BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022963
(289 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JHB5|TSNAX_RAT Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1
SV=1
Length = 290
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 141/235 (60%), Gaps = 27/235 (11%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRI-SRDNKEEVLKKAEADLEAV 114
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF +HRI S + EE+L ++E+ L+ V
Sbjct: 38 AFKSFQQELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTESESKLDGV 97
Query: 115 KDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLDLEELNAGLLPLS 174
+ Q + ++ +EL G D + RA + G+QEYVEA +F F RT +L+ +EE+N L +
Sbjct: 98 R-QKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIRTRSLISMEEINRQLTFTT 156
Query: 175 DPAIEP-----------------LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEK 217
D + + L+I DYLLG+ADLTGELMR+ I + +G+++ +
Sbjct: 157 DDSGKESKAPPADGQDKQLVTWRLKITPVDYLLGVADLTGELMRMCINSVGNGDIDTPFE 216
Query: 218 ICRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 269
+ +F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 217 VSQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLSKVENACYALKVRGSE 266
>sp|Q4R599|TSNAX_MACFA Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2
SV=1
Length = 290
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 141/235 (60%), Gaps = 27/235 (11%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRI-SRDNKEEVLKKAEADLEAV 114
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF +HRI S + E++L ++E L+ V
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGV 97
Query: 115 KDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLDLEELNAGLL--- 171
+ Q I ++ +EL G D + RA + G+QEYVEA +F F +T +L+ ++E+N L+
Sbjct: 98 R-QKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTT 156
Query: 172 ---------PLSDPAIEP-----LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEK 217
P SD E L++ DYLLG+ADLTGELMR+ I + +G+++ +
Sbjct: 157 DDNGKENKTPSSDTQDEQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFE 216
Query: 218 ICRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 269
+ +F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 217 VSQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|Q9QZE7|TSNAX_MOUSE Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1
Length = 290
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 141/235 (60%), Gaps = 27/235 (11%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRI-SRDNKEEVLKKAEADLEAV 114
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF +HRI S + EE+L ++E+ L+ V
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTESESKLDGV 97
Query: 115 KDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLDLEELNAGLLPLS 174
+ Q I ++ +EL G D + RA + G+QEYVEA +F F +T +L+ +EE+N L +
Sbjct: 98 R-QKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQLTFTA 156
Query: 175 D--------PAIEP---------LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEK 217
+ P E L++ DYLLG+ADLTGELMR+ I + +G+++ +
Sbjct: 157 EDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFE 216
Query: 218 ICRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 269
+ +F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 217 VSQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|Q5RC21|TSNAX_PONAB Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1
Length = 290
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 141/235 (60%), Gaps = 27/235 (11%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRI-SRDNKEEVLKKAEADLEAV 114
