Your job contains 1 sequence.
>022964
MTSLINSGPRSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVDQ
VQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSY
NSLKADYDNLFKEKEKLKAEVLKLTDKLQVKEKESKNTELPVVNKQEPPQISEPVADSAA
SEGKVCKASVVACKQEDISSAKSDIFDSDSPNYTDGVHSSLLETCDSSYVFEPEQSDLSQ
DEDDSLSKNVLLPPYVFPKLEETEYSDPPTNSCNFGFPIEDHAFWSWSF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022964
(289 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 405 3.6e-40 2
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 343 3.3e-31 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 331 6.2e-30 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 329 1.0e-29 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 325 2.7e-29 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 312 6.4e-28 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 309 1.3e-27 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 291 1.1e-25 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 271 1.4e-23 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 260 2.1e-22 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 238 4.4e-20 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 234 1.2e-19 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 231 2.5e-19 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 206 5.0e-19 2
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 227 6.5e-19 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 215 1.2e-17 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 201 7.0e-16 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 188 3.7e-14 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 178 2.4e-12 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 178 2.5e-12 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 177 3.8e-12 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 174 8.8e-12 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 172 1.5e-11 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 172 3.0e-11 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 155 4.2e-11 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 170 5.8e-11 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 134 1.1e-08 1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein... 127 6.9e-08 1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac... 127 6.9e-08 1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein... 126 9.0e-08 1
UNIPROTKB|O14627 - symbol:CDX4 "Homeobox protein CDX-4" s... 142 1.2e-07 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 124 1.5e-07 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 124 1.5e-07 1
UNIPROTKB|G3V397 - symbol:BARX2 "Homeobox protein BarH-li... 103 1.8e-07 2
MGI|MGI:97352 - symbol:Nkx3-1 "NK-3 transcription factor,... 138 1.9e-07 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 123 1.9e-07 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 122 2.5e-07 1
UNIPROTKB|F8VWZ5 - symbol:HLX "H2.0-like homeobox protein... 122 2.5e-07 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 121 3.2e-07 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 120 4.2e-07 1
UNIPROTKB|E1C639 - symbol:Gga.30007 "Uncharacterized prot... 119 5.4e-07 1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 135 7.6e-07 1
UNIPROTKB|F1PS13 - symbol:CDX4 "Uncharacterized protein" ... 135 8.7e-07 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 117 9.1e-07 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 117 9.1e-07 1
RGD|1305369 - symbol:Nkx3-1 "NK3 homeobox 1" species:1011... 132 1.1e-06 1
FB|FBgn0011278 - symbol:lbe "ladybird early" species:7227... 138 1.1e-06 1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 116 1.2e-06 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 116 1.2e-06 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 116 1.2e-06 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 116 1.2e-06 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 116 1.2e-06 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 133 1.3e-06 1
MGI|MGI:96086 - symbol:Hhex "hematopoietically expressed ... 133 1.3e-06 1
UNIPROTKB|K7GKV4 - symbol:LOC100623433 "Uncharacterized p... 133 1.5e-06 1
UNIPROTKB|E1BAV6 - symbol:LOC519648 "Uncharacterized prot... 133 1.5e-06 1
UNIPROTKB|I3L5H5 - symbol:LOC100623433 "Uncharacterized p... 133 1.5e-06 1
UNIPROTKB|F1P169 - symbol:DBX2 "Homeobox protein DBX2" sp... 115 1.5e-06 1
UNIPROTKB|Q91975 - symbol:DBX2 "Homeobox protein DBX2" sp... 115 1.5e-06 1
RGD|1561529 - symbol:Cdx4 "caudal type homeo box 4" speci... 133 1.5e-06 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 114 2.0e-06 1
UNIPROTKB|F1NZJ4 - symbol:HOXD8 "Homeobox protein Hox-D8"... 120 2.1e-06 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 131 2.2e-06 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 131 2.3e-06 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 129 2.4e-06 2
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 113 2.5e-06 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 113 2.5e-06 1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 128 2.9e-06 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 112 3.3e-06 1
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"... 112 3.3e-06 1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"... 112 3.3e-06 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 112 3.3e-06 1
MGI|MGI:88362 - symbol:Cdx4 "caudal type homeobox 4" spec... 130 3.3e-06 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 129 3.9e-06 1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 129 4.0e-06 1
ZFIN|ZDB-GENE-030328-42 - symbol:pnx "posterior neuron-sp... 122 4.0e-06 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 111 4.2e-06 1
UNIPROTKB|I3LRX4 - symbol:I3LRX4 "Uncharacterized protein... 111 4.2e-06 1
UNIPROTKB|P09078 - symbol:HOXB8 "Homeobox protein Hox-B8"... 111 4.2e-06 1
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R... 111 4.2e-06 1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"... 111 4.2e-06 1
RGD|2321880 - symbol:LOC100360577 "homeobox A4-like" spec... 123 4.3e-06 1
UNIPROTKB|E1B732 - symbol:NKX3-1 "Uncharacterized protein... 127 4.8e-06 1
UNIPROTKB|E1B8D8 - symbol:HOXA7 "Uncharacterized protein"... 122 5.1e-06 2
UNIPROTKB|F1NLW0 - symbol:LOC100858514 "Uncharacterized p... 122 5.3e-06 1
MGI|MGI:103219 - symbol:Meox2 "mesenchyme homeobox 2" spe... 129 5.3e-06 1
UNIPROTKB|F1NXJ0 - symbol:DBX2 "Homeobox protein DBX2" sp... 115 6.1e-06 1
UNIPROTKB|E1C143 - symbol:PITX3 "Uncharacterized protein"... 128 6.3e-06 1
ZFIN|ZDB-GENE-030131-4340 - symbol:nkx2.9 "NK2 transcript... 116 7.0e-06 1
UNIPROTKB|H2L2F8 - symbol:ceh-27 "Protein CEH-27, isoform... 118 7.1e-06 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 109 7.1e-06 1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 109 7.1e-06 1
UNIPROTKB|F6Y020 - symbol:NKX3-1 "Uncharacterized protein... 125 7.2e-06 1
UNIPROTKB|Q99801 - symbol:NKX3-1 "Homeobox protein Nkx-3.... 125 7.4e-06 1
ZFIN|ZDB-GENE-080204-54 - symbol:hmx1 "H6 homeo box 1" sp... 127 7.5e-06 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 133 7.8e-06 1
UNIPROTKB|F1NZL8 - symbol:LOC100857765 "Uncharacterized p... 111 8.5e-06 1
FB|FBgn0051481 - symbol:pb "proboscipedia" species:7227 "... 133 8.7e-06 1
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 133 9.0e-06 1
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ... 108 9.1e-06 1
WARNING: Descriptions of 448 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 405 (147.6 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 97/208 (46%), Positives = 128/208 (61%)
Query: 8 GPRSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKS 67
G RSM++ E+ S RPFF D D+ +D+ PEKKRRLT +QV LEKS
Sbjct: 32 GARSMMNMEET-----SKRRPFFSS-PEDLYDDDFYDDQL--PEKKRRLTTEQVHLLEKS 83
Query: 68 FEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADY 127
FE ENKLEPERK QLAK LGLQPRQVA+WFQNRRARWKTKQLE+DYD+L+++Y+ L ++Y
Sbjct: 84 FETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNY 143
Query: 128 DNLFXXXXXXXXXXXXXTDKLQVKEKESKNTELPVVNKQEPPQISEPVADSAAS---EGK 184
D++ T+KLQ K+ E+ N P EP Q+ +PV +AA+ E +
Sbjct: 144 DSIVMDNDKLRSEVTSLTEKLQGKQ-ETANE--PPGQVPEPNQL-DPVYINAAAIKTEDR 199
Query: 185 VCKASVVACKQEDISSAKSDIFDSDSPN 212
+ SV + +D + D DS P+
Sbjct: 200 LSSGSVGSAVLDDDAPQLLDSCDSYFPS 227
Score = 39 (18.8 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 269 PTNSCNFGFPIEDHAFWSW 287
PT S + E AFW W
Sbjct: 253 PTTSPSHDHHGESLAFWGW 271
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 73/159 (45%), Positives = 98/159 (61%)
Query: 23 GSNNRPFFRPFDRDENGDEDFDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERK 79
GSN + +D D E++ H EKKRRL VDQV+ LEK+FE+ENKLEPERK
Sbjct: 27 GSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERK 86
Query: 80 IQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXX 139
+LA++LGLQPRQVA+WFQNRRARWKTKQLEKDY VL+ Y+SL+ ++D+L
Sbjct: 87 TKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQ 146
Query: 140 XXXXXTDKLQVKEKESKNTELPVVNKQEPPQISEPVADS 178
K+ +E + N + K+E ++ + S
Sbjct: 147 EISKIKAKVNGEEDNNNNKAITEGVKEEEVHKTDSIPSS 185
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 74/186 (39%), Positives = 110/186 (59%)
Query: 4 LINSGPRSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVDQVQF 63
LI+ P + + G + ++ +E + + EKKRRL+++QV+
Sbjct: 14 LISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKA 73
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSL 123
LEK+FE+ENKLEPERK++LA++LGLQPRQVA+WFQNRRARWKTKQLEKDY VL+ Y+SL
Sbjct: 74 LEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSL 133
Query: 124 KADYDNLFXXXXXXXXXXXXXTDKLQV---KEKESKN-----TELPVVNKQEPPQISEPV 175
+ ++D+L KL +E+E +N TE + K+E + E +
Sbjct: 134 RHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKI 193
Query: 176 ADSAAS 181
++ +S
Sbjct: 194 TEAPSS 199
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 63/94 (67%), Positives = 79/94 (84%)
Query: 38 NGDEDF-DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIW 96
NG+ED+ D+ EKKRRL ++QV+ LEK+FE+ NKLEPERK+QLA+ LGLQPRQ+AIW
Sbjct: 70 NGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIW 129
Query: 97 FQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNL 130
FQNRRARWKTKQLEKDYD L+ +++LKA+ D L
Sbjct: 130 FQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLL 163
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/101 (64%), Positives = 82/101 (81%)
Query: 34 DRDENGDED--FDEYFHQP--EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQ 89
D+D+ G+ED D+ H EKK+RL ++QV+ LEKSFE+ NKLEPERK+QLAK LGLQ
Sbjct: 93 DQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQ 152
Query: 90 PRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNL 130
PRQ+AIWFQNRRARWKTKQLE+DYD L+ ++ LK+D D+L
Sbjct: 153 PRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSL 193
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 57/80 (71%), Positives = 75/80 (93%)
Query: 51 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
EKKRRL V+QV+ LEK+FE++NKLEPERK++LA++LGLQPRQVAIWFQNRRARWKTKQLE
Sbjct: 71 EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130
Query: 111 KDYDVLQNSYNSLKADYDNL 130
+DY VL++++++LK + D+L
Sbjct: 131 RDYGVLKSNFDALKRNRDSL 150
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Query: 19 HLANGSNNRPFFRPF-------DRDENGDED--FDEYFHQP--EKKRRLTVDQVQFLEKS 67
HL NG N R D ++ DE+ D+ H EKK+RL ++QV+ LEKS
Sbjct: 43 HLFNGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKS 102
Query: 68 FEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADY 127
FE+ NKLEPERKIQLAK LG+QPRQ+AIWFQNRRARWKT+QLE+DYD L+ + SLK+D
Sbjct: 103 FELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDN 162
Query: 128 DNL 130
+L
Sbjct: 163 ASL 165
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 57/96 (59%), Positives = 76/96 (79%)
Query: 36 DENGDEDF-DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVA 94
D NGDE++ D+ EKKRRL ++Q++ LEK FE+ NKLE +RK++LA+ LGLQPRQ+A
Sbjct: 54 DMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIA 113
Query: 95 IWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNL 130
IWFQNRRAR KTKQLEKDYD+L+ + SL+ + + L
Sbjct: 114 IWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVL 149
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 62/177 (35%), Positives = 103/177 (58%)
Query: 53 KRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 112
++R + +Q++ LE FE E +LEP +K+Q+A++LGLQPRQVAIWFQN+RARWKTKQLEK+
Sbjct: 31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKE 90
Query: 113 YDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNTELPVVNKQEPPQIS 172
Y+ L+ +YN+L + ++ + +++Q + KE K+ E +
Sbjct: 91 YNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQ-RPKEEKHHECCGDQGLALSSST 149
Query: 173 EPVADSAASEGKVCKASVVACKQEDISS-AKSDIFDSDSPNYTDGVHSSLLETCDSS 228
E + EG++ + SV+ C D ++ K++ F + TD +++E D S
Sbjct: 150 ESHNGKSEPEGRLDQGSVL-CNDGDYNNNIKTEYFGFEEE--TDHELMNIVEKADDS 203
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 44/83 (53%), Positives = 67/83 (80%)
Query: 48 HQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
H +RR + +Q++ LE FE E +LEP +K+QLA++LGLQPRQVAIWFQN+RARWK+K
Sbjct: 28 HNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSK 87
Query: 108 QLEKDYDVLQNSYNSLKADYDNL 130
QLE +Y++L+ +Y++L + +++L
Sbjct: 88 QLETEYNILRQNYDNLASQFESL 110
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 52 KKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
+KR+LT +QV LE SF E+KLE ERK +LA +LGL PRQVA+WFQNRRARWK K+LE+
Sbjct: 55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEE 114
Query: 112 DYDVLQNSYNSLKAD 126
+Y+ L+NS++++ D
Sbjct: 115 EYNKLKNSHDNVVVD 129
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 52/131 (39%), Positives = 80/131 (61%)
Query: 52 KKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
KK+RLT Q+ LE+SF+ E KL+ +RK++L+++LGLQPRQ+A+WFQNRRARWK KQLE+
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 112 DYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNTELPVVNKQEPPQI 171
YD L+ Y+ + + L D+ +K++ S T + V +++ +I
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLR---DQGLIKKQISAGT-IKVSGEEDTVEI 192
Query: 172 SEPVADSAASE 182
S V +E
Sbjct: 193 SSVVVAHPRTE 203
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 45/86 (52%), Positives = 65/86 (75%)
Query: 37 ENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIW 96
E G+ + + +F +KR+L+ +QV+ LE SFE ++KLE ERK +LA +LGL PRQVA+W
Sbjct: 50 EEGENEGNGWF----RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVW 105
Query: 97 FQNRRARWKTKQLEKDYDVLQNSYNS 122
FQNRRARWK K++E +Y L+N+Y +
Sbjct: 106 FQNRRARWKNKRVEDEYTKLKNAYET 131
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 206 (77.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Query: 52 KKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
KK+RLT DQV+ LEK F + KLEP+ K+QL+ LGL RQVA+WFQN+RAR+KT+ LE
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70
Query: 112 DYDVLQNSYNSLKAD 126
+ LQ+ + + +D
Sbjct: 71 QHCTLQSKHEAALSD 85
Score = 36 (17.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 267 DPPTNSCNFGFPIEDH 282
D P ++ N G EDH
Sbjct: 114 DSPVDNSNLGSCDEDH 129
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/108 (43%), Positives = 75/108 (69%)
Query: 32 PFDRDENG-DEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVE---N-----KLEPERKIQL 82
P E+G E+ + + Q +KK+++T +Q++FLE+SF+ E N KL P+RK++L
Sbjct: 50 PLAMVESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKL 109
Query: 83 AKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNL 130
+K+LGLQPRQ+A+WFQNR+ARWK KQLE Y+ L+ ++ + + + L
Sbjct: 110 SKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELL 157
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 41/72 (56%), Positives = 57/72 (79%)
Query: 52 KKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
+KR+LT +QV LE SF E+KLE RK ++A +LGL PRQVA+WFQNRRARWK K+LE+
Sbjct: 71 RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEE 130
Query: 112 DYDVLQNSYNSL 123
+Y L+N ++++
Sbjct: 131 EYAKLKNHHDNV 142
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 201 (75.8 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 47/102 (46%), Positives = 60/102 (58%)
Query: 24 SNNRPFFRPFDRDEN--GDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQ 81
