--HTTCEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh--ccccCCEEE
Confidence 34688999999999999999997654 479999999999999999999999999999999999886421 247899999
Q ss_pred EcCcc--------------------------cHHHHHHHHccccccCeEEEEEEcCC-cHHHHHHHHHHHHHhCCeEeEE
Q 022962 198 ARAVA--------------------------EMRILAEYCLPLVRVGGLFVAAKGHD-PQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 198 sn~~~--------------------------~~~~ll~~~~~~LkpgG~l~~~~g~~-~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
+++.. ....+++.+.++|||||++++..-.. ..+.-..+...++.++|++..+
T Consensus 181 ~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 181 VDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp EECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred ECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCEEEec
Confidence 97420 12378999999999999998755322 2221122334556777766554
No 153
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.59 E-value=4.7e-15 Score=125.60 Aligned_cols=100 Identities=16% Similarity=0.224 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|..++.++.. ++.+|+|+|+|+.+++.+++++...+. +++++++|+.+++.. +++||+|+++.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~---~~~fD~v~~~~ 97 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDIRKLPFK---DESMSFVYSYG 97 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCTTSCCSC---TTCEEEEEECS
T ss_pred CCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECchhhCCCC---CCceeEEEEcC
Confidence 3679999999999975555434 467999999999999999999887764 799999999887643 37899999974
Q ss_pred c------ccHHHHHHHHccccccCeEEEEEE
Q 022962 201 V------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ .+...+++++.++|||||.+++..
T Consensus 98 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 98 TIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2 467899999999999999999754
No 154
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.59 E-value=4.1e-14 Score=130.34 Aligned_cols=146 Identities=15% Similarity=0.103 Sum_probs=108.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.++.+|||||||+|.++..++..+|+.+++++|+ +.+++.+++++...++. +++++.+|+.+. . +..||+|+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~----~~~~D~v~ 254 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP-L----PRKADAII 254 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC-C----SSCEEEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC-C----CCCccEEE
Confidence 34578999999999999999999999999999999 99999999999998875 799999998752 1 13599999
Q ss_pred EcCcc------cHHHHHHHHccccccCeEEEEEEcC-Cc-----H-H----------------HHHHHHHHHHHhCCeEe
Q 022962 198 ARAVA------EMRILAEYCLPLVRVGGLFVAAKGH-DP-----Q-E----------------EVKNSERAVQLMGASLL 248 (289)
Q Consensus 198 sn~~~------~~~~ll~~~~~~LkpgG~l~~~~g~-~~-----~-~----------------ei~~~~~~l~~~g~~~~ 248 (289)
++.+- ....+++++.++|+|||++++.... .. . . ...++.+.++++||+++
T Consensus 255 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (360)
T 1tw3_A 255 LSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVE 334 (360)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEE
T ss_pred EcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEE
Confidence 87432 2358999999999999999876432 10 0 0 12345667789999998
Q ss_pred EEeeeecCCCCCceEEEEEEec
Q 022962 249 QLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 249 ~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
++.....+.......++.++|.
T Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 335 EVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEeCCCCcccCccEEEEEEeC
Confidence 8876531100112456666654
No 155
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.59 E-value=3.9e-15 Score=139.00 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=87.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHH-------HHcCC--CCEEEEeccccccCCCCc
Q 022962 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAV-------SLTQL--LNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~-------~~~~l--~ni~~~~~d~~~~~~~~~ 188 (289)
.+.++.+|||||||+|.+++.+|...+..+|+|||+|+.+++.|++++ +.+|+ .+|+++++|+.+++....
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 356789999999999999999998877778999999999999999865 34565 579999999998754211
Q ss_pred CCCCceEEEEcCc---ccHHHHHHHHccccccCeEEEEE
Q 022962 189 FREQYDVAVARAV---AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 189 ~~~~fD~V~sn~~---~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+ ..||+|++|.. .+....+.++.+.|||||+|++.
T Consensus 250 ~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 I-ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp H-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred c-CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 1 36999999964 46778888999999999999965
No 156
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.59 E-value=2.1e-14 Score=125.94 Aligned_cols=131 Identities=13% Similarity=0.163 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEecccccc-CCCCcC--CCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETL-GKDVSF--REQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~-~~~~~~--~~~fD~V 196 (289)
++.+|||+|||+|.+++.++...++.+|+|+|+|+.+++.|+++++.+++++ ++++++|+.+. ...... +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 3679999999999999999987778899999999999999999999999875 99999998762 211111 1589999
Q ss_pred EEcCc----c---------------cHHHHHHHHcccc--------------------ccCeEEEEEEcCCcHHHHHHHH
Q 022962 197 VARAV----A---------------EMRILAEYCLPLV--------------------RVGGLFVAAKGHDPQEEVKNSE 237 (289)
Q Consensus 197 ~sn~~----~---------------~~~~ll~~~~~~L--------------------kpgG~l~~~~g~~~~~ei~~~~ 237 (289)
++|.. . +...++..+.++| +++|.+++..+.... +..+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~--~~~~~ 222 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCS--LAPLK 222 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTS--HHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhH--HHHHH
Confidence 99821 0 0113344444444 455555555554333 23344
Q ss_pred HHHHHhCCeEeEEeee
Q 022962 238 RAVQLMGASLLQLCSV 253 (289)
Q Consensus 238 ~~l~~~g~~~~~~~~~ 253 (289)
+.+++.||..+++..+
T Consensus 223 ~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 223 EELRIQGVPKVTYTEF 238 (254)
T ss_dssp HHHHHTTCSEEEEEEE
T ss_pred HHHHHcCCCceEEEEE
Confidence 5667899987777654
No 157
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.59 E-value=5e-15 Score=132.08 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPD-WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAV 197 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~-~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~ 197 (289)
.++.+|||+|||+|..++.+|...++ .+|+|+|+|+.+++.++++++.+|+.|++++++|+.++.... ...++||+|+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 35789999999999999999987765 899999999999999999999999989999999998764310 0036899999
Q ss_pred EcCc----------------------ccHHHHHHHHccccccCeEEEEEEc
Q 022962 198 ARAV----------------------AEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 198 sn~~----------------------~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+++. .....+++.+.++|||||++++...
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 9831 2347899999999999999998653
No 158
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=4.5e-15 Score=131.27 Aligned_cols=130 Identities=14% Similarity=-0.007 Sum_probs=98.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChH------HHHHHHHHHHHcCC-CCEEEEecc-c--cccCCCCcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNK------RCVFLEHAVSLTQL-LNVQIVRGR-A--ETLGKDVSF 189 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~------~l~~a~~~~~~~~l-~ni~~~~~d-~--~~~~~~~~~ 189 (289)
++.+|||||||+|.++..++... |..+|+|+|+|+. +++.++++++..++ ++++++++| . ..++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~--- 119 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA--- 119 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC---
Confidence 47899999999999999999885 6689999999997 99999999988887 479999998 3 233221
Q ss_pred CCCceEEEEcC----cccHHHHHHHHccccccCeEEEEEEcCC------cH--------------------------HHH
Q 022962 190 REQYDVAVARA----VAEMRILAEYCLPLVRVGGLFVAAKGHD------PQ--------------------------EEV 233 (289)
Q Consensus 190 ~~~fD~V~sn~----~~~~~~ll~~~~~~LkpgG~l~~~~g~~------~~--------------------------~ei 233 (289)
+++||+|+++. +.+...+++.+..+++|||++++..-.. .. ...
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 199 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITP 199 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCH
T ss_pred CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCH
Confidence 37899999984 3456667777777777899999853110 00 012
Q ss_pred HHHHHHHHHhCCeEeEEeee
Q 022962 234 KNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 234 ~~~~~~l~~~g~~~~~~~~~ 253 (289)
.++.+.++++||+++++..+
T Consensus 200 ~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 200 DTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHCCCeeEEEEEe
Confidence 24556677899998887755
No 159
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.58 E-value=8.9e-15 Score=127.70 Aligned_cols=96 Identities=18% Similarity=0.336 Sum_probs=83.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|++++...+. +++++++|+.+++. +++||+|++..
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~----~~~fD~v~~~~~ 114 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF----KNEFDAVTMFFS 114 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC----CSCEEEEEECSS
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc----CCCccEEEEcCC
Confidence 679999999999999999875 67999999999999999999988876 79999999998754 36899999752
Q ss_pred ------cccHHHHHHHHccccccCeEEEEE
Q 022962 201 ------VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ------~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
..+...+++.+.++|+|||.+++.
T Consensus 115 ~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 115 TIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 135688999999999999999874
No 160
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.58 E-value=1.5e-14 Score=132.91 Aligned_cols=97 Identities=19% Similarity=0.226 Sum_probs=84.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++++|+++++.+ +++||+|+++
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~Ivs~ 138 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLP---VEKVDVIISE 138 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---CSCEEEEEEC
T ss_pred CCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCC---CCcEEEEEEc
Confidence 3779999999999999998876 556999999997 99999999999998 5799999999987543 2689999998
Q ss_pred Cc-------ccHHHHHHHHccccccCeEEE
Q 022962 200 AV-------AEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 200 ~~-------~~~~~ll~~~~~~LkpgG~l~ 222 (289)
.+ ..+..++..+.++|||||.++
T Consensus 139 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 139 WMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 52 356789999999999999997
No 161
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.58 E-value=5.3e-14 Score=130.51 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=106.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||||||+|..+..++..+|+.+++++|+ +.+++.+++++...++ ++|+++.+|+.+ +. +..||+|++
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~----p~~~D~v~~ 274 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TI----PDGADVYLI 274 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CC----CSSCSEEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CC----CCCceEEEh
Confidence 3478999999999999999999999999999999 9999999999998886 469999999973 22 237999998
Q ss_pred cCc----cc--HHHHHHHHccccccCeEEEEEEc--CC-c-H----H-------------HHHHHHHHHHHhCCeEeEEe
Q 022962 199 RAV----AE--MRILAEYCLPLVRVGGLFVAAKG--HD-P-Q----E-------------EVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 199 n~~----~~--~~~ll~~~~~~LkpgG~l~~~~g--~~-~-~----~-------------ei~~~~~~l~~~g~~~~~~~ 251 (289)
+.+ .+ ...+++++.++|+|||++++... +. . . . ...++.+.++++||+++++.
T Consensus 275 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 275 KHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 753 22 34799999999999999998642 11 0 0 0 12345667788999998886
Q ss_pred eeecCCCCCceEEEEEEe
Q 022962 252 SVESQSPFGQRTAVVCLK 269 (289)
Q Consensus 252 ~~~~~~~~~~r~lv~~~k 269 (289)
.. ..+...++.+++
T Consensus 355 ~~----~~~~~svie~~~ 368 (369)
T 3gwz_A 355 PC----GAGPVRIVEIRR 368 (369)
T ss_dssp EC----SSSSEEEEEEEE
T ss_pred EC----CCCCcEEEEEEe
Confidence 42 234455555554
No 162
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.58 E-value=2e-14 Score=125.03 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=95.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.++.. ..+|+++|+|+.+++.|+++.+..++ .+++++++|+.+.... +++||+|+++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~~ 165 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP---EGIFHAAFVD 165 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC---TTCBSEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC---CCcccEEEEC
Confidence 4789999999999999999987 78999999999999999999999887 5799999999875411 2679999997
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
.. +...+++.+.++|+|||++++..+.. +.+.++.+.++.. |...+
T Consensus 166 ~~-~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 166 VR-EPWHYLEKVHKSLMEGAPVGFLLPTA--NQVIKLLESIENY-FGNLE 211 (248)
T ss_dssp SS-CGGGGHHHHHHHBCTTCEEEEEESSH--HHHHHHHHHSTTT-EEEEE
T ss_pred Cc-CHHHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHhh-CCcce
Confidence 43 45678899999999999999987632 3344444455454 55443
No 163
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.57 E-value=4.9e-14 Score=128.59 Aligned_cols=127 Identities=18% Similarity=0.111 Sum_probs=101.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+..+|||||||+|..+..++..+|+.+++++|+ +.+++.+++++...++ ++|+++.+|+.+ +. +.+||+|+++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~----p~~~D~v~~~ 242 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PL----PAGAGGYVLS 242 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC----CCSCSEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CC----CCCCcEEEEe
Confidence 467999999999999999999999999999999 9999999999998887 479999999973 22 2379999987
Q ss_pred Cc----cc--HHHHHHHHccccccCeEEEEEEcCCcH------H-------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 200 AV----AE--MRILAEYCLPLVRVGGLFVAAKGHDPQ------E-------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 200 ~~----~~--~~~ll~~~~~~LkpgG~l~~~~g~~~~------~-------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.+ .+ ...+++++.++|+|||++++....... . ...++.+.++++||+.+++...
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 43 22 478999999999999999986532110 0 1234566788999999888643
No 164
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.57 E-value=5.3e-14 Score=129.19 Aligned_cols=139 Identities=14% Similarity=0.097 Sum_probs=107.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||||||+|.++..++..+|+.+++++|+ +.+++.+++++...++. +++++.+|+.+.... .++.||+|+++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF--EGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG--TTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc--CCCCccEEEEec
Confidence 67999999999999999999999999999999 88999999999988875 599999999876410 236799999974
Q ss_pred c----c--cHHHHHHHHccccccCeEEEEEEcC------Cc-HH-----------------HHHHHHHHHHHhCCeEeEE
Q 022962 201 V----A--EMRILAEYCLPLVRVGGLFVAAKGH------DP-QE-----------------EVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 201 ~----~--~~~~ll~~~~~~LkpgG~l~~~~g~------~~-~~-----------------ei~~~~~~l~~~g~~~~~~ 250 (289)
+ . +...+++++.++|+|||++++.... .. .. ...++.+.+++.||++++.
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 3 2 3478999999999999999986421 01 00 1234566788999998874
Q ss_pred eeeecCCCCCceEEEEEEec
Q 022962 251 CSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 251 ~~~~~~~~~~~r~lv~~~k~ 270 (289)
. .+...+++.+|.
T Consensus 337 ~-------~g~~~l~~a~kp 349 (352)
T 3mcz_A 337 S-------IGRYTLLIGQRS 349 (352)
T ss_dssp E-------ETTEEEEEEECC
T ss_pred c-------cCceEEEEEecC
Confidence 2 244566666653
No 165
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=1.8e-14 Score=132.81 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++++|+++++. +++||+|+++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~----~~~~D~Ivs~ 123 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL----PEQVDIIISE 123 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC----SSCEEEEEEC
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC----CCceeEEEEe
Confidence 3779999999999999998875 567999999996 88999999999988 579999999998754 2689999998
Q ss_pred Cc------ccHHHHHHHHccccccCeEEEEE
Q 022962 200 AV------AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~~------~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.+ ......+..+.++|||||.+++.
T Consensus 124 ~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 124 PMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 53 34567788899999999999854
No 166
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=1.1e-14 Score=126.80 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcC--CCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF--REQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~--~~~fD~V~s 198 (289)
++.+|||||||+|.++..++...+ +|+|+|+|+.+++.++++. ...+++++++|+.++.....+ ...||+|++
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEE
Confidence 478999999999999999998865 8999999999999998865 334799999999886432111 134999999
Q ss_pred cC----cc--cHHHHHHHHccccccCeEEEEEE
Q 022962 199 RA----VA--EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 199 n~----~~--~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+. +. +...+++++.++|||||++++..
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 84 23 67899999999999999977654
No 167
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.57 E-value=4.9e-14 Score=119.51 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=92.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.+++.++.. +..+|+|+|+|+.+++.++++++.+++ +++++++|+.+++ ++||+|++|.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------~~~D~v~~~~ 120 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN------SRVDIVIMNP 120 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC------CCCSEEEECC
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC------CCCCEEEEcC
Confidence 3779999999999999999876 345899999999999999999998888 8999999998863 4799999995
Q ss_pred c------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeee
Q 022962 201 V------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE 254 (289)
Q Consensus 201 ~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~ 254 (289)
. .....+++.+.+.+ ||.+++... .......+.+.+...|+.+..+....
T Consensus 121 p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~~ 176 (207)
T 1wy7_A 121 PFGSQRKHADRPFLLKAFEIS--DVVYSIHLA--KPEVRRFIEKFSWEHGFVVTHRLTTK 176 (207)
T ss_dssp CCSSSSTTTTHHHHHHHHHHC--SEEEEEEEC--CHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCccccCCchHHHHHHHHHhc--CcEEEEEeC--CcCCHHHHHHHHHHCCCeEEEEEEEe
Confidence 3 23457788888887 555443321 22333444556778998877665543
No 168
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.57 E-value=3.6e-14 Score=132.01 Aligned_cols=142 Identities=12% Similarity=0.084 Sum_probs=106.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
..++.+|||+|||+|.+++.+|...+..+|+|+|+|+.+++.|++|++.+|+ ++++++++|+.+++.. +++||+|+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~---~~~fD~Ii 291 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY---VDSVDFAI 291 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT---CSCEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc---cCCcCEEE
Confidence 3567899999999999999999876656999999999999999999999998 5799999999998643 36899999
Q ss_pred EcCc-----------cc-HHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEE
Q 022962 198 ARAV-----------AE-MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAV 265 (289)
Q Consensus 198 sn~~-----------~~-~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv 265 (289)
+|.. .. +..+++.+.++| ||.+++.... .+.+. +.+...||+..+...+. .|.-..-
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~--~~~~~---~~~~~~G~~~~~~~~~~----nG~l~~~ 360 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE--KKAIE---EAIAENGFEIIHHRVIG----HGGLMVH 360 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC--HHHHH---HHHHHTTEEEEEEEEEE----ETTEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC--HHHHH---HHHHHcCCEEEEEEEEE----cCCEEEE
Confidence 9842 11 377888888888 5666655542 23333 35568899988876553 2333444
Q ss_pred EEEecCCCC
Q 022962 266 VCLKSRRTP 274 (289)
Q Consensus 266 ~~~k~~~~p 274 (289)
++....++|
T Consensus 361 ~~~~~~~~~ 369 (373)
T 3tm4_A 361 LYVVKLEHH 369 (373)
T ss_dssp EEEEEETTC
T ss_pred EEeccCccC
Confidence 444444554
No 169
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.57 E-value=9.1e-15 Score=123.94 Aligned_cols=101 Identities=11% Similarity=0.142 Sum_probs=84.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.++..++...+. +|+|+|+|+.+++.++++... ..+++++++|+.+++.. +++||+|+++.
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~---~~~fD~v~~~~ 115 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFP---SASFDVVLEKG 115 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSC---SSCEEEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCC---CCcccEEEECc
Confidence 4779999999999999999876433 999999999999999997664 34799999999887543 36899999874
Q ss_pred c-------------------ccHHHHHHHHccccccCeEEEEEEcC
Q 022962 201 V-------------------AEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 201 ~-------------------~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
. .+...+++++.++|+|||.+++....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 116 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred chhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 2 24589999999999999999987643
No 170
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.57 E-value=3.2e-15 Score=139.31 Aligned_cols=97 Identities=22% Similarity=0.274 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.+++. +..+|+|+|+| .+++.|+++++.+++.+ ++++++|++++..+ ++||+|+++
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~Iv~~ 136 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP----EKVDVIISE 136 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS----SCEEEEEEC
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC----CcceEEEEc
Confidence 4789999999999999999876 44599999999 99999999999999865 99999999988643 789999997
Q ss_pred Cc-------ccHHHHHHHHccccccCeEEEE
Q 022962 200 AV-------AEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 200 ~~-------~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
.+ ..+..+++.+.++|||||.+++
T Consensus 137 ~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 137 WMGYFLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp CCBTTBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred ChhhcccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 42 3478899999999999999985
No 171
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.57 E-value=3.2e-14 Score=129.52 Aligned_cols=146 Identities=11% Similarity=0.064 Sum_probs=104.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--CC--CCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--QL--LNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--~l--~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++.... ++ .+++++++|+.+.... .+++||+|+
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--HKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH--CTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh--cCCCceEEE
Confidence 57999999999999999987667789999999999999999987653 22 4799999999874211 136899999
Q ss_pred EcCccc-------H-HHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCC-CceEEEE
Q 022962 198 ARAVAE-------M-RILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSPF-GQRTAVV 266 (289)
Q Consensus 198 sn~~~~-------~-~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~-~~r~lv~ 266 (289)
++.... + ..+++.+.++|+|||.+++..+. ...+.+..+.+.++.. |..++......|.-. +.+..++
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~v~~~~~~iP~~~~g~~g~~~ 265 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKI-FPAVTYAQSIVSTYPSGSMGYLI 265 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH-CSEEEEEEEECTTSGGGEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH-CCcceEEEEEecCcCCCceEEEE
Confidence 986321 1 68899999999999999987643 2345566666666665 444444444345433 3445666
Q ss_pred EEec
Q 022962 267 CLKS 270 (289)
Q Consensus 267 ~~k~ 270 (289)
+.|.
T Consensus 266 ask~ 269 (314)
T 2b2c_A 266 CAKN 269 (314)
T ss_dssp EESS
T ss_pred EeCC
Confidence 6654
No 172
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=1.6e-14 Score=123.26 Aligned_cols=104 Identities=20% Similarity=0.224 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||||||+|.++..++... +..+|+++|+|+.+++.++++....++++++++++|+..... ..++||+|++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~v~~ 152 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE---PLAPYDRIYT 152 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG---GGCCEEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC---CCCCeeEEEE
Confidence 357899999999999999999876 558999999999999999999999888889999999865322 1368999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEcCC
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKGHD 228 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g~~ 228 (289)
+.... .+.+.+.++|+|||++++..+..
T Consensus 153 ~~~~~--~~~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 153 TAAGP--KIPEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SSBBS--SCCHHHHHTEEEEEEEEEEESSS
T ss_pred CCchH--HHHHHHHHHcCCCcEEEEEECCC
Confidence 85432 12257788999999999987653
No 173
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.56 E-value=1.6e-14 Score=134.87 Aligned_cols=101 Identities=18% Similarity=0.267 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|+++++.++++ ++++++|+.+.... +++||+|++|.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~~---~~~fD~Ii~np 306 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALTE---EARFDIIVTNP 306 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSCT---TCCEEEEEECC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcccc---CCCeEEEEECC
Confidence 4779999999999999999976 579999999999999999999999874 99999999887543 36899999983
Q ss_pred ---------cccHHHHHHHHccccccCeEEEEEEcC
Q 022962 201 ---------VAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 201 ---------~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
......+++++.++|+|||.+++....
T Consensus 307 p~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 307 PFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred chhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 235678999999999999999997654
No 174
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.56 E-value=1e-14 Score=125.57 Aligned_cols=102 Identities=21% Similarity=0.266 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-----CCCEEEEEeCChHHHHHHHHHHHHcC-----CCCEEEEeccccccC----CC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-----PDWKVTLLESMNKRCVFLEHAVSLTQ-----LLNVQIVRGRAETLG----KD 186 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-----p~~~V~~iD~s~~~l~~a~~~~~~~~-----l~ni~~~~~d~~~~~----~~ 186 (289)
++.+|||||||+|..+..++... |..+|+++|+++.+++.|+++.+..+ ..+++++++|+.+.. ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 47899999999999999999875 46799999999999999999999887 568999999998743 21
Q ss_pred CcCCCCceEEEEcCcccHHHHHHHHccccccCeEEEEEEcC
Q 022962 187 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 187 ~~~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
.++||+|+++.... .+++.+.++|+|||++++..+.
T Consensus 160 ---~~~fD~I~~~~~~~--~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 160 ---LGLFDAIHVGASAS--ELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp ---HCCEEEEEECSBBS--SCCHHHHHHEEEEEEEEEEEEE
T ss_pred ---CCCcCEEEECCchH--HHHHHHHHhcCCCcEEEEEEcc
Confidence 36899999986543 3567788899999999988764
No 175
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=1.9e-14 Score=128.80 Aligned_cols=163 Identities=13% Similarity=0.035 Sum_probs=98.8
Q ss_pred cCcCceeecChHHHHHhhhhhccccCCCCcccccc--cc--CCCCCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeC-
Q 022962 79 RKMNLTAVKDVNEVMERHIDDSLAIIPPIKNSYTS--HC--DSSCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLES- 153 (289)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~sl~~~~~~~~~~~~--~~--~~~~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~- 153 (289)
.+.++.++.+..++|+..+.. .++.+ .. .....++.+|||||||+|.+++.++.. +..+|+|+|+
T Consensus 42 ~~~~~~~i~g~~~~~g~~~~~---------~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s 111 (281)
T 3bzb_A 42 QCSVQVQTTQEHPLWTSHVWS---------GARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYP 111 (281)
T ss_dssp CCEEEEECC-----------C---------HHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECS
T ss_pred cCCeEEEECCCCCCCCceeec---------HHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCC
Confidence 344777888877777643321 11100 00 001124779999999999999998875 4459999999
Q ss_pred ChHHHHHHHHHH-----HHcCCC-----CEEEEeccccccCCCCc---CCCCceEEEEcC----cccHHHHHHHHccccc
Q 022962 154 MNKRCVFLEHAV-----SLTQLL-----NVQIVRGRAETLGKDVS---FREQYDVAVARA----VAEMRILAEYCLPLVR 216 (289)
Q Consensus 154 s~~~l~~a~~~~-----~~~~l~-----ni~~~~~d~~~~~~~~~---~~~~fD~V~sn~----~~~~~~ll~~~~~~Lk 216 (289)
|+.+++.|++|+ +.+++. +++++..++.+...... .+++||+|++.. ......+++.+.++|+
T Consensus 112 ~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 112 DPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLA 191 (281)
T ss_dssp CHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred CHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhc
Confidence 899999999999 556654 68888666544211000 136899999853 4467899999999999
Q ss_pred ---c--CeEEEEEEcCCc---HHHHHHHHHHHHHhC-CeEeEEe
Q 022962 217 ---V--GGLFVAAKGHDP---QEEVKNSERAVQLMG-ASLLQLC 251 (289)
Q Consensus 217 ---p--gG~l~~~~g~~~---~~ei~~~~~~l~~~g-~~~~~~~ 251 (289)
| ||.+++...... ......+.+.+++.| |.+..+.
T Consensus 192 ~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 192 LPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp CTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEE
T ss_pred ccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEec
Confidence 9 999876544322 122344556677899 9887763
No 176
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.56 E-value=4.8e-14 Score=126.43 Aligned_cols=146 Identities=13% Similarity=0.049 Sum_probs=106.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcC----CCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ----LLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~----l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++...++ ..+++++++|+.+.... .+++||+|+
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~Ii 156 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--VTNTYDVII 156 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH--CCSCEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh--CCCCceEEE
Confidence 579999999999999999876667899999999999999999876542 35799999999875321 136899999
Q ss_pred EcCcc------cH--HHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCc-eEEEE
Q 022962 198 ARAVA------EM--RILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSPFGQ-RTAVV 266 (289)
Q Consensus 198 sn~~~------~~--~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~-r~lv~ 266 (289)
++... .+ ..+++.+.++|+|||.+++..+. ...+.+..+.+.++.. |..++......|.-.++ ...++
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~vP~y~~g~~g~~~ 235 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEYANISIPTYPCGCIGILC 235 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEEEEEECTTSGGGEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH-CCceEEEEEEcCCcCCCcEEEEE
Confidence 97522 22 78999999999999999986542 3445556666666654 55555544444543334 44555
Q ss_pred EEec
Q 022962 267 CLKS 270 (289)
Q Consensus 267 ~~k~ 270 (289)
+.+.
T Consensus 236 ~s~~ 239 (283)
T 2i7c_A 236 CSKT 239 (283)
T ss_dssp EESS
T ss_pred EeCC
Confidence 5544
No 177
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.56 E-value=9e-15 Score=127.11 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=87.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcC-C--CCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSF-R--EQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~-~--~~fD~V 196 (289)
+.+|||||||+|..++.+|...+ +.+|+++|+|+.+++.|+++++..++. +++++++|+.+....... + ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 67999999999999999998876 689999999999999999999998885 599999998653111001 1 679999
Q ss_pred EEcCc-ccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAV-AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~-~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
++++. .++..+++.+.++|+|||.+++.
T Consensus 153 ~~d~~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 153 FIDADKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 99864 57889999999999999999874
No 178
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.56 E-value=5.7e-14 Score=118.42 Aligned_cols=94 Identities=14% Similarity=0.224 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC--CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC------------
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP--DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD------------ 186 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p--~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~------------ 186 (289)
++.+|||||||+|.++..++...+ ..+|+|+|+|+.+ ...+++++++|+.+....
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 467999999999999999998887 6899999999831 245799999999876400
Q ss_pred ----------CcCCCCceEEEEcCcc--------cH-------HHHHHHHccccccCeEEEEEE
Q 022962 187 ----------VSFREQYDVAVARAVA--------EM-------RILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 187 ----------~~~~~~fD~V~sn~~~--------~~-------~~ll~~~~~~LkpgG~l~~~~ 225 (289)
...+++||+|+++... +. ..+++.+.++|||||.|++..
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 0013689999998421 11 247889999999999999854
No 179
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=1.3e-14 Score=126.67 Aligned_cols=103 Identities=19% Similarity=0.230 Sum_probs=87.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCC--c--CCCCceE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDV--S--FREQYDV 195 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~--~--~~~~fD~ 195 (289)
+.+|||||||+|..++.+|...| +.+|+++|+|+.+++.|+++++..|+. +++++++|+.+..... . ..++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 67999999999999999999876 789999999999999999999999986 5999999997642110 0 0368999
Q ss_pred EEEcC-cccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARA-VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~-~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|++.+ ...+..+++.+.++|+|||.+++.
T Consensus 151 I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 151 GFVDADKPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99986 446789999999999999999874
No 180
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=3.3e-14 Score=129.16 Aligned_cols=121 Identities=19% Similarity=0.183 Sum_probs=93.8
Q ss_pred CeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCcc
Q 022962 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAVA 202 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~~ 202 (289)
.+|||||||+|.++..+++.+|+.+|++||+|+.+++.|+++.......+++++++|+.++... ..+++||+|+++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES-FTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT-CCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh-ccCCCCCEEEECCCC
Confidence 4899999999999999998889999999999999999999976544345799999999876321 113689999997422
Q ss_pred ------c--HHHHHHHHccccccCeEEEEEEcCC-cHHHHHHHHHHHHHhC
Q 022962 203 ------E--MRILAEYCLPLVRVGGLFVAAKGHD-PQEEVKNSERAVQLMG 244 (289)
Q Consensus 203 ------~--~~~ll~~~~~~LkpgG~l~~~~g~~-~~~ei~~~~~~l~~~g 244 (289)
. ...+++.+.++|+|||.|++..+.. ....+..+.+.++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF 220 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVF 220 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHC
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHC
Confidence 1 2789999999999999999876532 2234455556666653
No 181
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.56 E-value=1e-14 Score=127.03 Aligned_cols=104 Identities=21% Similarity=0.242 Sum_probs=87.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCC-----------c
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDV-----------S 188 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~-----------~ 188 (289)
+.+|||||||+|..++.++...+ +.+|+++|+++.+++.|+++++..++.+ ++++++|+.+..... .
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 67999999999999999999876 6899999999999999999999988865 999999987631100 0
Q ss_pred C--C-CCceEEEEcC-cccHHHHHHHHccccccCeEEEEEE
Q 022962 189 F--R-EQYDVAVARA-VAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 189 ~--~-~~fD~V~sn~-~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+ + ++||+|+++. ...+..+++.+.++|+|||++++..
T Consensus 141 f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 1 5799999985 4567899999999999999999854
No 182
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.55 E-value=8.6e-15 Score=126.12 Aligned_cols=103 Identities=25% Similarity=0.275 Sum_probs=87.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCC---CCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFR---EQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~---~~fD~V 196 (289)
+.+|||||||+|..++.++...+ +.+|+++|+|+.+++.|+++++..++ ++++++++|+.+........ ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 67999999999999999998766 78999999999999999999999988 47999999987642110001 579999
Q ss_pred EEcC-cccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARA-VAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~-~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
++++ ...+..+++.+.++|+|||.+++.
T Consensus 150 ~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 150 VVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9986 456789999999999999999874
No 183
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.55 E-value=1.1e-13 Score=131.18 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=105.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC-CcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD-VSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~-~~~~~~fD~V~s 198 (289)
.++.+|||+|||+|.+++.+|.. ..+|+|+|+|+.+++.|++|++.++++|++++++|+.+.... ...+++||+|++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE
Confidence 45789999999999999999976 679999999999999999999999998999999999874221 011357999999
Q ss_pred cCc-ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeee-cCCCCCceEEEEEEe
Q 022962 199 RAV-AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE-SQSPFGQRTAVVCLK 269 (289)
Q Consensus 199 n~~-~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~-~~~~~~~r~lv~~~k 269 (289)
|.. .....+++.+.. ++|++.+++...+ ..+..-...+.+.|+.+.++..++ +|....-..+++++|
T Consensus 363 dPPr~g~~~~~~~l~~-~~p~~ivyvsc~p---~tlard~~~l~~~Gy~~~~~~~~d~Fp~t~HvE~v~ll~r 431 (433)
T 1uwv_A 363 DPARAGAAGVMQQIIK-LEPIRIVYVSCNP---ATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSR 431 (433)
T ss_dssp CCCTTCCHHHHHHHHH-HCCSEEEEEESCH---HHHHHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC
T ss_pred CCCCccHHHHHHHHHh-cCCCeEEEEECCh---HHHHhhHHHHHHCCcEEEEEEEeccCCCCCeEEEEEEEEE
Confidence 952 223355555443 7889888775432 222222345667899999988776 454444555666654
No 184
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=9.9e-16 Score=133.17 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=82.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|+++++.+++ .+++++++|+.++.. +++||+|+++.
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~~~ 152 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS----FLKADVVFLSP 152 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----GCCCSEEEECC
T ss_pred CCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----cCCCCEEEECC
Confidence 789999999999999999976 48999999999999999999999998 589999999998763 37899999985
Q ss_pred c----ccHHHHHHHHccccccCeEEEE
Q 022962 201 V----AEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 201 ~----~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
. ......+.++.++|+|||.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 153 PWGGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCSSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CcCCcchhhhHHHHHHhhcCCcceeHH
Confidence 2 3334466678899999999764
No 185
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.55 E-value=4.3e-14 Score=132.11 Aligned_cols=108 Identities=13% Similarity=0.100 Sum_probs=88.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC--CEEEEeccccccCCCC-cCCCCceEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL--NVQIVRGRAETLGKDV-SFREQYDVA 196 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~--ni~~~~~d~~~~~~~~-~~~~~fD~V 196 (289)
.++.+|||+|||+|.+++.+|.. ...+|+|+|+|+.+++.|++|++.++++ +++++++|+.++.... ...++||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 45789999999999999999964 3459999999999999999999999987 8999999998742110 012589999
Q ss_pred EEcCc-------------ccHHHHHHHHccccccCeEEEEEEcCC
Q 022962 197 VARAV-------------AEMRILAEYCLPLVRVGGLFVAAKGHD 228 (289)
Q Consensus 197 ~sn~~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~~ 228 (289)
+++.. ..+..+++.+.++|+|||.+++.....
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99731 245678889999999999999887543
No 186
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.55 E-value=1.5e-14 Score=131.05 Aligned_cols=104 Identities=6% Similarity=-0.023 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC------CEEEEeccc------cccCCCCc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL------NVQIVRGRA------ETLGKDVS 188 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~------ni~~~~~d~------~~~~~~~~ 188 (289)
++.+|||||||+|.....++.. ...+|+|+|+|+.|++.|++.+...+.. ++++.+.|+ +++... .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~-~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV-F 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT-C
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc-c
Confidence 3789999999999766555543 4579999999999999999988776643 267888887 333211 1
Q ss_pred CCCCceEEEEcCc-------ccHHHHHHHHccccccCeEEEEEEc
Q 022962 189 FREQYDVAVARAV-------AEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 189 ~~~~fD~V~sn~~-------~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
.+++||+|+|... .+...+++++.++|||||+|++...
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1368999998631 3568999999999999999987653
No 187
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.55 E-value=6.9e-14 Score=128.34 Aligned_cols=148 Identities=11% Similarity=0.084 Sum_probs=104.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--CC--CCEEEEeccccccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--QL--LNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--~l--~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
++.+|||||||+|.++..+++..+..+|++||+|+.+++.|+++...+ ++ .+++++++|+.++... ..+++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~-~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-AAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-SCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh-ccCCCccEE
Confidence 467999999999999999998767789999999999999999987653 33 4799999999875211 013689999
Q ss_pred EEcCcc-----c---HHHHHHHHccccccCeEEEEEEc--CCcHHHHHHHHHHHHHhCCe-EeEEeeeecCCCC-CceEE
Q 022962 197 VARAVA-----E---MRILAEYCLPLVRVGGLFVAAKG--HDPQEEVKNSERAVQLMGAS-LLQLCSVESQSPF-GQRTA 264 (289)
Q Consensus 197 ~sn~~~-----~---~~~ll~~~~~~LkpgG~l~~~~g--~~~~~ei~~~~~~l~~~g~~-~~~~~~~~~~~~~-~~r~l 264 (289)
+++... . ...+++.+.++|+|||.+++..+ ......+..+.+.++.. |. +........|.-. +....
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~~~~~~~~vP~y~~g~~gf 277 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREI-FKGSVNYAWTSVPTYPSGVIGF 277 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH-CSSCEEEEEEECTTSGGGEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHh-CccccceEEEeCCcccCCceEE
Confidence 998531 1 47899999999999999998533 23344455555555543 33 2322212223322 45556
Q ss_pred EEEEec
Q 022962 265 VVCLKS 270 (289)
Q Consensus 265 v~~~k~ 270 (289)
+++.+.
T Consensus 278 ~~as~~ 283 (334)
T 1xj5_A 278 MLCSTE 283 (334)
T ss_dssp EEEECS
T ss_pred EEcccC
Confidence 666654
No 188
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.55 E-value=2e-14 Score=123.69 Aligned_cols=102 Identities=21% Similarity=0.230 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcC-----CCCEEEEeccccccCCCCcCCCCce
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQ-----LLNVQIVRGRAETLGKDVSFREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~-----l~ni~~~~~d~~~~~~~~~~~~~fD 194 (289)
++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++...+ .++++++++|+.+.... .++||
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD 153 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE---EAPYD 153 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG---GCCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc---CCCcC
Confidence 47899999999999999999774 55799999999999999999998865 45899999999765332 36899
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEEEcC
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
+|+++... ..+++.+.++|||||++++..+.
T Consensus 154 ~i~~~~~~--~~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 154 AIHVGAAA--PVVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEECSBB--SSCCHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCch--HHHHHHHHHhcCCCcEEEEEEec
Confidence 99998643 23456788999999999998764
No 189
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.54 E-value=5.2e-14 Score=120.32 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=94.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||+|||+|.++..++.. + .+|+|+|+|+.+++.++++. .+++++|+.+...+ ..+++||+|+++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~-~~~~~fD~v~~~~ 101 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMP-YEEEQFDCVIFGD 101 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCC-SCTTCEEEEEEES
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCC-CCCCccCEEEECC
Confidence 3779999999999999999876 4 89999999999998887642 36788998864321 1136899999974
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEcCCc---------------------------HHHHHHHHHHHHHhCCeEeE
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKGHDP---------------------------QEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~---------------------------~~ei~~~~~~l~~~g~~~~~ 249 (289)
+.+...+++++.++|+|||.+++...... .-...++.+.++.+||++++
T Consensus 102 ~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 181 (230)
T 3cc8_A 102 VLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISK 181 (230)
T ss_dssp CGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEE
Confidence 34678999999999999999998643210 01234456677799999988
Q ss_pred Eeeee
Q 022962 250 LCSVE 254 (289)
Q Consensus 250 ~~~~~ 254 (289)
+..+.
T Consensus 182 ~~~~~ 186 (230)
T 3cc8_A 182 VDRVY 186 (230)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 87664
No 190
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=1.9e-14 Score=130.84 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=85.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.+++.++...+ ..+|+|+|+|+.+++.|+++++..++++++++++|+.+.... .++||+|+++
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~---~~~fD~Iv~~ 151 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE---FSPYDVIFVT 151 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---GCCEEEEEEC
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc---CCCeEEEEEc
Confidence 478999999999999999998766 478999999999999999999999998899999999875432 3689999998
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcC
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
.... .+.+.+.++|||||++++..+.
T Consensus 152 ~~~~--~~~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 152 VGVD--EVPETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SBBS--CCCHHHHHHEEEEEEEEEEBCB
T ss_pred CCHH--HHHHHHHHhcCCCcEEEEEECC
Confidence 6432 1125677899999999987643
No 191
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.54 E-value=9.1e-14 Score=125.95 Aligned_cols=146 Identities=12% Similarity=0.052 Sum_probs=103.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH--cC--CCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL--TQ--LLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~--~~--l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++..+..+|++||+|+.+++.|+++... .+ ..+++++++|+.++... .+++||+|+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--~~~~fD~Ii 173 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ--NQDAFDVII 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT--CSSCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh--CCCCceEEE
Confidence 6799999999999999998776778999999999999999998765 23 24799999999774211 136899999
Q ss_pred EcCccc--------HHHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCCC-CceEEEE
Q 022962 198 ARAVAE--------MRILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSPF-GQRTAVV 266 (289)
Q Consensus 198 sn~~~~--------~~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~-~~r~lv~ 266 (289)
++.... ...+++.+.++|+|||.+++..+. .....+..+.+.++.. |..++......|.-. +....++
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~vP~~~~g~~g~~~ 252 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSL-FPVVAYAYCTIPTYPSGQIGFML 252 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHH-CSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHh-CCCceeEEEEeccccCcceEEEE
Confidence 985431 357899999999999999987633 2334445555555554 444444433334322 4455666
Q ss_pred EEec
Q 022962 267 CLKS 270 (289)
Q Consensus 267 ~~k~ 270 (289)
+.+.
T Consensus 253 as~~ 256 (304)
T 2o07_A 253 CSKN 256 (304)
T ss_dssp EESS
T ss_pred EeCC
Confidence 6654
No 192
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.54 E-value=1.5e-14 Score=132.91 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=87.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
.+.+|||+|||+|.+++.++...|..+|+++|+|+.+++.+++++..+++. ++++.+|+.+.. +++||+|++|.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~-----~~~fD~Iv~~~ 269 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV-----KGRFDMIISNP 269 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC-----CSCEEEEEECC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc-----cCCeeEEEECC
Confidence 367999999999999999999988889999999999999999999998874 778888887643 36899999984
Q ss_pred c---------ccHHHHHHHHccccccCeEEEEEEcC
Q 022962 201 V---------AEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 201 ~---------~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
. .....+++++.++|||||.+++....
T Consensus 270 ~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 270 PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 2 24688999999999999999987643
No 193
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.54 E-value=6.1e-14 Score=127.90 Aligned_cols=136 Identities=15% Similarity=0.124 Sum_probs=104.6
Q ss_pred CeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
.+|||||||+|..+..++..+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +. +++||+|+++.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~----~~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV----PSNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC----CSSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC----CCCCCEEEEchh
Confidence 7999999999999999999999999999999 9999999998877665 469999999976 32 257999998753
Q ss_pred c------cHHHHHHHHccccccCeEEEEEEcC-----CcH-H----------------HHHHHHHHHHHhCCeEeEEeee
Q 022962 202 A------EMRILAEYCLPLVRVGGLFVAAKGH-----DPQ-E----------------EVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 202 ~------~~~~ll~~~~~~LkpgG~l~~~~g~-----~~~-~----------------ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
- ....+++.+.++|+|||++++.... ... . ...++.+.++++||+.+++...
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEEC
Confidence 2 2348999999999999999987421 100 0 1234566778999998887643
Q ss_pred ecCCCCCceEEEEEEe
Q 022962 254 ESQSPFGQRTAVVCLK 269 (289)
Q Consensus 254 ~~~~~~~~r~lv~~~k 269 (289)
.+...++.++|
T Consensus 323 -----~~~~~~i~~~~ 333 (334)
T 2ip2_A 323 -----PMETRMIVAAR 333 (334)
T ss_dssp -----TTTEEEEEEEE
T ss_pred -----CCCCEEEEEEe
Confidence 13345555554
No 194
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.54 E-value=6.7e-14 Score=114.32 Aligned_cols=132 Identities=13% Similarity=0.173 Sum_probs=90.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccC--------CCCcCCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG--------KDVSFRE 191 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~--------~~~~~~~ 191 (289)
++.+|||+|||+|.++..++..+ ++.+|+|+|+|+ +++ ..+++++++|+.+.+ .. ++
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~---~~ 87 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVG---DS 87 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHT---TC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCC---CC
Confidence 47799999999999999999884 668999999999 643 257999999998764 22 36
Q ss_pred CceEEEEcCcc----cH-----------HHHHHHHccccccCeEEEEEEc-CCcHHHHHHHHHHHHHhCCeEeEEeeeec
Q 022962 192 QYDVAVARAVA----EM-----------RILAEYCLPLVRVGGLFVAAKG-HDPQEEVKNSERAVQLMGASLLQLCSVES 255 (289)
Q Consensus 192 ~fD~V~sn~~~----~~-----------~~ll~~~~~~LkpgG~l~~~~g-~~~~~ei~~~~~~l~~~g~~~~~~~~~~~ 255 (289)
+||+|+++... .. ..+++.+.++|+|||.+++... .....++ .+.+... |..+++..-..
