Query 022967
Match_columns 289
No_of_seqs 209 out of 1978
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 14:07:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 9.6E-27 3.3E-31 201.8 20.5 207 74-283 16-248 (322)
2 3dr2_A Exported gluconolactona 99.9 3.2E-24 1.1E-28 184.4 24.0 212 67-283 36-258 (305)
3 3sre_A PON1, serum paraoxonase 99.9 5.6E-24 1.9E-28 185.4 21.8 209 67-282 41-285 (355)
4 3e5z_A Putative gluconolactona 99.9 2.2E-22 7.5E-27 171.8 25.2 211 68-286 20-239 (296)
5 3g4e_A Regucalcin; six bladed 99.9 9.9E-22 3.4E-26 168.3 21.5 200 76-285 12-220 (297)
6 2p4o_A Hypothetical protein; p 99.9 2.3E-20 8E-25 160.5 26.8 189 68-283 25-231 (306)
7 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 1.8E-20 6.3E-25 160.5 21.7 211 68-283 10-245 (314)
8 3v64_C Agrin; beta propeller, 99.8 2.6E-18 8.8E-23 150.5 23.6 184 76-284 72-265 (349)
9 2ghs_A AGR_C_1268P; regucalcin 99.8 2.1E-18 7.1E-23 149.6 22.3 203 68-286 40-253 (326)
10 4hw6_A Hypothetical protein, I 99.8 1.6E-18 5.5E-23 156.0 21.1 186 75-284 137-364 (433)
11 3v65_B Low-density lipoprotein 99.8 3.2E-18 1.1E-22 151.9 22.5 184 76-284 115-308 (386)
12 2dg1_A DRP35, lactonase; beta 99.8 4E-18 1.4E-22 147.4 22.4 194 76-283 44-252 (333)
13 1q7f_A NHL, brain tumor CG1071 99.8 3.4E-18 1.2E-22 144.8 21.4 185 74-284 27-227 (286)
14 3a9g_A Putative uncharacterize 99.8 2.1E-18 7.1E-23 151.3 20.3 211 67-284 20-286 (354)
15 1ijq_A LDL receptor, low-densi 99.8 7E-18 2.4E-22 145.8 23.1 184 76-284 29-228 (316)
16 2ism_A Putative oxidoreductase 99.8 2.9E-18 1E-22 150.3 20.3 210 67-285 22-288 (352)
17 1rwi_B Serine/threonine-protei 99.8 1E-17 3.5E-22 140.3 21.7 184 76-284 66-254 (270)
18 3fvz_A Peptidyl-glycine alpha- 99.8 7.6E-18 2.6E-22 146.1 21.1 156 76-248 23-226 (329)
19 1npe_A Nidogen, entactin; glyc 99.8 1E-17 3.5E-22 140.9 20.9 184 76-284 35-228 (267)
20 3sov_A LRP-6, low-density lipo 99.8 8E-18 2.7E-22 145.5 20.6 183 76-283 34-227 (318)
21 1rwi_B Serine/threonine-protei 99.8 1.4E-17 4.9E-22 139.5 21.6 180 78-283 25-211 (270)
22 3das_A Putative oxidoreductase 99.8 4.2E-17 1.5E-21 141.5 24.1 167 66-239 22-222 (347)
23 1q7f_A NHL, brain tumor CG1071 99.8 1.9E-17 6.3E-22 140.3 20.8 185 76-285 76-272 (286)
24 4a0p_A LRP6, LRP-6, low-densit 99.8 4.1E-17 1.4E-21 153.1 24.1 185 74-284 34-227 (628)
25 2qc5_A Streptogramin B lactona 99.8 7.8E-17 2.7E-21 136.5 23.6 184 76-287 103-294 (300)
26 3hrp_A Uncharacterized protein 99.8 8.9E-17 3E-21 143.7 24.5 183 75-282 129-341 (409)
27 2qc5_A Streptogramin B lactona 99.8 9.4E-17 3.2E-21 136.0 23.5 182 76-284 19-208 (300)
28 3tc9_A Hypothetical hydrolase; 99.8 2.3E-17 8E-22 148.3 20.6 186 75-284 135-361 (430)
29 3p5b_L Low density lipoprotein 99.8 4.8E-17 1.6E-21 145.0 22.2 183 76-283 111-309 (400)
30 2z2n_A Virginiamycin B lyase; 99.8 9.9E-17 3.4E-21 135.9 22.4 184 76-286 56-248 (299)
31 2z2n_A Virginiamycin B lyase; 99.8 1.7E-16 5.9E-21 134.3 23.6 181 76-283 14-202 (299)
32 2qe8_A Uncharacterized protein 99.8 9.8E-17 3.4E-21 140.0 21.2 192 77-284 17-268 (343)
33 3s94_A LRP-6, low-density lipo 99.8 2.5E-16 8.5E-21 147.6 24.2 185 75-284 347-541 (619)
34 3s94_A LRP-6, low-density lipo 99.8 9.6E-17 3.3E-21 150.4 21.4 183 76-283 39-232 (619)
35 3dsm_A Uncharacterized protein 99.7 3.7E-16 1.3E-20 135.5 22.7 188 76-281 83-285 (328)
36 2g8s_A Glucose/sorbosone dehyd 99.7 1.2E-16 4E-21 140.1 19.7 166 67-238 9-217 (353)
37 3hrp_A Uncharacterized protein 99.7 4.5E-16 1.5E-20 139.2 22.2 189 76-285 171-401 (409)
38 3m0c_C LDL receptor, low-densi 99.7 1E-15 3.5E-20 146.6 24.0 183 76-283 423-621 (791)
39 4a0p_A LRP6, LRP-6, low-densit 99.7 2.1E-15 7.3E-20 141.4 22.4 185 75-283 338-538 (628)
40 4hw6_A Hypothetical protein, I 99.7 1.8E-15 6.3E-20 136.0 20.5 187 75-284 180-423 (433)
41 3fvz_A Peptidyl-glycine alpha- 99.7 3.6E-15 1.2E-19 129.2 21.3 177 72-250 86-323 (329)
42 2fp8_A Strictosidine synthase; 99.7 1.2E-15 4.1E-20 131.8 17.6 178 77-283 80-302 (322)
43 1n7d_A LDL receptor, low-densi 99.7 2.2E-16 7.4E-21 150.1 13.1 183 76-283 405-603 (699)
44 3v64_C Agrin; beta propeller, 99.7 8.3E-15 2.8E-19 128.2 21.8 179 80-284 37-224 (349)
45 1npe_A Nidogen, entactin; glyc 99.7 1.6E-14 5.4E-19 121.3 22.1 176 75-276 77-263 (267)
46 3tc9_A Hypothetical hydrolase; 99.7 4.4E-15 1.5E-19 133.5 18.6 187 76-284 178-420 (430)
47 3e5z_A Putative gluconolactona 99.7 3.1E-14 1.1E-18 121.0 22.6 177 76-283 68-277 (296)
48 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.1E-14 3.7E-19 124.4 19.5 180 77-283 71-288 (314)
49 3v65_B Low-density lipoprotein 99.7 1.6E-14 5.4E-19 128.1 21.0 180 79-284 79-267 (386)
50 2p9w_A MAL S 1 allergenic prot 99.6 6.9E-15 2.4E-19 125.5 17.4 189 76-284 12-255 (334)
51 3sov_A LRP-6, low-density lipo 99.6 1.4E-14 5E-19 125.0 19.6 149 76-248 78-237 (318)
52 3kya_A Putative phosphatase; s 99.6 1.2E-14 4E-19 131.5 19.5 185 76-284 138-400 (496)
53 1ijq_A LDL receptor, low-densi 99.6 6.8E-14 2.3E-18 120.7 22.5 171 75-272 75-258 (316)
54 3g4e_A Regucalcin; six bladed 99.6 1.4E-14 4.8E-19 123.7 17.4 182 77-286 54-265 (297)
55 1cru_A Protein (soluble quinop 99.6 1.4E-14 4.8E-19 130.9 17.6 171 67-240 18-249 (454)
56 3dr2_A Exported gluconolactona 99.6 6.1E-14 2.1E-18 120.1 19.4 181 76-283 85-297 (305)
57 3p5b_L Low density lipoprotein 99.6 1.4E-13 4.8E-18 122.6 20.5 151 73-247 155-318 (400)
58 3vgz_A Uncharacterized protein 99.6 9E-13 3.1E-17 114.0 24.1 189 77-283 41-251 (353)
59 3kya_A Putative phosphatase; s 99.6 1.4E-13 4.8E-18 124.5 19.1 156 76-250 246-476 (496)
60 3vgz_A Uncharacterized protein 99.6 9.4E-13 3.2E-17 113.8 23.3 182 79-283 143-334 (353)
61 2qe8_A Uncharacterized protein 99.6 2.6E-13 8.7E-18 118.3 19.3 186 75-284 65-311 (343)
62 3dsm_A Uncharacterized protein 99.6 6.9E-13 2.4E-17 114.8 21.8 183 77-281 44-243 (328)
63 2dg1_A DRP35, lactonase; beta 99.6 4.9E-13 1.7E-17 115.3 20.8 181 77-284 87-301 (333)
64 3hfq_A Uncharacterized protein 99.5 2.8E-12 9.4E-17 111.2 23.4 189 76-283 39-260 (347)
65 3m0c_C LDL receptor, low-densi 99.5 6E-13 2E-17 127.5 20.6 176 82-283 390-578 (791)
66 3hfq_A Uncharacterized protein 99.5 4.5E-12 1.5E-16 109.9 24.1 190 76-283 85-306 (347)
67 3hxj_A Pyrrolo-quinoline quino 99.5 4.7E-12 1.6E-16 108.7 23.7 176 80-286 140-317 (330)
68 2ghs_A AGR_C_1268P; regucalcin 99.5 8.1E-13 2.8E-17 114.3 18.0 180 77-286 90-295 (326)
69 2wg3_C Hedgehog-interacting pr 99.5 6.5E-13 2.2E-17 120.0 17.5 166 68-237 6-242 (463)
70 2p4o_A Hypothetical protein; p 99.5 2.1E-12 7.3E-17 110.6 19.8 182 77-283 72-278 (306)
71 3qqz_A Putative uncharacterize 99.5 1.2E-11 4.2E-16 102.7 23.2 191 76-284 26-244 (255)
72 4a2l_A BT_4663, two-component 99.5 1.8E-12 6.3E-17 125.0 20.9 184 79-287 359-565 (795)
73 3a9g_A Putative uncharacterize 99.5 5.2E-12 1.8E-16 110.6 21.8 186 76-282 72-330 (354)
74 3v9f_A Two-component system se 99.5 1.4E-12 4.7E-17 125.7 19.3 186 79-287 315-518 (781)
75 4a2l_A BT_4663, two-component 99.4 5.9E-12 2E-16 121.5 20.6 185 79-286 312-519 (795)
76 3v9f_A Two-component system se 99.4 4.8E-12 1.6E-16 121.9 19.9 182 79-284 409-603 (781)
77 2ism_A Putative oxidoreductase 99.4 6.5E-12 2.2E-16 109.9 18.8 189 76-283 74-334 (352)
78 3u4y_A Uncharacterized protein 99.4 7.7E-11 2.6E-15 101.1 24.8 182 76-282 40-240 (331)
79 1n7d_A LDL receptor, low-densi 99.4 2.8E-12 9.7E-17 121.8 16.6 149 76-248 452-613 (699)
80 3u4y_A Uncharacterized protein 99.4 2.4E-11 8.4E-16 104.2 21.0 188 77-284 83-294 (331)
81 2iwa_A Glutamine cyclotransfer 99.4 4.6E-11 1.6E-15 99.8 18.7 187 67-282 11-225 (266)
82 3hxj_A Pyrrolo-quinoline quino 99.4 9.7E-11 3.3E-15 100.4 21.1 174 82-287 103-278 (330)
83 3no2_A Uncharacterized protein 99.3 2.1E-10 7.3E-15 96.8 20.9 186 77-285 37-234 (276)
84 1ri6_A Putative isomerase YBHE 99.3 7.8E-10 2.7E-14 94.7 24.4 185 78-282 85-296 (343)
85 2iwa_A Glutamine cyclotransfer 99.3 3.2E-10 1.1E-14 94.7 21.1 155 74-249 63-237 (266)
86 3nol_A Glutamine cyclotransfer 99.3 5.8E-10 2E-14 92.3 21.8 150 78-248 88-255 (262)
87 1jof_A Carboxy-CIS,CIS-muconat 99.3 5.9E-10 2E-14 97.5 23.3 188 76-283 39-275 (365)
88 3scy_A Hypothetical bacterial 99.3 7.5E-10 2.6E-14 96.3 22.3 186 77-283 100-326 (361)
89 3ott_A Two-component system se 99.3 3.3E-10 1.1E-14 108.8 20.6 180 79-284 375-578 (758)
90 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.7E-10 9.3E-15 99.7 18.2 190 78-283 84-330 (365)
91 3nok_A Glutaminyl cyclase; bet 99.3 1.2E-09 4.1E-14 90.5 20.8 149 78-247 97-264 (268)
92 1pby_B Quinohemoprotein amine 99.3 2.4E-09 8.3E-14 91.4 23.1 194 78-284 35-301 (337)
93 1l0q_A Surface layer protein; 99.3 1.7E-09 5.8E-14 94.8 22.4 178 77-281 32-218 (391)
94 3mbr_X Glutamine cyclotransfer 99.2 3E-09 1E-13 87.2 21.5 151 77-248 65-234 (243)
95 3ott_A Two-component system se 99.2 3E-10 1E-14 109.0 17.5 179 79-286 65-253 (758)
96 1ri6_A Putative isomerase YBHE 99.2 2.2E-09 7.5E-14 91.9 20.9 175 87-282 4-197 (343)
97 3scy_A Hypothetical bacterial 99.2 4.8E-09 1.6E-13 91.2 23.3 189 76-283 49-279 (361)
98 1jmx_B Amine dehydrogenase; ox 99.2 2.7E-09 9.1E-14 91.7 20.6 196 78-283 44-315 (349)
99 1l0q_A Surface layer protein; 99.2 6.3E-09 2.2E-13 91.1 23.2 178 78-282 75-263 (391)
100 3das_A Putative oxidoreductase 99.2 2E-09 6.7E-14 93.4 19.0 159 108-284 24-222 (347)
101 3nol_A Glutamine cyclotransfer 99.2 4E-09 1.4E-13 87.2 19.7 183 69-281 35-243 (262)
102 2g8s_A Glucose/sorbosone dehyd 99.2 4E-10 1.4E-14 98.5 14.2 165 107-284 9-218 (353)
103 3nok_A Glutaminyl cyclase; bet 99.2 5.4E-09 1.9E-13 86.5 19.2 173 79-281 57-253 (268)
104 1cru_A Protein (soluble quinop 99.1 1.1E-09 3.8E-14 98.8 16.4 169 107-283 18-247 (454)
105 2p9w_A MAL S 1 allergenic prot 99.1 4.9E-09 1.7E-13 89.5 17.8 184 78-282 64-303 (334)
106 3no2_A Uncharacterized protein 99.1 1E-08 3.5E-13 86.4 19.6 171 87-284 5-185 (276)
107 3mbr_X Glutamine cyclotransfer 99.1 3.6E-08 1.2E-12 80.8 21.0 182 70-281 14-222 (243)
108 3bws_A Protein LP49; two-domai 99.1 2.7E-08 9.4E-13 88.3 21.9 179 77-282 212-420 (433)
109 3c75_H MADH, methylamine dehyd 99.1 2.1E-08 7.3E-13 89.4 20.5 205 68-282 112-389 (426)
110 2ece_A 462AA long hypothetical 99.1 3.5E-08 1.2E-12 87.7 21.3 189 76-281 137-399 (462)
111 2oiz_A Aromatic amine dehydrog 99.0 6.2E-08 2.1E-12 84.7 22.0 75 198-276 286-360 (361)
112 1nir_A Nitrite reductase; hemo 99.0 5.2E-08 1.8E-12 90.0 21.8 177 83-282 144-343 (543)
113 1pby_B Quinohemoprotein amine 99.0 4.8E-08 1.7E-12 83.2 19.9 150 90-250 4-164 (337)
114 1nir_A Nitrite reductase; hemo 98.9 1.2E-07 4.3E-12 87.4 21.2 183 79-282 181-389 (543)
115 3bws_A Protein LP49; two-domai 98.9 1.2E-07 4E-12 84.1 20.0 164 77-249 254-432 (433)
116 3qqz_A Putative uncharacterize 98.9 2.9E-07 9.8E-12 76.3 20.6 160 70-248 63-252 (255)
117 1jmx_B Amine dehydrogenase; ox 98.9 8.6E-08 2.9E-12 82.2 16.7 139 121-281 4-165 (349)
118 1qks_A Cytochrome CD1 nitrite 98.9 4.6E-07 1.6E-11 84.0 22.1 186 77-282 197-408 (567)
119 2mad_H Methylamine dehydrogena 98.9 2.1E-06 7.3E-11 75.3 24.9 204 69-282 61-337 (373)
120 3sjl_D Methylamine dehydrogena 98.8 6.1E-07 2.1E-11 78.8 20.9 205 68-282 72-351 (386)
121 3sre_A PON1, serum paraoxonase 98.8 2.3E-07 8E-12 80.6 17.8 103 69-178 157-285 (355)
122 1gxr_A ESG1, transducin-like e 98.7 9.8E-06 3.3E-10 68.6 24.6 177 78-282 99-284 (337)
123 4a9v_A PHOX; hydrolase, beta-p 98.7 5.4E-08 1.9E-12 88.5 10.7 75 157-237 473-550 (592)
124 1gxr_A ESG1, transducin-like e 98.7 5.4E-06 1.8E-10 70.3 22.6 176 78-282 143-325 (337)
125 2ojh_A Uncharacterized protein 98.7 4E-06 1.4E-10 69.5 21.0 175 77-277 42-230 (297)
126 1mda_H Methylamine dehydrogena 98.7 7.3E-07 2.5E-11 78.1 16.7 204 67-282 58-333 (368)
127 1qks_A Cytochrome CD1 nitrite 98.7 2.1E-06 7.1E-11 79.6 20.4 175 84-282 163-361 (567)
128 4h5i_A Guanine nucleotide-exch 98.7 3.4E-06 1.2E-10 73.6 20.6 186 79-283 136-332 (365)
129 2hqs_A Protein TOLB; TOLB, PAL 98.7 4E-06 1.4E-10 74.5 21.4 174 77-276 179-366 (415)
130 3q6k_A 43.2 kDa salivary prote 98.7 9E-06 3.1E-10 71.0 22.7 190 76-283 86-343 (381)
131 3c75_H MADH, methylamine dehyd 98.7 3.4E-07 1.2E-11 81.6 14.0 106 88-211 85-213 (426)
132 2ymu_A WD-40 repeat protein; u 98.7 3.2E-06 1.1E-10 77.7 21.1 178 77-282 386-568 (577)
133 2ece_A 462AA long hypothetical 98.7 2.3E-06 8E-11 76.0 19.0 192 87-285 95-343 (462)
134 1fwx_A Nitrous oxide reductase 98.7 7.9E-07 2.7E-11 81.6 16.3 143 112-277 273-457 (595)
135 3ow8_A WD repeat-containing pr 98.7 1.9E-05 6.6E-10 67.4 24.4 179 78-283 124-310 (321)
136 3ow8_A WD repeat-containing pr 98.7 3.1E-05 1.1E-09 66.1 25.5 179 77-282 81-267 (321)
137 2ojh_A Uncharacterized protein 98.6 5.9E-06 2E-10 68.4 19.5 160 95-276 20-185 (297)
138 4ery_A WD repeat-containing pr 98.6 3E-05 1E-09 65.4 23.6 180 77-282 24-211 (312)
139 2ymu_A WD-40 repeat protein; u 98.6 1.9E-05 6.4E-10 72.5 23.3 177 77-281 345-526 (577)
140 3o4h_A Acylamino-acid-releasin 98.6 1.4E-06 4.7E-11 80.7 15.2 180 79-284 67-266 (582)
141 2mad_H Methylamine dehydrogena 98.5 2.4E-05 8.3E-10 68.5 22.2 96 165-271 272-369 (373)
142 4e54_B DNA damage-binding prot 98.5 8.6E-06 3E-10 72.5 19.4 153 77-249 120-282 (435)
143 3ei3_B DNA damage-binding prot 98.5 2.2E-05 7.5E-10 68.3 21.6 185 77-282 74-270 (383)
144 1got_B GT-beta; complex (GTP-b 98.5 3.3E-05 1.1E-09 66.4 22.2 175 80-281 147-330 (340)
145 2z3z_A Dipeptidyl aminopeptida 98.5 1.7E-05 6E-10 74.9 21.9 163 97-280 235-417 (706)
146 3q6k_A 43.2 kDa salivary prote 98.5 3E-05 1E-09 67.7 21.2 188 77-283 26-295 (381)
147 1fwx_A Nitrous oxide reductase 98.5 3.4E-06 1.2E-10 77.5 15.9 191 87-282 100-349 (595)
148 1k8k_C P40, ARP2/3 complex 41 98.5 3.6E-05 1.2E-09 66.2 21.7 185 77-284 53-265 (372)
149 2hqs_A Protein TOLB; TOLB, PAL 98.5 3.3E-05 1.1E-09 68.5 21.6 156 97-277 159-324 (415)
150 3zwl_B Eukaryotic translation 98.5 9.8E-05 3.3E-09 63.1 23.9 183 77-281 33-236 (369)
151 2aq5_A Coronin-1A; WD40 repeat 98.5 4E-05 1.4E-09 67.2 21.9 157 77-251 132-301 (402)
152 2aq5_A Coronin-1A; WD40 repeat 98.5 6.7E-05 2.3E-09 65.8 23.0 180 78-279 83-283 (402)
153 1tl2_A L10, protein (tachylect 98.5 1.6E-06 5.4E-11 69.5 10.9 156 66-246 30-207 (236)
154 3sjl_D Methylamine dehydrogena 98.4 1.5E-05 5.2E-10 69.9 17.9 173 90-274 192-384 (386)
155 3fm0_A Protein CIAO1; WDR39,SG 98.4 7.9E-05 2.7E-09 64.1 22.2 182 79-281 19-212 (345)
156 2z3z_A Dipeptidyl aminopeptida 98.4 3.1E-05 1.1E-09 73.2 21.3 171 77-250 82-294 (706)
157 1k8k_C P40, ARP2/3 complex 41 98.4 8.3E-05 2.8E-09 63.9 22.2 150 78-248 10-172 (372)
158 2oiz_A Aromatic amine dehydrog 98.4 2.4E-05 8.2E-10 68.2 18.7 89 88-178 16-127 (361)
159 1r5m_A SIR4-interacting protei 98.4 4.8E-05 1.6E-09 66.4 20.4 184 78-284 110-310 (425)
160 4g56_B MGC81050 protein; prote 98.4 9.8E-06 3.4E-10 70.4 15.7 153 79-250 45-214 (357)
161 2ecf_A Dipeptidyl peptidase IV 98.4 1.2E-05 4.2E-10 76.3 17.7 170 79-250 111-322 (741)
162 3zwl_B Eukaryotic translation 98.4 4.9E-05 1.7E-09 65.0 20.0 181 77-280 75-276 (369)
163 3q7m_A Lipoprotein YFGL, BAMB; 98.4 3.2E-05 1.1E-09 67.3 18.5 168 87-286 188-371 (376)
164 4aez_A CDC20, WD repeat-contai 98.4 0.00028 9.5E-09 61.9 24.8 179 81-282 181-368 (401)
165 4gqb_B Methylosome protein 50; 98.4 4.1E-05 1.4E-09 66.2 18.9 149 79-250 85-247 (344)
166 2vdu_B TRNA (guanine-N(7)-)-me 98.4 6.7E-05 2.3E-09 67.0 20.8 138 121-282 107-259 (450)
167 2vdu_B TRNA (guanine-N(7)-)-me 98.4 0.0001 3.5E-09 65.8 21.8 180 77-282 150-372 (450)
168 2ecf_A Dipeptidyl peptidase IV 98.4 2.3E-05 7.8E-10 74.4 18.3 138 77-237 37-228 (741)
169 4gqb_B Methylosome protein 50; 98.3 1.5E-05 5.3E-10 68.9 15.6 176 79-279 130-316 (344)
170 1erj_A Transcriptional repress 98.3 0.00015 5.1E-09 63.6 22.2 180 78-282 66-275 (393)
171 1got_B GT-beta; complex (GTP-b 98.3 0.00017 5.9E-09 61.8 22.2 182 76-282 55-245 (340)
172 3vl1_A 26S proteasome regulato 98.3 6.5E-05 2.2E-09 65.9 19.9 176 83-284 104-313 (420)
173 3q7m_A Lipoprotein YFGL, BAMB; 98.3 3.9E-05 1.3E-09 66.8 18.0 169 87-286 103-289 (376)
174 1erj_A Transcriptional repress 98.3 0.00018 6.3E-09 63.0 22.2 147 79-249 126-287 (393)
175 4h5i_A Guanine nucleotide-exch 98.3 4.7E-05 1.6E-09 66.3 18.0 152 78-249 178-343 (365)
176 2xzm_R RACK1; ribosome, transl 98.3 0.00046 1.6E-08 59.1 24.1 184 78-284 78-276 (343)
177 1mda_H Methylamine dehydrogena 98.3 8.4E-06 2.9E-10 71.3 13.0 94 165-274 269-367 (368)
178 3b7f_A Glycosyl hydrolase, BNR 98.3 3.6E-05 1.2E-09 67.8 17.2 181 78-282 56-298 (394)
179 1r5m_A SIR4-interacting protei 98.3 0.00011 3.9E-09 64.0 19.7 178 77-282 150-349 (425)
180 4ery_A WD repeat-containing pr 98.3 0.00054 1.8E-08 57.6 23.3 149 77-249 66-223 (312)
181 3vl1_A 26S proteasome regulato 98.2 0.00014 4.6E-09 63.9 19.7 155 77-250 140-323 (420)
182 3frx_A Guanine nucleotide-bind 98.2 0.00076 2.6E-08 57.2 23.2 180 78-285 67-259 (319)
183 3o4h_A Acylamino-acid-releasin 98.2 2E-05 6.7E-10 72.9 14.0 169 79-280 112-298 (582)
184 3frx_A Guanine nucleotide-bind 98.2 0.00054 1.8E-08 58.2 22.1 179 78-282 109-305 (319)
185 3pe7_A Oligogalacturonate lyas 98.2 0.00013 4.5E-09 63.3 18.5 166 82-250 41-226 (388)