SN R +R + +ED D+ KK RL+ DQ FLE SF+ + L P++KI
Sbjct: 160 SNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIA 219
Query: 82 LAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSL 123
LAK L L+PRQV +WFQNRRAR K KQ E D + L+ SL
Sbjct: 220 LAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESL 261
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 188 (71.2 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 37 ENGD-EDF--DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQV 93
E+GD E+F D+ P KK RLT +Q + LE SF + L P++K LAK L L+PRQ+
Sbjct: 121 EDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQI 180
Query: 94 AIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNL 130
+WFQNRRAR K KQ E + + L+ + SL + L
Sbjct: 181 EVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRL 217
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 178 (67.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 40/84 (47%), Positives = 50/84 (59%)
Query: 40 DEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQN 99
DE+ D KK RL+ DQ LE +F+ N L P++K+ LAK LGL RQV +WFQN
Sbjct: 123 DEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQN 182
Query: 100 RRARWKTKQLEKDYDVLQNSYNSL 123
RRAR K KQ E D + L+ L
Sbjct: 183 RRARTKLKQTEVDCEYLKRCVEKL 206
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 178 (67.7 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 41/90 (45%), Positives = 53/90 (58%)
Query: 34 DRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQV 93
D +E+G E KK RL+ DQ FLE++F+ N L P++K+ LAK L L RQV
Sbjct: 119 DEEEDGGET-------SRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQV 171
Query: 94 AIWFQNRRARWKTKQLEKDYDVLQNSYNSL 123
+WFQNRRAR K KQ E D + L+ L
Sbjct: 172 EVWFQNRRARTKLKQTEVDCEYLKRCVEKL 201
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 177 (67.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 31 RPFDRDENGDEDF--DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D D G DE KK RL+ DQ LE++F+ + L P++K LAK LGL
Sbjct: 106 REEDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGL 165
Query: 89 QPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSL 123
+ RQV +WFQNRRAR K KQ E D + L+ +L
Sbjct: 166 RARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENL 200
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 174 (66.3 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 40 DEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQN 99
D+ DE KK RLT Q LE +F++ + L P++K LA+ L L+PRQV +WFQN
Sbjct: 114 DDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQN 173
Query: 100 RRARWKTKQLEKDYDVLQNSYNSL 123
RRAR K KQ E D + L+ +L
Sbjct: 174 RRARTKLKQTEVDCEFLKKCCETL 197
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 172 (65.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 41/87 (47%), Positives = 54/87 (62%)
Query: 44 DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
DE KK RLT Q LE+SF+ + L P++K LA+ L L+PRQV +WFQNRRAR
Sbjct: 105 DEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRAR 164
Query: 104 WKTKQLEKDYDVLQNSYNSLKADYDNL 130
K KQ E D + L+ +L AD +N+
Sbjct: 165 TKLKQTEVDCEFLKKCCETL-AD-ENI 189
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 172 (65.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 36 DENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAI 95
DE+G + D+ KK RL+ +Q LE++F+ + L P++K+ LAK L L+ RQV +
Sbjct: 149 DEDGSGNGDD---SSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEV 205
Query: 96 WFQNRRARWKTKQLEKDYDVLQNSYNSL 123
WFQNRRAR K KQ E D + L+ +L
Sbjct: 206 WFQNRRARTKLKQTEVDCEYLKRCCENL 233
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 155 (59.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 40 DEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQN 99
+ED + KK RLT +Q LE+SF + L P++K LA L L RQV +WFQN
Sbjct: 57 NEDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQN 116
Query: 100 RRARWKTKQLEKDYDVLQNSYNSLK 124
RRAR K K E + + L+ + SLK
Sbjct: 117 RRARSKLKHTEMECEYLKRWFGSLK 141
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 170 (64.9 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 52 KKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
KK RL+ DQ LE++F+ + L P++K+ LAK L L+ RQV +WFQNRRAR K KQ E
Sbjct: 163 KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEV 222
Query: 112 DYDVLQNSYNSL 123
D + L+ ++L
Sbjct: 223 DCEYLKRCCDNL 234
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 50 PEKKR----RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
P+K++ R T +Q LE F+ L P+ + +LAK L L RQV WFQNRRA+W+
Sbjct: 73 PQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWR 132
Query: 106 TKQLE-KDYDVLQN 118
+ + +D D + N
Sbjct: 133 RVRKDGEDEDEMPN 146
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 127 (49.8 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 28 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 87
Query: 107 KQLEKDYDVLQNSYNSLKA 125
KQL D L+ ++SL A
Sbjct: 88 KQLTSDLGDLEK-HSSLPA 105
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 127 (49.8 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 28 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 87
Query: 107 KQLEKDYDVLQNSYNSLKA 125
KQL D L+ ++SL A
Sbjct: 88 KQLTSDLGDLEK-HSSLPA 105
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 126 (49.4 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 33/85 (38%), Positives = 43/85 (50%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 30 QPQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 89
Query: 107 KQLEKDYDVLQNSYNSLKADYDNLF 131
KQL D L+ +SL A + F
Sbjct: 90 KQLSSDLGNLEKP-SSLPALKEEAF 113
>UNIPROTKB|O14627 [details] [associations]
symbol:CDX4 "Homeobox protein CDX-4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0060711 "labyrinthine
layer development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001568
GO:GO:0000976 EMBL:CH471104 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:AF003530 EMBL:AF029879 EMBL:AF029877 EMBL:AF029878
EMBL:AL450108 EMBL:BC128233 IPI:IPI00023058 RefSeq:NP_005184.1
UniGene:Hs.553488 ProteinModelPortal:O14627 SMR:O14627
STRING:O14627 PhosphoSite:O14627 PRIDE:O14627
Ensembl:ENST00000373514 GeneID:1046 KEGG:hsa:1046 UCSC:uc011mqk.2
CTD:1046 GeneCards:GC0XP072583 HGNC:HGNC:1808 MIM:300025
neXtProt:NX_O14627 PharmGKB:PA26353 InParanoid:O14627 OMA:FQPIEIQ
PhylomeDB:O14627 GenomeRNAi:1046 NextBio:4385 Bgee:O14627
CleanEx:HS_CDX4 Genevestigator:O14627 GermOnline:ENSG00000131264
Uniprot:O14627
Length = 284
Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + +RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 174 EKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 232
Query: 110 EKDYDVLQNSYNSLKADYDNL 130
+K +NS S+++D D++
Sbjct: 233 KKKISQFENSGGSVQSDSDSI 253
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 31 RPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D ++ + ++ E +P K+R T +Q++ LE F N L R+ ++A +L L
Sbjct: 17 RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDL 76
Query: 89 QPRQVAIWFQNRRARWK 105
RQV +WFQNRR +WK
Sbjct: 77 TERQVKVWFQNRRMKWK 93
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/63 (46%), Positives = 36/63 (57%)
Query: 52 KKRRLTVD--QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
KK R T QV LEK FE + L + +LAK L + QV IWFQNRR +WK +
Sbjct: 71 KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIES 130
Query: 110 EKD 112
EK+
Sbjct: 131 EKE 133
>UNIPROTKB|G3V397 [details] [associations]
symbol:BARX2 "Homeobox protein BarH-like 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0042637 "catagen" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0001502 GO:GO:0000976 EMBL:AP003775 HGNC:HGNC:956
GO:GO:0042637 GO:GO:0014902 ProteinModelPortal:G3V397 SMR:G3V397
Ensembl:ENST00000526127 ArrayExpress:G3V397 Bgee:G3V397
Uniprot:G3V397
Length = 134
Score = 103 (41.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
LEK F+ + L ++ LA+ LGL QV W+QNRR +WK L+
Sbjct: 3 LEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 49
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 148 LQVKEKESKNTELPVVNKQEPP 169
L++ E ELP+ + + PP
Sbjct: 111 LEMAEPPDPPQELPIPSSEPPP 132
>MGI|MGI:97352 [details] [associations]
symbol:Nkx3-1 "NK-3 transcription factor, locus 1
(Drosophila)" species:10090 "Mus musculus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=TAS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0004882
"androgen receptor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007431 "salivary gland development" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=ISO;IDA;IPI] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;IGI] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0030284
"estrogen receptor activity" evidence=ISO] [GO:0030295 "protein
kinase activator activity" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0030850 "prostate gland
development" evidence=TAS] [GO:0033574 "response to testosterone
stimulus" evidence=IMP] [GO:0035260 "internal genitalia
morphogenesis" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0043569 "negative regulation of insulin-like
growth factor receptor signaling pathway" evidence=IDA] [GO:0043621
"protein self-association" evidence=ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045860 "positive
regulation of protein kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=ISO] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=IMP] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IMP]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071850 "mitotic cell cycle arrest" evidence=ISO]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=ISO] [GO:0097162 "MADS box domain binding" evidence=IDA]
[GO:2000836 "positive regulation of androgen secretion"
evidence=ISO] [GO:2001022 "positive regulation of response to DNA
damage stimulus" evidence=ISO] [GO:2001235 "positive regulation of
apoptotic signaling pathway" evidence=ISO] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97352 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0008134 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0030331
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:0045930 GO:GO:2001022 GO:GO:0060442
GO:GO:0071850 GO:GO:0000988 GO:GO:0030284 GO:GO:0060664
HOGENOM:HOG000231923 HOVERGEN:HBG006689 KO:K09348 GO:GO:0071899
CTD:4824 eggNOG:NOG238786 OMA:TEPERHL OrthoDB:EOG46Q6TS
GO:GO:0035907 GO:GO:2000836 EMBL:U73460 EMBL:U88542 IPI:IPI00125359
RefSeq:NP_035051.1 UniGene:Mm.3520 ProteinModelPortal:P97436
SMR:P97436 STRING:P97436 PhosphoSite:P97436 PRIDE:P97436
Ensembl:ENSMUST00000022646 GeneID:18095 KEGG:mmu:18095
InParanoid:P97436 NextBio:293247 Bgee:P97436 CleanEx:MM_NKX3-1
Genevestigator:P97436 GermOnline:ENSMUSG00000022061 GO:GO:0097162
GO:GO:0035260 Uniprot:P97436
Length = 237
Score = 138 (53.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/84 (42%), Positives = 46/84 (54%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 123 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 182
Query: 107 KQLEKDYDVLQ-NSYNSLKADYDN 129
KQL +D VL+ NS SL A D+
Sbjct: 183 KQLSEDLGVLEKNSPLSLPALKDD 206
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 123 (48.4 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 34 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 91
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 122 (48.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 9 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66
>UNIPROTKB|F8VWZ5 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
"positive regulation of organ growth" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
Uniprot:F8VWZ5
Length = 151
Score = 122 (48.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 64 LEKSFEVENKL-EPERKIQLAKDLGLQPRQVAIWFQNRRARW---KTKQLEKDYD 114
LEK FE++ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 24 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 77
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 23/65 (35%), Positives = 45/65 (69%)
Query: 49 QPEKKRRLTV--DQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
Q KK R DQ++ LEK F+ ++ + +++ ++A+ +G+ P+++ +WFQNRRA+W+
Sbjct: 59 QIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR- 117
Query: 107 KQLEK 111
++EK
Sbjct: 118 -KMEK 121
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 120 (47.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P ++R R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK
Sbjct: 53 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 111
Query: 107 KQLEKD 112
K+ KD
Sbjct: 112 KENNKD 117
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 119 (46.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 34 DRDENGDEDFDEYFHQPEK-KRRL----TVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
+ D+ D D H K KRR+ T +Q+Q LEK F+V + + + QLA + L
Sbjct: 62 EEDQLCDFPVDHPLHVERKGKRRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINL 121
Query: 89 QPRQVAIWFQNRRARWKTKQLEKDYDVLQN 118
+V IWFQN+RA+W+ + ++ LQ+
Sbjct: 122 PEARVQIWFQNQRAKWRKHEKFGNFGGLQH 151
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 135 (52.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 43 FDEYFHQPEKKR-----RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWF 97
++ + +P KR R + DQ LEK FE + L P + +LAK L L RQV WF
Sbjct: 127 WNPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWF 186
Query: 98 QNRRARWKTKQLEKDYDVLQNSYNSLKADYD 128
QNRRA+W+ + E ++ +SL D
Sbjct: 187 QNRRAKWRRLKQENPQSNKKDELDSLDTSCD 217
>UNIPROTKB|F1PS13 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:AAEX03026515 Ensembl:ENSCAFT00000027221 Uniprot:F1PS13
Length = 284
Score = 135 (52.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + +RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 174 EKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK-ERKTI 232
Query: 110 EKDYDVLQNSYNSLKAD 126
+K +NS +S+++D
Sbjct: 233 KKKISQFENSGSSVQSD 249
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 117 (46.2 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 26/55 (47%), Positives = 32/55 (58%)
Query: 60 QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
QV LEK F L R+I++A L L RQ+ IWFQNRR +WK KD+D
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHD 71
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 117 (46.2 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 26/55 (47%), Positives = 32/55 (58%)
Query: 60 QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
QV LEK F L R+I++A L L RQ+ IWFQNRR +WK KD+D
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHD 71
>RGD|1305369 [details] [associations]
symbol:Nkx3-1 "NK3 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO;ISS] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO;ISS] [GO:0001047 "core
promoter binding" evidence=ISO;ISS] [GO:0001656 "metanephros
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004882
"androgen receptor activity" evidence=ISO;ISS] [GO:0005622
"intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;ISS] [GO:0007431 "salivary gland development"
evidence=ISO;ISS] [GO:0007507 "heart development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;ISS] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=ISO;ISS] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO;ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO;ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISO;ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISO;ISS]
[GO:0030331 "estrogen receptor binding" evidence=ISO;ISS]
[GO:0030521 "androgen receptor signaling pathway" evidence=ISO;ISS]
[GO:0033574 "response to testosterone stimulus" evidence=ISO;ISS]
[GO:0035690 "cellular response to drug" evidence=IEA;ISO]
[GO:0035907 "dorsal aorta development" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO;ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISO;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0043569 "negative
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISO;ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA;ISO] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISO;ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO;ISS] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=ISO;ISS] [GO:0051781