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~ 163 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEY---LREIRSL-FTKVKVRKPDS 163 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHH---HHHHHHH-EEEEEEECCTT
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHH---HHHHHHh-hhhEEeecCCc
Confidence 89999997421 12 6889999999999999998543 2333333 3344443 55555432222
Q ss_pred CCCCCceEEEEEEec
Q 022962 256 QSPFGQRTAVVCLKS 270 (289)
Q Consensus 256 ~~~~~~r~lv~~~k~ 270 (289)
........+++.++.
T Consensus 164 ~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 164 SRARSREVYIVATGR 178 (180)
T ss_dssp SCTTCCEEEEEEEEE
T ss_pred ccccCceEEEEEccC
Confidence 222334555555544
No 195
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.54 E-value=5.1e-14 Score=131.36 Aligned_cols=125 Identities=21% Similarity=0.178 Sum_probs=97.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~sn 199 (289)
++.+|||+|||+|.+++.+|.. ..+|+|+|+|+.+++.|++|++.++++|++++++|+.++.... ..+++||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 4679999999999999999987 6799999999999999999999999988999999998763210 013689999998
Q ss_pred Cc-------------ccHHHHHHHHccccccCeEEEEEEcCC--cHHHHHH-HHHHHHHhCCeE
Q 022962 200 AV-------------AEMRILAEYCLPLVRVGGLFVAAKGHD--PQEEVKN-SERAVQLMGASL 247 (289)
Q Consensus 200 ~~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~~--~~~ei~~-~~~~l~~~g~~~ 247 (289)
.. ..+..++..+.++|+|||.+++..... ..+.... +.+.+...|..+
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 42 356789999999999999999876432 2222332 334556666544
No 196
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.54 E-value=3.7e-15 Score=130.69 Aligned_cols=103 Identities=13% Similarity=0.010 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCChHHHHHHHH--CCCCEEEEEeCChHHHHHHHHHHHHc---CCCC------------------------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA--CPDWKVTLLESMNKRCVFLEHAVSLT---QLLN------------------------ 172 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~--~p~~~V~~iD~s~~~l~~a~~~~~~~---~l~n------------------------ 172 (289)
+.+|||+|||+|.+++.++.. .+..+|+|+|+|+.+++.|++++... ++.+
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 579999999999999999987 67789999999999999999988766 4432
Q ss_pred --EE-------------EEeccccccCCCC--cCCCCceEEEEcCc-------------ccHHHHHHHHccccccCeEEE
Q 022962 173 --VQ-------------IVRGRAETLGKDV--SFREQYDVAVARAV-------------AEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 173 --i~-------------~~~~d~~~~~~~~--~~~~~fD~V~sn~~-------------~~~~~ll~~~~~~LkpgG~l~ 222 (289)
++ ++++|+.+..... ...++||+|++|.. ..+..+++.+.++|+|||+++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 66 9999987743100 01248999999831 235689999999999999999
Q ss_pred EE
Q 022962 223 AA 224 (289)
Q Consensus 223 ~~ 224 (289)
+.
T Consensus 212 ~~ 213 (250)
T 1o9g_A 212 VT 213 (250)
T ss_dssp EE
T ss_pred Ee
Confidence 83
No 197
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=2.8e-14 Score=134.85 Aligned_cols=106 Identities=19% Similarity=0.161 Sum_probs=85.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHH-------HHHHHHcC--CCCEEEEecccccc--CCCC
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFL-------EHAVSLTQ--LLNVQIVRGRAETL--GKDV 187 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a-------~~~~~~~~--l~ni~~~~~d~~~~--~~~~ 187 (289)
+.++.+|||||||+|.+++.+|...+..+|+|||+|+.+++.| +++++..| ..|++++++|.... ...
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~- 318 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA- 318 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc-
Confidence 4468899999999999999999877777999999999999999 88888888 56899998754321 100
Q ss_pred cCCCCceEEEEcC---cccHHHHHHHHccccccCeEEEEEE
Q 022962 188 SFREQYDVAVARA---VAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 188 ~~~~~fD~V~sn~---~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
...++||+|+++. ..++...++++.+.|||||++++..
T Consensus 319 ~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 319 ELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp HHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 0125799999973 2467788899999999999999753
No 198
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=1.4e-13 Score=128.83 Aligned_cols=126 Identities=17% Similarity=0.086 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+++.+|||+|||+|.+++.+|.. +.+|+++|+|+.+++.|++|++.++++ .++.++|+.++... ..+.||+|+++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~--~~~~fD~Ii~d 287 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRG--LEGPFHHVLLD 287 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHT--CCCCEEEEEEC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHH--hcCCCCEEEEC
Confidence 34889999999999999999975 456999999999999999999999986 35679999875321 12449999998
Q ss_pred Cc-------------ccHHHHHHHHccccccCeEEEEEEcC--CcHHHHH-HHHHHHHHhCCeEeEE
Q 022962 200 AV-------------AEMRILAEYCLPLVRVGGLFVAAKGH--DPQEEVK-NSERAVQLMGASLLQL 250 (289)
Q Consensus 200 ~~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~-~~~~~l~~~g~~~~~~ 250 (289)
+. ..+..+++.+.++|+|||.+++.... ...+++. .+.+.+...|.....+
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 53 25678999999999999999865532 2233433 3445566677654433
No 199
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.53 E-value=8.9e-14 Score=130.28 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=100.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-C-CEEEEeccccccCCCC-cCCCCceEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-L-NVQIVRGRAETLGKDV-SFREQYDVA 196 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~-ni~~~~~d~~~~~~~~-~~~~~fD~V 196 (289)
.++.+|||+|||+|.+++.+|.. ...+|+|+|+|+.+++.|++|++.+++ + +++++++|+.++.... ...++||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 35789999999999999999975 356999999999999999999999998 6 8999999998763210 012589999
Q ss_pred EEcCc-------------ccHHHHHHHHccccccCeEEEEEEcCC--cHHHHHH-HHHHHHHhCCeEeEE
Q 022962 197 VARAV-------------AEMRILAEYCLPLVRVGGLFVAAKGHD--PQEEVKN-SERAVQLMGASLLQL 250 (289)
Q Consensus 197 ~sn~~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~~--~~~ei~~-~~~~l~~~g~~~~~~ 250 (289)
+++.. ..+..++..+.+.|+|||.+++..... ..++..+ +.+.+...|..+..+
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 99842 467889999999999999999876432 2233333 334667778654433
No 200
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.53 E-value=4.1e-14 Score=126.31 Aligned_cols=102 Identities=22% Similarity=0.302 Sum_probs=83.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC----CCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL----LNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l----~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|.++..++.. +.+|+|+|+|+.+++.|++++...+. .++.+..+|+.+++.....+++||+|+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 679999999999999999876 56999999999999999998755432 368899999988751100137899999
Q ss_pred Ec-C----ccc-------HHHHHHHHccccccCeEEEEEE
Q 022962 198 AR-A----VAE-------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 198 sn-~----~~~-------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
|+ . +.+ +..+++++.++|||||++++..
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 96 2 234 8899999999999999999765
No 201
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.53 E-value=1.9e-14 Score=127.63 Aligned_cols=97 Identities=15% Similarity=0.090 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC--CCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK--DVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~--~~~~~~~fD~V~s 198 (289)
++.+|||||||+|.+++.+|.. +.+|+|+|+|+.|++.|++++... +++.++.++.. ....+++||+|++
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIPKELAGHFDFVLN 116 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCCGGGTTCCSEEEE
T ss_pred CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeecccccccccCCCccEEEE
Confidence 4789999999999999999975 679999999999999999987654 22334444322 1122468999999
Q ss_pred cCc------ccHHHHHHHHccccccCeEEEEEEc
Q 022962 199 RAV------AEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 199 n~~------~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+.+ .+...+++.+.++| |||++++...
T Consensus 117 ~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 117 DRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 853 35677899999999 9999998654
No 202
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.53 E-value=4.8e-14 Score=120.90 Aligned_cols=116 Identities=16% Similarity=0.233 Sum_probs=91.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||||||+|.++..++.. +|+|+|+.+++.++++ +++++++|+.+++.. +++||+|+++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~---~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-------GVFVLKGTAENLPLK---DESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSC---TTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-------CCEEEEcccccCCCC---CCCeeEEEEcch
Confidence 569999999999998887632 9999999999998875 688999999887543 36899999985
Q ss_pred ---cccHHHHHHHHccccccCeEEEEEEcCCcH---------------------HHHHHHHHHHHHhCCeEeEEeee
Q 022962 201 ---VAEMRILAEYCLPLVRVGGLFVAAKGHDPQ---------------------EEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 201 ---~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~---------------------~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+.+...+++++.++|+|||.+++....... -...++.+.++.+||+++++...
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 356789999999999999999986432110 01244566778999999887755
No 203
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.53 E-value=5.1e-14 Score=128.75 Aligned_cols=96 Identities=18% Similarity=0.229 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||||||+|.+++.+++. +..+|+|+|+| .+++.|+++++.+++. +++++++|+++++.+ .++||+|+++.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~Ivs~~ 113 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLP---FPKVDIIISEW 113 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---SSCEEEEEECC
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCC---CCcccEEEEeC
Confidence 679999999999999998875 55699999999 5999999999999885 599999999987543 26899999984
Q ss_pred c-------ccHHHHHHHHccccccCeEEE
Q 022962 201 V-------AEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 201 ~-------~~~~~ll~~~~~~LkpgG~l~ 222 (289)
+ ..+..++..+.++|+|||.++
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 114 MGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred chhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2 346789999999999999997
No 204
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.52 E-value=2e-13 Score=130.17 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=96.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPD-WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~-~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.++.+|||+|||+|..++.+|...++ ++|+|+|+|+.+++.+++|++++|+. +.++++|+.++... .+++||+|++
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~--~~~~FD~Il~ 176 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA--FGTYFHRVLL 176 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH--HCSCEEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh--ccccCCEEEE
Confidence 45889999999999999999988654 79999999999999999999999998 99999999886521 2378999998
Q ss_pred cCcc--------------------------cHHHHHHHHccccccCeEEEEEEcCCcHHH-HHHHHHHHHHh-CCeEeEE
Q 022962 199 RAVA--------------------------EMRILAEYCLPLVRVGGLFVAAKGHDPQEE-VKNSERAVQLM-GASLLQL 250 (289)
Q Consensus 199 n~~~--------------------------~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e-i~~~~~~l~~~-g~~~~~~ 250 (289)
++.. ....+++.+.++|||||+|++..-....+| -..+...++.+ +|++..+
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDA 256 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEECC
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCCcEEEec
Confidence 6310 127899999999999999987543221111 12223344455 5665543
No 205
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.52 E-value=3.2e-14 Score=120.90 Aligned_cols=92 Identities=21% Similarity=0.203 Sum_probs=78.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDW-KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~-~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. .+++++++|+.+++.. +++||+|+++.
T Consensus 37 ~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~---~~~fD~v~~~~ 103 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFP---GESFDVVLLFT 103 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSC---SSCEEEEEEES
T ss_pred CCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCC---CCcEEEEEEcC
Confidence 679999999999977665 45 9999999999999998865 4789999999887643 36899999984
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEc
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+.+...+++++.++|||||.+++...
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 45788999999999999999998653
No 206
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.52 E-value=5.1e-14 Score=122.22 Aligned_cols=103 Identities=20% Similarity=0.371 Sum_probs=83.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
..++.+|||||||+|.++..++...+ .+|+++|+++.+++.|+++.+..++.+++++.+|+.. ... ...+||+|++
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~--~~~~fD~Ii~ 164 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-GFP--PKAPYDVIIV 164 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CCG--GGCCEEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-CCC--CCCCccEEEE
Confidence 34578999999999999999998876 8999999999999999999999998889999999732 221 1246999999
Q ss_pred cCcccHHHHHHHHccccccCeEEEEEEcC
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
+.... .+.+.+.+.|+|||++++..+.
T Consensus 165 ~~~~~--~~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 165 TAGAP--KIPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CSBBS--SCCHHHHHTEEEEEEEEEEECS
T ss_pred CCcHH--HHHHHHHHhcCCCcEEEEEEec
Confidence 85432 1234677899999999998764
No 207
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.51 E-value=1.3e-13 Score=116.40 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=83.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||+|||+|.+++.++.. +..+|+|+|+|+.+++.|++++. +++++++|+.+++ ++||+|++|..
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~------~~~D~v~~~~p 119 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS------GKYDTWIMNPP 119 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC------CCEEEEEECCC
T ss_pred CCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC------CCeeEEEECCC
Confidence 679999999999999999876 55689999999999999998765 6899999998863 57999999953
Q ss_pred ------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 202 ------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 202 ------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
.....+++.+.+.+ |+ +++......... +.+.+...| .+..+...
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~--g~-~~~~~~~~~~~~---~~~~~~~~g-~~~~~~~~ 170 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS--MW-IYSIGNAKARDF---LRREFSARG-DVFREEKV 170 (200)
T ss_dssp C-------CHHHHHHHHHHE--EE-EEEEEEGGGHHH---HHHHHHHHE-EEEEEEEE
T ss_pred chhccCchhHHHHHHHHHhc--Cc-EEEEEcCchHHH---HHHHHHHCC-CEEEEEEE
Confidence 12346788888877 44 554444333333 344556777 65555433
No 208
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.51 E-value=3.3e-13 Score=128.54 Aligned_cols=131 Identities=21% Similarity=0.130 Sum_probs=99.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCC-CCceE
Q 022962 118 SCNSNLKLVDVGTGAGLPGLVLAIACPD-WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFR-EQYDV 195 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~l~la~~~p~-~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~-~~fD~ 195 (289)
...++.+|||+|||+|..++.++...++ ++|+|+|+|+.+++.++++++.+|++|++++++|+.++... +. ++||+
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~--~~~~~fD~ 333 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI--IGEEVADK 333 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS--SCSSCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh--hccCCCCE
Confidence 3456889999999999999999988766 89999999999999999999999998999999999886531 22 67999
Q ss_pred EEEcCcc----------c----------------HHHHHHHHccccccCeEEEEEEcCC-cHHHHHHHHHHHHHh-CCeE
Q 022962 196 AVARAVA----------E----------------MRILAEYCLPLVRVGGLFVAAKGHD-PQEEVKNSERAVQLM-GASL 247 (289)
Q Consensus 196 V~sn~~~----------~----------------~~~ll~~~~~~LkpgG~l~~~~g~~-~~~ei~~~~~~l~~~-g~~~ 247 (289)
|++++.. + ...+++.+.++|||||++++..-.. ..+.-..+...++.+ +|.+
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~ 413 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKL 413 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEE
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEE
Confidence 9986210 1 1678999999999999999765322 222111223345565 6766
Q ss_pred eEE
Q 022962 248 LQL 250 (289)
Q Consensus 248 ~~~ 250 (289)
..+
T Consensus 414 ~~~ 416 (450)
T 2yxl_A 414 VPL 416 (450)
T ss_dssp CCC
T ss_pred eec
Confidence 543
No 209
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.51 E-value=1.5e-13 Score=115.19 Aligned_cols=95 Identities=15% Similarity=0.136 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCC---------CEEEEEeCChHHHHHHHHHHHHcCCCCEEEE-eccccccCCC----
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPD---------WKVTLLESMNKRCVFLEHAVSLTQLLNVQIV-RGRAETLGKD---- 186 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~---------~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~-~~d~~~~~~~---- 186 (289)
++.+|||+|||+|.+++.++...+. .+|+|+|+|+.+ .+.+++++ ++|+.+....
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 4789999999999999999988764 799999999842 24578999 8988764210
Q ss_pred -CcCCCCceEEEEcCcc--------cH-------HHHHHHHccccccCeEEEEEEc
Q 022962 187 -VSFREQYDVAVARAVA--------EM-------RILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 187 -~~~~~~fD~V~sn~~~--------~~-------~~ll~~~~~~LkpgG~l~~~~g 226 (289)
...+++||+|+|+... +. ..+++++.++|||||+|++...
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 0012579999996411 11 5789999999999999998754
No 210
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.51 E-value=2.7e-13 Score=126.99 Aligned_cols=126 Identities=19% Similarity=0.133 Sum_probs=96.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCC-cCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDV-SFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~-~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.+|.. +..+|+|+|+|+.+++.|++|++.++++ +++++++|+.++.... ...++||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5789999999999999999975 4569999999999999999999999987 8999999998753210 01368999999
Q ss_pred cCc-------------ccHHHHHHHHccccccCeEEEEEEcCC--cHHHHHHH-HHHHHHhCCeE
Q 022962 199 RAV-------------AEMRILAEYCLPLVRVGGLFVAAKGHD--PQEEVKNS-ERAVQLMGASL 247 (289)
Q Consensus 199 n~~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~~--~~~ei~~~-~~~l~~~g~~~ 247 (289)
+.. ..+..++..+.++|+|||.+++..... ..++..++ .+.+...|..+
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 842 356789999999999999988775432 23333332 23455566543
No 211
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.51 E-value=6.5e-14 Score=120.71 Aligned_cols=98 Identities=22% Similarity=0.271 Sum_probs=81.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++... .+|+|+|+|+.+++.++++....+ +++++++|+.+... ..++||+|+++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~---~~~~fD~v~~~~ 142 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE---EEKPYDRVVVWA 142 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG---GGCCEEEEEESS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc---cCCCccEEEECC
Confidence 47899999999999999999874 799999999999999999988776 89999999987322 136899999986
Q ss_pred cccHHHHHHHHccccccCeEEEEEEcC
Q 022962 201 VAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 201 ~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
... .+.+.+.++|+|||++++..+.
T Consensus 143 ~~~--~~~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 143 TAP--TLLCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp BBS--SCCHHHHHTEEEEEEEEEEECS
T ss_pred cHH--HHHHHHHHHcCCCcEEEEEEcC
Confidence 432 1234678899999999998764
No 212
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.51 E-value=1.3e-13 Score=124.70 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=84.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc-------CCCCEEEEeccccccCCCCc---CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT-------QLLNVQIVRGRAETLGKDVS---FRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~-------~l~ni~~~~~d~~~~~~~~~---~~~ 191 (289)
+.+|||||||+|..+..++. .+..+|+|+|+|+.+++.++++.... +..+++++++|+++++.... .++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 67999999999999998886 46789999999999999999987764 34479999999998751101 135
Q ss_pred CceEEEEcCc--------ccHHHHHHHHccccccCeEEEEEEc
Q 022962 192 QYDVAVARAV--------AEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 192 ~fD~V~sn~~--------~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+||+|+|+.. .+...+++++.++|||||.+++...
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 8999999742 2356999999999999999998654
No 213
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.50 E-value=4.3e-15 Score=129.63 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=89.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEE-eccccccCCCCcCCC-CceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV-RGRAETLGKDVSFRE-QYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~-~~d~~~~~~~~~~~~-~fD~V~sn 199 (289)
+.+|||||||+|.++..+++. +..+|+|||+|+.|++.++++.. ++... ..++..+... .... .||.+.+.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~d~~~~D 110 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE-----RVVVMEQFNFRNAVLA-DFEQGRPSFTSID 110 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT-----TEEEECSCCGGGCCGG-GCCSCCCSEEEEC
T ss_pred CCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc-----cccccccceEEEeCHh-HcCcCCCCEEEEE
Confidence 679999999999999999876 44699999999999998766432 22211 1122211100 0111 24444433
Q ss_pred -CcccHHHHHHHHccccccCeEEEEEEcC----------------C---cHHHHHHHHHHHHHhCCeEeEEeeeecCCCC
Q 022962 200 -AVAEMRILAEYCLPLVRVGGLFVAAKGH----------------D---PQEEVKNSERAVQLMGASLLQLCSVESQSPF 259 (289)
Q Consensus 200 -~~~~~~~ll~~~~~~LkpgG~l~~~~g~----------------~---~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~ 259 (289)
.+..+..+++++.++|||||.+++...+ + ......++.+.++..||.+..+..-....+.
T Consensus 111 ~v~~~l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~ 190 (232)
T 3opn_A 111 VSFISLDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGA 190 (232)
T ss_dssp CSSSCGGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTT
T ss_pred EEhhhHHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCC
Confidence 2334578999999999999999986311 0 1123455677788999998887654333333
Q ss_pred C-ceEEEEEEec
Q 022962 260 G-QRTAVVCLKS 270 (289)
Q Consensus 260 ~-~r~lv~~~k~ 270 (289)
+ ...++.++|.
T Consensus 191 gn~e~l~~~~~~ 202 (232)
T 3opn_A 191 GNVEFLVHLLKD 202 (232)
T ss_dssp TBCCEEEEEEES
T ss_pred CCHHHHHHHhhc
Confidence 3 3445566654
No 214
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.50 E-value=6.4e-14 Score=140.23 Aligned_cols=125 Identities=11% Similarity=0.137 Sum_probs=97.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCC--CEEEEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLL--NVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~--ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||+|||+|.+++.+|.. ...+|++||+|+.+++.|++|++.++++ +++++++|+.++... ..++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~--~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE--ANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH--CCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh--cCCCccEEEE
Confidence 4789999999999999998864 4567999999999999999999999986 799999999884221 1368999999
Q ss_pred cCc---------------ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 199 RAV---------------AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 199 n~~---------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
++. ..+..+++.+.++|+|||+|++.........- .+.+...|++...+.
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---~~~l~~~g~~~~~i~ 680 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---LDGLAKLGLKAQEIT 680 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---HHHHHHTTEEEEECT
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---HHHHHHcCCceeeee
Confidence 841 25678899999999999999987764211111 224557888754443
No 215
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.50 E-value=3.7e-14 Score=132.22 Aligned_cols=102 Identities=14% Similarity=0.153 Sum_probs=89.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc---------------CCCCEEEEeccccccCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT---------------QLLNVQIVRGRAETLGKD 186 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~---------------~l~ni~~~~~d~~~~~~~ 186 (289)
+.+|||+|||+|..++.+|...++.+|+++|+|+++++.+++|++.+ ++++++++++|+.++...
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 67999999999999999998877789999999999999999999999 887799999999876431
Q ss_pred CcCCCCceEEEEcCcccHHHHHHHHccccccCeEEEEEE
Q 022962 187 VSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 187 ~~~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..++||+|+.++......+++.+.+.|++||.+++..
T Consensus 128 --~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 --RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp --STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1357999999876666789999999999999888753
No 216
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.50 E-value=3.8e-14 Score=122.30 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCC------CCEEEEEeCChHHHHHHHHHHHHcC-----CCCEEEEeccccccCCCCc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACP------DWKVTLLESMNKRCVFLEHAVSLTQ-----LLNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p------~~~V~~iD~s~~~l~~a~~~~~~~~-----l~ni~~~~~d~~~~~~~~~ 188 (289)
.++.+|||||||+|..+..++...+ ..+|+++|+++.+++.++++++..+ ..+++++++|+.+....
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 160 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-- 160 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG--
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc--
Confidence 3478999999999999999998654 3699999999999999999988876 56899999999873211
Q ss_pred CCCCceEEEEcCcccHHHHHHHHccccccCeEEEEEEcC
Q 022962 189 FREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGH 227 (289)
Q Consensus 189 ~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~ 227 (289)
.++||+|+++.... .+.+.+.+.|||||++++..+.
T Consensus 161 -~~~fD~I~~~~~~~--~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 161 -NAPYNAIHVGAAAP--DTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp -GCSEEEEEECSCBS--SCCHHHHHTEEEEEEEEEEESC
T ss_pred -CCCccEEEECCchH--HHHHHHHHHhcCCCEEEEEEec
Confidence 26899999986432 2446778899999999998764
No 217
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.50 E-value=1.5e-13 Score=122.00 Aligned_cols=138 Identities=8% Similarity=-0.028 Sum_probs=100.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH----cCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL----TQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~----~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+.+|||||||+|..+..+++. + .+|+++|+|+.+++.|+++... ..-++++++.+|..++. ++||+|+
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------~~fD~Ii 144 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------KKYDLIF 144 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------CCEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------hhCCEEE
Confidence 579999999999999888876 7 8999999999999999886432 22347999999988753 5799999
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEEEcCC--cHHHHHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEec
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAAKGHD--PQEEVKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~~--~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
++...+ ..+++.+.+.|+|||.+++..+.. ..+.+..+.+.++.. |..........|. .+.+..+++.|.
T Consensus 145 ~d~~dp-~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~~~~~~~vP~-~g~~~~~~as~~ 216 (262)
T 2cmg_A 145 CLQEPD-IHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGV-FSVAMPFVAPLRI-LSNKGYIYASFK 216 (262)
T ss_dssp ESSCCC-HHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTT-CSEEEEECCTTCT-TCCEEEEEEESS
T ss_pred ECCCCh-HHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHh-CCceEEEEEccCC-CcccEEEEeeCC
Confidence 986443 458999999999999999865432 334555555555554 5544443222344 556666666654
No 218
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.49 E-value=8.4e-14 Score=125.13 Aligned_cols=143 Identities=13% Similarity=-0.011 Sum_probs=96.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEE-EeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQI-VRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~-~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||||.++..+++. +..+|+|||+|+.|++.+.++ . .++.. ...++..+........+||+|+++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchhhCCCCCCCEEEEE
Confidence 3679999999999999888865 567999999999999875431 1 23333 234555543321112349999987
Q ss_pred -CcccHHHHHHHHccccccCeEEEEEEc--------------CC-----cHHHHHHHHHHHHHhCCeEeEEeeeecCCCC
Q 022962 200 -AVAEMRILAEYCLPLVRVGGLFVAAKG--------------HD-----PQEEVKNSERAVQLMGASLLQLCSVESQSPF 259 (289)
Q Consensus 200 -~~~~~~~ll~~~~~~LkpgG~l~~~~g--------------~~-----~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~~ 259 (289)
.+..+..++.++.++|+|||.+++... .- +...+.++...+..+||.+..+..-..+.+.
T Consensus 159 ~sf~sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~ 238 (291)
T 3hp7_A 159 VSFISLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGH 238 (291)
T ss_dssp CSSSCGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGG
T ss_pred eeHhhHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
Confidence 455778999999999999999998621 10 1123455667788999998887643333344
Q ss_pred CceE-EEEEEe
Q 022962 260 GQRT-AVVCLK 269 (289)
Q Consensus 260 ~~r~-lv~~~k 269 (289)
|-.. ++.+++
T Consensus 239 gn~e~l~~~~~ 249 (291)
T 3hp7_A 239 GNIEFLAHLEK 249 (291)
T ss_dssp GCCCEEEEEEE
T ss_pred cCHHHHHHhhh
Confidence 4433 444544
No 219
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.49 E-value=3.5e-13 Score=113.89 Aligned_cols=114 Identities=16% Similarity=0.131 Sum_probs=79.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC----cCC----CC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV----SFR----EQ 192 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~----~~~----~~ 192 (289)
++.+|||+|||+|.++..++.. ..+|+|||+++.. ...+++++++|+.+..... .+. ++
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 4789999999999999999876 7899999999742 3458999999998753110 011 48
Q ss_pred ceEEEEcCcc---------------cHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEE
Q 022962 193 YDVAVARAVA---------------EMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 193 fD~V~sn~~~---------------~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
||+|+|+... ....+++.+.++|||||.|++..-.... ...+...++. .|..+++
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~--~~~~~~~l~~-~F~~v~~ 161 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM--TNDFIAIWRK-NFSSYKI 161 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH--HHHHHHHHGG-GEEEEEE
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC--HHHHHHHHHH-hcCEEEE
Confidence 9999997411 1357788999999999999975532222 2233444433 4554444
No 220
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.48 E-value=4.7e-13 Score=123.53 Aligned_cols=140 Identities=16% Similarity=0.125 Sum_probs=105.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
....+|+|||||+|..++.+++.+|+.+++..|. +.+++.+++++...+.++|+++.+|+.+.+. ..+|+|++.
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~-----~~~D~~~~~ 251 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL-----PEADLYILA 251 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-----CCCSEEEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-----CCceEEEee
Confidence 3467999999999999999999999999999997 7899999988766666789999999876432 358999987
Q ss_pred Cc------ccHHHHHHHHccccccCeEEEEEEcC---C---c-HHH----------------HHHHHHHHHHhCCeEeEE
Q 022962 200 AV------AEMRILAEYCLPLVRVGGLFVAAKGH---D---P-QEE----------------VKNSERAVQLMGASLLQL 250 (289)
Q Consensus 200 ~~------~~~~~ll~~~~~~LkpgG~l~~~~g~---~---~-~~e----------------i~~~~~~l~~~g~~~~~~ 250 (289)
.+ .....+|+++++.|+|||++++.... + . ... ..++.+.++++||+.+++
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred eecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 42 23468899999999999999986521 1 1 111 234566788999998888
Q ss_pred eeeecCCCCCceEEEEEEec
Q 022962 251 CSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 251 ~~~~~~~~~~~r~lv~~~k~ 270 (289)
... .+...+|+.+|.
T Consensus 332 ~~~-----~~~~~~i~ArKg 346 (353)
T 4a6d_A 332 KKT-----GAIYDAILARKG 346 (353)
T ss_dssp ECC-----SSSCEEEEEECC
T ss_pred EEc-----CCceEEEEEEec
Confidence 632 344566766653
No 221
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.48 E-value=2.6e-13 Score=126.03 Aligned_cols=141 Identities=17% Similarity=0.099 Sum_probs=100.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcC------------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF------------ 189 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~------------ 189 (289)
+.+|||+|||+|.+++.+|.. ..+|+|+|+|+.+++.|++|++.++++|++++++|++++......
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 578999999999999999864 569999999999999999999999998999999999875321000
Q ss_pred -CCCceEEEEcCcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeee-cCCCCCceEEEEE
Q 022962 190 -REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE-SQSPFGQRTAVVC 267 (289)
Q Consensus 190 -~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~-~~~~~~~r~lv~~ 267 (289)
+.+||+|+++.... .+.+.+.+.|+++|.+++..- +...-..++. .+.. |+.+.++..++ +|....-..++++
T Consensus 292 ~~~~fD~Vv~dPPr~--g~~~~~~~~l~~~g~ivyvsc-~p~t~ard~~-~l~~-~y~~~~~~~~D~FP~T~HvE~v~ll 366 (369)
T 3bt7_A 292 KSYQCETIFVDPPRS--GLDSETEKMVQAYPRILYISC-NPETLCKNLE-TLSQ-THKVERLALFDQFPYTHHMQCGVLL 366 (369)
T ss_dssp GGCCEEEEEECCCTT--CCCHHHHHHHTTSSEEEEEES-CHHHHHHHHH-HHHH-HEEEEEEEEECCSTTSSCCEEEEEE
T ss_pred ccCCCCEEEECcCcc--ccHHHHHHHHhCCCEEEEEEC-CHHHHHHHHH-HHhh-CcEEEEEEeeccCCCCCcEEEEEEE
Confidence 03799999985321 122334455668888876653 3332233332 3332 68888888886 4655555666666
Q ss_pred Ee
Q 022962 268 LK 269 (289)
Q Consensus 268 ~k 269 (289)
+|
T Consensus 367 ~r 368 (369)
T 3bt7_A 367 TA 368 (369)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 222
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.48 E-value=5.1e-14 Score=122.93 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=78.6
Q ss_pred CCeEEEEcCCCChHHHHHHHH----CCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc---CCCCcCCCCce
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA----CPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL---GKDVSFREQYD 194 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~----~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~---~~~~~~~~~fD 194 (289)
+.+|||||||+|..++.+|.. .|+++|+|||+|+.+++.|+ ... .+|+++++|+.+. +.. ...+||
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~l~~~--~~~~fD 154 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTTFEHL--REMAHP 154 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGGGGGG--SSSCSS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHHHHhh--ccCCCC
Confidence 569999999999999999987 67899999999999988887 222 5799999999874 321 123799
Q ss_pred EEEEcCc-ccHHHHHHHHcc-ccccCeEEEEE
Q 022962 195 VAVARAV-AEMRILAEYCLP-LVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~-~~~~~ll~~~~~-~LkpgG~l~~~ 224 (289)
+|++++. .++..+++++.+ +|||||++++.
T Consensus 155 ~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 155 LIFIDNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred EEEECCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 9998743 367889999997 99999999984
No 223
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.48 E-value=6.2e-14 Score=123.71 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=79.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||||||+|.++..++...++.+|+|+|+|+.+++.|+++. .++.++.+|+++++.. +++||+|+++..
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~---~~~fD~v~~~~~ 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFS---DTSMDAIIRIYA 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBC---TTCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCC---CCceeEEEEeCC
Confidence 67999999999999999998877889999999999999988753 4688999999887643 368999998754
Q ss_pred ccHHHHHHHHccccccCeEEEEEEc
Q 022962 202 AEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 202 ~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
. ..++++.++|||||++++...
T Consensus 158 ~---~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 158 P---CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp C---CCHHHHHHHEEEEEEEEEEEE
T ss_pred h---hhHHHHHHhcCCCcEEEEEEc
Confidence 3 357888999999999998764
No 224
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.47 E-value=7.9e-14 Score=131.02 Aligned_cols=139 Identities=12% Similarity=0.083 Sum_probs=98.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEE--EEeccccccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQ--IVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~--~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.|+++ +..... +...+.++++.. +++||+|++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~---~~~fD~I~~ 177 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT---EGPANVIYA 177 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH---HCCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC---CCCEEEEEE
Confidence 4789999999999999998865 56999999999999988774 443221 223444444322 378999999
Q ss_pred cC----cccHHHHHHHHccccccCeEEEEEEcCC-----------------cHHHHHHHHHHHHHhCCeEeEEeeeecCC
Q 022962 199 RA----VAEMRILAEYCLPLVRVGGLFVAAKGHD-----------------PQEEVKNSERAVQLMGASLLQLCSVESQS 257 (289)
Q Consensus 199 n~----~~~~~~ll~~~~~~LkpgG~l~~~~g~~-----------------~~~ei~~~~~~l~~~g~~~~~~~~~~~~~ 257 (289)
+. +.++..+++++.++|||||++++..... ..-....+.+.++.+||+++++..+. .
T Consensus 178 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~--~ 255 (416)
T 4e2x_A 178 ANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLP--V 255 (416)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEEC--G
T ss_pred CChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEcc--C
Confidence 85 4578999999999999999999875320 00012345667789999999887652 2
Q ss_pred CCCceEEEEEEecC
Q 022962 258 PFGQRTAVVCLKSR 271 (289)
Q Consensus 258 ~~~~r~lv~~~k~~ 271 (289)
.+....+++.+..
T Consensus 256 -~~g~l~~~~~~~~ 268 (416)
T 4e2x_A 256 -HGGEVRYTLARQG 268 (416)
T ss_dssp -GGSEEEEEEEETT
T ss_pred -CCCEEEEEEEeCC
Confidence 2444455555543
No 225
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.47 E-value=1.8e-13 Score=131.19 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=87.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||+|||+|..++.+|...+ .++|+|+|+|+.+++.+++|++++|+.|++++++|+.++... .+++||.|+++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~--~~~~fD~Il~D 194 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA--VPEMFDAILLD 194 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH--STTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh--ccccCCEEEEC
Confidence 588999999999999999998764 589999999999999999999999998999999999886431 23689999996
Q ss_pred Ccc--------------------------cHHHHHHHHccccccCeEEEEEEc
Q 022962 200 AVA--------------------------EMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 200 ~~~--------------------------~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+.. ....+++.+.++|||||++++...
T Consensus 195 ~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 195 APCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 310 024789999999999999997653
No 226
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.47 E-value=7.3e-14 Score=130.58 Aligned_cols=102 Identities=12% Similarity=0.122 Sum_probs=88.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHHHHcCCCC--EEEEeccccccCC-CCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPD-WKVTLLESMNKRCVFLEHAVSLTQLLN--VQIVRGRAETLGK-DVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~-~~V~~iD~s~~~l~~a~~~~~~~~l~n--i~~~~~d~~~~~~-~~~~~~~fD~V~ 197 (289)
+.+|||++||+|.+++.+|...++ .+|+++|+|+.+++.+++|++.+++++ ++++++|+.++.. . ..++||+|+
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--~~~~fD~V~ 130 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--WGFGFDYVD 130 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC--CSSCEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh--hCCCCcEEE
Confidence 779999999999999999987544 689999999999999999999999976 9999999987532 2 135799999
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+++......+++.+.+.|++||.+++..
T Consensus 131 lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 9986656779999999999999988765
No 227
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.46 E-value=2.1e-13 Score=119.97 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=78.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++.. .+ ++++|+.+++.. +++||+|++..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~---~~~fD~v~~~~~ 123 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFP---SGAFEAVLALGD 123 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSC---TTCEEEEEECSS
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCC---CCCEEEEEEcch
Confidence 679999999999999998865 5799999999999999988643 23 788999887643 37899999974
Q ss_pred ----cccHHHHHHHHccccccCeEEEEEEc
Q 022962 201 ----VAEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 201 ----~~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
..+...+++++.++|||||.+++...
T Consensus 124 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 124 VLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 24578999999999999999998653
No 228
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.46 E-value=4.4e-13 Score=123.19 Aligned_cols=142 Identities=10% Similarity=0.068 Sum_probs=101.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCC-----CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPD-----WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~-----~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
+.+|||+|||+|.+++.++...+. .+|+|+|+++.+++.|+.++...|+ ++.++++|..+... .++||+|
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~~----~~~fD~I 205 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANLL----VDPVDVV 205 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCCC----CCCEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCccc----cCCccEE
Confidence 679999999999999998877543 7899999999999999999998888 78999999866322 3689999
Q ss_pred EEcCc----c-----------------cH-HHHHHHHccccccCeEEEEEE-----cCCcHHHHHHHHHHHHHhCCeEeE
Q 022962 197 VARAV----A-----------------EM-RILAEYCLPLVRVGGLFVAAK-----GHDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 197 ~sn~~----~-----------------~~-~~ll~~~~~~LkpgG~l~~~~-----g~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
++|.. . +. ..+++.+.+.|+|||++++.. +.....++ .+.+.+.|+. ..
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~i---r~~l~~~~~~-~~ 281 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKV---DKFIKKNGHI-EG 281 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHH---HHHHHHHEEE-EE
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHH---HHHHHhCCeE-EE
Confidence 99943 0 01 258999999999999999887 33444444 3445566652 22
Q ss_pred Eeeee---cCCCCCceEEEEEEecCC
Q 022962 250 LCSVE---SQSPFGQRTAVVCLKSRR 272 (289)
Q Consensus 250 ~~~~~---~~~~~~~r~lv~~~k~~~ 272 (289)
+..+. +........+++++|.++
T Consensus 282 ii~lp~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 282 IIKLPETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp EEECCGGGSCC-CCCEEEEEEEECCT
T ss_pred eeeCChhhccCCCCceEEEEEECCCC
Confidence 22221 112223445666776543
No 229
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.46 E-value=6.4e-13 Score=118.54 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=82.7
Q ss_pred CCeEEEEcCCC---ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---------CCcC
Q 022962 122 NLKLVDVGTGA---GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---------DVSF 189 (289)
Q Consensus 122 ~~~VLDiGcG~---G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---------~~~~ 189 (289)
..+|||||||+ |..+..++...|+.+|+++|+|+.|++.|++++.. ..+++++++|+.+... ...+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 46999999999 98877777778899999999999999999998743 2479999999976420 0011
Q ss_pred CCCceEEEEcCc----cc--HHHHHHHHccccccCeEEEEEEc
Q 022962 190 REQYDVAVARAV----AE--MRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 190 ~~~fD~V~sn~~----~~--~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
++||+|+++.+ .+ ...+++++.++|+|||+|++...
T Consensus 156 -~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 156 -SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp -TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred -CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 47999999852 23 78999999999999999998764
No 230
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.45 E-value=1.3e-13 Score=123.10 Aligned_cols=103 Identities=16% Similarity=0.164 Sum_probs=79.4
Q ss_pred CCeEEEEcCCCCh----HHHHHHHHCC----CCEEEEEeCChHHHHHHHHHHH--------------H---------cC-
Q 022962 122 NLKLVDVGTGAGL----PGLVLAIACP----DWKVTLLESMNKRCVFLEHAVS--------------L---------TQ- 169 (289)
Q Consensus 122 ~~~VLDiGcG~G~----~~l~la~~~p----~~~V~~iD~s~~~l~~a~~~~~--------------~---------~~- 169 (289)
+.+|||+|||||. +++.++...+ +.+|+|+|+|+.|++.|++++- + .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5699999999998 6666776544 4699999999999999998641 0 01
Q ss_pred --C-----CCEEEEeccccccCCCCcCCCCceEEEEcCcc------cHHHHHHHHccccccCeEEEEEEc
Q 022962 170 --L-----LNVQIVRGRAETLGKDVSFREQYDVAVARAVA------EMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 170 --l-----~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~~------~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+ ++|+|.++|+.+.+.+ ..++||+|+|+.+- ....+++.+.+.|+|||+|++..+
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~--~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYN--VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCC--CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred eeechhhcccCeEEecccCCCCCC--cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 0 2699999999874321 13689999998542 347999999999999999998544
No 231
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.45 E-value=1.6e-12 Score=123.12 Aligned_cols=106 Identities=13% Similarity=0.163 Sum_probs=87.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
..++.+|||+|||+|..++.++...++++|+|+|+|+.+++.++++++.+|+ +++++++|+.++... ..+++||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~-~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQW-CGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHH-HTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhh-cccCCCCEEEE
Confidence 4568899999999999999999988778999999999999999999999998 588999999876421 01267999998
Q ss_pred cCcc----------c----------------HHHHHHHHccccccCeEEEEEEc
Q 022962 199 RAVA----------E----------------MRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 199 n~~~----------~----------------~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
++.. + ...+++.+.++|||||++++...
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 6310 1 15889999999999999998653
No 232
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.44 E-value=2.1e-12 Score=122.10 Aligned_cols=131 Identities=10% Similarity=0.116 Sum_probs=96.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
.++.+|||+|||+|.+++.+|.. ..+|+|+|+|+.+++.|++|++.++++ ++++++|++++.. .+||+|+++
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~-----~~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV-----KGFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-----TTCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-----cCCCEEEEc
Confidence 45789999999999999999975 569999999999999999999999987 9999999998643 379999998
Q ss_pred Ccc-c-HHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeee-cCCCCCceEEE
Q 022962 200 AVA-E-MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVE-SQSPFGQRTAV 265 (289)
Q Consensus 200 ~~~-~-~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~-~~~~~~~r~lv 265 (289)
... . .+.+++.+. .|+|+|.+++..++ ..-..++ ....+.+.++..++ +|....-..++
T Consensus 361 PPr~g~~~~~~~~l~-~l~p~givyvsc~p--~tlarDl----~~l~y~l~~~~~~DmFP~T~HvE~v~ 422 (425)
T 2jjq_A 361 PPRAGLHPRLVKRLN-REKPGVIVYVSCNP--ETFARDV----KMLDYRIDEIVALDMFPHTPHVELVA 422 (425)
T ss_dssp CCTTCSCHHHHHHHH-HHCCSEEEEEESCH--HHHHHHH----HHSSCCEEEEEEECCSTTSSCCEEEE
T ss_pred CCccchHHHHHHHHH-hcCCCcEEEEECCh--HHHHhHH----hhCeEEEEEEEEECcCCCCceEEEEE
Confidence 532 2 234555554 48999999886532 2222222 22227788888776 34433333333
No 233
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.41 E-value=7.5e-13 Score=132.24 Aligned_cols=101 Identities=17% Similarity=0.127 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHH------cCCCCEEEEeccccccCCCCcCCCCc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSL------TQLLNVQIVRGRAETLGKDVSFREQY 193 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~------~~l~ni~~~~~d~~~~~~~~~~~~~f 193 (289)
++.+|||||||+|.+++.++... +..+|+|||+|+.|++.|+++++. .++.+++++++|+.+++.. .++|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~---d~sF 797 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR---LHDV 797 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT---SCSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc---cCCe
Confidence 47899999999999999999876 457999999999999999986653 3566899999999998654 3789
Q ss_pred eEEEEcCc----cc--HHHHHHHHccccccCeEEEEEE
Q 022962 194 DVAVARAV----AE--MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 194 D~V~sn~~----~~--~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
|+|+++.+ .+ ...+++++.++|||| .+++..