186 3dm0_A Maltose-binding peripla 98.2 0.00033 1.1E-08 66.1 22.5 184 78-285 432-624 (694)
187 3dwl_C Actin-related protein 2 98.2 2E-05 6.8E-10 68.3 13.1 187 78-285 57-273 (377)
188 3pe7_A Oligogalacturonate lyas 98.2 3.5E-05 1.2E-09 67.0 14.7 137 97-251 168-331 (388)
189 2ynn_A Coatomer subunit beta'; 98.2 0.00027 9.3E-09 59.5 19.5 150 77-249 14-172 (304)
190 2pm9_A Protein WEB1, protein t 98.2 0.00011 3.8E-09 64.2 17.4 184 78-280 69-280 (416)
191 4g56_B MGC81050 protein; prote 98.2 9.8E-05 3.4E-09 64.0 16.8 178 79-281 142-330 (357)
192 1vyh_C Platelet-activating fac 98.2 0.00042 1.4E-08 61.1 21.1 177 78-281 152-356 (410)
193 2wg3_C Hedgehog-interacting pr 98.2 4.6E-05 1.6E-09 68.6 15.0 164 108-279 6-237 (463)
194 1sq9_A Antiviral protein SKI8; 98.2 0.00023 7.9E-09 61.8 19.2 154 77-249 187-395 (397)
195 1vyh_C Platelet-activating fac 98.2 0.00045 1.5E-08 60.9 21.2 150 77-250 109-266 (410)
196 3i2n_A WD repeat-containing pr 98.2 0.00026 9E-09 60.2 19.0 179 78-276 67-272 (357)
197 1nr0_A Actin interacting prote 98.2 0.00019 6.5E-09 66.8 19.5 183 77-281 19-208 (611)
198 3jrp_A Fusion protein of prote 98.1 0.00087 3E-08 57.4 22.2 184 77-281 12-227 (379)
199 4aez_A CDC20, WD repeat-contai 98.1 0.00087 3E-08 58.6 22.5 176 78-281 136-321 (401)
200 2pbi_B Guanine nucleotide-bind 98.1 0.0014 4.9E-08 56.4 23.5 177 79-282 157-345 (354)
201 3iz6_a 40S ribosomal protein R 98.1 0.0007 2.4E-08 59.0 21.6 152 80-250 209-376 (380)
202 1xfd_A DIP, dipeptidyl aminope 98.1 3E-05 1E-09 73.4 13.7 137 78-236 18-191 (723)
203 2xyi_A Probable histone-bindin 98.1 0.00077 2.6E-08 59.7 22.0 184 77-281 129-340 (430)
204 3mkq_A Coatomer beta'-subunit; 98.1 0.0006 2E-08 65.2 22.6 150 77-250 14-173 (814)
205 1k32_A Tricorn protease; prote 98.1 6.9E-05 2.3E-09 74.3 16.3 176 78-282 297-491 (1045)
206 3lrv_A PRE-mRNA-splicing facto 98.1 0.0013 4.5E-08 56.2 22.6 139 118-281 128-278 (343)
207 3b7f_A Glycosyl hydrolase, BNR 98.1 5.3E-05 1.8E-09 66.7 14.0 179 84-283 19-253 (394)
208 3dw8_B Serine/threonine-protei 98.1 0.00079 2.7E-08 59.4 21.7 187 77-283 29-305 (447)
209 3s25_A Hypothetical 7-bladed b 98.1 0.00013 4.6E-09 61.9 15.9 137 82-250 21-177 (302)
210 3lrv_A PRE-mRNA-splicing facto 98.1 0.00065 2.2E-08 58.1 19.9 149 78-249 127-292 (343)
211 1pgu_A Actin interacting prote 98.1 0.00049 1.7E-08 63.2 20.3 185 77-280 19-224 (615)
212 3dw8_B Serine/threonine-protei 98.1 0.001 3.5E-08 58.6 21.7 155 76-250 177-374 (447)
213 1sq9_A Antiviral protein SKI8; 98.1 0.00046 1.6E-08 59.8 19.1 184 77-282 63-310 (397)
214 3dwl_C Actin-related protein 2 98.1 4.7E-05 1.6E-09 65.9 12.6 150 78-248 13-176 (377)
215 3jrp_A Fusion protein of prote 98.1 0.0011 3.8E-08 56.7 21.2 181 78-280 57-273 (379)
216 1pgu_A Actin interacting prote 98.1 0.00057 1.9E-08 62.8 20.5 179 78-281 408-602 (615)
217 3ei3_B DNA damage-binding prot 98.0 0.00036 1.2E-08 60.5 18.0 180 79-284 166-373 (383)
218 1nr0_A Actin interacting prote 98.0 0.001 3.5E-08 61.9 22.1 171 78-250 149-356 (611)
219 3azo_A Aminopeptidase; POP fam 98.0 0.00037 1.3E-08 65.2 19.2 155 79-250 132-326 (662)
220 1yfq_A Cell cycle arrest prote 98.0 0.00026 9.1E-09 60.0 16.7 179 77-281 12-212 (342)
221 3odt_A Protein DOA1; ubiquitin 98.0 0.00035 1.2E-08 58.3 17.2 146 79-250 145-297 (313)
222 3azo_A Aminopeptidase; POP fam 98.0 0.00023 7.7E-09 66.7 17.4 195 78-281 25-259 (662)
223 2xyi_A Probable histone-bindin 98.0 0.0021 7.2E-08 56.9 22.6 184 77-283 182-399 (430)
224 3amr_A 3-phytase; beta-propell 98.0 0.00075 2.6E-08 58.1 18.6 176 85-281 37-250 (355)
225 3k26_A Polycomb protein EED; W 98.0 0.0024 8.1E-08 54.3 22.0 202 78-283 71-355 (366)
226 2oaj_A Protein SNI1; WD40 repe 98.0 0.00053 1.8E-08 67.0 19.6 149 77-250 18-183 (902)
227 3odt_A Protein DOA1; ubiquitin 98.0 0.0014 4.9E-08 54.4 19.7 177 79-285 107-288 (313)
228 3mkq_A Coatomer beta'-subunit; 98.0 0.0011 3.9E-08 63.2 21.2 179 77-281 56-246 (814)
229 3i2n_A WD repeat-containing pr 98.0 0.00016 5.6E-09 61.6 13.9 147 84-249 176-353 (357)
230 3iz6_a 40S ribosomal protein R 98.0 0.003 1E-07 54.9 22.1 178 81-282 162-363 (380)
231 2pm9_A Protein WEB1, protein t 97.9 0.00082 2.8E-08 58.5 18.4 152 77-250 166-338 (416)
232 3sfz_A APAF-1, apoptotic pepti 97.9 0.00016 5.4E-09 72.7 15.3 181 77-281 1004-1196(1249)
233 3fm0_A Protein CIAO1; WDR39,SG 97.9 0.003 1E-07 54.1 21.4 151 77-248 62-224 (345)
234 3sfz_A APAF-1, apoptotic pepti 97.9 0.0015 5E-08 65.7 22.2 185 77-285 616-820 (1249)
235 2ynn_A Coatomer subunit beta'; 97.9 0.0066 2.2E-07 50.9 22.8 149 79-250 58-218 (304)
236 3mmy_A MRNA export factor; mRN 97.9 0.0027 9.4E-08 53.9 20.3 201 77-282 87-334 (368)
237 3k26_A Polycomb protein EED; W 97.9 0.0029 9.8E-08 53.8 20.2 156 70-249 12-192 (366)
238 2xdw_A Prolyl endopeptidase; a 97.9 0.0018 6.3E-08 61.3 20.5 155 80-250 128-321 (710)
239 2pbi_B Guanine nucleotide-bind 97.9 0.0014 5E-08 56.4 18.2 144 80-245 200-353 (354)
240 2hes_X YDR267CP; beta-propelle 97.9 0.0026 9E-08 54.1 19.6 151 78-249 60-230 (330)
241 1tl2_A L10, protein (tachylect 97.8 0.00062 2.1E-08 54.6 14.1 142 121-286 45-203 (236)
242 4a11_B DNA excision repair pro 97.8 0.0027 9.2E-08 54.9 19.8 150 77-249 44-218 (408)
243 1xfd_A DIP, dipeptidyl aminope 97.8 0.0029 9.8E-08 59.7 21.2 171 78-250 62-290 (723)
244 1z68_A Fibroblast activation p 97.8 0.0002 6.7E-09 67.8 12.9 130 79-236 18-187 (719)
245 4a11_B DNA excision repair pro 97.8 0.0089 3E-07 51.5 22.4 149 77-249 100-276 (408)
246 1yfq_A Cell cycle arrest prote 97.8 0.00079 2.7E-08 57.0 15.2 149 77-250 102-283 (342)
247 3f3f_A Nucleoporin SEH1; struc 97.8 0.011 3.6E-07 49.5 22.1 66 77-143 12-87 (351)
248 3dm0_A Maltose-binding peripla 97.8 0.0037 1.3E-07 58.9 20.9 147 79-250 475-633 (694)
249 3c5m_A Oligogalacturonate lyas 97.7 0.00036 1.2E-08 60.5 12.5 156 79-250 38-226 (396)
250 2xzm_R RACK1; ribosome, transl 97.7 0.017 5.8E-07 49.2 23.1 175 79-281 24-231 (343)
251 2xbg_A YCF48-like protein; pho 97.7 0.0028 9.6E-08 54.2 17.7 181 79-286 124-315 (327)
252 3jro_A Fusion protein of prote 97.7 0.003 1E-07 60.4 19.4 184 78-282 11-226 (753)
253 2j04_A TAU60, YPL007P, hypothe 97.7 0.0079 2.7E-07 55.3 21.1 148 77-250 86-255 (588)
254 2hes_X YDR267CP; beta-propelle 97.7 0.014 4.9E-07 49.4 21.6 150 78-249 16-184 (330)
255 4aow_A Guanine nucleotide-bind 97.7 0.015 5E-07 48.9 21.5 183 77-284 87-277 (340)
256 1k32_A Tricorn protease; prote 97.7 0.0019 6.5E-08 64.0 17.8 170 81-279 249-436 (1045)
257 3zwu_A Alkaline phosphatase PH 97.6 0.00037 1.3E-08 64.4 11.2 74 157-235 473-548 (592)
258 3v7d_B Cell division control p 97.6 0.0096 3.3E-07 52.8 20.3 172 84-285 276-454 (464)
259 2pm7_B Protein transport prote 97.6 0.015 5.3E-07 48.4 20.2 149 79-249 56-238 (297)
260 2xbg_A YCF48-like protein; pho 97.6 0.027 9.2E-07 48.0 22.2 182 78-285 37-226 (327)
261 2hz6_A Endoplasmic reticulum t 97.6 0.00012 4E-09 64.0 6.9 142 83-251 6-151 (369)
262 3s25_A Hypothetical 7-bladed b 97.6 0.004 1.4E-07 52.7 16.0 132 87-250 115-256 (302)
263 2gop_A Trilobed protease; beta 97.6 0.0039 1.3E-07 52.9 16.3 146 78-246 60-250 (347)
264 2oaj_A Protein SNI1; WD40 repe 97.5 0.0093 3.2E-07 58.2 20.2 151 78-249 60-242 (902)
265 3jro_A Fusion protein of prote 97.5 0.0072 2.5E-07 57.7 19.0 182 78-281 55-272 (753)
266 2pm7_B Protein transport prote 97.5 0.03 1E-06 46.5 20.8 152 78-250 11-190 (297)
267 3amr_A 3-phytase; beta-propell 97.5 0.014 4.7E-07 50.3 18.4 137 91-248 90-262 (355)
268 3v7d_B Cell division control p 97.5 0.033 1.1E-06 49.2 21.7 173 81-282 127-329 (464)
269 3vu4_A KMHSV2; beta-propeller 97.5 0.044 1.5E-06 47.0 22.8 201 77-283 20-260 (355)
270 3zwu_A Alkaline phosphatase PH 97.4 0.0023 7.8E-08 59.1 13.9 124 158-285 382-553 (592)
271 4e54_B DNA damage-binding prot 97.4 0.0067 2.3E-07 53.6 16.8 184 80-285 213-422 (435)
272 2bkl_A Prolyl endopeptidase; m 97.4 0.0074 2.5E-07 57.0 17.9 153 80-250 124-305 (695)
273 2j04_A TAU60, YPL007P, hypothe 97.4 0.0025 8.7E-08 58.5 13.9 132 79-236 132-286 (588)
274 4aow_A Guanine nucleotide-bind 97.4 0.042 1.4E-06 46.0 22.1 178 80-282 132-325 (340)
275 3c5m_A Oligogalacturonate lyas 97.4 0.02 6.7E-07 49.3 18.8 138 96-252 167-332 (396)
276 4a5s_A Dipeptidyl peptidase 4 97.4 0.012 4E-07 56.0 18.6 169 81-251 66-296 (740)
277 3mmy_A MRNA export factor; mRN 97.4 0.019 6.4E-07 48.6 18.0 95 76-176 39-146 (368)
278 1yr2_A Prolyl oligopeptidase; 97.3 0.025 8.5E-07 53.8 20.2 153 81-249 167-350 (741)
279 3bg1_A Protein SEC13 homolog; 97.3 0.022 7.7E-07 47.9 17.5 151 78-249 15-198 (316)
280 4gga_A P55CDC, cell division c 97.3 0.063 2.2E-06 47.0 20.9 83 197-282 300-383 (420)
281 4a9v_A PHOX; hydrolase, beta-p 97.3 0.0036 1.2E-07 57.2 12.5 124 158-285 382-553 (592)
282 4a5s_A Dipeptidyl peptidase 4 97.2 0.0095 3.2E-07 56.7 16.1 131 80-235 20-188 (740)
283 2j04_B YDR362CP, TAU91; beta p 97.2 0.0057 2E-07 55.9 13.9 149 79-249 269-428 (524)
284 3bg1_A Protein SEC13 homolog; 97.2 0.039 1.3E-06 46.4 18.3 150 79-249 60-247 (316)
285 3gre_A Serine/threonine-protei 97.2 0.047 1.6E-06 47.8 18.9 154 77-249 64-245 (437)
286 3f3f_A Nucleoporin SEH1; struc 97.2 0.015 5.2E-07 48.5 15.1 98 77-177 111-236 (351)
287 1kb0_A Quinohemoprotein alcoho 97.1 0.019 6.4E-07 54.2 16.3 110 87-211 77-203 (677)
288 3vu4_A KMHSV2; beta-propeller 97.1 0.037 1.3E-06 47.4 17.0 112 116-249 196-336 (355)
289 2ad6_A Methanol dehydrogenase 97.1 0.13 4.3E-06 47.5 21.3 23 87-109 160-189 (571)
290 2j04_B YDR362CP, TAU91; beta p 97.0 0.041 1.4E-06 50.2 17.5 174 79-279 210-413 (524)
291 2ad6_A Methanol dehydrogenase 97.0 0.078 2.7E-06 48.9 19.5 109 87-211 62-189 (571)
292 2oit_A Nucleoporin 214KDA; NH2 96.9 0.04 1.4E-06 48.9 16.3 151 78-249 94-278 (434)
293 1z68_A Fibroblast activation p 96.9 0.0094 3.2E-07 56.2 12.9 164 79-246 62-284 (719)
294 1kb0_A Quinohemoprotein alcoho 96.9 0.12 4.1E-06 48.7 19.9 85 197-284 456-540 (677)
295 1kv9_A Type II quinohemoprotei 96.9 0.13 4.6E-06 48.3 20.2 84 198-284 438-521 (668)
296 3iuj_A Prolyl endopeptidase; h 96.8 0.16 5.6E-06 47.8 20.6 156 80-252 132-317 (693)
297 4ggc_A P55CDC, cell division c 96.8 0.16 5.3E-06 41.9 21.4 82 198-282 221-303 (318)
298 1flg_A Protein (quinoprotein e 96.8 0.21 7E-06 46.2 20.6 84 197-284 465-549 (582)
299 1yiq_A Quinohemoprotein alcoho 96.8 0.1 3.4E-06 49.3 18.7 83 198-284 455-538 (689)
300 2ovr_B FBW7, F-BOX/WD repeat p 96.8 0.14 4.7E-06 45.0 18.7 146 80-249 283-442 (445)
301 3gre_A Serine/threonine-protei 96.7 0.035 1.2E-06 48.7 14.2 150 78-249 113-292 (437)
302 1yiq_A Quinohemoprotein alcoho 96.7 0.11 3.9E-06 48.9 18.3 110 87-211 70-196 (689)
303 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.28 9.6E-06 43.0 19.8 82 197-281 338-425 (445)
304 1kv9_A Type II quinohemoprotei 96.7 0.086 2.9E-06 49.6 16.9 110 87-211 66-191 (668)
305 4gga_A P55CDC, cell division c 96.6 0.3 1E-05 42.5 21.6 144 80-249 109-261 (420)
306 2gop_A Trilobed protease; beta 96.4 0.084 2.9E-06 44.5 14.3 137 96-246 42-206 (347)
307 4gq1_A NUP37; propeller, trans 96.3 0.47 1.6E-05 41.0 20.2 61 223-286 321-382 (393)
308 2w18_A PALB2, fancn, partner a 96.3 0.46 1.6E-05 40.8 19.2 50 197-247 304-355 (356)
309 1flg_A Protein (quinoprotein e 96.3 0.49 1.7E-05 43.6 19.4 58 87-146 68-137 (582)
310 1w6s_A Methanol dehydrogenase 96.2 0.33 1.1E-05 45.0 17.8 110 87-211 62-195 (599)
311 2xdw_A Prolyl endopeptidase; a 96.1 0.23 7.9E-06 46.8 16.4 152 80-251 236-416 (710)
312 1yr2_A Prolyl oligopeptidase; 96.0 0.27 9.1E-06 46.6 16.5 149 80-250 271-442 (741)
313 2bkl_A Prolyl endopeptidase; m 96.0 0.083 2.8E-06 49.7 12.8 149 81-250 231-398 (695)
314 1p22_A F-BOX/WD-repeat protein 95.9 0.77 2.6E-05 40.1 19.6 142 80-249 177-325 (435)
315 1w6s_A Methanol dehydrogenase 95.9 1.1 3.6E-05 41.6 21.3 85 196-284 451-536 (599)
316 1p22_A F-BOX/WD-repeat protein 95.5 1.2 4E-05 38.9 20.6 136 85-250 140-286 (435)
317 1sqj_A OXG-RCBH, oligoxylogluc 95.2 1.4 4.8E-05 42.2 18.1 150 77-244 15-196 (789)
318 4ggc_A P55CDC, cell division c 94.9 1.2 4.3E-05 36.3 21.2 144 80-249 29-181 (318)
319 2oit_A Nucleoporin 214KDA; NH2 94.9 1.9 6.4E-05 38.0 18.7 160 78-249 151-333 (434)
320 2w18_A PALB2, fancn, partner a 94.2 2.4 8.3E-05 36.3 22.2 183 87-282 144-345 (356)
321 3iuj_A Prolyl endopeptidase; h 94.2 0.73 2.5E-05 43.3 13.3 98 138-250 104-218 (693)
322 2xe4_A Oligopeptidase B; hydro 93.9 2.7 9.1E-05 39.9 16.7 146 80-249 177-354 (751)
323 3a0f_A Xyloglucanase; beta-pro 93.7 5 0.00017 38.2 18.4 149 77-244 21-208 (763)
324 2cn3_A Xyloglucanase, beta-1,4 92.7 6.9 0.00024 37.0 20.0 100 78-177 24-151 (737)
325 3a0f_A Xyloglucanase; beta-pro 91.7 9.3 0.00032 36.3 17.4 183 80-287 547-756 (763)
326 2be1_A Serine/threonine-protei 91.3 0.93 3.2E-05 38.7 8.7 59 87-146 10-77 (339)
327 1k3i_A Galactose oxidase precu 91.2 4.2 0.00014 37.8 14.0 112 121-250 190-324 (656)
328 1k3i_A Galactose oxidase precu 90.8 10 0.00035 35.2 18.0 120 82-211 248-382 (656)
329 2xe4_A Oligopeptidase B; hydro 89.1 1.9 6.7E-05 40.9 9.9 75 161-250 175-257 (751)
330 3sbq_A Nitrous-oxide reductase 88.8 1.2 4.3E-05 40.6 7.7 84 199-282 299-396 (638)
331 4gq1_A NUP37; propeller, trans 88.7 4.4 0.00015 34.7 11.2 72 161-249 138-218 (393)
332 1xip_A Nucleoporin NUP159; bet 88.3 12 0.00041 32.5 15.0 141 77-251 38-193 (388)
333 1xip_A Nucleoporin NUP159; bet 87.7 13 0.00045 32.2 19.7 126 78-234 89-230 (388)
334 2zwa_A Leucine carboxyl methyl 86.7 21 0.00071 33.5 19.8 147 86-251 396-579 (695)
335 2cn3_A Xyloglucanase, beta-1,4 86.6 9.2 0.00032 36.2 12.8 118 117-244 24-159 (737)
336 1sqj_A OXG-RCBH, oligoxylogluc 86.6 15 0.00052 35.0 14.4 115 116-244 15-147 (789)
337 2vpj_A Kelch-like protein 12; 85.1 14 0.00048 30.0 19.3 144 87-250 62-232 (301)
338 2uvk_A YJHT; unknown function, 83.2 19 0.00065 30.1 18.1 156 87-248 19-225 (357)
339 3ii7_A Kelch-like protein 7; p 82.0 19 0.00066 29.3 18.7 148 87-250 55-226 (306)
340 3ii7_A Kelch-like protein 7; p 82.0 19 0.00066 29.2 19.4 146 87-251 101-274 (306)
341 4asc_A Kelch repeat and BTB do 81.0 22 0.00074 29.2 14.0 145 87-250 98-278 (315)
342 2woz_A Kelch repeat and BTB do 75.3 32 0.0011 28.1 16.2 143 87-250 109-288 (318)
343 2zwa_A Leucine carboxyl methyl 75.1 54 0.0019 30.6 15.2 151 87-250 451-636 (695)
344 2vpj_A Kelch-like protein 12; 71.5 38 0.0013 27.3 20.2 145 87-250 112-279 (301)
345 3f6k_A Sortilin; protein sorti 71.3 25 0.00086 32.9 10.0 96 128-235 56-156 (685)
346 2xn4_A Kelch-like protein 2; s 69.0 44 0.0015 26.9 19.1 144 87-250 108-277 (302)
347 3sbq_A Nitrous-oxide reductase 68.5 69 0.0024 29.4 11.7 66 217-283 377-454 (638)
348 2hz6_A Endoplasmic reticulum t 67.4 9.8 0.00034 32.4 6.1 60 169-248 8-67 (369)
349 1zgk_A Kelch-like ECH-associat 62.3 61 0.0021 26.2 17.9 144 87-250 70-241 (308)
350 2woz_A Kelch repeat and BTB do 61.9 63 0.0022 26.3 14.3 134 99-250 80-232 (318)
351 3f6k_A Sortilin; protein sorti 56.4 1.3E+02 0.0045 28.1 13.2 59 91-150 59-133 (685)
352 2xn4_A Kelch-like protein 2; s 53.6 85 0.0029 25.2 19.7 146 87-250 61-230 (302)
353 1zgk_A Kelch-like ECH-associat 52.6 91 0.0031 25.2 18.7 143 87-250 121-288 (308)
354 2be1_A Serine/threonine-protei 52.0 31 0.0011 29.2 6.3 23 127-149 10-34 (339)
355 2uvk_A YJHT; unknown function, 45.7 1.1E+02 0.0038 25.2 9.0 69 164-250 13-96 (357)
356 3hx6_A Type 4 fimbrial biogene 27.4 3.6E+02 0.012 24.6 12.3 53 197-250 222-285 (570)
357 4asc_A Kelch repeat and BTB do 24.7 2.7E+02 0.0092 22.3 19.2 132 99-250 69-222 (315)
358 1wlp_A Cytochrome B-245 light 23.2 32 0.0011 16.8 0.9 8 3-10 8-15 (26)
359 1ymm_C MBP peptide, HLA class 20.8 53 0.0018 16.0 1.4 12 1-12 12-23 (26)
360 3s9j_A Member of DUF4221 famil 20.7 1.9E+02 0.0065 24.6 6.1 61 226-286 36-103 (369)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.95 E-value=9.6e-27 Score=201.76 Aligned_cols=207 Identities=28% Similarity=0.515 Sum_probs=163.4
Q ss_pred CCcCCcceEEEccCCC-EEEEecCCeEEEEecCC-ceEEeee--------------------ecCcCccCeEEcC-CCcE
Q 022967 74 GILNGPEDVCVDRNGV-LYTATRDGWIKRLHKNG-TWENWKL--------------------IGGDTLLGITTTQ-ENEI 130 (289)
Q Consensus 74 ~~~~~p~~l~~d~~g~-l~v~~~~g~i~~~~~~g-~~~~~~~--------------------~~~~p~~gl~~d~-~g~l 130 (289)
+.+..||++++|++|+ +|++..+++|++++.++ ++..+.. ..+.|. ||++++ +|+|
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTTEE
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCCcE
Confidence 4478999999999998 88988899999999554 5655542 124688 999996 8999
Q ss_pred EEEeCCCceEEEeC-CC-eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC
Q 022967 131 LVCDADKGLLKVTE-EG-VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (289)
Q Consensus 131 ~v~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 207 (289)
||++..+++++++. ++ ++.+.....+.++..++++++++ +|+|||++....++.......+.+....++|+++|+++
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 99998788999994 45 66665544555667899999999 99999999764333333222333444568899999988
Q ss_pred CeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 208 NETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 208 ~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
++.+.+...+..|+|+++++|++.|||+++.+++|++|++++...+..+.+.. +++ |++|++|.+|+|||++..