"positive regulation of cell division" evidence=ISO;ISS]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0060442 "branching involved in prostate gland morphogenesis"
evidence=ISO;ISS] [GO:0060664 "epithelial cell proliferation
involved in salivary gland morphogenesis" evidence=ISO;ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISO;ISS]
[GO:0071347 "cellular response to interleukin-1" evidence=IEA;ISO]
[GO:0071356 "cellular response to tumor necrosis factor"
evidence=IEA;ISO] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISO;ISS] [GO:0071456 "cellular response to
hypoxia" evidence=IEA;ISO] [GO:0071850 "mitotic cell cycle arrest"
evidence=IEA;ISO] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=ISO;ISS] [GO:0097162 "MADS box domain
binding" evidence=IEA;ISO] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISO;ISS] [GO:2001022 "positive
regulation of response to DNA damage stimulus" evidence=ISO;ISS]
[GO:2001235 "positive regulation of apoptotic signaling pathway"
evidence=ISO] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=ISO;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1305369 GO:GO:0005634
GO:GO:0045892 GO:GO:0007507 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0071456 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
GO:GO:0006919 GO:GO:0035690 GO:GO:0010942 GO:GO:0060037
GO:GO:0033574 GO:GO:0001047 GO:GO:0008656 GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 EMBL:CH473951 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 CTD:4824 eggNOG:NOG238786 OMA:TEPERHL
OrthoDB:EOG46Q6TS GO:GO:0035907 GO:GO:2000836 EMBL:BC100628
IPI:IPI00373298 RefSeq:NP_001029316.1 UniGene:Rn.43468 SMR:Q497B7
STRING:Q497B7 Ensembl:ENSRNOT00000020753 GeneID:305999
KEGG:rno:305999 UCSC:RGD:1305369 InParanoid:Q497B7 NextBio:655374
Genevestigator:Q497B7 Uniprot:Q497B7
Length = 238
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 124 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 183
Query: 107 KQLEKDYDVLQ-NSYNSL 123
+QL +D VL+ NS SL
Sbjct: 184 RQLSEDLGVLEKNSTLSL 201
>FB|FBgn0011278 [details] [associations]
symbol:lbe "ladybird early" species:7227 "Drosophila
melanogaster" [GO:0007483 "genital disc morphogenesis"
evidence=IMP] [GO:0008544 "epidermis development" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS;IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007517 "muscle organ development"
evidence=IMP;TAS] [GO:0007507 "heart development" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007501 "mesodermal cell fate specification" evidence=TAS]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0051450 "myoblast
proliferation" evidence=IGI] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0016477 "cell migration"
evidence=IGI] [GO:0007520 "myoblast fusion" evidence=IGI]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0045664 GO:GO:0007507 GO:GO:0016477 GO:GO:0007417
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007501
GO:GO:0000122 GO:GO:0048813 GO:GO:0007520 GO:GO:0008544
GO:GO:0000976 GO:GO:0007480 GeneTree:ENSGT00700000104206
GO:GO:0042659 GO:GO:0007483 GO:GO:0051450 FlyBase:FBgn0011278
EMBL:BT126373 RefSeq:NP_524435.2 UniGene:Dm.2383 SMR:Q7KS77
STRING:Q7KS77 EnsemblMetazoa:FBtr0084091 GeneID:42542
KEGG:dme:Dmel_CG6545 UCSC:CG6545-RA CTD:42542 InParanoid:Q7KS77
OMA:SPAESEI GenomeRNAi:42542 NextBio:829333 Uniprot:Q7KS77
Length = 479
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/106 (35%), Positives = 61/106 (57%)
Query: 34 DRDENGDEDFDEYFH---QPEKKRR----LTVDQVQFLEKSFEVENKLEPERKIQLAKDL 86
D DE+ D+ + F QP+KKR+ T Q+ LEK F + L P + ++A L
Sbjct: 331 DFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASL 390
Query: 87 GLQPRQVAIWFQNRRARWKT--KQLEKDYDVLQNSYNSLKADYDNL 130
GL QV WFQNRRA+ K ++L+KD+D ++ +++ K+ +N+
Sbjct: 391 GLSNAQVITWFQNRRAKQKRDIEELKKDFDSVK-VFSAHKSFLENV 435
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 50 PEKKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
P ++ R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 6 PARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK 63
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 112
LEK F L +R+I+++ LGL RQV IWFQNRR +WK K+ KD
Sbjct: 10 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 57
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 112
LEK F L +R+I+++ LGL RQV IWFQNRR +WK K+ KD
Sbjct: 26 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 73
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 112
LEK F L +R+I+++ LGL RQV IWFQNRR +WK K+ KD
Sbjct: 30 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 112
LEK F L +R+I+++ LGL RQV IWFQNRR +WK K+ KD
Sbjct: 30 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202
Query: 115 VLQNSYNSLKADYD 128
+ SL + D
Sbjct: 203 NKKEELESLDSSCD 216
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 115 VLQNSYNSL 123
+++ +SL
Sbjct: 204 NKKDALDSL 212
>UNIPROTKB|K7GKV4 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:FP245529 RefSeq:XP_003360417.1
Ensembl:ENSSSCT00000034899 GeneID:100623433 Uniprot:K7GKV4
Length = 284
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 174 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 232
Query: 110 EKDYDVLQNSYNSLKAD 126
+K +NS S+++D
Sbjct: 233 KKKISQFENSGGSVQSD 249
>UNIPROTKB|E1BAV6 [details] [associations]
symbol:LOC519648 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:DAAA02072594 EMBL:DAAA02072595 IPI:IPI00696146
Ensembl:ENSBTAT00000002260 Uniprot:E1BAV6
Length = 285
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 175 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 233
Query: 110 EKDYDVLQNSYNSLKAD 126
+K +NS S+++D
Sbjct: 234 KKKISQFENSGGSVQSD 250
>UNIPROTKB|I3L5H5 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ EMBL:FP245529
Ensembl:ENSSSCT00000030959 Uniprot:I3L5H5
Length = 286
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 176 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 234
Query: 110 EKDYDVLQNSYNSLKAD 126
+K +NS S+++D
Sbjct: 235 KKKISQFENSGGSVQSD 251
>UNIPROTKB|F1P169 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
ArrayExpress:F1P169 Uniprot:F1P169
Length = 156
Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 59 DQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQN 118
DQ + LEK F+ + + + +LA +LGL+ QV IWFQNRR +W+ K+ +VL N
Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 75
>UNIPROTKB|Q91975 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
Uniprot:Q91975
Length = 157
Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 59 DQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQN 118
DQ + LEK F+ + + + +LA +LGL+ QV IWFQNRR +W+ K+ +VL N
Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 75
>RGD|1561529 [details] [associations]
symbol:Cdx4 "caudal type homeo box 4" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA;ISO] [GO:0001890 "placenta development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0060711 "labyrinthine layer development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1561529 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000122 GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 KO:K09312
OrthoDB:EOG42FSK7 CTD:1046 OMA:FQPIEIQ EMBL:CH473969
IPI:IPI00202224 RefSeq:NP_001100412.1 UniGene:Rn.218668
Ensembl:ENSRNOT00000003973 GeneID:302400 KEGG:rno:302400
UCSC:RGD:1561529 NextBio:649569 Uniprot:D3ZF67
Length = 288
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 178 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 236
Query: 110 EKDYDVLQNSYNSLKAD 126
+K +NS S+++D
Sbjct: 237 KKKISQFENSGGSVQSD 253
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 114 (45.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 34 DRDENGDEDFDEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQ 92
D EN + E + K+R T +Q++ LE F N L R+ ++A +L L RQ
Sbjct: 42 DNQENRGKP--EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQ 99
Query: 93 VAIWFQNRRARWK 105
V +WFQNRR +WK
Sbjct: 100 VKVWFQNRRMKWK 112
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 120 (47.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P ++R R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK
Sbjct: 73 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 131
Query: 107 KQLEKD 112
K+ KD
Sbjct: 132 KENNKD 137
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 131 (51.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E +
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 202
Query: 115 VLQNSYNSLKADYD 128
+ SL D
Sbjct: 203 NKKEELESLDNSCD 216
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 131 (51.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E +
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 204
Query: 115 VLQNSYNSLKADYD 128
+ SL D
Sbjct: 205 NKKEELESLDNSCD 218
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 129 (50.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 204
Query: 115 VLQNSYNSLK 124
++ SL+
Sbjct: 205 NKKDETESLE 214
Score = 36 (17.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 145 TDKLQVKEKESKNTELPVVNKQEPPQISEPVADSAASEGKVCKASVVACKQEDISSAK 202
T+ L+ +ES+ L K + EP + + E + S + ++ DI K
Sbjct: 210 TESLENICEESQERCLSAEQKSRESSLDEPTSSPTSQETLDSEVSDDSDQEVDIEGDK 267
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 113 (44.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 52 KKR-RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
KKR T Q LEK F L ER+++++K + L RQV IWFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 82
Query: 111 KDYDVLQNSYN 121
L +++N
Sbjct: 83 NRIRELTSNFN 93
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 113 (44.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 52 KKR-RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
KKR T Q LEK F L ER+++++K + L RQV IWFQNRR + K E
Sbjct: 27 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 86
Query: 111 KDYDVLQNSYN 121
L +++N
Sbjct: 87 NRIRELTSNFN 97
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 128 (50.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 178
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 112 (44.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 112 (44.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
K+ R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 68 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK---- 123
Query: 110 EKDYDVLQNSYNSLKADYDN 129
+++ S + KAD ++
Sbjct: 124 KENKTACSGSSSQEKADVED 143
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 112 (44.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 50 PEKKRRLTVD---QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
P+ KR T Q LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 5 PDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 112 (44.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 49 QPEKKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R + D Q++ LE+SF L + +LA+ LGL QV +WFQNRR + K
Sbjct: 34 RPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>MGI|MGI:88362 [details] [associations]
symbol:Cdx4 "caudal type homeobox 4" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0001890 "placenta development" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0060711 "labyrinthine layer development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:88362 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
CTD:1046 EMBL:L08061 IPI:IPI00116620 PIR:A56676 RefSeq:NP_031700.1
UniGene:Mm.4353 ProteinModelPortal:Q07424 SMR:Q07424 STRING:Q07424
PhosphoSite:Q07424 PRIDE:Q07424 Ensembl:ENSMUST00000033689
GeneID:12592 KEGG:mmu:12592 InParanoid:Q07424 NextBio:281742
Bgee:Q07424 CleanEx:MM_CDX4 Genevestigator:Q07424
GermOnline:ENSMUSG00000031326 Uniprot:Q07424
Length = 282
Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 172 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 230
Query: 110 EKDYDVLQNSYNSLKAD 126
+K +N+ S+++D
Sbjct: 231 KKKISQFENTGGSVQSD 247
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 129 (50.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 115 VLQNSYNSL 123
+ SL
Sbjct: 204 NKKEELESL 212
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 129 (50.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYD 114
R + DQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 202
Query: 115 VLQNSYNSLK 124
++ SL+
Sbjct: 203 NKKDETESLE 212
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 122 (48.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 57 TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
T+DQ++ LE+SF+ + L + +A LGL QV IWFQNRR +WK K+L+
Sbjct: 75 TLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWK-KELD 127
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 49 QPEKKRRL--TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
Q +K+R T Q++ LE+ F + E+++QL++ L L RQV IWFQNRR K
Sbjct: 35 QRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM--KE 92
Query: 107 KQLEKD 112
K+L +D
Sbjct: 93 KKLNRD 98
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 51 EKKRR---LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
E++RR T +Q+ LEK F + L + Q+A L L QV IWFQNRRA+WK
Sbjct: 1 ERRRRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 58
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 64 LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQ 108
LEK F+ L +R I+++ LGL RQ+ IWFQNRR +WK ++
Sbjct: 22 LEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P+ KR R T + Q LE K F L R +++A L L RQ+ IWFQNRR +WK
Sbjct: 3 PDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKK 62
Query: 107 KQLEK 111
+ ++
Sbjct: 63 EHKDE 67
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P+ KR R T + Q LE K F L R +++A L L RQ+ IWFQNRR +WK
Sbjct: 3 PDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKK 62
Query: 107 KQLEK 111
+ ++
Sbjct: 63 EHKDE 67
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 123 (48.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 83 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 140
>UNIPROTKB|E1B732 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0010942 "positive regulation of
cell death" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISS] [GO:0004882
"androgen receptor activity" evidence=ISS] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:0030521 "androgen receptor signaling
pathway" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0043621 "protein self-association" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060664 "epithelial cell proliferation involved
in salivary gland morphogenesis" evidence=ISS] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0071850
"mitotic cell cycle arrest" evidence=IEA] [GO:0071456 "cellular
response to hypoxia" evidence=IEA] [GO:0071356 "cellular response
to tumor necrosis factor" evidence=IEA] [GO:0071347 "cellular
response to interleukin-1" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0045930 "negative regulation
of mitotic cell cycle" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0035907 "dorsal aorta
development" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0000983 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:DAAA02023594
IPI:IPI00700831 RefSeq:NP_001178084.1 UniGene:Bt.87691 PRIDE:E1B732
Ensembl:ENSBTAT00000001615 GeneID:782252 KEGG:bta:782252
NextBio:20925348 Uniprot:E1B732
Length = 243
Score = 127 (49.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 131 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 190
Query: 107 KQLEKDYDVLQNSYNSLKA 125
KQL D L+ ++SL A
Sbjct: 191 KQLTSDLGNLEK-HSSLPA 208
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 122 (48.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 107 KQLEK 111
+ E+
Sbjct: 188 EHKEE 192
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 164 NKQEPPQISEPVADSAASEGKVCKASVVACKQEDISSAKSDIFDSD 209
+K+E P S +A + A+ A K +D + D D +
Sbjct: 189 HKEESPAASGAPEGAAPAASAAAAAAAAADKADDEDDDEEDEDDDE 234
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 122 (48.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 95 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 154
Query: 107 KQLEK 111
+ E+
Sbjct: 155 EHKEE 159
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 129 (50.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 10 RSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKS 67