T Consensus 798 DlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 798 DIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp CEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred eEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99999853 22 346899999999999 665543
No 234
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.40 E-value=9.9e-13 Score=120.86 Aligned_cols=125 Identities=17% Similarity=0.191 Sum_probs=91.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
++++.+|||||||+|..+..++..+|+.+++++|++ .++. +++++..++ ++|+++.+|+.+ + .+ +||+|+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~----~p-~~D~v~ 252 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-E----VP-HADVHV 252 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-C----CC-CCSEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-C----CC-CCcEEE
Confidence 345789999999999999999999999999999994 4433 333333333 369999999962 1 12 799999
Q ss_pred EcCc----ccH--HHHHHHHccccccCeEEEEEEcC---C---cHH----------------HHHHHHHHHHHhCCeEeE
Q 022962 198 ARAV----AEM--RILAEYCLPLVRVGGLFVAAKGH---D---PQE----------------EVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 198 sn~~----~~~--~~ll~~~~~~LkpgG~l~~~~g~---~---~~~----------------ei~~~~~~l~~~g~~~~~ 249 (289)
++.+ .+. ..+++++.++|||||++++.... . ... ...++.+.++++||+.++
T Consensus 253 ~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 253 LKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred EehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 8742 233 69999999999999999986421 1 000 124456778899999888
Q ss_pred Eee
Q 022962 250 LCS 252 (289)
Q Consensus 250 ~~~ 252 (289)
+..
T Consensus 333 ~~~ 335 (348)
T 3lst_A 333 VVG 335 (348)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
No 235
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.40 E-value=1.8e-12 Score=120.22 Aligned_cols=121 Identities=15% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
.+..+|||||||+|.++..++..+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .. |+|+++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p----~~-D~v~~~ 268 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-GVP----KG-DAIFIK 268 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCC----CC-SEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-CCC----CC-CEEEEe
Confidence 3468999999999999999999999999999999 888776653 2479999999986 332 23 999987
Q ss_pred Ccc------cHHHHHHHHccccccCeEEEEEEcC---C---c-HH------H--------------HHHHHHHHHHhCCe
Q 022962 200 AVA------EMRILAEYCLPLVRVGGLFVAAKGH---D---P-QE------E--------------VKNSERAVQLMGAS 246 (289)
Q Consensus 200 ~~~------~~~~ll~~~~~~LkpgG~l~~~~g~---~---~-~~------e--------------i~~~~~~l~~~g~~ 246 (289)
.+- +...++++++++|+|||++++.... . . .. + ..++.+.++++||+
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~ 348 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFR 348 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCC
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCe
Confidence 432 3458899999999999999886421 0 0 00 0 23456778899999
Q ss_pred EeEEeee
Q 022962 247 LLQLCSV 253 (289)
Q Consensus 247 ~~~~~~~ 253 (289)
.+++...
T Consensus 349 ~v~~~~~ 355 (368)
T 3reo_A 349 GFKVASC 355 (368)
T ss_dssp EEEEEEE
T ss_pred eeEEEEe
Confidence 9888755
No 236
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.40 E-value=1.1e-12 Score=117.92 Aligned_cols=109 Identities=13% Similarity=0.167 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCC------ChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEE-EeccccccCCCCcCCCC
Q 022962 121 SNLKLVDVGTGA------GLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQI-VRGRAETLGKDVSFREQ 192 (289)
Q Consensus 121 ~~~~VLDiGcG~------G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~-~~~d~~~~~~~~~~~~~ 192 (289)
++.+|||+|||+ |. ..++...+ +++|+|+|+|+. ++++++ +++|+.+++. .++
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~----~~~ 123 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHT----ANK 123 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCC----SSC
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCc----cCc
Confidence 478999999965 55 44566666 689999999997 247888 9999988653 268
Q ss_pred ceEEEEcCcc---------------cHHHHHHHHccccccCeEEEEEE-cCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 193 YDVAVARAVA---------------EMRILAEYCLPLVRVGGLFVAAK-GHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 193 fD~V~sn~~~---------------~~~~ll~~~~~~LkpgG~l~~~~-g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
||+|+||... .++.+++.+.++|||||+|++.. .....++ +.+.++..||..+++.
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~---l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNAD---LYKLMGHFSWWTAFVT 195 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHH---HHHHHTTEEEEEEEEE
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHH---HHHHHHHcCCcEEEEE
Confidence 9999998321 24589999999999999999854 2223334 3445667888765554
No 237
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.38 E-value=5.6e-13 Score=124.14 Aligned_cols=95 Identities=21% Similarity=0.329 Sum_probs=75.8
Q ss_pred CCCeEEEEcCC------CChHHHHHHHH-CCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc---CC
Q 022962 121 SNLKLVDVGTG------AGLPGLVLAIA-CPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS---FR 190 (289)
Q Consensus 121 ~~~~VLDiGcG------~G~~~l~la~~-~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~---~~ 190 (289)
++.+||||||| +|..++.++.. +|+++|+|||+|++|. ....+++++++|+.+++.... .+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 36799999999 77778887765 5899999999999972 123589999999998643200 02
Q ss_pred CCceEEEEcCc---ccHHHHHHHHccccccCeEEEEE
Q 022962 191 EQYDVAVARAV---AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 191 ~~fD~V~sn~~---~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
++||+|++++. .+....+++++++|||||++++.
T Consensus 287 ~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 287 GPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 78999999853 45788999999999999999985
No 238
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.37 E-value=2.6e-12 Score=118.19 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=92.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|..+..++..+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +. + .||+|+++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~----p-~~D~v~~~~ 254 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SI----P-NADAVLLKY 254 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CC----C-CCSEEEEES
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CC----C-CccEEEeeh
Confidence 467999999999999999999999999999999 988877764 2469999999976 32 1 399999874
Q ss_pred c----ccHH--HHHHHHcccccc---CeEEEEEEc---CCc-H----H-----------------HHHHHHHHHHHhCCe
Q 022962 201 V----AEMR--ILAEYCLPLVRV---GGLFVAAKG---HDP-Q----E-----------------EVKNSERAVQLMGAS 246 (289)
Q Consensus 201 ~----~~~~--~ll~~~~~~Lkp---gG~l~~~~g---~~~-~----~-----------------ei~~~~~~l~~~g~~ 246 (289)
+ .+.. .+++++.++||| ||++++... ... . . ...++.+.++++||.
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~ 334 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQ 334 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCC
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCC
Confidence 2 3334 899999999999 999987642 111 0 0 023556778899999
Q ss_pred EeEEee
Q 022962 247 LLQLCS 252 (289)
Q Consensus 247 ~~~~~~ 252 (289)
.+++..
T Consensus 335 ~~~~~~ 340 (352)
T 1fp2_A 335 HYKISP 340 (352)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 888764
No 239
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.36 E-value=2.7e-12 Score=119.01 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=93.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
.++.+|||||||+|..+..++..+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +. +. ||+|+++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~----~~-~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SV----PQ-GDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC----CC-EEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CC----CC-CCEEEEe
Confidence 3478999999999999999999999999999999 888877654 2479999999976 33 23 9999997
Q ss_pred Cc----ccHH--HHHHHHccccccCeEEEEEE---cCCc---H----H----------------HHHHHHHHHHHhCCeE
Q 022962 200 AV----AEMR--ILAEYCLPLVRVGGLFVAAK---GHDP---Q----E----------------EVKNSERAVQLMGASL 247 (289)
Q Consensus 200 ~~----~~~~--~ll~~~~~~LkpgG~l~~~~---g~~~---~----~----------------ei~~~~~~l~~~g~~~ 247 (289)
.+ .+.. .+++++.++|+|||++++.. +... . . ...++.+.++++||+.
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCce
Confidence 43 3334 89999999999999999763 1110 0 0 1234556778899998
Q ss_pred eEEeee
Q 022962 248 LQLCSV 253 (289)
Q Consensus 248 ~~~~~~ 253 (289)
+++..+
T Consensus 355 ~~~~~~ 360 (372)
T 1fp1_D 355 FQVACR 360 (372)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 888754
No 240
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.36 E-value=4.3e-12 Score=118.81 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=87.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHCCC--------------------------------------CEEEEEeCChHHHH
Q 022962 118 SCNSNLKLVDVGTGAGLPGLVLAIACPD--------------------------------------WKVTLLESMNKRCV 159 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~l~la~~~p~--------------------------------------~~V~~iD~s~~~l~ 159 (289)
.+.++..|||.|||||.+++.+|....+ .+|+|+|+|+.|++
T Consensus 198 ~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~ 277 (393)
T 3k0b_A 198 SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIE 277 (393)
T ss_dssp CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHH
Confidence 3456789999999999999998865332 56999999999999
Q ss_pred HHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEEcCc--------ccHHHHHHHHcccccc--CeEEEEEEcCC
Q 022962 160 FLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVARAV--------AEMRILAEYCLPLVRV--GGLFVAAKGHD 228 (289)
Q Consensus 160 ~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~sn~~--------~~~~~ll~~~~~~Lkp--gG~l~~~~g~~ 228 (289)
.|++|++.+|+.+ ++++++|+.++... .+||+|++|.. ..+..+.+.+.+.||+ ||.+++..+..
T Consensus 278 ~Ar~Na~~~gl~~~I~~~~~D~~~~~~~----~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 278 IAKQNAVEAGLGDLITFRQLQVADFQTE----DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHHHHHTTCTTCSEEEECCGGGCCCC----CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHHHHHcCCCCceEEEECChHhCCCC----CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 9999999999864 99999999987642 58999999942 3455666666666665 99999988754
Q ss_pred c
Q 022962 229 P 229 (289)
Q Consensus 229 ~ 229 (289)
.
T Consensus 354 ~ 354 (393)
T 3k0b_A 354 L 354 (393)
T ss_dssp T
T ss_pred H
Confidence 4
No 241
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.35 E-value=4.9e-12 Score=117.17 Aligned_cols=121 Identities=16% Similarity=0.115 Sum_probs=92.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
.+..+|||||||+|..+..++..+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .. |+|++.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~p----~~-D~v~~~ 266 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EVP----SG-DTILMK 266 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCC----CC-SEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CCC----CC-CEEEeh
Confidence 3468999999999999999999999999999999 877766653 2479999999987 432 23 999987
Q ss_pred Cc------ccHHHHHHHHccccccCeEEEEEEcC--C----c-H------HH--------------HHHHHHHHHHhCCe
Q 022962 200 AV------AEMRILAEYCLPLVRVGGLFVAAKGH--D----P-Q------EE--------------VKNSERAVQLMGAS 246 (289)
Q Consensus 200 ~~------~~~~~ll~~~~~~LkpgG~l~~~~g~--~----~-~------~e--------------i~~~~~~l~~~g~~ 246 (289)
.+ .+...++++++++|+|||++++.... . . . .. ..++.+.++++||+
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~ 346 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFT 346 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCC
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCc
Confidence 42 23468999999999999999986421 1 0 0 00 13356678899999
Q ss_pred EeEEeee
Q 022962 247 LLQLCSV 253 (289)
Q Consensus 247 ~~~~~~~ 253 (289)
.+++...
T Consensus 347 ~v~~~~~ 353 (364)
T 3p9c_A 347 GVKSTYI 353 (364)
T ss_dssp EEEEEEE
T ss_pred eEEEEEc
Confidence 9988755
No 242
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.35 E-value=5e-12 Score=118.53 Aligned_cols=134 Identities=11% Similarity=0.018 Sum_probs=93.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+.+|||+|||+|.+++.+++.. +..+|+|+|+++.+++.| .+++++++|+.+... .++||+|++|.
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~----~~~fD~Ii~NP 106 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEP----GEAFDLILGNP 106 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCC----SSCEEEEEECC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCc----cCCCCEEEECc
Confidence 5699999999999999998765 578999999999998766 479999999988643 36899999982
Q ss_pred ------c---------cc------------------HHHHHHHHccccccCeEEEEEEcCCc--HHHHHHHHHHHHHhCC
Q 022962 201 ------V---------AE------------------MRILAEYCLPLVRVGGLFVAAKGHDP--QEEVKNSERAVQLMGA 245 (289)
Q Consensus 201 ------~---------~~------------------~~~ll~~~~~~LkpgG~l~~~~g~~~--~~ei~~~~~~l~~~g~ 245 (289)
. .+ ...+++.+.++|+|||++++..+... ......+.+.+.+.++
T Consensus 107 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 107 PYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp CCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred CccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 1 11 12678899999999999998875431 1112233445556665
Q ss_pred eEeEEeeee--cCCCCCceEEEEEEec
Q 022962 246 SLLQLCSVE--SQSPFGQRTAVVCLKS 270 (289)
Q Consensus 246 ~~~~~~~~~--~~~~~~~r~lv~~~k~ 270 (289)
..+..+. .+.......+++++|.
T Consensus 187 --~~i~~l~~~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 187 --TSVYYLGEVFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp --EEEEEEESCSTTCCCCEEEEEEESS
T ss_pred --eEEEECCCCCCCCCccEEEEEEEeC
Confidence 2222222 2233335566666664
No 243
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.35 E-value=7.5e-13 Score=129.59 Aligned_cols=100 Identities=15% Similarity=0.110 Sum_probs=78.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+.+|||||||+|.++..||+. +++|+|||+++.+++.|+..+.+.+.-+|++.+++++++... ..+++||+|+|..+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA-LEEGEFDLAIGLSV 143 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH-CCTTSCSEEEEESC
T ss_pred CCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh-ccCCCccEEEECcc
Confidence 579999999999999999976 789999999999999999999988865899999999987321 11368999999863
Q ss_pred c----cHH--HHHHHHccccccCeEEEEE
Q 022962 202 A----EMR--ILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 202 ~----~~~--~ll~~~~~~LkpgG~l~~~ 224 (289)
- +.. ..+..+.+.|+++|..++.
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 2 222 1223455667887776654
No 244
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.34 E-value=6.6e-12 Score=115.60 Aligned_cols=148 Identities=11% Similarity=-0.022 Sum_probs=100.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcC---C-----CCEEEEeccccccCCCC-cCCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ---L-----LNVQIVRGRAETLGKDV-SFRE 191 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~---l-----~ni~~~~~d~~~~~~~~-~~~~ 191 (289)
++.+|||||||+|..+..+++.. ..+|++||+|+.+++.|+++....+ + ++++++.+|+.++.... ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 36799999999999998887654 4899999999999999999865321 2 26999999998864310 0136
Q ss_pred CceEEEEcCcc----------cHHHHHHHH----ccccccCeEEEEEEcCCcHHHHHHHHHH-HHHhCCeEeEE--eeee
Q 022962 192 QYDVAVARAVA----------EMRILAEYC----LPLVRVGGLFVAAKGHDPQEEVKNSERA-VQLMGASLLQL--CSVE 254 (289)
Q Consensus 192 ~fD~V~sn~~~----------~~~~ll~~~----~~~LkpgG~l~~~~g~~~~~ei~~~~~~-l~~~g~~~~~~--~~~~ 254 (289)
+||+|++.... .-..+++.+ .++|+|||.+++..+.....++..+.+. ++. -|..+.. ..+.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~-~F~~v~~~~~~~~ 345 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGR-LYCPVEFSKEIVC 345 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTT-SSSCEEEEEEEEC
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHH-hCCceEEeeEeee
Confidence 89999998532 114556665 8999999999988765555555554443 333 4444444 2222
Q ss_pred cCCCCCceEEEEEEec
Q 022962 255 SQSPFGQRTAVVCLKS 270 (289)
Q Consensus 255 ~~~~~~~r~lv~~~k~ 270 (289)
.|.-.+.+....+.|.
T Consensus 346 vPsy~~~w~f~~~~k~ 361 (364)
T 2qfm_A 346 VPSYLELWVFYTVWKK 361 (364)
T ss_dssp CGGGSSCEEEEEEEEC
T ss_pred cCCchhheEeEEeecc
Confidence 3444455666666655
No 245
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.34 E-value=7.8e-12 Score=116.68 Aligned_cols=108 Identities=10% Similarity=0.034 Sum_probs=87.4
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHCCC--------------------------------------CEEEEEeCChHHHH
Q 022962 118 SCNSNLKLVDVGTGAGLPGLVLAIACPD--------------------------------------WKVTLLESMNKRCV 159 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~l~la~~~p~--------------------------------------~~V~~iD~s~~~l~ 159 (289)
.+.++..++|.+||||.+++..|....+ .+|+|+|+|+.|++
T Consensus 191 ~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~ 270 (384)
T 3ldg_A 191 NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVE 270 (384)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHH
Confidence 3456789999999999999998865332 56999999999999
Q ss_pred HHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEEcCc--------ccHHHHHHHHcccccc--CeEEEEEEcCC
Q 022962 160 FLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVARAV--------AEMRILAEYCLPLVRV--GGLFVAAKGHD 228 (289)
Q Consensus 160 ~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~sn~~--------~~~~~ll~~~~~~Lkp--gG~l~~~~g~~ 228 (289)
.|++|++.+|+.+ ++++++|+.++... .+||+|++|.. .+...+.+.+.+.||+ ||.+++..+..
T Consensus 271 ~Ar~Na~~~gl~~~I~~~~~D~~~l~~~----~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 271 IARKNAREVGLEDVVKLKQMRLQDFKTN----KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHHHHHTTCTTTEEEEECCGGGCCCC----CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HHHHHHHHcCCCCceEEEECChHHCCcc----CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 9999999999875 99999999987643 58999999942 3456666666666665 99999988753
Q ss_pred c
Q 022962 229 P 229 (289)
Q Consensus 229 ~ 229 (289)
.
T Consensus 347 ~ 347 (384)
T 3ldg_A 347 D 347 (384)
T ss_dssp T
T ss_pred H
Confidence 3
No 246
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.34 E-value=3.7e-13 Score=120.35 Aligned_cols=96 Identities=13% Similarity=0.005 Sum_probs=69.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH-cCCC-CEEEE--eccccccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL-TQLL-NVQIV--RGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~-~~l~-ni~~~--~~d~~~~~~~~~~~~~fD~V 196 (289)
++.+|||||||+|.++..++.. .+|+|||+++ ++..++++... .... +++++ ++|+.+++ +++||+|
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-----~~~fD~V 152 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-----PFQADTV 152 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-----CCCCSEE
T ss_pred CCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-----CCCcCEE
Confidence 4789999999999999998865 6999999998 53332221000 0011 68999 99998875 2689999
Q ss_pred EEcCc---cc-----H--HHHHHHHccccccCe--EEEEEE
Q 022962 197 VARAV---AE-----M--RILAEYCLPLVRVGG--LFVAAK 225 (289)
Q Consensus 197 ~sn~~---~~-----~--~~ll~~~~~~LkpgG--~l~~~~ 225 (289)
+|+.. .. . ..+++.+.++||||| .|++-.
T Consensus 153 vsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 153 LCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99742 11 1 137889999999999 888743
No 247
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.33 E-value=2.3e-11 Score=110.31 Aligned_cols=106 Identities=8% Similarity=-0.021 Sum_probs=84.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
..++.+|||+|||+|..++.+|... +.++|+|+|+++.+++.+++|++++|++|++++++|+.++.......++||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 3458899999999999999999764 568999999999999999999999999899999999988753211114799999
Q ss_pred EcCcc---------------------c-------HHHHHHHHccccccCeEEEEEE
Q 022962 198 ARAVA---------------------E-------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 198 sn~~~---------------------~-------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+++.. + ...+++.+.++++ ||++++..
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 86210 1 1357888888887 99887654
No 248
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.33 E-value=6.1e-12 Score=117.52 Aligned_cols=108 Identities=10% Similarity=0.083 Sum_probs=87.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHCC--------------------------------------CCEEEEEeCChHHHH
Q 022962 118 SCNSNLKLVDVGTGAGLPGLVLAIACP--------------------------------------DWKVTLLESMNKRCV 159 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~l~la~~~p--------------------------------------~~~V~~iD~s~~~l~ 159 (289)
.+.++.+|||.|||||.+++.+|.... ..+|+|+|+|+.+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 345678999999999999999886532 157999999999999
Q ss_pred HHHHHHHHcCCC-CEEEEeccccccCCCCcCCCCceEEEEcCc--------ccHHHHHHHHcccccc--CeEEEEEEcCC
Q 022962 160 FLEHAVSLTQLL-NVQIVRGRAETLGKDVSFREQYDVAVARAV--------AEMRILAEYCLPLVRV--GGLFVAAKGHD 228 (289)
Q Consensus 160 ~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~--------~~~~~ll~~~~~~Lkp--gG~l~~~~g~~ 228 (289)
.|++|++.+|+. +|++.++|+.++..+ ++||+|++|.. .....+.+.+.+.||+ ||.+++..+..
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~l~~~----~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQFKSE----DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGGCCCS----CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHHHHHcCCCCceEEEECChhhcCcC----CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 999999999986 699999999987642 68999999942 2456677777677766 99999888754
Q ss_pred c
Q 022962 229 P 229 (289)
Q Consensus 229 ~ 229 (289)
.
T Consensus 348 ~ 348 (385)
T 3ldu_A 348 D 348 (385)
T ss_dssp T
T ss_pred H
Confidence 3
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.31 E-value=9.3e-13 Score=119.33 Aligned_cols=113 Identities=15% Similarity=0.021 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeC----ChHHHHHHHHHHHHcCCCCEEEEec-cccccCCCCcCCCCce
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLES----MNKRCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~----s~~~l~~a~~~~~~~~l~ni~~~~~-d~~~~~~~~~~~~~fD 194 (289)
+++.+|||||||+|.++..+|+. .+|+|||+ ++.+++.+. .+..+.++++++++ |+.+++. ++||
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~~-----~~fD 150 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIPP-----ERCD 150 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSCC-----CCCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCCc-----CCCC
Confidence 34789999999999999999865 58999999 554332111 12223357999999 8877642 6899
Q ss_pred EEEEcCcc-------cHH---HHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHH
Q 022962 195 VAVARAVA-------EMR---ILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQL 242 (289)
Q Consensus 195 ~V~sn~~~-------~~~---~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~ 242 (289)
+|+|+... +.. .+++.+.++|||||.|++-.-.....+...+...++.
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~ 208 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQR 208 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHH
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHH
Confidence 99997431 111 4788889999999999874433322333344444443
No 250
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.31 E-value=3.8e-12 Score=114.12 Aligned_cols=73 Identities=22% Similarity=0.182 Sum_probs=63.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++....+. ++++++++|+.+++. .+||+|++|
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-----~~fD~vv~n 100 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-----PFFDTCVAN 100 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-----CCCSEEEEE
T ss_pred CCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-----hhhcEEEEe
Confidence 4779999999999999999987 46999999999999999998877765 579999999988753 369999998
Q ss_pred C
Q 022962 200 A 200 (289)
Q Consensus 200 ~ 200 (289)
.
T Consensus 101 l 101 (285)
T 1zq9_A 101 L 101 (285)
T ss_dssp C
T ss_pred c
Confidence 4
No 251
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.30 E-value=2.3e-11 Score=108.21 Aligned_cols=123 Identities=13% Similarity=0.117 Sum_probs=84.9
Q ss_pred CCeEEEEcCCC--ChHHHHHH-HHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---------CCcC
Q 022962 122 NLKLVDVGTGA--GLPGLVLA-IACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---------DVSF 189 (289)
Q Consensus 122 ~~~VLDiGcG~--G~~~l~la-~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---------~~~~ 189 (289)
..+|||||||+ |.....++ ...|+++|++||.|+.|++.|++.....+..+++++++|+.+... ..++
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 35899999997 32334444 457999999999999999999987765444479999999988521 0112
Q ss_pred CCCceEEEEcCc----cc---HHHHHHHHccccccCeEEEEEEcC-C-cHHHHHHHHHHHHHhCC
Q 022962 190 REQYDVAVARAV----AE---MRILAEYCLPLVRVGGLFVAAKGH-D-PQEEVKNSERAVQLMGA 245 (289)
Q Consensus 190 ~~~fD~V~sn~~----~~---~~~ll~~~~~~LkpgG~l~~~~g~-~-~~~ei~~~~~~l~~~g~ 245 (289)
++++ .|++|++ .+ ...+++.+.+.|+|||+|++.... + ..++...+.+.++..|.
T Consensus 159 ~~p~-av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~ 222 (277)
T 3giw_A 159 TRPV-ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNM 222 (277)
T ss_dssp TSCC-EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTC
T ss_pred CCcc-hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCC
Confidence 2333 4777753 23 568999999999999999987542 2 23444445555555554
No 252
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.30 E-value=1.3e-11 Score=113.70 Aligned_cols=119 Identities=17% Similarity=0.148 Sum_probs=91.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+..+|||||||+|..+..++..+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +. ..||+|+++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SI-----PSADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CC-----CCCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CC-----CCceEEEEcc
Confidence 367999999999999999999999999999999 677766553 3469999999986 33 2499999984
Q ss_pred c----cc--HHHHHHHHcccccc---CeEEEEEEc---CCcH-------H----------------HHHHHHHHHHHhCC
Q 022962 201 V----AE--MRILAEYCLPLVRV---GGLFVAAKG---HDPQ-------E----------------EVKNSERAVQLMGA 245 (289)
Q Consensus 201 ~----~~--~~~ll~~~~~~Lkp---gG~l~~~~g---~~~~-------~----------------ei~~~~~~l~~~g~ 245 (289)
+ .+ ...+++++.++|+| ||++++... .... . ...++.+.++++||
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 339 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 339 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCC
Confidence 3 33 34999999999999 999987542 1110 0 12345567788999
Q ss_pred eEeEEee
Q 022962 246 SLLQLCS 252 (289)
Q Consensus 246 ~~~~~~~ 252 (289)
+.+++..
T Consensus 340 ~~~~~~~ 346 (358)
T 1zg3_A 340 SSYKITP 346 (358)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 9888764
No 253
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.30 E-value=2.4e-12 Score=113.12 Aligned_cols=96 Identities=10% Similarity=-0.057 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
..+|||||||+|.+++.++...|..+|+|+|+|+.+++++++++..+|+. .++...|...-.. .++||+|+++-.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~p----~~~~DvaL~lkt 207 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDRL----DEPADVTLLLKT 207 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSCC----CSCCSEEEETTC
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccCC----CCCcchHHHHHH
Confidence 66999999999999999988889999999999999999999999999985 8888888765433 378999999842
Q ss_pred cc------HHHHHHHHccccccCeEEEE
Q 022962 202 AE------MRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 202 ~~------~~~ll~~~~~~LkpgG~l~~ 223 (289)
.+ ....+ .+...|+++|.++-
T Consensus 208 i~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 208 LPCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred HHHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 21 12444 67889999999884
No 254
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.29 E-value=1e-12 Score=116.77 Aligned_cols=95 Identities=19% Similarity=0.034 Sum_probs=69.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHH---HHcCCCCEEEE--eccccccCCCCcCCCCceE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAV---SLTQLLNVQIV--RGRAETLGKDVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~---~~~~l~ni~~~--~~d~~~~~~~~~~~~~fD~ 195 (289)
++.+|||||||+|.++..++.. .+|+|||+++ ++..+++.. +..+. ++.++ ++|+.+++ +++||+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~-~v~~~~~~~D~~~l~-----~~~fD~ 143 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGW-NIVKFKSRVDIHTLP-----VERTDV 143 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTG-GGEEEECSCCTTTSC-----CCCCSE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCC-CeEEEecccCHhHCC-----CCCCcE
Confidence 4789999999999999998865 6999999998 432222110 01111 68999 89998875 268999
Q ss_pred EEEcCc---cc----HH---HHHHHHccccccCe--EEEEEE
Q 022962 196 AVARAV---AE----MR---ILAEYCLPLVRVGG--LFVAAK 225 (289)
Q Consensus 196 V~sn~~---~~----~~---~ll~~~~~~LkpgG--~l~~~~ 225 (289)
|+|+.. .. .. .+++.+.++||||| .|++-.
T Consensus 144 V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 144 IMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 999732 11 11 37889999999999 888743
No 255
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.29 E-value=5e-12 Score=114.14 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++++..+.+|++++++|+.+++. .+||+|++|.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~-----~~~D~Vv~n~ 114 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF-----PKFDVCTANI 114 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-----CCCSEEEEEC
T ss_pred CcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-----ccCCEEEEcC
Confidence 4779999999999999999865 57999999999999999999988888889999999988753 4799999984
No 256
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.25 E-value=6.2e-12 Score=103.90 Aligned_cols=113 Identities=10% Similarity=0.072 Sum_probs=82.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+.++.+|||||||+ +++|+|+.|++.|+++... +++++++|+++++.....+++||+|++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeEEEE
Confidence 45689999999996 2499999999999886432 589999999987641001478999999
Q ss_pred cC----c-ccHHHHHHHHccccccCeEEEEEEcCC-------cHHHHHHHHHHHHHhCCeEeEEeee
Q 022962 199 RA----V-AEMRILAEYCLPLVRVGGLFVAAKGHD-------PQEEVKNSERAVQLMGASLLQLCSV 253 (289)
Q Consensus 199 n~----~-~~~~~ll~~~~~~LkpgG~l~~~~g~~-------~~~ei~~~~~~l~~~g~~~~~~~~~ 253 (289)
+. + .+...++++++++|||||+|++..... ......++.+.++.+|| +. +...
T Consensus 70 ~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~-~~~~ 134 (176)
T 2ld4_A 70 GLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE-VKEL 134 (176)
T ss_dssp CCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE-EEEE
T ss_pred CChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE-eecC
Confidence 73 3 577999999999999999999864310 11113455667789999 44 4433
No 257
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.23 E-value=3.6e-11 Score=104.68 Aligned_cols=95 Identities=9% Similarity=-0.056 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
.+.+|||||||+|.+++.++ +..+++|+|+|+.+++++++++..++. +.++..+|....+. .++||+|+++-
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~----~~~~DvvLllk 176 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPP----AEAGDLALIFK 176 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCC----CCBCSEEEEES
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCC----CCCcchHHHHH
Confidence 36799999999999888876 789999999999999999999998885 68899999876554 36899999983
Q ss_pred cc------cHHHHHHHHccccccCeEEEEE
Q 022962 201 VA------EMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 201 ~~------~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.. .....+ .+...|+++|.++-.
T Consensus 177 ~lh~LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 177 LLPLLEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp CHHHHHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHhhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 21 112233 556689999998843
No 258
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.16 E-value=8.4e-11 Score=105.91 Aligned_cols=73 Identities=21% Similarity=0.267 Sum_probs=63.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|||+|+.+++.++++... ..|++++++|+.+++.. +.+||.|++|.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~--~~~v~vi~gD~l~~~~~---~~~fD~Iv~Nl 122 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL--YNNIEIIWGDALKVDLN---KLDFNKVVANL 122 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH--CSSEEEEESCTTTSCGG---GSCCSEEEEEC
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc--CCCeEEEECchhhCCcc---cCCccEEEEeC
Confidence 4789999999999999999987 67999999999999999998873 45899999999987653 24799999994
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.15 E-value=6.7e-10 Score=97.99 Aligned_cols=75 Identities=19% Similarity=0.161 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcC-CCCceEEEEc
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF-REQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~-~~~fD~V~sn 199 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++... ..+++++++|+.+++....+ +++|| |++|
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred CcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 4789999999999999999875 47999999999999999998765 35899999999988653211 35788 8888
Q ss_pred C
Q 022962 200 A 200 (289)
Q Consensus 200 ~ 200 (289)
-
T Consensus 104 l 104 (255)
T 3tqs_A 104 L 104 (255)
T ss_dssp C
T ss_pred C
Confidence 4
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.13 E-value=7.3e-11 Score=106.61 Aligned_cols=79 Identities=11% Similarity=0.111 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cC-CCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SF-REQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~-~~~fD~V~s 198 (289)
++.+|||+|||+|..++.++...|+++|+|+|+|+.|++.|+++++.++ .+++++++|+.+++... .. .++||.|++
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLGIEKVDGILM 104 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcCCCCCCEEEE
Confidence 4789999999999999999998888899999999999999999998887 68999999998864210 00 147999998
Q ss_pred cC
Q 022962 199 RA 200 (289)
Q Consensus 199 n~ 200 (289)
+.
T Consensus 105 D~ 106 (301)
T 1m6y_A 105 DL 106 (301)
T ss_dssp EC
T ss_pred cC
Confidence 74
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.10 E-value=1.3e-10 Score=110.30 Aligned_cols=102 Identities=13% Similarity=0.020 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-------------CCCEEEEEeCChHHHHHHHHHHHHcCCC--CEEEEeccccccCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-------------PDWKVTLLESMNKRCVFLEHAVSLTQLL--NVQIVRGRAETLGK 185 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-------------p~~~V~~iD~s~~~l~~a~~~~~~~~l~--ni~~~~~d~~~~~~ 185 (289)
++.+|||.|||||.+.+.++... +..+++|+|+++.+++.|+.|....|+. ++.++++|......
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 46799999999999988887642 3468999999999999999999888875 67889999876543
Q ss_pred CCcCCCCceEEEEcCc-c-----c---------------HHHHHHHHccccccCeEEEEEEc
Q 022962 186 DVSFREQYDVAVARAV-A-----E---------------MRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 186 ~~~~~~~fD~V~sn~~-~-----~---------------~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
..+||+|++|.. . . ...+++.+.+.|+|||++.+..+
T Consensus 251 ----~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 251 ----STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp ----SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 248999999941 0 0 13788999999999999988764
No 262
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.09 E-value=4e-10 Score=112.75 Aligned_cols=108 Identities=10% Similarity=0.006 Sum_probs=84.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHC------------------------------------------CCCEEEEEeCChH
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIAC------------------------------------------PDWKVTLLESMNK 156 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~------------------------------------------p~~~V~~iD~s~~ 156 (289)
+.++..|||.+||||.+++.+|... +..+|+|+|+|+.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 4457899999999999999988641 2358999999999
Q ss_pred HHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEEEEcCc--------ccHHHHHHHHcccc---ccCeEEEEE
Q 022962 157 RCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVAVARAV--------AEMRILAEYCLPLV---RVGGLFVAA 224 (289)
Q Consensus 157 ~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V~sn~~--------~~~~~ll~~~~~~L---kpgG~l~~~ 224 (289)
+++.|+.|++..|+.+ |++.++|+.++..+. ..++||+|++|.. .+...+.+.+.+.| .|||.+++.
T Consensus 268 av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~-~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 268 VIQRARTNARLAGIGELITFEVKDVAQLTNPL-PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC-TTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhhCcccc-ccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 9999999999999976 999999999874321 1237999999941 23455555554444 479999998
Q ss_pred EcC
Q 022962 225 KGH 227 (289)
Q Consensus 225 ~g~ 227 (289)
.+.
T Consensus 347 t~~ 349 (703)
T 3v97_A 347 SAS 349 (703)
T ss_dssp ESC
T ss_pred eCC
Confidence 875
No 263
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.08 E-value=1.6e-10 Score=108.31 Aligned_cols=75 Identities=19% Similarity=0.145 Sum_probs=64.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc--CCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT--QLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~--~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+.+|||+|||+|..++.+|.. +.+|+|||+|+.+++.|++|++.+ |+++++++++|+.++... ..+++||+|+++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-IKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-HHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-ccCCCceEEEEC
Confidence 789999999999999998865 579999999999999999999998 888899999999875211 002479999998
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.06 E-value=4.9e-11 Score=105.47 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCCh-------HHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCC--C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMN-------KRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFR--E 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~-------~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~--~ 191 (289)
+.+|||+|||+|..++.+|.. +++|+|+|+|+ .+++.|++|++.+++.+ ++++++|++++... ..+ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~-~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA-LVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH-HHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh-hhccCC
Confidence 679999999999999999975 57999999999 99999999988888755 99999999885221 001 5
Q ss_pred CceEEEEcCc
Q 022962 192 QYDVAVARAV 201 (289)
Q Consensus 192 ~fD~V~sn~~ 201 (289)
+||+|+++..
T Consensus 161 ~fD~V~~dP~ 170 (258)
T 2r6z_A 161 KPDIVYLDPM 170 (258)
T ss_dssp CCSEEEECCC
T ss_pred CccEEEECCC
Confidence 7999999863
No 265
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.06 E-value=1.1e-09 Score=96.72 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=94.8
Q ss_pred CCeEEEEcCCCChHHHHHHHH-------CCC-----CEEEEEeCCh---HHHH-----------HHHHHHHH--------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA-------CPD-----WKVTLLESMN---KRCV-----------FLEHAVSL-------- 167 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~-------~p~-----~~V~~iD~s~---~~l~-----------~a~~~~~~-------- 167 (289)
+.+|||+|||+|...+.++.. .|. .+|+++|..+ +.+. .++++.+.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 569999999999998887654 563 5899999887 4433 55665553
Q ss_pred ----c--CCCCEEEEecccccc-CCCCc-CCCCceEEEEcCccc-------HHHHHHHHccccccCeEEEEEEcCCcHHH
Q 022962 168 ----T--QLLNVQIVRGRAETL-GKDVS-FREQYDVAVARAVAE-------MRILAEYCLPLVRVGGLFVAAKGHDPQEE 232 (289)
Q Consensus 168 ----~--~l~ni~~~~~d~~~~-~~~~~-~~~~fD~V~sn~~~~-------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e 232 (289)
+ +..+++++.+|+.+. +.... ....||+|+..++++ ...+++.+.++|+|||+|+.+... ..
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa---~~ 217 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA---GF 217 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB---HH
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC---HH
Confidence 1 223688999999884 32110 012799999986432 368999999999999999864432 22
Q ss_pred HHHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEec
Q 022962 233 VKNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLKS 270 (289)
Q Consensus 233 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k~ 270 (289)
+.+.+...||.+.+.. ...+.|.++...+.
T Consensus 218 ---vrr~L~~aGF~v~~~~-----g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 218 ---VRRGLQEAGFTMQKRK-----GFGRKREMLCGVME 247 (257)
T ss_dssp ---HHHHHHHHTEEEEEEC-----CSTTCCCEEEEEEC
T ss_pred ---HHHHHHHCCCEEEeCC-----CCCCCCceEEEEec
Confidence 3456778999876553 44456666666654
No 266
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.05 E-value=6.6e-12 Score=109.85 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +.+|+|+|+|+.+++.++++++ +..+++++++|+.+++... +++| .|++|.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~--~~~f-~vv~n~ 101 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPN--KQRY-KIVGNI 101 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCC--SSEE-EEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCccc--CCCc-EEEEeC
Confidence 4779999999999999999987 3799999999999999988765 3357999999999876421 2578 788883
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.03 E-value=3.1e-09 Score=92.88 Aligned_cols=73 Identities=21% Similarity=0.226 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++... .+|+|+|+|+.+++.++++... .++++++++|+.+++... ...| .|++|.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~~--~~~~-~vv~nl 102 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFPK--NQSY-KIFGNI 102 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCCS--SCCC-EEEEEC
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCccc--CCCe-EEEEeC
Confidence 47899999999999999999873 7999999999999999988754 358999999999876431 2346 577773
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.03 E-value=9.4e-10 Score=97.87 Aligned_cols=72 Identities=26% Similarity=0.175 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++ +|||||||+|.++..++.. +.+|+|+|+|+.+++.++++... .|++++++|+.+++.+. ...||.|++|-
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~~--~~~~~~iv~Nl 118 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWEE--VPQGSLLVANL 118 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGGG--SCTTEEEEEEE
T ss_pred CC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChhh--ccCccEEEecC
Confidence 47 9999999999999999976 47999999999999999987652 48999999999876531 12689999993
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.02 E-value=6.1e-10 Score=109.49 Aligned_cols=96 Identities=15% Similarity=0.083 Sum_probs=74.7
Q ss_pred CCeEEEEcCCCChHHHHH---HHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVL---AIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~l---a~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
...|||||||+|.++... +... -..+|+|||.|+ ++..+++..+.++.++ |+++++|++++..+ +++|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP----EKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP----EKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS----SCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC----cccCEE
Confidence 457999999999994443 3332 124799999997 5667888888888864 99999999998653 799999
Q ss_pred EEcCc------ccHHHHHHHHccccccCeEEE
Q 022962 197 VARAV------AEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 197 ~sn~~------~~~~~ll~~~~~~LkpgG~l~ 222 (289)
||--+ +.+...+....++|||||.++
T Consensus 433 VSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99621 234567888899999999987
No 270
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.01 E-value=1.3e-08 Score=91.15 Aligned_cols=146 Identities=17% Similarity=0.132 Sum_probs=108.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH-----cCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL-----TQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~-----~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
..+||=||-|.|..+..+++..+..+|+.||+++..++.+++.... +.-.+++++.+|...+-.. ..++||+|
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~--~~~~yDvI 161 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTFDVI 161 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC--SSCCEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh--ccccCCEE
Confidence 6799999999999988888665668999999999999999986543 2224799999999887543 35789999
Q ss_pred EEcCcc--------cHHHHHHHHccccccCeEEEEEEcC--CcHHHHHHHHHHHHHhCCeEeEEeeeecCCC-CCceEEE
Q 022962 197 VARAVA--------EMRILAEYCLPLVRVGGLFVAAKGH--DPQEEVKNSERAVQLMGASLLQLCSVESQSP-FGQRTAV 265 (289)
Q Consensus 197 ~sn~~~--------~~~~ll~~~~~~LkpgG~l~~~~g~--~~~~ei~~~~~~l~~~g~~~~~~~~~~~~~~-~~~r~lv 265 (289)
+..... --.++++.+++.|+|||.++.-.+. ...+.+..+.+.+++. |..+.......|.- .|.+..+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~-F~~v~~~~~~vPty~~g~w~f~ 240 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHH-CSEEEEEEECCTTSSSSCEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhh-CCceeeeeeeeccCCCcceehe
Confidence 987422 1268999999999999999976542 3456667777777776 44455544444543 4666677
Q ss_pred EEEec
Q 022962 266 VCLKS 270 (289)
Q Consensus 266 ~~~k~ 270 (289)
++.|.
T Consensus 241 ~as~~ 245 (294)
T 3o4f_A 241 WATDN 245 (294)
T ss_dssp EEESC
T ss_pred eEECC
Confidence 76654
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.01 E-value=4e-09 Score=92.65 Aligned_cols=73 Identities=18% Similarity=0.105 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+|||||||+|.++..++.. +..+|+|||+|+.+++.++++ ...|++++++|+.+++....+ +.| .|++|-
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~~~-~~~-~vv~Nl 103 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFCSLG-KEL-KVVGNL 103 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGGGSC-SSE-EEEEEC
T ss_pred CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChhHcc-CCc-EEEEEC
Confidence 3779999999999999999865 458999999999999999886 234899999999988654221 234 788884
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.98 E-value=3.5e-09 Score=90.03 Aligned_cols=98 Identities=15% Similarity=0.013 Sum_probs=76.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC---CCEEEEecccccc---------------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL---LNVQIVRGRAETL--------------- 183 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l---~ni~~~~~d~~~~--------------- 183 (289)
..+||++|| |+.++.+|+. ++++|+.||.+++..+.++++.+..|+ ++|+++.+|+.+.
T Consensus 31 a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 579999998 4788888874 478999999999999999999999985 4799999997542
Q ss_pred CC------CCcCCCCceEEEEcCcccHHHHHHHHccccccCeEEEE
Q 022962 184 GK------DVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 184 ~~------~~~~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
+. .....++||+|+..+-.. ...+..+.+.|+|||.+++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~-~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR-VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH-HHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc-hhHHHHHHHhcCCCeEEEE
Confidence 10 000126899999997433 3555567789999999865
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.97 E-value=2.5e-09 Score=95.48 Aligned_cols=76 Identities=14% Similarity=0.037 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCC--CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCC-C--CceE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPD--WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFR-E--QYDV 195 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~--~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~-~--~fD~ 195 (289)
++.+|||||||+|.++..++...+. .+|+|+|+|+.+++.++++. ..+++++++|+.+++.+..++ . ..+.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~~~~~~~~~~~~~ 117 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFGSIARPGDEPSLR 117 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGGGGSCSSSSCCEE
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChhHhcccccCCceE
Confidence 4789999999999999999987432 45999999999999999983 347999999999886542221 1 3467
Q ss_pred EEEcC
Q 022962 196 AVARA 200 (289)
Q Consensus 196 V~sn~ 200 (289)
|++|-
T Consensus 118 vv~Nl 122 (279)
T 3uzu_A 118 IIGNL 122 (279)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 88884
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.94 E-value=6e-09 Score=91.72 Aligned_cols=76 Identities=14% Similarity=-0.025 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcC--CCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF--REQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~--~~~fD~V~s 198 (289)
++.+|||||||+|.++. ++. .+..+|+|+|+|+.+++.++++.... .|++++++|+.+++....+ .+..|.|++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~~~~~~~~vvs 96 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAEKMGQPLRVFG 96 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHHHHTSCEEEEE
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhcccCCceEEEE
Confidence 47799999999999999 654 33233999999999999999876543 4799999999987543111 124589999
Q ss_pred cC
Q 022962 199 RA 200 (289)
Q Consensus 199 n~ 200 (289)
|.