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF +HRI S + E++L ++E L+ V
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGV 97
Query: 115 KDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLDLEELNAGLL--- 171
+ Q I ++ +EL G D + RA + G+QEYVEA +F F +T +L+ ++E+N L+
Sbjct: 98 R-QKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTT 156
Query: 172 ---------PLSDPAIEP-----LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEK 217
P SD + L++ DYLLG+ADLTGELMR+ I + +G+++ +
Sbjct: 157 EDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFE 216
Query: 218 ICRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 269
+ +F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 217 VSQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|Q99598|TSNAX_HUMAN Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1
Length = 290
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 141/235 (60%), Gaps = 27/235 (11%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRI-SRDNKEEVLKKAEADLEAV 114
AF ++ L+ ++K ER+VK SRDIT+ SK+ IF +HRI S + E++L ++E L+ V
Sbjct: 38 AFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGV 97
Query: 115 KDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLDLEELNAGLL--- 171
+ Q I ++ +EL G D + RA + G+QEYVEA +F F +T +L+ ++E+N L+
Sbjct: 98 R-QKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTT 156
Query: 172 ---------PLSDPAIEP-----LQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEK 217
P SD + L++ DYLLG+ADLTGELMR+ I + +G+++ +
Sbjct: 157 EDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFE 216
Query: 218 ICRFSRDIYRELTLVVPLMDNNS---DMKTKMDTMLQSVLKIENACLSVHVRGSE 269
+ +F R +Y + + N+ ++ K+ T+ QS+ K+ENAC ++ VRGSE
Sbjct: 217 VSQFLRQVYDGFSFI-----GNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSE 266
>sp|O74955|TSNAX_SCHPO Translin-associated protein X homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC736.09c PE=3 SV=1
Length = 231
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 30/225 (13%)
Query: 53 MKDAFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRISR----------DNKEE 102
M++ F ++ +L E +KRE++++ SR+ITI SK++IF +H+ S D
Sbjct: 1 MEEEFLSFKNFLQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFDRTSI 60
Query: 103 VLKKAEADLEAVKDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLD 162
KK +LE++K +EL G + K A + G+QEYVEA TF + +TGTLL
Sbjct: 61 FEKKIHKELESLK--------RELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLS 112
Query: 163 LEELNAGLLPLSDPAIEPLQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKICRFS 222
+ D + + IN DY+LG+ D+TGE+MR + S ++ + +F
Sbjct: 113 CK----------DSSFR-ISINFIDYVLGVCDMTGEIMRFLVTNGSKFSVQQLTQQVKFL 161
Query: 223 RDIYRELTLVVPLMDN-NSDMKTKMDTMLQSVLKIENACLSVHVR 266
R +++ + + L S+++ K+ M S+ K+E C S +R
Sbjct: 162 RGLHKNCSEIEHLPSKVKSELQQKLSVMENSISKVEGICYSKILR 206
>sp|P79769|TSN_CHICK Translin OS=Gallus gallus GN=TSN PE=1 SV=1
Length = 229
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 105 KKAEADLEAVKDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKFCRTGTLLDLE 164
+KA V+ Q + L + +++ + +Q V A+F + T TL+ E
Sbjct: 59 QKAREHFGTVRTQ-MESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTRE 117
Query: 165 ELNAGLLPLSDPAIEPLQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEKICRFSRD 224
+ A +L + +++ DYL G+ L EL RLA+ ++ G+ +I F +
Sbjct: 118 AV-AEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINE 176
Query: 225 I---YRELTLVVPLMDNNSDMKTKMDTMLQSVLKIENACLSVHVRG 267
+ +R L L N ++ + D + V KIE + +RG
Sbjct: 177 LDSGFRLLNL------KNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