R +S DV +GS R D ++ + ++ E +P K+R T +Q++ LE
Sbjct: 150 RQALSPADVEKRSGSK-----RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAE 204
Query: 68 FEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
F N L R+ ++A +L L RQV +WFQNRR +WK
Sbjct: 205 FAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|F1NXJ0 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
Length = 160
Score = 115 (45.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 59 DQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQN 118
DQ + LEK F+ + + + +LA +LGL+ QV IWFQNRR +W+ K+ +VL N
Sbjct: 22 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 78
>UNIPROTKB|E1C143 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:ASPYMYR
EMBL:AADN02027826 EMBL:AADN02027827 IPI:IPI00591458
RefSeq:XP_421631.2 Ensembl:ENSGALT00000009008 GeneID:423756
KEGG:gga:423756 NextBio:20826179 Uniprot:E1C143
Length = 292
Score = 128 (50.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 42/191 (21%), Positives = 81/191 (42%)
Query: 36 DENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAI 95
D++ ED Q ++ T Q+Q LE +F+ + + ++A L +V +
Sbjct: 47 DDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 106
Query: 96 WFQNRRARWKTKQLEKDYDVLQNSY----NSLKADYDNLFXXXXXXX-XXXXXXTDKLQV 150
WF+NRRA+W+ ++ + ++ +NS+ N L YD+++ T L
Sbjct: 107 WFKNRRAKWRKRERNQQAELCKNSFGAQFNGLMQPYDDMYSSYSYNNWATKGLATSPLSA 166
Query: 151 KEKESKNTELPVVNKQEPPQISEPVA-DSAASEGKVCKASVVACKQEDISSAKSDIFDSD 209
K N+ + V P S P + S + ++V +++ +I + +
Sbjct: 167 KSFPFFNS-MNVSPLSSQPMFSPPSSIASMTMPSSMVPSAVTGVPASSLNNL-GNINNLN 224
Query: 210 SPNYTDGVHSS 220
SP+ V SS
Sbjct: 225 SPSLNSAVSSS 235
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 116 (45.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 48 HQPEKKRRLTVDQVQF--LEKSFEVENKLE-PERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ KKRR+ + Q LE+ F + L PER+ QLA L L P QV IWFQN R +
Sbjct: 75 HEKRKKRRVLFSKAQTYELERRFRQQRYLSAPERE-QLAHLLRLTPTQVKIWFQNHRYKM 133
Query: 105 KTKQLEKDYDVLQ 117
K ++E D+ Q
Sbjct: 134 KRARIECAQDLNQ 146
>UNIPROTKB|H2L2F8 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243
GeneTree:ENSGT00700000104098 EMBL:Z81085 RefSeq:NP_001256349.1
ProteinModelPortal:H2L2F8 SMR:H2L2F8 EnsemblMetazoa:F46F3.1b
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 WormBase:F46F3.1b
Uniprot:H2L2F8
Length = 170
Score = 118 (46.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 52 KKRRL--TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
+KRR+ + QV LE+ F++ L + LAK + L QV IWFQN+R + K ++
Sbjct: 6 RKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEK 65
Query: 110 EKDYD--VLQNSYNSLKADYDN 129
EK D ++S +D DN
Sbjct: 66 EKKMDGGCYRDSDRDTDSDRDN 87
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 109 (43.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 52 KKRR--LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
++RR T +Q+ LEK F + L + Q+A L L QV IWFQNRRA+WK
Sbjct: 25 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 80
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 109 (43.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
+K R + D + LEK F + RK +LA LGL RQV IWFQNRRA K +++
Sbjct: 23 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRA--KERKI 80
Query: 110 EK 111
K
Sbjct: 81 NK 82
>UNIPROTKB|F6Y020 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9544
"Macaca mulatta" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:JV636177
RefSeq:NP_001253152.1 UniGene:Mmu.35668 Ensembl:ENSMMUT00000013683
GeneID:710591 KEGG:mcc:710591 NextBio:19966398 Uniprot:F6Y020
Length = 232
Score = 125 (49.1 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 120 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 179
Query: 107 KQLEKDYDVLQNSYNSLKADYDNLF 131
KQL + L+ ++SL A + F
Sbjct: 180 KQLSSELGDLEK-HSSLPALKEEAF 203
>UNIPROTKB|Q99801 [details] [associations]
symbol:NKX3-1 "Homeobox protein Nkx-3.1" species:9606 "Homo
sapiens" [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0035907 "dorsal aorta development" evidence=IEA]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC;IDA;NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030284 "estrogen receptor activity"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IMP] [GO:0005622 "intracellular" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0010942 "positive regulation of cell death"
evidence=IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IDA] [GO:0071850 "mitotic cell cycle arrest"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IDA] [GO:0071456 "cellular
response to hypoxia" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IDA] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IDA] [GO:0010629 "negative
regulation of gene expression" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IMP;IDA] [GO:0043569
"negative regulation of insulin-like growth factor receptor
signaling pathway" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS;IMP] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=ISS]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=ISS] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0043621
"protein self-association" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEP] [GO:0071347
"cellular response to interleukin-1" evidence=IEP] [GO:0035690
"cellular response to drug" evidence=IEP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:2001235 "positive regulation of apoptotic
signaling pathway" evidence=IDA] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:2000836 "positive regulation of androgen
secretion" evidence=IDA] [GO:0030521 "androgen receptor signaling
pathway" evidence=IDA] [GO:0071383 "cellular response to steroid
hormone stimulus" evidence=IDA] [GO:0004882 "androgen receptor
activity" evidence=IDA] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=IDA] [GO:0030295 "protein
kinase activator activity" evidence=IDA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IDA] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=IDA] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0045860
"positive regulation of protein kinase activity" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0071456 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756 GO:GO:0006919
GO:GO:0035690 GO:GO:0010942 GO:GO:0060037 GO:GO:0033574
GO:GO:0001047 Pathway_Interaction_DB:ar_pathway GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 EMBL:U91540 EMBL:U80669 EMBL:AF247704
EMBL:AF249669 EMBL:AF249670 EMBL:AF249671 EMBL:AF249672
EMBL:BC074863 EMBL:BC074864 IPI:IPI00018412 IPI:IPI00215781
IPI:IPI00215782 IPI:IPI00215783 IPI:IPI00848258
RefSeq:NP_001243268.1 RefSeq:NP_006158.2 UniGene:Hs.55999 PDB:2L9R
PDBsum:2L9R ProteinModelPortal:Q99801 SMR:Q99801 IntAct:Q99801
STRING:Q99801 PhosphoSite:Q99801 DMDM:17377578 PRIDE:Q99801
DNASU:4824 Ensembl:ENST00000380871 Ensembl:ENST00000523261
GeneID:4824 KEGG:hsa:4824 UCSC:uc011kzx.2 CTD:4824
GeneCards:GC08M023536 HGNC:HGNC:7838 HPA:HPA025693 MIM:602041
neXtProt:NX_Q99801 PharmGKB:PA31645 eggNOG:NOG238786
InParanoid:Q99801 OMA:TEPERHL OrthoDB:EOG46Q6TS PhylomeDB:Q99801
ChiTaRS:NKX3-1 GenomeRNAi:4824 NextBio:18580 Bgee:Q99801
CleanEx:HS_NKX3-1 Genevestigator:Q99801 GermOnline:ENSG00000167034
GO:GO:0035907 GO:GO:2000836 Uniprot:Q99801
Length = 234
Score = 125 (49.1 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 122 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 181
Query: 107 KQLEKDYDVLQNSYNSLKADYDNLF 131
KQL + L+ ++SL A + F
Sbjct: 182 KQLSSELGDLEK-HSSLPALKEEAF 205
>ZFIN|ZDB-GENE-080204-54 [details] [associations]
symbol:hmx1 "H6 homeo box 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0043010 "camera-type
eye development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-080204-54 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043010
GeneTree:ENSGT00700000104333 EMBL:AL929576 EMBL:EU203551
IPI:IPI00884721 UniGene:Dr.45660 Ensembl:ENSDART00000113087
HOVERGEN:HBG101086 Uniprot:B2KTE5
Length = 282
Score = 127 (49.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 36 DENGDEDFDEYFHQPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQV 93
DE D E +KK R + Q LE +F+++ L + LA L L QV
Sbjct: 135 DERSGPDTSEPGSARKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQV 194
Query: 94 AIWFQNRRARWKTKQLEKDYDVLQNSYNS 122
IWFQNRR +WK +QL D + + ++NS
Sbjct: 195 KIWFQNRRNKWK-RQLAADLEAVNFNHNS 222
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 36 DENGDEDFDEYFHQPEKKR--RLTVDQVQFLEKSF-EVENKLEPERKIQLAKDLGLQPRQ 92
D G D +KKR R T Q+Q LE SF E + E +R QL+++LGL PRQ
Sbjct: 17 DGGGSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRN-QLSRELGLAPRQ 75
Query: 93 VAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKAD 126
+ WFQNRR + K + D L+ + ++ +
Sbjct: 76 IKFWFQNRRTQLKAQHERADNSALKAENDKIRCE 109
>UNIPROTKB|F1NZL8 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AADN02056979 EMBL:AADN02056980
IPI:IPI00819365 Ensembl:ENSGALT00000038657 Uniprot:F1NZL8
Length = 153
Score = 111 (44.1 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 45 EYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
E + +P + R T +Q+ LE F L ++ LA L L QV IWFQNRR +
Sbjct: 14 ECYKKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 73
Query: 104 WKTKQ 108
WK KQ
Sbjct: 74 WK-KQ 77
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 133 (51.9 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 34 DRDENGDEDFDEYFHQPEKKRRL----TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQ 89
+ + GD E+ + RRL T Q+ LEK F L R+I++A L L
Sbjct: 179 NNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLT 238
Query: 90 PRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYD 128
RQV +WFQNRR + K + L K D +++ +SLK D D
Sbjct: 239 ERQVKVWFQNRRMKHKRQTLSKTDD--EDNKDSLKGDDD 275
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 133 (51.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 41 EDFDEYFHQPEKKR--RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQ 98
ED D P KKR R T Q+Q LE F+ + +++++L+K L L+ RQV WFQ
Sbjct: 124 EDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
Query: 99 NRRARWKTKQLEKDYDVLQNSYNS-LKAD 126
NRR + KT QLE+ + L N L+A+
Sbjct: 184 NRRTQMKT-QLERHENALLRQENDKLRAE 211
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 52 KKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
KK R + +VQ LEK F + L + LAK L + QV WFQNRR +W+ +
Sbjct: 12 KKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTA 71
Query: 110 E-KDYDVLQNSYNSLKADYD 128
E ++ + Q S L+ +D
Sbjct: 72 EEREAERQQASRLMLQLQHD 91
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
+K R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+
Sbjct: 8 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 61
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
+K R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+
Sbjct: 6 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
+K R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+
Sbjct: 6 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>ZFIN|ZDB-GENE-060421-3623 [details] [associations]
symbol:pitx1 "paired-like homeodomain
transcription factor 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-060421-3623
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG068770 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:CABZ01050114 EMBL:CABZ01050115
EMBL:EU580407 IPI:IPI00632106 UniGene:Dr.93570 STRING:B2LT56
Ensembl:ENSDART00000062803 Uniprot:B2LT56
Length = 285
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 35 RDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVA 94
R ++G+ D + Q ++ T Q+Q LE +F+ + + ++A L +V
Sbjct: 44 RSDDGNADDPKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVR 103
Query: 95 IWFQNRRARWKTKQLEKDYDVLQNSY----NSLKADYDNLF 131
+WF+NRRA+W+ ++ + D+ +NSY + L YD+++
Sbjct: 104 VWFKNRRAKWRKRERNQQMDLCKNSYLPQFSGLMQPYDDVY 144
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P ++R R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK
Sbjct: 93 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 151
Query: 107 KQLEKD 112
K+ KD
Sbjct: 152 KENNKD 157
>UNIPROTKB|Q90Z54 [details] [associations]
symbol:CDXB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 CTD:1046
EMBL:AADN02013531 EMBL:AADN02013532 EMBL:AF353624 IPI:IPI00575574
RefSeq:NP_989945.1 UniGene:Gga.49855 SMR:Q90Z54
Ensembl:ENSGALT00000012401 GeneID:395320 KEGG:gga:395320
InParanoid:Q90Z54 OMA:YHHVPNM NextBio:20815405 Uniprot:Q90Z54
Length = 263
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
EK R + D + LEK F + RK +LA +LGL RQV IWFQNRRA+ + K +
Sbjct: 153 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK-ERKII 211
Query: 110 EKDYDVLQNSYNSLKADYDNL 130
+K S S+++D +L
Sbjct: 212 KKKISQFDGSGGSVQSDSGSL 232
>UNIPROTKB|I3LFL7 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=IEA] [GO:2000836 "positive regulation of
androgen secretion" evidence=IEA] [GO:0097162 "MADS box domain
binding" evidence=IEA] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=IEA] [GO:0071850 "mitotic cell cycle
arrest" evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0071356 "cellular response to tumor necrosis
factor" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=IEA] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=IEA] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0051781 "positive regulation of cell
division" evidence=IEA] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043621 "protein
self-association" evidence=IEA] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IEA] [GO:0043491 "protein kinase B signaling cascade"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035907 "dorsal aorta development" evidence=IEA]
[GO:0035690 "cellular response to drug" evidence=IEA] [GO:0033574
"response to testosterone stimulus" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0030295 "protein
kinase activator activity" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0010942
"positive regulation of cell death" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0004882 "androgen receptor activity"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001047 "core promoter
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
GO:GO:0035690 GO:GO:0010942 GO:GO:0060037 GO:GO:0033574
GO:GO:0001047 GO:GO:0008656 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 KO:K09348 GO:GO:0071899 OMA:TEPERHL GO:GO:0035907
GO:GO:2000836 EMBL:CU607064 RefSeq:XP_003483439.1
Ensembl:ENSSSCT00000026225 GeneID:100738625 KEGG:ssc:100738625
Uniprot:I3LFL7
Length = 247
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/79 (40%), Positives = 41/79 (51%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 135 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 194
Query: 107 KQLEKDYDVLQNSYNSLKA 125
KQL D L+ + SL A
Sbjct: 195 KQLTSDLGDLEK-HPSLPA 212
>UNIPROTKB|Q9W7E8 [details] [associations]
symbol:koza "Homeobox protein koza" species:8355 "Xenopus
laevis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 HSSP:P22808
EMBL:AF127225 RefSeq:NP_001079169.1 UniGene:Xl.510
ProteinModelPortal:Q9W7E8 SMR:Q9W7E8 GeneID:373737 KEGG:xla:373737
CTD:373737 Xenbase:XB-GENE-6252708 HOVERGEN:HBG006689 KO:K09348
Uniprot:Q9W7E8
Length = 213
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/73 (41%), Positives = 39/73 (53%)
Query: 49 QPEKKRRLTVD--QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
Q +K+ R QV LE+ F + L + QLAK L L QV IWFQNRR + K
Sbjct: 100 QQQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQNRRYKTKR 159
Query: 107 KQLEKDYDVLQNS 119
KQL D + ++ S
Sbjct: 160 KQLATDMEEVEKS 172
>UNIPROTKB|G5E5Q0 [details] [associations]
symbol:BARX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042637 "catagen"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001502
GO:GO:0000976 GeneTree:ENSGT00700000104097 GO:GO:0042637
GO:GO:0014902 OMA:TQEPKAR EMBL:DAAA02063278
Ensembl:ENSBTAT00000027509 Uniprot:G5E5Q0
Length = 216
Score = 113 (44.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 49 QPEKKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
+P + R + + Q+ LEK F+ + L ++ LA+ LGL QV W+QNRR +WK
Sbjct: 69 KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKM 128
Query: 108 QLE 110
L+
Sbjct: 129 VLK 131