T Consensus 97 Nl 98 (252)
T 1qyr_A 97 NL 98 (252)
T ss_dssp EC
T ss_pred CC
Confidence 94
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.93 E-value=2.9e-09 Score=103.49 Aligned_cols=104 Identities=9% Similarity=-0.049 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC------------------CCEEEEEeCChHHHHHHHHHHHHcCCCC-----EEEEe
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP------------------DWKVTLLESMNKRCVFLEHAVSLTQLLN-----VQIVR 177 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p------------------~~~V~~iD~s~~~l~~a~~~~~~~~l~n-----i~~~~ 177 (289)
++.+|+|.|||||.+.+.++.... ...++|+|+++.++..|+.|+...|+.+ +.+++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 467999999999999888775421 2479999999999999999998888765 78889
Q ss_pred ccccccCCCCcCCCCceEEEEcCc-c-----------------cHHHHHHHHccccccCeEEEEEEc
Q 022962 178 GRAETLGKDVSFREQYDVAVARAV-A-----------------EMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 178 ~d~~~~~~~~~~~~~fD~V~sn~~-~-----------------~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
+|....... ...+||+|++|+. . ....+++.+.+.|+|||++.++.+
T Consensus 249 gDtL~~~~~--~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 249 GNTLGSDGE--NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SCTTSHHHH--TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcccccc--cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 987654211 1267999999941 0 123688999999999999998764
No 276
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.90 E-value=5.1e-09 Score=96.65 Aligned_cols=106 Identities=14% Similarity=0.059 Sum_probs=86.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC------CCEEEEeccccccCCCCcCCC
Q 022962 118 SCNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL------LNVQIVRGRAETLGKDVSFRE 191 (289)
Q Consensus 118 ~~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l------~ni~~~~~d~~~~~~~~~~~~ 191 (289)
+.++|.+|||+|+|.|.=++.+|...+...|+|+|+|+..+..+++++++++. .++.+.+.|...+... ..+
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~--~~~ 222 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL--EGD 222 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH--STT
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh--ccc
Confidence 35678999999999999999998876677899999999999999999998875 3688888898776431 246
Q ss_pred CceEEEEcCc---------------------------cc-HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV---------------------------AE-MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~---------------------------~~-~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.||.|+..+. .. -..+|..+.++|||||+++...
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 8999998621 01 2578899999999999998654
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.90 E-value=3e-09 Score=104.83 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=73.9
Q ss_pred CCeEEEEcCCCChHHHHHHHH----C---------CCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccccCCC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA----C---------PDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAETLGKD- 186 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~----~---------p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~~~~~- 186 (289)
+..|||||||+|.++...+++ . ...+|+|||.|+.++..++.... ++.++ |+++++|++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 458999999999997532221 1 23599999999988776666554 67655 99999999998541
Q ss_pred -CcCCCCceEEEEcCc------ccHHHHHHHHccccccCeEEE
Q 022962 187 -VSFREQYDVAVARAV------AEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 187 -~~~~~~fD~V~sn~~------~~~~~ll~~~~~~LkpgG~l~ 222 (289)
....+++|+|||--+ +-.++.+..+.++|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 001378999999732 134578888899999999987
No 278
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.88 E-value=1.2e-08 Score=102.02 Aligned_cols=106 Identities=12% Similarity=0.031 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC---CCEEEEEeCChHHHHHH--HHHHHH----cCCCCEEEEeccccccCCCCcCCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP---DWKVTLLESMNKRCVFL--EHAVSL----TQLLNVQIVRGRAETLGKDVSFRE 191 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p---~~~V~~iD~s~~~l~~a--~~~~~~----~~l~ni~~~~~d~~~~~~~~~~~~ 191 (289)
++.+|||.|||+|.+.+.++...+ ..+++|+|+++.+++.| +.++.. .+..+..+...|..+... ....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~--~~~~ 398 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP--EDFA 398 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG--GGGT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc--cccC
Confidence 478999999999999999887664 35899999999999999 665544 233334566666665322 1236
Q ss_pred CceEEEEcCc-----------c----------------------cHHHHHHHHccccccCeEEEEEEcCC
Q 022962 192 QYDVAVARAV-----------A----------------------EMRILAEYCLPLVRVGGLFVAAKGHD 228 (289)
Q Consensus 192 ~fD~V~sn~~-----------~----------------------~~~~ll~~~~~~LkpgG~l~~~~g~~ 228 (289)
+||+|++|.. . -...+++.+.+.|++||++.+..+..
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 8999999931 0 03357888999999999999887653
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.87 E-value=4e-08 Score=95.37 Aligned_cols=150 Identities=11% Similarity=0.005 Sum_probs=100.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC---CCCEEEEEeCChHHHHHHHHHHHHcCC--CCEEEEeccccccCCCCcCCCCceE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC---PDWKVTLLESMNKRCVFLEHAVSLTQL--LNVQIVRGRAETLGKDVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~---p~~~V~~iD~s~~~l~~a~~~~~~~~l--~ni~~~~~d~~~~~~~~~~~~~fD~ 195 (289)
++.+|+|.|||||.+.+.++... +...++|+|+++.++..|+.|....|+ +++.+.++|......+.....+||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 47799999999999988887764 357999999999999999999988888 4689999998765211012368999
Q ss_pred EEEcCc------------cc-----H----------HHHHHHHccccc-cCeEEEEEEcCCcH---HHHHHHHHHHHHhC
Q 022962 196 AVARAV------------AE-----M----------RILAEYCLPLVR-VGGLFVAAKGHDPQ---EEVKNSERAVQLMG 244 (289)
Q Consensus 196 V~sn~~------------~~-----~----------~~ll~~~~~~Lk-pgG~l~~~~g~~~~---~ei~~~~~~l~~~g 244 (289)
|++|+. .+ + -.+++.+.+.|+ +||++.++.+.... ..-..+.+.+-+.+
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~ 380 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEG 380 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTT
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCC
Confidence 999930 00 0 147899999999 99999887654321 11123334444444
Q ss_pred CeEeEEeeeec---CCCCCceEEEEEEecC
Q 022962 245 ASLLQLCSVES---QSPFGQRTAVVCLKSR 271 (289)
Q Consensus 245 ~~~~~~~~~~~---~~~~~~r~lv~~~k~~ 271 (289)
. +..+..+.. ....-.-.+++++|.+
T Consensus 381 ~-l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 381 A-IDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp C-EEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred c-eeEEEEccccccCCCCCcEEEEEEecCC
Confidence 3 444443321 1111234566666654
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.83 E-value=3.6e-09 Score=93.41 Aligned_cols=93 Identities=18% Similarity=0.194 Sum_probs=66.8
Q ss_pred CeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHc-------C-C-CCEEEEeccccccCCCCcCCCCc
Q 022962 123 LKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLT-------Q-L-LNVQIVRGRAETLGKDVSFREQY 193 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~-------~-l-~ni~~~~~d~~~~~~~~~~~~~f 193 (289)
.+|||+|||+|..++.+|.. +++|++||+++.+++.++++.+.. + + ++++++++|..++... ..++|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~--~~~~f 165 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD--ITPRP 165 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT--CSSCC
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh--CcccC
Confidence 79999999999999999987 568999999999888888876543 2 3 4699999999886332 22479
Q ss_pred eEEEEcCcc---cHHHHHHHHccccccCe
Q 022962 194 DVAVARAVA---EMRILAEYCLPLVRVGG 219 (289)
Q Consensus 194 D~V~sn~~~---~~~~ll~~~~~~LkpgG 219 (289)
|+|+++..- .-...+++..+.|++.+
T Consensus 166 DvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 166 QVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp SEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred CEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 999998521 11234455556666544
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.78 E-value=1.7e-08 Score=98.11 Aligned_cols=147 Identities=7% Similarity=-0.073 Sum_probs=95.0
Q ss_pred CeEEEEcCCCChHHHHHHHHCC---------------CCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCC
Q 022962 123 LKLVDVGTGAGLPGLVLAIACP---------------DWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKD 186 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~p---------------~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~ 186 (289)
.+|+|.|||||.+.+.++.... ...++|+|+++.++..|+.|....|++ ++.+.++|....+..
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999998877654321 468999999999999999999888875 344477776544321
Q ss_pred CcCCCCceEEEEcC---cc---------c---------------------HHHHHHHHccccccCeEEEEEEcCCcH---
Q 022962 187 VSFREQYDVAVARA---VA---------E---------------------MRILAEYCLPLVRVGGLFVAAKGHDPQ--- 230 (289)
Q Consensus 187 ~~~~~~fD~V~sn~---~~---------~---------------------~~~ll~~~~~~LkpgG~l~~~~g~~~~--- 230 (289)
...+||+|++|+ .. + --.+++.+.+.|+|||++.++.+....
T Consensus 326 --~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~ 403 (544)
T 3khk_A 326 --PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSN 403 (544)
T ss_dssp --TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCC
T ss_pred --ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcC
Confidence 236899999993 10 0 015889999999999999887643211
Q ss_pred -HHHHHHHHHHHHhCCeEeEEeeeec---CCCCCceEEEEEEecCC
Q 022962 231 -EEVKNSERAVQLMGASLLQLCSVES---QSPFGQRTAVVCLKSRR 272 (289)
Q Consensus 231 -~ei~~~~~~l~~~g~~~~~~~~~~~---~~~~~~r~lv~~~k~~~ 272 (289)
.....+.+.+-+.+. +..+..+.. ....-.-.+++++|.++
T Consensus 404 ~~~~~~iRk~Lle~~~-l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 404 TNNEGEIRKTLVEQDL-VECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp GGGHHHHHHHHHHTTC-EEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred cchHHHHHHHHHhCCc-HhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 111223334444443 444543321 11122455677776654
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.72 E-value=6.3e-08 Score=85.48 Aligned_cols=122 Identities=11% Similarity=-0.031 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+++.+|||||||+|.++..++...+...|+|+|+...+....... ...+. ++..++.+++..... +++||+|+|+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~dv~~l~---~~~~DlVlsD 147 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTDIHRLE---PVKCDTLLCD 147 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCCTTTSC---CCCCSEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccceehhcC---CCCccEEEec
Confidence 347799999999999999888665667889999874321000000 00111 455566665443322 3689999998
Q ss_pred Ccc--------cH--HHHHHHHccccccC-eEEEEEEcCC-cHHHHHHHHHHHHHhCCeE
Q 022962 200 AVA--------EM--RILAEYCLPLVRVG-GLFVAAKGHD-PQEEVKNSERAVQLMGASL 247 (289)
Q Consensus 200 ~~~--------~~--~~ll~~~~~~Lkpg-G~l~~~~g~~-~~~ei~~~~~~l~~~g~~~ 247 (289)
... .. -.+++.+.++|+|| |.|++ +-.. ..++..++.+.++..--.+
T Consensus 148 ~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~pyg~~~~~l~~~lk~~F~~V 206 (277)
T 3evf_A 148 IGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLAPYMPDVLEKLELLQRRFGGT 206 (277)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESCTTSHHHHHHHHHHHHHHCCE
T ss_pred CccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecCCCCccHHHHHHHHHHhcCCE
Confidence 421 11 24578889999999 99987 4332 1455556666666543333
No 283
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.68 E-value=1.8e-07 Score=83.54 Aligned_cols=124 Identities=13% Similarity=0.021 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-----CCCEEEEEeCChH--------------------------HHHHHHHHHHHcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-----PDWKVTLLESMNK--------------------------RCVFLEHAVSLTQ 169 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-----p~~~V~~iD~s~~--------------------------~l~~a~~~~~~~~ 169 (289)
..+.||++||..|..++.+|... ++.+|+++|..+. .++.++++.++.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 36799999999999999987654 4789999997521 4677899999999
Q ss_pred C--CCEEEEeccccccCCCCcCCCCceEEEEcCcc--cHHHHHHHHccccccCeEEEEEEcCCc-HHHHHHHHHHHHHhC
Q 022962 170 L--LNVQIVRGRAETLGKDVSFREQYDVAVARAVA--EMRILAEYCLPLVRVGGLFVAAKGHDP-QEEVKNSERAVQLMG 244 (289)
Q Consensus 170 l--~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~~--~~~~ll~~~~~~LkpgG~l~~~~g~~~-~~ei~~~~~~l~~~g 244 (289)
+ ++|+++.+++.+.-.. ...++||+|+..+-. .....++.+.+.|+|||.+++ ..... ....+.+.+..+..|
T Consensus 186 l~~~~I~li~Gda~etL~~-~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~-DD~~~~~G~~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPT-APIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIV-DDYMMCPPCKDAVDEYRAKFD 263 (282)
T ss_dssp CCSTTEEEEESCHHHHSTT-CCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEE-SSCTTCHHHHHHHHHHHHHTT
T ss_pred CCcCceEEEEeCHHHHHhh-CCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEE-cCCCCCHHHHHHHHHHHHhcC
Confidence 8 5799999999874322 113689999988632 456889999999999999876 33322 333344444555667
Q ss_pred Ce
Q 022962 245 AS 246 (289)
Q Consensus 245 ~~ 246 (289)
+.
T Consensus 264 i~ 265 (282)
T 2wk1_A 264 IA 265 (282)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.68 E-value=6.9e-07 Score=82.23 Aligned_cols=138 Identities=14% Similarity=0.049 Sum_probs=90.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+.+|.+|||+||++|.++-.+++. +++|+|||+.+-. .... ...+|+++++|+..+... ..+||+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~--~~~~V~~~~~d~~~~~~~---~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLM--DTGQVTWLREDGFKFRPT---RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHH--TTTCEEEECSCTTTCCCC---SSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhc--cCCCeEEEeCccccccCC---CCCcCEEEE
Confidence 467999999999999999998865 6799999986511 1122 234799999999887653 267999999
Q ss_pred cCcccHHHHHHHHccccccC---eEEEEEEcC--CcHHHH----HHHHHHHHHhCCeEeEEeeeecCCCCCceEEEEEEe
Q 022962 199 RAVAEMRILAEYCLPLVRVG---GLFVAAKGH--DPQEEV----KNSERAVQLMGASLLQLCSVESQSPFGQRTAVVCLK 269 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~Lkpg---G~l~~~~g~--~~~~ei----~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~lv~~~k 269 (289)
....++..++..+.++|..+ +.++..+-. ...+++ ..+.+.+...|+.. .+. ..+-..+.+...|.++|
T Consensus 277 Dm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~-~l~-akhL~hdReEiTV~~rk 354 (375)
T 4auk_A 277 DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA-QIQ-ARQLYHDREEVTVHVRR 354 (375)
T ss_dssp CCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCE-EEE-EECCTTCSSEEEEEEEE
T ss_pred cCCCChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcch-hhe-ehhhccCCcEEEEEEEe
Confidence 97777777777666666655 555544432 222333 33455667788753 222 11112234555666665
Q ss_pred c
Q 022962 270 S 270 (289)
Q Consensus 270 ~ 270 (289)
.
T Consensus 355 ~ 355 (375)
T 4auk_A 355 I 355 (375)
T ss_dssp C
T ss_pred c
Confidence 4
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.56 E-value=2.4e-08 Score=88.25 Aligned_cols=120 Identities=13% Similarity=-0.025 Sum_probs=73.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+++.+|||||||+|.|+...+...+...|+|+|+...+...+... +..+. ++.....+++..... .+++|+|+|.
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~-~ii~~~~~~dv~~l~---~~~~DvVLSD 163 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGW-NLIRFKDKTDVFNME---VIPGDTLLCD 163 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTG-GGEEEECSCCGGGSC---CCCCSEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCC-ceEEeeCCcchhhcC---CCCcCEEEec
Confidence 457799999999999999888666777899999976432111100 01121 333344333222211 3689999997
Q ss_pred Cc--------ccH--HHHHHHHccccccC--eEEEEEEcCCcHHHHHHHHHHHHHhC
Q 022962 200 AV--------AEM--RILAEYCLPLVRVG--GLFVAAKGHDPQEEVKNSERAVQLMG 244 (289)
Q Consensus 200 ~~--------~~~--~~ll~~~~~~Lkpg--G~l~~~~g~~~~~ei~~~~~~l~~~g 244 (289)
.- +.. -.+++.+.++|+|| |.|++-.-....++..++.+.++..-
T Consensus 164 mApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F 220 (282)
T 3gcz_A 164 IGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKH 220 (282)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHH
T ss_pred CccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhc
Confidence 31 111 24688889999999 99987332111455555566665543
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.41 E-value=4.2e-06 Score=77.33 Aligned_cols=147 Identities=11% Similarity=0.042 Sum_probs=97.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHH-----cCC---CCEEEEeccccccCCC-CcCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSL-----TQL---LNVQIVRGRAETLGKD-VSFREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~-----~~l---~ni~~~~~d~~~~~~~-~~~~~~ 192 (289)
+.+||=||-|.|..+..+.+ ++..+|+.||+++..++.+++.... ... ++++++.+|...+-.. ....++
T Consensus 206 pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 57999999999998888775 4568999999999999999985321 111 3589999998765321 011357
Q ss_pred ceEEEEcCcc--------------cHHHHHHHHccccccCeEEEEEEc-CCcHHHHHHHHHHHHHhCCeEeEEeee--ec
Q 022962 193 YDVAVARAVA--------------EMRILAEYCLPLVRVGGLFVAAKG-HDPQEEVKNSERAVQLMGASLLQLCSV--ES 255 (289)
Q Consensus 193 fD~V~sn~~~--------------~~~~ll~~~~~~LkpgG~l~~~~g-~~~~~ei~~~~~~l~~~g~~~~~~~~~--~~ 255 (289)
||+|+..... -.+++++.+.+.|+|||.++.-.+ ....+.+..+.+.++..... +..... ..
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~-v~~~~~~~~V 363 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCP-VEFSKEIVCV 363 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSC-EEEEEEEECC
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCc-ceEeeEEEEe
Confidence 9999987321 136788999999999999987543 33345555566666665332 232211 12
Q ss_pred CCCCCceEEEEEEec
Q 022962 256 QSPFGQRTAVVCLKS 270 (289)
Q Consensus 256 ~~~~~~r~lv~~~k~ 270 (289)
|.-.+.+..+++.|+
T Consensus 364 PSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 364 PSYLELWVFYTVWKK 378 (381)
T ss_dssp GGGSSCEEEEEEEEC
T ss_pred cCCCCceeeeEEECC
Confidence 433456766666654
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.34 E-value=3e-06 Score=72.93 Aligned_cols=122 Identities=16% Similarity=0.050 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEec-cccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~-d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+|+||||++|.++...+......+|+|+|+-..--+. -...+.+|-+.|+|..+ |+..++. .++|.|+|
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~-----~~~Dtllc 150 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP-----EKCDTLLC 150 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC-----CCCSEEEE
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC-----ccccEEEE
Confidence 34779999999999999988877666789999996532100 00112345556999998 9877654 57999999
Q ss_pred cC--------ccc--HHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHH-HhCCeEe
Q 022962 199 RA--------VAE--MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQ-LMGASLL 248 (289)
Q Consensus 199 n~--------~~~--~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~-~~g~~~~ 248 (289)
.- ++. .-.+|+-+.++|++ |.|++-.-.....++.+..+.++ ..|-..+
T Consensus 151 DIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~fgg~lV 210 (267)
T 3p8z_A 151 DIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKHGGMLV 210 (267)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHHCCEEE
T ss_pred ecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHhCCEeE
Confidence 72 111 12377888899998 77776322223333333333333 4555444
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.32 E-value=4.4e-07 Score=80.75 Aligned_cols=119 Identities=13% Similarity=-0.007 Sum_probs=71.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
++.+||||||++|.|+-.++...+...|+|+|+...+...... ....+. ++.....++...... .+++|+|+|..
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~---~~~~DlVlsD~ 155 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMP---TEPSDTLLCDI 155 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSC---CCCCSEEEECC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecC---CCCcCEEeecC
Confidence 5889999999999999998876566789999997532100000 000111 333333332222111 36899999973
Q ss_pred ccc----------HHHHHHHHccccccC-eEEEEEEcCCcHHHHHHHHHHHHHhC
Q 022962 201 VAE----------MRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERAVQLMG 244 (289)
Q Consensus 201 ~~~----------~~~ll~~~~~~Lkpg-G~l~~~~g~~~~~ei~~~~~~l~~~g 244 (289)
-++ ...+++-+.++|+|| |.|++-.-....++..++...++..-
T Consensus 156 APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F 210 (300)
T 3eld_A 156 GESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRF 210 (300)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhC
Confidence 211 135688889999999 99987332212445555565565543
No 289
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.30 E-value=1.6e-06 Score=78.73 Aligned_cols=75 Identities=12% Similarity=0.103 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC---cCCCCceEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV---SFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~---~~~~~fD~V 196 (289)
++..++|..||.|.-+..++... |.++|+|+|.++.+++.++ ++..+++++++++..++.... ...+++|.|
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~----rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgI 132 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK----TIDDPRFSIIHGPFSALGEYVAERDLIGKIDGI 132 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT----TCCCTTEEEEESCGGGHHHHHHHTTCTTCEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----hhcCCcEEEEeCCHHHHHHHHHhcCCCCcccEE
Confidence 58899999999999999998774 7799999999999999884 233357999999988763210 112369999
Q ss_pred EEc
Q 022962 197 VAR 199 (289)
Q Consensus 197 ~sn 199 (289)
+.+
T Consensus 133 LfD 135 (347)
T 3tka_A 133 LLD 135 (347)
T ss_dssp EEE
T ss_pred EEC
Confidence 987
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.29 E-value=3.1e-06 Score=73.82 Aligned_cols=112 Identities=15% Similarity=-0.022 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHCCC----CEEEEEe--CChHHHHHHHHHHHHcCCCCEEEEec-cccccCCCCcCCC
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLAIACPD----WKVTLLE--SMNKRCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFRE 191 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la~~~p~----~~V~~iD--~s~~~l~~a~~~~~~~~l~ni~~~~~-d~~~~~~~~~~~~ 191 (289)
++++.+|+|+||+.|.|+...+...+- +.|+|+| +.+-.. ...|..=+.+.++ |+.++.. .
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~~-----~ 138 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKPS-----E 138 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSCC-----C
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCCC-----C
Confidence 446899999999999999998765222 3455555 211000 0012111466667 9987542 5
Q ss_pred CceEEEEcC--------cc---cHHHHHHHHccccccCe-EEEEEEcCCcHHHHHHHHHHHHHh
Q 022962 192 QYDVAVARA--------VA---EMRILAEYCLPLVRVGG-LFVAAKGHDPQEEVKNSERAVQLM 243 (289)
Q Consensus 192 ~fD~V~sn~--------~~---~~~~ll~~~~~~LkpgG-~l~~~~g~~~~~ei~~~~~~l~~~ 243 (289)
++|+|+|.. ++ .+. .++-+.++|+||| .|++=.-....+++.+..+.++..
T Consensus 139 ~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~ 201 (269)
T 2px2_A 139 ISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRR 201 (269)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHH
Confidence 799999973 11 122 6778889999999 887632222235555544455443
No 291
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.28 E-value=7.9e-06 Score=75.83 Aligned_cols=102 Identities=9% Similarity=0.013 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCChHHHHHHHH-----------------CCCCEEEEEeCC-----------hHHHHHHHHHHHHcCC-CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA-----------------CPDWKVTLLESM-----------NKRCVFLEHAVSLTQL-LN 172 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~-----------------~p~~~V~~iD~s-----------~~~l~~a~~~~~~~~l-~n 172 (289)
..+|+|+|||+|..++.+... .|..+|+..|+- +...+.+ .+..|. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~---~~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNL---EKENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHH---HHHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhh---hhhccCCCC
Confidence 468999999999999887655 367899999986 3332222 122332 13
Q ss_pred EEEEeccccccCCCCcCCCCceEEEEcC-----------cc--------------------------------cHHHHHH
Q 022962 173 VQIVRGRAETLGKDVSFREQYDVAVARA-----------VA--------------------------------EMRILAE 209 (289)
Q Consensus 173 i~~~~~d~~~~~~~~~~~~~fD~V~sn~-----------~~--------------------------------~~~~ll~ 209 (289)
-.|+.+....+-.....+++||+|+|+. +. ++..+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566666655422212358999999983 10 1233477
Q ss_pred HHccccccCeEEEEEEc
Q 022962 210 YCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 210 ~~~~~LkpgG~l~~~~g 226 (289)
...+.|+|||++++..+
T Consensus 210 ~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 210 IHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHhccCCeEEEEEe
Confidence 77899999999998764
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.28 E-value=3.5e-06 Score=74.80 Aligned_cols=123 Identities=16% Similarity=0.030 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEec-cccccCCCCcCCCCceEEEE
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~-d~~~~~~~~~~~~~fD~V~s 198 (289)
+++.+||||||++|.++...+......+|+|+|+-..--+. -...+.++-..|.+..+ |+..++. .++|+|+|
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~~-----~~~D~ivc 166 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRPS-----ECCDTLLC 166 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSCC-----CCCSEEEE
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCCC-----CCCCEEEE
Confidence 34779999999999999987776666689999996531000 00001222223888887 8877654 56999999
Q ss_pred cC--------ccc--HHHHHHHHccccccC-eEEEEEEcCCcHHHHHHHHHHH-HHhCCeEe
Q 022962 199 RA--------VAE--MRILAEYCLPLVRVG-GLFVAAKGHDPQEEVKNSERAV-QLMGASLL 248 (289)
Q Consensus 199 n~--------~~~--~~~ll~~~~~~Lkpg-G~l~~~~g~~~~~ei~~~~~~l-~~~g~~~~ 248 (289)
.- ++. .-.+|+-+.++|++| |.|++-.-....+++.+..+.+ ...|-.++
T Consensus 167 DigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~fgg~lv 228 (321)
T 3lkz_A 167 DIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYGGGLV 228 (321)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHHHCCEEE
T ss_pred ECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHHhCCEeE
Confidence 72 111 123777888999999 8887633223334443333333 34555444
No 293
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.24 E-value=1.2e-06 Score=70.05 Aligned_cols=82 Identities=16% Similarity=0.123 Sum_probs=57.8
Q ss_pred CCeEEEEcCCCC-hHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE-Ec
Q 022962 122 NLKLVDVGTGAG-LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV-AR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G-~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~-sn 199 (289)
+.+|||||||+| ..+..||.. .+..|+++|+++.+++ +++.|+.+.... .-+.||+|. .|
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------------~v~dDiF~P~~~--~Y~~~DLIYsir 97 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------------IVRDDITSPRME--IYRGAALIYSIR 97 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------------EECCCSSSCCHH--HHTTEEEEEEES
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------------eEEccCCCCccc--ccCCcCEEEEcC
Confidence 579999999999 499999864 3689999999987654 888999874321 114799995 57
Q ss_pred CcccHHHHHHHHccccccCeEEEE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~ 223 (289)
...++...+-++.+.+ |.-+++
T Consensus 98 PP~El~~~i~~lA~~v--~adliI 119 (153)
T 2k4m_A 98 PPAEIHSSLMRVADAV--GARLII 119 (153)
T ss_dssp CCTTTHHHHHHHHHHH--TCEEEE
T ss_pred CCHHHHHHHHHHHHHc--CCCEEE
Confidence 6665554444444333 455554
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.22 E-value=1.7e-06 Score=76.72 Aligned_cols=73 Identities=16% Similarity=0.096 Sum_probs=59.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-c-CCCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-S-FREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~-~~~~fD~V~s 198 (289)
+++.++|.+||.|..+..++.. +++|+|+|.|+.+++.+++ .+. +++++++++..++.... . ..++||.|++
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 4789999999999999999976 6899999999999999987 543 58999999998874210 0 1147999998
Q ss_pred c
Q 022962 199 R 199 (289)
Q Consensus 199 n 199 (289)
+
T Consensus 96 D 96 (285)
T 1wg8_A 96 D 96 (285)
T ss_dssp E
T ss_pred C
Confidence 5
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.17 E-value=4.1e-05 Score=74.04 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=91.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC-------------CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC-------------PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~-------------p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~ 187 (289)
++.+|+|-+||||.+.+...... ....++|+|+++.+...|+.|.--.|.+.-.+.++|....+...
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE 296 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh
Confidence 47799999999999877654321 13579999999999999999988888766667777765543211
Q ss_pred -cCCCCceEEEEcCc-------------------cc-HHHHHHHHccccc-------cCeEEEEEEcCC------cHHHH
Q 022962 188 -SFREQYDVAVARAV-------------------AE-MRILAEYCLPLVR-------VGGLFVAAKGHD------PQEEV 233 (289)
Q Consensus 188 -~~~~~fD~V~sn~~-------------------~~-~~~ll~~~~~~Lk-------pgG~l~~~~g~~------~~~ei 233 (289)
....+||+|++|+. .+ --.+++.+.+.|| +||++.++.+.. ....+
T Consensus 297 ~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~i 376 (530)
T 3ufb_A 297 MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARI 376 (530)
T ss_dssp CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHH
T ss_pred hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHHH
Confidence 11257999999930 01 1234555555554 799999876421 12223
Q ss_pred HHHHHHHHHhCCeEeEEeeeecC--CC--CCceEEEEEEecCCC
Q 022962 234 KNSERAVQLMGASLLQLCSVESQ--SP--FGQRTAVVCLKSRRT 273 (289)
Q Consensus 234 ~~~~~~l~~~g~~~~~~~~~~~~--~~--~~~r~lv~~~k~~~~ 273 (289)
.+.+-+. +.+..+..++.- .+ .-.-.+++++|.+++
T Consensus 377 ---Rk~Lle~-~~l~aII~LP~~~F~~~tgi~t~Il~~~K~~~~ 416 (530)
T 3ufb_A 377 ---KEELLKN-FNLHTIVRLPEGVFAPYTDIAGNLLFFDRSGPT 416 (530)
T ss_dssp ---HHHHHHH-SEEEEEEECCTTTTTTTCCCCEEEEEEESSSCC
T ss_pred ---HHHHhhc-CEEEEEEECCcccCcCCCCCcEEEEEEECCCCC
Confidence 3333333 345555544311 11 123457777776543
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.12 E-value=4.6e-06 Score=77.24 Aligned_cols=105 Identities=12% Similarity=0.076 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCChHHHHHHH--------HC-------CCCEEEEEeCChHHHHHHHHHHHHcC-----------C-CCEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAI--------AC-------PDWKVTLLESMNKRCVFLEHAVSLTQ-----------L-LNVQ 174 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~--------~~-------p~~~V~~iD~s~~~l~~a~~~~~~~~-----------l-~ni~ 174 (289)
..+|+|+|||+|..++.+.. .+ |..+|+..|+-...-...=....... . .+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 67999999999999988721 21 67788888865543222211111100 0 0112
Q ss_pred EEeccccccCCCCcCCCCceEEEEcC-----------cc-------------------------------cHHHHHHHHc
Q 022962 175 IVRGRAETLGKDVSFREQYDVAVARA-----------VA-------------------------------EMRILAEYCL 212 (289)
Q Consensus 175 ~~~~d~~~~~~~~~~~~~fD~V~sn~-----------~~-------------------------------~~~~ll~~~~ 212 (289)
++.+....+-.....+++||+|+|+. +. ++..+++...
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333211111257999999982 10 4566888999
Q ss_pred cccccCeEEEEEEc
Q 022962 213 PLVRVGGLFVAAKG 226 (289)
Q Consensus 213 ~~LkpgG~l~~~~g 226 (289)
+.|+|||++++...
T Consensus 213 ~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 213 AEVKRGGAMFLVCL 226 (374)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEe
Confidence 99999999998753
No 297
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.07 E-value=7.8e-05 Score=66.97 Aligned_cols=140 Identities=15% Similarity=0.115 Sum_probs=86.4
Q ss_pred CeEEEEcCCCChHHHHHH----HHCCCC--EEEEEeCCh--------H-HHHHHHHHHHHc---CCCC--EEEEeccccc
Q 022962 123 LKLVDVGTGAGLPGLVLA----IACPDW--KVTLLESMN--------K-RCVFLEHAVSLT---QLLN--VQIVRGRAET 182 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la----~~~p~~--~V~~iD~s~--------~-~l~~a~~~~~~~---~l~n--i~~~~~d~~~ 182 (289)
-+|||+|-|+|...+... +..|.. +++.+|..+ . .-+..+...... .-.+ +++..+|+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 579999999999765432 234554 456677521 1 111222222221 1123 5677899877
Q ss_pred cCCCCcCCCCceEEEEcCccc-------HHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEeeeec
Q 022962 183 LGKDVSFREQYDVAVARAVAE-------MRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLCSVES 255 (289)
Q Consensus 183 ~~~~~~~~~~fD~V~sn~~~~-------~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~~~~~ 255 (289)
.-... ...+||+|+-.++++ -..+++.++++++|||+|+-+... .. +.+.|..+||.+.+..
T Consensus 178 ~l~~l-~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa---g~---VRR~L~~aGF~V~k~~---- 246 (308)
T 3vyw_A 178 RIKEV-ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSS---LS---VRKSLLTLGFKVGSSR---- 246 (308)
T ss_dssp HGGGC-CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCC---HH---HHHHHHHTTCEEEEEE----
T ss_pred HHhhh-cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCc---HH---HHHHHHHCCCEEEecC----
Confidence 43221 124799999987542 268999999999999999854332 23 3446779999877664
Q ss_pred CCCCCceEEEEEEecCCCC
Q 022962 256 QSPFGQRTAVVCLKSRRTP 274 (289)
Q Consensus 256 ~~~~~~r~lv~~~k~~~~p 274 (289)
...+.|.+.+..+..+.|
T Consensus 247 -G~g~KReml~A~~~~~~~ 264 (308)
T 3vyw_A 247 -EIGRKRKGTVASLKAPVP 264 (308)
T ss_dssp -CC---CEEEEEESSSCCC
T ss_pred -CCCCCCceeEEecCCCCC
Confidence 456778888888765443
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.00 E-value=7.1e-06 Score=72.82 Aligned_cols=126 Identities=9% Similarity=-0.050 Sum_probs=95.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc-CCCCcCCCCceEEEEcC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYDVAVARA 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~-~~~~~~~~~fD~V~sn~ 200 (289)
+..+||+=+|||.+++.+.. ++.+++.+|.+++.++..++|++. .+++++++.|.... ........+||+|+...
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 55789999999999999765 468999999999999999998865 34799999997552 21001125799999985
Q ss_pred -c---ccHHHHHHHHcc--ccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 201 -V---AEMRILAEYCLP--LVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 201 -~---~~~~~ll~~~~~--~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
. ..+..+++.+.. .+.++|.+++..+.....++..+.+.++..|.++..+.
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~~~l~~e 224 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRIE 224 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCCCeEEEE
Confidence 2 356666665554 45699999999988788888888888888887554443
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.92 E-value=2.1e-05 Score=70.32 Aligned_cols=47 Identities=11% Similarity=0.007 Sum_probs=41.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcC
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ 169 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~ 169 (289)
++..|||++||+|..++.++.. +.+++|+|+++.+++.|+++++...
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 4789999999999999887754 5799999999999999999988753
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.89 E-value=0.00027 Score=62.79 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=71.7
Q ss_pred CCCCCeEEEEcC------CCChHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCC
Q 022962 119 CNSNLKLVDVGT------GAGLPGLVLAIACPD-WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFRE 191 (289)
Q Consensus 119 ~~~~~~VLDiGc------G~G~~~l~la~~~p~-~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~ 191 (289)
.+.+.+|||+|+ -.|. ..+.+..|. +.|+++|+.+-. ...++ ++++|..++.. ..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~-----------sda~~-~IqGD~~~~~~----~~ 168 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV-----------SDADS-TLIGDCATVHT----AN 168 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB-----------CSSSE-EEESCGGGEEE----SS
T ss_pred ecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc-----------cCCCe-EEEcccccccc----CC
Confidence 345899999997 4454 345556776 699999997632 11234 48999876543 37
Q ss_pred CceEEEEcC---------cc------cHHHHHHHHccccccCeEEEEE--EcCCcHHHHHHHHHHHHHhCCeEeEEe
Q 022962 192 QYDVAVARA---------VA------EMRILAEYCLPLVRVGGLFVAA--KGHDPQEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 192 ~fD~V~sn~---------~~------~~~~ll~~~~~~LkpgG~l~~~--~g~~~~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
+||+|+|.. .+ -.+.+++-+.+.|+|||.|++= .|.. .+.+.+ +++ -|+.+.+.
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg-~~~L~~----lrk-~F~~VK~f 239 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW-NADLYK----LMG-HFSWWTAF 239 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC-CHHHHH----HHT-TEEEEEEE
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC-HHHHHH----HHh-hCCeEEEE
Confidence 899999972 11 1466778888999999999863 3554 333333 222 66666555
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.85 E-value=0.00013 Score=66.74 Aligned_cols=120 Identities=12% Similarity=0.186 Sum_probs=77.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCC-CCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFR-EQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~-~~fD~V~sn 199 (289)
..+|+|+.||+|.+++.+....- ...|.++|+++.+++..+.|.. +..++++|+.++... ... ..+|+|+..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~-~~~~~~~D~l~~g 75 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLE-EFDRLSFDMILMS 75 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHH-HHHHHCCSEEEEC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHh-HcCcCCcCEEEEc
Confidence 35899999999999999887621 1369999999999999888753 345678999887431 111 168999987
Q ss_pred Cc-------------cc-----HHHHHHHHccccc--cCeEEEEEE--cCCcHHHHHHHHHHHHHhCCeEeE
Q 022962 200 AV-------------AE-----MRILAEYCLPLVR--VGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 200 ~~-------------~~-----~~~ll~~~~~~Lk--pgG~l~~~~--g~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
.. .+ +..+++ +...++ |. .++++- |-........+.+.+++.|+.+..
T Consensus 76 pPCq~fS~ag~~~g~~d~r~~l~~~~~~-~i~~~~~~P~-~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 76 PPCQPFTRIGRQGDMTDSRTNSFLHILD-ILPRLQKLPK-YILLENVKGFEVSSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp CC------------------CHHHHHHH-HGGGCSSCCS-EEEEEEETTGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred CCCcchhhcCCcCCccCccchHHHHHHH-HHHHhcCCCC-EEEEeCCccccCHHHHHHHHHHHHHCCCeeEE
Confidence 31 11 122333 333455 65 444432 322334566677888899987654
No 302
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.85 E-value=1.1e-05 Score=74.26 Aligned_cols=105 Identities=13% Similarity=0.166 Sum_probs=70.3
Q ss_pred CCeEEEEcCCCChHHHHHHHH----------------CCCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA----------------CPDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLG 184 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~----------------~p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~ 184 (289)
..+|+|+||++|..++.+... .|..+|+..|.-...-..+-........ .+-.|+.+....+-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 458999999999887765432 4678999999877665555443322111 12355566555532
Q ss_pred CCCcCCCCceEEEEcC-----------c--------------------------ccHHHHHHHHccccccCeEEEEEEc
Q 022962 185 KDVSFREQYDVAVARA-----------V--------------------------AEMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 185 ~~~~~~~~fD~V~sn~-----------~--------------------------~~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
.....++++|+|+|+. + .++..+|+...+.|+|||++++..+
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 2212357999999982 0 1456778999999999999998763
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.41 E-value=0.00027 Score=64.79 Aligned_cols=60 Identities=20% Similarity=0.231 Sum_probs=50.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG 184 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~ 184 (289)
+..|||||.|.|.++..|+......+|++||++...+..+++.. . .+|++++++|+.++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCccchh
Confidence 57899999999999999997544568999999999999998865 2 358999999997653
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.36 E-value=0.0039 Score=57.56 Aligned_cols=116 Identities=13% Similarity=0.024 Sum_probs=75.2
Q ss_pred CeEEEEcCCCChHHHHHHHHCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-----CCCCceEE
Q 022962 123 LKLVDVGTGAGLPGLVLAIACPDW-KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-----FREQYDVA 196 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~p~~-~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-----~~~~fD~V 196 (289)
.+++|+.||+|.+++.+... +. .|.++|+++.+++..+.|. .+..++++|+.++..... ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 47999999999999998876 34 4679999999988887763 356788999988743210 12579999
Q ss_pred EEcCc------------cc-HHHHHHH---HccccccCeEEEEEE--cC---CcHHHHHHHHHHHHHhCCeE
Q 022962 197 VARAV------------AE-MRILAEY---CLPLVRVGGLFVAAK--GH---DPQEEVKNSERAVQLMGASL 247 (289)
Q Consensus 197 ~sn~~------------~~-~~~ll~~---~~~~LkpgG~l~~~~--g~---~~~~ei~~~~~~l~~~g~~~ 247 (289)
+.... .+ ...++.+ +...++|. .++++- |. .....+..+. .+...|+.+
T Consensus 76 ~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~-~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 76 IGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL-FFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp EECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS-EEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred EecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC-EEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 98631 11 1122222 22345675 344443 21 2233456666 788999987
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.36 E-value=0.00026 Score=61.95 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=40.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCC
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQL 170 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l 170 (289)
.++..|||..||||..++..++. +.+++|+|+++.+++.++++++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 35889999999999988886654 67999999999999999999886653
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.33 E-value=0.00065 Score=63.50 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=52.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHH-HHCCC-CEEEEEeCChHHHHHHHHHHHH---cCC-CCEEEEecccc
Q 022962 119 CNSNLKLVDVGTGAGLPGLVLA-IACPD-WKVTLLESMNKRCVFLEHAVSL---TQL-LNVQIVRGRAE 181 (289)
Q Consensus 119 ~~~~~~VLDiGcG~G~~~l~la-~~~p~-~~V~~iD~s~~~l~~a~~~~~~---~~l-~ni~~~~~d~~ 181 (289)
++++..++|||++.|..++.++ +..+. .+|+++|+++...+.+++|.+. ++. +|+++++.-+-
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 4568899999999999999888 55654 7999999999999999999987 345 67887765443
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.29 E-value=0.0077 Score=54.48 Aligned_cols=116 Identities=13% Similarity=0.065 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
+.+++|+.||+|.+++.+... ....|.++|+++.+++..+.|.... . ++|+.++.... . ..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~----~---~~Di~~~~~~~-~-~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK----P---EGDITQVNEKT-I-PDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC----C---BSCGGGSCGGG-S-CCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC----C---cCCHHHcCHhh-C-CCCCEEEECCC
Confidence 578999999999999888765 3345889999999999988876422 1 68888875421 1 3599999862
Q ss_pred ------------ccc-----HHHHHHHHccccccCeEEEEEE--cC---CcHHHHHHHHHHHHHhCCeEeE
Q 022962 201 ------------VAE-----MRILAEYCLPLVRVGGLFVAAK--GH---DPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 201 ------------~~~-----~~~ll~~~~~~LkpgG~l~~~~--g~---~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
..+ +..+++.+ +.++|. .++++- |. .....+..+.+.++..|+.+..
T Consensus 81 CQ~fS~ag~~~g~~d~r~~L~~~~~r~i-~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 81 CQAFSISGKQKGFEDSRGTLFFDIARIV-REKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp CTTTCTTSCCCGGGSTTSCHHHHHHHHH-HHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred CCCcchhcccCCCcchhhHHHHHHHHHH-HhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 111 12333322 335775 444543 21 1234566777888899986543
No 308
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.05 E-value=0.0081 Score=54.50 Aligned_cols=121 Identities=10% Similarity=0.051 Sum_probs=75.9
Q ss_pred CeEEEEcCCCChHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC-
Q 022962 123 LKLVDVGTGAGLPGLVLAIACPD-WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA- 200 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~p~-~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~- 200 (289)
.+++|+.||.|.+++.+....-. .-|.++|+++.+++..+.|.. +..++++|+.++.........+|+++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 47999999999998888766322 347899999999888777642 34467889988753211113689999761
Q ss_pred ------------ccc-----HHHHHHHHccccc-cCeEEEEEE--cCCcHHHHHHHHHHHHHhCCeEeEE
Q 022962 201 ------------VAE-----MRILAEYCLPLVR-VGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 201 ------------~~~-----~~~ll~~~~~~Lk-pgG~l~~~~--g~~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
..+ +..+++.+ +.++ |. .++++- |.........+.+.+++.|+.+...