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEE
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecC
Confidence 88877777788999999999999999999999999999998765555555553 556 999999999999999875
No 2
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.93 E-value=3.2e-24 Score=184.42 Aligned_cols=212 Identities=20% Similarity=0.261 Sum_probs=164.1
Q ss_pred ceeEeccCCcCCcceEEEccCCC-EE-EEecCCeEEEEecCCceEEeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGV-LY-TATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT 143 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~-l~-v~~~~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~ 143 (289)
.++++..+ ...+|+.+++++|+ || ++..+++|++++.+|+...+......+. +++++++|+||+++.. .+|++++
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEEEC
Confidence 45677777 57899999999887 55 6668899999998888777777677788 9999999999999876 5799999
Q ss_pred CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCcccccc--ccceecCCCEEEEEeCCCCeEEEeeCCCCCc
Q 022967 144 EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGL--DLLEAKPHGKLLKYDPSLNETSILLDSLFFA 220 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~--~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p 220 (289)
.+| ++.+.....+..++.+++++++++|++||+|.. ||...... ........+.|+++|+++++++.+. ++..|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p 190 (305)
T 3dr2_A 114 ADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP 190 (305)
T ss_dssp TTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE
T ss_pred CCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC
Confidence 668 777766555666778999999999999998754 22211000 0001123468999999878877776 77889
Q ss_pred ceEEEecCCCEEEEEeCCC-----CeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 221 NGVALSKDEDYLVVCETFK-----FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 221 ~gl~~~~d~~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
+|+++++|++.||++++.. ++|++|++++..+...+.+.....+.|++|++|.+|+||+++.+
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~ 258 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT 258 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC
Confidence 9999999999999999873 79999999865444445555444578999999999999999843
No 3
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.93 E-value=5.6e-24 Score=185.43 Aligned_cols=209 Identities=21% Similarity=0.340 Sum_probs=155.8
Q ss_pred ceeEeccCCcCCcceEEEccCCCEEEEe-------------cCCeEEEEecC---CceEEeeeec-------CcCccCeE
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGVLYTAT-------------RDGWIKRLHKN---GTWENWKLIG-------GDTLLGIT 123 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~l~v~~-------------~~g~i~~~~~~---g~~~~~~~~~-------~~p~~gl~ 123 (289)
....++ +...+||+|+++++|.+|+++ ..|+|++++.+ ++.+.+.... .+|+ ||.
T Consensus 41 ~C~~i~-~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-Gi~ 118 (355)
T 3sre_A 41 NCNLVK-GIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-GIS 118 (355)
T ss_dssp CEEECT-TCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-EEE
T ss_pred CCEEeC-CCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-eeE
Confidence 444553 435799999999999999886 68999999943 4555544322 4799 999
Q ss_pred EcC--CC--cEEEEeCCC-----ceEEEeCCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCcccc-ccccc
Q 022967 124 TTQ--EN--EILVCDADK-----GLLKVTEEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNW-GLDLL 192 (289)
Q Consensus 124 ~d~--~g--~l~v~~~~~-----~i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~-~~~~~ 192 (289)
+.. +| +|||+++.. ++++++.++ ...+.....+.+++.+|+++++++|++|+++... +..... ..+..
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~ 197 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMH 197 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHHHHH
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccchhh
Confidence 854 45 599998763 388888655 5555566677788999999999999999998641 111100 01122
Q ss_pred eecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC-CCcceeeeeccCCCCCCceee
Q 022967 193 EAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE-SKEQTEIFVENLPGGPDNIKL 271 (289)
Q Consensus 193 ~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~p~~i~~ 271 (289)
+....++||++++. +.+.+.+++..|||++++||+++|||+|+..++|++|+++++ ++...+.+ ..++.|||+++
T Consensus 198 ~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~v 273 (355)
T 3sre_A 198 LGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISV 273 (355)
T ss_dssp TTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEE
T ss_pred ccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEE
Confidence 23456899999984 677788899999999999999999999999999999999743 44444555 45689999999
Q ss_pred CC-CCCEEEEEe
Q 022967 272 AP-DGSFWIAIL 282 (289)
Q Consensus 272 d~-~G~lwv~~~ 282 (289)
|. +|++|+++.
T Consensus 274 D~e~G~lwva~~ 285 (355)
T 3sre_A 274 DPVTGDLWVGCH 285 (355)
T ss_dssp CTTTCCEEEEEE
T ss_pred eCCCCcEEEEec
Confidence 99 599999875
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.91 E-value=2.2e-22 Score=171.83 Aligned_cols=211 Identities=18% Similarity=0.270 Sum_probs=157.6
Q ss_pred eeEeccCCcCCcceEEEccCCC-EE-EEecCCeEEEEecCCceEEeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-
Q 022967 68 VTRLGEGILNGPEDVCVDRNGV-LY-TATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT- 143 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~g~-l~-v~~~~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~- 143 (289)
++.+..+ ...||+++++++|+ || ++..+++|++++.++....+......|. +++++++|+||+++.. .+|++++
T Consensus 20 ~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEEcC
Confidence 3455555 67899999999998 55 6668899999996555666665566788 9999999999999875 6799999
Q ss_pred CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCcccccc--ccceecCCCEEEEEeCCCCeEEEeeCCCCCc
Q 022967 144 EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGL--DLLEAKPHGKLLKYDPSLNETSILLDSLFFA 220 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~--~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p 220 (289)
.+| ++.+.....+.....+++++++++|++|+++.. ++...... ........++|++++++ ++...+......|
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~--~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPT--YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECS--HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCc--cccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 578 766654444455667899999999999998753 11100000 00011124689999998 7777777888899
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEecC-CCC-cceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 221 NGVALSKDEDYLVVCETFKFRCLKYWLKG-ESK-EQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 221 ~gl~~~~d~~~l~v~~~~~~~i~~~~~~~-~~~-~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
++++++||++.+ ++++..++|++|++++ ..+ .....+ ....+.|+++++|++|++||++ .+++
T Consensus 175 ~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~~v 239 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GDGV 239 (296)
T ss_dssp EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TTEE
T ss_pred ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CCeE
Confidence 999999999977 9999999999999862 233 333444 4445789999999999999999 5554
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.89 E-value=9.9e-22 Score=168.28 Aligned_cols=200 Identities=13% Similarity=0.140 Sum_probs=147.8
Q ss_pred cCCcceEEEcc-CCCEEEE-ecCCeEEEEecC-CceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEE
Q 022967 76 LNGPEDVCVDR-NGVLYTA-TRDGWIKRLHKN-GTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVL 150 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~-~~~g~i~~~~~~-g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~ 150 (289)
..-+|+.++++ ++.||+. ..+++|++++.+ ++...+ .....+. +++++++|+||++. ..+|++++ .+| ++.+
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVS-SVALRQSGGYVATI-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEE-EEEEBTTSSEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceE-EEEECCCCCEEEEE-CCeEEEEECCCCcEEEE
Confidence 56789999998 6778854 478999999954 444433 3346677 99999999999998 47899999 667 7766
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED 230 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~ 230 (289)
.....+.+...+++++++++|++|+++...... ........+.|++++++ ++...+...+..|+|++++||++
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSC
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCC
Confidence 554334445678999999999999987531100 00011234789999987 56666667778899999999999
Q ss_pred EEEEEeCCCCeEEEEEec--CCCCcceeeeec--cCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 231 YLVVCETFKFRCLKYWLK--GESKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~--~~~~~~~~~~~~--~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
.||++++..++|++|+++ +..+...+.+.. ...+.|+++++|++|+|||+++.++
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC
Confidence 999999999999999985 223333344432 2236799999999999999998653
No 6
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.88 E-value=2.3e-20 Score=160.49 Aligned_cols=189 Identities=17% Similarity=0.255 Sum_probs=144.8
Q ss_pred eeEeccCCcCCcceEEEccCCCEEEEe-cCCeEEEEecCCceEEeeeecCcCccCeEEcCCCcEEEEeCC-Cc--eEEEe
Q 022967 68 VTRLGEGILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KG--LLKVT 143 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~g~l~v~~-~~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~--i~~~~ 143 (289)
+..++.+ ..||++++|++|+||+++ .+++|++++.+|+...+....+.|. +|+++++|+|||++.. ++ +++++
T Consensus 25 ~~~~p~~--~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 25 ITSFPVN--TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEECTT--CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred eEeCCCC--CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEEEc
Confidence 3444443 679999999999999877 7799999998887766655567899 9999999999999854 23 88988
Q ss_pred -CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe--------
Q 022967 144 -EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-------- 213 (289)
Q Consensus 144 -~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-------- 213 (289)
++| ++.+... . ....++++++.+++.+|+++.. .+.||++|+++++.+.+
T Consensus 102 ~~~g~~~~~~~~-~--~~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 102 KSDGTVETLLTL-P--DAIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp CTTSCEEEEEEC-T--TCSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSC
T ss_pred CCCCeEEEEEeC-C--CccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCcccc
Confidence 778 7665543 2 2345778888888889999853 47899999876543322
Q ss_pred ---eCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC-CCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 214 ---LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 214 ---~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
...+..|+|+ ++|+++||++++.+++|++|++++ .++...+.+.. . ..|++|++|.+|++||+...
T Consensus 162 ~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~ 231 (306)
T 2p4o_A 162 SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHI 231 (306)
T ss_dssp SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBT
T ss_pred ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCC
Confidence 1345688998 888999999999999999999975 33444444442 2 47999999999999999875
No 7
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.87 E-value=1.8e-20 Score=160.53 Aligned_cols=211 Identities=22% Similarity=0.367 Sum_probs=150.6
Q ss_pred eeEeccCCcCCcceEEEccCCCEEEE--------ecCCeEEEEe-cCCceEEeee-----ecCcCccCeEEcCC-CcEEE
Q 022967 68 VTRLGEGILNGPEDVCVDRNGVLYTA--------TRDGWIKRLH-KNGTWENWKL-----IGGDTLLGITTTQE-NEILV 132 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~g~l~v~--------~~~g~i~~~~-~~g~~~~~~~-----~~~~p~~gl~~d~~-g~l~v 132 (289)
.+.+..+ +..|++++++++|+||++ ..+++|++++ .+|+...+.. ....+. +++++++ |+||+
T Consensus 10 ~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v 87 (314)
T 1pjx_A 10 FTKVTED-IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFV 87 (314)
T ss_dssp CEEEECC-CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEE
T ss_pred Hhhhhcc-CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEE
Confidence 3445555 789999999999999987 4678999999 5777766543 335688 9999999 99999
Q ss_pred EeCCCceEEEeCCC-eEEE-EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE
Q 022967 133 CDADKGLLKVTEEG-VTVL-ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET 210 (289)
Q Consensus 133 ~~~~~~i~~~~~~g-~~~~-~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~ 210 (289)
++...+|++++.+| ++.+ .....+.....+++++++++|++|+++........++ ........++|++++++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY--TRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC--CBTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc--cccccCCCCeEEEECCC-CCE
Confidence 99767899999448 6554 3322233445789999999999999985310000000 00011223689999988 666
Q ss_pred EEeeCCCCCcceEEEe----cCCCEEEEEeCCCCeEEEEEecC-CCCcceeeeec--cCC-CCCCceeeCCCCCEEEEEe
Q 022967 211 SILLDSLFFANGVALS----KDEDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVE--NLP-GGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 211 ~~~~~~~~~p~gl~~~----~d~~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~--~~~-~~p~~i~~d~~G~lwv~~~ 282 (289)
..+......|++++++ ++++.+|+++...++|++|+.++ ..+...+.+.. ... +.|+++++|++|++|+++.
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 6665666789999999 99988999999889999999862 22222223221 111 5689999999999999986
Q ss_pred C
Q 022967 283 Q 283 (289)
Q Consensus 283 ~ 283 (289)
.
T Consensus 245 ~ 245 (314)
T 1pjx_A 245 G 245 (314)
T ss_dssp T
T ss_pred C
Confidence 4
No 8
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.82 E-value=2.6e-18 Score=150.54 Aligned_cols=184 Identities=13% Similarity=0.145 Sum_probs=139.9
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCc-eEEee-eecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCCC--e
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWK-LIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG--V 147 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~-~~~~~-~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~g--~ 147 (289)
+..|.++++|+ ++.||+++ .+++|++++.+|. .+.+. .....|. ||++|. +|+||+++.. +.|.+++.+| .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 67899999996 78899666 7789999997664 33332 3346788 999995 6789999976 5688888666 4
Q ss_pred EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEE
Q 022967 148 TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVAL 225 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~ 225 (289)
+.+.. ..+..|++|+++| +|.||+++.. ..++|+++++++...+.+. .++..|+||++
T Consensus 151 ~~l~~----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~ 210 (349)
T 3v64_C 151 KVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTI 210 (349)
T ss_dssp EEEEC----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCEEEEEE
T ss_pred EEEEe----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCcceEEE
Confidence 44432 2346799999998 6789999864 1378999999866555543 56889999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
+++++.|||+|...++|++++++|.. ...+.......|++|+++ +|++|++.+..
T Consensus 211 d~~~~~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 211 DYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEecCCC
Confidence 99999999999999999999998742 223332223689999996 47899998754
No 9
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.82 E-value=2.1e-18 Score=149.61 Aligned_cols=203 Identities=17% Similarity=0.213 Sum_probs=144.9
Q ss_pred eeEeccCCcCCcceEEEccC-CCEE-EEecCCeEEEEecC-CceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-
Q 022967 68 VTRLGEGILNGPEDVCVDRN-GVLY-TATRDGWIKRLHKN-GTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT- 143 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~-g~l~-v~~~~g~i~~~~~~-g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~- 143 (289)
++.+.......+|+++++++ +.+| ++..+++|++++.+ ++...+. ....+. +++++++|++|++. ..+|++++
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~-~i~~~~dg~l~v~~-~~gl~~~d~ 116 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGS-ALAKISDSKQLIAS-DDGLFLRDT 116 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEE-EEEEEETTEEEEEE-TTEEEEEET
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcce-EEEEeCCCeEEEEE-CCCEEEEEC
Confidence 44555544566899999985 6777 55577899999954 4444443 234566 89999999999998 47799999
Q ss_pred CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcce
Q 022967 144 EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANG 222 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~g 222 (289)
.+| ++.+.....+.....+++++++++|++|+++.... +....++|++++ + ++...+......+++
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~-~-g~~~~~~~~~~~~~~ 183 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA-K-GKVTKLFADISIPNS 183 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE-T-TEEEEEEEEESSEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe-C-CcEEEeeCCCcccCC
Confidence 667 66654432222335688999999999999874210 011346899999 4 777666556667899
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEec--CC-CCcceeeeec--cCCCCCCceeeCCCCCEEEEEeC-ccc
Q 022967 223 VALSKDEDYLVVCETFKFRCLKYWLK--GE-SKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAILQ-VFI 286 (289)
Q Consensus 223 l~~~~d~~~l~v~~~~~~~i~~~~~~--~~-~~~~~~~~~~--~~~~~p~~i~~d~~G~lwv~~~~-g~i 286 (289)
+++++|++.||++++..++|++|+.+ +. .+...+.+.. ...+.|+++++|.+|++|+++.. +++
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v 253 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAV 253 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEE
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEE
Confidence 99999999999999988999999986 33 3333333321 22357999999999999999975 444
No 10
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.81 E-value=1.6e-18 Score=155.98 Aligned_cols=186 Identities=15% Similarity=0.135 Sum_probs=140.1
Q ss_pred CcCCcceEEEccC---CCEEEEecCCeEEEEec-CCceEEeeeecCcCccCeEEcCCCcEEEEeCC-----CceEEEeCC
Q 022967 75 ILNGPEDVCVDRN---GVLYTATRDGWIKRLHK-NGTWENWKLIGGDTLLGITTTQENEILVCDAD-----KGLLKVTEE 145 (289)
Q Consensus 75 ~~~~p~~l~~d~~---g~l~v~~~~g~i~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-----~~i~~~~~~ 145 (289)
.+..|++|++|++ |+||+++..++|++++. +|.+..+......|. +|+++++|+|||++.. .+++.++.+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 4788999999984 99998886589999995 788877766667799 9999999999999863 247777743
Q ss_pred C-e---EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE-EEee--CCC
Q 022967 146 G-V---TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-SILL--DSL 217 (289)
Q Consensus 146 g-~---~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~--~~~ 217 (289)
+ . ..+. .+..|+++++++ +|+|||++.. .++|++++++++.. +.+. ...
T Consensus 216 ~~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~ 272 (433)
T 4hw6_A 216 SGFTERLSLC------NARGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTK 272 (433)
T ss_dssp GTTCCEEEEE------ECSSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCC
T ss_pred CCeecccccc------ccCCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCC
Confidence 3 2 1221 356899999999 8999999864 47899999986765 3332 223
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEEecCC--CCcceeeeecc--------------CCCCCCceee---------C
Q 022967 218 FFANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQTEIFVEN--------------LPGGPDNIKL---------A 272 (289)
Q Consensus 218 ~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~--------------~~~~p~~i~~---------d 272 (289)
..+.++++++++++|||++..+++|++++.++. .+.....+... .-..|.++++ |
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 456689999999999999999999999998742 22211222211 1135888999 9
Q ss_pred CCCCEEEEEeCc
Q 022967 273 PDGSFWIAILQV 284 (289)
Q Consensus 273 ~~G~lwv~~~~g 284 (289)
.+|+|||+....
T Consensus 353 ~~g~lyvaD~~n 364 (433)
T 4hw6_A 353 DEYDFYFCDRDS 364 (433)
T ss_dssp CCEEEEEEETTT
T ss_pred CCCcEEEEECCC
Confidence 999999998753
No 11
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.81 E-value=3.2e-18 Score=151.94 Aligned_cols=184 Identities=13% Similarity=0.134 Sum_probs=138.9
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCc-eEEee-eecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCCC--e
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWK-LIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG--V 147 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~-~~~~~-~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~g--~ 147 (289)
+..|.++++|+ ++.||+++ .+++|++++.+|. .+.+. .....|. ||++|. .++||+++.. ++|.+++.+| .
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 67899999996 78899666 7789999997765 33333 3345788 999995 6789999976 4688888666 4
Q ss_pred EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcceEEE
Q 022967 148 TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVAL 225 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~gl~~ 225 (289)
+.+.. ..+..|++|+++| +|.||+++.. ..++|+++++++...+.+ ..++..|+||++
T Consensus 194 ~~l~~----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlav 253 (386)
T 3v65_B 194 KVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTI 253 (386)
T ss_dssp EEEEC----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EEeec----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEE
Confidence 44432 2346799999997 5789999854 136899999986555544 357889999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
+++++.|||+|+..++|++++++|.. ...+.......|++|++++ +++|++.+..
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~~-~~ly~td~~~ 308 (386)
T 3v65_B 254 DYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVFE-DSLYWTDWHT 308 (386)
T ss_dssp EGGGTEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEET-TEEEEEETTT
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEEC-CEEEEeeCCC
Confidence 99899999999999999999988742 2333332235899999965 6888887653
No 12
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=4e-18 Score=147.42 Aligned_cols=194 Identities=21% Similarity=0.305 Sum_probs=140.8
Q ss_pred cCCcceEEEccCCCEEEE-ecCCeEEEEec-CCceEEee-eecCcCccCeEEcCCCcEEEEeCCC-----ceEEEe-CCC
Q 022967 76 LNGPEDVCVDRNGVLYTA-TRDGWIKRLHK-NGTWENWK-LIGGDTLLGITTTQENEILVCDADK-----GLLKVT-EEG 146 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~-~~~g~i~~~~~-~g~~~~~~-~~~~~p~~gl~~d~~g~l~v~~~~~-----~i~~~~-~~g 146 (289)
...|++++++++|+||+. ..+++|++++. +++...+. .....+. +++++++|++|+++... +|++++ ..+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 567999999999999964 57789999994 56665544 3345677 99999999999998654 799999 445
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEE
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVAL 225 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~ 225 (289)
.+.+.... .....+++++++++|++|+++.... .....+.|+++++++++...+......++++++
T Consensus 123 ~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 123 NLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIAL 189 (333)
T ss_dssp SCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE
T ss_pred EEEEEEccC--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEE
Confidence 55333211 1234688999999999999875310 011246899999987777666555667899999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEecC--CCCcce--eeeec-cCCCCCCceeeCCCCCEEEEEeC
Q 022967 226 SKDEDYLVVCETFKFRCLKYWLKG--ESKEQT--EIFVE-NLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~~i~~~~~~~--~~~~~~--~~~~~-~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
++|++.||+++...++|++|+.+. ...... ..+.. .....|+++++|++|++|+++..
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~ 252 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG 252 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC
Confidence 999999999998889999999853 222111 11111 11137899999999999999865
No 13
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=3.4e-18 Score=144.82 Aligned_cols=185 Identities=14% Similarity=0.207 Sum_probs=137.9
Q ss_pred CCcCCcceEEEccCCCEEEEe-cCCeEEEEecCCceEE-eeee------cCcCccCeEE-cCCCcEEEEeC--CCceEEE
Q 022967 74 GILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWEN-WKLI------GGDTLLGITT-TQENEILVCDA--DKGLLKV 142 (289)
Q Consensus 74 ~~~~~p~~l~~d~~g~l~v~~-~~g~i~~~~~~g~~~~-~~~~------~~~p~~gl~~-d~~g~l~v~~~--~~~i~~~ 142 (289)
+.+..|.+++++++|++|+++ .+++|.+++.+|+... +... ...|. ++++ +++|+||+++. ..+|+++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 447889999999999999875 6789999997776433 2211 13577 9999 58899999985 4678899
Q ss_pred eCCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--CCCC
Q 022967 143 TEEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLF 218 (289)
Q Consensus 143 ~~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~ 218 (289)
+.+| +..+. ......+.+|+++++|++|+++.. .++|+++++++.....+. ..+.
T Consensus 106 d~~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 106 NQYGQFVRKFG----ATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLE 164 (286)
T ss_dssp CTTSCEEEEEC----TTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCS
T ss_pred CCCCcEEEEec----CccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccC
Confidence 8666 33331 123457889999999999999753 368999998755554443 3466
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeec-cCCCCCCceeeCCCCCEEEEEeCc
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE-NLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
.|++++++++++ +|+++...++|++|+.++..+ ..+.. .....|.+|++|.+|++||++...
T Consensus 165 ~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~---~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 165 FPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQYL---RQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp SEEEEEECSSSE-EEEEEGGGTEEEEEETTCCEE---EEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred CcEEEEECCCCC-EEEEECCCCEEEEEcCCCCEE---EEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 899999999987 999999889999999765422 12211 112468999999999999999653
No 14
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.81 E-value=2.1e-18 Score=151.31 Aligned_cols=211 Identities=15% Similarity=0.189 Sum_probs=143.3
Q ss_pred ceeEeccCCcCCcceEEEccCCCEEEEecCCeEEEEecCCceEEeee------ecCcCccCeEEcCC----CcEEEEeCC
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKL------IGGDTLLGITTTQE----NEILVCDAD 136 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~l~v~~~~g~i~~~~~~g~~~~~~~------~~~~p~~gl~~d~~----g~l~v~~~~ 136 (289)
.++.+..+ +..|++|+++++|+||+++..|+|++++.+|+ +.+.. ....++ ||+++++ |.|||+...