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 148 LQVKEKESKNTELPVVNKQEPP 169
++V E + ELPV + + PP
Sbjct: 193 VEVAESPGQAQELPVASPEPPP 214
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Query: 50 PEKKRRLTV---DQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
PE KR T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 164 PEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 222
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 127 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 186
Query: 107 KQLEK 111
+ E+
Sbjct: 187 EHKEE 191
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 60 QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
Q+ LEK+FE L + +LA LG+ QV +WFQNRR +W+ +
Sbjct: 34 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR 81
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 49 QPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
+P + R T +Q+ LE F L ++ LA L L QV IWFQNRR +WK K
Sbjct: 14 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-K 72
Query: 108 Q 108
Q
Sbjct: 73 Q 73
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
+K R + D + LEK F + RK +LA LGL RQV IWFQNRRA+
Sbjct: 7 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAK 60
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 49 QPEKKRR--LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
+P+K+ R + Q++ LE F ++ L +++ QLA L L QV IWFQNRR +++
Sbjct: 27 RPQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQK 86
Query: 107 KQ 108
+Q
Sbjct: 87 QQ 88
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 50 PEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQ 108
P + R T +Q+ LE F+ L ++ LA L L QV IWFQNRR +WK KQ
Sbjct: 1 PRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 59
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 10 RSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKS 67
R +S +V +GS R D ++ + ++ E +P K+R T +Q++ LE
Sbjct: 150 RQALSPAEVEKRSGSK-----RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAE 204
Query: 68 FEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
F N L R+ ++A +L L RQV +WFQNRR +WK
Sbjct: 205 FAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 10 RSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKS 67
R +S +V +GS R D ++ + ++ E +P K+R T +Q++ LE
Sbjct: 150 RQALSPAEVEKRSGSK-----RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAE 204
Query: 68 FEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
F N L R+ ++A +L L RQV +WFQNRR +WK
Sbjct: 205 FAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|F6ZYW8 [details] [associations]
symbol:LOC100412294 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942
GO:GO:0033574 GO:GO:0001047 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0030331 GO:GO:0060770 GO:GO:2001244
GO:GO:0043569 GO:GO:0048754 GeneTree:ENSGT00700000104206
GO:GO:2001022 GO:GO:0060442 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 EMBL:ACFV01082154
Ensembl:ENSCJAT00000039452 Uniprot:F6ZYW8
Length = 230
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 49 QPEKKRRLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
QP+K+ R Q LE+ F + L + LAK+L L QV IWFQNRR + K
Sbjct: 118 QPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKR 177
Query: 107 KQLEKDYDVLQN--SYNSLKAD 126
KQL + L+ S ++LK +
Sbjct: 178 KQLSSELGDLEKRASSSALKEE 199
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 147 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 204
>FB|FBgn0000439 [details] [associations]
symbol:Dfd "Deformed" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007420 "brain
development" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS;TAS] [GO:0007380 "specification of segmental identity,
head" evidence=NAS] [GO:0060322 "head development" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=IGI;IMP] [GO:0048598
"embryonic morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0007420 GO:GO:0006917 GO:GO:0048598
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0003705
GO:GO:0000122 EMBL:AE001572 GO:GO:0000977 GO:GO:0060322 EMBL:X05136
EMBL:M13373 PIR:A26638 RefSeq:NP_477201.1 UniGene:Dm.5282
ProteinModelPortal:P07548 SMR:P07548 DIP:DIP-18055N IntAct:P07548
MINT:MINT-858733 STRING:P07548 EnsemblMetazoa:FBtr0081621
GeneID:40832 KEGG:dme:Dmel_CG2189 UCSC:CG2189-RA CTD:40832
FlyBase:FBgn0000439 eggNOG:NOG314883 HOGENOM:HOG000290519
InParanoid:P07548 KO:K09304 OMA:DLMAETT OrthoDB:EOG49CNQM
PhylomeDB:P07548 GenomeRNAi:40832 NextBio:820832 Bgee:P07548
GermOnline:CG2189 Uniprot:P07548
Length = 586
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/139 (30%), Positives = 65/139 (46%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
+P+++R T Q+ LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 365 EPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK-- 422
Query: 108 QLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNTELPVVNKQE 167
KD + L N+ N K D K Q + ++ + ++ Q+
Sbjct: 423 ---KD-NKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQ--QTQQ 476
Query: 168 PPQISEPV-ADSAASEGKV 185
P ++E + +DS S G V
Sbjct: 477 TPVMNECIRSDSLESIGDV 495
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 122 (48.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 143 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 145 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 202
>UNIPROTKB|E1BHR6 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
Length = 222
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210
Query: 105 KTKQLEKDYDVL 116
K K + L
Sbjct: 211 KKDSKMKSKEAL 222
>UNIPROTKB|J9P833 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
Ensembl:ENSCAFT00000049441 Uniprot:J9P833
Length = 222
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210
Query: 105 KTKQLEKDYDVL 116
K K + L
Sbjct: 211 KKDSKMKSKEAL 222
>UNIPROTKB|Q00444 [details] [associations]
symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
GermOnline:ENSG00000172789 Uniprot:Q00444
Length = 222
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210
Query: 105 KTKQLEKDYDVL 116
K K + L
Sbjct: 211 KKDSKMKSKEAL 222
>UNIPROTKB|I3LRP3 [details] [associations]
symbol:LOC100627840 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
KEGG:ssc:100627840 Uniprot:I3LRP3
Length = 222
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210
Query: 105 KTKQLEKDYDVL 116
K K + L
Sbjct: 211 KKDSKMKSKEAL 222
>MGI|MGI:96196 [details] [associations]
symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
GermOnline:ENSMUSG00000022485 Uniprot:P32043
Length = 222
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210
Query: 105 KTKQLEKDYDVL 116
K K + L
Sbjct: 211 KKDSKMKSKEAL 222
>RGD|1307584 [details] [associations]
symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
NextBio:669109 Uniprot:D3ZP88
Length = 222
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210
Query: 105 KTKQLEKDYDVL 116
K K + L
Sbjct: 211 KKDSKMKSKEAL 222
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 155 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 155 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 155 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 155 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 155 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|F7ENZ5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9258
"Ornithorhynchus anatinus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919
GO:GO:0035690 GO:GO:0010942 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 OMA:YCLGGWN
EMBL:AAPN01142035 EMBL:AAPN01142036 EMBL:AAPN01142037
EMBL:AAPN01142038 EMBL:AAPN01142039 EMBL:AAPN01142040
EMBL:AAPN01142041 EMBL:AAPN01142042 EMBL:AAPN01142043
EMBL:AAPN01142044 EMBL:AAPN01142045 EMBL:AAPN01142046
EMBL:AAPN01142047 Ensembl:ENSOANT00000012766 Uniprot:F7ENZ5
Length = 180
Score = 117 (46.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/73 (42%), Positives = 40/73 (54%)
Query: 49 QPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
QP++ R + QV LE+ F + L + LAK+L L QV IWFQNRR + K K
Sbjct: 69 QPKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 128
Query: 108 QLEKDY-DVLQNS 119
QL D D+ NS
Sbjct: 129 QLTSDLGDLDPNS 141
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 153 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWK 210
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 52 KKR-RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
KKR T Q LEK F L ER+++++K + L RQV IWFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 82
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
EK R + D + LEK F + RK +LA +LGL RQV WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAK 55
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 36 DENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAI 95
++ G ED + Q ++ T Q+Q LE +F+ + + ++A L +V +
Sbjct: 26 EDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 85
Query: 96 WFQNRRARWKTKQLEKDYDVLQNSY 120
WF+NRRA+W+ ++ + ++ +N +
Sbjct: 86 WFKNRRAKWRKRERNQQAELCKNGF 110
>WB|WBGene00000428 [details] [associations]
symbol:ceh-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080880 EMBL:X52810 PIR:S13128
PIR:T16081 PIR:T37298 RefSeq:NP_508796.1 ProteinModelPortal:P53547
SMR:P53547 EnsemblMetazoa:F16H11.4.1 EnsemblMetazoa:F16H11.4.2
GeneID:191614 KEGG:cel:CELE_F16H11.4 UCSC:F16H11.4 CTD:191614
WormBase:F16H11.4 eggNOG:NOG286158 HOGENOM:HOG000020299
InParanoid:P53547 OMA:DANTPQT NextBio:949682 Uniprot:P53547
Length = 132
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 57 TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVL 116
T +Q+ LE F+ L ++ LA L L QV IWFQNRR +WK +D +
Sbjct: 9 TYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWKKHNPGQDANTP 68
Query: 117 QNSYNS 122
Q +S
Sbjct: 69 QTPPSS 74
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 149 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>UNIPROTKB|F1S9I5 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IEA] [GO:0045629 "negative
regulation of T-helper 2 cell differentiation" evidence=IEA]
[GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 OMA:ESTQAPL
EMBL:CU855622 Ensembl:ENSSSCT00000011848 Uniprot:F1S9I5
Length = 245
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 64 LEKSFEVENKL-EPERKIQLAKDLGLQPRQVAIWFQNRRARW---KTKQLEKDYD 114
LEK FE++ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 49 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 102
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 31 RPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D ++ + ++ E +P K+R T +Q++ LE F N L R+ ++A +L L
Sbjct: 165 RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDL 224
Query: 89 QPRQVAIWFQNRRARWK 105
RQV +WFQNRR +WK
Sbjct: 225 TERQVKVWFQNRRMKWK 241
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 31 RPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D ++ + ++ E +P K+R T +Q++ LE F N L R+ ++A +L L
Sbjct: 166 RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDL 225
Query: 89 QPRQVAIWFQNRRARWK 105
RQV +WFQNRR +WK
Sbjct: 226 TERQVKVWFQNRRMKWK 242
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 31 RPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D ++ + ++ E +P K+R T +Q++ LE F N L R+ ++A +L L
Sbjct: 166 RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDL 225
Query: 89 QPRQVAIWFQNRRARWK 105
RQV +WFQNRR +WK
Sbjct: 226 TERQVKVWFQNRRMKWK 242
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 31 RPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D ++ + ++ E +P K+R T +Q++ LE F N L R+ ++A +L L
Sbjct: 166 RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDL 225
Query: 89 QPRQVAIWFQNRRARWK 105
RQV +WFQNRR +WK
Sbjct: 226 TERQVKVWFQNRRMKWK 242
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 150 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 209
Query: 108 QLEKDYDVLQNS 119
+ + NS
Sbjct: 210 HKLPNTKIRSNS 221
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 31 RPFDRDENGDEDF-DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
R D ++ + ++ E +P K+R T +Q++ LE F N L R+ ++A +L L
Sbjct: 167 RKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDL 226
Query: 89 QPRQVAIWFQNRRARWK 105
RQV +WFQNRR +WK
Sbjct: 227 TERQVKVWFQNRRMKWK 243
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 151 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 151 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 205
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 205
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 150 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 207
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 153 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 210
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 154 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 211
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 159 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 214
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 179 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 236
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 179 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 236
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 156 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 213
>RGD|3331 [details] [associations]
symbol:Pitx2 "paired-like homeodomain 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001191 "RNA
polymerase II transcription factor binding transcription factor
activity involved in negative regulation of transcription"
evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0002074 "extraocular skeletal muscle development"
evidence=ISO] [GO:0003171 "atrioventricular valve development"
evidence=ISO] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=ISO] [GO:0003350
"pulmonary myocardium development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007507 "heart development" evidence=ISO] [GO:0007519 "skeletal
muscle tissue development" evidence=ISO] [GO:0007520 "myoblast
fusion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008584 "male gonad development" evidence=IEP]
[GO:0008585 "female gonad development" evidence=IEP] [GO:0009653
"anatomical structure morphogenesis" evidence=ISO] [GO:0009725
"response to hormone stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISO] [GO:0021763 "subthalamic nucleus development"
evidence=ISO] [GO:0021855 "hypothalamus cell migration" evidence=ISO]
[GO:0021983 "pituitary gland development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0030324 "lung development"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0031076 "embryonic camera-type eye development"
evidence=ISO] [GO:0031490 "chromatin DNA binding" evidence=ISO]
[GO:0033189 "response to vitamin A" evidence=IEP] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=ISO]
[GO:0035993 "deltoid tuberosity development" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEP]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=ISO] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048536 "spleen development" evidence=ISO] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISO] [GO:0048738 "cardiac
muscle tissue development" evidence=ISO] [GO:0051219 "phosphoprotein
binding" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=ISO] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=ISO] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=ISO] [GO:0055123 "digestive system
development" evidence=ISO] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISO] [GO:0060460 "left lung morphogenesis"
evidence=ISO] [GO:0060577 "pulmonary vein morphogenesis"
evidence=ISO] [GO:0060578 "superior vena cava morphogenesis"
evidence=ISO] [GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISO] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=ISO] [GO:0070986 "left/right axis
specification" evidence=ISO] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:3331 GO:GO:0005634 GO:GO:0005737 GO:GO:0001764 GO:GO:0007420
GO:GO:0016055 GO:GO:0030182 GO:GO:0008585 GO:GO:0001078 GO:GO:0001701
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0008584
GO:GO:0000978 GO:GO:0001077 GO:GO:0030334 GO:GO:0009725 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0001570 GO:GO:0042475 GO:GO:0035116