T Consensus 79 CQ~fS~ag~~~~~~d~r~~L~~~~~r~i-~~~~~P~-~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~ 146 (333)
T 4h0n_A 79 CQPFTRNGKYLDDNDPRTNSFLYLIGIL-DQLDNVD-YILMENVKGFENSTVRNLFIDKLKECNFIYQEF 146 (333)
T ss_dssp CCCSEETTEECCTTCTTSCCHHHHHHHG-GGCTTCC-EEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEE
T ss_pred CcchhhhhhccCCcCcccccHHHHHHHH-HHhcCCC-EEEEecchhhhhhhHHHHHHHHHHhCCCeEEEE
Confidence 111 23344333 3344 64 344443 2122334566778888999876543
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.97 E-value=0.015 Score=52.55 Aligned_cols=121 Identities=2% Similarity=-0.125 Sum_probs=75.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC-CCCEE-EEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC-PDWKV-TLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~-p~~~V-~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
..+++|+.||.|.+++.+.... +...| .++|+++.+++..+.|... . ++++|+.++.........+|+++..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEec
Confidence 4689999999999988887652 12345 6999999999888887532 1 5678888775321111268999965
Q ss_pred ----Cc-----------cc-HHHHHHHHcc-c---c--ccCeEEEEEE--cCCcHHHHHHHHHHHHHhCCeEeE
Q 022962 200 ----AV-----------AE-MRILAEYCLP-L---V--RVGGLFVAAK--GHDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 200 ----~~-----------~~-~~~ll~~~~~-~---L--kpgG~l~~~~--g~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
++ .+ ...++.++.+ + + +|. .++++- |-........+.+.+++.|+.+..
T Consensus 84 pPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 84 PPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIENVPLFKESLVFKEIYNILIKNQYYIKD 156 (327)
T ss_dssp CCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGGGSHHHHHHHHHHHHTTCEEEE
T ss_pred CCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEEchhhhcChHHHHHHHHHHHhCCCEEEE
Confidence 22 12 1234444444 3 4 454 334442 222234566677888899997654
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.87 E-value=0.00046 Score=63.94 Aligned_cols=98 Identities=15% Similarity=0.052 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc-CC---CCcCCCCce
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GK---DVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~-~~---~~~~~~~fD 194 (289)
+++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.++ ++|.+ ++..+-.++ .. .......||
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~---~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGFE---TIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTCE---EEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCc---EEcCCCcchHHHHHHHHhCCCCCC
Confidence 3588999999876 777778887764449999999998877664 45652 332211111 00 000113699
Q ss_pred EEEEcCccc------------HHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAE------------MRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~------------~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-..-.. ....++.+.+.|++||++++.
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 999653221 234677788899999998753
No 311
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.75 E-value=0.095 Score=46.76 Aligned_cols=115 Identities=16% Similarity=0.150 Sum_probs=75.1
Q ss_pred eEEEEcCCCChHHHHHHHHCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC--
Q 022962 124 KLVDVGTGAGLPGLVLAIACPDW-KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA-- 200 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~p~~-~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~-- 200 (289)
+|+|+-||.|.+++.+.++ +. -|.++|+++.+++..+.|. + -.++++|+.++.... . ...|+++...
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~---~---~~~~~~DI~~i~~~~-~-~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH---S---AKLIKGDISKISSDE-F-PKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC---C---SEEEESCGGGCCGGG-S-CCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC---C---CCcccCChhhCCHhh-C-CcccEEEecCCC
Confidence 6999999999988887655 34 4679999999988877752 1 356789999886532 2 3689998762
Q ss_pred -----------cccH-HHHHHH---HccccccCeEEEEEEc-----CCcHHHHHHHHHHHHHhCCeEeE
Q 022962 201 -----------VAEM-RILAEY---CLPLVRVGGLFVAAKG-----HDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 201 -----------~~~~-~~ll~~---~~~~LkpgG~l~~~~g-----~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
..+. ..++.+ +.+.++|. .++++-- ....+.+..+.+.+...|+.+..
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 139 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHI 139 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEE
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcEEEE
Confidence 1111 122222 23346776 4445531 23345677788888999987543
No 312
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.74 E-value=0.0035 Score=62.23 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=80.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHC-------CC-----CEEEEEeCChHHHHHHHH--------------HHHHc-----C-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC-------PD-----WKVTLLESMNKRCVFLEH--------------AVSLT-----Q- 169 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~-------p~-----~~V~~iD~s~~~l~~a~~--------------~~~~~-----~- 169 (289)
.-+|+|+|.|+|...+.+.+.. |. .+++.+|..+-..+.+++ ..+.. |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4589999999999888875542 21 679999994433333322 11111 1
Q ss_pred ----CC----CEEEEeccccccCCCCc--CCCCceEEEEcCccc-------HHHHHHHHccccccCeEEEEEEcCCcHHH
Q 022962 170 ----LL----NVQIVRGRAETLGKDVS--FREQYDVAVARAVAE-------MRILAEYCLPLVRVGGLFVAAKGHDPQEE 232 (289)
Q Consensus 170 ----l~----ni~~~~~d~~~~~~~~~--~~~~fD~V~sn~~~~-------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e 232 (289)
++ .++++.+|+.+.-.... ....||+++..++++ -..++..+.++++|||.+.-.... ..
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~---~~ 215 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA---GF 215 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC---HH
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc---HH
Confidence 11 36788899977432210 136799999986542 278899999999999998753322 23
Q ss_pred HHHHHHHHHHhCCeEeEEe
Q 022962 233 VKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 233 i~~~~~~l~~~g~~~~~~~ 251 (289)
+.+.+.+.||.+....
T Consensus 216 ---vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 216 ---VRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ---HHHHHHHTTCEEEEEE
T ss_pred ---HHHHHHhCCeEEEecc
Confidence 3446778999877664
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.69 E-value=0.0018 Score=59.28 Aligned_cols=98 Identities=12% Similarity=0.164 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceE
Q 022962 119 CNSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDV 195 (289)
Q Consensus 119 ~~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~ 195 (289)
++++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.+++ +|.+. ++..+-.++... ....+.||+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGATH--VINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCCE--EecCCccCHHHHHHHhcCCCCcE
Confidence 45688999999876 6777777776544489999999998877754 46532 222211111000 001136999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-..-. ...++.+.+.|+++|++++.
T Consensus 262 vid~~g~--~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGS--PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCC--HHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCC--HHHHHHHHHHHhcCCEEEEe
Confidence 9865422 34567778899999998864
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.61 E-value=0.0017 Score=60.02 Aligned_cols=97 Identities=15% Similarity=0.061 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccc-----ccCCCCcCCCCc
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE-----TLGKDVSFREQY 193 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~-----~~~~~~~~~~~f 193 (289)
+++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.+++ +|.+ ++..+-. .+... .....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~i~~~~~~~~~~~v~~~-t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFE---IADLSLDTPLHEQIAAL-LGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCE---EEETTSSSCHHHHHHHH-HSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCCc---EEccCCcchHHHHHHHH-hCCCCC
Confidence 3588999999865 6777778877654589999999998877754 5652 2321111 11000 012369
Q ss_pred eEEEEcCccc-------------HHHHHHHHccccccCeEEEEE
Q 022962 194 DVAVARAVAE-------------MRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 194 D~V~sn~~~~-------------~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+|+-..-.. ....++.+.++|++||++++.
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 9999653211 234677888899999998764
No 315
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.56 E-value=0.0036 Score=56.89 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecc---ccccCCC--CcCCCCce
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR---AETLGKD--VSFREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d---~~~~~~~--~~~~~~fD 194 (289)
++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.++ ++|.+. ++..+ -.++... ....+.||
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~~i~~~~~~g~D 244 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----EIGADL--VLQISKESPQEIARKVEGQLGCKPE 244 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCSE--EEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCE--EEcCcccccchHHHHHHHHhCCCCC
Confidence 488999999875 666777777764449999999998877665 466642 22221 1111000 00014699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-..-. ...++.+.++|+++|+++..
T Consensus 245 ~vid~~g~--~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 245 VTIECTGA--EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp EEEECSCC--HHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCC--hHHHHHHHHHhcCCCEEEEE
Confidence 99865432 23566677899999998864
No 316
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.51 E-value=0.0031 Score=57.05 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEE
Q 022962 119 CNSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVA 196 (289)
Q Consensus 119 ~~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V 196 (289)
++++.+||=+|+|+ |..++.+|+...+.+|+++|.+++.++.+++ +|.+.+--...+..+ +.. ......+|+|
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~v~~-~t~g~g~d~v 243 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADAAVKSGAGAADAIRE-LTGGQGATAV 243 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSEEEECSTTHHHHHHH-HHGGGCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEEcCCCcHHHHHHH-HhCCCCCeEE
Confidence 34588999999865 6666777777667899999999998877754 665432111111111 100 0012379999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+-..-. ...++.+.+.|+++|++++.
T Consensus 244 ~d~~G~--~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 244 FDFVGA--QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EESSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCC--HHHHHHHHHHHhcCCEEEEE
Confidence 865322 24667777899999999864
No 317
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.50 E-value=0.0064 Score=55.00 Aligned_cols=88 Identities=14% Similarity=0.115 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+||-+|+|+ |..++.+|+.. +++|+++|.+++..+.+++ +|.+.+ + .+.+.+ .+.+|+|+-.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--~-~~~~~~------~~~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS----MGVKHF--Y-TDPKQC------KEELDFIIST 241 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH----TTCSEE--E-SSGGGC------CSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh----cCCCee--c-CCHHHH------hcCCCEEEEC
Confidence 588999999865 66666777766 5699999999988776654 676433 2 343332 2379999965
Q ss_pred CcccHHHHHHHHccccccCeEEEEE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.-.. ..++.+.+.|+++|++++.
T Consensus 242 ~g~~--~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 242 IPTH--YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp CCSC--CCHHHHHTTEEEEEEEEEC
T ss_pred CCcH--HHHHHHHHHHhcCCEEEEE
Confidence 3221 1355667899999999875
No 318
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.33 E-value=0.084 Score=52.04 Aligned_cols=124 Identities=18% Similarity=0.171 Sum_probs=80.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC-------C-----CCEEEEEeC---ChHHHHHHH-----------HHHHHc-----CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC-------P-----DWKVTLLES---MNKRCVFLE-----------HAVSLT-----QL 170 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~-------p-----~~~V~~iD~---s~~~l~~a~-----------~~~~~~-----~l 170 (289)
.-+|+|+|-|+|...+...+.. | ..+++++|. +.+.+..+- +..+.. |.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999887765432 2 256999998 666655221 112111 10
Q ss_pred ---------CCEEEEeccccccCCCC--cCCCCceEEEEcCccc-------HHHHHHHHccccccCeEEEEEEcCCcHHH
Q 022962 171 ---------LNVQIVRGRAETLGKDV--SFREQYDVAVARAVAE-------MRILAEYCLPLVRVGGLFVAAKGHDPQEE 232 (289)
Q Consensus 171 ---------~ni~~~~~d~~~~~~~~--~~~~~fD~V~sn~~~~-------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e 232 (289)
-.+++..+|+.+.-... .....||+++..++++ -..+++.+.++++|||.+.-.... ..
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~---~~ 223 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA---GF 223 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC---HH
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc---HH
Confidence 12566778887643211 1135799999986542 368899999999999998753322 23
Q ss_pred HHHHHHHHHHhCCeEeEEe
Q 022962 233 VKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 233 i~~~~~~l~~~g~~~~~~~ 251 (289)
+.+.+.+.||.+....
T Consensus 224 ---vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 224 ---VRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ---HHHHHHHHTCEEEEEE
T ss_pred ---HHHHHHhCCeEEEecc
Confidence 3446678999877654
No 319
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.31 E-value=0.01 Score=53.45 Aligned_cols=96 Identities=16% Similarity=0.093 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEE
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAV 197 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~ 197 (289)
+++.+||-.|+|+ |..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +..+-+++.... ...+.+|+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~~--i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----LGAEVA--VNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTCSEE--EETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----cCCCEE--EeCCCcCHHHHHHHhCCCCCEEE
Confidence 3588999999976 77788888876 5699999999998877654 665422 221111111000 0013689998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-.... ...++.+.+.|+++|+++..
T Consensus 238 d~~g~--~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 238 VTAVS--PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ESSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred EeCCC--HHHHHHHHHHhccCCEEEEe
Confidence 66432 34667777899999998864
No 320
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.29 E-value=0.0054 Score=54.54 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=53.5
Q ss_pred CCEEEEeccccccCCCCcCCCCceEEEEcCc-----------------c-------cHHHHHHHHccccccCeEEEEEEc
Q 022962 171 LNVQIVRGRAETLGKDVSFREQYDVAVARAV-----------------A-------EMRILAEYCLPLVRVGGLFVAAKG 226 (289)
Q Consensus 171 ~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~-----------------~-------~~~~ll~~~~~~LkpgG~l~~~~g 226 (289)
.+++++++|..+.... ..+++||+|+++.. . .+..+++++.++|||||.++++.+
T Consensus 20 ~~~~i~~gD~~~~l~~-l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLAS-FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTT-SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhh-CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 4689999999884221 11378999999831 0 134677899999999999999887
Q ss_pred CCc------H-----HHHHHHHHHHHHhCCeEeEEe
Q 022962 227 HDP------Q-----EEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 227 ~~~------~-----~ei~~~~~~l~~~g~~~~~~~ 251 (289)
... . .-...+...+++.||......
T Consensus 99 d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~i 134 (297)
T 2zig_A 99 DVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPI 134 (297)
T ss_dssp CEEEECC----EEEECHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccccccCCcccccccHHHHHHHHHHcCCeeeccE
Confidence 532 0 011234456678899877644
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.28 E-value=0.0026 Score=57.77 Aligned_cols=97 Identities=11% Similarity=0.059 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
+++.+||=+|+|+ |..++.+|+.....+|+++|.+++.++.+++ +|.+. ++..+-.++.. .......+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGATD--IINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCCE--EECGGGSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCce--EEcCCCcCHHHHHHHHcCCCCCCE
Confidence 4588999999865 6666667766543489999999988777654 56542 22211111110 0011236999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-..-. ...++.+.+.|++||+++..
T Consensus 239 v~d~~g~--~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 239 VVIAGGD--VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEECSSC--TTHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC--hHHHHHHHHHHhcCCEEEEe
Confidence 9854322 13556667789999998853
No 322
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.21 E-value=0.019 Score=50.15 Aligned_cols=126 Identities=13% Similarity=0.048 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCChHHHHHHHH-------CCCCEEEEEe-----CChH-------------------HHHHHHHH------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA-------CPDWKVTLLE-----SMNK-------------------RCVFLEHA------ 164 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~-------~p~~~V~~iD-----~s~~-------------------~l~~a~~~------ 164 (289)
.+.|+++||-.|.-++.+|.. .+..+|++.| +... ..+..++.
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 568999999999988887643 3568999999 3210 01112221
Q ss_pred HHHcCC--CCEEEEeccccccCCCC---cCCCCceEEEEcCc--ccHHHHHHHHccccccCeEEEEEEcCC---cHHHHH
Q 022962 165 VSLTQL--LNVQIVRGRAETLGKDV---SFREQYDVAVARAV--AEMRILAEYCLPLVRVGGLFVAAKGHD---PQEEVK 234 (289)
Q Consensus 165 ~~~~~l--~ni~~~~~d~~~~~~~~---~~~~~fD~V~sn~~--~~~~~ll~~~~~~LkpgG~l~~~~g~~---~~~ei~ 234 (289)
.+.++. ++|+++.+++.+.-... ....+||+|+..+- ......++.+...|+|||.+++ .... ...+-+
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~-DD~~~~~w~G~~~ 228 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAF-DELDNPKWPGENI 228 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEE-SSTTCTTCTHHHH
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEE-cCCCCCCChHHHH
Confidence 123453 57999999998742110 01247999998863 3456778999999999999986 3221 223333
Q ss_pred HHHHHHHHhCCeEe
Q 022962 235 NSERAVQLMGASLL 248 (289)
Q Consensus 235 ~~~~~l~~~g~~~~ 248 (289)
.+.+.+...+..+.
T Consensus 229 A~~ef~~~~~~~i~ 242 (257)
T 3tos_A 229 AMRKVLGLDHAPLR 242 (257)
T ss_dssp HHHHHTCTTSSCCE
T ss_pred HHHHHHhhCCCeEE
Confidence 34444445565443
No 323
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.20 E-value=0.0067 Score=55.51 Aligned_cols=96 Identities=18% Similarity=0.117 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEec---cccc-cCCC-CcCCCCce
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG---RAET-LGKD-VSFREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~---d~~~-~~~~-~~~~~~fD 194 (289)
++.+||=+|+|+ |..++.+|+.....+|+++|.+++..+.+++ +|.+.+ +.. |+.+ +... ....+.+|
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~v--i~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGATAT--VDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSEE--ECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCEE--ECCCCcCHHHHHHhhhhccCCCCC
Confidence 588999999865 6666777777654599999999988777655 565422 221 1111 1100 00124799
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-..-. ...++.+.++|++||++++.
T Consensus 256 vvid~~G~--~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 256 VVIECAGV--AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEECSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC--HHHHHHHHHHhccCCEEEEE
Confidence 99865321 34567777899999999864
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.08 E-value=0.004 Score=51.45 Aligned_cols=94 Identities=10% Similarity=0.058 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCC--ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccc---ccCCCCcCCCCceE
Q 022962 121 SNLKLVDVGTGA--GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE---TLGKDVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGcG~--G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~---~~~~~~~~~~~fD~ 195 (289)
++.+||..|+++ |.....++... +.+|+++|.+++..+.++ .+|.+.+ +-..+.. .+... .....+|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~~~-~d~~~~~~~~~~~~~-~~~~~~D~ 110 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS----RLGVEYV-GDSRSVDFADEILEL-TDGYGVDV 110 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH----TTCCSEE-EETTCSTHHHHHHHH-TTTCCEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----HcCCCEE-eeCCcHHHHHHHHHH-hCCCCCeE
Confidence 478999999543 33333344333 579999999998776554 3454311 1111110 01000 01236999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+.++- ...++.+.+.|+++|+++..
T Consensus 111 vi~~~g---~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 111 VLNSLA---GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEECCC---THHHHHHHHTEEEEEEEEEC
T ss_pred EEECCc---hHHHHHHHHHhccCCEEEEE
Confidence 997753 24677788899999998864
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.05 E-value=0.012 Score=53.24 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecc-ccccCCC--CcC----CCC
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR-AETLGKD--VSF----REQ 192 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d-~~~~~~~--~~~----~~~ 192 (289)
++.+||-+|+|+ |..++.+|+.. +++|+++|.+++.++.++ .+|.+. ++..+ -.++... ... ...
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~--~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAK----NCGADV--TLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH----HTTCSE--EEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH----HhCCCE--EEcCcccccHHHHHHHHhccccCCC
Confidence 478999999864 55666677665 567999999998877765 466642 22211 0111000 000 146
Q ss_pred ceEEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 193 YDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 193 fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+|+-..-. ...++.+.+.|+++|+++..
T Consensus 241 ~D~vid~~g~--~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 241 PNVTIDCSGN--EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CSEEEECSCC--HHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCC--HHHHHHHHHHHhcCCEEEEE
Confidence 9999866432 23566677889999998864
No 326
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.92 E-value=0.01 Score=54.20 Aligned_cols=96 Identities=14% Similarity=0.034 Sum_probs=61.5
Q ss_pred CCCeEEEEc-CC-CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVG-TG-AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiG-cG-~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V~ 197 (289)
++.+||=.| +| .|..++.+|+...+.+|+++|.+++.++.+++ +|.+.+--...+..+ +.. ...+.+|+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~vi~~~~~~~~~v~~--~~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHHVIDHSKPLAAEVAA--LGLGAPAFVF 244 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSEEECTTSCHHHHHHT--TCSCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCCHHHHHHH--hcCCCceEEE
Confidence 477999998 44 36677777876457899999999988877754 665422110111111 111 0125799988
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-..-. ...++.+.++|+++|+++..
T Consensus 245 d~~g~--~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 245 STTHT--DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ECSCH--HHHHHHHHHHSCTTCEEEEC
T ss_pred ECCCc--hhhHHHHHHHhcCCCEEEEE
Confidence 65322 24566777889999999865
No 327
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.89 E-value=0.0058 Score=55.74 Aligned_cols=95 Identities=18% Similarity=0.038 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
+++.+||=+|+|+ |..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +..+-.++.. .......+|+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----LGADHG--INRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----cCCCEE--EcCCcccHHHHHHHHhCCCCceE
Confidence 4588999999775 66666677765 5699999999988777654 565422 2222111110 0001237999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-..-. ..++.+.+.|+++|++++.
T Consensus 261 vid~~g~---~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 261 ILEIAGG---AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEETTS---SCHHHHHHHEEEEEEEEEE
T ss_pred EEECCCh---HHHHHHHHHhhcCCEEEEE
Confidence 9965332 2455666789999999865
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.86 E-value=0.015 Score=53.10 Aligned_cols=93 Identities=18% Similarity=0.148 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+||-+|+|+ |..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +..+-.+.... ..+.+|+|+-.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----lGa~~v--i~~~~~~~~~~--~~~g~Dvvid~ 264 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----LGADEV--VNSRNADEMAA--HLKSFDFILNT 264 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSEE--EETTCHHHHHT--TTTCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE--eccccHHHHHH--hhcCCCEEEEC
Confidence 588999999874 66666677765 5689999999988877754 565422 22111111110 11469999965
Q ss_pred CcccHHHHHHHHccccccCeEEEEE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.-.. ..++.+.+.|+++|+++..
T Consensus 265 ~g~~--~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 265 VAAP--HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CSSC--CCHHHHHTTEEEEEEEEEC
T ss_pred CCCH--HHHHHHHHHhccCCEEEEe
Confidence 3221 1345566899999998754
No 329
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.78 E-value=0.013 Score=52.77 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=59.9
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc-cccCCCCcCCCCceEEEE
Q 022962 122 NLKLVDVGTGA-GLPGLVLAIAC-PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA-ETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~~l~la~~~-p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~-~~~~~~~~~~~~fD~V~s 198 (289)
+.+||-+|+|+ |..++.+|+.. |+++|+++|.+++..+.+++ +|.+.+ +..+- .+..........+|+|+-
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~~~~~~~~~~~g~g~D~vid 244 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADYV--SEMKDAESLINKLTDGLGASIAID 244 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSEE--ECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCEE--eccccchHHHHHhhcCCCccEEEE
Confidence 78999999864 55556666654 36799999999988877754 565422 21111 111000001237999996
Q ss_pred cCcccHHHHHHHHccccccCeEEEEE
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
..-. ...++.+.+.|+++|+++..
T Consensus 245 ~~g~--~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 245 LVGT--EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp SSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCC--hHHHHHHHHHhhcCCEEEEe
Confidence 6432 23566777889999998864
No 330
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.77 E-value=0.01 Score=54.95 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
+++.+||=+|+|+ |..++.+|+.....+|+++|.+++.++.+++ +|.+. ++..+-.++.. .......+|+
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGADH--VIDPTKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSE--EECTTTSCHHHHHHHHTTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCE--EEcCCCCCHHHHHHHHhCCCCCCE
Confidence 4588999999854 5555667776654599999999998887754 56532 22221111100 0001236999
Q ss_pred EEEcC-cc--cHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARA-VA--EMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~-~~--~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-.. .. ....+++.+.+.++++|++++.
T Consensus 286 vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 286 FLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 99553 22 2333444333555999999864
No 331
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.75 E-value=0.014 Score=53.30 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc--cccCCC--CcCCCCce
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA--ETLGKD--VSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~--~~~~~~--~~~~~~fD 194 (289)
+++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.++ ++|.+.+ +..+- +++... ....+.+|
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~~~~~~g~D 264 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDF--VNPNDHSEPISQVLSKMTNGGVD 264 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEE--ECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HhCCceE--EeccccchhHHHHHHHHhCCCCC
Confidence 3588999999764 556666777764448999999998887765 4565422 21110 111000 00013699
Q ss_pred EEEEcCcccHHHHHHHHccccccC-eEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVG-GLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~Lkpg-G~l~~~ 224 (289)
+|+-..-. ...++.+.++|+++ |+++..
T Consensus 265 ~vid~~g~--~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 265 FSLECVGN--VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp EEEECSCC--HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCC--HHHHHHHHHHhhcCCcEEEEE
Confidence 99865422 34567778899999 998864
No 332
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.69 E-value=0.063 Score=48.19 Aligned_cols=79 Identities=15% Similarity=0.058 Sum_probs=55.0
Q ss_pred CEEEEeccccccCCCCcCCCCceEEEEcCc------------------ccHHHHHHHHccccccCeEEEEEEcCCc----
Q 022962 172 NVQIVRGRAETLGKDVSFREQYDVAVARAV------------------AEMRILAEYCLPLVRVGGLFVAAKGHDP---- 229 (289)
Q Consensus 172 ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~------------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~---- 229 (289)
+..++++|..+.-.. ..+++||+|+++.. ..+..+++++.++|+|||.+++..+...
T Consensus 14 ~~~ii~gD~~~~l~~-l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~ 92 (323)
T 1boo_A 14 NGSMYIGDSLELLES-FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV 92 (323)
T ss_dssp SEEEEESCHHHHGGG-SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE
T ss_pred CceEEeCcHHHHHhh-CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC
Confidence 578899998763211 11478999999831 1367888999999999999999887541
Q ss_pred ----HHHHHHHHHHHHHhCCeEeEEe
Q 022962 230 ----QEEVKNSERAVQLMGASLLQLC 251 (289)
Q Consensus 230 ----~~ei~~~~~~l~~~g~~~~~~~ 251 (289)
...+..+...++..||.+....
T Consensus 93 ~~~~~~~~~~i~~~~~~~Gf~~~~~i 118 (323)
T 1boo_A 93 PARSIYNFRVLIRMIDEVGFFLAEDF 118 (323)
T ss_dssp EEECCHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccccchHHHHHHHHHhCCCEEEEEE
Confidence 1223344455678899877644
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.64 E-value=0.022 Score=51.65 Aligned_cols=98 Identities=17% Similarity=0.068 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEec--cccccCC---CCcCCCCce
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG--RAETLGK---DVSFREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~--d~~~~~~---~~~~~~~fD 194 (289)
++.+||=+|+|+ |..++.+|+......|+++|.+++.++.+++. .-.-+.+... +-+++.. .......+|
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI----CPEVVTHKVERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH----CTTCEEEECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----chhcccccccccchHHHHHHHHHHhCCCCCC
Confidence 478999999865 66667777776444599999999998888764 1111222211 1111100 000124799
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-..-. ...++.+.++|++||++++.
T Consensus 255 vvid~~g~--~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 255 VALECTGV--ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp EEEECSCC--HHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCC--hHHHHHHHHHhcCCCEEEEE
Confidence 99865322 23566677899999999864
No 334
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.60 E-value=0.0067 Score=55.70 Aligned_cols=96 Identities=22% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecc---ccccCC---CCcCCCCc
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR---AETLGK---DVSFREQY 193 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d---~~~~~~---~~~~~~~f 193 (289)
++.+||-+|+|. |..++.+|+.....+|+++|.+++.++.++ ++|.+.+ +..+ -.++.. .......+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGADLT--LNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCCcEE--EeccccCcchHHHHHHHHhCCCCC
Confidence 488999999653 555566676654369999999998877765 4665422 2222 111100 00011369
Q ss_pred eEEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 194 DVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 194 D~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+|+-..-. ...++.+.+.|+++|+++..
T Consensus 269 Dvvid~~g~--~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 269 DFILEATGD--SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEEEECSSC--TTHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC--HHHHHHHHHHHhcCCEEEEE
Confidence 999966422 12455667789999998764
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.59 E-value=0.015 Score=52.99 Aligned_cols=98 Identities=13% Similarity=0.036 Sum_probs=61.0
Q ss_pred CCCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc--cccCCC--CcCCCCc
Q 022962 119 CNSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA--ETLGKD--VSFREQY 193 (289)
Q Consensus 119 ~~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~--~~~~~~--~~~~~~f 193 (289)
++++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.++ ++|.+.+ +..+- +++... ....+.+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATEC--LNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH----HcCCcEE--EecccccchHHHHHHHHhCCCC
Confidence 34588999999764 555666676654448999999998877765 4676422 21110 111000 0011369
Q ss_pred eEEEEcCcccHHHHHHHHccccccC-eEEEEE
Q 022962 194 DVAVARAVAEMRILAEYCLPLVRVG-GLFVAA 224 (289)
Q Consensus 194 D~V~sn~~~~~~~ll~~~~~~Lkpg-G~l~~~ 224 (289)
|+|+-..-. ...++.+.+.|+++ |+++..
T Consensus 263 Dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGR--IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCC--HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCC--HHHHHHHHHHHhcCCCEEEEE
Confidence 999865322 34567777899999 998764
No 336
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.55 E-value=0.033 Score=50.05 Aligned_cols=97 Identities=18% Similarity=0.044 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC-EEEEeccccc-cCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVGTGAG-LPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN-VQIVRGRAET-LGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiGcG~G-~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n-i~~~~~d~~~-~~~~~~~~~~fD~V~ 197 (289)
++.+||=+|+|++ ..++.+++...+.+|+++|.+++.++.+++ +|.+. +..-..|..+ +.. ......+|.++
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~-~t~g~g~d~~~ 237 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKK-ITGGLGVQSAI 237 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHH-HTTSSCEEEEE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhh-hcCCCCceEEE
Confidence 4889999999864 344555666667899999999988766554 56532 2111122211 110 01123577777
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-.... ...+..+.+.|+++|++++.
T Consensus 238 ~~~~~--~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 238 VCAVA--RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp ECCSC--HHHHHHHHHTEEEEEEEEEC
T ss_pred EeccC--cchhheeheeecCCceEEEE
Confidence 65433 34566777899999998754
No 337
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.45 E-value=0.024 Score=50.45 Aligned_cols=74 Identities=9% Similarity=0.009 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCCCCE-EEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcC-CCCceEEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACPDWK-VTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSF-REQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p~~~-V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~-~~~fD~V~s 198 (289)
.+.+++|+-||.|.+++.+....-... |.++|+++.+++..+.|. .+..++.+|+.++...... ...+|+++.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcCEEEe
Confidence 467999999999998888776522222 699999999888777653 2346778999887532100 136899997
Q ss_pred c
Q 022962 199 R 199 (289)
Q Consensus 199 n 199 (289)
.
T Consensus 90 g 90 (295)
T 2qrv_A 90 G 90 (295)
T ss_dssp C
T ss_pred c
Confidence 6
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.42 E-value=0.021 Score=52.03 Aligned_cols=97 Identities=10% Similarity=0.009 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc--cccCCC--CcCCCCce
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA--ETLGKD--VSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~--~~~~~~--~~~~~~fD 194 (289)
+++.+||-+|+|. |..++.+|+.....+|+++|.+++.++.++ ++|.+.+ +..+- +++... ....+.+|
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~~~~~~g~D 263 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----EVGATEC--VNPQDYKKPIQEVLTEMSNGGVD 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCceE--ecccccchhHHHHHHHHhCCCCc
Confidence 3588999999764 556666777664348999999998877764 4565422 21110 111000 00113699
Q ss_pred EEEEcCcccHHHHHHHHccccccC-eEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVG-GLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~Lkpg-G~l~~~ 224 (289)
+|+-..-. ...++.+.+.|+++ |+++..
T Consensus 264 ~vid~~g~--~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 264 FSFEVIGR--LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp EEEECSCC--HHHHHHHHHHBCTTTCEEEEC
T ss_pred EEEECCCC--HHHHHHHHHHhhcCCcEEEEe
Confidence 99865422 24566777889999 998753
No 339
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.41 E-value=0.022 Score=52.04 Aligned_cols=97 Identities=9% Similarity=0.060 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc--cccCCC--CcCCCCce
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA--ETLGKD--VSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~--~~~~~~--~~~~~~fD 194 (289)
+++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.++ ++|.+.+ +..+- +++... ....+.+|
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~v~~~~~~g~D 267 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK----ALGATDC--LNPRELDKPVQDVITELTAGGVD 267 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCcEE--EccccccchHHHHHHHHhCCCcc
Confidence 3588999999763 556666777664448999999998877664 4665422 21110 111000 00013699
Q ss_pred EEEEcCcccHHHHHHHHccccccC-eEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVG-GLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~Lkpg-G~l~~~ 224 (289)
+|+-..-. ...++.+.+.|+++ |++++.
T Consensus 268 vvid~~G~--~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 268 YSLDCAGT--AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp EEEESSCC--HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCC--HHHHHHHHHHhhcCCCEEEEE
Confidence 99865322 34567777899999 998753
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.38 E-value=0.019 Score=52.38 Aligned_cols=97 Identities=9% Similarity=0.041 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc--cccCCC--CcCCCCce
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA--ETLGKD--VSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~--~~~~~~--~~~~~~fD 194 (289)
+++.+||-+|+|+ |..++.+|+.....+|+++|.+++.++.+++ +|.+.+ +..+- +++... ....+.+|
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~~~~~~~~~v~~~~~~g~D 262 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGATEC--INPQDFSKPIQEVLIEMTDGGVD 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCSEE--ECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCceE--eccccccccHHHHHHHHhCCCCC
Confidence 3588999999764 5555666666543489999999988877754 565422 21110 111000 00113699
Q ss_pred EEEEcCcccHHHHHHHHccccccC-eEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVG-GLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~Lkpg-G~l~~~ 224 (289)
+|+-..-. ...++.+.+.|+++ |+++..
T Consensus 263 ~vid~~g~--~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 263 YSFECIGN--VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp EEEECSCC--HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCc--HHHHHHHHHhhccCCcEEEEE
Confidence 99865422 24567777899999 998763
No 341
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.33 E-value=0.02 Score=51.28 Aligned_cols=97 Identities=10% Similarity=0.040 Sum_probs=58.9
Q ss_pred CCCCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCce
Q 022962 119 CNSNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYD 194 (289)
Q Consensus 119 ~~~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD 194 (289)
++++.+||-.|++ .|.....+++.. +++|+++|.+++.++.++ .+|.+ ..+-..+.+++... ....+.+|
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLK----QIGFD-AAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----hcCCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence 4468899999983 344444445444 569999999998776663 34543 21211110111000 00114699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+++.++-. ..++.+.+.|++||++++.
T Consensus 217 ~vi~~~g~---~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 217 CYFDNVGG---EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEESSCH---HHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCh---HHHHHHHHHHhcCCEEEEE
Confidence 99988643 2467788999999999864
No 342
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.32 E-value=0.016 Score=53.09 Aligned_cols=97 Identities=12% Similarity=0.033 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecc--ccccCCC--CcCCCCce
Q 022962 120 NSNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGR--AETLGKD--VSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d--~~~~~~~--~~~~~~fD 194 (289)
+++.+||=+|+|+ |..++.+|+.....+|+++|.+++.++.++ ++|.+. ++... -.++... ...++.+|
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~i~~~~~gg~D 265 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGVNE--FVNPKDHDKPIQEVIVDLTDGGVD 265 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTCCE--EECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCcE--EEccccCchhHHHHHHHhcCCCCC
Confidence 4588999999863 666666776654448999999999887665 466542 22111 1111000 00123799
Q ss_pred EEEEcCcccHHHHHHHHccccccC-eEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVG-GLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~Lkpg-G~l~~~ 224 (289)
+|+-..-. ...++.+.+.|++| |++++.
T Consensus 266 ~vid~~g~--~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 266 YSFECIGN--VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp EEEECSCC--HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCC--HHHHHHHHHHhhccCCEEEEE
Confidence 99865322 34567778899997 998864
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.31 E-value=0.016 Score=51.96 Aligned_cols=97 Identities=14% Similarity=0.106 Sum_probs=61.2
Q ss_pred CCCCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCce
Q 022962 119 CNSNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYD 194 (289)
Q Consensus 119 ~~~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD 194 (289)
++++.+||-.|++ .|..++.+++.. +++|+++|.+++.++.+. +.+|.+.+ +..+-.++... ....+.+|
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLV---EELGFDGA--IDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH---HTTCCSEE--EETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH---HHcCCCEE--EECCCHHHHHHHHHhcCCCce
Confidence 4468899999983 455555566654 569999999998766652 34565321 21111111100 00124699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-+.-. ..++.+.+.|+++|+++..
T Consensus 221 ~vi~~~g~---~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 221 VFFDNVGG---EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEESSCH---HHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCc---chHHHHHHHHhhCCEEEEE
Confidence 99977543 3677888999999998864
No 344
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.30 E-value=0.015 Score=52.41 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=59.7
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
++.+||=.|+ |.|..++.+|+.. +++|+++|.+++..+.+++ +|.+.+ +..+ .++.. .......+|+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~v--~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----VGADIV--LPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSEE--EESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcEE--ecCc-hhHHHHHHHHhCCCCceE
Confidence 5889999997 3455666677665 5699999999988776665 465322 2222 22210 0001236999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-+.-.+ .++.+.+.|+++|++++.
T Consensus 231 vid~~g~~---~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 231 VVDPIGGP---AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEESCC-----CHHHHHHTEEEEEEEEEC
T ss_pred EEECCchh---HHHHHHHhhcCCCEEEEE
Confidence 99764332 456677899999999864
No 345
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.26 E-value=0.044 Score=48.61 Aligned_cols=86 Identities=13% Similarity=0.168 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+||=+|+|+ |..++.+|+.. +++|+++| +++..+.+++ +|.+. ++. |.+++ .+.+|+|+-.
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----lGa~~--v~~-d~~~v------~~g~Dvv~d~ 206 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----RGVRH--LYR-EPSQV------TQKYFAIFDA 206 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----HTEEE--EES-SGGGC------CSCEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----cCCCE--EEc-CHHHh------CCCccEEEEC
Confidence 588999999953 66666777765 45999999 8888777754 56432 222 32222 3679999854
Q ss_pred CcccHHHHHHHHccccccCeEEEEE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.-.. .+..+.++|+++|+++..
T Consensus 207 ~g~~---~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 207 VNSQ---NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ----------TTGGGEEEEEEEEEE
T ss_pred CCch---hHHHHHHHhcCCCEEEEE
Confidence 2221 225678899999999876
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.22 E-value=0.014 Score=52.67 Aligned_cols=95 Identities=13% Similarity=0.052 Sum_probs=60.1
Q ss_pred CCCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCce
Q 022962 120 NSNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD 194 (289)
+++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++ +|.+.+ +..+-.++.. .......+|
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~ga~~~--~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----LGADET--VNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSEE--EETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCEE--EcCCcccHHHHHHHHhCCCCce
Confidence 35889999998 4566666677665 5699999999988877753 454322 2111111100 000024699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+.+.-. ..++.+.+.|+++|+++..
T Consensus 238 ~vi~~~g~---~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 238 KVVDHTGA---LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EEEESSCS---SSHHHHHHHEEEEEEEEES
T ss_pred EEEECCCH---HHHHHHHHhhccCCEEEEE
Confidence 99977542 3456667789999998764
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.21 E-value=0.016 Score=52.69 Aligned_cols=95 Identities=18% Similarity=0.193 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccc-ccCCCCcCCCCceEEEE
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE-TLGKDVSFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~-~~~~~~~~~~~fD~V~s 198 (289)
++.+||-+|+|+ |..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +..+-. ++... ..+.+|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--~~~~~~~~~~~~--~~~~~D~vid 249 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----MGADHY--IATLEEGDWGEK--YFDTFDLIVV 249 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSEE--EEGGGTSCHHHH--SCSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCCCEE--EcCcCchHHHHH--hhcCCCEEEE
Confidence 488999999853 55555666654 5689999999988777654 565422 221111 11110 1146999996
Q ss_pred cCcccHHHHHHHHccccccCeEEEEE
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
..-......++.+.++|+++|+++..
T Consensus 250 ~~g~~~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 250 CASSLTDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CCSCSTTCCTTTGGGGEEEEEEEEEC
T ss_pred CCCCCcHHHHHHHHHHhcCCCEEEEe
Confidence 53220012455677899999998753
No 348
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.10 E-value=0.034 Score=49.94 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEec---cccccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG---RAETLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~---d~~~~~~~~~~~~~fD~V 196 (289)
++.+||=.|+|+ |..++.+|+......++++|.+++.++.+++ +|.+. ++.. |..+..........+|+|
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~--~i~~~~~~~~~~~~~~~~~~g~d~v 233 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQ--TFNSSEMSAPQMQSVLRELRFNQLI 233 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeE--EEeCCCCCHHHHHHhhcccCCcccc
Confidence 588999999864 4455566777766788999999988776654 67542 2221 111110000012458888
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+-..-. ...++.+.++|++||++++.
T Consensus 234 ~d~~G~--~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 234 LETAGV--PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp EECSCS--HHHHHHHHHHCCTTCEEEEC
T ss_pred cccccc--cchhhhhhheecCCeEEEEE
Confidence 755322 34566777889999998864
No 349
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.07 E-value=0.038 Score=49.79 Aligned_cols=96 Identities=14% Similarity=0.042 Sum_probs=58.9
Q ss_pred CCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceEE
Q 022962 121 SNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~V 196 (289)
++.+||-+|++ .|.....+++.. +++|+++|.+++.++.+++ +|.+ ..+-..+-+++... ....+.+|+|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IGGE-VFIDFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TTCC-EEEETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cCCc-eEEecCccHhHHHHHHHHhCCCCCEE
Confidence 58899999983 344445555554 5699999999887766543 5543 11111111111100 0001269999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+.+.-. ...++.+.+.|+++|+++..
T Consensus 243 i~~~g~--~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 243 INVSVS--EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EECSSC--HHHHHHHTTSEEEEEEEEEC
T ss_pred EECCCc--HHHHHHHHHHHhcCCEEEEE
Confidence 987532 34678888999999998864
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.03 E-value=0.045 Score=49.34 Aligned_cols=96 Identities=14% Similarity=0.060 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCCCh--HHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccC--CCCcCC-CCceE
Q 022962 121 SNLKLVDVGTGAGL--PGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG--KDVSFR-EQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGcG~G~--~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~--~~~~~~-~~fD~ 195 (289)
++.+||-.|+|+|. .++.+++...+++|+++|.+++.++.+++ +|.+.+ +-..+ .+.. ...... +.+|+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~~~-~~~~~-~~~~~~~~~~~~~~~~d~ 243 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGADYV-INASM-QDPLAEIRRITESKGVDA 243 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCSEE-EETTT-SCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCCEE-ecCCC-ccHHHHHHHHhcCCCceE
Confidence 48899999997443 33444544425799999999988877644 454321 21111 1110 000011 47999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-++-. ...++.+.+.|+++|+++..
T Consensus 244 vi~~~g~--~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 244 VIDLNNS--EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEESCCC--HHHHTTGGGGEEEEEEEEEC
T ss_pred EEECCCC--HHHHHHHHHHHhcCCEEEEE
Confidence 9977543 34677888999999998864
No 351
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.02 E-value=0.013 Score=52.79 Aligned_cols=95 Identities=15% Similarity=0.054 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCC--ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCce
Q 022962 120 NSNLKLVDVGTGA--GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG~--G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD 194 (289)
+++.+||-+|+|+ |..++.+|+.. +++|+++|.+++.++.+++ +|.+. ++..+-.++.. .......+|
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lga~~--~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----LGAAY--VIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSE--EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----CCCcE--EEeCCcccHHHHHHHHhCCCCCc
Confidence 3588999999974 55556666654 5699999999988877765 46532 22211111110 000124799
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-+.-... +. ...+.|+++|+++..
T Consensus 216 vvid~~g~~~--~~-~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 216 AAIDSIGGPD--GN-ELAFSLRPNGHFLTI 242 (340)
T ss_dssp EEEESSCHHH--HH-HHHHTEEEEEEEEEC
T ss_pred EEEECCCChh--HH-HHHHHhcCCCEEEEE
Confidence 9997643221 22 233789999999865
No 352
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.99 E-value=0.018 Score=51.71 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=59.1
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
++.+||-.|+ |.|..++.+|+.. +++|+++|.+++.++.+++ +|.+. ++..+-.++.. .......+|+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~--~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----YGAEY--LINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcE--EEeCCCchHHHHHHHHhCCCCceE
Confidence 4889999995 3455555566664 5699999999988776654 56432 22211111110 0001246999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-+.-. ..++.+.+.|+++|+++..