>sp|Q57639|Y175_METJA Uncharacterized protein MJ0175 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0175 PE=4 SV=1
Length = 222
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
Query: 45 RTITTESYMK------DAFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRISRD 98
+ I T Y+K D YL + RE ++K SR+IT + +I ++H+ D
Sbjct: 3 KQILTIGYIKFLVVAMDELNYLINYLANKDSVREEILKLSREITRDCAMLIRKIHK--SD 60
Query: 99 NKEEVLKKAEADLEAVKDQYISRLVKELQG-TDFWKLRRAYSPGVQEYVEAATFCKFCRT 157
+K+E K IS +K+L F + S QE+VEA +
Sbjct: 61 DKDEFKDKLNE---------ISEKIKKLNSLATFPEFVGYLSTPQQEFVEALSLYMIKFD 111
Query: 158 GTLLDLEELNAGLLPLSDPAIEPLQINVFDYLLGLADLTGELMRLAIGRISDGELEFAEK 217
+ +EL+ I +Y+LGLAD+ GEL R + + + L E+
Sbjct: 112 NKIPSFKELDF--------------IKEENYILGLADVIGELRREVLEAMKNDNLAEVER 157
Query: 218 ICRFSRDIY 226
+F D+Y
Sbjct: 158 YFKFMEDLY 166
>sp|O31046|LEU1_STRCO 2-isopropylmalate synthase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=leuA PE=3 SV=2
Length = 573
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 207 ISDGELEFAEKICRFSRDIY-----RELTLVVPLMDNNSDMKTKMDT---MLQSVLKIEN 258
+D EL+FA ++C D Y RE+ L +P S T D M +++ + E+
Sbjct: 188 FTDTELDFALEVCEAVMDTYQPGPGREIILNLPATVERSTPSTHADRFEWMGRNLSRREH 247
Query: 259 ACLSVHVRGSEYTLLGSSDPSFLMG 283
CLSVH T + +++ + + G
Sbjct: 248 VCLSVHPHNDRGTAVAAAELALMAG 272
>sp|Q82BV3|LEU1_STRAW 2-isopropylmalate synthase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=leuA PE=3 SV=1
Length = 573
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 207 ISDGELEFAEKICRFSRDIY-----RELTLVVPLMDNNSDMKTKMDT---MLQSVLKIEN 258
+D EL+FA ++C D++ RE+ L +P S T D M +++ + E
Sbjct: 188 FTDTELDFALEVCEAVMDVWQPGPDREIILNLPATVERSTPSTHADRFEWMSRNLSRREY 247
Query: 259 ACLSVHVRGSEYTLLGSSDPSFLMG 283
CLSVH T + +++ + + G
Sbjct: 248 VCLSVHPHNDRGTAVAAAELALMAG 272
>sp|Q00704|OE66_NPVAC Occlusion-derived virus envelope protein E66 OS=Autographa
californica nuclear polyhedrosis virus GN=P79 PE=3 SV=2
Length = 704
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 65 NELNEKRERVVKSSRDITINSKKVIFQVHRISRDNKEE 102
N LN RV+ SRD ++N+ + F+ RI+ +N E
Sbjct: 510 NSLNNTNGRVIVLSRDTSVNTNDLSFEAQRINNNNSSE 547
>sp|Q47RM9|LEU1_THEFY 2-isopropylmalate synthase OS=Thermobifida fusca (strain YX)
GN=leuA PE=3 SV=1
Length = 568
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 209 DGELEFAEKICRFSRDIY-----RELTLVVPLMDNNSDMKTKMDT---MLQSVLKIENAC 260
D ELEFA ++C D+Y RE+ L +P + D M +++ + E C
Sbjct: 189 DTELEFALEVCEAVMDVYQPGPDREIILNLPATVERATPNVYADQIEWMSRNLSRREYVC 248
Query: 261 LSVHVRGSEYTLLGSSDPSFLMG 283
LSVH T + +++ + + G
Sbjct: 249 LSVHPHNDRGTAVAAAELAVMAG 271
>sp|A9VGD4|EX7L_BACWK Exodeoxyribonuclease 7 large subunit OS=Bacillus weihenstephanensis
(strain KBAB4) GN=xseA PE=3 SV=1
Length = 452
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 71 RERVVKSSRDITINSKKVIFQVHRISRDNKEEVLKKAEADLEAVKDQYISRLVKELQGTD 130
RERV K + + K F+ R + KEE L +A L K++YI + V +L+
Sbjct: 284 RERVHKKEEKLQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLS 343
Query: 131 FW 132
F+
Sbjct: 344 FY 345
>sp|O10305|OE66_NPVOP Occlusion-derived virus envelope protein E66 OS=Orgyia
pseudotsugata multicapsid polyhedrosis virus GN=ORF50
PE=3 SV=1
Length = 682
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 65 NELNEKRERVVKSSRDITINSKKVIFQVHRISRDNKEE 102
N LN RVV SRD ++N+ + F+ R++ +N +
Sbjct: 487 NSLNNVNGRVVVLSRDTSVNTNDLSFEAQRLNNNNSSD 524
>sp|Q9VL84|PPK11_DROME Pickpocket protein 11 OS=Drosophila melanogaster GN=ppk11 PE=2 SV=2
Length = 516
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 23/142 (16%)