GO:GO:0031076 GO:GO:0021983 GO:GO:0033189 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557 GO:GO:0061031
GO:GO:0021855 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171 GO:GO:0061072
GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:AF039832 EMBL:AJ222971 EMBL:AJ222972 IPI:IPI00206778
IPI:IPI00231533 RefSeq:NP_001035970.1 RefSeq:NP_062207.1
UniGene:Rn.17591 ProteinModelPortal:Q9R0W1 SMR:Q9R0W1 STRING:Q9R0W1
PRIDE:Q9R0W1 Ensembl:ENSRNOT00000014368 Ensembl:ENSRNOT00000044232
GeneID:54284 KEGG:rno:54284 UCSC:RGD:3331 InParanoid:Q9R0W1
NextBio:610866 ArrayExpress:Q9R0W1 Genevestigator:Q9R0W1
GermOnline:ENSRNOG00000010681 Uniprot:Q9R0W1
Length = 324
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 37/146 (25%), Positives = 73/146 (50%)
Query: 1 MTSLINSG-PRSMVSFE---DVHLANGSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRR- 55
M S++ G PRS+ + + +VH + +++ P D+ + G + D P KK+R
Sbjct: 35 MASVLAPGQPRSLDASKHRLEVHTISDTSS-PEVAEKDKGQQGKNE-DVGAEDPSKKKRQ 92
Query: 56 ------LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
T Q+Q LE +F+ + + ++A L +V +WF+NRRA+W+ ++
Sbjct: 93 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER 152
Query: 110 EKDYDVLQNSY----NSLKADYDNLF 131
+ ++ +N + N L YD+++
Sbjct: 153 NQQAELCKNGFGPQFNGLMQPYDDMY 178
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 37 EN-GDEDFDEYFHQPEKKRRL---TVDQVQFLEKSF-EVENKLEPERKIQLAKDLGLQPR 91
EN E+ + +P KK+R T Q+Q LE F E + + +RK +L++DL L+P
Sbjct: 46 ENPSGEELQDPSQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRK-ELSRDLNLEPL 104
Query: 92 QVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKAD 126
QV WFQN+R + K + + +L++ + L+A+
Sbjct: 105 QVKFWFQNKRTQMKAQSERHENQILKSDNDKLRAE 139
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 52 KKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
K R + D Q+Q LE +FE + L + +++LA +GL QV W+QNRR +WK +Q
Sbjct: 96 KARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWK-RQAS 154
Query: 111 KDYDVLQNSYN 121
D+L ++ N
Sbjct: 155 VGMDLLHDAGN 165
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H P ++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +W
Sbjct: 145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 204
Query: 105 KTKQLEKD 112
K K+ KD
Sbjct: 205 K-KENNKD 211
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H P ++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +W
Sbjct: 145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 204
Query: 105 KTKQLEKD 112
K K+ KD
Sbjct: 205 K-KENNKD 211
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H P ++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +W
Sbjct: 145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 204
Query: 105 KTKQLEKD 112
K K+ KD
Sbjct: 205 K-KENNKD 211
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H P ++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +W
Sbjct: 145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 204
Query: 105 KTKQLEKD 112
K K+ KD
Sbjct: 205 K-KENNKD 211
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H P ++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +W
Sbjct: 145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 204
Query: 105 KTKQLEKD 112
K K+ KD
Sbjct: 205 K-KENNKD 211
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 121 (47.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H P ++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +W
Sbjct: 145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 204
Query: 105 KTKQLEKD 112
K K+ KD
Sbjct: 205 K-KENNKD 211
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 51 EKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRAR 103
EK R + D + LEK F + RK +LA +L L RQV IWFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAK 55
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 60 QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
Q+ LEK F L R++++A+ L L+ QV +WFQNRR + K ++ E+
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 52 KKR-RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
KKR T Q LEK F L ER++++++ + L RQV IWFQNRR + K E
Sbjct: 21 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRE 80
Query: 111 KDYDVLQNSYN 121
L ++N
Sbjct: 81 NRIRELTANFN 91
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 52 KKR-RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
KKR T Q LEK F L ER++++++ + L RQV IWFQNRR + K E
Sbjct: 22 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRE 81
Query: 111 KDYDVLQNSYN 121
L ++N
Sbjct: 82 NRIRELTANFN 92
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 57 TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
T Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K Q K
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 57 TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
T Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K Q K
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>ZFIN|ZDB-GENE-031016-2 [details] [associations]
symbol:hopx "HOP homeobox" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-031016-2 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 CTD:84525 GeneTree:ENSGT00390000017143
HOGENOM:HOG000112932 HOVERGEN:HBG051921 EMBL:AF536198 EMBL:BC096856
EMBL:BC153537 IPI:IPI00498482 RefSeq:NP_937852.1 UniGene:Dr.117691
UniGene:Dr.151001 ProteinModelPortal:Q8AYB8 SMR:Q8AYB8 PRIDE:Q8AYB8
Ensembl:ENSDART00000125203 GeneID:386589 KEGG:dre:386589
NextBio:20813951 Bgee:Q8AYB8 Uniprot:Q8AYB8
Length = 77
Score = 104 (41.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQL-AKDLGLQPRQVAIWFQNRRARWK 105
RLT DQV+ LE++F +K E + L A + GL Q A+WF+ R A+W+
Sbjct: 12 RLTEDQVKVLEENFTKVSKHPDETTLMLIAAECGLSEEQTAVWFRMRNAQWR 63
>UNIPROTKB|F8VVX3 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL445423 HGNC:HGNC:4978 IPI:IPI00643042
ProteinModelPortal:F8VVX3 SMR:F8VVX3 Ensembl:ENST00000549319
OMA:ESTQAPL ArrayExpress:F8VVX3 Bgee:F8VVX3 Uniprot:F8VVX3
Length = 274
Score = 122 (48.0 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 64 LEKSFEVENKL-EPERKIQLAKDLGLQPRQVAIWFQNRRARW---KTKQLEKDYD 114
LEK FE++ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 77 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 130
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/92 (33%), Positives = 52/92 (56%)
Query: 37 ENGDEDFDEYFHQPEKK-RRLTVDQVQFLEKSF-EVENKLEPERKIQLAKDLGLQPRQVA 94
+N D E ++ +K+ R T Q+Q LE +F E ++ E +R QL+++LGL PRQ+
Sbjct: 8 QNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRN-QLSRELGLAPRQIK 66
Query: 95 IWFQNRRARWKTKQLEKDYDVLQNSYNSLKAD 126
WFQNRR + K + D L+ + ++ +
Sbjct: 67 FWFQNRRTQKKAQHERADNCALKEENDKIRCE 98
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 208 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 208 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 123 (48.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 211 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 268
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 213 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 270
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 214 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 271
>UNIPROTKB|F1PUX5 [details] [associations]
symbol:BARX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 EMBL:AAEX03003352 EMBL:AAEX03003353
Ensembl:ENSCAFT00000016227 Uniprot:F1PUX5
Length = 222
Score = 113 (44.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 49 QPEKKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTK 107
+P + R + + Q+ LEK F+ + L ++ LA+ LGL QV W+QNRR +WK
Sbjct: 75 KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKM 134
Query: 108 QLE 110
L+
Sbjct: 135 VLK 137
Score = 40 (19.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 152 EKESKNTELPVVNKQEPP 169
E S+ ELP+ + + PP
Sbjct: 203 EPPSQPQELPIASSEPPP 220
>MGI|MGI:96188 [details] [associations]
symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
GermOnline:ENSMUSG00000038721 Uniprot:P09024
Length = 217
Score = 119 (46.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 135 PDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 193
>ZFIN|ZDB-GENE-060118-2 [details] [associations]
symbol:barhl1b "BarH-like 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-060118-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09360 HOVERGEN:HBG050663 EMBL:AY596176 IPI:IPI00511307
RefSeq:NP_001018142.1 UniGene:Dr.88513 ProteinModelPortal:Q53B64
SMR:Q53B64 GeneID:553186 KEGG:dre:553186 CTD:553186
InParanoid:Q53B64 NextBio:20879985 Uniprot:Q53B64
Length = 323
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 16 EDVHLANGSNNRPFF--RPFDRDENGDEDFDEY-FHQPEKKRRLTVD-QVQFLEKSFEVE 71
E +H +N S++ + DR+ + D + +P K R D Q+ LE+SFE +
Sbjct: 138 EKIH-SNSSSDSEYKVKEEGDREISSSRDSPQVRLKKPRKARTAFTDHQLAQLERSFERQ 196
Query: 72 NKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYN 121
L + +++LA L L QV W+QNRR +WK +Q ++L + N
Sbjct: 197 KYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK-RQTAVGLELLAEAGN 245
>UNIPROTKB|F1NPY3 [details] [associations]
symbol:F1NPY3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
Uniprot:F1NPY3
Length = 204
Score = 118 (46.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 50 PEKKRRLT---VDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW-K 105
P KK+ T +Q++ LEK F+ + + E++ ++A +G+ P+++ +WFQNRRA+W K
Sbjct: 7 PVKKKTRTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWRK 66
Query: 106 TKQ 108
T++
Sbjct: 67 TEK 69
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R+I++A L L RQV IWFQNRR +WK
Sbjct: 221 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 278
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 110 (43.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/79 (39%), Positives = 39/79 (49%)
Query: 34 DRDENGDEDFDEYFHQPEKKRRLTVDQVQF-LEKSFEVENKLEPERKIQLAKDLGLQPRQ 92
DR E G +K R + D + LEK F + RK +LA LGL RQ
Sbjct: 14 DRGE-GHRSASVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQ 72
Query: 93 VAIWFQNRRARWKTKQLEK 111
V IWFQNRRA K +++ K
Sbjct: 73 VKIWFQNRRA--KERKINK 89
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 103 (41.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 51 EKKRR--LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+K+ R T +Q+Q L+ F+ + +R+ LA++L L Q+ IWFQN+RA+ K
Sbjct: 3 DKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 103 (41.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 50 PEKKR-RLTVDQVQF--LEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P+KK+ R + ++Q LEK F + L + LAK L + QV WFQNRR +W+
Sbjct: 10 PKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRR 69
Query: 107 KQLEK 111
+ E+
Sbjct: 70 QTAEE 74
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 103 (41.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 33 FDRDENGDEDF---DEYFHQPEKKRR-LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGL 88
F ++ E F + +P++ R + Q+ LE +FE + + + QLA L L
Sbjct: 16 FQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSL 75
Query: 89 QPRQVAIWFQNRRARWKTKQLEKD 112
QV +WFQNRR ++K ++LE++
Sbjct: 76 TETQVKVWFQNRRTKFKRQKLEEE 99
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 103 (41.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 52 KKR-RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
KKR T Q LEK F L +R+ ++A+ L L RQV IWFQNRR K K++
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRM--KMKKIN 105
Query: 111 KD 112
KD
Sbjct: 106 KD 107
>UNIPROTKB|F1NDR5 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00596089
GeneTree:ENSGT00700000104333 EMBL:AADN02014984
Ensembl:ENSGALT00000025153 Uniprot:F1NDR5
Length = 298
Score = 122 (48.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 34 DRDENGDEDFD-EYFHQPEKKRRLTV---DQVQFLEKSFEVENKLEPERKIQLAKDLGLQ 89
+ +E G+E + E KK+ TV QV LE +F+V+ L + LA L L
Sbjct: 147 EEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLT 206
Query: 90 PRQVAIWFQNRRARWKTKQLEKDYDVLQNSY 120
QV IWFQNRR +WK +QL D + S+
Sbjct: 207 ETQVKIWFQNRRNKWK-RQLAADLEAANLSH 236
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 119 (46.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 127 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 186
Query: 107 KQLEK 111
+ ++
Sbjct: 187 EHKDE 191
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 160 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 160 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 51 EKKR--RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQ 108
+KKR R T Q+Q +E F+ + + +++L+K LGL P QV WFQN+R + K +Q
Sbjct: 88 KKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQ 147
Query: 109 LEKDYDVLQNSYNSLKADYDNL 130
D L+ +LK + N+
Sbjct: 148 SRSDNAKLKAENETLKTESQNI 169
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 119 (46.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 107 KQLEK 111
+ ++
Sbjct: 188 EHKDE 192
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 161 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 161 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 161 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 161 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 161 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>MGI|MGI:103220 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10090 "Mus
musculus" [GO:0001757 "somite specification" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:103220 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757 CTD:4222
eggNOG:NOG282563 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J EMBL:Z15103 EMBL:BC011082
IPI:IPI00108443 PIR:A49122 RefSeq:NP_034921.1 UniGene:Mm.3404
ProteinModelPortal:P32442 SMR:P32442 STRING:P32442 PRIDE:P32442
Ensembl:ENSMUST00000057054 GeneID:17285 KEGG:mmu:17285
NextBio:291792 Bgee:P32442 CleanEx:MM_MEOX1 Genevestigator:P32442
GermOnline:ENSMUSG00000001493 Uniprot:P32442
Length = 253
Score = 120 (47.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 34 DRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQV 93
D ENG + +++ T +Q++ LE F N L R+ ++A +L L RQV
Sbjct: 155 DNQENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQV 214
Query: 94 AIWFQNRRARWK 105
+WFQNRR +WK
Sbjct: 215 KVWFQNRRMKWK 226
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 119 (46.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 107 KQLEK 111
+ ++
Sbjct: 188 EHKDE 192
>UNIPROTKB|Q06615 [details] [associations]
symbol:noto "Homeobox protein notochord" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=IC] [GO:0014028
"notochord formation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0014028
HOVERGEN:HBG082047 EMBL:Z19577 EMBL:BC123237 PIR:A46305
RefSeq:NP_001081625.1 UniGene:Xl.35 HSSP:P14653
ProteinModelPortal:Q06615 GeneID:397961 KEGG:xla:397961 CTD:397961
Xenbase:XB-GENE-865187 Uniprot:Q06615
Length = 236
Score = 119 (46.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 32 PFDRDENGDEDFDEYFHQPEKKRRL----TVDQVQFLEKSFEVENKLEPERKIQLAKDLG 87
PF NG + + P K +R+ T +Q++ LEK F + + ++ LA L
Sbjct: 117 PFSHCPNGAMNPLSWRTGPCKMKRIRTVFTPEQLEKLEKEFLKQQYMVGTERVDLASTLN 176
Query: 88 LQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKAD 126
L QV +WFQNRR +W+ + LE+ L + + + AD
Sbjct: 177 LTETQVKVWFQNRRIKWRKQSLEQKKAKL-SQFGVIPAD 214
>UNIPROTKB|D6RFI4 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AC017068
HOGENOM:HOG000273886 HGNC:HGNC:9005 ChiTaRS:PITX2 IPI:IPI00968016
ProteinModelPortal:D6RFI4 SMR:D6RFI4 Ensembl:ENST00000511837
ArrayExpress:D6RFI4 Bgee:D6RFI4 Uniprot:D6RFI4
Length = 290
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 27/113 (23%), Positives = 57/113 (50%)
Query: 23 GSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQL 82
G+N + + ++ G ED + Q ++ T Q+Q LE +F+ + + ++
Sbjct: 59 GANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 118
Query: 83 AKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSY----NSLKADYDNLF 131
A L +V +WF+NRRA+W+ ++ + ++ +N + N L YD+++
Sbjct: 119 AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMY 171
>UNIPROTKB|F1NDR4 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:AADN02014984 IPI:IPI00574330
Ensembl:ENSGALT00000025154 Uniprot:F1NDR4
Length = 330
Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 34 DRDENGDEDFD-EYFHQPEKKRRLTV---DQVQFLEKSFEVENKLEPERKIQLAKDLGLQ 89
+ +E G+E + E KK+ TV QV LE +F+V+ L + LA L L