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEEec
Confidence 45666666 79999999999999999998899999987777 44432 235688 9999986 899999753
Q ss_pred --------CceEEEe-CCC------eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEE
Q 022967 137 --------KGLLKVT-EEG------VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLL 201 (289)
Q Consensus 137 --------~~i~~~~-~~g------~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~ 201 (289)
.+|++++ .++ .+++....+....+.+++|+++|||+|||+.+.. +......+ .....++|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~--~~~~~~~d--~~~~~G~I~ 172 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDA--ADPRLAQD--LSSLAGKIL 172 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCT--TCGGGGTC--TTCCSSEEE
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCC--CCCccccC--CCCCCeEEE
Confidence 5788888 322 2333333333445678999999999999997642 11111111 112357999
Q ss_pred EEeCCCC--------eEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEe--cCCCCcc------------eeeee
Q 022967 202 KYDPSLN--------ETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWL--KGESKEQ------------TEIFV 259 (289)
Q Consensus 202 ~~~~~~~--------~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~--~~~~~~~------------~~~~~ 259 (289)
|+++++. ..++++.++++|+|++++++.+.||++|.+.++...++. .+...+. .....
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEe
Confidence 9999854 356788899999999999955559999998765333332 2221110 00111
Q ss_pred c--cCCCCCCceee-------CCCCCEEEEEeCc
Q 022967 260 E--NLPGGPDNIKL-------APDGSFWIAILQV 284 (289)
Q Consensus 260 ~--~~~~~p~~i~~-------d~~G~lwv~~~~g 284 (289)
. .....|.++++ +.+|++|++...+
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~ 286 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRGWLLIACLRG 286 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTT
T ss_pred ecCCCCcCCcceEEECCCCCcccCCcEEEEEcCC
Confidence 0 11245888998 4678999998754
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.81 E-value=7e-18 Score=145.76 Aligned_cols=184 Identities=11% Similarity=0.090 Sum_probs=136.7
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCC----c-eEEee-eecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCC
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNG----T-WENWK-LIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEE 145 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g----~-~~~~~-~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~ 145 (289)
+..|+++++|+ ++.||+++ .+++|++++.+| . .+.+. .....|. ||++|. +++||+++.. +.|.+++.+
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 68899999997 67899766 678999999665 2 23322 2345788 999995 6789999876 568888866
Q ss_pred C--eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcc
Q 022967 146 G--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFAN 221 (289)
Q Consensus 146 g--~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~ 221 (289)
| .+.+... .+..|++|+++| +|.||+++.. ..++|+++++++...+.+. ..+..|+
T Consensus 108 g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 108 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp SSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCceEEEEEC----CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 6 4444431 245789999998 6789999853 1368999999865555443 4688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeecc--CCCCCCceeeCCCCCEEEEEeCc
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
||+++++++.|||+|+..++|++++.+|.. .+.+... ....|.+|++|. |++|++.+..
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~ 228 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 228 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEEC-CEEEEEECCC
Confidence 999999999999999999999999998742 2333322 235799999985 7899888653
No 16
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=2.9e-18 Score=150.32 Aligned_cols=210 Identities=15% Similarity=0.144 Sum_probs=141.4
Q ss_pred ceeEeccCCcCCcceEEEccCCCEEEEecCCeEEEEecCCceEEeee------ecCcCccCeEEcCC----CcEEEEeCC
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKL------IGGDTLLGITTTQE----NEILVCDAD 136 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~l~v~~~~g~i~~~~~~g~~~~~~~------~~~~p~~gl~~d~~----g~l~v~~~~ 136 (289)
.++.+..+ +..|++|+++++|+||+++..|+|++++ +|+.+.+.. ....|+ ||+++++ +.|||++..
T Consensus 22 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp CEEEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEec
Confidence 45666666 7899999999999999999889999998 776554332 235688 9999987 789999753
Q ss_pred ------CceEEEe-CCC-e---EEEEeccC--CccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEE
Q 022967 137 ------KGLLKVT-EEG-V---TVLASHVN--GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (289)
Q Consensus 137 ------~~i~~~~-~~g-~---~~~~~~~~--~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 203 (289)
.+|++++ .++ + +.+....+ ....+.+.+|++++||.|||+++.. +.....++ .....++|+|+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~--~~~~~~~d--~~~~~g~I~ri 174 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEV--YERELAQD--LASLGGKILRL 174 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCT--TCGGGGGC--TTCSSSEEEEE
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCC--CCCccccC--CCCCceEEEEE
Confidence 5689998 433 2 23333333 3345678999999999999997642 11111111 11235799999
Q ss_pred eCCC-------------CeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCe--------EEEEEecCCCCcc--------
Q 022967 204 DPSL-------------NETSILLDSLFFANGVALSKDEDYLVVCETFKFR--------CLKYWLKGESKEQ-------- 254 (289)
Q Consensus 204 ~~~~-------------~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~--------i~~~~~~~~~~~~-------- 254 (289)
++++ ...++++.++++|+|++++++++.||++|.+.++ |.++. .+...+.
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~-~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV-PGGNYGWPRVVGRGN 253 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC-TTCBCCTTTCCSCCC
T ss_pred cCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec-cCCcCCCCcccCCCC
Confidence 9985 2456677889999999999955559999998776 44443 2221110
Q ss_pred ----eeeeec-cCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 255 ----TEIFVE-NLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 255 ----~~~~~~-~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
...... .....|.++++ .+|++|++...++
T Consensus 254 ~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~ 288 (352)
T 2ism_A 254 DPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQ 288 (352)
T ss_dssp CTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTT
T ss_pred CCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCC
Confidence 001110 11135888998 4689999987543
No 17
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=1e-17 Score=140.34 Aligned_cols=184 Identities=14% Similarity=0.234 Sum_probs=135.8
Q ss_pred cCCcceEEEccCCCEEEEecCCeEEEEecCCceEE-eee-ecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC-eEEEE
Q 022967 76 LNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWEN-WKL-IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVLA 151 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~~g~i~~~~~~g~~~~-~~~-~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g-~~~~~ 151 (289)
+..|.+|+++++|+||+++.+++|++++.++.... +.. ....|. +++++++|++|+++.. .+|++++... .....
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE-GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE-EEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred cCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc-ceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 56899999999999998887889999997665332 222 225688 9999999999999865 5688887333 22221
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcceEEEecCCC
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDED 230 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~gl~~~~d~~ 230 (289)
. ...+..+.+|+++++|++|+++.. .++|++++++++..... ...+..|.+++++++|.
T Consensus 145 ~---~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 145 P---FTGLNDPDGVAVDNSGNVYVTDTD-----------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT 204 (270)
T ss_dssp C---CCSCCSCCCEEECTTCCEEEEEGG-----------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC
T ss_pred c---cccCCCceeEEEeCCCCEEEEECC-----------------CCEEEEEecCCCceEeecccCCCCceEEEECCCCC
Confidence 1 122457899999999999999753 36899999986655443 23457899999999985
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
+|+++...++|++|+.++.... .........|.++++|.+|++|++....
T Consensus 205 -l~v~~~~~~~v~~~~~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 205 -VYVTEHNTNQVVKLLAGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp -EEEEETTTSCEEEECTTCSCCE---ECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred -EEEEECCCCcEEEEcCCCCcce---eeccCCCCCceeEEECCCCCEEEEECCC
Confidence 9999998899999987764221 1111111468999999999999998754
No 18
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=7.6e-18 Score=146.13 Aligned_cols=156 Identities=14% Similarity=0.134 Sum_probs=116.5
Q ss_pred cCCcceEEEccCCCEEEEecCC-------------------------eEEEEec-CCceEEeee--ecCcCccCeEEcCC
Q 022967 76 LNGPEDVCVDRNGVLYTATRDG-------------------------WIKRLHK-NGTWENWKL--IGGDTLLGITTTQE 127 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~~g-------------------------~i~~~~~-~g~~~~~~~--~~~~p~~gl~~d~~ 127 (289)
+..|.+|++|++|++|+++..+ .|++++. +|++..... ....|. +++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEECCC
Confidence 6789999999999999877443 6999985 577654322 124688 9999999
Q ss_pred CcEEEEeCC-CceEEEeCCC-e---EEEEec----cCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCC
Q 022967 128 NEILVCDAD-KGLLKVTEEG-V---TVLASH----VNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPH 197 (289)
Q Consensus 128 g~l~v~~~~-~~i~~~~~~g-~---~~~~~~----~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
|+||+++.. +.|++++.+| . ..+... .....+..|.+|++++ +|+|||++.. ..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~----------------~~ 165 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY----------------CN 165 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------SC
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------CC
Confidence 999999976 5688898655 2 222111 0123456799999999 8999999851 13
Q ss_pred CEEEEEeCCCCeEEEee----------CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEec
Q 022967 198 GKLLKYDPSLNETSILL----------DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 198 g~i~~~~~~~~~~~~~~----------~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
++|.++++++.....+. ..+..|.+++++++++.|||++..+++|.+|+.+
T Consensus 166 ~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 166 SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 68999998754444432 1245699999999977799999999999999987
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.80 E-value=1e-17 Score=140.90 Aligned_cols=184 Identities=15% Similarity=0.112 Sum_probs=137.1
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCc-eEEeee-ecCcCccCeEEcCC-CcEEEEeCC-CceEEEeCCC--e
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWKL-IGGDTLLGITTTQE-NEILVCDAD-KGLLKVTEEG--V 147 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~-~~~~~~-~~~~p~~gl~~d~~-g~l~v~~~~-~~i~~~~~~g--~ 147 (289)
..+|+++++|+ ++.||+++ .+++|++++.+|. ...+.. ....|. +|++|++ ++||+++.. +.|.+++.+| .
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 46799999998 67899776 6789999997664 333332 235788 9999974 689999976 5688888656 4
Q ss_pred EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEE
Q 022967 148 TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVAL 225 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~ 225 (289)
+.+.. ..+..|+++++++ +|+||+++... ..+.|++++.++...+.+. ..+..|+++++
T Consensus 114 ~~~~~----~~~~~P~~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~ 174 (267)
T 1npe_A 114 RVLFD----TGLVNPRGIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTNRRILAQDNLGLPNGLTF 174 (267)
T ss_dssp EEEEC----SSCSSEEEEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCCCEEEECTTCSCEEEEEE
T ss_pred EEEEE----CCCCCccEEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCCcEEEEECCCCCCcEEEE
Confidence 44432 1245789999999 57899998531 1368999998865544443 56788999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
+++++.|||++...++|++++.++.. ...+... ...|.+|++| ++++|++....
T Consensus 175 d~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~-~~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 175 DAFSSQLCWVDAGTHRAECLNPAQPG---RRKVLEG-LQYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTEEE---EEEEEEC-CCSEEEEEEE-TTEEEEEETTT
T ss_pred cCCCCEEEEEECCCCEEEEEecCCCc---eEEEecC-CCCceEEEEe-CCEEEEEECCC
Confidence 99999999999999999999987532 2233332 3579999998 58999998753
No 20
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.79 E-value=8e-18 Score=145.48 Aligned_cols=183 Identities=16% Similarity=0.136 Sum_probs=137.3
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCce---EEeeeecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCCC--
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTW---ENWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG-- 146 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~---~~~~~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~g-- 146 (289)
+..|.++++|+ ++.||.++ .+++|++++.+|.. ..+......|. |+++|. +|+||+++.. ++|.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 46688889987 68898665 77899999976642 23334456788 999995 7789999976 5688888666
Q ss_pred eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcceEE
Q 022967 147 VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVA 224 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~gl~ 224 (289)
.+.+.. ..+..|++|+++| +|.||+++.. ..++|+++++++...+.+ ..++..|+||+
T Consensus 113 ~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pngla 172 (318)
T 3sov_A 113 RKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLT 172 (318)
T ss_dssp CEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEE
Confidence 454432 2346799999998 5799999843 236899999986554444 46788999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
++++++.|||+|+..++|++++++|.. .+.+.......|+++++|.+ .+|++.+.
T Consensus 173 vd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~glav~~~-~lywtd~~ 227 (318)
T 3sov_A 173 LDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYWTDWS 227 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSCCSCEEEEEEETT-EEEEEETT
T ss_pred EeccCCEEEEEECCCCEEEEEcCCCCc---eEEEecCCCCCceEEEEeCC-EEEEEecC
Confidence 999999999999999999999998742 33444323368999999965 56666654
No 21
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=1.4e-17 Score=139.48 Aligned_cols=180 Identities=18% Similarity=0.290 Sum_probs=131.0
Q ss_pred CcceEEEccCCCEEE-Ee-cCCeEEEEecCCce-EEeee-ecCcCccCeEEcCCCcEEEEeCCCceEEEeCCC--eEEEE
Q 022967 78 GPEDVCVDRNGVLYT-AT-RDGWIKRLHKNGTW-ENWKL-IGGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLA 151 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v-~~-~~g~i~~~~~~g~~-~~~~~-~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~~~g--~~~~~ 151 (289)
.|+++++|++|+||+ ++ .+++|.+++.++.. ..+.. ....|. +|+++++|+||+++..++|++++.++ ...+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeeee
Confidence 899999999999998 85 67889999854432 22222 235688 99999999999998756799999555 33221
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcceEEEecCCC
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDED 230 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~gl~~~~d~~ 230 (289)
...+..+.+|+++++|++|+++.. .+.|++++..+...... ...+..|++++++++++
T Consensus 104 ----~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 104 ----FDGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp ----CCSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred ----cCCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC
Confidence 122356889999999999999753 36899997654433322 23456899999999998
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
+|+++...++|++|+.++..... .....+ ..|.+|++|.+|++|+++..
T Consensus 163 -l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~-~~p~~i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 163 -VYVTDTDNNRVVKLEAESNNQVV--LPFTDI-TAPWGIAVDEAGTVYVTEHN 211 (270)
T ss_dssp -EEEEEGGGTEEEEECTTTCCEEE--CCCSSC-CSEEEEEECTTCCEEEEETT
T ss_pred -EEEEECCCCEEEEEecCCCceEe--ecccCC-CCceEEEECCCCCEEEEECC
Confidence 99999888999999977543211 111111 56899999999999999864
No 22
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.79 E-value=4.2e-17 Score=141.50 Aligned_cols=167 Identities=17% Similarity=0.240 Sum_probs=119.6
Q ss_pred cceeEeccCCcCCcceEEEccCCCEEEEec-CCeEEEEec-CCceEEee-------eecCcCccCeEEcC----CCcEEE
Q 022967 66 QSVTRLGEGILNGPEDVCVDRNGVLYTATR-DGWIKRLHK-NGTWENWK-------LIGGDTLLGITTTQ----ENEILV 132 (289)
Q Consensus 66 ~~~~~~~~~~~~~p~~l~~d~~g~l~v~~~-~g~i~~~~~-~g~~~~~~-------~~~~~p~~gl~~d~----~g~l~v 132 (289)
..++.+.++ +..|++|+++++|+||++.. .|+|++++. +|+.+.+. ...+.++ ||++++ ++.||+
T Consensus 22 ~~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~lYv 99 (347)
T 3das_A 22 KVLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHMVYA 99 (347)
T ss_dssp EEEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCEEEE
T ss_pred ceeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCEEEE
Confidence 356777777 89999999999999999997 899999984 46654432 2235678 999997 488999
Q ss_pred EeC---CCceEEEe-CC-----C----eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCE
Q 022967 133 CDA---DKGLLKVT-EE-----G----VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGK 199 (289)
Q Consensus 133 ~~~---~~~i~~~~-~~-----g----~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~ 199 (289)
+.. .++|.|+. .. . .+.+....+....|....|++++||.|||+.+.. +.....++. ....|+
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~--~~~~~~qd~--~~~~G~ 175 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES--GDTGLSQDR--KSLGGK 175 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT--TCGGGTTCT--TCSTTC
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC--CCCccccCC--CCCCCE
Confidence 742 35788886 32 1 3444444444456778899999999999997642 111111111 123588
Q ss_pred EEEEeCCCC--------eEEEeeCCCCCcceEEEecCCCEEEEEeCCC
Q 022967 200 LLKYDPSLN--------ETSILLDSLFFANGVALSKDEDYLVVCETFK 239 (289)
Q Consensus 200 i~~~~~~~~--------~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~ 239 (289)
|+|+++++. ..++++.++++|+|++|+++++ ||++|.+.
T Consensus 176 IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~ 222 (347)
T 3das_A 176 ILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQ 222 (347)
T ss_dssp EEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCS
T ss_pred EEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCC
Confidence 999999865 3467888999999999999766 99998754
No 23
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=1.9e-17 Score=140.27 Aligned_cols=185 Identities=13% Similarity=0.188 Sum_probs=136.0
Q ss_pred cCCcceEEE-ccCCCEEEEec--CCeEEEEecCCceEEeee--ecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC--e
Q 022967 76 LNGPEDVCV-DRNGVLYTATR--DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG--V 147 (289)
Q Consensus 76 ~~~p~~l~~-d~~g~l~v~~~--~g~i~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g--~ 147 (289)
+..|.++++ +++|+||+++. +++|.+++.+|+...... ....|. +++++++|++|+++.. ++|++++.+| +
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 154 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPR-GVTVDNKGRIIVVECKVMRVIIFDQNGNVL 154 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCce-EEEEeCCCCEEEEECCCCEEEEEcCCCCEE
Confidence 467999999 57999998873 789999998786543222 224678 9999999999999865 5689999666 4
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC--CCCcceEEE
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVAL 225 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~--~~~p~gl~~ 225 (289)
..+... ..+..|++|+++++|++|+++.. .++|+++++++.....+... +..|.++++
T Consensus 155 ~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~ 214 (286)
T 1q7f_A 155 HKFGCS---KHLEFPNGVVVNDKQEIFISDNR-----------------AHCVKVFNYEGQYLRQIGGEGITNYPIGVGI 214 (286)
T ss_dssp EEEECT---TTCSSEEEEEECSSSEEEEEEGG-----------------GTEEEEEETTCCEEEEESCTTTSCSEEEEEE
T ss_pred EEeCCC---CccCCcEEEEECCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEEccCCccCCCcEEEE
Confidence 333211 23457899999999999999753 36899999976555544322 468999999
Q ss_pred ecCCCEEEEEeCCCC-eEEEEEecCCCCcceeeeeccC-CCCCCceeeCCCCCEEEEEeCcc
Q 022967 226 SKDEDYLVVCETFKF-RCLKYWLKGESKEQTEIFVENL-PGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
+++|+ +|+++..++ +|.+|+.++..+. .+.... ...|.+++++++|++||+..++.
T Consensus 215 d~~G~-l~v~~~~~~~~i~~~~~~g~~~~---~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~ 272 (286)
T 1q7f_A 215 NSNGE-ILIADNHNNFNLTIFTQDGQLIS---ALESKVKHAQCFDVALMDDGSVVLASKDYR 272 (286)
T ss_dssp CTTCC-EEEEECSSSCEEEEECTTSCEEE---EEEESSCCSCEEEEEEETTTEEEEEETTTE
T ss_pred CCCCC-EEEEeCCCCEEEEEECCCCCEEE---EEcccCCCCcceeEEECCCCcEEEECCCCe
Confidence 99987 999998876 9999986654222 222121 13578999999999999975443
No 24
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.78 E-value=4.1e-17 Score=153.06 Aligned_cols=185 Identities=14% Similarity=0.100 Sum_probs=144.9
Q ss_pred CCcCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCc-eEEeee-ecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCCC-
Q 022967 74 GILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWKL-IGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG- 146 (289)
Q Consensus 74 ~~~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~-~~~~~~-~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~g- 146 (289)
..+..|.+|++|+ ++.||+++ .+++|++++.+|. .+.+.. ....|. |||+|. .++||+++.. ++|.+++.+|
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 3467899999998 78899666 7799999997774 333333 335799 999995 5689999976 4688888666
Q ss_pred -eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEE
Q 022967 147 -VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~ 224 (289)
.+.+.. ..+..|++|+++| +|.|||+|.. ..++|+++++++...+.+..++..|+||+
T Consensus 113 ~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~Gla 172 (628)
T 4a0p_A 113 HRQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANGLT 172 (628)
T ss_dssp TCEEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEEEE
T ss_pred cEEEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcceEE
Confidence 455542 2356799999998 7899999843 14689999999877777778899999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
++++++.|||+|...++|++++++|... +.+...+ ..|.+|++++ +++|++.+..
T Consensus 173 lD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l-~~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 173 IDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDL-PHPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECC-SCEEEEEEET-TEEEEEETTT
T ss_pred EccccCEEEEEECCCCEEEEEcCCCCce---EEeeccC-CCceEEEEEC-CEEEEecCCC
Confidence 9999999999999999999999987533 3444333 5799999997 7899998743
No 25
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.78 E-value=7.8e-17 Score=136.54 Aligned_cols=184 Identities=17% Similarity=0.230 Sum_probs=139.1
Q ss_pred cCCcceEEEccCCCEEEEec-CCeEEEEecCCceEEeeee--cCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC-eEEE
Q 022967 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKLI--GGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~-~g~i~~~~~~g~~~~~~~~--~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g-~~~~ 150 (289)
...|.++++|++|++|+++. +++|++++.+|+...+... ...|. +++++++|+||+++.. .+|++++.+| +..+
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~ 181 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPA-FITLGSDNALWFTENQNNSIGRITNTGKLEEY 181 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSSEEEEETTTTEEEEECTTCCEEEE
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCce-eEEECCCCCEEEEecCCCeEEEECCCCcEEEe
Confidence 36799999999999998874 6899999977877655322 35678 9999999999999864 5799999766 5544
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--CCCCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~~p~gl~~~~d 228 (289)
... .....+.+++++++|+||+++.. .+.|++++++ ++...+. .....|.+++++++
T Consensus 182 ~~~---~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 240 (300)
T 2qc5_A 182 PLP---TNAAAPVGITSGNDGALWFVEIM-----------------GNKIGRITTT-GEISEYDIPTPNARPHAITAGKN 240 (300)
T ss_dssp ECS---STTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECTT-CCEEEEECSSTTCCEEEEEECST
T ss_pred eCC---CCCCCcceEEECCCCCEEEEccC-----------------CCEEEEEcCC-CcEEEEECCCCCCCceEEEECCC
Confidence 221 22356889999999999999753 3679999985 5554442 34677999999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeee-eccCCCCCCceeeCCCCCEEEEEeCcccc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIF-VENLPGGPDNIKLAPDGSFWIAILQVFIS 287 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~lwv~~~~g~i~ 287 (289)
|+ ||+++...++|.+|+.++. . ..+ .......|.++++|.+|++|+++.+ ++.
T Consensus 241 g~-l~v~~~~~~~i~~~~~~g~-~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~ 294 (300)
T 2qc5_A 241 SE-IWFTEWGANQIGRITNDNT-I---QEYQLQTENAEPHGITFGKDGSVWFALKC-KIG 294 (300)
T ss_dssp TC-EEEEETTTTEEEEECTTSC-E---EEEECCSTTCCCCCEEECTTSCEEEECSS-EEE
T ss_pred CC-EEEeccCCCeEEEECCCCc-E---EEEECCccCCccceeEeCCCCCEEEEccC-ceE
Confidence 88 9999988899999987432 2 122 1112256899999999999999974 653
No 26
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.78 E-value=8.9e-17 Score=143.70 Aligned_cols=183 Identities=10% Similarity=0.095 Sum_probs=132.6
Q ss_pred CcCCcceEEEccCCCEEEEe-cCCeEEEEecC-CceEEeeeecCcCccCeEEcCCCc-EEEEeCCC--ceEEEe-CCC-e
Q 022967 75 ILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKN-GTWENWKLIGGDTLLGITTTQENE-ILVCDADK--GLLKVT-EEG-V 147 (289)
Q Consensus 75 ~~~~p~~l~~d~~g~l~v~~-~~g~i~~~~~~-g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~--~i~~~~-~~g-~ 147 (289)
.+..|.+|++|++|+||+++ .+++|++++.+ +....+......+. ++++++|+ ||+++... .+++++ ..+ .
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 37889999999999999776 56899999965 56666554433343 88998885 78887643 799999 444 3
Q ss_pred -EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe----eCC--CCC
Q 022967 148 -TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL----LDS--LFF 219 (289)
Q Consensus 148 -~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~----~~~--~~~ 219 (289)
..+. .........++++++++ +|.||+++. .+.|+++|++++....+ ..+ ...
T Consensus 207 ~~~~g-~~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 207 PTRIG-QLGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEE-ECCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eEEee-eccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 3331 11111346789999999 789999763 36899999987766555 222 223
Q ss_pred cc-eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccC--------------CCCCCceeeCCCCCEEEEEe
Q 022967 220 AN-GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL--------------PGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 220 p~-gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------~~~p~~i~~d~~G~lwv~~~ 282 (289)
|. +++++|+++.||+++..+++|++|+.++. ...+.... -..|.+|++|++|+|||+..