Query: 45 RTITTESYMKDAFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQV-----HRISRDN 99
R + +Y K F++Y G V++S+ +I +SK F+V H I
Sbjct: 229 RLCCSFNYNKQLFSSYLGV--------SFVLRSNDEILQSSKSAGFEVLIHESHEIPNGA 280
Query: 100 KEEVLKKAEADLEAVKDQYISRLVKELQGTDFWKLRRAYSPGVQEYVEAATFCKF----- 154
V E+D + YI+R K L+G K R Y + + + + +
Sbjct: 281 TPRVFVPGESDAHIMLRPYINRFTKNLKGLSLQK-RGCYFSTERRLILSDVYNQINCLAE 339
Query: 155 CRTGTLLDLEELNAGLLPLSDP 176
CRT ++L + G +P P
Sbjct: 340 CRTESILK----SCGCIPPKSP 357
>sp|A5VZT5|SYP_PSEP1 Proline--tRNA ligase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=proS PE=3 SV=1
Length = 571
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 27 HRLHQLSGTALQSIAKRPRTITTESYMKDAFANYAGYLNELNEKRERVVKSS 78
H L+++ T L+ +A P + TE+ ++DA AG L LN E ++ S
Sbjct: 300 HELNEIKATKLEQVAD-PLVMATEAELRDAIGAGAGSLGPLNLPLEIIIDRS 350
>sp|Q88NK2|SYP_PSEPK Proline--tRNA ligase OS=Pseudomonas putida (strain KT2440) GN=proS
PE=3 SV=1
Length = 571
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 27 HRLHQLSGTALQSIAKRPRTITTESYMKDAFANYAGYLNELNEKRERVVKSS 78
H L+++ T L+ +A P + TE+ ++DA AG L LN E ++ S
Sbjct: 300 HELNEIKATKLEQVAD-PLVMATEAELRDAIGAGAGSLGPLNLPLEIIIDRS 350
>sp|P41556|RPOA1_METVS DNA-directed RNA polymerase subunit A' OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=rpoA1 PE=3 SV=1
Length = 889
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 180 PLQINVFDYLLGLADLTGELMRLAIGRISD-----GELEFAEKICR--FSRDIYRELTLV 232
P+ + D LG+ D G + + GR+ G +E ++ + F++DIY+ L V
Sbjct: 43 PIDGGLMDTRLGVID-PGLVCKSCSGRVGTCPGHFGHIELSKSVIHIGFAKDIYKLLKAV 101
Query: 233 VPLMDNNSDMKTKMDTMLQSVLKIE 257
P + + K D L+ +LK+E
Sbjct: 102 CPHCGKVTVTEIKRDEYLEKMLKLE 126
>sp|B6EWW8|V5NTD_GLOBR Snake venom 5'-nucleotidase OS=Gloydius brevicaudus PE=2 SV=1
Length = 588
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRISRDNKEEVLKKAEADLEAVK 115
AF Y GYLN + + + V+KSS + + +K + +D K EV K + L
Sbjct: 296 AFGKYLGYLNVIFDDKGNVIKSSGNPILLNKNI-----SEDQDVKAEV-NKMKIQLHNYS 349
Query: 116 DQYISRLVKELQGT 129
Q I + + L GT
Sbjct: 350 SQEIGKTIVYLNGT 363
>sp|Q59677|MUTB_PORGI Methylmalonyl-CoA mutase large subunit OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=mutB PE=3 SV=1
Length = 715
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 86 KKVIFQVHRISRDNKEEVLKKAEADLEAVKDQYISRLVKELQGTDFWKLRRAYSPGVQEY 145
++VI V++ R KE+ + E D AV+ Q I RL D R VQE
Sbjct: 456 QQVIVGVNKY-RLPKEDPIDILEIDNTAVRKQQIERL------NDLRSHRD--EKAVQEA 506
Query: 146 VEAATFCKFCRTGTLLDLEELNAGL 170
+EA T C + G LLDL AGL
Sbjct: 507 LEAITKCVETKEGNLLDLAVKAAGL 531
>sp|F8S0Z7|V5NTD_CROAD Snake venom 5'-nucleotidase (Fragment) OS=Crotalus adamanteus PE=2
SV=1
Length = 526
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 56 AFANYAGYLNELNEKRERVVKSSRDITINSKKVIFQVHRISRDNKEEVLKKAEADLEAVK 115
AF Y GYLN + + + V+KSS + + +K + +D K EV K + L
Sbjct: 234 AFGKYLGYLNVIFDDKGNVIKSSGNPILLNKDI-----SEDQDIKAEV-NKMKIQLHNYS 287
Query: 116 DQYISRLVKELQGT 129
Q I + + L GT
Sbjct: 288 SQEIGKTIVYLNGT 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,271,725
Number of Sequences: 539616
Number of extensions: 3855123
Number of successful extensions: 12211
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 12159
Number of HSP's gapped (non-prelim): 63
length of query: 289
length of database: 191,569,459
effective HSP length: 116
effective length of query: 173
effective length of database: 128,974,003
effective search space: 22312502519
effective search space used: 22312502519
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)