Sbjct: 146 EEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLT 205
Query: 90 PRQVAIWFQNRRARWKTKQLEKDYDVLQNSY 120
QV IWFQNRR +WK +QL D + S+
Sbjct: 206 ETQVKIWFQNRRNKWK-RQLAADLEAANLSH 235
>UNIPROTKB|E2R5U1 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
Uniprot:E2R5U1
Length = 239
Score = 119 (46.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 107 KQLEK 111
+ ++
Sbjct: 188 EHKDE 192
>UNIPROTKB|Q9DE09 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AF227921 IPI:IPI00596089 RefSeq:NP_990864.1
UniGene:Gga.14432 HSSP:P13297 ProteinModelPortal:Q9DE09
GeneID:396546 KEGG:gga:396546 CTD:3166 eggNOG:NOG241326
HOGENOM:HOG000231923 HOVERGEN:HBG031610 KO:K09349 OrthoDB:EOG434W7H
NextBio:20816582 Uniprot:Q9DE09
Length = 333
Score = 122 (48.0 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 34 DRDENGDEDFD-EYFHQPEKKRRLTV---DQVQFLEKSFEVENKLEPERKIQLAKDLGLQ 89
+ +E G+E + E KK+ TV QV LE +F+V+ L + LA L L
Sbjct: 182 EEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLT 241
Query: 90 PRQVAIWFQNRRARWKTKQLEKDYDVLQNSY 120
QV IWFQNRR +WK +QL D + S+
Sbjct: 242 ETQVKIWFQNRRNKWK-RQLAADLEAANLSH 271
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 102 (41.0 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 60 QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
Q+ LEK F L R++++A+ L L+ QV +WFQNRR + K ++ E
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|Q90789 [details] [associations]
symbol:Cnot "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0030903 "notochord development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099625 HOVERGEN:HBG016849 OrthoDB:EOG48GW4Q
HSSP:P14653 eggNOG:NOG249605 EMBL:AADN02049007 EMBL:X82575
IPI:IPI00679844 PIR:I50622 UniGene:Gga.677
Ensembl:ENSGALT00000037091 HOGENOM:HOG000202447 InParanoid:Q90789
Uniprot:Q90789
Length = 111
Score = 102 (41.0 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 50 PEKKRRL-TV---DQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
P K +R+ TV +Q++ LE+ F + + ++ LA L L QV +WFQNRR +W+
Sbjct: 13 PCKMKRVRTVFKPEQLERLEQEFLKQQYMVGTERVDLAATLRLTETQVKVWFQNRRIKWR 72
Query: 106 TKQLEK 111
+ +E+
Sbjct: 73 KQSMEQ 78
>UNIPROTKB|F1SHT4 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
Length = 241
Score = 119 (46.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P++KR R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 107 KQLEK 111
+ ++
Sbjct: 188 EHKDE 192
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 129 (50.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 39/101 (38%), Positives = 56/101 (55%)
Query: 38 NGDEDFDEYFHQPEKKRRLTVD------QVQFLEKSF-EVENKLEPERKIQLAKDLGLQP 90
+GDED E +P+KK+R T Q+Q LE F E + E +R ++L K L L+
Sbjct: 42 SGDEDKQE--QRPKKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQR-LELGKKLTLES 98
Query: 91 RQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLF 131
+Q+ WFQNRR + KT QLE+ +V+ N K +N F
Sbjct: 99 KQIKFWFQNRRTQMKT-QLERHENVILKQENE-KLRLENSF 137
Score = 37 (18.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 197 DISSAKSDIFDSD 209
D SS+ SD FD+D
Sbjct: 614 DGSSSSSDQFDTD 626
>UNIPROTKB|F1NA89 [details] [associations]
symbol:HMX3 "Homeobox protein HMX3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060135 "maternal process involved in
female pregnancy" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104333 IPI:IPI00589100
OMA:PGAEDWK EMBL:AADN02031045 Ensembl:ENSGALT00000011810
ArrayExpress:F1NA89 Uniprot:F1NA89
Length = 308
Score = 121 (47.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 35 RDENGDEDFDEYFHQPEKK-----RRLTV---DQVQFLEKSFEVENKLEPERKIQLAKDL 86
+ E G ED+ + PEKK + TV QV LE +F+++ L + LA L
Sbjct: 159 KKEGGAEDWKKREESPEKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASL 218
Query: 87 GLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSY 120
L QV IWFQNRR +WK +QL + + S+
Sbjct: 219 HLTETQVKIWFQNRRNKWK-RQLAAELEAANLSH 251
>UNIPROTKB|O57601 [details] [associations]
symbol:HMX3 "Homeobox protein HMX3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HSSP:P13297 HOGENOM:HOG000231923 KO:K09349 EMBL:Y15989
IPI:IPI00589100 RefSeq:NP_001007986.1 UniGene:Gga.22889
ProteinModelPortal:O57601 STRING:O57601 GeneID:429199
KEGG:gga:429199 CTD:340784 eggNOG:NOG312519 HOVERGEN:HBG098273
InParanoid:O57601 OrthoDB:EOG4T1HN9 NextBio:20829989 Uniprot:O57601
Length = 308
Score = 121 (47.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 35 RDENGDEDFDEYFHQPEKK-----RRLTV---DQVQFLEKSFEVENKLEPERKIQLAKDL 86
+ E G ED+ + PEKK + TV QV LE +F+++ L + LA L
Sbjct: 159 KKEGGAEDWKKREESPEKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASL 218
Query: 87 GLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSY 120
L QV IWFQNRR +WK +QL + + S+
Sbjct: 219 HLTETQVKIWFQNRRNKWK-RQLAAELEAANLSH 251
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 120 (47.3 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 49 QPEKKRRL-TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
+P++ R T QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 168 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 225
>UNIPROTKB|Q99697 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001569 "patterning
of blood vessels" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021763 "subthalamic
nucleus development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007368
"determination of left/right symmetry" evidence=ISS] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IPI] [GO:0048536 "spleen development" evidence=ISS]
[GO:0070986 "left/right axis specification" evidence=ISS]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0061072
"iris morphogenesis" evidence=IMP] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001105 "RNA polymerase
II transcription coactivator activity" evidence=IDA] [GO:0060127
"prolactin secreting cell differentiation" evidence=TAS]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0042476 "odontogenesis" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IC] [GO:0051219 "phosphoprotein binding"
evidence=IPI] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=IMP] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IDA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IPI]
[GO:0035315 "hair cell differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 GO:GO:0000981
GO:GO:0007368 GO:GO:0001569 GO:GO:0007520 GO:GO:0048536
EMBL:CH471057 GO:GO:0001570 GO:GO:0035116 GO:GO:0070986
GO:GO:0031076 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0043021
GO:GO:0031490 GO:GO:0055015 GO:GO:0001191 GO:GO:0055009
GO:GO:0035993 GO:GO:0043388 GO:GO:0002074 GO:GO:0060460
GO:GO:0060412 MIM:604229 Orphanet:708 GO:GO:0035315 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 Orphanet:98978 Orphanet:782
Orphanet:91483 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171
GO:GO:0061072 GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113
HOVERGEN:HBG068770 CTD:5308 KO:K04686 OMA:DMYPSYT EMBL:U69961
EMBL:AF048720 EMBL:AF048721 EMBL:AF048722 EMBL:AF238048
EMBL:AK127829 EMBL:AK313987 EMBL:BC013998 EMBL:BC106010
IPI:IPI00017093 IPI:IPI00220801 IPI:IPI00220802 RefSeq:NP_000316.2
RefSeq:NP_001191326.1 RefSeq:NP_001191327.1 RefSeq:NP_001191328.1
RefSeq:NP_700475.1 RefSeq:NP_700476.1 UniGene:Hs.643588
UniGene:Hs.738484 PDB:2L7F PDB:2L7M PDB:2LKX PDBsum:2L7F
PDBsum:2L7M PDBsum:2LKX ProteinModelPortal:Q99697 SMR:Q99697
IntAct:Q99697 STRING:Q99697 DMDM:6174907 PRIDE:Q99697 DNASU:5308
Ensembl:ENST00000306732 Ensembl:ENST00000354925
Ensembl:ENST00000355080 Ensembl:ENST00000394598 GeneID:5308
KEGG:hsa:5308 UCSC:uc003iac.3 UCSC:uc003iad.3 UCSC:uc003iae.3
GeneCards:GC04M111538 HGNC:HGNC:9005 MIM:137600 MIM:180500
MIM:180550 MIM:601542 neXtProt:NX_Q99697 Orphanet:91481
PharmGKB:PA33339 OrthoDB:EOG4W9J4N ChiTaRS:PITX2
EvolutionaryTrace:Q99697 GenomeRNAi:5308 NextBio:20518
ArrayExpress:Q99697 Bgee:Q99697 CleanEx:HS_PITX2
Genevestigator:Q99697 GermOnline:ENSG00000164093 GO:GO:0060127
GO:GO:0060577 GO:GO:0060126 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 Uniprot:Q99697
Length = 317
Score = 121 (47.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 27/113 (23%), Positives = 57/113 (50%)
Query: 23 GSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQL 82
G+N + + ++ G ED + Q ++ T Q+Q LE +F+ + + ++
Sbjct: 59 GANEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 118
Query: 83 AKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSY----NSLKADYDNLF 131
A L +V +WF+NRRA+W+ ++ + ++ +N + N L YD+++
Sbjct: 119 AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMY 171
>RGD|1308911 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001757 "somite specification" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0071837 "HMG box
domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308911 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH473948
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J IPI:IPI00203787 RefSeq:NP_001102307.1
UniGene:Rn.149759 Ensembl:ENSRNOT00000028220 GeneID:363684
KEGG:rno:363684 UCSC:RGD:1308911 NextBio:683991 Uniprot:D4A532
Length = 253
Score = 119 (46.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 34 DRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQV 93
D ENG + +++ T +Q++ LE F N L R+ ++A +L L RQV
Sbjct: 155 DNPENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQV 214
Query: 94 AIWFQNRRARWK 105
+WFQNRR +WK
Sbjct: 215 KVWFQNRRMKWK 226
>WB|WBGene00000584 [details] [associations]
symbol:cog-1 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0007389 "pattern
specification process" evidence=IMP] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0018991
GO:GO:0008406 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007368
GeneTree:ENSGT00680000099625 HSSP:P13297 EMBL:Z82279 EMBL:AY151209
PIR:T23866 RefSeq:NP_001022264.1 UniGene:Cel.20704
ProteinModelPortal:G5EGE2 SMR:G5EGE2 IntAct:G5EGE2
EnsemblMetazoa:R03C1.3a GeneID:175149 KEGG:cel:CELE_R03C1.3
CTD:175149 WormBase:R03C1.3a OMA:ASGDKSP NextBio:886968
Uniprot:G5EGE2
Length = 256
Score = 119 (46.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 10 RSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRR--LTVDQVQFLEKS 67
R++ SF ++ G+ P P R ++ + + +K+ R T Q+ LE+
Sbjct: 130 RALTSFNLLNNLPGA--LPSLSPMGRLQHSMQLSPNSLNMQKKQSRPTFTGHQIYQLERK 187
Query: 68 FEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQ 108
FE L + QLA++L + QV +WFQNRR +W+ K+
Sbjct: 188 FEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKE 228
>ZFIN|ZDB-GENE-980526-533 [details] [associations]
symbol:hoxc5a "homeo box C5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
Length = 233
Score = 118 (46.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 48 HQPEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARW 104
H+ + KR R + + Q LE K F L R+I++A +L L RQ+ IWFQNRR +W
Sbjct: 162 HESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 221
Query: 105 K 105
K
Sbjct: 222 K 222
>WB|WBGene00000437 [details] [associations]
symbol:ceh-13 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0040007
GO:GO:0007411 GO:GO:0002119 GO:GO:0043565 GO:GO:0016358
GO:GO:0010171 GO:GO:0040018 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009790
GO:GO:0016337 GO:GO:0007413 GeneTree:ENSGT00700000104189
EMBL:X17077 EMBL:FO080424 PIR:S09505 RefSeq:NP_498655.1
ProteinModelPortal:P17488 SMR:P17488 STRING:P17488
EnsemblMetazoa:R13A5.5 GeneID:176069 KEGG:cel:CELE_R13A5.5
UCSC:R13A5.5 CTD:176069 WormBase:R13A5.5 eggNOG:NOG236971
HOGENOM:HOG000018801 InParanoid:P17488 KO:K09301 OMA:QHNTYKW
NextBio:890976 Uniprot:P17488
Length = 202
Score = 116 (45.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 53 KRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 112
+ T Q+ LEK F + R+ ++A +L LQ QV IWFQNRR + K ++ EK
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKREKEKA 177
Query: 113 YDVLQNSYNS 122
+ + +N++ S
Sbjct: 178 F-LARNTWES 186
>UNIPROTKB|E2QT33 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026688 Uniprot:E2QT33
Length = 237
Score = 118 (46.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
K+ R T + Q LE K F L R+I++A L L RQ+ IWFQNRR +WK +
Sbjct: 138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
Query: 110 EKDYDVLQNSYNSLKA 125
+S SL+A
Sbjct: 198 STGPGATASSAGSLRA 213
>WB|WBGene00000451 [details] [associations]
symbol:ceh-30 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 118 (46.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 52 KKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
K R + D Q+Q LE +FE + L + ++ LA +GL QV W+QNRR +WK +Q
Sbjct: 97 KARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWK-RQAT 155
Query: 111 KDYDVLQNSYN 121
D+L N
Sbjct: 156 SGMDLLSEPGN 166
>UNIPROTKB|Q22909 [details] [associations]
symbol:ceh-30 "Homeobox protein ceh-30" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0007548 "sex differentiation" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 118 (46.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 52 KKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
K R + D Q+Q LE +FE + L + ++ LA +GL QV W+QNRR +WK +Q
Sbjct: 97 KARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWK-RQAT 155
Query: 111 KDYDVLQNSYN 121
D+L N
Sbjct: 156 SGMDLLSEPGN 166
>WB|WBGene00000447 [details] [associations]
symbol:ceh-24 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0034243 "regulation of transcription elongation
from RNA polymerase II promoter" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0040011 GO:GO:0000003 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0040015 GO:GO:0034243 EMBL:AF026056 EMBL:Z79757 PIR:T22698
PIR:T37251 RefSeq:NP_506419.3 ProteinModelPortal:Q9NLC2 SMR:Q9NLC2
EnsemblMetazoa:F55B12.1 GeneID:179877 KEGG:cel:CELE_F55B12.1
UCSC:F55B12.1 CTD:179877 WormBase:F55B12.1 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000112912 InParanoid:Q9NLC2
OMA:NWYNGND NextBio:907234 Uniprot:Q9NLC2
Length = 299
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 45/136 (33%), Positives = 62/136 (45%)
Query: 52 KKRRLTVDQVQF--LEKSFEVENKLE-PERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQ 108
+KRR+ Q Q LE+ F+ L PER+ QLA + L P QV IWFQN R + K ++
Sbjct: 151 RKRRVLFSQAQVYELERRFKQAKYLTAPERE-QLANSIRLTPTQVKIWFQNHRYKCKRQE 209
Query: 109 LEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNTEL-P--VVNK 165
EK L +S + DN DK +E+ES+ L P V
Sbjct: 210 KEKAMSGLGHSEDGSSPPPDN----DDDDDKYSIEMDDKDDEEEEESEKPVLKPSGVFGL 265
Query: 166 QEPPQISEPVADSAAS 181
PP + A +AA+
Sbjct: 266 PYPPNAAAAAAAAAAA 281
>UNIPROTKB|Q9NLC2 [details] [associations]
symbol:ceh-24 "Homeobox protein ceh-24" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0040011 GO:GO:0000003 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0040015 GO:GO:0034243 EMBL:AF026056 EMBL:Z79757 PIR:T22698
PIR:T37251 RefSeq:NP_506419.3 ProteinModelPortal:Q9NLC2 SMR:Q9NLC2
EnsemblMetazoa:F55B12.1 GeneID:179877 KEGG:cel:CELE_F55B12.1
UCSC:F55B12.1 CTD:179877 WormBase:F55B12.1 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000112912 InParanoid:Q9NLC2
OMA:NWYNGND NextBio:907234 Uniprot:Q9NLC2
Length = 299
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 45/136 (33%), Positives = 62/136 (45%)
Query: 52 KKRRLTVDQVQF--LEKSFEVENKLE-PERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQ 108
+KRR+ Q Q LE+ F+ L PER+ QLA + L P QV IWFQN R + K ++
Sbjct: 151 RKRRVLFSQAQVYELERRFKQAKYLTAPERE-QLANSIRLTPTQVKIWFQNHRYKCKRQE 209
Query: 109 LEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNTEL-P--VVNK 165
EK L +S + DN DK +E+ES+ L P V
Sbjct: 210 KEKAMSGLGHSEDGSSPPPDN----DDDDDKYSIEMDDKDDEEEEESEKPVLKPSGVFGL 265
Query: 166 QEPPQISEPVADSAAS 181
PP + A +AA+
Sbjct: 266 PYPPNAAAAAAAAAAA 281
>ZFIN|ZDB-GENE-050417-212 [details] [associations]
symbol:barhl1a "BarH-like 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050417-212
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 HOVERGEN:HBG050663 EMBL:BX276128
EMBL:AY596187 IPI:IPI00627489 UniGene:Dr.110809 SMR:Q53B63
Ensembl:ENSDART00000051474 OMA:PERIPKK Uniprot:Q53B63
Length = 299
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 34 DRDENGDEDF-DEYFHQPEKKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPR 91
DR+ + D + +P K R D Q+ LE+SFE + L + +++LA L L