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 45 99999987789999999999999987764 11111110 14699999999999999987
No 27
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.78 E-value=9.4e-17 Score=136.04 Aligned_cols=182 Identities=14% Similarity=0.209 Sum_probs=138.3
Q ss_pred cCCcceEEEccCCCEEEEe-cCCeEEEEecCCceEEeeee--cCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC-eEEE
Q 022967 76 LNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWENWKLI--GGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~-~~g~i~~~~~~g~~~~~~~~--~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g-~~~~ 150 (289)
...|++|++|++|+||+++ .+++|.+++.++++..+... ...|. +++++++|++|+++.. ++|++++.+| ...+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeEEe
Confidence 5789999999999999887 57899999966776654332 24678 9999999999999864 5699999558 6544
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--CCCCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~~p~gl~~~~d 228 (289)
.... ....+.+++++++|++|+++.. .+.|++++++ ++...+. .....|++++++++
T Consensus 98 ~~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 98 PLPQ---PDSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ECSS---TTCCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCCC---CCCCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 3211 1256889999999999999753 3689999998 6655442 24668999999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeee-ccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
++ +|+++...++|++|+.++. .. .+. ......|.++++|.+|++|+++...
T Consensus 157 g~-l~v~~~~~~~i~~~~~~g~-~~---~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITNTGK-LE---EYPLPTNAAAPVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTCC-EE---EEECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred CC-EEEEecCCCeEEEECCCCc-EE---EeeCCCCCCCcceEEECCCCCEEEEccCC
Confidence 98 9999988899999987432 21 221 1222468999999999999998654
No 28
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.3e-17 Score=148.35 Aligned_cols=186 Identities=13% Similarity=0.127 Sum_probs=137.9
Q ss_pred CcCCcceEEEcc--CCCEEEEecCCeEEEEecCC-ceEEeeeecCcCccCeEEcCCCc-EEEEeCCC-----ceEEEeCC
Q 022967 75 ILNGPEDVCVDR--NGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQENE-ILVCDADK-----GLLKVTEE 145 (289)
Q Consensus 75 ~~~~p~~l~~d~--~g~l~v~~~~g~i~~~~~~g-~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~-----~i~~~~~~ 145 (289)
.+..|.+|++|+ +|+||+.+..++|++++.++ .+..+......|. +|+++++|+ ||+++... .++.++.+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 378999999995 58999887668999999655 5666666667799 999999998 99998632 36666655
Q ss_pred C-eE---EEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--CCCC
Q 022967 146 G-VT---VLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLF 218 (289)
Q Consensus 146 g-~~---~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~ 218 (289)
| +. .+. .+..|.++++++ +|+|||++.. .++|++++++++....+. ....
T Consensus 214 g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~ 270 (430)
T 3tc9_A 214 SGFKVITELT------KGQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSG 270 (430)
T ss_dssp GTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSS
T ss_pred Cceeeeeeec------cCCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCC
Confidence 5 32 222 246799999999 8999999864 478999999877663332 2346
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecCC--CCcceeeeecc--------------CCCCCC-ceee--------CC
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQTEIFVEN--------------LPGGPD-NIKL--------AP 273 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~--------------~~~~p~-~i~~--------d~ 273 (289)
.|+++++++++++|||++..+++|++++.++. .+.....+... .-..|. ++++ |.
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 79999999999999999999999999998863 11111111110 013577 7888 56
Q ss_pred CCCEEEEEeCc
Q 022967 274 DGSFWIAILQV 284 (289)
Q Consensus 274 ~G~lwv~~~~g 284 (289)
+|+|||+....
T Consensus 351 ~g~lyvaD~~n 361 (430)
T 3tc9_A 351 EYDFYFCDREN 361 (430)
T ss_dssp CEEEEEEEGGG
T ss_pred CCeEEEEECCC
Confidence 79999998753
No 29
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.77 E-value=4.8e-17 Score=144.99 Aligned_cols=183 Identities=11% Similarity=0.097 Sum_probs=135.1
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCC-----ceEEee-eecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCC
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNG-----TWENWK-LIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEE 145 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g-----~~~~~~-~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~ 145 (289)
+..|.+|++|+ ++.||+++ .+++|++++.+| ....+. .....|. ||++|. .++||+++.. +.|.+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 67899999997 78899666 678999998665 223332 2456788 999996 6789999976 468888866
Q ss_pred C--eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcc
Q 022967 146 G--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFAN 221 (289)
Q Consensus 146 g--~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~ 221 (289)
| .+.+.. ..+..|++|+++| +|.||+++.. ..++|++++.++...+.+ ..++..|+
T Consensus 190 g~~~~~l~~----~~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 190 GVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TCSEEEEEE----CSSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEEe----CCCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceE
Confidence 6 444443 1345799999998 6789999853 136799999986555444 45688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeecc--CCCCCCceeeCCCCCEEEEEeC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
||+++++++.|||+|+..++|++++++|.. ...+... .-..|.+|+++.+ ++|++.+.
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~~-~lywtd~~ 309 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDII 309 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEETT-EEEEEESS
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeCC-EEEEecCC
Confidence 999999999999999999999999998743 2233322 1257899999764 66666654
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=9.9e-17 Score=135.86 Aligned_cols=184 Identities=13% Similarity=0.208 Sum_probs=138.3
Q ss_pred cCCcceEEEccCCCEEEEec-CCeEEEEecCCceEEeee--ecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC-eEEE
Q 022967 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~-~g~i~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g-~~~~ 150 (289)
...|.++++|++|++|+++. +++|++++.+|+...+.. ....|. +++++++|+||+++.. .++++++.+| ...+
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEEEe
Confidence 46799999999999998875 688999997787765542 234678 9999999999999854 5799999766 5544
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe--eCCCCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL--LDSLFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~--~~~~~~p~gl~~~~d 228 (289)
... .....+.+++++++|++|+++.. .+.|+++|+ +++...+ ......|.+++++++
T Consensus 135 ~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 135 ELP---NKGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred cCC---CCCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC
Confidence 321 12346889999999999998753 368999999 5666554 234667899999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeee-eccCCCCCCceeeCCCCCEEEEEeC-ccc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIF-VENLPGGPDNIKLAPDGSFWIAILQ-VFI 286 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~lwv~~~~-g~i 286 (289)
++ +|+++...++|++|+.++ .. ..+ .......|.+|++|++|++|+++.. +++
T Consensus 194 g~-l~v~~~~~~~i~~~~~~g-~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 248 (299)
T 2z2n_A 194 DA-LWFVEIIGNKIGRITTSG-EI---TEFKIPTPNARPHAITAGAGIDLWFTEWGANKI 248 (299)
T ss_dssp SS-EEEEETTTTEEEEECTTC-CE---EEEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred CC-EEEEccCCceEEEECCCC-cE---EEEECCCCCCCceeEEECCCCCEEEeccCCceE
Confidence 88 999998889999998733 22 122 1112256889999999999999854 444
No 31
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=1.7e-16 Score=134.34 Aligned_cols=181 Identities=14% Similarity=0.256 Sum_probs=136.7
Q ss_pred cCCcceEEEccCCCEEEEec-CCeEEEEecCCceEEeee--ecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC-eEEE
Q 022967 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~-~g~i~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g-~~~~ 150 (289)
...|.++++|++|++|+++. +++|.+++.++++..+.. ....|. +++++++|++|+++.. .++++++.+| ++.+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 57899999999999998885 688999996677765542 235678 9999999999999864 5699999657 6554
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--CCCCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~~p~gl~~~~d 228 (289)
... .....+.+|+++++|++|+++.. .+.|+++|++ ++...+. .....|++++++++
T Consensus 93 ~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 93 TLP---NPDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITDD-GKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTT
T ss_pred eCC---CcCCCceeeEECCCCCEEEEecC-----------------CceEEEECCC-CCEEEecCCCCCCCCceEEEcCC
Confidence 321 12346889999999999999753 3689999994 5555442 34567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeee-eccCCCCCCceeeCCCCCEEEEEeC
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIF-VENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
++ +|+++...++|++|+.++ .. ..+ .......|.++++|.+|++|+++..
T Consensus 152 g~-l~v~~~~~~~i~~~~~~g-~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITESG-DI---TEFKIPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp SC-EEEEETTTTEEEEECTTC-CE---EEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred CC-EEEEeCCCCEEEEEcCCC-cE---EEeeCCCCCCcceeEEECCCCCEEEEccC
Confidence 86 999988889999998732 22 122 1122246889999999999999864
No 32
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=9.8e-17 Score=139.98 Aligned_cols=192 Identities=14% Similarity=0.159 Sum_probs=132.5
Q ss_pred CCcceEEEccCCCEEEEec---CC--eEEEEecCCceEEeee-------ecCcCccCeEEcCCCcEEEEeCC------Cc
Q 022967 77 NGPEDVCVDRNGVLYTATR---DG--WIKRLHKNGTWENWKL-------IGGDTLLGITTTQENEILVCDAD------KG 138 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~---~g--~i~~~~~~g~~~~~~~-------~~~~p~~gl~~d~~g~l~v~~~~------~~ 138 (289)
..|++|+++++|++|++.. ++ +|++++ +|+...+.. ....|. ++++|++|+|||+|.+ .+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEee-EEEEcCCCcEEEEcCCCCcCCCCe
Confidence 5899999999999998752 34 788888 776654421 124688 9999999999999964 57
Q ss_pred eEEEe-CCC-e-EEEEec-cCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe
Q 022967 139 LLKVT-EEG-V-TVLASH-VNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL 213 (289)
Q Consensus 139 i~~~~-~~g-~-~~~~~~-~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 213 (289)
|+++| .+| + +.+... ........++++++++ +|.+|+++.+.. ..+.|+++|+++++...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKAALIRVDLQTGLAARV 160 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGCEEEEEETTTCCEEEE
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCCeEEEEECCCCCEEEE
Confidence 99999 667 3 333221 1122334679999997 478999986310 135677777765554443
Q ss_pred eCC------------------------------CCCcceEEEecCCCEEEEEeCCCCeEEEEEec---CCCCcceeee--
Q 022967 214 LDS------------------------------LFFANGVALSKDEDYLVVCETFKFRCLKYWLK---GESKEQTEIF-- 258 (289)
Q Consensus 214 ~~~------------------------------~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~---~~~~~~~~~~-- 258 (289)
..+ ...++||++++|++.||++++..++|++++.+ ...+...+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK 240 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc
Confidence 211 12479999999999999999988899999853 1111111100
Q ss_pred --eccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 259 --VENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 259 --~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
.....+.|+++++|++|++|++....
T Consensus 241 ~~~~g~~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 241 IERYSEKPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp CEEEEECCSCSCEEECTTCCEEEEEGGG
T ss_pred eEecccCCCCceEEECCCCCEEEEccCC
Confidence 00112479999999999999998754
No 33
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.75 E-value=2.5e-16 Score=147.62 Aligned_cols=185 Identities=16% Similarity=0.126 Sum_probs=140.5
Q ss_pred CcCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCc-eEEee-eecCcCccCeEEcC-CCcEEEEeCCC-ceEEEeCCC--
Q 022967 75 ILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWK-LIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG-- 146 (289)
Q Consensus 75 ~~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~-~~~~~-~~~~~p~~gl~~d~-~g~l~v~~~~~-~i~~~~~~g-- 146 (289)
.+..|.+|++|+ +|.||+++ ..++|++++.+|. .+.+. .....|. |||+|. .++||++|... .|.+++.+|
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 367789999998 78999776 6789999997774 33333 3346899 999995 67899999764 577777666
Q ss_pred eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcceEE
Q 022967 147 VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVA 224 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~gl~ 224 (289)
.+.+.. ..+..|++|+++| +|.|||+|.. ..++|++.+.++.....+ ...+..|+||+
T Consensus 426 ~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~l~~P~Gla 485 (619)
T 3s94_A 426 RKILIS----EDLEEPRAIVLDPMVGYMYWTDWG----------------EIPKIERAALDGSDRVVLVNTSLGWPNGLA 485 (619)
T ss_dssp CEEEEC----TTCCSEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEEE----CCCCCeeeEEEEcCCCcEEEecCC----------------CCCEEEEEccCCCccEEEEeCCCCCCeeeE
Confidence 455542 2467899999999 4999999854 136899999986555444 34689999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
++++++.|||+|+..++|.+++++|... +.+.......|.+|+++++ +||++++..
T Consensus 486 lD~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glav~~~-~ly~tD~~~ 541 (619)
T 3s94_A 486 LDYDEGKIYWGDAKTDKIEVMNTDGTGR---RVLVEDKIPHIFGFTLLGD-YVYWTDWQR 541 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCC---EEEEECCCCSSCCEEEETT-EEEEECTTS
T ss_pred EcccCCEEEEEECCCCEEEEEecCCCce---EEEeccCCCCcEEEEEECC-EEEEeecCC
Confidence 9998889999999999999999987532 2232222357999999875 899988754
No 34
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.75 E-value=9.6e-17 Score=150.42 Aligned_cols=183 Identities=17% Similarity=0.164 Sum_probs=134.2
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCce--EEe-eeecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCCC--
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTW--ENW-KLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG-- 146 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~--~~~-~~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~g-- 146 (289)
+..|.+|++|+ ++.||+++ .+++|.+++.+|.. +.+ ......|. ||++|. .++||+++.. +.|.+++.+|
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 67899999997 78899766 67899999977752 333 33346799 999997 5689999976 4577778667
Q ss_pred eEEEEeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEE
Q 022967 147 VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVA 224 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~ 224 (289)
.+.+.. ..+..|++|++||. |.|||+|.. ..++|++.++++...+.+. ..+..|+||+
T Consensus 118 ~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Gla 177 (619)
T 3s94_A 118 RKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLT 177 (619)
T ss_dssp CEEEEC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEEE
T ss_pred EEEEEe----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEEE
Confidence 455543 23568999999984 789999843 1368999999866555443 5788999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
++++++.|||+|...++|++++++|... +.+.......|.+|+++++ ++|++.+.
T Consensus 178 ld~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~~~~P~gi~~~~~-~ly~td~~ 232 (619)
T 3s94_A 178 LDYEEQKLYWADAKLNFIHKSNLDGTNR---QAVVKGSLPHPFALTLFED-ILYWTDWS 232 (619)
T ss_dssp EETTTTEEEEEETTTCCEEEESSSCCEE---C---------CCCEEESSS-EEEEECTT
T ss_pred EEccCCEEEEEeCCCCeEEEecCCCCcc---EEEEeCCCCCceEEEEeCC-EEEEecCC
Confidence 9999889999999999999999987422 2222222257999999986 88888764
No 35
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=3.7e-16 Score=135.50 Aligned_cols=188 Identities=12% Similarity=0.049 Sum_probs=133.5
Q ss_pred cCCcceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecC------cCccCeEEcCCCcEEEEeC--CCceEEEe-C
Q 022967 76 LNGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGG------DTLLGITTTQENEILVCDA--DKGLLKVT-E 144 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~------~p~~gl~~d~~g~l~v~~~--~~~i~~~~-~ 144 (289)
...|++++++++|++|+++ .++.|.++| .+++......... .|. +|++ .+++|||++. .+.|..+| .
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence 4789999998889999988 789999999 4566554333344 788 9999 5789999985 46799999 6
Q ss_pred CC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC--CCCCcc
Q 022967 145 EG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--SLFFAN 221 (289)
Q Consensus 145 ~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--~~~~p~ 221 (289)
++ +...... ...|.+++++++|++|++...... ........+.|+++|++++++..... ....|+
T Consensus 161 t~~~~~~i~~-----g~~p~~i~~~~dG~l~v~~~~~~~-------~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~ 228 (328)
T 3dsm_A 161 TDKVVDELTI-----GIQPTSLVMDKYNKMWTITDGGYE-------GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPS 228 (328)
T ss_dssp TTEEEEEEEC-----SSCBCCCEECTTSEEEEEBCCBCT-------TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCE
T ss_pred CCeEEEEEEc-----CCCccceEEcCCCCEEEEECCCcc-------CCccccCCceEEEEECCCCeEEEEEecCCCCCce
Confidence 66 3322221 135789999999999998754100 00000113689999998887653322 234799
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCC-CCCEEEEE
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAI 281 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~lwv~~ 281 (289)
+++++||++.||+++. .|++||.++.++.. ..+.......|+++++|+ +|++||+.
T Consensus 229 ~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN---DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEECTTSCEEEEESS---SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred eEEEecCCCEEEEEcc---EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 9999999999999975 89999987654422 122221135799999996 78999998
No 36
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.74 E-value=1.2e-16 Score=140.14 Aligned_cols=166 Identities=14% Similarity=0.165 Sum_probs=108.1
Q ss_pred ceeEeccCCcCCcceEEEccCCC-EEEEecCCeEEEEecCCceEE-ee-------eecCcCccCeEEcC----CCcEEEE
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGV-LYTATRDGWIKRLHKNGTWEN-WK-------LIGGDTLLGITTTQ----ENEILVC 133 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~-l~v~~~~g~i~~~~~~g~~~~-~~-------~~~~~p~~gl~~d~----~g~l~v~ 133 (289)
.++.+..+ +..|++|+++++|+ ||+++..|+|++++.+|+... +. ...+.++ ||++++ ++.||++
T Consensus 9 ~~~~va~~-l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 9 NVEVLQDK-LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEEEEEE-ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEEEE
T ss_pred EEEEEECC-CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEEEE
Confidence 44556655 78999999999999 999998899999997775432 11 1224567 999998 5899999
Q ss_pred eCC--------CceEEEe-C-C-C-e---EEEEeccCC--ccccCccceEEcCCCcEEEeeCCCccCccccccccceecC
Q 022967 134 DAD--------KGLLKVT-E-E-G-V---TVLASHVNG--SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKP 196 (289)
Q Consensus 134 ~~~--------~~i~~~~-~-~-g-~---~~~~~~~~~--~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~ 196 (289)
... .+|++++ . + + + +++....+. ...+.+.+|+++|||.|||+.+.... ....++. ...
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q~~--~~~ 162 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPTAQDL--DKL 162 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGGGGCT--TSC
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCccCCC--CCC
Confidence 642 3588876 3 2 2 2 233333332 24567889999999999999764211 1101110 123
Q ss_pred CCEEEEEeCCCC-------------eEEEeeCCCCCcceEEEecCCCEEEEEeCC
Q 022967 197 HGKLLKYDPSLN-------------ETSILLDSLFFANGVALSKDEDYLVVCETF 238 (289)
Q Consensus 197 ~g~i~~~~~~~~-------------~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~ 238 (289)
.|+|+|+++++. ..++++.++++|.|++|+++.+.||++|.+
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC
Confidence 467888888753 344556677777777777744447776654
No 37
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=4.5e-16 Score=139.16 Aligned_cols=189 Identities=16% Similarity=0.229 Sum_probs=129.8
Q ss_pred cCCcceEEEccCCC-EEEEecCC--eEEEEecCCce--EEe----eeecCcCccCeEEcC-CCcEEEEeCCCceEEEe-C
Q 022967 76 LNGPEDVCVDRNGV-LYTATRDG--WIKRLHKNGTW--ENW----KLIGGDTLLGITTTQ-ENEILVCDADKGLLKVT-E 144 (289)
Q Consensus 76 ~~~p~~l~~d~~g~-l~v~~~~g--~i~~~~~~g~~--~~~----~~~~~~p~~gl~~d~-~g~l~v~~~~~~i~~~~-~ 144 (289)
...|. ++++++|+ ||+++.++ +|++++.++.. ..+ ......|. ++++++ +|.||+++..+.|++++ .
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECC
Confidence 35577 99999776 67777544 89999954332 222 11346788 999998 78999988756799999 4
Q ss_pred CC-eEEEEec-cCCccccCcc-ceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-C---
Q 022967 145 EG-VTVLASH-VNGSRINLAD-DLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-S--- 216 (289)
Q Consensus 145 ~g-~~~~~~~-~~~~~~~~~~-~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~--- 216 (289)
.+ ...+... ..+.....|. +|+++| +|+||+++.. .++|+++++++. ...+.. .
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~g~-~~~~~g~~~~~ 310 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPDGE-CEWFCGSATQK 310 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTTCC-EEEEEECTTCC
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecCCC-EEEEEeCCCCC
Confidence 45 5444221 1111112345 999999 6899999864 468999998854 444432 2
Q ss_pred -----------CCCcceEEEecCCCEEEEEeC-CCCeEEEEEecCCCCcceee------eecc-----CCCCCCceeeCC
Q 022967 217 -----------LFFANGVALSKDEDYLVVCET-FKFRCLKYWLKGESKEQTEI------FVEN-----LPGGPDNIKLAP 273 (289)
Q Consensus 217 -----------~~~p~gl~~~~d~~~l~v~~~-~~~~i~~~~~~~~~~~~~~~------~~~~-----~~~~p~~i~~d~ 273 (289)
+..|++++++++|+ |||+|+ .+++|++|++.+..+..... +.+. ....|.+|++|+
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred CcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 56799999999998 999999 99999999954322211100 0000 014699999999
Q ss_pred CCCEEEEEeCcc
Q 022967 274 DGSFWIAILQVF 285 (289)
Q Consensus 274 ~G~lwv~~~~g~ 285 (289)
+|+|||+....+
T Consensus 390 ~g~lyVad~~n~ 401 (409)
T 3hrp_A 390 EGGYWIAEAWGK 401 (409)
T ss_dssp SSEEEEEESTTC
T ss_pred CCCEEEEECCCC
Confidence 999999987643
No 38
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.72 E-value=1e-15 Score=146.63 Aligned_cols=183 Identities=11% Similarity=0.081 Sum_probs=134.9
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCc-----eEEeee-ecCcCccCeEEcCCC-cEEEEeCC-CceEEEeCC
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-----WENWKL-IGGDTLLGITTTQEN-EILVCDAD-KGLLKVTEE 145 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~-----~~~~~~-~~~~p~~gl~~d~~g-~l~v~~~~-~~i~~~~~~ 145 (289)
+..|.+|++|. ++.||+++ .+++|++++.+|. ...+.. ....|. ||++|..+ +||+++.. +.|.+++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 67899999998 78899766 6788999986652 233332 456799 99999654 89999976 468888866
Q ss_pred C--eEEEEeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcc
Q 022967 146 G--VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFAN 221 (289)
Q Consensus 146 g--~~~~~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~ 221 (289)
| .+.+.. ..+..|++|++++. |+|||++.. ..++|++++.++.....+ ..++..|+
T Consensus 502 G~~~~~l~~----~~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 502 GVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp SSSEEEEEE----CTTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCeEEEEEe----CCCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeCCCCCce
Confidence 6 445443 23457999999985 899999854 126899999986665544 45688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeecc--CCCCCCceeeCCCCCEEEEEeC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
||++++.++.|||+|...++|++++++|... ..++.. .-..|.+|+++. ++||++.+.
T Consensus 562 GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P~glav~~-~~lYwtD~~ 621 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVFE-DKVFWTDII 621 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCCCEEEEeC-CEEEEEECC
Confidence 9999998889999999999999999987532 223222 113577888865 488888764
No 39
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.70 E-value=2.1e-15 Score=141.44 Aligned_cols=185 Identities=14% Similarity=0.108 Sum_probs=138.1
Q ss_pred CcCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCce--EEeee------ecCcCccCeEEcCC-CcEEEEeCCCc-eEEE
Q 022967 75 ILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTW--ENWKL------IGGDTLLGITTTQE-NEILVCDADKG-LLKV 142 (289)
Q Consensus 75 ~~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~--~~~~~------~~~~p~~gl~~d~~-g~l~v~~~~~~-i~~~ 142 (289)
.+..+.+|++|+ ++.||+++ ..++|++++.+|.. +.+.. ....|. |||+|.. ++||+++...+ |..+
T Consensus 338 ~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~-glAvD~~~~nLY~td~~~~~I~v~ 416 (628)
T 4a0p_A 338 SLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPY-DLSIDIYSRYIYWTCEATNVINVT 416 (628)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEE-EEEEETTTTEEEEEETTTTEEEEE
T ss_pred hcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcc-eEEeeccCCeEEEEcCCCCEEEEE
Confidence 367788899998 78899766 67899999977743 23322 245788 9999976 57999997644 5566
Q ss_pred eCCC--eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCC
Q 022967 143 TEEG--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLF 218 (289)
Q Consensus 143 ~~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~ 218 (289)
+.+| .+.+... .+..|++|+++| +|.|||+|... ..++|++.++++...+.+. ..+.
T Consensus 417 ~~~G~~~~~l~~~----~l~~Pr~iavdp~~g~ly~tD~g~---------------~~~~I~r~~~dG~~~~~l~~~~l~ 477 (628)
T 4a0p_A 417 RLDGRSVGVVLKG----EQDRPRAVVVNPEKGYMYFTNLQE---------------RSPKIERAALDGTEREVLFFSGLS 477 (628)
T ss_dssp ETTSCEEEEEEEC----TTCCEEEEEEETTTTEEEEEEEET---------------TEEEEEEEETTSCSCEEEECSSCS
T ss_pred ECCCCeEEEEEeC----CCCceeeEEEecCCCeEEEeecCC---------------CCCeEEEEeCCCCCcEEEEeccCC
Confidence 6677 3444331 346799999999 89999998531 1137999999866555444 4688
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
.|+||+++++++.|||+|...++|++++++|.. .+.+.......|.+|++++ |++|++++.