T Consensus 221 vid~~g~---~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 221 SFDSVGK---DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEECCGG---GGHHHHHHHEEEEEEEEEC
T ss_pred EEECCCh---HHHHHHHHHhccCCEEEEE
Confidence 9977543 3566667889999999864
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.96 E-value=0.029 Score=50.48 Aligned_cols=95 Identities=18% Similarity=0.098 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEEE
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAVA 198 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~s 198 (289)
++.+||-+|+|+ |..++.+|+.. +++|+++|.+++.++.++ ++|.+. ++..+-+++.... ...+.+|+|+-
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~--~~d~~~~~~~~~~~~~~~~~d~vid 236 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAK----ELGADL--VVNPLKEDAAKFMKEKVGGVHAAVV 236 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHH----HTTCSE--EECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----HCCCCE--EecCCCccHHHHHHHHhCCCCEEEE
Confidence 478999999953 55556666665 569999999998887765 356532 2211101110000 00036999987
Q ss_pred cCcccHHHHHHHHccccccCeEEEEE
Q 022962 199 RAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 199 n~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+.-. ...++.+.+.|+++|+++..
T Consensus 237 ~~g~--~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 237 TAVS--KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCC--HHHHHHHHHHhhcCCEEEEe
Confidence 6432 24566777889999998854
No 354
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.94 E-value=0.018 Score=52.02 Aligned_cols=96 Identities=23% Similarity=0.185 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceEE
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~V 196 (289)
++.+||-+|+|. |..++.+|+.....+|+++|.+++.++.+++ +|.+.+ +..+-+++.. .......+|+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~~~--~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGADYV--INPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCSEE--ECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEE--ECCCCcCHHHHHHHHcCCCCCCEE
Confidence 378999999853 5555566666543389999999988777654 455322 2211111100 00011369999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+-..-. ...++.+.+.|+++|+++..
T Consensus 241 id~~g~--~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 241 LEFSGA--PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EECSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCC--HHHHHHHHHHHhcCCEEEEE
Confidence 976432 24566677889999998764
No 355
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.93 E-value=0.018 Score=51.52 Aligned_cols=94 Identities=15% Similarity=0.011 Sum_probs=59.3
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
++.+||-.|+ |.|..++.+|+.. +++|+++|.+++.++.+++ +|.+. ++..+-.++.. .......+|+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~~--~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----LGAWE--TIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCCE--EEeCCCccHHHHHHHHhCCCCceE
Confidence 4889999983 3455555666654 5699999999998877754 45432 22211111100 0001247999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-+.-. ..+..+.+.|+++|+++..
T Consensus 213 vid~~g~---~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 213 VYDGVGQ---DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEESSCG---GGHHHHHTTEEEEEEEEEC
T ss_pred EEECCCh---HHHHHHHHHhcCCCEEEEE
Confidence 9976533 3566778899999999875
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.89 E-value=0.046 Score=49.68 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=61.3
Q ss_pred CCCeEEEEc--CCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceEE
Q 022962 121 SNLKLVDVG--TGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiG--cG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~V 196 (289)
++.+||-.| .|.|..++.+|+.. +++|+++|.+++.++.+++ +|.+. ++..+-.++... ......+|+|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~~--~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----LGCDR--PINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----cCCcE--EEecCChhHHHHHHHhcCCCCCEE
Confidence 488999999 34566777777765 5699999999988777654 56532 222111111000 0012469999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+-+.-. ..++.+.+.|+++|++++.
T Consensus 236 id~~g~---~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 236 YESVGG---AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EECSCT---HHHHHHHHHEEEEEEEEEC
T ss_pred EECCCH---HHHHHHHHHHhcCCEEEEE
Confidence 976433 4677778899999998864
No 357
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.80 E-value=0.1 Score=44.55 Aligned_cols=102 Identities=19% Similarity=0.084 Sum_probs=68.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC---CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC---PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~---p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.| |+|.+|..+++.+ .+.+|++++.+......+.+.++..+ .++.++.+|+.+...-.. + -+
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 56788777 5567788877643 46899999999877766666555544 368888999876421100 0 02
Q ss_pred CceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.+|+|+.++- .+ ...+++.+.+.++++|++++..
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 6899998841 11 1345667777787788888764
No 358
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.77 E-value=0.041 Score=49.63 Aligned_cols=95 Identities=15% Similarity=0.071 Sum_probs=58.3
Q ss_pred CCCeEEEEc-CC-CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVG-TG-AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiG-cG-~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V~ 197 (289)
++.+||=.| +| .|..++.+|+.. +++|+++|.+++.++.+++ +|.+.+--...+..+ +.. ...+.+|+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~--~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKK----MGADIVLNHKESLLNQFKT--QGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHH----HTCSEEECTTSCHHHHHHH--HTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcEEEECCccHHHHHHH--hCCCCccEEE
Confidence 478999884 43 355556666665 5699999999988877765 565322110111111 100 0124699998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-..-. ...++.+.++|+++|+++..
T Consensus 223 d~~g~--~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 223 CTFNT--DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ESSCH--HHHHHHHHHHEEEEEEEEES
T ss_pred ECCCc--hHHHHHHHHHhccCCEEEEE
Confidence 65432 34566777889999999753
No 359
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.70 E-value=0.045 Score=48.26 Aligned_cols=90 Identities=16% Similarity=0.095 Sum_probs=59.6
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc-cccCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA-ETLGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~-~~~~~~~~~~~~fD~V~ 197 (289)
++.+||-+|+ |.|..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +..+- .++... . +.+|+|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~~--~~~~~~~~~~~~--~-~~~d~vi 194 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----LGAEEA--ATYAEVPERAKA--W-GGLDLVL 194 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----TTCSEE--EEGGGHHHHHHH--T-TSEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCEE--EECCcchhHHHH--h-cCceEEE
Confidence 4889999997 3455666677665 4699999999988776643 565422 22111 122111 1 4699999
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
- .-. ..++.+.+.|+++|+++..
T Consensus 195 d-~g~---~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 195 E-VRG---KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp E-CSC---TTHHHHHTTEEEEEEEEEC
T ss_pred E-CCH---HHHHHHHHhhccCCEEEEE
Confidence 8 433 3667788999999998854
No 360
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.64 E-value=0.05 Score=48.82 Aligned_cols=98 Identities=10% Similarity=0.001 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCce
Q 022962 119 CNSNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYD 194 (289)
Q Consensus 119 ~~~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD 194 (289)
++++.+||-.|+ |.|..++.+++.. +++|+++|.+++.++.+++ ++|.+.+ +-..+..++... ....+.+|
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKT---KFGFDDA-FNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH---TSCCSEE-EETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HcCCceE-EecCCHHHHHHHHHHHhCCCCc
Confidence 456889999997 3444555556554 5699999999987776642 3454321 111111111100 00124699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+.+.-. ..++.+.+.|+++|++++.
T Consensus 228 ~vi~~~g~---~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 228 IYFENVGG---KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEESSCH---HHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCH---HHHHHHHHHHhcCCEEEEE
Confidence 99977533 3677888999999998864
No 361
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.59 E-value=0.013 Score=66.23 Aligned_cols=99 Identities=12% Similarity=0.086 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHCC-----CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc-CCCCcCCCCce
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIACP-----DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVSFREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~p-----~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~-~~~~~~~~~fD 194 (289)
+..+||+||.|+|..+..+..... ..+.+..|+|+...+.+++..+.+ ++..-.-|..+. .. ....||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~---~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPG---SLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC--------CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccC---CCCcee
Confidence 356999999999976544433322 247889999987776677665543 233211132221 00 125799
Q ss_pred EEEEcC----cccHHHHHHHHccccccCeEEEEEE
Q 022962 195 VAVARA----VAEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 195 ~V~sn~----~~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+|++.. ..++...+..+.++|||||++++..
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEE
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 999763 3467888999999999999998754
No 362
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.54 E-value=1.7 Score=44.82 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=72.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCC--EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccC------------CC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDW--KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG------------KD- 186 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~--~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~------------~~- 186 (289)
..+++|+-||.|.+++.+.++ +. -|.|+|+++.+++..+.|. .+..++.+|+.++. ..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhh
Confidence 458999999999998888766 44 5789999999888776652 24566777765431 00
Q ss_pred CcCCCCceEEEEcC------cc---------c-----HHHHHHHHccccccCeEEEEEE--c---CCcHHHHHHHHHHHH
Q 022962 187 VSFREQYDVAVARA------VA---------E-----MRILAEYCLPLVRVGGLFVAAK--G---HDPQEEVKNSERAVQ 241 (289)
Q Consensus 187 ~~~~~~fD~V~sn~------~~---------~-----~~~ll~~~~~~LkpgG~l~~~~--g---~~~~~ei~~~~~~l~ 241 (289)
....+.+|+|+... .+ + +..+++. ...++|.- ++++- | ......+..+.+.+.
T Consensus 613 lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~ri-v~~~rPk~-~llENV~glls~~~~~~~~~i~~~L~ 690 (1002)
T 3swr_A 613 LPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSY-CDYYRPRF-FLLENVRNFVSFKRSMVLKLTLRCLV 690 (1002)
T ss_dssp CCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHH-HHHHCCSE-EEEEEEGGGGTTGGGHHHHHHHHHHH
T ss_pred cccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHH-HHHhCCCE-EEEeccHHHhccCcchHHHHHHHHHH
Confidence 00124689998762 11 0 1122322 23456753 34442 2 122345667777888
Q ss_pred HhCCeEeE
Q 022962 242 LMGASLLQ 249 (289)
Q Consensus 242 ~~g~~~~~ 249 (289)
..|+.+..
T Consensus 691 ~lGY~v~~ 698 (1002)
T 3swr_A 691 RMGYQCTF 698 (1002)
T ss_dssp HHTCEEEE
T ss_pred hcCCeEEE
Confidence 99997643
No 363
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.49 E-value=0.02 Score=51.06 Aligned_cols=94 Identities=17% Similarity=0.080 Sum_probs=57.4
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
++.+||-.|+ |.|...+.+++.. +++|+++|.+++.++.+++ +|.+ .. +..+-++... .......+|+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~~-~~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----AGAW-QV-INYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS-EE-EETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC-EE-EECCCccHHHHHHHHhCCCCceE
Confidence 4789999994 3344444455443 5699999999988777654 4543 21 2111111100 0001236999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+.++- ...++.+.+.|+++|+++..
T Consensus 213 vi~~~g---~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 213 VYDSVG---RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEECSC---GGGHHHHHHTEEEEEEEEEC
T ss_pred EEECCc---hHHHHHHHHHhcCCCEEEEE
Confidence 998754 34567777899999998864
No 364
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.42 E-value=0.17 Score=39.18 Aligned_cols=111 Identities=16% Similarity=0.020 Sum_probs=65.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~s 198 (289)
..+|+=+|| |.+|..+++.. .+.+|+++|.+++.++.+++ . .+.++.+|..+..... ..-..+|+|++
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 457888887 56777776543 46799999999988776654 2 4667888876532100 00146899886
Q ss_pred cCcccH-HHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeE
Q 022962 199 RAVAEM-RILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASL 247 (289)
Q Consensus 199 n~~~~~-~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~ 247 (289)
..-.+. ...+-...+.+.|+..++..... . +. .+.++..|.+.
T Consensus 78 ~~~~~~~n~~~~~~a~~~~~~~~iiar~~~-~-~~----~~~l~~~G~d~ 121 (140)
T 3fwz_A 78 TIPNGYEAGEIVASARAKNPDIEIIARAHY-D-DE----VAYITERGANQ 121 (140)
T ss_dssp CCSCHHHHHHHHHHHHHHCSSSEEEEEESS-H-HH----HHHHHHTTCSE
T ss_pred ECCChHHHHHHHHHHHHHCCCCeEEEEECC-H-HH----HHHHHHCCCCE
Confidence 533322 22222334556778777654422 2 22 12455678753
No 365
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.37 E-value=0.038 Score=49.50 Aligned_cols=94 Identities=12% Similarity=-0.010 Sum_probs=58.6
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceE
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDV 195 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~ 195 (289)
++.+||-.|+ |.|...+.+++.. +++|+++|.+++.++.+++ +|.+ . ++..+-.+... .......+|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~g~~-~-~~d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----LGCH-H-TINYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS-E-EEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC-E-EEECCCHHHHHHHHHHhCCCCCeE
Confidence 4789999996 4455555566554 5699999999988777654 4543 2 12111111100 0001246999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+.++-. ..++.+.+.|+++|+++..
T Consensus 218 vi~~~g~---~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 218 VYDSIGK---DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEECSCT---TTHHHHHHTEEEEEEEEEC
T ss_pred EEECCcH---HHHHHHHHhhccCCEEEEE
Confidence 9977543 4566777899999998764
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.33 E-value=0.032 Score=50.53 Aligned_cols=95 Identities=16% Similarity=0.115 Sum_probs=59.0
Q ss_pred CCCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceE
Q 022962 120 NSNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDV 195 (289)
Q Consensus 120 ~~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~ 195 (289)
+++.+||-.|. |.|..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +..+-.++... ....+.+|+
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~~--~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----LGAKRG--INYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCEE--EeCCchHHHHHHHHHhCCCceE
Confidence 35889999853 2455556666665 5699999999998877764 464322 22111111100 000247999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-+.-.. .++.+.+.|+++|+++..
T Consensus 239 vid~~g~~---~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 239 ILDMIGAA---YFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEESCCGG---GHHHHHHTEEEEEEEEEC
T ss_pred EEECCCHH---HHHHHHHHhccCCEEEEE
Confidence 99775332 456667899999998864
No 367
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.22 E-value=0.044 Score=49.65 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=58.0
Q ss_pred CCCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCce
Q 022962 120 NSNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD 194 (289)
+++.+||-.|++ .|..++.+++.. +++|+++|.+++.++.++ .+|.+. ++..+-.+... .......+|
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~----~~ga~~--~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVL----QNGAHE--VFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCSE--EEETTSTTHHHHHHHHHCTTCEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHH----HcCCCE--EEeCCCchHHHHHHHHcCCCCcE
Confidence 358899999973 344445555554 579999999998877554 455432 12111111100 000123699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+.++-. ..+..+.++|+++|+++..
T Consensus 242 ~vi~~~G~---~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 242 IIIEMLAN---VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEESCHH---HHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCh---HHHHHHHHhccCCCEEEEE
Confidence 99987543 2456778899999998764
No 368
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.18 E-value=0.42 Score=43.11 Aligned_cols=101 Identities=14% Similarity=0.222 Sum_probs=71.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcC---------------------CCCEEEEeccc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQ---------------------LLNVQIVRGRA 180 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~---------------------l~ni~~~~~d~ 180 (289)
...|+.+|||....+..+....++..++-||. ++.++.-++.+.+.+ -++.+++.+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 46899999999999999887667788888887 777777777666541 24789999999
Q ss_pred cccCC------CCcCCCCceEEEEcCc------ccHHHHHHHHccccccCeEEEEE
Q 022962 181 ETLGK------DVSFREQYDVAVARAV------AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 181 ~~~~~------~~~~~~~fD~V~sn~~------~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.+..- .....+...++++-.+ .....+++.+.... |+|.++++
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEE
Confidence 87421 0001245678887643 34577888777766 78887644
No 369
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.13 E-value=0.23 Score=42.96 Aligned_cols=75 Identities=8% Similarity=-0.079 Sum_probs=49.7
Q ss_pred EEEEeccccccCCCCcCCCCceEEEEcC---cc---------------cHHHHHHHHccccccCeEEEEEEcCCcHHHHH
Q 022962 173 VQIVRGRAETLGKDVSFREQYDVAVARA---VA---------------EMRILAEYCLPLVRVGGLFVAAKGHDPQEEVK 234 (289)
Q Consensus 173 i~~~~~d~~~~~~~~~~~~~fD~V~sn~---~~---------------~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~ 234 (289)
.+++++|..+.-.. ..+++||+|++.+ .. .+..+++++.++|+|||.+++..+.. +..
T Consensus 5 ~~l~~gD~~~~l~~-l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~---~~~ 80 (260)
T 1g60_A 5 NKIHQMNCFDFLDQ-VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPF---NCA 80 (260)
T ss_dssp SSEEECCHHHHHHH-SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHH---HHH
T ss_pred CeEEechHHHHHHh-ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcH---HHH
Confidence 45678887553211 1136899999973 11 34677888899999999999876432 233
Q ss_pred HHHHHHHHhCCeEeEEe
Q 022962 235 NSERAVQLMGASLLQLC 251 (289)
Q Consensus 235 ~~~~~l~~~g~~~~~~~ 251 (289)
.+...+.+.||......
T Consensus 81 ~~~~~~~~~gf~~~~~i 97 (260)
T 1g60_A 81 FICQYLVSKGMIFQNWI 97 (260)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhhccceeEEE
Confidence 44456678899877654
No 370
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.11 E-value=0.044 Score=49.24 Aligned_cols=61 Identities=13% Similarity=0.057 Sum_probs=46.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL 183 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~ 183 (289)
.++..|||--||+|..++...+. +.+.+|+|+++..++.++++++..+.+ ...++.|+.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~i 311 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNRI 311 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHHH
Confidence 45889999999999987775544 679999999999999999887766542 44445555544
No 371
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.11 E-value=0.14 Score=45.33 Aligned_cols=90 Identities=14% Similarity=0.187 Sum_probs=59.3
Q ss_pred eEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 124 KLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 124 ~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+||=.|+ |.|..++.+|+.. +++|+++|.+++..+.+++ +|.+.+ +-..+...... ...+.+|+|+-..-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~~~~~~--~~~~~~d~v~d~~g 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----LGANRI-LSRDEFAESRP--LEKQLWAGAIDTVG 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----HTCSEE-EEGGGSSCCCS--SCCCCEEEEEESSC
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCEE-EecCCHHHHHh--hcCCCccEEEECCC
Confidence 4998887 4566777778776 4699999999998887765 565422 21222211111 11357999885532
Q ss_pred ccHHHHHHHHccccccCeEEEEE
Q 022962 202 AEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 202 ~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
. ..++.+.+.|+++|+++..
T Consensus 221 ~---~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 221 D---KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp H---HHHHHHHHTEEEEEEEEEC
T ss_pred c---HHHHHHHHHHhcCCEEEEE
Confidence 2 2778888999999999864
No 372
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.11 E-value=0.045 Score=49.57 Aligned_cols=93 Identities=15% Similarity=0.035 Sum_probs=55.4
Q ss_pred CeEEEEcCCC-ChHH-HHHH-HHCCCCEEEEEeCChH---HHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 123 LKLVDVGTGA-GLPG-LVLA-IACPDWKVTLLESMNK---RCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 123 ~~VLDiGcG~-G~~~-l~la-~~~p~~~V~~iD~s~~---~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
.+||-+|+|+ |..+ +.+| +.....+|+++|.+++ ..+.++ ++|.+.+ ..+-+++..-....+.||+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~v---~~~~~~~~~i~~~~gg~Dvv 246 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDATYV---DSRQTPVEDVPDVYEQMDFI 246 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTCEEE---ETTTSCGGGHHHHSCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCCccc---CCCccCHHHHHHhCCCCCEE
Confidence 8999999843 4444 5556 5543334999999987 777665 4565322 11111111000001369999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+-..-. ...++.+.+.|+++|+++..
T Consensus 247 id~~g~--~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 247 YEATGF--PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EECSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCC--hHHHHHHHHHHhcCCEEEEE
Confidence 855322 23566777899999998864
No 373
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.82 E-value=0.26 Score=42.16 Aligned_cols=103 Identities=9% Similarity=0.030 Sum_probs=70.4
Q ss_pred CCeEEEEcCC--CChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------C
Q 022962 122 NLKLVDVGTG--AGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------R 190 (289)
Q Consensus 122 ~~~VLDiGcG--~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~ 190 (289)
+.++|=.|++ +| +|..+|+.+ .+.+|++++.++...+.+.+..+..+-.++.++..|+.+...-.. + -
T Consensus 7 ~k~vlVTGasg~~G-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 7 GRNIVVMGVANKRS-IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TCEEEEECCCSTTS-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCc-HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 6789999987 44 466666543 478999999998777777776666655468999999886431100 0 1
Q ss_pred CCceEEEEcCc--------c--------c-----------HHHHHHHHccccccCeEEEEEE
Q 022962 191 EQYDVAVARAV--------A--------E-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 191 ~~fD~V~sn~~--------~--------~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+..|.++.|+- . . .-.+++.+.+.++++|.+++..
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 36899998741 0 1 1235677788888899998765
No 374
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.73 E-value=0.086 Score=47.35 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=38.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCCh---HHHHHHHHHHHHcC
Q 022962 120 NSNLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMN---KRCVFLEHAVSLTQ 169 (289)
Q Consensus 120 ~~~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~---~~l~~a~~~~~~~~ 169 (289)
.++..|||--||+|..++...+. +.+.+|+|+++ ..++.+++++++.+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 35889999999999988776665 67999999999 99999988876654
No 375
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.69 E-value=0.19 Score=43.09 Aligned_cols=78 Identities=17% Similarity=0.109 Sum_probs=54.9
Q ss_pred CCeEEEEcC-CCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGT-GAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGc-G~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.|+ |+|+ |..+++.+ .+.+|+++|.+...++.+.+..+..+..++.++..|+.+...-.. . -+
T Consensus 22 ~k~vlITGasg~GI-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 22 GKVVLVTAAAGTGI-GSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TCEEEESSCSSSSH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCch-HHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 678888887 6674 66665542 468999999999888777776665554579999999986431100 0 13
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 101 ~id~li~~A 109 (266)
T 3o38_A 101 RLDVLVNNA 109 (266)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 689999984
No 376
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.68 E-value=0.08 Score=47.15 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=56.8
Q ss_pred CC-eEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc-cccCCCCcCCCCceEEE
Q 022962 122 NL-KLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA-ETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~-~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~-~~~~~~~~~~~~fD~V~ 197 (289)
+. +||-.|+ |.|..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +-..+. .+.... ...+.+|+|+
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~-~~~~~~d~vi 221 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----LGAKEV-LAREDVMAERIRP-LDKQRWAAAV 221 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----TTCSEE-EECC----------CCSCCEEEEE
T ss_pred CCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----cCCcEE-EecCCcHHHHHHH-hcCCcccEEE
Confidence 53 7999997 4456666677765 4689999999887776653 565422 111111 110000 0124699998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-+.-.. .++.+.+.|+++|+++..
T Consensus 222 d~~g~~---~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 222 DPVGGR---TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ECSTTT---THHHHHHTEEEEEEEEEC
T ss_pred ECCcHH---HHHHHHHhhccCCEEEEE
Confidence 664322 456677899999998864
No 377
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.59 E-value=0.055 Score=48.93 Aligned_cols=95 Identities=8% Similarity=-0.013 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCce
Q 022962 120 NSNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD 194 (289)
+++.+||-.|++ .|..++.+++.. +++|+++|.+++.++.+++ +|.+ . ++..+-.+... .......+|
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~-~-~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK----LGAA-A-GFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS-E-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCc-E-EEecCChHHHHHHHHHhcCCCce
Confidence 358899999853 344444555554 5799999999988877643 4543 2 12111111100 000124699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-++-.. .++.+.+.|+++|++++.
T Consensus 234 ~vi~~~G~~---~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 234 LILDCIGGS---YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp EEEESSCGG---GHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCch---HHHHHHHhccCCCEEEEE
Confidence 999875432 355667889999998864
No 378
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.38 E-value=0.066 Score=48.19 Aligned_cols=92 Identities=11% Similarity=0.128 Sum_probs=58.2
Q ss_pred CCCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCce
Q 022962 120 NSNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYD 194 (289)
Q Consensus 120 ~~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD 194 (289)
+++.+||=+|+ |.|..++.+|+.. +++|+++ .+++.++.+++ +|.+. +. +-.++.. .......+|
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~----lGa~~---i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRD----LGATP---ID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHH----HTSEE---EE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHH----cCCCE---ec-cCCCHHHHHHHHhcCCCce
Confidence 35889999994 3466666677665 5699999 78887766644 56432 22 2222110 000124699
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-+.-. ..+..+.+.|+++|+++..
T Consensus 219 ~vid~~g~---~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 219 LVYDTLGG---PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEESSCT---HHHHHHHHHEEEEEEEEES
T ss_pred EEEECCCc---HHHHHHHHHHhcCCeEEEE
Confidence 99866432 4667777899999999864
No 379
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.38 E-value=0.32 Score=42.05 Aligned_cols=102 Identities=15% Similarity=0.106 Sum_probs=68.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC------------hHHHHHHHHHHHHcCCCCEEEEeccccccCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM------------NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s------------~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~ 187 (289)
+.+||=.|+++| +|..+|+.+ .+.+|+.+|.+ .+.++.+....+..+. ++.++..|+.+...-.
T Consensus 10 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 10 DKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHH
Confidence 678998998766 577776553 46899999987 6666666666665553 6889999987643110
Q ss_pred c-C------CCCceEEEEcCc----------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 188 S-F------REQYDVAVARAV----------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 188 ~-~------~~~fD~V~sn~~----------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
. . -+..|+++.|+- .+ .-.+++.+.+.++.+|.++...
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 0 136899998841 11 2345567778888889988654
No 380
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.34 E-value=0.22 Score=47.26 Aligned_cols=122 Identities=12% Similarity=0.032 Sum_probs=73.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCE-EEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWK-VTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV------------- 187 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~-V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~------------- 187 (289)
..+++|+-||.|.+++.+... +.+ |.++|+++.+++..+.|... ..+..++++|+.++....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhh
Confidence 468999999999988777654 444 89999999988877765321 123456778988764210
Q ss_pred -cCCCCceEEEEcC------cc----------------c-HHHHHHHHc---cccccCeEEEEEE--cC---CcHHHHHH
Q 022962 188 -SFREQYDVAVARA------VA----------------E-MRILAEYCL---PLVRVGGLFVAAK--GH---DPQEEVKN 235 (289)
Q Consensus 188 -~~~~~fD~V~sn~------~~----------------~-~~~ll~~~~---~~LkpgG~l~~~~--g~---~~~~ei~~ 235 (289)
.....+|+|+... .+ + ...++.++. ..++|. .|+++- |- +....+..
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk-~fvlENV~gl~s~~~g~~f~~ 242 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA-MFVLENVKNLKSHDKGKTFRI 242 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS-EEEEEEETTTTTGGGGHHHHH
T ss_pred hhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc-EEEEeCcHHHhcccCCcHHHH
Confidence 0013589998651 11 0 001232222 235674 444442 22 22356677
Q ss_pred HHHHHHHhCCeEe
Q 022962 236 SERAVQLMGASLL 248 (289)
Q Consensus 236 ~~~~l~~~g~~~~ 248 (289)
+.+.|...|+.+.
T Consensus 243 i~~~L~~lGY~v~ 255 (482)
T 3me5_A 243 IMQTLDELGYDVA 255 (482)
T ss_dssp HHHHHHHTTEEET
T ss_pred HHHHHhcCCcEEE
Confidence 7888889998764
No 381
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.31 E-value=0.027 Score=50.72 Aligned_cols=93 Identities=16% Similarity=0.093 Sum_probs=56.7
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCC---CCcCCCCceEEE
Q 022962 122 NLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGK---DVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~---~~~~~~~fD~V~ 197 (289)
+.+||-+|+|. |..++.+|+.....+|+++|.+++.++.+++ + .+ .++..+-+++.. ... ...+|+|+
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----l-a~--~v~~~~~~~~~~~~~~~~-~~g~D~vi 236 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP----Y-AD--RLVNPLEEDLLEVVRRVT-GSGVEVLL 236 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT----T-CS--EEECTTTSCHHHHHHHHH-SSCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h-HH--hccCcCccCHHHHHHHhc-CCCCCEEE
Confidence 78999999853 5555666766533389999999988776654 2 21 122111111100 001 24699998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-..-. ...++.+.+.|+++|+++..
T Consensus 237 d~~g~--~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 237 EFSGN--EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp ECSCC--HHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCC--HHHHHHHHHHHhcCCEEEEE
Confidence 66422 23566777889999998764
No 382
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.29 E-value=0.54 Score=40.29 Aligned_cols=103 Identities=15% Similarity=0.063 Sum_probs=69.8
Q ss_pred CCeEEEEcCCC--ChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------cCC
Q 022962 122 NLKLVDVGTGA--GLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-------SFR 190 (289)
Q Consensus 122 ~~~VLDiGcG~--G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-------~~~ 190 (289)
++++|=-|+++ | +|..+|+.+ .+++|+.+|.+++.++.+.+.+++.+-.++.+++.|+.+...-. ..-
T Consensus 6 gK~alVTGaa~~~G-IG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRS-IAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTC-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCch-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 78899889654 5 466666543 47899999999988888888777776557888899987642100 001
Q ss_pred CCceEEEEcCc----------------ccH-----------HHHHHHHccccccCeEEEEEE
Q 022962 191 EQYDVAVARAV----------------AEM-----------RILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 191 ~~fD~V~sn~~----------------~~~-----------~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+..|.++.|+- .++ -.+.+.+...++.+|.++...
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 47899998830 011 122345567788899998765
No 383
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.19 E-value=0.085 Score=47.61 Aligned_cols=97 Identities=9% Similarity=0.129 Sum_probs=58.5
Q ss_pred CCCC--CeEEEEcCC--CChHHHHHHHHCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCC
Q 022962 119 CNSN--LKLVDVGTG--AGLPGLVLAIACPDW-KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFRE 191 (289)
Q Consensus 119 ~~~~--~~VLDiGcG--~G~~~l~la~~~p~~-~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~ 191 (289)
++++ .+||-.|++ .|...+.+++.. ++ +|+++|.+++.++.+++ .+|.+ . ++..+-.++... ....+
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~---~~g~~-~-~~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTS---ELGFD-A-AINYKKDNVAEQLRESCPA 229 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH---TSCCS-E-EEETTTSCHHHHHHHHCTT
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHH---HcCCc-e-EEecCchHHHHHHHHhcCC
Confidence 3457 899999983 344444455554 55 99999999877665543 25543 2 121111111000 00112
Q ss_pred CceEEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 192 QYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 192 ~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.+|+|+-++-. ..++.+.++|+++|++++.
T Consensus 230 ~~d~vi~~~G~---~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 230 GVDVYFDNVGG---NISDTVISQMNENSHIILC 259 (357)
T ss_dssp CEEEEEESCCH---HHHHHHHHTEEEEEEEEEC
T ss_pred CCCEEEECCCH---HHHHHHHHHhccCcEEEEE
Confidence 69999987642 5677888899999998864
No 384
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.15 E-value=0.22 Score=43.80 Aligned_cols=77 Identities=17% Similarity=0.081 Sum_probs=55.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.+||=.|+++| +|..+++.+ .+.+|+++|.++..++.+.+..+..+. ++.++..|+.+...-.. . .+.
T Consensus 31 gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 31 GRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 678999998765 577776653 468999999999888877776666554 68899999887432100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 109 id~lvnnA 116 (301)
T 3tjr_A 109 VDVVFSNA 116 (301)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 385
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.99 E-value=0.12 Score=46.02 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=57.9
Q ss_pred CC-eEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc-cccCCCCcCCCCceEEE
Q 022962 122 NL-KLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA-ETLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~-~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~-~~~~~~~~~~~~fD~V~ 197 (289)
+. +||=.|+ |.|..++.+|+.. +++|+++|.+++.++.+++ +|.+.+ +-..+. .+.... ...+.+|+|+
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v-~~~~~~~~~~~~~-~~~~~~d~vi 222 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----LGASEV-ISREDVYDGTLKA-LSKQQWQGAV 222 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----HTCSEE-EEHHHHCSSCCCS-SCCCCEEEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE-EECCCchHHHHHH-hhcCCccEEE
Confidence 53 7999997 3455556666654 4689999999887777654 565432 111111 110000 1124699998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-..-. ..+..+.+.|+++|+++..
T Consensus 223 d~~g~---~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 223 DPVGG---KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp ESCCT---HHHHHHHTTEEEEEEEEEC
T ss_pred ECCcH---HHHHHHHHhhcCCCEEEEE
Confidence 66433 2577788999999998864
No 386
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.90 E-value=0.26 Score=42.06 Aligned_cols=77 Identities=12% Similarity=0.022 Sum_probs=51.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeC-ChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCC------C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLES-MNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFR------E 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~-s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~------~ 191 (289)
+.+||=.|+ +|.+|..+++.+ .+.+|++++. ++..++...+..+..+. ++.++.+|+.+...-. .+. +
T Consensus 21 ~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 21 GKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 678888886 566788877653 4679999998 77766655555555443 6888899987642110 000 2
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+|+.++
T Consensus 99 ~~d~vi~~A 107 (274)
T 1ja9_A 99 GLDFVMSNS 107 (274)
T ss_dssp CEEEEECCC
T ss_pred CCCEEEECC
Confidence 689999874
No 387
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.72 E-value=0.61 Score=39.81 Aligned_cols=99 Identities=19% Similarity=0.146 Sum_probs=66.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+++|+++|.+++.++.+.+. .+ .++.++..|+.+...-.. .-+.
T Consensus 8 gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 8 GKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREE---FG-PRVHALRSDIADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HG-GGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC-CcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 678999997665 577776653 468999999998876655443 23 268889999876432100 0137
Q ss_pred ceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 193 YDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 193 fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.|+++.|+- .+ .-.+.+.+.+.++.+|.++...
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 899998840 01 2345667778888899988764
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.41 E-value=0.15 Score=46.22 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=55.4
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCCh---HHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEE
Q 022962 122 NLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMN---KRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~---~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V 196 (289)
+.+||-+|+|. |..++.+|+.. +++|+++|.++ +.++.+++ +|.+.+ ..+ ++.... ...+.+|+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~----~ga~~v---~~~--~~~~~~~~~~~~~d~v 250 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEE----TKTNYY---NSS--NGYDKLKDSVGKFDVI 250 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHH----HTCEEE---ECT--TCSHHHHHHHCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHH----hCCcee---chH--HHHHHHHHhCCCCCEE
Confidence 78999999832 33344455544 45999999998 77666543 454322 111 111000 001469999
Q ss_pred EEcCcccHHHHH-HHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILA-EYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll-~~~~~~LkpgG~l~~~ 224 (289)
+.+.-.. ..+ +.+.+.|+++|+++..
T Consensus 251 id~~g~~--~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 251 IDATGAD--VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EECCCCC--THHHHHHGGGEEEEEEEEEC
T ss_pred EECCCCh--HHHHHHHHHHHhcCCEEEEE
Confidence 9775321 234 7778899999998864
No 389
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.40 E-value=3.7 Score=43.63 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=71.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCC--EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccC------------CC-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDW--KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLG------------KD- 186 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~--~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~------------~~- 186 (289)
..+++|+-||.|.+++.+.++ +. -|.++|+++.+++..+.|. .+..++++|+.++. ..
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 458999999999998887754 43 4789999999988777752 24456666665321 00
Q ss_pred CcCCCCceEEEEcC------cc---------c-----HHHHHHHHccccccCeEEEEEE--c---CCcHHHHHHHHHHHH
Q 022962 187 VSFREQYDVAVARA------VA---------E-----MRILAEYCLPLVRVGGLFVAAK--G---HDPQEEVKNSERAVQ 241 (289)
Q Consensus 187 ~~~~~~fD~V~sn~------~~---------~-----~~~ll~~~~~~LkpgG~l~~~~--g---~~~~~ei~~~~~~l~ 241 (289)
....+.+|+|+... .+ + +..+++. ...++|. .|+++- | ......+..+...+.
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lri-v~~~rPk-~fv~ENV~glls~~~g~~~~~il~~L~ 1001 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSY-CDYYRPR-FFLLENVRNFVSYRRSMVLKLTLRCLV 1001 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHH-HHHHCCS-EEEEEEEGGGGTTTTTHHHHHHHHHHH
T ss_pred ccccCccceEEecCCCcccccccccccccccchhhHHHHHHHHH-HHHhcCc-EEEEeccHHHhccCccHHHHHHHHHHH
Confidence 00124689999751 11 1 1122322 2346676 444442 2 122344566777888
Q ss_pred HhCCeEeE
Q 022962 242 LMGASLLQ 249 (289)
Q Consensus 242 ~~g~~~~~ 249 (289)
..|+.+..
T Consensus 1002 ~lGY~v~~ 1009 (1330)
T 3av4_A 1002 RMGYQCTF 1009 (1330)
T ss_dssp HHTCEEEE
T ss_pred hcCCeeeE
Confidence 99997643
No 390
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.30 E-value=0.32 Score=44.49 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCC--EEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLN--VQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~n--i~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+.+||.|+.+-|.++..++.. .++.+.=|--....++.|++.+++++ +++... .++. ...||+|+..
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~------~~~~~~v~~~ 107 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TADY------PQQPGVVLIK 107 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSCC------CSSCSEEEEE
T ss_pred CCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-cccc------ccCCCEEEEE
Confidence 568999999999998888743 34555335555567788999999864 665432 2222 2679999987
Q ss_pred ---CcccHHHHHHHHccccccCeEEEEE
Q 022962 200 ---AVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ---~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+.+.....+..+...|++|+.+++.
T Consensus 108 lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 108 VPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp CCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred cCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 4556778888999999999998754
No 391
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.23 E-value=0.18 Score=47.27 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc--------------
Q 022962 119 CNSNLKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-------------- 182 (289)
Q Consensus 119 ~~~~~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-------------- 182 (289)
++++.+||=+|+ |.|..++.+|+.. +++|++++.+++.++.+++ +|.+.+ +...-.+
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v--i~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA----MGAEAI--IDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCCEE--EETTTTTCCSEEETTEECHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh----hCCcEE--EecCcCcccccccccccchHH
Confidence 345889999997 3455666677665 5799999999988877754 565322 2111111
Q ss_pred -------cCCCCcCCCCceEEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 183 -------LGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 183 -------~~~~~~~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+... .....+|+|+-..-. ..+..+.++|+++|+++.+
T Consensus 299 ~~~~~~~i~~~-t~g~g~Dvvid~~G~---~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 299 WKRFGKRIREL-TGGEDIDIVFEHPGR---ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHH-HTSCCEEEEEECSCH---HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHH-hCCCCCcEEEEcCCc---hhHHHHHHHhhCCcEEEEE
Confidence 1000 012479999865422 4567777899999999864
No 392
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.17 E-value=0.4 Score=40.91 Aligned_cols=103 Identities=10% Similarity=0.009 Sum_probs=69.7
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CC
Q 022962 121 SNLKLVDVGTG-AGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FR 190 (289)
Q Consensus 121 ~~~~VLDiGcG-~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~ 190 (289)
++.+||=.|++ +|.+|..+|+.+ .+.+|++++.++...+.+++..+..+ ++.++..|+.+...-.. .-
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47899999985 355677777653 46899999998776666666656554 47788889876431100 01
Q ss_pred CCceEEEEcCc--------------cc--------------HHHHHHHHccccccCeEEEEEE
Q 022962 191 EQYDVAVARAV--------------AE--------------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 191 ~~fD~V~sn~~--------------~~--------------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+..|+++.|+- .+ .-.+.+.+.+.++++|.+++..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 36899998841 11 1345667777888889988765
No 393
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.14 E-value=0.54 Score=41.14 Aligned_cols=102 Identities=9% Similarity=-0.036 Sum_probs=67.3
Q ss_pred CCeEEEEcCCCC-hHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CCC
Q 022962 122 NLKLVDVGTGAG-LPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G-~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~~ 191 (289)
+.++|=.|.++| .+|..+|+.+ .+++|+.++.+++..+.+++..+..+ ++.++..|+.+...-.. .-+
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 678999998743 2466665543 46899999999876666666655554 58888999876431100 014
Q ss_pred CceEEEEcCc-c---------------c-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV-A---------------E-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~-~---------------~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- . + .-.+.+.+.+.++.+|.++...
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 6899998841 0 1 1235566667777899988765
No 394
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.03 E-value=0.27 Score=44.43 Aligned_cols=95 Identities=16% Similarity=0.067 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccc---ccCCCCcCCCCceEE
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAE---TLGKDVSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~---~~~~~~~~~~~fD~V 196 (289)
++.+||=+|+|. |..++.+|+..++++|+++|.+++.++.++ ++|.+.+ +..+-+ .+... .....+|+|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~v~~~-~~g~g~Dvv 258 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHV--VDARRDPVKQVMEL-TRGRGVNVA 258 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEE--EETTSCHHHHHHHH-TTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCEE--EeccchHHHHHHHH-hCCCCCcEE
Confidence 488999999841 223344555553569999999998877765 4665422 221111 11000 012369999
Q ss_pred EEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+-..-......++.+.+. ++|+++..
T Consensus 259 id~~G~~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 259 MDFVGSQATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EESSCCHHHHHHGGGGEE--EEEEEEEC
T ss_pred EECCCCchHHHHHHHhhc--CCCEEEEE
Confidence 865432111156666666 99998764
No 395
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=92.00 E-value=0.31 Score=41.63 Aligned_cols=77 Identities=12% Similarity=0.071 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-CC-----CCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FR-----EQY 193 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~~-----~~f 193 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+.++..+. ++.++..|+.+...-.. .. +..
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 678898898766 577776543 468999999999888777777666653 68899999876431100 00 468
Q ss_pred eEEEEcC
Q 022962 194 DVAVARA 200 (289)
Q Consensus 194 D~V~sn~ 200 (289)
|+++.|+
T Consensus 85 d~lv~nA 91 (252)
T 3h7a_A 85 EVTIFNV 91 (252)
T ss_dssp EEEEECC
T ss_pred eEEEECC
Confidence 9999884
No 396
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.99 E-value=0.19 Score=45.42 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+||=+|+|. |..++.+|+.. +++|+++|.+++..+.++ +++|.+.+ +-..+.+.+.. ..+.+|+|+-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~---~~lGa~~v-i~~~~~~~~~~---~~~g~D~vid~ 251 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEAL---QDLGADDY-VIGSDQAKMSE---LADSLDYVIDT 251 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHH---TTSCCSCE-EETTCHHHHHH---STTTEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHH---HHcCCcee-eccccHHHHHH---hcCCCCEEEEC
Confidence 478999998742 34444556554 469999999988766554 24665433 11112111111 12469999965
Q ss_pred CcccHHHHHHHHccccccCeEEEEE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.-.. ..++.+.+.|+++|+++..
T Consensus 252 ~g~~--~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 252 VPVH--HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CCSC--CCSHHHHTTEEEEEEEEEC
T ss_pred CCCh--HHHHHHHHHhccCCEEEEe
Confidence 3211 1234455789999998764
No 397
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.94 E-value=0.57 Score=40.96 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=67.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC--hHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM--NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------R 190 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s--~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~ 190 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.+|.+ ....+.+.+..+..+. ++.++.+|+.+...-.. . -
T Consensus 49 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 49 DRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 678999997655 677777653 46899999987 3445555555555553 68888899876421000 0 1
Q ss_pred CCceEEEEcCc-------------c-----------cHHHHHHHHccccccCeEEEEEE
Q 022962 191 EQYDVAVARAV-------------A-----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 191 ~~fD~V~sn~~-------------~-----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+..|+++.|+- . ..-.+.+.+.+.++.+|.++...
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 36899998841 0 12345677778888899988764
No 398
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=91.88 E-value=0.42 Score=40.92 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+++.+ .+.+|+.+ +.+++..+.+.+..+..+. ++.++..|+.+...-.. . -+
T Consensus 8 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 8 NRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 678998997766 577766543 46899988 7777766666665555553 58888999876431100 0 13
Q ss_pred CceEEEEcCc-c-----------------------cHHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV-A-----------------------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~-~-----------------------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- . ..-.+.+.+.+.++++|.++...
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 6899998841 0 12345667777888889888764
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.87 E-value=0.77 Score=40.02 Aligned_cols=102 Identities=10% Similarity=0.115 Sum_probs=66.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChH-HHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNK-RCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~-~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.|+++| +|..+|+.+ .+.+|+.+|.+.. ..+.+.+..+..+. ++.++.+|+.+...-.. + -+
T Consensus 47 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 47 GKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 678999997655 577777653 4689999999865 34444444444443 68899999876421000 0 13
Q ss_pred CceEEEEcCc-------------c-----------cHHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV-------------A-----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~-------------~-----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- . ..-.+++.+.+.++.+|.++...