Sbjct: 138 DREISSSRDSPNSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDT 197
Query: 92 QVAIWFQNRRARWKTKQLEKDYDVLQNSYN 121
QV W+QNRR +WK +Q ++L + N
Sbjct: 198 QVKTWYQNRRTKWK-RQTAVGLELLAEAGN 226
>UNIPROTKB|E2R2R4 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0046622 "positive regulation of
organ growth" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0045627
"positive regulation of T-helper 1 cell differentiation"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0001889
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557
Ensembl:ENSCAFT00000018023 Uniprot:E2R2R4
Length = 405
Score = 122 (48.0 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 64 LEKSFEVENKL-EPERKIQLAKDLGLQPRQVAIWFQNRRARW---KTKQLEKDYD 114
LEK FE++ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 291 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 344
>ZFIN|ZDB-GENE-040628-4 [details] [associations]
symbol:bsx "brain specific homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040628-4 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104097 EMBL:BX120005 IPI:IPI00931915
Ensembl:ENSDART00000090003 Uniprot:F1R6K5
Length = 245
Score = 118 (46.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 31/79 (39%), Positives = 42/79 (53%)
Query: 52 KKRRLTVD-QVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
K R + D Q+ LEK FE++ L +++LA L L QV WFQNRR + K KQL
Sbjct: 125 KARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQLR 183
Query: 111 KDYDVLQNSYNSLKADYDN 129
K D Q + N + +N
Sbjct: 184 KTQDD-QKTPNDVDRSLEN 201
>UNIPROTKB|E1C676 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AADN02020025 EMBL:AADN02020026 EMBL:AADN02020027
EMBL:AADN02020028 EMBL:AADN02020029 EMBL:AADN02020030
IPI:IPI00581324 Ensembl:ENSGALT00000029909 OMA:PERTECA
ArrayExpress:E1C676 Uniprot:E1C676
Length = 307
Score = 120 (47.3 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P ++R R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK
Sbjct: 240 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 298
Query: 107 KQLEKD 112
K+ KD
Sbjct: 299 KENNKD 304
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 114 (45.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P ++R R T + Q LE K F L +R+I+++ L L RQV IWFQNRR +WK
Sbjct: 91 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK- 149
Query: 107 KQLEKD 112
K+ KD
Sbjct: 150 KENNKD 155
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 114 (45.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 25 NNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTV---DQVQFLEKSFEVENKLEPERKIQ 81
++RP P R E E+KR T DQ+ L+ F L +R+ +
Sbjct: 60 SDRPSAGPRHRKSRKRESTGSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQE 119
Query: 82 LAKDLGLQPRQVAIWFQNRRARWK--TKQLEKDY--DVLQNSYN 121
LA +LGL Q+ IWFQN+RA+ K T + +D V N +N
Sbjct: 120 LAHELGLNESQIKIWFQNKRAKLKKSTSSVPRDRCSSVTPNPHN 163
>MGI|MGI:109340 [details] [associations]
symbol:Pitx2 "paired-like homeodomain transcription factor 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=ISO]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=ISO] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002074 "extraocular skeletal muscle development"
evidence=IMP] [GO:0003171 "atrioventricular valve development"
evidence=IMP] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IMP] [GO:0003350
"pulmonary myocardium development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0007507 "heart development"
evidence=IGI;IMP] [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007520 "myoblast fusion" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IDA] [GO:0021763 "subthalamic
nucleus development" evidence=IMP] [GO:0021855 "hypothalamus cell
migration" evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0031076 "embryonic camera-type eye development" evidence=IMP]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=ISO;IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042476 "odontogenesis" evidence=ISO;IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0055007
"cardiac muscle cell differentiation" evidence=IMP] [GO:0055009
"atrial cardiac muscle tissue morphogenesis" evidence=IMP]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=IMP] [GO:0060460 "left lung morphogenesis" evidence=IMP]
[GO:0060577 "pulmonary vein morphogenesis" evidence=IMP]
[GO:0060578 "superior vena cava morphogenesis" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IMP] [GO:0070986 "left/right axis
specification" evidence=IMP] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109340 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0000981 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0048536 GO:GO:0001570
GO:GO:0035116 GO:GO:0070986 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438
CTD:5308 KO:K04686 OMA:DMYPSYT OrthoDB:EOG4W9J4N GO:GO:0060577
GO:GO:0021763 GO:GO:0060578 GO:GO:0035886 EMBL:U80036 EMBL:U80010
EMBL:U80011 EMBL:AB006320 EMBL:AB006321 EMBL:AF048723 EMBL:AF048724
EMBL:AJ243597 EMBL:AF201091 EMBL:U70132 IPI:IPI00125578
IPI:IPI00230555 IPI:IPI00230556 IPI:IPI00885427 IPI:IPI00885862
RefSeq:NP_001035967.1 RefSeq:NP_001035969.1 RefSeq:NP_035228.2
UniGene:Mm.246804 ProteinModelPortal:P97474 SMR:P97474
IntAct:P97474 STRING:P97474 PRIDE:P97474 Ensembl:ENSMUST00000042587
Ensembl:ENSMUST00000106382 Ensembl:ENSMUST00000172645
Ensembl:ENSMUST00000174661 GeneID:18741 KEGG:mmu:18741
UCSC:uc008rhu.1 UCSC:uc008rhv.1 NextBio:294885 Bgee:P97474
CleanEx:MM_PITX2 Genevestigator:P97474
GermOnline:ENSMUSG00000028023 Uniprot:P97474
Length = 317
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 27/113 (23%), Positives = 57/113 (50%)
Query: 23 GSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPERKIQL 82
G+N + + ++ G ED + Q ++ T Q+Q LE +F+ + + ++
Sbjct: 59 GANEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 118
Query: 83 AKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSY----NSLKADYDNLF 131
A L +V +WF+NRRA+W+ ++ + ++ +N + N L YD+++
Sbjct: 119 AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMY 171
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 120 (47.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/57 (45%), Positives = 30/57 (52%)
Query: 55 RLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEK 111
R T Q + LE F L PE + LA L L RQV WFQNRRA+W+ L K
Sbjct: 200 RFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSK 256
>UNIPROTKB|F6XFB6 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 OMA:AHPHASF Ensembl:ENSCAFT00000018023
EMBL:AAEX03018361 EMBL:AAEX03018362 Uniprot:F6XFB6
Length = 438
Score = 122 (48.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 64 LEKSFEVENKL-EPERKIQLAKDLGLQPRQVAIWFQNRRARW---KTKQLEKDYD 114
LEK FE++ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 291 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 344
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 40 DEDFDEYFHQPEKKRRL---TVDQVQFLEKSF-EVENKLEPERKIQLAKDLGLQPRQVAI 95
+E+ + +P KK+R T Q+Q LE F E + + +RK +L+++L L+P QV
Sbjct: 50 EEELQDPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRK-ELSRELSLEPLQVKF 108
Query: 96 WFQNRRARWKTKQLEKDYDVLQNSYNSLKAD 126
WFQN+R + K + + +L++ + L+A+
Sbjct: 109 WFQNKRTQMKAQHERHENQILKSENDKLRAE 139
>UNIPROTKB|F1LRM4 [details] [associations]
symbol:Dbx2 "Protein Dbx2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 CTD:440097
IPI:IPI00387767 RefSeq:XP_001053826.1 RefSeq:XP_001058743.1
UniGene:Rn.93216 Ensembl:ENSRNOT00000009143 GeneID:541457
KEGG:rno:541457 RGD:1359605 NextBio:714075 Uniprot:F1LRM4
Length = 377
Score = 121 (47.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 23 GSNNRPFF-RPFDRDENG----DEDFDEYFHQPEKKRRL-TVDQVQFLEKSFEVENKLEP 76
GS RP F R+E+G +D + + +R + + DQ + LEK F+ + +
Sbjct: 194 GSCRRPASPTAFSREEHGLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISK 253
Query: 77 ERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQN 118
+ +LA LGL+ QV IWFQNRR +W+ K+ +VL N
Sbjct: 254 TDRRKLAISLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 292
>UNIPROTKB|E1BRT6 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104054 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 IPI:IPI00820869
Ensembl:ENSGALT00000038688 ArrayExpress:E1BRT6 Uniprot:E1BRT6
Length = 329
Score = 120 (47.3 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 50 PEKKR-RLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 106
P ++R R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK
Sbjct: 264 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 322
Query: 107 KQLEKD 112
K+ KD
Sbjct: 323 KENNKD 328
>WB|WBGene00000449 [details] [associations]
symbol:ceh-27 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0043565 GO:GO:0010171 GO:GO:0000003 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0034243 HSSP:P23441 eggNOG:NOG301813
GeneTree:ENSGT00700000104098 EMBL:Z81085 GeneID:185853
KEGG:cel:CELE_F46F3.1 CTD:185853 PIR:T22313 RefSeq:NP_001256348.1
ProteinModelPortal:Q9XVN4 SMR:Q9XVN4 IntAct:Q9XVN4 STRING:Q9XVN4
EnsemblMetazoa:F46F3.1a UCSC:F46F3.1 WormBase:F46F3.1a
HOGENOM:HOG000022497 InParanoid:Q9XVN4 OMA:EKKMDGG NextBio:929744
Uniprot:Q9XVN4
Length = 263
Score = 118 (46.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 52 KKRRL--TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
+KRR+ + QV LE+ F++ L + LAK + L QV IWFQN+R + K ++
Sbjct: 99 RKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEK 158
Query: 110 EKDYD--VLQNSYNSLKADYDN 129
EK D ++S +D DN
Sbjct: 159 EKKMDGGCYRDSDRDTDSDRDN 180
>UNIPROTKB|Q9XVN4 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243 HSSP:P23441
eggNOG:NOG301813 GeneTree:ENSGT00700000104098 EMBL:Z81085
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 PIR:T22313
RefSeq:NP_001256348.1 ProteinModelPortal:Q9XVN4 SMR:Q9XVN4
IntAct:Q9XVN4 STRING:Q9XVN4 EnsemblMetazoa:F46F3.1a UCSC:F46F3.1
WormBase:F46F3.1a HOGENOM:HOG000022497 InParanoid:Q9XVN4
OMA:EKKMDGG NextBio:929744 Uniprot:Q9XVN4
Length = 263
Score = 118 (46.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 52 KKRRL--TVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
+KRR+ + QV LE+ F++ L + LAK + L QV IWFQN+R + K ++
Sbjct: 99 RKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEK 158
Query: 110 EKDYD--VLQNSYNSLKADYDN 129
EK D ++S +D DN
Sbjct: 159 EKKMDGGCYRDSDRDTDSDRDN 180
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 117 (46.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK K+
Sbjct: 145 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KEN 203
Query: 110 EKD 112
KD
Sbjct: 204 NKD 206
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 117 (46.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK K+
Sbjct: 146 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KEN 204
Query: 110 EKD 112
KD
Sbjct: 205 NKD 207
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 117 (46.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK K+
Sbjct: 146 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KEN 204
Query: 110 EKD 112
KD
Sbjct: 205 NKD 207
>UNIPROTKB|Q9W694 [details] [associations]
symbol:BARX2B "Homeodomain transcription factor BARX2B"
species:9031 "Gallus gallus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001502 "cartilage condensation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0042637 "catagen" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0000976 HOVERGEN:HBG050665 HSSP:P06602
GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 KO:K09361
CTD:8538 eggNOG:NOG324720 OMA:VITRQPP OrthoDB:EOG45TCP8
EMBL:AADN02041992 EMBL:AF102555 IPI:IPI00582899 RefSeq:NP_990227.1
UniGene:Gga.3060 SMR:Q9W694 STRING:Q9W694
Ensembl:ENSGALT00000001814 GeneID:395714 KEGG:gga:395714
InParanoid:Q9W694 NextBio:20815784 Uniprot:Q9W694
Length = 267
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 21 ANGSNNRPFFRPFDRDENGDEDFDEYFHQPEKKRRLTVD-QVQFLEKSFEVENKLEPERK 79
A S+ P E+ E +P + R + + Q+ LEK F+ + L +
Sbjct: 97 ATASSETPASETHGSSESEAEQPTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDR 156
Query: 80 IQLAKDLGLQPRQVAIWFQNRRARWKTKQLE 110
+ LA+ LGL QV W+QNRR +WK L+
Sbjct: 157 LDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 187
>UNIPROTKB|Q2PYN8 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
Uniprot:Q2PYN8
Length = 267
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 37/137 (27%), Positives = 62/137 (45%)
Query: 50 PEKKRR----LTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 105
P+K+R+ T Q+ LEK F + L P + Q+A+ LGL QV WFQNRRA+
Sbjct: 124 PKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK-- 181
Query: 106 TKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNTELPVVNK 165
L++D + ++ S K + +++ S++ +L + +
Sbjct: 182 ---LKRDLEEMKADVESTKKMSPSAVEAVLTISELEESGSER---GNSRSRSPQLGLTSN 235
Query: 166 QEPPQISEPVADSAASE 182
P S P+ D AS+
Sbjct: 236 HMPLSPSXPLTDQHASK 252
>UNIPROTKB|P17481 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007625 "grooming
behavior" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0019233 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0045638 GO:GO:0021516
HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V EMBL:AY014294
EMBL:AY014293 EMBL:X16173 IPI:IPI00014536 PIR:B37042
RefSeq:NP_076921.1 UniGene:Hs.514292 ProteinModelPortal:P17481
SMR:P17481 STRING:P17481 PhosphoSite:P17481 DMDM:20141506
PRIDE:P17481 DNASU:3218 Ensembl:ENST00000239144 GeneID:3218
KEGG:hsa:3218 UCSC:uc002inw.3 CTD:3218 GeneCards:GC17M046688
HGNC:HGNC:5119 MIM:142963 neXtProt:NX_P17481 PharmGKB:PA29395
InParanoid:P17481 KO:K09308 OMA:MERAQEV GenomeRNAi:3218
NextBio:12804 Bgee:P17481 CleanEx:HS_HOXB8 Genevestigator:P17481
GermOnline:ENSG00000120068 Uniprot:P17481
Length = 243
Score = 117 (46.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK K+
Sbjct: 147 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KEN 205
Query: 110 EKD 112
KD
Sbjct: 206 NKD 208
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 117 (46.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK K+
Sbjct: 147 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KEN 205
Query: 110 EKD 112
KD
Sbjct: 206 NKD 208
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 117 (46.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KKRRLTVDQVQFLE--KSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQL 109
++ R T + Q LE K F L +R+I+++ LGL RQV IWFQNRR +WK K+
Sbjct: 147 RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KEN 205
Query: 110 EKD 112
KD
Sbjct: 206 NKD 208
>MGI|MGI:96109 [details] [associations]
symbol:Hlx "H2.0-like homeobox" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IGI;IMP] [GO:0045629 "negative regulation
of T-helper 2 cell differentiation" evidence=IGI;IMP] [GO:0046622
"positive regulation of organ growth" evidence=IMP] [GO:0048484
"enteric nervous system development" evidence=IMP] [GO:0048513
"organ development" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96109 GO:GO:0005634 GO:GO:0030154
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GeneTree:ENSGT00700000104097 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 CTD:3142 eggNOG:NOG331357
HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339 OMA:AHPHASF
OrthoDB:EOG473PRM EMBL:X58250 IPI:IPI00123711 PIR:A39621
RefSeq:NP_032276.1 UniGene:Mm.1347 ProteinModelPortal:Q61670
SMR:Q61670 STRING:Q61670 PRIDE:Q61670 Ensembl:ENSMUST00000048572
GeneID:15284 KEGG:mmu:15284 InParanoid:Q61670 NextBio:287919
Bgee:Q61670 CleanEx:MM_HLX Genevestigator:Q61670
GermOnline:ENSMUSG00000039377 Uniprot:Q61670
Length = 476
Score = 122 (48.0 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 64 LEKSFEVENKL-EPERKIQLAKDLGLQPRQVAIWFQNRRARW---KTKQLEKDYD 114
LEK FE++ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 288 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 341
WARNING: HSPs involving 298 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 289 262 0.00091 114 3 11 23 0.40 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 548
No. of states in DFA: 603 (64 KB)
Total size of DFA: 219 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.84u 0.13s 26.97t Elapsed: 00:00:01
Total cpu time: 26.85u 0.13s 26.98t Elapsed: 00:00:01
Start: Sat May 11 04:40:59 2013 End: Sat May 11 04:41:00 2013
WARNINGS ISSUED: 2