T Consensus 478 ~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~---r~~~~~~~~~~P~glav~~-~~ly~tD~~ 538 (628)
T 4a0p_A 478 KPIALALDSRLGKLFWADSDLRRIESSDLSGAN---RIVLEDSNILQPVGLTVFE-NWLYWIDKQ 538 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCEEEEEEET-TEEEEEETT
T ss_pred CccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc---eEEEEcCCCCCcEEEEEEC-CEEEEEECC
Confidence 999999999988999999999999999998753 3344433335799999997 789988865
No 40
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.69 E-value=1.8e-15 Score=136.05 Aligned_cols=187 Identities=12% Similarity=0.076 Sum_probs=127.7
Q ss_pred CcCCcceEEEccCCCEEEEecC-----CeEEEEecCCceE--EeeeecCcCccCeEEcC-CCcEEEEeCC-CceEEEeC-
Q 022967 75 ILNGPEDVCVDRNGVLYTATRD-----GWIKRLHKNGTWE--NWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTE- 144 (289)
Q Consensus 75 ~~~~p~~l~~d~~g~l~v~~~~-----g~i~~~~~~g~~~--~~~~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~- 144 (289)
.+..|.+|++|++|+||+++.. ..++.++.++.+. ........|. ++++|+ +|+|||++.. +.|++++.
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~-giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAK-TCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBC-CCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCC-EEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 3678999999999999988753 2466666444322 1222457799 999998 8999999976 46999994
Q ss_pred CC-e-EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCC--CCeE---EEeeC-
Q 022967 145 EG-V-TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS--LNET---SILLD- 215 (289)
Q Consensus 145 ~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~~~~---~~~~~- 215 (289)
+| + +.+..... ...+.+|+++++|+ |||++.. +++|++++.+ ++.+ ..++.
T Consensus 259 ~g~~~~~~~~~~~---~~~~~~ia~dpdG~~LYvad~~-----------------~~~I~~~~~d~~~~~~~~~~~~ag~ 318 (433)
T 4hw6_A 259 TGTLTEEEVMMDT---KGSNFHIVWHPTGDWAYIIYNG-----------------KHCIYRVDYNRETGKLAVPYIVCGQ 318 (433)
T ss_dssp TCCEEEEEEECSC---CSSCEEEEECTTSSEEEEEETT-----------------TTEEEEEEBCTTTCCBCCCEEEEEC
T ss_pred CCeEEEEEeccCC---CCCcccEEEeCCCCEEEEEeCC-----------------CCEEEEEeCCCCCcccCcEEEEEec
Confidence 47 5 44432211 12345799999997 9999864 4688887754 3322 12221
Q ss_pred --------------CCCCcceEEE---------ecCCCEEEEEeCCCCeEEEEEecCCCCccee--------eeecc---
Q 022967 216 --------------SLFFANGVAL---------SKDEDYLVVCETFKFRCLKYWLKGESKEQTE--------IFVEN--- 261 (289)
Q Consensus 216 --------------~~~~p~gl~~---------~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~--------~~~~~--- 261 (289)
.+..|.++++ +.+++ |||+|+.+++|++++.+|. +.... -+.+.
T Consensus 319 ~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~~G~-v~t~~G~g~~~~~G~~dG~~~ 396 (433)
T 4hw6_A 319 HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTPEGR-VTTYAGRGNSREWGYVDGELR 396 (433)
T ss_dssp TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECTTSE-EEEEECCCTTCSSCCBCEETT
T ss_pred CCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECCCCC-EEEEEeCCCCCccccCCCccc
Confidence 2567999999 65554 9999999999999986542 11100 00111
Q ss_pred ---CCCCCCceeeC-CCCCEEEEEeCc
Q 022967 262 ---LPGGPDNIKLA-PDGSFWIAILQV 284 (289)
Q Consensus 262 ---~~~~p~~i~~d-~~G~lwv~~~~g 284 (289)
.-..|.+|++| .+|+|||+....
T Consensus 397 ~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 397 SQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp TTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred cccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 11469999999 899999998754
No 41
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=3.6e-15 Score=129.16 Aligned_cols=177 Identities=10% Similarity=0.153 Sum_probs=119.4
Q ss_pred ccCCcCCcceEEEccCCCEEEEe-cCCeEEEEecCCce---EEeee---------ecCcCccCeEEcC-CCcEEEEeC--
Q 022967 72 GEGILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTW---ENWKL---------IGGDTLLGITTTQ-ENEILVCDA-- 135 (289)
Q Consensus 72 ~~~~~~~p~~l~~d~~g~l~v~~-~~g~i~~~~~~g~~---~~~~~---------~~~~p~~gl~~d~-~g~l~v~~~-- 135 (289)
..+.+..|.+|++|++|+||+++ .+++|.+++.+|+. ..+.. ....|. +|++++ +|+|||++.
T Consensus 86 ~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 86 GKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-DVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp CTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-EEEECTTTCCEEEEECSS
T ss_pred CCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-EEEEeCCCCeEEEEeCCC
Confidence 33456789999999999999776 57899999987762 22311 123688 999998 899999995
Q ss_pred CCceEEEeCCC--eEEEEeccC-----CccccCccceEEcCC-CcEEEeeCCCc----cCcc--cccccc----------
Q 022967 136 DKGLLKVTEEG--VTVLASHVN-----GSRINLADDLIAATD-GSIYFSVASTK----FGLH--NWGLDL---------- 191 (289)
Q Consensus 136 ~~~i~~~~~~g--~~~~~~~~~-----~~~~~~~~~l~~~~d-G~lyv~~~~~~----~~~~--~~~~~~---------- 191 (289)
.++|.+++.+| +..+..... ...+..|.+|+++++ |+||+++.... |... .....+
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 46788999777 444322211 134567999999998 89999986521 1100 000000
Q ss_pred -----------------ceecCCCEEEEEeCCCCeEEEee----CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 192 -----------------LEAKPHGKLLKYDPSLNETSILL----DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 192 -----------------~~~~~~g~i~~~~~~~~~~~~~~----~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+.......++.++..+++..... ..+..|.+|+++++| .|||++..+++|++|++++.
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEEC
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCcc
Confidence 00011225666775555554432 456778999999988 59999999999999988764
No 42
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.69 E-value=1.2e-15 Score=131.79 Aligned_cols=178 Identities=15% Similarity=0.140 Sum_probs=126.4
Q ss_pred CCcceEEEcc-CCCEEEEecCCeEEEEecC-CceEEeeee-----cCcCccCeEEcC-CCcEEEEeCC------------
Q 022967 77 NGPEDVCVDR-NGVLYTATRDGWIKRLHKN-GTWENWKLI-----GGDTLLGITTTQ-ENEILVCDAD------------ 136 (289)
Q Consensus 77 ~~p~~l~~d~-~g~l~v~~~~g~i~~~~~~-g~~~~~~~~-----~~~p~~gl~~d~-~g~l~v~~~~------------ 136 (289)
..|.+|++++ +|+||+++..++|++++.+ +..+.+... ...|. ++++|+ +|+|||++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~-~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY-AVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEE-EEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccc-eEEEecCCCEEEEECCcccccccccceeh
Confidence 4689999997 8999999877779999865 444444321 23578 999999 9999999854
Q ss_pred ------CceEEEeC-CC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCC
Q 022967 137 ------KGLLKVTE-EG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (289)
Q Consensus 137 ------~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 207 (289)
.++++++. ++ .+.+.. .+..|++|++++||+ |||++.. .++|++++.++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p~gia~~~dg~~lyv~d~~-----------------~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLK-----ELHVPGGAEVSADSSFVLVAEFL-----------------SHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEE-----EESCCCEEEECTTSSEEEEEEGG-----------------GTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEecc-----CCccCcceEECCCCCEEEEEeCC-----------------CCeEEEEECCC
Confidence 35899994 46 555433 245789999999986 9999753 36899999874
Q ss_pred ---CeEEEeeCCCCCcceEEEecCCCEEEEEeCC----------CCeEEEEEecCCCCcceeeeecc--C-CCCCCceee
Q 022967 208 ---NETSILLDSLFFANGVALSKDEDYLVVCETF----------KFRCLKYWLKGESKEQTEIFVEN--L-PGGPDNIKL 271 (289)
Q Consensus 208 ---~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~----------~~~i~~~~~~~~~~~~~~~~~~~--~-~~~p~~i~~ 271 (289)
+..+.+.. ...|.+++++++|+ |||++.. ..+|++|+.++..+ ..+... . ...|.+++.
T Consensus 217 ~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~---~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 217 PKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNIL---EVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp TTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEE---EEEECCTTTTTSCCCEEEE
T ss_pred CcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEE---EEEECCCCCccccceEEEE
Confidence 34444433 22399999999998 9999865 46799998765422 222211 1 235677766
Q ss_pred CCCCCEEEEEeC
Q 022967 272 APDGSFWIAILQ 283 (289)
Q Consensus 272 d~~G~lwv~~~~ 283 (289)
+ +|+|||++..
T Consensus 292 ~-~g~L~v~~~~ 302 (322)
T 2fp8_A 292 H-DGLLYIGTLF 302 (322)
T ss_dssp E-TTEEEEECSS
T ss_pred e-CCEEEEeecC
Confidence 4 6899999753
No 43
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.68 E-value=2.2e-16 Score=150.10 Aligned_cols=183 Identities=11% Similarity=0.098 Sum_probs=132.0
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCC-----ceEEee-eecCcCccCeEEc-CCCcEEEEeCC-CceEEEeCC
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNG-----TWENWK-LIGGDTLLGITTT-QENEILVCDAD-KGLLKVTEE 145 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g-----~~~~~~-~~~~~p~~gl~~d-~~g~l~v~~~~-~~i~~~~~~ 145 (289)
+..|.+|++++ ++.||+++ .+++|++++.++ ....+. .....|. ||++| ..++||+++.. ++|.+++.+
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 57899999997 67899776 668999999665 222222 2335688 99999 56789999865 568888866
Q ss_pred C--eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcc
Q 022967 146 G--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFAN 221 (289)
Q Consensus 146 g--~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~ 221 (289)
| .+.+.. ..+..|++|+++| +|.|||++.. ..++|+++++++...+.+ ...+..|+
T Consensus 484 g~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 484 GVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SCCEEEECC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCceEEEEe----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 6 444432 2345789999998 5789999853 126799998875544433 35688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeec--cCCCCCCceeeCCCCCEEEEEeC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
||+++++++.|||+++..++|++++++|.. ...++. .....|.+|++|.+ ++|++.+.
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 999999988899999999999999988632 223332 12257999999986 56666654
No 44
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.68 E-value=8.3e-15 Score=128.19 Aligned_cols=179 Identities=13% Similarity=0.129 Sum_probs=131.9
Q ss_pred ceEEEccCCCEEEEecCCeEEEEecCCc-eEEeeeecCcCccCeEEc-CCCcEEEEeCC-CceEEEeCCC--eEEEEecc
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLHKNGT-WENWKLIGGDTLLGITTT-QENEILVCDAD-KGLLKVTEEG--VTVLASHV 154 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~~~g~-~~~~~~~~~~p~~gl~~d-~~g~l~v~~~~-~~i~~~~~~g--~~~~~~~~ 154 (289)
.+.+.++++.|+++... .|.+++.+|. .+........|. ++++| .++.||++|.. +.|++++.+| .+.+..
T Consensus 37 ~C~~~~~~~~ll~~~~~-~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-- 112 (349)
T 3v64_C 37 SCKALGPEPVLLFANRI-DIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-- 112 (349)
T ss_dssp CEEESSSCCEEEEECBS-CEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--
T ss_pred cccccccCceeEeeccc-ceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEe--
Confidence 44555566677777654 4999997664 445555567788 99999 56789999965 5689999555 454432
Q ss_pred CCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEEecCCCEE
Q 022967 155 NGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYL 232 (289)
Q Consensus 155 ~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d~~~l 232 (289)
..+..|.+|++|+ +|+||+++.. .++|.+++.++...+.+. .++..|++++++|+++.|
T Consensus 113 --~~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 113 --TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp --SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred --CCCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 1245789999997 6799999864 368999999866544443 567899999999988899
Q ss_pred EEEeCCC-CeEEEEEecCCCCcceeeeeccCCCCCCceeeC-CCCCEEEEEeCc
Q 022967 233 VVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDGSFWIAILQV 284 (289)
Q Consensus 233 ~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~lwv~~~~g 284 (289)
||+|.+. .+|++++++|... ..+....-..|++|++| .+++||++....
T Consensus 174 y~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp EEEECSSSCEEEEEETTSCSC---EESCCSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEeccCCCCEEEEEeCCCCCc---EEEEECCCCCcceEEEeCCCCEEEEEECCC
Confidence 9999988 9999999987422 22322223579999999 567899998654
No 45
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.67 E-value=1.6e-14 Score=121.30 Aligned_cols=176 Identities=15% Similarity=0.117 Sum_probs=128.5
Q ss_pred CcCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCceE-Eeee-ecCcCccCeEEcC-CCcEEEEeCC---CceEEEeCCC
Q 022967 75 ILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTWE-NWKL-IGGDTLLGITTTQ-ENEILVCDAD---KGLLKVTEEG 146 (289)
Q Consensus 75 ~~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~~-~~~~-~~~~p~~gl~~d~-~g~l~v~~~~---~~i~~~~~~g 146 (289)
.+..|+++++|+ +++||+++ ..++|.+++.+|+.. .+.. ....|. ++++|+ +|+||+++.. ..|++++.+|
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~-~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPR-GIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE-EEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCcc-EEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 367899999998 57899777 568999999777532 2322 235788 999998 5789999865 4688888666
Q ss_pred --eEEEEeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceE
Q 022967 147 --VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGV 223 (289)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl 223 (289)
.+.+.. ..+..|++|+++++ ++||+++.. .++|++++++++....+...+..|.++
T Consensus 156 ~~~~~~~~----~~~~~P~gia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~P~gi 214 (267)
T 1npe_A 156 TNRRILAQ----DNLGLPNGLTFDAFSSQLCWVDAG-----------------THRAECLNPAQPGRRKVLEGLQYPFAV 214 (267)
T ss_dssp CCCEEEEC----TTCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTEEEEEEEEECCCSEEEE
T ss_pred CCcEEEEE----CCCCCCcEEEEcCCCCEEEEEECC-----------------CCEEEEEecCCCceEEEecCCCCceEE
Confidence 444432 13457999999996 589999864 468999999866655566677889999
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 224 ALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
+++ ++.|||++..+++|++++.++.+. .+.........|.+|++..++.
T Consensus 215 ~~d--~~~lyva~~~~~~v~~~d~~~g~~--~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 215 TSY--GKNLYYTDWKTNSVIAMDLAISKE--MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEE--TTEEEEEETTTTEEEEEETTTTEE--EEEECCSSCCCCCCEEEECSCC
T ss_pred EEe--CCEEEEEECCCCeEEEEeCCCCCc--eEEEccccccccceeeecCccC
Confidence 875 567999999999999999764322 1122111112589999888764
No 46
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=4.4e-15 Score=133.51 Aligned_cols=187 Identities=13% Similarity=0.130 Sum_probs=126.7
Q ss_pred cCCcceEEEccCCC-EEEEecC-----CeEEEEecCCceE--EeeeecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCC
Q 022967 76 LNGPEDVCVDRNGV-LYTATRD-----GWIKRLHKNGTWE--NWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEE 145 (289)
Q Consensus 76 ~~~p~~l~~d~~g~-l~v~~~~-----g~i~~~~~~g~~~--~~~~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~ 145 (289)
...|.+|++|++|+ ||+++.. ..++.++.+|.+. ........|. ++++++ +|+||+++.. ++|++++.+
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~-giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCN-GAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCC-CEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCce-EEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 57899999999988 9988742 2466677666543 2222456799 999998 8999999976 569999954
Q ss_pred C--eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCC--CeE---EEeeC--
Q 022967 146 G--VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL--NET---SILLD-- 215 (289)
Q Consensus 146 g--~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~--~~~---~~~~~-- 215 (289)
+ ...+... . ....|++|+++++|+ ||+++.. .++|++++.++ +.+ ..++.
T Consensus 257 ~~~~~~~~~~-~--~~~~P~gia~~pdG~~lyv~d~~-----------------~~~I~~~~~d~~~~~~~~~~~~ag~~ 316 (430)
T 3tc9_A 257 TQETTPLFTI-Q--DSGWEFHIQFHPSGNYAYIVVVN-----------------QHYILRSDYDWKTKRLTTPYIVCGQQ 316 (430)
T ss_dssp TTEEEEEEEC-S--SSSCCEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEECCCEEEEECT
T ss_pred CCcEEEEEEc-C--CCCcceeEEEcCCCCEEEEEECC-----------------CCEEEEEeCCcccccccceEEEeccC
Confidence 4 4333321 1 124689999999998 9999864 46788877653 222 12221
Q ss_pred -------------CCCCcc-eEEEec-------CCCEEEEEeCCCCeEEEEEecCCCCcceee--------eecc-----
Q 022967 216 -------------SLFFAN-GVALSK-------DEDYLVVCETFKFRCLKYWLKGESKEQTEI--------FVEN----- 261 (289)
Q Consensus 216 -------------~~~~p~-gl~~~~-------d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~--------~~~~----- 261 (289)
.+..|. +++++. ....|||+|+.+++|++++.+|. +..... +.+.
T Consensus 317 g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~-v~~~~g~g~~~~~G~~dG~~~~~ 395 (430)
T 3tc9_A 317 GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGR-VTTFAGRGSNGTSGYNDGDLRQE 395 (430)
T ss_dssp TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSE-EEEEEECCTTSSSSCBCEETTTT
T ss_pred CCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCc-EEEEEeCCCCCCCcccCCCchhh
Confidence 155688 788753 12359999999999999986542 111100 0011
Q ss_pred -CCCCCCceeeCC-CCCEEEEEeCc
Q 022967 262 -LPGGPDNIKLAP-DGSFWIAILQV 284 (289)
Q Consensus 262 -~~~~p~~i~~d~-~G~lwv~~~~g 284 (289)
.-..|.+|++|+ +|+|||+....
T Consensus 396 ~~~~~P~giavd~~~g~lyVaD~~n 420 (430)
T 3tc9_A 396 ARFNHPEGIVYDEERECFFIGDREN 420 (430)
T ss_dssp CBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred cEeCCCcEEEEECCCCEEEEEECCC
Confidence 013699999998 69999998653
No 47
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=3.1e-14 Score=121.03 Aligned_cols=177 Identities=11% Similarity=0.187 Sum_probs=127.2
Q ss_pred cCCcceEEEccCCCEEEEec-CCeEEEEec-CCceEEeeee-----cCcCccCeEEcCCCcEEEEeC-------------
Q 022967 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHK-NGTWENWKLI-----GGDTLLGITTTQENEILVCDA------------- 135 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~-~g~i~~~~~-~g~~~~~~~~-----~~~p~~gl~~d~~g~l~v~~~------------- 135 (289)
...|.+++++++|+||+++. +++|.+++. +|+...+... ...+. +++++++|++|+++.
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCccccccccccccc
Confidence 45689999999999998774 588999995 8887655322 23577 999999999999853
Q ss_pred -----CCceEEEeCCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCC-CC
Q 022967 136 -----DKGLLKVTEEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LN 208 (289)
Q Consensus 136 -----~~~i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~ 208 (289)
..+|++++.+| ++.+.. ....++++++++||++++++.. .+.|++++.+ ++
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~~~-----~~~~~~gi~~s~dg~~lv~~~~-----------------~~~i~~~~~~~~g 204 (296)
T 3e5z_A 147 EMELPGRWVFRLAPDGTLSAPIR-----DRVKPNGLAFLPSGNLLVSDTG-----------------DNATHRYCLNARG 204 (296)
T ss_dssp CCCSSSCEEEEECTTSCEEEEEC-----CCSSEEEEEECTTSCEEEEETT-----------------TTEEEEEEECSSS
T ss_pred cccCCCcEEEEECCCCCEEEeec-----CCCCCccEEECCCCCEEEEeCC-----------------CCeEEEEEECCCC
Confidence 24799999557 655432 2346789999999987777653 3678888865 34
Q ss_pred eE----EEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeC-CCC-CEEEEEe
Q 022967 209 ET----SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDG-SFWIAIL 282 (289)
Q Consensus 209 ~~----~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~G-~lwv~~~ 282 (289)
++ ..+......|.+++++++|+ +|++. .++|.+|+.++..+ ..+. .... |.+++++ ++| .||+++.
T Consensus 205 ~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~~~---~~~~-~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 205 ETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGDEL---GRVL-TPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSCEE---EEEE-CSSC-CCEEEEESTTSCEEEEEET
T ss_pred cCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCCEE---EEEE-CCCC-ceeEEEECCCCCEEEEEcC
Confidence 44 22322345689999999998 99997 68999999765322 2222 1223 8888884 565 6999986
Q ss_pred C
Q 022967 283 Q 283 (289)
Q Consensus 283 ~ 283 (289)
+
T Consensus 277 ~ 277 (296)
T 3e5z_A 277 T 277 (296)
T ss_dssp T
T ss_pred C
Confidence 4
No 48
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=1.1e-14 Score=124.43 Aligned_cols=180 Identities=14% Similarity=0.162 Sum_probs=129.5
Q ss_pred CCcceEEEccC-CCEEEEecCCeEEEEecCCceEEe-eee-----cCcCccCeEEcCCCcEEEEeCC-------------
Q 022967 77 NGPEDVCVDRN-GVLYTATRDGWIKRLHKNGTWENW-KLI-----GGDTLLGITTTQENEILVCDAD------------- 136 (289)
Q Consensus 77 ~~p~~l~~d~~-g~l~v~~~~g~i~~~~~~g~~~~~-~~~-----~~~p~~gl~~d~~g~l~v~~~~------------- 136 (289)
..|.+++++++ |+||+++..++|++++.+|+...+ ... ...+. ++++|++|++|+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCN-DCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCC-EEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCc-CEEECCCCCEEEEecCccccccccccccc
Confidence 56899999998 999998876789999966877655 321 13477 9999999999999854
Q ss_pred ---CceEEEeCCC-eEEEEeccCCccccCccceEEc----CCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCC-
Q 022967 137 ---KGLLKVTEEG-VTVLASHVNGSRINLADDLIAA----TDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS- 206 (289)
Q Consensus 137 ---~~i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~----~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~- 206 (289)
.++++++.+| ...+... ...+++++++ +|| .||+++.. .++|++++.+
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~-----------------~~~i~~~~~~~ 207 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAETP-----------------TKKLWSYDIKG 207 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEETT-----------------TTEEEEEEEEE
T ss_pred CCCCeEEEECCCCCEEEeccC-----CCCcceEEEecccCCCCCEEEEEECC-----------------CCeEEEEECCC
Confidence 3689998557 5544322 2357899999 999 69998753 3678888864
Q ss_pred CCeEE---Eee---CCC-CCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EE
Q 022967 207 LNETS---ILL---DSL-FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FW 278 (289)
Q Consensus 207 ~~~~~---~~~---~~~-~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lw 278 (289)
+++.. .+. ... ..|.+++++++|+ +|+++...++|.+|+.++.... ..+. .....|.+++++++|+ ||
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~--~~~~-~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPK--MRIR-CPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCS--EEEE-CSSSCEEEEEECTTSSEEE
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEe--EEEe-CCCCCceeEEECCCCCEEE
Confidence 34321 111 122 5689999999987 9999877889999987622221 1121 1125688999999998 99
Q ss_pred EEEeC
Q 022967 279 IAILQ 283 (289)
Q Consensus 279 v~~~~ 283 (289)
+++..
T Consensus 284 v~~~~ 288 (314)
T 1pjx_A 284 VTEHE 288 (314)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99864
No 49
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.65 E-value=1.6e-14 Score=128.13 Aligned_cols=180 Identities=12% Similarity=0.113 Sum_probs=132.3
Q ss_pred cceEEEccCCCEEEEecCCeEEEEecCC-ceEEeeeecCcCccCeEEc-CCCcEEEEeCC-CceEEEeCCC--eEEEEec
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTT-QENEILVCDAD-KGLLKVTEEG--VTVLASH 153 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~~g-~~~~~~~~~~~p~~gl~~d-~~g~l~v~~~~-~~i~~~~~~g--~~~~~~~ 153 (289)
-.+.+.++++.|+++.. +.|++++.++ ..+.+......|. |+++| .++.||++|.. +.|++++.+| .+.+..
T Consensus 79 ~~C~~~~~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~- 155 (386)
T 3v65_B 79 RSCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS- 155 (386)
T ss_dssp SCEEECSSCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-
T ss_pred CeECCccccceeEeecC-ccceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-
Confidence 34455566666777665 5699999655 4555556667788 99999 46789999966 5689999555 444432
Q ss_pred cCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-eCCCCCcceEEEecCCCE
Q 022967 154 VNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDEDY 231 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~p~gl~~~~d~~~ 231 (289)
..+..|.+|++++ +|+|||++.. .++|.+++.++...+.+ ..++..|++++++|+++.