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 6899998830 0 12345677778888899988764
No 400
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=91.80 E-value=0.55 Score=40.41 Aligned_cols=77 Identities=12% Similarity=0.049 Sum_probs=52.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC------------hHHHHHHHHHHHHcCCCCEEEEeccccccCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM------------NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s------------~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~ 187 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+ .+.++...+..+..+. ++.++..|+.+...-.
T Consensus 13 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 13 GKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESLS 90 (278)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHH
Confidence 678998896655 577776553 47899999987 6666665555555553 6899999987643110
Q ss_pred c-C------CCCceEEEEcC
Q 022962 188 S-F------REQYDVAVARA 200 (289)
Q Consensus 188 ~-~------~~~fD~V~sn~ 200 (289)
. . -+..|+++.|+
T Consensus 91 ~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 0 0 03689999984
No 401
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.62 E-value=1.3 Score=33.77 Aligned_cols=70 Identities=14% Similarity=0.111 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-CCCCceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~~~~fD~V~s 198 (289)
..+|+=+|+ |.+|..+++.. .+.+|+++|.+++.++.+++ . .+.++.+|..+...-.. .-..+|+|+.
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 457888888 56788777653 36799999999987766543 2 35677888765321000 0146899887
Q ss_pred cC
Q 022962 199 RA 200 (289)
Q Consensus 199 n~ 200 (289)
..
T Consensus 77 ~~ 78 (141)
T 3llv_A 77 TG 78 (141)
T ss_dssp CC
T ss_pred ec
Confidence 54
No 402
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.43 E-value=0.67 Score=40.52 Aligned_cols=102 Identities=16% Similarity=0.055 Sum_probs=68.2
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGA-GLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++ +.+|..+|+.+ .+++|+++|.+++..+.+.+..+..+ ++.++..|+.+...-.. + -+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899999865 34566666543 47899999999877666666666555 46788889876431100 0 13
Q ss_pred CceEEEEcCc--------c--------c-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV--------A--------E-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~--------~--------~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- . + .-.+.+.+.+.++.+|.++...
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 6899998841 0 1 1345567777888899998765
No 403
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.35 E-value=0.77 Score=36.89 Aligned_cols=95 Identities=11% Similarity=-0.080 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--C-CCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC-Cc-CCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--P-DWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD-VS-FREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p-~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~-~~-~~~~fD~V 196 (289)
+.+|+=+|+ |..|..+++.. . +.+|+++|.+++.++.+++ .| +.++.+|..+.... .. .-+.+|+|
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g---~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG---RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT---CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC---CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 568888875 67777777543 3 5789999999987765543 33 44566776442110 00 01468999
Q ss_pred EEcCcc-cHHHHHHHHccccccCeEEEEEE
Q 022962 197 VARAVA-EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 197 ~sn~~~-~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+...-. .....+-...+.+.|++.++...
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEeCCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 875322 11112222334456677776543
No 404
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=91.25 E-value=1.2 Score=40.56 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=70.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHCC-CCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACP-DWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p-~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
..+|.=+|||-|..=+......+ +.+++|| |.+++. +++.++++|.. ...|++++.. ..|+|+.-
T Consensus 7 ~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~~---a~~~a~~~gv~----~~~~~~~l~~------~~D~v~i~ 73 (372)
T 4gmf_A 7 KQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSAR---SRELAHAFGIP----LYTSPEQITG------MPDIACIV 73 (372)
T ss_dssp CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSHH---HHHHHHHTTCC----EESSGGGCCS------CCSEEEEC
T ss_pred CCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHHH---HHHHHHHhCCC----EECCHHHHhc------CCCEEEEE
Confidence 56899999997764333222334 4688865 887754 66667777763 3468887742 36776543
Q ss_pred C-c-ccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEe
Q 022962 200 A-V-AEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLL 248 (289)
Q Consensus 200 ~-~-~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~ 248 (289)
. . .....-.+.+..+|+-|=.++++++- ..+|..++.+..++.|....
T Consensus 74 ~p~~~h~~~~~~~a~~al~aGkhVl~EKPl-~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 74 VRSTVAGGAGTQLARHFLARGVHVIQEHPL-HPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp CC--CTTSHHHHHHHHHHHTTCEEEEESCC-CHHHHHHHHHHHHHHTCCEE
T ss_pred CCCcccchhHHHHHHHHHHcCCcEEEecCC-CHHHHHHHHHHHHHcCCEEE
Confidence 1 1 11112233345567778888888875 56778888888888886543
No 405
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=91.16 E-value=0.65 Score=42.76 Aligned_cols=69 Identities=19% Similarity=0.120 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCChHHHHHHHH---C----CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCce
Q 022962 122 NLKLVDVGTGAGLPGLVLAIA---C----PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 194 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~---~----p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD 194 (289)
.-.|+++|.|+|.++..+.+. . ...+++.||+|+...+.-++..... ++|+++ .++++++. ..-
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--~~v~W~-~~l~~lp~------~~~ 151 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--RNIHWH-DSFEDVPE------GPA 151 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--SSEEEE-SSGGGSCC------SSE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--CCeEEe-CChhhcCC------CCe
Confidence 457999999999988776543 1 2458999999997765433332222 257765 34555532 245
Q ss_pred EEEEc
Q 022962 195 VAVAR 199 (289)
Q Consensus 195 ~V~sn 199 (289)
+|++|
T Consensus 152 ~viAN 156 (387)
T 1zkd_A 152 VILAN 156 (387)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 66677
No 406
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.00 E-value=1.6 Score=34.95 Aligned_cols=94 Identities=16% Similarity=0.153 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~V~sn 199 (289)
.+-|||+|-|+|.-=--|...+|+..|+.+|.--.. .-.. --+.-.++.+|+.+.... .-+..+.-++.+.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~------hp~~-~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD 113 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS------HPDS-TPPEAQLILGDIRETLPATLERFGATASLVHAD 113 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC------CGGG-CCCGGGEEESCHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc------CCCC-CCchHheecccHHHHHHHHHHhcCCceEEEEee
Confidence 457999999999866667778999999999953100 0000 001123455555542110 0012223333332
Q ss_pred --------CcccHHHHHHHHccccccCeEEE
Q 022962 200 --------AVAEMRILAEYCLPLVRVGGLFV 222 (289)
Q Consensus 200 --------~~~~~~~ll~~~~~~LkpgG~l~ 222 (289)
..+....+-.-+..+|.|||.++
T Consensus 114 ~G~g~~~~d~a~a~~lsplI~~~la~GGi~v 144 (174)
T 3iht_A 114 LGGHNREKNDRFARLISPLIEPHLAQGGLMV 144 (174)
T ss_dssp CCCSCHHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred cCCCCcchhHHHHHhhhHHHHHHhcCCcEEE
Confidence 12233455567788999999976
No 407
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.98 E-value=0.54 Score=40.59 Aligned_cols=77 Identities=13% Similarity=-0.007 Sum_probs=53.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-.. . -+.
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 28 KQVAIVTGASRG-IGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 678888886555 577776543 468999999999888777776666654 57788888876421100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 106 iD~lvnnA 113 (270)
T 3ftp_A 106 LNVLVNNA 113 (270)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 408
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.85 E-value=0.34 Score=43.85 Aligned_cols=94 Identities=16% Similarity=0.068 Sum_probs=54.3
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 121 SNLKLVDVGTGA-GLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 121 ~~~~VLDiGcG~-G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
++.+||=+|+|. |..++.+|+.. +++|+++|.+++..+.++ +.+|.+.+ +-..+.+.+.. ..+.+|+|+-.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~---~~lGa~~v-~~~~~~~~~~~---~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEAL---KNFGADSF-LVSRDQEQMQA---AAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHH---HTSCCSEE-EETTCHHHHHH---TTTCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH---HhcCCceE-EeccCHHHHHH---hhCCCCEEEEC
Confidence 478999998642 34444555554 569999999988766554 24565322 11112111111 11469999976
Q ss_pred CcccHHHHHHHHccccccCeEEEEE
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
.-.. ..++.+.+.|+++|+++..
T Consensus 259 ~g~~--~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 259 VSAV--HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp CSSC--CCSHHHHHHEEEEEEEEEC
T ss_pred CCcH--HHHHHHHHHHhcCCEEEEE
Confidence 3221 0123444678999998754
No 409
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.80 E-value=0.97 Score=39.10 Aligned_cols=78 Identities=15% Similarity=0.003 Sum_probs=55.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc-CCCCc-------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDVS-------FRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~-~~~~~-------~~~ 191 (289)
+.+||=.|+++| +|..+|+.+ .+.+|++++.++...+.+.+..+..+-.++.++..|+.+. ..-.. ..+
T Consensus 12 ~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 12 RRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 678888887655 677777653 4689999999998877776666665555799999999775 21000 013
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 91 ~iD~lv~nA 99 (311)
T 3o26_A 91 KLDILVNNA 99 (311)
T ss_dssp SCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999995
No 410
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=90.80 E-value=0.47 Score=40.78 Aligned_cols=77 Identities=17% Similarity=0.035 Sum_probs=53.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHH-cCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSL-TQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~-~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.|+++| +|..+++.+ .+++|+++|.+++.++.+.+.... .+ .++.++..|+.+...-.. . -+
T Consensus 20 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 20 GKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 678888887665 577776653 468999999999887776665544 34 368999999987532100 0 13
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 98 ~id~lv~nA 106 (266)
T 4egf_A 98 GLDVLVNNA 106 (266)
T ss_dssp SCSEEEEEC
T ss_pred CCCEEEECC
Confidence 689999884
No 411
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.79 E-value=0.48 Score=42.39 Aligned_cols=79 Identities=6% Similarity=-0.048 Sum_probs=51.5
Q ss_pred CEEEE-eccccccCCCCcCCCCceEEEEcC---cc------------cHHHHHHHHccccccCeEEEEEEcCCcH-----
Q 022962 172 NVQIV-RGRAETLGKDVSFREQYDVAVARA---VA------------EMRILAEYCLPLVRVGGLFVAAKGHDPQ----- 230 (289)
Q Consensus 172 ni~~~-~~d~~~~~~~~~~~~~fD~V~sn~---~~------------~~~~ll~~~~~~LkpgG~l~~~~g~~~~----- 230 (289)
..+++ ++|..+.... ..+++||+|++.. .. .+...+.++.++|+|||.+++..+....
T Consensus 38 ~~~l~i~gD~l~~L~~-l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~ 116 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAK-LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGS 116 (319)
T ss_dssp EEEEEEECCHHHHHHT-SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTB
T ss_pred cceEEECCcHHHHHHh-CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccccccc
Confidence 36777 9998764221 1246899999983 11 2467778889999999999998775433
Q ss_pred HHHHHHHHHHHHhC-CeEeEEe
Q 022962 231 EEVKNSERAVQLMG-ASLLQLC 251 (289)
Q Consensus 231 ~ei~~~~~~l~~~g-~~~~~~~ 251 (289)
..+..+...+...| +......
T Consensus 117 ~~l~~l~~~i~~~G~~~~~~~I 138 (319)
T 1eg2_A 117 GDLISIISHMRQNSKMLLANLI 138 (319)
T ss_dssp CCHHHHHHHHHHHCCCEEEEEE
T ss_pred ccHHHHHHHHhCcccceeEEEE
Confidence 11223344455667 8776654
No 412
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=90.79 E-value=0.53 Score=40.62 Aligned_cols=77 Identities=14% Similarity=0.014 Sum_probs=54.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-.. .-+.
T Consensus 4 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 567888887765 577776543 478999999999888877776666553 58888888876421100 0136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 82 iD~lVnnA 89 (264)
T 3tfo_A 82 IDVLVNNA 89 (264)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 413
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.73 E-value=1.9 Score=37.57 Aligned_cols=79 Identities=9% Similarity=-0.062 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEE-eccccccCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIV-RGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~-~~d~~~~~~~~~~~~~fD~V~ 197 (289)
++.+||=.|+ +|.+|..++..+ .+.+|++++.+......+........-.+++++ .+|+.+...-...-+.+|+|+
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 3678998886 577888877543 467999999988765544443322211468888 789876532211113689999
Q ss_pred EcC
Q 022962 198 ARA 200 (289)
Q Consensus 198 sn~ 200 (289)
.++
T Consensus 89 h~A 91 (342)
T 1y1p_A 89 HIA 91 (342)
T ss_dssp ECC
T ss_pred EeC
Confidence 874
No 414
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=90.64 E-value=0.89 Score=38.59 Aligned_cols=77 Identities=13% Similarity=0.127 Sum_probs=51.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cC------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SF------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~------~~~ 192 (289)
+.++|=.|++ |.+|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-. .+ -+.
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3567778865 45677777643 468999999998877666555555443 5888888987642100 00 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 80 id~lv~nA 87 (256)
T 1geg_A 80 FDVIVNNA 87 (256)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 415
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=90.61 E-value=2.2 Score=39.67 Aligned_cols=117 Identities=9% Similarity=0.059 Sum_probs=70.5
Q ss_pred CCeEEEEcCCCChHHHHHH---HHCCCCEEE-EEeCChHHHHHHHHHHHHcCCCCEEEEec---cccccCCCCcCCCCce
Q 022962 122 NLKLVDVGTGAGLPGLVLA---IACPDWKVT-LLESMNKRCVFLEHAVSLTQLLNVQIVRG---RAETLGKDVSFREQYD 194 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la---~~~p~~~V~-~iD~s~~~l~~a~~~~~~~~l~ni~~~~~---d~~~~~~~~~~~~~fD 194 (289)
..+|.=||||. +|...+ ...++.+++ .+|.+++..+.+.+...+.|+..+.+... |.+++... ...|
T Consensus 20 ~~rvgiIG~G~--~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~----~~vD 93 (444)
T 2ixa_A 20 KVRIAFIAVGL--RGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD----KNID 93 (444)
T ss_dssp CEEEEEECCSH--HHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC----TTCC
T ss_pred CceEEEEecCH--HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC----CCCC
Confidence 35788888873 332222 234777876 55999887766665555566544554432 66665432 3589
Q ss_pred EEEEcCcc-cHHHHHHHHccccccCeEEEEEEcC-CcHHHHHHHHHHHHHhCCeE
Q 022962 195 VAVARAVA-EMRILAEYCLPLVRVGGLFVAAKGH-DPQEEVKNSERAVQLMGASL 247 (289)
Q Consensus 195 ~V~sn~~~-~~~~ll~~~~~~LkpgG~l~~~~g~-~~~~ei~~~~~~l~~~g~~~ 247 (289)
+|+..... ....+. ..+|+.|-.++++++. ...++..++.+..++.|..+
T Consensus 94 ~V~i~tp~~~h~~~~---~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~ 145 (444)
T 2ixa_A 94 AVFVSSPWEWHHEHG---VAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPL 145 (444)
T ss_dssp EEEECCCGGGHHHHH---HHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCE
T ss_pred EEEEcCCcHHHHHHH---HHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 99866432 222333 3456677777887753 45667777777777777654
No 416
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.58 E-value=0.23 Score=46.25 Aligned_cols=95 Identities=12% Similarity=0.030 Sum_probs=59.6
Q ss_pred CCCCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEec--cc--------------
Q 022962 119 CNSNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRG--RA-------------- 180 (289)
Q Consensus 119 ~~~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~--d~-------------- 180 (289)
++++.+||=.|++ .|..++.+|+.. +++|++++.+++.++.++ ++|.+.+ +-.. +.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~----~lGa~~~-i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVR----ALGCDLV-INRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCCCE-EEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----hcCCCEE-Eecccccccccccccccccchh
Confidence 3458899999973 344555566654 579999999998887764 4565432 1111 11
Q ss_pred -----cccCCCCcCCCCceEEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 181 -----ETLGKDVSFREQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 181 -----~~~~~~~~~~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+.+.. .....+|+|+-+.-. ..++.+.+.|+++|+++..
T Consensus 292 ~~~~~~~v~~--~~g~g~Dvvid~~G~---~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 292 GRKLAKLVVE--KAGREPDIVFEHTGR---VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHH--HHSSCCSEEEECSCH---HHHHHHHHHSCTTCEEEES
T ss_pred hhHHHHHHHH--HhCCCceEEEECCCc---hHHHHHHHHHhcCCEEEEE
Confidence 00100 012469999976433 2566777889999998864
No 417
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.52 E-value=0.61 Score=40.08 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=66.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC-hHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM-NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s-~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.++.+ .+..+.+.+..+..+. ++.++..|+.+...-.. . -+
T Consensus 18 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 18 GKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 678998897655 577776543 46899988764 5555555555555553 68899999876431100 0 13
Q ss_pred CceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- .+ .-.+.+.+.+.++++|.+++..
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 6899998841 01 2345566777777899988764
No 418
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=90.46 E-value=0.62 Score=40.32 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=54.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C-----CCCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F-----REQY 193 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~-----~~~f 193 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+.....+. ++.++..|+.+...-.. . .+..
T Consensus 33 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 33 GRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 678888887655 577776653 468999999998877777666666553 68899999876532100 0 0468
Q ss_pred eEEEEcC
Q 022962 194 DVAVARA 200 (289)
Q Consensus 194 D~V~sn~ 200 (289)
|+++.|+
T Consensus 111 D~lvnnA 117 (275)
T 4imr_A 111 DILVINA 117 (275)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9999984
No 419
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.42 E-value=1.4 Score=33.09 Aligned_cols=93 Identities=14% Similarity=0.179 Sum_probs=52.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCCCCceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~~~fD~V~s 198 (289)
+.+|+=+|+ |.+|..++... .+.+|+++|.+++.++.+++ .. ++.++.+|..+..... ..-..+|+|+.
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EI---DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HC---SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hc---CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 457887876 77887777543 35799999999877654432 22 3456667654321100 00146899887
Q ss_pred cCcc-cHHHHHHHHccccccCeEEEE
Q 022962 199 RAVA-EMRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 199 n~~~-~~~~ll~~~~~~LkpgG~l~~ 223 (289)
..-. .....+..+.+.+.++ .+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTGKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCSCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred eeCCchHHHHHHHHHHHcCCC-EEEE
Confidence 6422 2233333444456665 4444
No 420
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=90.34 E-value=0.82 Score=39.43 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=65.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC-hHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM-NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s-~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.+|.+ .+..+.+.+..+..+. ++.++.+|+.+...-.. . -+
T Consensus 31 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 31 GKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 678999998765 577776543 46899998665 4555555555555553 68889999876431100 0 13
Q ss_pred CceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- .+ .-.+++.+.+.++.+|.++...
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 6899999841 01 2245566677778889988764
No 421
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.32 E-value=1.2 Score=36.40 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=46.5
Q ss_pred eEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcC
Q 022962 124 KLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARA 200 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~ 200 (289)
+||=.|+ +|.+|..++..+ .+.+|++++.++..+... .-.+++++.+|+.+... ..+ +.+|+|+.++
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~~D~~d~~~-~~~-~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LGATVATLVKEPLVLTE-ADL-DSVDAVVDAL 70 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TCTTSEEEECCGGGCCH-HHH-TTCSEEEECC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cCCCceEEecccccccH-hhc-ccCCEEEECC
Confidence 4666674 678888877653 468999999998654322 12368999999987643 112 4689999885
No 422
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.24 E-value=0.8 Score=40.55 Aligned_cols=78 Identities=12% Similarity=-0.058 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCC-CEEEEeccccccCCCCc-------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLL-NVQIVRGRAETLGKDVS-------FRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~-ni~~~~~d~~~~~~~~~-------~~~ 191 (289)
+.+||=.|+++| +|..+++.+ .+.+|++++.++..++.+.+.....+.. ++.++..|+.+...-.. .-+
T Consensus 8 ~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 678999998766 577776653 4689999999998888777766655532 68899999876431000 014
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 87 ~id~lv~nA 95 (319)
T 3ioy_A 87 PVSILCNNA 95 (319)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 689999984
No 423
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.22 E-value=0.71 Score=39.83 Aligned_cols=77 Identities=13% Similarity=-0.053 Sum_probs=52.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeC-------------ChHHHHHHHHHHHHcCCCCEEEEeccccccCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLES-------------MNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 186 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~-------------s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~ 186 (289)
+.++|=.|+++| +|..+|+.+ .+++|+++|. +++.++.+.+..+..+. ++.++..|+.+...-
T Consensus 15 gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 15 GRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAAL 92 (280)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHH
Confidence 678998898766 577776553 4789999998 67776666666665553 688889998764311
Q ss_pred Cc-C------CCCceEEEEcC
Q 022962 187 VS-F------REQYDVAVARA 200 (289)
Q Consensus 187 ~~-~------~~~fD~V~sn~ 200 (289)
.. . -+..|+++.|+
T Consensus 93 ~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 00 0 13689999984
No 424
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=90.11 E-value=0.68 Score=39.66 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCCh---HHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMN---KRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------ 189 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~---~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------ 189 (289)
+.++|=.|+++| +|..+|+.+ .+++|+.++.+. +.++.+.+..+..+. ++.++..|+.+...-.. +
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 678998898766 577877654 468999987654 344444444444342 58889999876431100 0
Q ss_pred CCCceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 190 REQYDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 190 ~~~fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
-+..|+++.|+- .+ .-.+.+.+.+.++++|.+++..
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 136899999841 11 2345567777788889988764
No 425
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.99 E-value=0.49 Score=40.99 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=54.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++| +|..+++.+ .+++|+++|.+++.++.+.+..+..+. ++.++..|+.+...-.. . -+.
T Consensus 32 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 32 GKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 678998887755 577776543 468999999999887777766666553 68888999876431100 0 036
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 110 iD~lvnnA 117 (276)
T 3r1i_A 110 IDIAVCNA 117 (276)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 426
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=89.80 E-value=5.6 Score=36.22 Aligned_cols=77 Identities=17% Similarity=0.168 Sum_probs=49.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChH---HHHHHHHHHHHc--------CCCCEEEEeccccccCCCCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNK---RCVFLEHAVSLT--------QLLNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~---~l~~a~~~~~~~--------~l~ni~~~~~d~~~~~~~~~ 188 (289)
+.+||=.|+ +|.+|..+++.+ .+.+|++++.++. ..+...+..+.. ...++.++.+|+.+...-.
T Consensus 69 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 69 LGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 568888885 678888887664 3578999998876 433333333222 1136999999998743211
Q ss_pred CCCCceEEEEcC
Q 022962 189 FREQYDVAVARA 200 (289)
Q Consensus 189 ~~~~fD~V~sn~ 200 (289)
....+|.|+.++
T Consensus 147 ~~~~~d~Vih~A 158 (427)
T 4f6c_A 147 LPENMDTIIHAG 158 (427)
T ss_dssp CSSCCSEEEECC
T ss_pred CcCCCCEEEECC
Confidence 235789999874
No 427
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=89.76 E-value=0.55 Score=39.51 Aligned_cols=77 Identities=12% Similarity=-0.005 Sum_probs=52.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cCC------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SFR------EQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~~------~~ 192 (289)
+.+||=.|+ +|.+|..+++.+ .+.+|+++|.++..++...+..+..+. ++.++.+|+.+...-. .+. +.
T Consensus 11 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 11 GKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 668887785 566788887653 468999999998877666555555443 6888889987642110 000 36
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
+|+|+.++
T Consensus 89 ~d~vi~~A 96 (255)
T 1fmc_A 89 VDILVNNA 96 (255)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 428
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=89.70 E-value=1.2 Score=38.58 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=52.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeC-ChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLES-MNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~-s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.+|. +++.++.+.+.....+. ++.++..|+.+...-.. . -+
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 678888897665 577766543 4689999995 77666666555555553 68999999987532100 0 03
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 107 ~iD~lvnnA 115 (280)
T 4da9_A 107 RIDCLVNNA 115 (280)
T ss_dssp CCCEEEEEC
T ss_pred CCCEEEECC
Confidence 689999884
No 429
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=89.69 E-value=1.9 Score=37.60 Aligned_cols=99 Identities=16% Similarity=0.080 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------cCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-------SFREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-------~~~~~ 192 (289)
++.+|=-|.++| +|..+|+.+ .+++|+.+|.+++.++.+ +++++- ++..+.+|+.+...-. ..-+.
T Consensus 29 gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~---~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 29 AKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAA---IAEIGG-GAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCT-TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHcCC-CeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 778888898877 577766653 578999999999876544 444553 5777888887642110 00147
Q ss_pred ceEEEEcC------------cc-----------cHHHHHHHHccccccCeEEEEEE
Q 022962 193 YDVAVARA------------VA-----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 193 fD~V~sn~------------~~-----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
.|+++.|+ .+ ..-.+.+.+.+.++.+|.++...
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 89999984 01 12345577888999999988654
No 430
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.63 E-value=0.63 Score=39.35 Aligned_cols=77 Identities=16% Similarity=0.028 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.+||=.|+++| +|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-.. + -+.
T Consensus 9 ~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 9 NKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 678998897554 677777653 468999999999888777776666543 68888999876431100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 87 id~li~~A 94 (253)
T 3qiv_A 87 IDYLVNNA 94 (253)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 431
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=89.62 E-value=0.83 Score=38.65 Aligned_cols=77 Identities=16% Similarity=0.090 Sum_probs=50.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeC-ChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLES-MNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~-s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.|++ |.+|..+++.+ .+.+|++++. ++..++...+..+..+. ++.++.+|+.+...-.. . -+
T Consensus 7 ~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 7 GKVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5688888865 56687777643 4689999999 77666555555554442 58888899876421000 0 02
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+|+.|+
T Consensus 85 ~id~li~~A 93 (261)
T 1gee_A 85 KLDVMINNA 93 (261)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 432
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.58 E-value=2.1 Score=37.48 Aligned_cols=112 Identities=15% Similarity=0.171 Sum_probs=67.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
..+|.=||+| .+|..+|... .+.+|+++|.+++.++.+.+ .|.. ....+..+.. ...|+|+..
T Consensus 7 ~~~I~iIG~G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~---~~~~~~~e~~------~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLG--SMGMGAARSCLRAGLSTWGADLNPQACANLLA----EGAC---GAAASAREFA------GVVDALVIL 71 (303)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EEESSSTTTT------TTCSEEEEC
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----cCCc---cccCCHHHHH------hcCCEEEEE
Confidence 3578888764 6666666432 35799999999987766544 2431 1233443332 357999876
Q ss_pred Ccc--cHHHHH---HHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeE
Q 022962 200 AVA--EMRILA---EYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 200 ~~~--~~~~ll---~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
-.. ..+.++ +.+...+++|..++- .+.........+.+.+...|...+.
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~-~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMV-SSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEE-CSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEe-cCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 432 355565 666677888777654 3334444445555666667766554
No 433
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.57 E-value=1.2 Score=39.31 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=55.7
Q ss_pred CCCeEEEEc-CC-CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEEE
Q 022962 121 SNLKLVDVG-TG-AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVAV 197 (289)
Q Consensus 121 ~~~~VLDiG-cG-~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V~ 197 (289)
++.+||=+| +| .|..++.+|+.. +++|++++. ++..+.+ +++|.+. ++..+-.+ +... -..+|+|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~-~~~~~~~----~~lGa~~--~i~~~~~~~~~~~---~~g~D~v~ 220 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTAS-KRNHAFL----KALGAEQ--CINYHEEDFLLAI---STPVDAVI 220 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEEC-HHHHHHH----HHHTCSE--EEETTTSCHHHHC---CSCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEec-cchHHHH----HHcCCCE--EEeCCCcchhhhh---ccCCCEEE
Confidence 488999886 44 466667777776 569999985 4444444 4567642 22222111 2111 14699998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-..-. ..+ ..+.++|+++|+++..
T Consensus 221 d~~g~--~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 221 DLVGG--DVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp ESSCH--HHH-HHHGGGEEEEEEEEEC
T ss_pred ECCCc--HHH-HHHHHhccCCCEEEEe
Confidence 65322 223 7788999999999864
No 434
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=89.51 E-value=1.1 Score=38.06 Aligned_cols=74 Identities=14% Similarity=-0.023 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------cCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-------SFREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-------~~~~~ 192 (289)
+.++|=.|+++ .+|..+++.+ .+.+|+++|.+.+.++.+.+ ..+ .++.++..|+.+...-. ..-+.
T Consensus 8 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 8 GKSALITGSAR-GIGRAFAEAYVREGATVAIADIDIERARQAAA---EIG-PAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHC-TTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhC-CCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 67899889654 4677776653 46899999999876554433 333 25888899987643110 00137
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 83 id~lv~~A 90 (259)
T 4e6p_A 83 LDILVNNA 90 (259)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 435
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.45 E-value=0.7 Score=39.70 Aligned_cols=77 Identities=13% Similarity=-0.045 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.+||=.|++ |.+|..+++.+ .+.+|+++|.++..++.+.+..+..+. ++.++.+|+.+...-.. . -+.
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 6788888865 55788877653 468999999998877766665555543 68899999876421000 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
+|+|+.|+
T Consensus 109 iD~li~~A 116 (272)
T 1yb1_A 109 VSILVNNA 116 (272)
T ss_dssp CSEEEECC
T ss_pred CcEEEECC
Confidence 89999884
No 436
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.34 E-value=3.4 Score=35.17 Aligned_cols=90 Identities=10% Similarity=0.026 Sum_probs=60.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
..+||=.| + |.+|..++... .+.+|++++.++........ .+++++.+|+.++. -..+|.|+..
T Consensus 5 ~~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----~~~~d~vi~~ 70 (286)
T 3ius_A 5 TGTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----LDGVTHLLIS 70 (286)
T ss_dssp CCEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred cCcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----cCCCCEEEEC
Confidence 35899999 4 99999988654 35799999999876543332 36899999998865 1568999987
Q ss_pred Ccc------cHHHHHHHHccccccCeEEEEEE
Q 022962 200 AVA------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 200 ~~~------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
+-. ....+++.+...-..-+++++..
T Consensus 71 a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~S 102 (286)
T 3ius_A 71 TAPDSGGDPVLAALGDQIAARAAQFRWVGYLS 102 (286)
T ss_dssp CCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEE
T ss_pred CCccccccHHHHHHHHHHHhhcCCceEEEEee
Confidence 521 13455555444212335666544
No 437
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.26 E-value=0.94 Score=39.15 Aligned_cols=77 Identities=12% Similarity=0.039 Sum_probs=51.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC----------------hHHHHHHHHHHHHcCCCCEEEEecccccc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM----------------NKRCVFLEHAVSLTQLLNVQIVRGRAETL 183 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s----------------~~~l~~a~~~~~~~~l~ni~~~~~d~~~~ 183 (289)
+.++|=.|+++| +|..+|+.+ .+++|+++|.+ ++.++.+.+..+..+. ++.++..|+.+.
T Consensus 11 ~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~ 88 (286)
T 3uve_A 11 GKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRDY 88 (286)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCCH
Confidence 678999998776 577766553 47899999987 5565555554544443 688999998764
Q ss_pred CCCCc-C------CCCceEEEEcC
Q 022962 184 GKDVS-F------REQYDVAVARA 200 (289)
Q Consensus 184 ~~~~~-~------~~~fD~V~sn~ 200 (289)
..-.. . -+..|+++.|+
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECC
Confidence 31100 0 13689999884
No 438
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.09 E-value=3.7 Score=36.30 Aligned_cols=113 Identities=11% Similarity=0.015 Sum_probs=65.3
Q ss_pred CeEEEEcCCCChHHHHHHHH--CCC-CEEEEEeCChH---HHHHHHHHHHHcCCCCEEEEec-cccccCCCCcCCCCceE
Q 022962 123 LKLVDVGTGAGLPGLVLAIA--CPD-WKVTLLESMNK---RCVFLEHAVSLTQLLNVQIVRG-RAETLGKDVSFREQYDV 195 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~--~p~-~~V~~iD~s~~---~l~~a~~~~~~~~l~ni~~~~~-d~~~~~~~~~~~~~fD~ 195 (289)
.+|.=||+ |.+|..+|.. ..+ .+|+++|.+++ ..+...+.+...|. .. +..+.. ...|+
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~------~~~s~~e~~------~~aDv 90 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV------EPLDDVAGI------ACADV 90 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC------EEESSGGGG------GGCSE
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC------CCCCHHHHH------hcCCE
Confidence 46878876 5666666654 235 69999999973 11112222233343 22 333332 34688
Q ss_pred EEEc-CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEE
Q 022962 196 AVAR-AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 196 V~sn-~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
|+.. ........++.+...+++|..++-. +.........+.+.+...|...+..
T Consensus 91 Vi~avp~~~~~~~~~~i~~~l~~~~ivv~~-st~~p~~~~~~~~~l~~~g~~~~d~ 145 (317)
T 4ezb_A 91 VLSLVVGAATKAVAASAAPHLSDEAVFIDL-NSVGPDTKALAAGAIATGKGSFVEG 145 (317)
T ss_dssp EEECCCGGGHHHHHHHHGGGCCTTCEEEEC-CSCCHHHHHHHHHHHHTSSCEEEEE
T ss_pred EEEecCCHHHHHHHHHHHhhcCCCCEEEEC-CCCCHHHHHHHHHHHHHcCCeEEec
Confidence 8876 3334455668888889888766543 3334444455556666777765543
No 439
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=89.06 E-value=1 Score=38.35 Aligned_cols=102 Identities=19% Similarity=0.128 Sum_probs=63.7
Q ss_pred CCeEEEEcCC-CChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTG-AGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG-~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|++ +|.+|..+++.+ .+.+|+++|.+++.-+.+++..+..+ ++.++.+|+.+...-.. + -+
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6789999986 366787776543 36899999998753233333333333 47788888876421100 0 03
Q ss_pred CceEEEEcCc-c---------------cH-----------HHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV-A---------------EM-----------RILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~-~---------------~~-----------~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- . ++ -.+++.+.+.++.+|+++...
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 146 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLT 146 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEE
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 6899998841 0 11 245567777777788988765
No 440
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=88.97 E-value=0.75 Score=39.59 Aligned_cols=102 Identities=16% Similarity=0.093 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.+ +.+++..+.+.+..+..+. ++.++..|+.+...-.. . -+
T Consensus 27 ~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 27 NKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 678888897766 466666543 36788887 4556666666555555553 68888999876431100 0 13
Q ss_pred CceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- .+ .-.+++.+.+.++.+|.++...
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 7899999840 01 1234566677778889988764
No 441
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=88.81 E-value=1.1 Score=39.66 Aligned_cols=77 Identities=10% Similarity=0.039 Sum_probs=51.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC------------hHHHHHHHHHHHHcCCCCEEEEeccccccCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM------------NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s------------~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~ 187 (289)
+.++|=.|+++| +|..+|+.+ .+++|+++|.+ .+.++.+.+..+..+. ++.++..|+.+...-.
T Consensus 46 gk~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 46 GKVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASLQ 123 (317)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHH
Confidence 678888887766 577766553 47899999986 5555555555555553 6889999987643110
Q ss_pred c-C------CCCceEEEEcC
Q 022962 188 S-F------REQYDVAVARA 200 (289)
Q Consensus 188 ~-~------~~~fD~V~sn~ 200 (289)
. . -+..|+++.|+
T Consensus 124 ~~~~~~~~~~g~iD~lVnnA 143 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNV 143 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 0 0 13689999984
No 442
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=88.56 E-value=1.2 Score=37.18 Aligned_cols=77 Identities=18% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHH-HcCCCCEEEEeccccccCCCCc-CC------C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVS-LTQLLNVQIVRGRAETLGKDVS-FR------E 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~-~~~l~ni~~~~~d~~~~~~~~~-~~------~ 191 (289)
+.++|=.|+++ .+|..+++.+ .+.+|++++.+.+.++.+.+... ..+ .++.++..|+.+...-.. .. +
T Consensus 2 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASR-GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 45788888654 4677777653 46899999999887776655544 334 368899999876431100 11 3
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 80 ~id~li~~A 88 (235)
T 3l77_A 80 DVDVVVANA 88 (235)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 443
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.43 E-value=1.2 Score=38.24 Aligned_cols=77 Identities=13% Similarity=-0.037 Sum_probs=52.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC--------cCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV--------SFRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~--------~~~~ 191 (289)
+.++|=.|+++ .+|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-. .+++
T Consensus 21 ~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 21 GTTALVTGGSK-GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEECCcc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 67899889754 5677777653 468999999998877666555555443 6888899987642110 0115
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 99 ~id~lv~nA 107 (273)
T 1ae1_A 99 KLNILVNNA 107 (273)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECC
Confidence 689999984
No 444
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.39 E-value=0.83 Score=39.28 Aligned_cols=78 Identities=15% Similarity=0.038 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCC-CCEEEEeccccccCCCC-cC------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQL-LNVQIVRGRAETLGKDV-SF------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l-~ni~~~~~d~~~~~~~~-~~------~~ 191 (289)
+.+||=.|++ |.+|..+++.+ .+.+|++++.++..++.+.+.++..+. .++.++.+|+.+...-. .+ -+
T Consensus 32 ~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 6788888865 55677777643 468999999998877766666665554 35888888987643100 00 03
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
.+|+|+.|+
T Consensus 111 ~iD~vi~~A 119 (279)
T 1xg5_A 111 GVDICINNA 119 (279)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 445
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=88.35 E-value=0.47 Score=41.25 Aligned_cols=77 Identities=14% Similarity=0.066 Sum_probs=52.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+.+...+ .++.++..|+.+...-.. . -+.
T Consensus 8 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 8 GKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 678888887765 577776543 46899999999988776665554433 368888888876421100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 86 iD~lvnnA 93 (280)
T 3tox_A 86 LDTAFNNA 93 (280)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 446
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.29 E-value=0.32 Score=43.67 Aligned_cols=93 Identities=12% Similarity=0.125 Sum_probs=51.1
Q ss_pred CCCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceE
Q 022962 120 NSNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDV 195 (289)
Q Consensus 120 ~~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~ 195 (289)
+++.+||=.|++ .|..++.+|+...+.+|++++ +++..+.++ +|.+.+ +. +-.++... ....+.+|+
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~--~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHL--FD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEE--EE-TTSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEE--Ec-CCccHHHHHHHhcCCCceE
Confidence 358899999984 344555566555567999999 444434332 455422 22 11111100 001257999
Q ss_pred EEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 196 AVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 196 V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
|+-..-.. .+..+.++|+++|++++.
T Consensus 212 v~d~~g~~---~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 212 VLDCLCGD---NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEEECC----------CTTEEEEEEEEEE
T ss_pred EEECCCch---hHHHHHHHhhcCCEEEEE
Confidence 99543221 236788999999999864
No 447
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.07 E-value=1.7 Score=37.44 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=57.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--------CcCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--------VSFRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--------~~~~~ 191 (289)
++.+|=-|.++|+ |..+|+.+ .+++|+.+|.+++.++.+.+.++..|. ++.+++.|+.+...- ..+ +
T Consensus 7 gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~-G 83 (254)
T 4fn4_A 7 NKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETY-S 83 (254)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 7888888987774 66666553 478999999999998888888877774 688899998764311 011 4
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 84 ~iDiLVNNA 92 (254)
T 4fn4_A 84 RIDVLCNNA 92 (254)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 789999884
No 448
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=87.84 E-value=1.2 Score=37.75 Aligned_cols=77 Identities=10% Similarity=-0.037 Sum_probs=52.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC--------cCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV--------SFRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~--------~~~~ 191 (289)
+.+||=.|++ |.+|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++.+|+.+...-. .+.+
T Consensus 9 ~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 9 GCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6788988875 45677776543 468999999998877665555554443 5888889987642100 0114
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 87 ~id~lv~~A 95 (260)
T 2ae2_A 87 KLNILVNNA 95 (260)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 449
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.82 E-value=0.59 Score=40.05 Aligned_cols=78 Identities=15% Similarity=-0.014 Sum_probs=55.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|.++| +|..+|+.+ .+.+|+.+|.+++.++.+.+..+..+..++.++..|+.+...-.. . -+.
T Consensus 10 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 10 GRSVVVTGGTKG-IGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 678888887655 677777653 468999999999888777766666554478999999876431100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 89 id~lvnnA 96 (262)
T 3pk0_A 89 IDVVCANA 96 (262)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 450
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.74 E-value=0.46 Score=42.78 Aligned_cols=100 Identities=8% Similarity=0.006 Sum_probs=55.2
Q ss_pred CCC-CeEEEEcC--CCChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccc--cccCC---CCc--C
Q 022962 120 NSN-LKLVDVGT--GAGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRA--ETLGK---DVS--F 189 (289)
Q Consensus 120 ~~~-~~VLDiGc--G~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~--~~~~~---~~~--~ 189 (289)
+++ .+||=.|+ |.|..++.+|+.. +++|+++..+.+.+...++.++++|.+.+ +-..+. .++.. ... .
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQV-ITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEE-EEHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEE-EecCccchHHHHHHHHHHhhcc
Confidence 347 89999987 3455666677664 56888887655442222334456776432 111110 11100 000 0
Q ss_pred CCCceEEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 190 REQYDVAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 190 ~~~fD~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
...+|+|+-..-. ..+. .+.++|+++|+++..
T Consensus 243 ~~g~Dvvid~~G~--~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 243 GGEAKLALNCVGG--KSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp TCCEEEEEESSCH--HHHH-HHHHTSCTTCEEEEC
T ss_pred CCCceEEEECCCc--hhHH-HHHHHhccCCEEEEe
Confidence 2469999865422 1223 556899999998864
No 451
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.70 E-value=1.6 Score=39.50 Aligned_cols=96 Identities=11% Similarity=0.098 Sum_probs=57.2
Q ss_pred CCCCeEEEEcC-C-CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEE
Q 022962 120 NSNLKLVDVGT-G-AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAV 197 (289)
Q Consensus 120 ~~~~~VLDiGc-G-~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~ 197 (289)
+++.+||=.|+ | .|..++.+|+.. +++|++++ +++..+.+ +++|.+.+ +..+-.++.........+|+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~----~~lGa~~v--~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELV----RKLGADDV--IDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHH----HHTTCSEE--EETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHH----HHcCCCEE--EECCchHHHHHHhhcCCCCEEE
Confidence 35889999994 3 455666667665 56999999 66655544 45675422 2211111110000014699998
Q ss_pred EcCcccHHHHHHHHccccccCeEEEEE
Q 022962 198 ARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 198 sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
-+.-.. ...+..+.+.|+++|+++..
T Consensus 254 d~~g~~-~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 254 DNVGGS-TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp ESSCTT-HHHHGGGGBCSSSCCEEEES
T ss_pred ECCCCh-hhhhHHHHHhhcCCcEEEEe
Confidence 664332 13457778899999998764
No 452
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.56 E-value=1.7 Score=40.74 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=56.4
Q ss_pred eEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHH------------H-HcCCCCEEEEeccccccCCCCc
Q 022962 124 KLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAV------------S-LTQLLNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~------------~-~~~l~ni~~~~~d~~~~~~~~~ 188 (289)
+|.=||+ |.+|..+|..+ .+.+|+++|++++.++.+++.. + .....++++ ..|..+..
T Consensus 4 kI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~---- 76 (450)
T 3gg2_A 4 DIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV---- 76 (450)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG----
T ss_pred EEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH----
Confidence 5666765 67777776543 3579999999998887765510 0 000123443 23433311
Q ss_pred CCCCceEEEEcC-cc----------cHHHHHHHHccccccCeEEEEEE
Q 022962 189 FREQYDVAVARA-VA----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 189 ~~~~fD~V~sn~-~~----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
...|+|+..- .. ....+++.+.+.|++|-.++...
T Consensus 77 --~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 --PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp --GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred --hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 2468888652 22 46788888888888876665544
No 453
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=87.50 E-value=0.8 Score=41.14 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=52.3
Q ss_pred CCCeEEEEcC--CCChHHHHHHHHCCCCEEE-EEeCChHHHHHHHHHHHHcCCCCEEEEecc---ccccCCCCcCCCCce
Q 022962 121 SNLKLVDVGT--GAGLPGLVLAIACPDWKVT-LLESMNKRCVFLEHAVSLTQLLNVQIVRGR---AETLGKDVSFREQYD 194 (289)
Q Consensus 121 ~~~~VLDiGc--G~G~~~l~la~~~p~~~V~-~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d---~~~~~~~~~~~~~fD 194 (289)
++.+||=+|+ |.|..++.+|+.. +++++ .++.++..- ...+.++++|.+.+ +..+ .+++.........+|
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~-~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~~~~~D 242 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQ-KLSDRLKSLGAEHV--ITEEELRRPEMKNFFKDMPQPR 242 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHH-HHHHHHHHTTCSEE--EEHHHHHSGGGGGTTSSSCCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchH-HHHHHHHhcCCcEE--EecCcchHHHHHHHHhCCCCce
Confidence 5889999997 4566677777765 45554 555544211 11233456776432 2211 112211000001489
Q ss_pred EEEEcCcccHHHHHHHHccccccCeEEEEE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+|+-..-.. .+ ..+.++|+++|+++..