T Consensus 156 ---~~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 156 ---TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp ---SSCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred ---CCCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 2245789999997 6799999864 36899999886554444 456789999999999899
Q ss_pred EEEEeCCC-CeEEEEEecCCCCcceeeeeccCCCCCCceeeC-CCCCEEEEEeCc
Q 022967 232 LVVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDGSFWIAILQV 284 (289)
Q Consensus 232 l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~lwv~~~~g 284 (289)
|||++.+. .+|++++++|... ..+....-..|.+|++| .+++||++....
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred EEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCeeeEEEeCCCCEEEEEECCC
Confidence 99999988 8999999887422 23332223579999999 567999998653
No 50
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.65 E-value=6.9e-15 Score=125.53 Aligned_cols=189 Identities=14% Similarity=0.130 Sum_probs=128.9
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecC-CceEEeeeec----C----cCccCeEE---cCCCcEEEE-eC-----
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKN-GTWENWKLIG----G----DTLLGITT---TQENEILVC-DA----- 135 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~-g~~~~~~~~~----~----~p~~gl~~---d~~g~l~v~-~~----- 135 (289)
-..||++.+|+ +|.+|+++ .+++|.+++++ +....+.... + .+. ||.+ |++|+|||+ +.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEccccccc
Confidence 46799999987 88999988 78999999976 4444432111 1 356 9999 788999994 42
Q ss_pred --------CCceEEEe-C---CC-eEEEEec--cC-------CccccCccceEEcCCCcEEEeeCCCccCccccccccce
Q 022967 136 --------DKGLLKVT-E---EG-VTVLASH--VN-------GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLE 193 (289)
Q Consensus 136 --------~~~i~~~~-~---~g-~~~~~~~--~~-------~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~ 193 (289)
...++++| . +| ....+.- .. +.....+++|++|++|++||++..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 24589999 5 46 4333331 11 113346899999999999998753
Q ss_pred ecCCCEEEEEeCCCCeEEEee------CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeec--c---C
Q 022967 194 AKPHGKLLKYDPSLNETSILL------DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--N---L 262 (289)
Q Consensus 194 ~~~~g~i~~~~~~~~~~~~~~------~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~---~ 262 (289)
+.+.|+++++++.....+. ....+++||+++||++.|++.++ .++|++||+.... ..+.-.. + .
T Consensus 157 --~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv--~~~v~~~~~G~~~~ 231 (334)
T 2p9w_A 157 --GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPY--AWPEPVKINGDFGT 231 (334)
T ss_dssp --SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSS--CCCEECEESSCCCC
T ss_pred --CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCc--ceeecccccCCccc
Confidence 1167999999966554432 12345789999999999999998 8999999987321 1011111 1 2
Q ss_pred CCCCCce-eeCCCCCE-EEEEeCc
Q 022967 263 PGGPDNI-KLAPDGSF-WIAILQV 284 (289)
Q Consensus 263 ~~~p~~i-~~d~~G~l-wv~~~~g 284 (289)
...|++| ....+|++ +|+....
T Consensus 232 ~~~~dgilp~~~~G~vllV~~~~~ 255 (334)
T 2p9w_A 232 LSGTEKIVTVPVGNESVLVGARAP 255 (334)
T ss_dssp CTTEEEEEEEEETTEEEEEEEETT
T ss_pred ccCcccccccccCCEEEEEEcCCC
Confidence 2457885 67778877 6666433
No 51
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.65 E-value=1.4e-14 Score=124.99 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=117.5
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCceEE-ee-eecCcCccCeEEcC-CCcEEEEeCC--CceEEEeCCC--
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTWEN-WK-LIGGDTLLGITTTQ-ENEILVCDAD--KGLLKVTEEG-- 146 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~~~-~~-~~~~~p~~gl~~d~-~g~l~v~~~~--~~i~~~~~~g-- 146 (289)
+..|+++++|+ +|+||+++ .+++|.+++.+|.... +. .....|. ||++|+ .|.||+++.+ ..|++++.+|
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~-giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPR-AIALDPSSGFMYWTDWGEVPKIERAGMDGSS 156 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE-EEEEEGGGTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCcc-EEEEeCCCCEEEEEecCCCCEEEEEEcCCCC
Confidence 67899999996 88999766 6789999998885433 22 4456799 999996 5789999953 5799999777
Q ss_pred eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCCcceEE
Q 022967 147 VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVA 224 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~p~gl~ 224 (289)
.+.+.. ..+..|++|++++ +++|||+|.. .++|++++.++...+.+.. .+..|.|++
T Consensus 157 ~~~~~~----~~l~~Pnglavd~~~~~lY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~~P~gla 215 (318)
T 3sov_A 157 RFIIIN----SEIYWPNGLTLDYEEQKLYWADAK-----------------LNFIHKSNLDGTNRQAVVKGSLPHPFALT 215 (318)
T ss_dssp CEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSCCSCEEEEE
T ss_pred eEEEEE----CCCCCccEEEEeccCCEEEEEECC-----------------CCEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 444433 2356899999998 5789999964 4789999998666555554 688999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEec
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
++ ++.+||++..+++|.+++..
T Consensus 216 v~--~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 216 LF--EDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EE--TTEEEEEETTTTEEEEEETT
T ss_pred Ee--CCEEEEEecCCCeEEEEECC
Confidence 96 45699999999999999984
No 52
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=1.2e-14 Score=131.53 Aligned_cols=185 Identities=12% Similarity=0.145 Sum_probs=132.4
Q ss_pred cCCcceEEEcc--CCCEEEEec-CCeEEEEe-cCCceEEeeeec----CcCccCeEE-------cCCCc-EEEEeCCC--
Q 022967 76 LNGPEDVCVDR--NGVLYTATR-DGWIKRLH-KNGTWENWKLIG----GDTLLGITT-------TQENE-ILVCDADK-- 137 (289)
Q Consensus 76 ~~~p~~l~~d~--~g~l~v~~~-~g~i~~~~-~~g~~~~~~~~~----~~p~~gl~~-------d~~g~-l~v~~~~~-- 137 (289)
+..|..|++|| +++||+... .++|++++ .++.+..+.... ..|. +|++ +++|+ ||+++...
T Consensus 138 ~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 138 FSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred cCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCCCCC
Confidence 56799999997 588997774 47899999 455666654432 3588 9999 99987 99998653
Q ss_pred -----ceEEEe--CCC-eE------EEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEE
Q 022967 138 -----GLLKVT--EEG-VT------VLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLK 202 (289)
Q Consensus 138 -----~i~~~~--~~g-~~------~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~ 202 (289)
.++.++ .+| +. .+. .+..|+++++++ +|.||+++.. .+.|++
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~-----------------~g~V~r 273 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE-----------------KGQVFR 273 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-----------------TTEEEE
T ss_pred cccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-----------------CCEEEE
Confidence 277776 335 42 222 245789999999 6899999864 478999
Q ss_pred EeCC-------CCeE------------EE-e-eCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCC--Ccceeeee
Q 022967 203 YDPS-------LNET------------SI-L-LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGES--KEQTEIFV 259 (289)
Q Consensus 203 ~~~~-------~~~~------------~~-~-~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~--~~~~~~~~ 259 (289)
+|++ ++.. +. + ......|.+|+++|+++.|||+|+.+++|++++.++.. +.....+.
T Consensus 274 ~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~a 353 (496)
T 3kya_A 274 LDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFV 353 (496)
T ss_dssp ECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEE
T ss_pred EecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEec
Confidence 9987 5543 12 2 12345689999999999999999999999999887642 11111221
Q ss_pred cc--------------CCCCCC-ceeeC-------CCCCEEEEEeCc
Q 022967 260 EN--------------LPGGPD-NIKLA-------PDGSFWIAILQV 284 (289)
Q Consensus 260 ~~--------------~~~~p~-~i~~d-------~~G~lwv~~~~g 284 (289)
.. .-..|. ++++| .+|+|||++...
T Consensus 354 G~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N 400 (496)
T 3kya_A 354 GGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN 400 (496)
T ss_dssp EBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG
T ss_pred CCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC
Confidence 11 113588 78887 679999998754
No 53
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.63 E-value=6.8e-14 Score=120.68 Aligned_cols=171 Identities=16% Similarity=0.175 Sum_probs=124.4
Q ss_pred CcCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCceE-Eeee-ecCcCccCeEEcC-CCcEEEEeCC--CceEEEeCCC-
Q 022967 75 ILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTWE-NWKL-IGGDTLLGITTTQ-ENEILVCDAD--KGLLKVTEEG- 146 (289)
Q Consensus 75 ~~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~~-~~~~-~~~~p~~gl~~d~-~g~l~v~~~~--~~i~~~~~~g- 146 (289)
.+..|+++++|+ +++||+++ .+++|.+++.+|+.. .+.. ....|. ++++|+ +|.||+++.+ ..|++++.+|
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~-~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE-EEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcc-eEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 367899999996 78899766 678999999877543 3333 356799 999996 6789999975 4689998777
Q ss_pred -eEEEEeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC---CCCCcc
Q 022967 147 -VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---SLFFAN 221 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~---~~~~p~ 221 (289)
.+.+.. ..+..|++|+++++ ++||++|.. .++|.++|.++...+.+.. .+..|.
T Consensus 154 ~~~~~~~----~~~~~P~gla~d~~~~~lY~~D~~-----------------~~~I~~~d~dg~~~~~~~~~~~~~~~P~ 212 (316)
T 1ijq_A 154 DIYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKRLAHPF 212 (316)
T ss_dssp CEEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred CeEEEEE----CCCCCceEEEEeccCCEEEEEECC-----------------CCeEEEEecCCCceEEEeecCCccCCcE
Confidence 444432 23568999999974 689999964 4689999998665555543 467899
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA 272 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 272 (289)
|++++ ++.+||++..+++|.+++..+.+. .+.+...+ ..|.+|+++
T Consensus 213 giav~--~~~ly~~d~~~~~V~~~~~~~g~~--~~~i~~~~-~~p~~i~v~ 258 (316)
T 1ijq_A 213 SLAVF--EDKVFWTDIINEAIFSANRLTGSD--VNLLAENL-LSPEDMVLF 258 (316)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEETTTCCC--CEEEECSC-SCCCCEEEE
T ss_pred EEEEE--CCEEEEEECCCCeEEEEeCCCCcc--eEEEecCC-CCceEEEEe
Confidence 99996 467999999999999999742221 22232222 246666655
No 54
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.63 E-value=1.4e-14 Score=123.66 Aligned_cols=182 Identities=8% Similarity=0.020 Sum_probs=128.2
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEec-CCceEEeeee-----cCcCccCeEEcCCCcEEEEeCC------------Cc
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI-----GGDTLLGITTTQENEILVCDAD------------KG 138 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~-----~~~p~~gl~~d~~g~l~v~~~~------------~~ 138 (289)
..|.+++++++|+||++. +++|++++. +|+++.+... ...+. ++++|++|++|+++.. .+
T Consensus 54 ~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCcE
Confidence 568899999999999887 567999994 5666655432 13466 8999999999998621 35
Q ss_pred eEEEeCCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeC--CCCeEE---
Q 022967 139 LLKVTEEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP--SLNETS--- 211 (289)
Q Consensus 139 i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~--- 211 (289)
+++++.+| ...+... +..++++++++||+ ||+++.. .++|++++. .++...
T Consensus 132 l~~~d~~g~~~~~~~~-----~~~pngi~~spdg~~lyv~~~~-----------------~~~i~~~~~d~~~G~~~~~~ 189 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQ-----VDISNGLDWSLDHKIFYYIDSL-----------------SYSVDAFDYDLQTGQISNRR 189 (297)
T ss_dssp EEEECTTSCEEEEEEE-----ESBEEEEEECTTSCEEEEEEGG-----------------GTEEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCEEEEeec-----cccccceEEcCCCCEEEEecCC-----------------CCcEEEEeccCCCCcccCcE
Confidence 89998667 5544332 34688999999995 9998753 367888764 445432
Q ss_pred Eee---CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeC-CCC-CEEEEEeCccc
Q 022967 212 ILL---DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDG-SFWIAILQVFI 286 (289)
Q Consensus 212 ~~~---~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~G-~lwv~~~~g~i 286 (289)
.+. .....|.|++++++|+ ||++....++|.+|+.++.++. ..+......|.++++. +++ .|||++...++
T Consensus 190 ~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~---~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~~ 265 (297)
T 3g4e_A 190 SVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRL---QTVKLPVDKTTSCCFGGKNYSEMYVTCARDGM 265 (297)
T ss_dssp EEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEE---EEEECSSSBEEEEEEESGGGCEEEEEEBCTTC
T ss_pred EEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEE---EEEECCCCCceEEEEeCCCCCEEEEEcCCcCC
Confidence 222 2235789999999996 9999988889999998632221 1121111467888986 454 79999987664
No 55
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.62 E-value=1.4e-14 Score=130.92 Aligned_cols=171 Identities=15% Similarity=0.129 Sum_probs=119.4
Q ss_pred ceeEeccCCcCCcceEEEccCCCEEEEecCC-eEEEEec-CCceEEeee---------ecCcCccCeEEcC----CCcEE
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGVLYTATRDG-WIKRLHK-NGTWENWKL---------IGGDTLLGITTTQ----ENEIL 131 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~l~v~~~~g-~i~~~~~-~g~~~~~~~---------~~~~p~~gl~~d~----~g~l~ 131 (289)
.++.+..+ +..|++|+++++|+|||++..+ +|++++. +|+.+.+.. ..+.++ ||++++ ++.||
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~lY 95 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYIY 95 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEEE
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEEE
Confidence 45666666 7999999999999999999775 7999984 576655432 123467 999998 68899
Q ss_pred EEeCC-------------CceEEEe-CC--C-e---EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccc-
Q 022967 132 VCDAD-------------KGLLKVT-EE--G-V---TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLD- 190 (289)
Q Consensus 132 v~~~~-------------~~i~~~~-~~--g-~---~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~- 190 (289)
++... .+|+|++ .+ + + +++....+....+.+.+|++++||+|||+.+.......+..+.
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccc
Confidence 98742 3688887 32 2 2 3444434444467789999999999999976421100000000
Q ss_pred --------------cceecCCCEEEEEeCCCC-----------eEEEeeCCCCCcceEEEecCCCEEEEEeCCCC
Q 022967 191 --------------LLEAKPHGKLLKYDPSLN-----------ETSILLDSLFFANGVALSKDEDYLVVCETFKF 240 (289)
Q Consensus 191 --------------~~~~~~~g~i~~~~~~~~-----------~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~ 240 (289)
--.....|+|+|+++++. ..++++.++++|.|++|+++++ ||++|.+.+
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~~ 249 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGPN 249 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECSS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCCC
Confidence 000123589999999865 4577889999999999999766 999997654
No 56
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.61 E-value=6.1e-14 Score=120.06 Aligned_cols=181 Identities=11% Similarity=0.091 Sum_probs=127.5
Q ss_pred cCCcceEEEccCCCEEEEe-cCCeEEEEecCCceEEeeee-----cCcCccCeEEcCCCcEEEEeC--------------
Q 022967 76 LNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWENWKLI-----GGDTLLGITTTQENEILVCDA-------------- 135 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~-~~g~i~~~~~~g~~~~~~~~-----~~~p~~gl~~d~~g~l~v~~~-------------- 135 (289)
...|.++++|++|+||+++ .+++|.+++.+|+.+.+... ...|. +++++++|++|++|.
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~~ 163 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPAD 163 (305)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCCC
T ss_pred CCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCC-CEEECCCCCEEEeCcCCCccccccccccc
Confidence 3568999999999999877 45789999977887665432 23577 999999999999752
Q ss_pred ----CCceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCC
Q 022967 136 ----DKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (289)
Q Consensus 136 ----~~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 208 (289)
..+|++++ .+| ++.+. . +..++++++++||+ ||+++.... ....+.|++++.+++
T Consensus 164 ~~~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~spdg~~lyv~~~~~~------------~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 164 PELAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSPDEQTLYVSQTPEQ------------GHGSVEITAFAWRDG 225 (305)
T ss_dssp CSSSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETT
T ss_pred cccCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcCCCCEEEEEecCCc------------CCCCCEEEEEEecCC
Confidence 14699999 467 66553 2 34688999999996 999875310 001257888886644
Q ss_pred eE---EEeeC-CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCC-CEEEEEeC
Q 022967 209 ET---SILLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAILQ 283 (289)
Q Consensus 209 ~~---~~~~~-~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwv~~~~ 283 (289)
.+ +.+.. ....|.|++++++|+ ||++. ..+|.+|+.++..+. .+ ..+..|.+++++.++ .||+++..
T Consensus 226 ~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~~~---~~--~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 226 ALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQLLG---HI--PTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCEEE---EE--ECSSCCCEEEECTTSCEEEEEETT
T ss_pred CccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCEEE---EE--ECCCceeEEEEeCCCCEEEEEcCC
Confidence 32 12222 245689999999999 99986 467999987654322 22 122358889987766 69999864
No 57
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.59 E-value=1.4e-13 Score=122.59 Aligned_cols=151 Identities=14% Similarity=0.147 Sum_probs=116.2
Q ss_pred cCCcCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCceEE-ee-eecCcCccCeEEcC-CCcEEEEeCC--CceEEEeCC
Q 022967 73 EGILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTWEN-WK-LIGGDTLLGITTTQ-ENEILVCDAD--KGLLKVTEE 145 (289)
Q Consensus 73 ~~~~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~~~-~~-~~~~~p~~gl~~d~-~g~l~v~~~~--~~i~~~~~~ 145 (289)
...+..|++|++|. +++||+++ .+++|.+++.+|+... +. .....|. +|++|+ .|.||+++.+ ..|++++.+
T Consensus 155 ~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~-~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 155 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEE-EEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcc-eEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 33478899999998 88999766 6789999998776433 32 2445799 999997 6789999964 469999966
Q ss_pred C--eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC---CCCC
Q 022967 146 G--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---SLFF 219 (289)
Q Consensus 146 g--~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~---~~~~ 219 (289)
| .+.+.. ..+..|++|++|+ +++|||+|.. ...|+++|.++...+.+.. .+..
T Consensus 234 G~~~~~~~~----~~l~~P~glavd~~~~~lY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~l~~ 292 (400)
T 3p5b_L 234 GVDIYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKRLAH 292 (400)
T ss_dssp SCSCEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCCCEEEEECSSTTSS
T ss_pred CCccEEEEE----CCCCceEEEEEEeCCCEEEEEECC-----------------CCEEEEEeCCCCccEEEEeCCCCCCC
Confidence 7 444433 2356899999997 5689999964 4689999998766555543 3678
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEe
Q 022967 220 ANGVALSKDEDYLVVCETFKFRCLKYWL 247 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~~~~~i~~~~~ 247 (289)
|.||+++ ++.|||++..+++|++++.
T Consensus 293 P~gl~v~--~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 293 PFSLAVF--EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp EEEEEEE--TTEEEEEESSSCSEEEEES
T ss_pred CEEEEEe--CCEEEEecCCCCeEEEEEc
Confidence 8999884 5679999999999999994
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.58 E-value=9e-13 Score=113.96 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=129.4
Q ss_pred CCcceEEEccCC-CEEEEec-------CCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC-CceEEEe-C
Q 022967 77 NGPEDVCVDRNG-VLYTATR-------DGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-E 144 (289)
Q Consensus 77 ~~p~~l~~d~~g-~l~v~~~-------~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~-~ 144 (289)
.+|..++++++| .+|++.. ++.|+.++ .+++..........+. +++++++|+ +|+++.. ..+..+| .
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 568899999976 5777663 46799999 4566555445566788 999999987 8888765 5688888 5
Q ss_pred CC-e-EEEEeccCC----ccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-C
Q 022967 145 EG-V-TVLASHVNG----SRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-S 216 (289)
Q Consensus 145 ~g-~-~~~~~~~~~----~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~ 216 (289)
++ . ..+...... .....+.+++++++|+ +|+++.. ..+.|+.+|.++++...... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCC
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCC
Confidence 66 3 333221110 0112367899999985 8887632 23679999998887665554 4
Q ss_pred CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeec-cCCCCCCceeeCCCCC-EEEEEeC
Q 022967 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE-NLPGGPDNIKLAPDGS-FWIAILQ 283 (289)
Q Consensus 217 ~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~-lwv~~~~ 283 (289)
...|.++++++|++.+|+++. .+.|++||..+.+......... .....+.+++++.+|+ +|++...
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 556899999999999999976 5889999976543221111111 1234567799999886 7887654
No 59
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=1.4e-13 Score=124.46 Aligned_cols=156 Identities=13% Similarity=0.120 Sum_probs=115.5
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEec--------CCce------------EEeeee--cCcCccCeEEcCCCc-E
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHK--------NGTW------------ENWKLI--GGDTLLGITTTQENE-I 130 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~--------~g~~------------~~~~~~--~~~p~~gl~~d~~g~-l 130 (289)
+.+|.++++++ +|.||+.+ .+++|++++. ++.. ..+... ...|. +|+++++|+ |
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~-~ia~~p~G~~l 324 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEF-QIFIHPTGKYA 324 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCE-EEEECTTSSEE
T ss_pred CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCce-EEEEcCCCCEE
Confidence 57899999999 88999776 6788999994 4543 122211 24577 999999998 8
Q ss_pred EEEeCC-CceEEEeCCC----e---EEEEec--cC--------CccccCcc-ceEEc-------CCCcEEEeeCCCccCc
Q 022967 131 LVCDAD-KGLLKVTEEG----V---TVLASH--VN--------GSRINLAD-DLIAA-------TDGSIYFSVASTKFGL 184 (289)
Q Consensus 131 ~v~~~~-~~i~~~~~~g----~---~~~~~~--~~--------~~~~~~~~-~l~~~-------~dG~lyv~~~~~~~~~ 184 (289)
||+|.. +.|++++.++ + ..++.. .. ...++.|. +++++ .+|.|||+|..
T Consensus 325 YvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~----- 399 (496)
T 3kya_A 325 YFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL----- 399 (496)
T ss_dssp EEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG-----
T ss_pred EEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC-----
Confidence 999976 6788877333 2 344432 11 12567898 78887 67899999964
Q ss_pred cccccccceecCCCEEEEEeCCCCeEEEeeC------------------------CCCCcceEEEecCCCEEEEEeCCCC
Q 022967 185 HNWGLDLLEAKPHGKLLKYDPSLNETSILLD------------------------SLFFANGVALSKDEDYLVVCETFKF 240 (289)
Q Consensus 185 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~------------------------~~~~p~gl~~~~d~~~l~v~~~~~~ 240 (289)
+.+|.+++++ |.+..++. .+..|.||+++++++.|||+|+.++
T Consensus 400 ------------N~rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~ 466 (496)
T 3kya_A 400 ------------NFCVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGH 466 (496)
T ss_dssp ------------GTEEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred ------------CCEEEEEeCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCC
Confidence 4689999976 56655531 1567999999998556999999999
Q ss_pred eEEEEEecCC
Q 022967 241 RCLKYWLKGE 250 (289)
Q Consensus 241 ~i~~~~~~~~ 250 (289)
+|++++++++
T Consensus 467 rIrki~~~~~ 476 (496)
T 3kya_A 467 TIRTISMEQE 476 (496)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEECCCC
Confidence 9999998864
No 60
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.57 E-value=9.4e-13 Score=113.83 Aligned_cols=182 Identities=13% Similarity=0.184 Sum_probs=128.8
Q ss_pred cceEEEccCCC-EEEEe--cCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCc-EEEEeCCCceEEEe-CCC-eEEE
Q 022967 79 PEDVCVDRNGV-LYTAT--RDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG-VTVL 150 (289)
Q Consensus 79 p~~l~~d~~g~-l~v~~--~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g-~~~~ 150 (289)
|++++++++|+ +|++. .++.|+.++ .+++...... ....+. +++++++|+ ||+++....++.+| .++ ....
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST-GLALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC-CCEEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc-eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 78899999876 77776 368899999 4555443333 344578 999999886 78887666788999 666 3322
Q ss_pred EeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCC
Q 022967 151 ASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~ 229 (289)
...........+.+++++|||+ +|+++.. .+.|+.+|.++++...... ...+.++++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~-~~~~~~~~~s~dg 283 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSK-----------------AAEVLVVDTRNGNILAKVA-APESLAVLFNPAR 283 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESS-----------------SSEEEEEETTTCCEEEEEE-CSSCCCEEEETTT
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEEEEEE-cCCCceEEECCCC
Confidence 2211111234577899999986 8887643 3689999998776544332 2346789999999
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEeC
Q 022967 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQ 283 (289)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~ 283 (289)
+++|+++...+.|.+||..+.+.. ..+ ..+..|.+++++.+|+ +|++...
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~~~~~--~~~--~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKSYKVV--KTF--DTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEE--EEE--ECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CEEEEEECCCCeEEEEECCCCeEE--EEE--ecCCCCCeEEEcCCCCEEEEEEcc
Confidence 999999988899999997653221 112 2235688999999996 8998866
No 61
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=2.6e-13 Score=118.26 Aligned_cols=186 Identities=12% Similarity=0.178 Sum_probs=127.5
Q ss_pred CcCCcceEEEccCCCEEEEec------CCeEEEEe-cCCce-EEeeee------cCcCccCeEEcC-CCcEEEEeC---C
Q 022967 75 ILNGPEDVCVDRNGVLYTATR------DGWIKRLH-KNGTW-ENWKLI------GGDTLLGITTTQ-ENEILVCDA---D 136 (289)
Q Consensus 75 ~~~~p~~l~~d~~g~l~v~~~------~g~i~~~~-~~g~~-~~~~~~------~~~p~~gl~~d~-~g~l~v~~~---~ 136 (289)
.+..|.++++|++|+||+.+. .++|++++ .+|+. ..+... ...+. ++++|+ +|.+|+++. .