T Consensus 243 vvid~~g~~--~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 243 LALNCVGGK--SS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp EEEESSCHH--HH-HHHHTTSCTTCEEEEC
T ss_pred EEEECCCcH--HH-HHHHHhhCCCCEEEEE
Confidence 988553221 22 3467899999999865
No 454
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=87.48 E-value=4.3 Score=35.71 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=25.3
Q ss_pred CCceEEEEcCc-----------cc----HHHHHHHHccccccCeEEEEE
Q 022962 191 EQYDVAVARAV-----------AE----MRILAEYCLPLVRVGGLFVAA 224 (289)
Q Consensus 191 ~~fD~V~sn~~-----------~~----~~~ll~~~~~~LkpgG~l~~~ 224 (289)
+++|+|+|+.- .+ +.-+++.+..+|+|||.|++-
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 57999999821 11 223677899999999999863
No 455
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=87.43 E-value=1.7 Score=37.29 Aligned_cols=77 Identities=14% Similarity=0.046 Sum_probs=51.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC------------hHHHHHHHHHHHHcCCCCEEEEeccccccCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM------------NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV 187 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s------------~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~ 187 (289)
+.++|=.|+++| +|..+|+.+ .+++|+.+|.+ .+.++...+..+..+. ++.++..|+.+...-.
T Consensus 10 ~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 10 GKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKDRAALE 87 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHH
Confidence 678999997655 577777653 46899999987 5555555555555553 6889999987642110
Q ss_pred c-C------CCCceEEEEcC
Q 022962 188 S-F------REQYDVAVARA 200 (289)
Q Consensus 188 ~-~------~~~fD~V~sn~ 200 (289)
. . -+..|+++.|+
T Consensus 88 ~~~~~~~~~~g~id~lv~nA 107 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNA 107 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHhcCCCCEEEECC
Confidence 0 0 13689999884
No 456
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=87.28 E-value=2.9 Score=36.91 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=66.5
Q ss_pred CeEEEEcCCCChHHHHHH---HHCCCCEEEE-EeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 123 LKLVDVGTGAGLPGLVLA---IACPDWKVTL-LESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la---~~~p~~~V~~-iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
.+|.=||||. +|..++ ...++.++++ +|.+++. +++.++..+. . ..|.+++... ...|+|+.
T Consensus 4 ~~vgiiG~G~--~g~~~~~~l~~~~~~~l~av~d~~~~~---~~~~~~~~~~---~--~~~~~~~l~~----~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGR--IGKVHAKAVSGNADARLVAVADAFPAA---AEAIAGAYGC---E--VRTIDAIEAA----ADIDAVVI 69 (331)
T ss_dssp EEEEEECCSH--HHHHHHHHHHHCTTEEEEEEECSSHHH---HHHHHHHTTC---E--ECCHHHHHHC----TTCCEEEE
T ss_pred eEEEEECCCH--HHHHHHHHHhhCCCcEEEEEECCCHHH---HHHHHHHhCC---C--cCCHHHHhcC----CCCCEEEE
Confidence 3677789864 343333 2357888885 7998876 3444455553 3 4566665331 35899886
Q ss_pred cC-cccHHHHHHHHccccccCeEEEEEEc-CCcHHHHHHHHHHHHHhCCeEe
Q 022962 199 RA-VAEMRILAEYCLPLVRVGGLFVAAKG-HDPQEEVKNSERAVQLMGASLL 248 (289)
Q Consensus 199 n~-~~~~~~ll~~~~~~LkpgG~l~~~~g-~~~~~ei~~~~~~l~~~g~~~~ 248 (289)
.. ......++. .+|+.|-.++++++ ....++..++.+..++.|..+.
T Consensus 70 ~tp~~~h~~~~~---~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 118 (331)
T 4hkt_A 70 CTPTDTHADLIE---RFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLM 118 (331)
T ss_dssp CSCGGGHHHHHH---HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred eCCchhHHHHHH---HHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 53 222333333 35666777777776 3556777777777778876544
No 457
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=87.20 E-value=1.2 Score=37.37 Aligned_cols=102 Identities=11% Similarity=0.065 Sum_probs=65.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc--------C-
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS--------F- 189 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~--------~- 189 (289)
+.++|=.|+++| +|..+++.+ .+.+|+.+ +.+.+..+.........+. ++.++..|+.+...... +
T Consensus 7 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 7 GKVALVTGASRG-IGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 678888888766 577776653 46788875 5666665555555555443 58888888876431100 0
Q ss_pred ----CCCceEEEEcCc------------c-----------cHHHHHHHHccccccCeEEEEEE
Q 022962 190 ----REQYDVAVARAV------------A-----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 190 ----~~~fD~V~sn~~------------~-----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..+.|+++.|+- . ..-.+++.+.+.++++|++++..
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~is 147 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINIS 147 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeC
Confidence 024899999840 0 12345667778888899988764
No 458
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=87.16 E-value=1.4 Score=37.84 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=51.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeC-------------ChHHHHHHHHHHHHcCCCCEEEEeccccccCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLES-------------MNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD 186 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~-------------s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~ 186 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|. +.+.++.+.+..+..+. ++.++..|+.+...-
T Consensus 11 ~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 11 GRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDRL 88 (277)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 678998997766 577766543 4789999998 56666655555555543 688899998764311
Q ss_pred Cc-C------CCCceEEEEcC
Q 022962 187 VS-F------REQYDVAVARA 200 (289)
Q Consensus 187 ~~-~------~~~fD~V~sn~ 200 (289)
.. . -+..|+++.|+
T Consensus 89 ~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 00 0 13689999984
No 459
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.16 E-value=2 Score=35.65 Aligned_cols=68 Identities=18% Similarity=0.191 Sum_probs=47.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCE-EEEecccc-ccCCCCcCCCCceEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNV-QIVRGRAE-TLGKDVSFREQYDVAV 197 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni-~~~~~d~~-~~~~~~~~~~~fD~V~ 197 (289)
+.+||=.|+ +|.+|..+++.+ .+.+|++++.++..++.... .++ +++.+|+. ++.. .+ +..|+|+
T Consensus 21 ~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~--~~-~~~D~vi 89 (236)
T 3e8x_A 21 GMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLEEDFSH--AF-ASIDAVV 89 (236)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTTSCCGG--GG-TTCSEEE
T ss_pred CCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccHHHHHH--HH-cCCCEEE
Confidence 778998885 577788877653 46899999999876544332 157 88999986 2211 12 4689999
Q ss_pred EcC
Q 022962 198 ARA 200 (289)
Q Consensus 198 sn~ 200 (289)
.++
T Consensus 90 ~~a 92 (236)
T 3e8x_A 90 FAA 92 (236)
T ss_dssp ECC
T ss_pred ECC
Confidence 884
No 460
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=87.10 E-value=0.82 Score=39.50 Aligned_cols=74 Identities=18% Similarity=0.104 Sum_probs=49.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++| +|..+++.+ .+.+|+++|.+++.++.+.+ ..+ .++.++..|+.+...-.. . -+.
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 28 KKIAIVTGAGSG-VGRAVAVALAGAGYGVALAGRRLDALQETAA---EIG-DDALCVPTDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHT-SCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 667887787655 577776653 46899999999877654443 333 368888999876431100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 103 iD~lVnnA 110 (272)
T 4dyv_A 103 VDVLFNNA 110 (272)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 461
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.07 E-value=2.5 Score=37.67 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=57.9
Q ss_pred CeEEEEcCCCChHHHHHHHH--CCCCEEEEEeCChHHHHHHHHHHHH-------cCC-----------CCEEEEeccccc
Q 022962 123 LKLVDVGTGAGLPGLVLAIA--CPDWKVTLLESMNKRCVFLEHAVSL-------TQL-----------LNVQIVRGRAET 182 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~--~p~~~V~~iD~s~~~l~~a~~~~~~-------~~l-----------~ni~~~~~d~~~ 182 (289)
.+|-=||+| .+|..+|.. ..+.+|+++|.+++.++.+++.++. .|+ .++++. .|+.+
T Consensus 7 ~kI~vIGaG--~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSG--LVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred ceEEEEeeC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 467778775 444444432 2367999999999998888664321 231 134442 34433
Q ss_pred cCCCCcCCCCceEEEEcCccc---HHHHHHHHccccccCeEEEE
Q 022962 183 LGKDVSFREQYDVAVARAVAE---MRILAEYCLPLVRVGGLFVA 223 (289)
Q Consensus 183 ~~~~~~~~~~fD~V~sn~~~~---~~~ll~~~~~~LkpgG~l~~ 223 (289)
.- ...|+|+.....+ ...+++++...++|+-.++-
T Consensus 84 av------~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 84 AV------EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp HT------TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred HH------hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 21 3579999875443 35788888889988886653
No 462
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=86.99 E-value=1.9 Score=37.14 Aligned_cols=77 Identities=10% Similarity=0.016 Sum_probs=53.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.+||=.|++ |.+|..+++.+ .+.+|++++.++..++.+.+.....+..++.++.+|+.+...-.. . -+.
T Consensus 28 ~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 28 GKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 6789988865 55677777643 468999999999887776665555554468889999876421000 0 136
Q ss_pred ceEEEEc
Q 022962 193 YDVAVAR 199 (289)
Q Consensus 193 fD~V~sn 199 (289)
.|+++.|
T Consensus 107 iD~li~n 113 (286)
T 1xu9_A 107 LDMLILN 113 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8999987
No 463
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.97 E-value=1.1 Score=32.58 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=45.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CC-CEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PD-WKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~-~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
+.+|+=+|+ |.+|..++... .+ .+|+++|.+++.++.+. . .++.++..|+.+...-...-..+|+|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999988 77777766542 24 78999999987765544 1 2466777777653210001136899997
Q ss_pred cC
Q 022962 199 RA 200 (289)
Q Consensus 199 n~ 200 (289)
..
T Consensus 76 ~~ 77 (118)
T 3ic5_A 76 AA 77 (118)
T ss_dssp CS
T ss_pred CC
Confidence 75
No 464
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=86.92 E-value=2.6 Score=35.72 Aligned_cols=77 Identities=13% Similarity=-0.030 Sum_probs=52.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC----c----CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV----S----FRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~----~----~~~ 191 (289)
+.++|=.|++ |.+|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-. . .-+
T Consensus 5 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 5 GQVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5678888865 45677777653 468999999998877666555554442 5888899987642100 0 014
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 83 ~id~lvnnA 91 (260)
T 2qq5_A 83 RLDVLVNNA 91 (260)
T ss_dssp CCCEEEECC
T ss_pred CceEEEECC
Confidence 689999987
No 465
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=86.91 E-value=1.5 Score=37.86 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHH-HHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKR-CVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~-l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+++.+ .+.+|++++.+... .+.+.+.++..+. ++.++..|+.+...-.. + -+
T Consensus 29 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 29 GKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 678888887554 677777653 46899999988643 3433344444443 58888888875421000 0 13
Q ss_pred CceEEEEcCc------------cc-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV------------AE-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~------------~~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- .+ .-.+++.+.+.++.+|.+++..
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 6899998841 01 1234456666666788988764
No 466
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=86.79 E-value=1.5 Score=37.89 Aligned_cols=74 Identities=18% Similarity=0.069 Sum_probs=49.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+ ..+. ++.++..|+.+...-.. . -+.
T Consensus 29 gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAAT---KIGC-GAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHCS-SCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCC-cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 678888897766 466666543 46899999999877655443 3342 58888889876431100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 104 iD~lvnnA 111 (277)
T 3gvc_A 104 VDKLVANA 111 (277)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 467
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=86.77 E-value=1.3 Score=38.18 Aligned_cols=77 Identities=12% Similarity=-0.016 Sum_probs=52.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++ .+|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++.+|+.+...-.. + -+.
T Consensus 22 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 22 SEVALVTGATS-GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp SCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 67899889765 4677776543 468999999998877666555555443 58888899876421000 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 100 iD~lv~~A 107 (277)
T 2rhc_B 100 VDVLVNNA 107 (277)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 468
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=86.46 E-value=1.4 Score=37.80 Aligned_cols=102 Identities=12% Similarity=-0.007 Sum_probs=63.5
Q ss_pred CCeEEEEcCC-CChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CCC
Q 022962 122 NLKLVDVGTG-AGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FRE 191 (289)
Q Consensus 122 ~~~VLDiGcG-~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~~ 191 (289)
+.+||=.|++ +|.+|..+++.+ .+.+|+++|.+++.-+.+++..+..+ ++.++..|+.+...-.. .-+
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 6789999986 366788887653 46899999998752223333333333 46778888876421000 013
Q ss_pred CceEEEEcCc--------c--------c-----------HHHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV--------A--------E-----------MRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~--------~--------~-----------~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- . + .-.+.+.+.+.++++|+++...
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 6899998841 0 0 1234566677777789988765
No 469
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=86.22 E-value=1.7 Score=36.67 Aligned_cols=73 Identities=21% Similarity=0.205 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.+||=.|.++| +|..+++.+ .+.+|+++|.+++.++...+ .+.++.++.+|+.+...-.. . -+.
T Consensus 2 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 2 NRGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAK-----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hcccCCeEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 457888886655 677776653 46899999999876543322 23467788999876421100 0 036
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 76 id~lv~nA 83 (247)
T 3dii_A 76 IDVLVNNA 83 (247)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 470
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=86.18 E-value=1.7 Score=37.30 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeC-ChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLES-MNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~-s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.++. ++...+.+.+..+..+. ++.++..|+.+...-.. . -+
T Consensus 28 ~k~vlVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 28 DRIALVTGASRG-IGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 678888887655 577776543 4689999998 66666666665665553 68889999886431100 0 13
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 106 ~id~lv~nA 114 (269)
T 4dmm_A 106 RLDVLVNNA 114 (269)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999984
No 471
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.12 E-value=0.85 Score=38.86 Aligned_cols=77 Identities=13% Similarity=0.051 Sum_probs=54.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.++|=.|+++| +|..+++.+ .+.+|+.+|.+++.++.+.+..+..+. ++.++..|+.+...-.. . -+.
T Consensus 12 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 12 DAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 678888887766 566666543 368999999999888777776666653 68899999876431100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 90 id~lv~nA 97 (256)
T 3gaf_A 90 ITVLVNNA 97 (256)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 472
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.06 E-value=2.2 Score=37.84 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=61.0
Q ss_pred CeEEEEcCCCChHHHHHHHHC--CCC--EEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEEE
Q 022962 123 LKLVDVGTGAGLPGLVLAIAC--PDW--KVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVAV 197 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~--p~~--~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V~ 197 (289)
.+|.=||+ |.+|..+|... .+. +|+++|.+++.++.+. +.|... . ...+..+ .. ...|+|+
T Consensus 34 ~kI~IIG~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~----~~G~~~-~-~~~~~~~~~~------~~aDvVi 99 (314)
T 3ggo_A 34 QNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID-E-GTTSIAKVED------FSPDFVM 99 (314)
T ss_dssp SEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS-E-EESCTTGGGG------GCCSEEE
T ss_pred CEEEEEee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----HCCCcc-h-hcCCHHHHhh------ccCCEEE
Confidence 57888886 45665555432 234 8999999998776654 345321 1 2234433 21 3579988
Q ss_pred Ec-CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHH
Q 022962 198 AR-AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERA 239 (289)
Q Consensus 198 sn-~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~ 239 (289)
.. .......+++++...+++|..++- .+......+..+.+.
T Consensus 100 lavp~~~~~~vl~~l~~~l~~~~iv~d-~~Svk~~~~~~~~~~ 141 (314)
T 3ggo_A 100 LSSPVRTFREIAKKLSYILSEDATVTD-QGSVKGKLVYDLENI 141 (314)
T ss_dssp ECSCGGGHHHHHHHHHHHSCTTCEEEE-CCSCCTHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHhhccCCCcEEEE-CCCCcHHHHHHHHHh
Confidence 65 445567888888888988876653 333333334444443
No 473
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=86.04 E-value=1.9 Score=36.66 Aligned_cols=102 Identities=10% Similarity=0.044 Sum_probs=61.6
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------cCCC
Q 022962 122 NLKLVDVGTGA-GLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-------SFRE 191 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-------~~~~ 191 (289)
+.+||=.|+++ |.+|..+++.+ .+++|+++|.++...+.+++.....+ +..++..|+.+...-. ..-+
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 66888889762 66788877653 46899999998732223333333333 3467788887642100 0013
Q ss_pred CceEEEEcCc--------ccH--------------------HHHHHHHccccccCeEEEEEE
Q 022962 192 QYDVAVARAV--------AEM--------------------RILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 192 ~fD~V~sn~~--------~~~--------------------~~ll~~~~~~LkpgG~l~~~~ 225 (289)
..|+++.|+- ..+ -.+++.+.+.++++|+++...
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 6899998851 111 124556677777788888765
No 474
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=86.03 E-value=1.4 Score=37.54 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=52.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++| +|..+++.+ .+.+|+.+ +.+++.++.+.+..+..+. ++.++.+|+.+...-.. + -+
T Consensus 4 ~k~vlVTGas~g-IG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 4 NKCALVTGSSRG-VGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 667888886655 677777653 46788886 8888877766666665553 68899999876431100 0 13
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 82 ~id~lv~nA 90 (258)
T 3oid_A 82 RLDVFVNNA 90 (258)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 679999984
No 475
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=85.96 E-value=4.1 Score=33.27 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=55.9
Q ss_pred eEEEEcCCCChHHHHHHHH---CCCCEEEEEeCChH-HHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 124 KLVDVGTGAGLPGLVLAIA---CPDWKVTLLESMNK-RCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~---~p~~~V~~iD~s~~-~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
+||=.|. +|.+|..+++. ..+.+|++++.+++ .++... .. ..++.++.+|+.+...-...-+.+|+|+.+
T Consensus 7 ~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 7 YITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID-HERVTVIEGSFQNPGXLEQAVTNAEVVFVG 80 (221)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT-STTEEEEECCTTCHHHHHHHHTTCSEEEES
T ss_pred EEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC-CCceEEEECCCCCHHHHHHHHcCCCEEEEc
Confidence 5888884 56678777654 25689999999986 443322 11 236899999997643110111368999988
Q ss_pred Ccc-cHHHHHHHHcccccc--CeEEEEEE
Q 022962 200 AVA-EMRILAEYCLPLVRV--GGLFVAAK 225 (289)
Q Consensus 200 ~~~-~~~~ll~~~~~~Lkp--gG~l~~~~ 225 (289)
+-. +.. .+.+.+.++. .|++++..
T Consensus 81 ag~~n~~--~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 81 AMESGSD--MASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp CCCCHHH--HHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCChh--HHHHHHHHHhcCCCeEEEEe
Confidence 632 332 3333333332 35777654
No 476
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.77 E-value=0.76 Score=39.68 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+.+|.+++.++.+.+..+..+. ++.++..|+.+...-.. .-+.
T Consensus 26 gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 26 GRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 678888886555 677777653 468999999999888777776666553 68888899876431100 0136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 104 iD~lv~nA 111 (271)
T 4ibo_A 104 VDILVNNA 111 (271)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999984
No 477
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=85.69 E-value=1.4 Score=37.30 Aligned_cols=77 Identities=13% Similarity=-0.015 Sum_probs=51.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-cC------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-SF------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-~~------~~~ 192 (289)
+.++|=.|++ |.+|..+++.+ .+.+|+++|.+++.++.+.+..+..+. ++.++..|+.+...-. .+ -+.
T Consensus 14 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 14 NKVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6788888865 45677777643 468999999998877665555555443 5888888887542100 00 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 92 iD~lv~~A 99 (260)
T 2zat_A 92 VDILVSNA 99 (260)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 478
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=85.65 E-value=0.78 Score=38.56 Aligned_cols=77 Identities=14% Similarity=0.001 Sum_probs=50.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCC-hHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-CC------C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESM-NKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-FR------E 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s-~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~~------~ 191 (289)
+.+||=.|+ +|.+|..+++.+ .+.+|+++|.+ +..++.+.+..+..+ .++.++.+|+.+...-.. +. +
T Consensus 7 ~k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 7 GKRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 568887776 466787777653 46799999998 666555555444444 368889999876431100 00 2
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+|+.|+
T Consensus 85 ~id~vi~~A 93 (258)
T 3afn_B 85 GIDVLINNA 93 (258)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 479
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=85.62 E-value=6.3 Score=33.00 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCE-EEEEeCChHHHHHHHHHHHHcCCCCEEEEecccccc-CCCC-cC------C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWK-VTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETL-GKDV-SF------R 190 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~-V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~-~~~~-~~------~ 190 (289)
+.+||=.|+ +|.+|..+++.+ .+.+ |+++|.++.. +.+++..+...-.++.++..|+.+. ..-. .. -
T Consensus 5 ~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 5 NKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 668888886 567788887654 3454 9999988632 2222222222223588888998764 2100 00 0
Q ss_pred CCceEEEEcC
Q 022962 191 EQYDVAVARA 200 (289)
Q Consensus 191 ~~fD~V~sn~ 200 (289)
+..|+++.|+
T Consensus 83 g~id~lv~~A 92 (254)
T 1sby_A 83 KTVDILINGA 92 (254)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3689999885
No 480
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=85.59 E-value=3.4 Score=35.97 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=36.2
Q ss_pred CCceEEEEcC---------------cccHHHHHHHHccccccCeEEEEEEcCCcHHHHHH-HHHHHHHhCCeEeEEe
Q 022962 191 EQYDVAVARA---------------VAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKN-SERAVQLMGASLLQLC 251 (289)
Q Consensus 191 ~~fD~V~sn~---------------~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~-~~~~l~~~g~~~~~~~ 251 (289)
+.||+|+.|. -..+.-+-..+.+.|+|||.+++ ++....+...+ +..++ ...|.-.+++
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~-~aYGyADR~SE~vV~al-ARkF~~~rv~ 284 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLI-RAYGYADRTSERVICVL-GRKFRSSRAL 284 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEE-EECCCCSHHHHHHHHHH-HTTEEEEEEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEE-EeecccccchHHHHHHH-Hhhheeeeee
Confidence 6899999993 11345666789999999999986 44333332222 22222 3456555554
No 481
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=85.32 E-value=1.3 Score=38.41 Aligned_cols=102 Identities=13% Similarity=0.134 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChH-------HHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C--
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNK-------RCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F-- 189 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~-------~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~-- 189 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.++. .++.+.+..+..+. ++.++..|+.+...-.. +
T Consensus 9 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 9 GKTMFISGGSRG-IGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHH
Confidence 678998998766 577776653 4689999999875 33344444444443 68899999876431100 0
Q ss_pred ----CCCceEEEEcCc------------cc-----------HHHHHHHHccccc--cCeEEEEEE
Q 022962 190 ----REQYDVAVARAV------------AE-----------MRILAEYCLPLVR--VGGLFVAAK 225 (289)
Q Consensus 190 ----~~~fD~V~sn~~------------~~-----------~~~ll~~~~~~Lk--pgG~l~~~~ 225 (289)
-+..|+++.|+- .+ .-.+.+.+.+.++ .+|.++...
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~is 151 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLS 151 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 137899999841 11 1235566666665 357877654
No 482
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=85.26 E-value=4.4 Score=38.10 Aligned_cols=116 Identities=9% Similarity=0.019 Sum_probs=70.4
Q ss_pred CCeEEEEcCCC--ChHHHHHH---HHC-CCCEEE-EEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCce
Q 022962 122 NLKLVDVGTGA--GLPGLVLA---IAC-PDWKVT-LLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYD 194 (289)
Q Consensus 122 ~~~VLDiGcG~--G~~~l~la---~~~-p~~~V~-~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD 194 (289)
..+|.=||||. |..+...+ ... ++.+++ .+|.+++. +++.++.++...+.+ ..|++++... ...|
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~---a~~~a~~~g~~~~~~-~~d~~ell~~----~~vD 110 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKS---SLQTIEQLQLKHATG-FDSLESFAQY----KDID 110 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHH---HHHHHHHTTCTTCEE-ESCHHHHHHC----TTCS
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHH---HHHHHHHcCCCccee-eCCHHHHhcC----CCCC
Confidence 35899999975 66664333 234 677876 46888765 444555666643333 4566665331 4589
Q ss_pred EEEEcCcccHHHHHHHHccccccC------eEEEEEEcC-CcHHHHHHHHHHHHHhC-CeE
Q 022962 195 VAVARAVAEMRILAEYCLPLVRVG------GLFVAAKGH-DPQEEVKNSERAVQLMG-ASL 247 (289)
Q Consensus 195 ~V~sn~~~~~~~ll~~~~~~Lkpg------G~l~~~~g~-~~~~ei~~~~~~l~~~g-~~~ 247 (289)
+|+....... -.+.+..+|+.| -.++++++. ...++..++.+..++.| ..+
T Consensus 111 ~V~I~tp~~~--H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 169 (479)
T 2nvw_A 111 MIVVSVKVPE--HYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQT 169 (479)
T ss_dssp EEEECSCHHH--HHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEE
T ss_pred EEEEcCCcHH--HHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 9986643221 122233456666 567888853 45677777777777888 654
No 483
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.22 E-value=0.68 Score=43.44 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=28.7
Q ss_pred CeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHH
Q 022962 123 LKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEH 163 (289)
Q Consensus 123 ~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~ 163 (289)
.+|-=||+ |+.|+.+|..+ .+.+|+|+|++++.++..+.
T Consensus 22 ~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~ 62 (444)
T 3vtf_A 22 ASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLRA 62 (444)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT
T ss_pred CEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHC
Confidence 46766755 67777776543 36799999999999887653
No 484
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=85.17 E-value=8.8 Score=34.36 Aligned_cols=115 Identities=17% Similarity=0.125 Sum_probs=67.9
Q ss_pred CCeEEEEcCCCChH-HHHHHHHCCCCEEEE-EeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLP-GLVLAIACPDWKVTL-LESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~-~l~la~~~p~~~V~~-iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
..+|.=||||.... ...-+...++.++++ +|.+++. +++.++..+... ...|++++... ...|+|+..
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~---a~~~a~~~~~~~---~~~~~~~ll~~----~~vD~V~I~ 95 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDAL---AAEFSAVYADAR---RIATAEEILED----ENIGLIVSA 95 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHHHSSSCC---EESCHHHHHTC----TTCCEEEEC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHH---HHHHHHHcCCCc---ccCCHHHHhcC----CCCCEEEEe
Confidence 35899999997653 222222247888765 5888765 445555665322 34677776432 458999864
Q ss_pred CcccHHHHHHHHccccccCeEEEEEEcC-CcHHHHHHHHHHHHHhCCeEe
Q 022962 200 AVAEMRILAEYCLPLVRVGGLFVAAKGH-DPQEEVKNSERAVQLMGASLL 248 (289)
Q Consensus 200 ~~~~~~~ll~~~~~~LkpgG~l~~~~g~-~~~~ei~~~~~~l~~~g~~~~ 248 (289)
..... =.+.+..+|+-|=.++++++. ...++..++.+..++.|..+.
T Consensus 96 tp~~~--H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~ 143 (361)
T 3u3x_A 96 AVSSE--RAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFS 143 (361)
T ss_dssp CCHHH--HHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEE
T ss_pred CChHH--HHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 32211 122333456667677777763 456667777777777776543
No 485
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.15 E-value=2.4 Score=34.42 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=56.5
Q ss_pred eEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 124 KLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+||=.|+ +|.+|..+++.+ .+.+|++++.++..+... . .+++++.+|+.+... ..+ ..+|+|+.++-
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~~~~~~D~~d~~~-~~~-~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H-KDINILQKDIFDLTL-SDL-SDQNVVVDAYG 70 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C-SSSEEEECCGGGCCH-HHH-TTCSEEEECCC
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c-CCCeEEeccccChhh-hhh-cCCCEEEECCc
Confidence 4665664 677888877653 468999999998654322 1 468899999987643 112 46899998852
Q ss_pred c----------cHHHHHHHHccccccCeEEEEEE
Q 022962 202 A----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 202 ~----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
. ....+++.+.+. ..+++++..
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~--~~~~~v~~S 102 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGT--VSPRLLVVG 102 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSC--CSSEEEEEC
T ss_pred CCccccchHHHHHHHHHHHHHhc--CCceEEEEe
Confidence 1 124555555443 246776653
No 486
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=85.14 E-value=2 Score=37.01 Aligned_cols=77 Identities=8% Similarity=-0.079 Sum_probs=48.5
Q ss_pred CCeEEEEcCCC-ChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGA-GLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.|+++ |.+|..+++.+ .+.+|+++|.+++.-+.+++..+..+ ++.++.+|+.+...-.. + -+
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899889863 66788777653 46899999998753223333333333 36778888876421000 0 13
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 99 ~iD~lv~~A 107 (285)
T 2p91_A 99 SLDIIVHSI 107 (285)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 487
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.09 E-value=3.4 Score=37.38 Aligned_cols=115 Identities=10% Similarity=0.116 Sum_probs=71.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVAR 199 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn 199 (289)
..+|.=||+ |.+|..+|... .+.+|+++|.+++.++.+.+ .+. .+ ..+..++... ....|+|+..
T Consensus 22 ~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~---~~-~~s~~e~~~~---a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI---AG-ARSIEEFCAK---LVKPRVVWLM 88 (358)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC---BC-CSSHHHHHHH---SCSSCEEEEC
T ss_pred CCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC---EE-eCCHHHHHhc---CCCCCEEEEe
Confidence 467888876 56676666532 35799999999987665543 232 21 2233333211 1345999875
Q ss_pred -CcccHHHHHHHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeEE
Q 022962 200 -AVAEMRILAEYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQL 250 (289)
Q Consensus 200 -~~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~~ 250 (289)
.....+.+++.+...|++|..++ ..+.........+.+.+...|...+..
T Consensus 89 vp~~~v~~vl~~l~~~l~~g~iiI-d~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 89 VPAAVVDSMLQRMTPLLAANDIVI-DGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp SCGGGHHHHHHHHGGGCCTTCEEE-ECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEE-eCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 33367788888888898877655 344444444455566677778876665
No 488
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.97 E-value=1.7 Score=36.86 Aligned_cols=77 Identities=17% Similarity=0.039 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHc-CCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLT-QLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~-~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.++|=.|+++ .+|..+++.+ .+.+|+++|.+++.++.+.+..+.. +. ++.++.+|+.+...-.. + -+
T Consensus 7 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAVITGSSS-GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67888888765 4677777643 4689999999987766554444433 43 68888999876421000 0 03
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 85 ~id~lv~~A 93 (263)
T 3ai3_A 85 GADILVNNA 93 (263)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 489
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.79 E-value=1.1 Score=40.62 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=56.7
Q ss_pred CCCeEEEEcCC--CChHHHHHHHHCCCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCC--CcCCCCceEE
Q 022962 121 SNLKLVDVGTG--AGLPGLVLAIACPDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKD--VSFREQYDVA 196 (289)
Q Consensus 121 ~~~~VLDiGcG--~G~~~l~la~~~p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~--~~~~~~fD~V 196 (289)
++.+||=+|++ .|..++.+|+.. +++|+++. +++.++.++ ++|.+. ++..+-.++... ...++.+|+|
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~----~lGa~~--vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAK----SRGAEE--VFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHH----HTTCSE--EEETTSTTHHHHHHHHTTTCCCEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHH----HcCCcE--EEECCCchHHHHHHHHccCCccEE
Confidence 58899999984 577777788775 56999986 777766554 467542 222211111100 0012459999
Q ss_pred EEcCcccHHHHHHHHcccc-ccCeEEEEE
Q 022962 197 VARAVAEMRILAEYCLPLV-RVGGLFVAA 224 (289)
Q Consensus 197 ~sn~~~~~~~ll~~~~~~L-kpgG~l~~~ 224 (289)
+-..-. ...++.+.+.| +++|+++..
T Consensus 236 ~d~~g~--~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 236 LDCITN--VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EESSCS--HHHHHHHHHHSCTTCEEEEES
T ss_pred EECCCc--hHHHHHHHHHhhcCCCEEEEE
Confidence 855322 23455566677 689998763
No 490
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=84.71 E-value=2.2 Score=36.76 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------REQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~~ 192 (289)
+.+||=.|++ |.+|..+++.+ .+.+|++++.++..++.+.+..+..+. ++.++.+|+.+...-.. + -+.
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5688888865 55688887654 457999999888776655555554443 58888899876421100 0 136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+|+.|+
T Consensus 122 id~li~~A 129 (285)
T 2c07_A 122 VDILVNNA 129 (285)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 491
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=84.70 E-value=2.6 Score=35.96 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=51.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-C------CC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-F------RE 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-~------~~ 191 (289)
+.+||=.|+++| +|..+|+.+ .+.+|+.+ +.+.+..+...+..+..+. ++.++..|+.+...-.. . -+
T Consensus 26 ~k~vlITGas~g-IG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 26 TPVVLVTGGSRG-IGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG-EAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp SCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 567888886554 677777653 46788776 7777777766666665543 68899999876431100 0 03
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+++.|+
T Consensus 104 ~id~li~nA 112 (272)
T 4e3z_A 104 RLDGLVNNA 112 (272)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 492
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=84.67 E-value=1.2 Score=37.41 Aligned_cols=77 Identities=18% Similarity=0.086 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHH-HHcCCCCEEEEeccccccCCCC-cCC------C
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAV-SLTQLLNVQIVRGRAETLGKDV-SFR------E 191 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~-~~~~l~ni~~~~~d~~~~~~~~-~~~------~ 191 (289)
+.++|=.|++ |.+|..+++.+ .+.+|+++|.++..++.+.+.. +..+ .++.++.+|+.+...-. .+. +
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4578888864 56787777643 4679999999987765544433 2222 25888999987643110 000 2
Q ss_pred CceEEEEcC
Q 022962 192 QYDVAVARA 200 (289)
Q Consensus 192 ~fD~V~sn~ 200 (289)
..|+|+.|+
T Consensus 80 ~id~li~~A 88 (250)
T 2cfc_A 80 AIDVLVNNA 88 (250)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 689999884
No 493
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=84.64 E-value=6.7 Score=36.72 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChH---HHHHHHHHHHHc--------CCCCEEEEeccccccCCCCc
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNK---RCVFLEHAVSLT--------QLLNVQIVRGRAETLGKDVS 188 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~---~l~~a~~~~~~~--------~l~ni~~~~~d~~~~~~~~~ 188 (289)
..+||=.| |+|.+|..++... .+.+|++++.++. ......+..+.. ...+++++.+|+.+.+.-.
T Consensus 150 ~~~VLVTG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 150 LGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CEEEEESC-TTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCeEEEEC-CccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 45788777 5799999988775 3478999998776 333333322221 1247999999998743221
Q ss_pred CCCCceEEEEcCc----------------ccHHHHHHHHccccccCeEEEEEE
Q 022962 189 FREQYDVAVARAV----------------AEMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 189 ~~~~fD~V~sn~~----------------~~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
....+|+|+.++- .....+++.+.+ .++.+++..
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iS 277 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVS 277 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT---TTCEEEEEE
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeC
Confidence 2357999997641 123455665554 456666654
No 494
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=84.64 E-value=2.4 Score=37.70 Aligned_cols=113 Identities=12% Similarity=-0.008 Sum_probs=64.4
Q ss_pred CCeEEEEcCCC-ChH-HHHHHHHCCCCEEEE-EeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEE
Q 022962 122 NLKLVDVGTGA-GLP-GLVLAIACPDWKVTL-LESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVA 198 (289)
Q Consensus 122 ~~~VLDiGcG~-G~~-~l~la~~~p~~~V~~-iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~s 198 (289)
-.+|-=||||. |.. -+......|+.+|+| +|.+++. +++.+++++..+ ...|++++-.. ...|+|+.
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~---a~~~a~~~g~~~---~y~d~~ell~~----~~iDaV~I 92 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTR---AREMADRFSVPH---AFGSYEEMLAS----DVIDAVYI 92 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHH---HHHHHHHHTCSE---EESSHHHHHHC----SSCSEEEE
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHH---HHHHHHHcCCCe---eeCCHHHHhcC----CCCCEEEE
Confidence 34788899974 321 123334568889886 5888765 556666777542 34677776432 46899986
Q ss_pred cC-cccHHHHHHHHccccccCeEEEEEEcC-CcHHHHHHHHHHHHHhCCeE
Q 022962 199 RA-VAEMRILAEYCLPLVRVGGLFVAAKGH-DPQEEVKNSERAVQLMGASL 247 (289)
Q Consensus 199 n~-~~~~~~ll~~~~~~LkpgG~l~~~~g~-~~~~ei~~~~~~l~~~g~~~ 247 (289)
.. ......+.. .+|+-|=.++++++. ...++..++.+..++.|..+
T Consensus 93 ~tP~~~H~~~~~---~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l 140 (350)
T 4had_A 93 PLPTSQHIEWSI---KAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVV 140 (350)
T ss_dssp CSCGGGHHHHHH---HHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCE
T ss_pred eCCCchhHHHHH---HHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCce
Confidence 53 222233332 234455566676653 23444455555555655543
No 495
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=84.44 E-value=0.73 Score=37.95 Aligned_cols=90 Identities=16% Similarity=0.054 Sum_probs=56.0
Q ss_pred eEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccc-cCCCCcCCCCceEEEEcC
Q 022962 124 KLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAET-LGKDVSFREQYDVAVARA 200 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~-~~~~~~~~~~fD~V~sn~ 200 (289)
+||=.| |+|.+|..+++.+ .+.+|++++.++..+. .+.+++++.+|+.+ ...-...-+.+|+|+.++
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVP---------QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---------CCTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchh---------hcCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 566667 4688898888764 3579999999875322 12479999999987 321111114689999884
Q ss_pred cc-----------cHHHHHHHHccccccCeEEEEEE
Q 022962 201 VA-----------EMRILAEYCLPLVRVGGLFVAAK 225 (289)
Q Consensus 201 ~~-----------~~~~ll~~~~~~LkpgG~l~~~~ 225 (289)
-. ....+++.+.+. ..+++++..
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~S 105 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKA--EVKRFILLS 105 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHh--CCCEEEEEC
Confidence 21 134555555321 225777654
No 496
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.37 E-value=1.7 Score=37.60 Aligned_cols=109 Identities=17% Similarity=0.122 Sum_probs=66.3
Q ss_pred eEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEEEEcCc
Q 022962 124 KLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVAVARAV 201 (289)
Q Consensus 124 ~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V~sn~~ 201 (289)
+|.=||+ |.+|..+|... .+.+|+++|.+++.++.+.+ .+ +.+ ..+..+.. ...|+|+..-.
T Consensus 3 ~i~iIG~--G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g---~~~-~~~~~~~~------~~aDvvi~~vp 66 (287)
T 3pef_A 3 KFGFIGL--GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA----LG---AER-AATPCEVV------ESCPVTFAMLA 66 (287)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----TT---CEE-CSSHHHHH------HHCSEEEECCS
T ss_pred EEEEEee--cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----CC---Cee-cCCHHHHH------hcCCEEEEEcC
Confidence 5666766 56776666542 35799999999987665544 23 322 23333321 23698887633
Q ss_pred --ccHHHHH---HHHccccccCeEEEEEEcCCcHHHHHHHHHHHHHhCCeEeE
Q 022962 202 --AEMRILA---EYCLPLVRVGGLFVAAKGHDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 202 --~~~~~ll---~~~~~~LkpgG~l~~~~g~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
...+.++ +.+...+++|..++- .+.........+.+.+...|...+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~-~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVD-MSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEe-CCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 3456666 666677888776654 3444445555666667777876554
No 497
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.34 E-value=3.9 Score=34.10 Aligned_cols=77 Identities=12% Similarity=-0.010 Sum_probs=54.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------cCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-------SFREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-------~~~~~ 192 (289)
+.++|=.|++ |.+|..+++.+ .+.+|++++.++..++.+.+..+..+. ++.++..|+.+...-. ...+.
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6688888865 45677776543 468999999999888877777766654 6889999987642110 01136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 83 id~li~~A 90 (247)
T 3lyl_A 83 IDILVNNA 90 (247)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 498
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=84.31 E-value=1 Score=38.96 Aligned_cols=76 Identities=13% Similarity=0.099 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCC-------cCCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDV-------SFREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~-------~~~~~ 192 (289)
+.+||=.|+++ .+|..+++.+ .+.+|+++|.+++.++...+.....+ ++.++..|+.+...-. ..-+.
T Consensus 29 ~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 29 GRIALVTGGSR-GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 67889888754 5677777653 46899999999877665544443333 6888888887642100 00136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 106 iD~lvnnA 113 (276)
T 2b4q_A 106 LDILVNNA 113 (276)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999884
No 499
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.30 E-value=4.5 Score=34.33 Aligned_cols=77 Identities=19% Similarity=0.135 Sum_probs=55.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHC--CCCEEEEEeCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCc-------CCCC
Q 022962 122 NLKLVDVGTGAGLPGLVLAIAC--PDWKVTLLESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVS-------FREQ 192 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l~la~~~--p~~~V~~iD~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~-------~~~~ 192 (289)
+.++|=.|+++| +|..+|+.+ .+.+|+++|.+++.++.+.+.....+. ++.++..|+.+...-.. .-+.
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 678999998777 466666543 478999999999888877776666653 68899999886431100 0136
Q ss_pred ceEEEEcC
Q 022962 193 YDVAVARA 200 (289)
Q Consensus 193 fD~V~sn~ 200 (289)
.|+++.|+
T Consensus 89 id~lv~nA 96 (264)
T 3ucx_A 89 VDVVINNA 96 (264)
T ss_dssp CSEEEECC
T ss_pred CcEEEECC
Confidence 89999885
No 500
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=84.26 E-value=6.9 Score=34.88 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=69.6
Q ss_pred CCeEEEEcCCCChHHH----HHHHHCCCCEEEEE-eCChHHHHHHHHHHHHcCCCCEEEEeccccccCCCCcCCCCceEE
Q 022962 122 NLKLVDVGTGAGLPGL----VLAIACPDWKVTLL-ESMNKRCVFLEHAVSLTQLLNVQIVRGRAETLGKDVSFREQYDVA 196 (289)
Q Consensus 122 ~~~VLDiGcG~G~~~l----~la~~~p~~~V~~i-D~s~~~l~~a~~~~~~~~l~ni~~~~~d~~~~~~~~~~~~~fD~V 196 (289)
..+|.=||||. +|. ......++.+++++ |.+++. +++.++..+. ... .|++++... ...|+|
T Consensus 27 ~~rigiIG~G~--~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~~a~~~g~---~~~-~~~~~ll~~----~~~D~V 93 (350)
T 3rc1_A 27 PIRVGVIGCAD--IAWRRALPALEAEPLTEVTAIASRRWDR---AKRFTERFGG---EPV-EGYPALLER----DDVDAV 93 (350)
T ss_dssp CEEEEEESCCH--HHHHTHHHHHHHCTTEEEEEEEESSHHH---HHHHHHHHCS---EEE-ESHHHHHTC----TTCSEE
T ss_pred ceEEEEEcCcH--HHHHHHHHHHHhCCCeEEEEEEcCCHHH---HHHHHHHcCC---CCc-CCHHHHhcC----CCCCEE
Confidence 35788899873 333 22234577888755 988765 4444555554 333 677776432 468998
Q ss_pred EEcC-cccHHHHHHHHccccccCeEEEEEEc-CCcHHHHHHHHHHHHHhCCeEeE
Q 022962 197 VARA-VAEMRILAEYCLPLVRVGGLFVAAKG-HDPQEEVKNSERAVQLMGASLLQ 249 (289)
Q Consensus 197 ~sn~-~~~~~~ll~~~~~~LkpgG~l~~~~g-~~~~~ei~~~~~~l~~~g~~~~~ 249 (289)
+... ......++ ..+|+.|-.++++++ ....++..++.+..++.|..+..
T Consensus 94 ~i~tp~~~h~~~~---~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 145 (350)
T 3rc1_A 94 YVPLPAVLHAEWI---DRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLME 145 (350)
T ss_dssp EECCCGGGHHHHH---HHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCCcHHHHHHH---HHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 8653 22233333 345667777888886 35677778888888888876543
Done!