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN-DLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC-EEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc-eEEEecCCCEEEEEcCccCC
Confidence 367899999999999997663 47899999 45763 333221 12467 999995 578999986 3
Q ss_pred -CceEEEe-CCC-eEEEEec------------cCCccc-------------cCccceEEcCCC-cEEEeeCCCccCcccc
Q 022967 137 -KGLLKVT-EEG-VTVLASH------------VNGSRI-------------NLADDLIAATDG-SIYFSVASTKFGLHNW 187 (289)
Q Consensus 137 -~~i~~~~-~~g-~~~~~~~------------~~~~~~-------------~~~~~l~~~~dG-~lyv~~~~~~~~~~~~ 187 (289)
.+|++++ .+| ...+... ..+..+ ..+++|++++|| .||+++..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~-------- 215 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH-------- 215 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS--------
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC--------
Confidence 6788999 556 4333211 011111 246899999999 59998764
Q ss_pred ccccceecCCCEEEEEeCC---CCe---------EEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEe-cCCCCcc
Q 022967 188 GLDLLEAKPHGKLLKYDPS---LNE---------TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWL-KGESKEQ 254 (289)
Q Consensus 188 ~~~~~~~~~~g~i~~~~~~---~~~---------~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~-~~~~~~~ 254 (289)
...|++++.+ .+. +... .....|.|++++++|+ +|+++...++|.+|+. ++.
T Consensus 216 ---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~---- 280 (343)
T 2qe8_A 216 ---------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRA---- 280 (343)
T ss_dssp ---------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTE----
T ss_pred ---------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCC----
Confidence 2478988742 111 1111 1234789999999986 9999999999999997 442
Q ss_pred eeeeec-cCCCCCCceeeCCCCCEEEEEeCc
Q 022967 255 TEIFVE-NLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 255 ~~~~~~-~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
...... .....|.+++++.+|++||++...
T Consensus 281 ~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 281 YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred EEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 222221 112579999999999999998643
No 62
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.56 E-value=6.9e-13 Score=114.81 Aligned_cols=183 Identities=10% Similarity=0.032 Sum_probs=128.7
Q ss_pred CCcceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEe-CCCceEEEe-CCC-eEEEE
Q 022967 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG-VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g-~~~~~ 151 (289)
..|++++++ ++++|++. .++.|.++| .+++..........|. +++++++|++|+++ ....|.++| .++ +....
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 457889886 67899766 568999999 4576543334456788 99998788999998 557799999 666 43222
Q ss_pred e-ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCC
Q 022967 152 S-HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED 230 (289)
Q Consensus 152 ~-~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~ 230 (289)
. .........|.+|++ .++++|+++.. ..+.|.++|+++++..........|++++++++|+
T Consensus 122 ~~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~ 184 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK 184 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE
T ss_pred EcCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC
Confidence 2 111122346889999 67899999742 13689999999887665444456799999999988
Q ss_pred EEEEEeCCC----------CeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCC-CEEEEE
Q 022967 231 YLVVCETFK----------FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAI 281 (289)
Q Consensus 231 ~l~v~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwv~~ 281 (289)
+|++..+. +.|+++|.++.++.. .+.......|.+++++.+| .+|++.
T Consensus 185 -l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~--~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 185 -MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK--QFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp -EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE--EEECCTTCCCEEEEECTTSCEEEEES
T ss_pred -EEEEECCCccCCccccCCceEEEEECCCCeEEE--EEecCCCCCceeEEEecCCCEEEEEc
Confidence 88887765 789999976543221 1211112469999999866 677764
No 63
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=4.9e-13 Score=115.29 Aligned_cols=181 Identities=14% Similarity=0.140 Sum_probs=125.0
Q ss_pred CCcceEEEccCCCEEEEecC-----CeEEEEecCC-ceEEeee---ecCcCccCeEEcCCCcEEEEeCC-------CceE
Q 022967 77 NGPEDVCVDRNGVLYTATRD-----GWIKRLHKNG-TWENWKL---IGGDTLLGITTTQENEILVCDAD-------KGLL 140 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~-----g~i~~~~~~g-~~~~~~~---~~~~p~~gl~~d~~g~l~v~~~~-------~~i~ 140 (289)
..|.+++++++|++|++... ++|++++.++ ....+.. ....+. +++++++|++|+++.. .+|+
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID-DMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE-EEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc-ceEECCCCCEEEEeccccccCCCceEE
Confidence 56899999999999987743 4899999544 4442321 223567 8999999999999763 4699
Q ss_pred EEeC-CC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCC--CeEEEe--
Q 022967 141 KVTE-EG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL--NETSIL-- 213 (289)
Q Consensus 141 ~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~--~~~~~~-- 213 (289)
+++. .+ ++.+... ...++++++++||+ ||+++.. .+.|++++.++ +....+
T Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~-----------------~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQN-----ISVANGIALSTDEKVLWVTETT-----------------ANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp EECTTSCCEEEEEEE-----ESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSSSEEEEEE
T ss_pred EEeCCCCEEEEeecC-----CCcccceEECCCCCEEEEEeCC-----------------CCeEEEEEecCCCcCcccccc
Confidence 9994 45 5544321 23578999999996 9998642 35788888742 223211
Q ss_pred ---e--CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCC-----CCCCceeeCCCC-CEEEEEe
Q 022967 214 ---L--DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLP-----GGPDNIKLAPDG-SFWIAIL 282 (289)
Q Consensus 214 ---~--~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~p~~i~~d~~G-~lwv~~~ 282 (289)
. .+...|.+++++++|+ +|+++...++|.+|+.++..+ ..+..... ..|.+++++++| .||+++.
T Consensus 224 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~~~---~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 224 TIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGYPI---GQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSCEE---EEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred eEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCCEE---EEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 1 1234789999999988 999987778999998754322 22211110 158899998886 8999987
Q ss_pred Cc
Q 022967 283 QV 284 (289)
Q Consensus 283 ~g 284 (289)
.+
T Consensus 300 ~g 301 (333)
T 2dg1_A 300 DI 301 (333)
T ss_dssp CG
T ss_pred cc
Confidence 65
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.53 E-value=2.8e-12 Score=111.19 Aligned_cols=189 Identities=14% Similarity=0.199 Sum_probs=124.9
Q ss_pred cCCcceEEEccCCCEEEEec---CCeEEEEe-cCCceEEee---eecCcCccCeEEcCCCc-EEEEeCC-CceEEEe--C
Q 022967 76 LNGPEDVCVDRNGVLYTATR---DGWIKRLH-KNGTWENWK---LIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT--E 144 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~---~g~i~~~~-~~g~~~~~~---~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~--~ 144 (289)
...|..++++++|+||+... ++.|+.++ .+|+.+.+. .....|. +++++++|+ ||+++.. ..+..++ .
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 47799999999999997664 57899998 456544332 2456788 999999997 7887744 3455555 4
Q ss_pred CC-eEEEEec-cCCc------cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCC-CCeEEEe--
Q 022967 145 EG-VTVLASH-VNGS------RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LNETSIL-- 213 (289)
Q Consensus 145 ~g-~~~~~~~-~~~~------~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~-- 213 (289)
+| .+.+... ..+. ....+..++++|||++|+++.. .+.|+.++.+ ++++...
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEeee
Confidence 55 4443321 1111 1224668999999999888753 3466666655 4554432
Q ss_pred --eCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC--CCcceeeeeccCC------CCCCceeeCCCCC-EEEEEe
Q 022967 214 --LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQTEIFVENLP------GGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 214 --~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~------~~p~~i~~d~~G~-lwv~~~ 282 (289)
......|.+++|+|||+++|+++...+.|.+|+++.. .+....... ..+ ..|.+++++++|+ +|++..
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 1233468889999999999999988899999988742 221111111 111 2366799999996 778765
Q ss_pred C
Q 022967 283 Q 283 (289)
Q Consensus 283 ~ 283 (289)
.
T Consensus 260 ~ 260 (347)
T 3hfq_A 260 G 260 (347)
T ss_dssp T
T ss_pred C
Confidence 3
No 65
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.53 E-value=6e-13 Score=127.52 Aligned_cols=176 Identities=14% Similarity=0.115 Sum_probs=126.1
Q ss_pred EEEccCCCEEEEecCCeEEEEecCC-ceEEeeeecCcCccCeEEcC-CCcEEEEeCC-CceEEEeCCC------eEEEEe
Q 022967 82 VCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG------VTVLAS 152 (289)
Q Consensus 82 l~~d~~g~l~v~~~~g~i~~~~~~g-~~~~~~~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~~~g------~~~~~~ 152 (289)
.+++....|+++.. ..|.+++.++ ....+......+. +|++|. +++||+++.. +.|++++.+| .+.++.
T Consensus 390 ~~~~~~p~Ll~an~-~~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 390 KAVGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp EETTSCCEEEEECB-SSEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred eecccccccccccc-cceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 34444445666554 4588887443 4555555567788 999996 6789999976 4588887433 222222
Q ss_pred ccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEEecCCC
Q 022967 153 HVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDED 230 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d~~ 230 (289)
..+..|.+|++|..+ +|||++.. .++|.+++.++...+.+. ..+..|.+|++++.++
T Consensus 468 ----~~l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 468 ----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp ----SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred ----cCCCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC
Confidence 235679999999865 89999965 478999999876655554 5788899999999988
Q ss_pred EEEEEeCCC-CeEEEEEecCCCCcceeeeeccCCCCCCceeeC-CCCCEEEEEeC
Q 022967 231 YLVVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDGSFWIAILQ 283 (289)
Q Consensus 231 ~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~lwv~~~~ 283 (289)
.|||+|.+. .+|++++++|.. ...++...-..|.+|++| .+|+||++...
T Consensus 527 ~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 527 FMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp EEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CEEEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 899999876 899999998743 223333223579999999 56789999754
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.53 E-value=4.5e-12 Score=109.86 Aligned_cols=190 Identities=16% Similarity=0.133 Sum_probs=123.4
Q ss_pred cCCcceEEEccCCC-EEEEe-cCCeEEEEe--cCCceEEeeeec------------CcCccCeEEcCCCcEEEEeCCC-c
Q 022967 76 LNGPEDVCVDRNGV-LYTAT-RDGWIKRLH--KNGTWENWKLIG------------GDTLLGITTTQENEILVCDADK-G 138 (289)
Q Consensus 76 ~~~p~~l~~d~~g~-l~v~~-~~g~i~~~~--~~g~~~~~~~~~------------~~p~~gl~~d~~g~l~v~~~~~-~ 138 (289)
...|.+++++++|+ ||++. .++.|..++ .+|....+.... ..+. +++++++|++|+++... .
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCEEEEETTTTE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcEEEEeCCCCE
Confidence 46799999999987 77776 668888887 456554332211 1245 69999999999988653 4
Q ss_pred eEEEe-C-CC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee
Q 022967 139 LLKVT-E-EG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214 (289)
Q Consensus 139 i~~~~-~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 214 (289)
+..++ . +| +..+... .......+.+++++|||+ +|+++... ..-.+|.++..+++.+...
T Consensus 164 v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~~---------------~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGELS---------------SQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp EEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTT---------------TEEEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCCC---------------CEEEEEEecCCCCceEEee
Confidence 76677 4 56 5443221 111123577899999997 88876431 1123555565456654321
Q ss_pred ---CC------CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC-CCcceeeeeccCCCCCCceeeCCCCC-EEEEEeC
Q 022967 215 ---DS------LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE-SKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQ 283 (289)
Q Consensus 215 ---~~------~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~ 283 (289)
.. ...+.+++|+|||++||+++...+.|.+|+++.. .......+. .....|.+++++++|+ ||++...
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEETT
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEEcC
Confidence 11 1347789999999999999988899999998632 222122221 2234689999999996 7777654
No 67
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.52 E-value=4.7e-12 Score=108.68 Aligned_cols=176 Identities=12% Similarity=0.125 Sum_probs=118.5
Q ss_pred ceEEEccCCCEEEEecCCeEEEEecCCceEEeeee-cCcCccCeEEcCCCcEEEEeCCCceEEEeCCC-eEEEEeccCCc
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLI-GGDTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHVNGS 157 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~~~g~~~~~~~~-~~~p~~gl~~d~~g~l~v~~~~~~i~~~~~~g-~~~~~~~~~~~ 157 (289)
.+++++++|+||+++.++.|++++.+|+....... ..... .+.+|.+|.||++. .++++++.+| ...... ..
T Consensus 140 ~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~-~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~-~~-- 213 (330)
T 3hxj_A 140 ATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITS-AASIGKDGTIYFGS--DKVYAINPDGTEKWNFY-AG-- 213 (330)
T ss_dssp SCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCS-CCEECTTCCEEEES--SSEEEECTTSCEEEEEC-CS--
T ss_pred eeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCcee-eeEEcCCCEEEEEe--CEEEEECCCCcEEEEEc-cC--
Confidence 44678888999999888889999966654322222 22344 78888889999988 7899999666 322211 11
Q ss_pred cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeC
Q 022967 158 RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237 (289)
Q Consensus 158 ~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~ 237 (289)
......++++++|+||++... ++|+++++++.....+.........+.+++++. ||++.
T Consensus 214 -~~~~~~~~~~~~g~l~v~t~~------------------~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t- 272 (330)
T 3hxj_A 214 -YWTVTRPAISEDGTIYVTSLD------------------GHLYAINPDGTEKWRFKTGKRIESSPVIGNTDT-IYFGS- 272 (330)
T ss_dssp -SCCCSCCEECTTSCEEEEETT------------------TEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEEC-
T ss_pred -CcceeceEECCCCeEEEEcCC------------------CeEEEECCCCCEeEEeeCCCCccccceEcCCCe-EEEec-
Confidence 134668889999999998643 689999887655544444333445567776665 99884
Q ss_pred CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 238 FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 238 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
..+.|++|+.++... ..+. ........+.+|.+|++|+++.+|.+
T Consensus 273 ~~ggl~~~d~~g~~~---~~~~-~~~~~~~~~~~d~~g~l~~gt~~G~~ 317 (330)
T 3hxj_A 273 YDGHLYAINPDGTEK---WNFE-TGSWIIATPVIDENGTIYFGTRNGKF 317 (330)
T ss_dssp TTCEEEEECTTSCEE---EEEE-CSSCCCSCCEECTTCCEEEECTTSCE
T ss_pred CCCCEEEECCCCcEE---EEEE-cCCccccceEEcCCCEEEEEcCCCeE
Confidence 456899998543211 1111 11234567889999999999988765
No 68
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.51 E-value=8.1e-13 Score=114.30 Aligned_cols=180 Identities=11% Similarity=0.076 Sum_probs=125.8
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeeec-----CcCccCeEEcCCCcEEEEeCC-------CceEEEe
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIG-----GDTLLGITTTQENEILVCDAD-------KGLLKVT 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~-----~~p~~gl~~d~~g~l~v~~~~-------~~i~~~~ 143 (289)
..+.+++++++|++|+++. ++|++++ .+|++..+.... ..+. ++++|++|++|+++.. .+|++++
T Consensus 90 ~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 4578899999999998874 4599999 467766554321 2456 8999999999998742 4699998
Q ss_pred CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCC--CC-eE---EEee-
Q 022967 144 EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS--LN-ET---SILL- 214 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~~-~~---~~~~- 214 (289)
+| ++.+... ...++++++++||+ +|+++.. .+.|++++.+ ++ .. ..+.
T Consensus 168 -~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 168 -KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp -TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEETT-----------------TCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred -CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEECC-----------------CCEEEEEEcccccCCcccCceEEEE
Confidence 77 6554322 23578999999995 8998753 3678999864 45 31 2221
Q ss_pred --CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeC-CCC-CEEEEEeCccc
Q 022967 215 --DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDG-SFWIAILQVFI 286 (289)
Q Consensus 215 --~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~G-~lwv~~~~g~i 286 (289)
.....|.+++++++|+ +|++....++|++|+.++... ..+. .....|.+++++ +++ .|||++..++.
T Consensus 225 ~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~~~---~~i~-~~~~~~~~~af~g~d~~~L~vt~~~~~~ 295 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGNHI---ARYE-VPGKQTTCPAFIGPDASRLLVTSAREHL 295 (326)
T ss_dssp CTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCCEE---EEEE-CSCSBEEEEEEESTTSCEEEEEEBCTTC
T ss_pred CCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCCEE---EEEE-CCCCCcEEEEEecCCCCEEEEEecCCCC
Confidence 1235689999999997 999987778999998754321 1121 112357788887 564 79999877653
No 69
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.51 E-value=6.5e-13 Score=119.95 Aligned_cols=166 Identities=16% Similarity=0.260 Sum_probs=110.4
Q ss_pred eeEeccCCcCCcceEEEccCCC--EEEEecCCeEEEEecCCce--EEe-------eee-----cCcCccCeEEcCC----
Q 022967 68 VTRLGEGILNGPEDVCVDRNGV--LYTATRDGWIKRLHKNGTW--ENW-------KLI-----GGDTLLGITTTQE---- 127 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~g~--l~v~~~~g~i~~~~~~g~~--~~~-------~~~-----~~~p~~gl~~d~~---- 127 (289)
++.++.+ +..|+.|+++++|. |||+...|+|++++.+|.. +.+ ... .+..+ ||+++++
T Consensus 6 v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~n 83 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHHH
T ss_pred EEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcCC
Confidence 4566666 89999999999885 9999999999999866542 111 111 23456 8999975
Q ss_pred CcEEEEeCC-------------CceEEEe-CC--------C-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCc
Q 022967 128 NEILVCDAD-------------KGLLKVT-EE--------G-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGL 184 (289)
Q Consensus 128 g~l~v~~~~-------------~~i~~~~-~~--------g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~ 184 (289)
+.|||+... .+|.|+. .+ . .+++.........+....|+++|||.|||+.+..-...
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~ 163 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITL 163 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCH
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCC
Confidence 789997421 2576765 21 1 23443322223446677899999999999977521100
Q ss_pred --cccccccceecCCCEEEEEeCCCC--------------------eEEEeeCCCCCcceEEEecCC-----C-EEEEEe
Q 022967 185 --HNWGLDLLEAKPHGKLLKYDPSLN--------------------ETSILLDSLFFANGVALSKDE-----D-YLVVCE 236 (289)
Q Consensus 185 --~~~~~~~~~~~~~g~i~~~~~~~~--------------------~~~~~~~~~~~p~gl~~~~d~-----~-~l~v~~ 236 (289)
....++ .....|.|+|++++++ ..++++.++++|.|++|+++. + ++|++|
T Consensus 164 ~~~~~~q~--~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D 241 (463)
T 2wg3_C 164 DDMEEMDG--LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSD 241 (463)
T ss_dssp HHHHHCTT--CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEEC
T ss_pred CccccccC--cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecc
Confidence 000001 1234689999999963 346788999999999999973 2 677787
Q ss_pred C
Q 022967 237 T 237 (289)
Q Consensus 237 ~ 237 (289)
.
T Consensus 242 ~ 242 (463)
T 2wg3_C 242 S 242 (463)
T ss_dssp C
T ss_pred c
Confidence 5
No 70
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.50 E-value=2.1e-12 Score=110.60 Aligned_cols=182 Identities=14% Similarity=0.112 Sum_probs=125.0
Q ss_pred CCcceEEEccCCCEEEEecC---CeEEEEe-cCCceEEeeee--cCcCccCeEEcCCCcEEEEeCC-CceEEEeC-CC-e
Q 022967 77 NGPEDVCVDRNGVLYTATRD---GWIKRLH-KNGTWENWKLI--GGDTLLGITTTQENEILVCDAD-KGLLKVTE-EG-V 147 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~---g~i~~~~-~~g~~~~~~~~--~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~-~g-~ 147 (289)
..|.+++++++|+||+++.. .+|++++ .+|++..+... ...+. |++...++++|+++.. ..|++++. .+ .
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~-g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLN-GITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEE-EEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccC-cccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 46999999999999988732 3588887 67887665442 23456 8887777789999853 56999994 44 3
Q ss_pred EEEEe-c-----cCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCC-Ce---EEEeeCC
Q 022967 148 TVLAS-H-----VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NE---TSILLDS 216 (289)
Q Consensus 148 ~~~~~-~-----~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~~---~~~~~~~ 216 (289)
++... . .....+..+++| ++|| .||+++.. .++|++++.++ ++ .+.+..
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~-----------------~~~I~~~~~~~~g~~~~~~~~~~- 210 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE-----------------KMLLLRIPVDSTDKPGEPEIFVE- 210 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-----------------TTEEEEEEBCTTSCBCCCEEEEE-
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-----------------CCEEEEEEeCCCCCCCccEEEec-
Confidence 33211 1 111234578888 6666 79999864 46899999764 32 223322
Q ss_pred CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCC-CCCCceeeC---CC-CCEEEEEeC
Q 022967 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLP-GGPDNIKLA---PD-GSFWIAILQ 283 (289)
Q Consensus 217 ~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~p~~i~~d---~~-G~lwv~~~~ 283 (289)
+..|.|++++++|+ +|+++..+++|.+|+.+|. ...... + ..+ ..|.+++++ ++ +.|||++..
T Consensus 211 ~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G~-~~~~~~-~-~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 211 QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDRS-TTIIAQ-A-EQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp SCCCSSEEEBTTCC-EEEECBTTCCEEEECTTCC-EEEEEC-G-GGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCCCCeEECCCCC-EEEEeCCCCeEEEECCCCC-EEEEee-c-ccccCCceEEEEecccCCCCEEEEECCC
Confidence 35799999999997 8999999999999987653 111101 1 122 569999997 56 589999875
No 71
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.50 E-value=1.2e-11 Score=102.69 Aligned_cols=191 Identities=15% Similarity=0.145 Sum_probs=129.1
Q ss_pred cCCcceEEEcc-CCCEE-EEecCCeEEEEecCCceEEeee--ecCcCccCeEEcCCCcEEEEeCC-CceEEEe--CCC-e
Q 022967 76 LNGPEDVCVDR-NGVLY-TATRDGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVT--EEG-V 147 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~-v~~~~g~i~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~--~~g-~ 147 (289)
...+.++++++ ++.|| +.+.+++|++++.+|++..-.. ....+- ||+++.+|.+||++.. ++++.++ .++ +
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 46799999998 46799 5678899999997787654332 234567 9999999999898754 5677776 344 3
Q ss_pred EEEEec-cC---CccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeC--CCCeEEEee------
Q 022967 148 TVLASH-VN---GSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP--SLNETSILL------ 214 (289)
Q Consensus 148 ~~~~~~-~~---~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~~~~------ 214 (289)
..+... .+ ........+|++++++ +||++... ....||.++. .+..+.+..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~~~~~ 168 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDKALQR 168 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECHHHHH
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecchhhcc
Confidence 332211 11 1122345799999977 79998643 1236888872 222333331
Q ss_pred -CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeecc---C---CCCCCceeeCCCCCEEEEEeCc
Q 022967 215 -DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN---L---PGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 215 -~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~---~---~~~p~~i~~d~~G~lwv~~~~g 284 (289)
.....+.+++++|..++||+....++.|..+|.+|.-.. .-.+... + -..|.||++|.+|++||+.-..
T Consensus 169 ~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~-~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 169 QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG-EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE-EEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEE-EEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 135578999999999999999999999999998875221 1111111 1 1268999999999999997543
No 72
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.49 E-value=1.8e-12 Score=125.04 Aligned_cols=184 Identities=11% Similarity=0.176 Sum_probs=127.8
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCceEEeeee---------cCcCccCeEEcCCCc-EEEEeCCCceEEEe-CCC
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI---------GGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG 146 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~---------~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g 146 (289)
..+++.|++|+||+++.+++|.+++. .+++..+... ..... +++.|++|+ ||++..+.|+++++ .++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 45688999999999998888999994 5666655321 12234 788889999 99998778999999 556
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-----C--C
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-----L--F 218 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-----~--~ 218 (289)
++.+...........+.++..+++|+||++.. ++|+++++++++++.+... + .
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------SALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------------------SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------------------CceeEEeCCCCeEEEccccccccccCCc
Confidence 66554321112234567899999999999963 3699999998887766422 1 2
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeee-e-ccCC-CCCCceeeCCCCCEEEEEeCcccc
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIF-V-ENLP-GGPDNIKLAPDGSFWIAILQVFIS 287 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~-~~~~-~~p~~i~~d~~G~lwv~~~~g~i~ 287 (289)
....+..+++++ +|++.. ++|++|+.++... ..... . ..++ .....|..|.+|++|+++.+ |+.
T Consensus 499 ~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~ 565 (795)
T 4a2l_A 499 QITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFY 565 (795)
T ss_dssp CEEEEEECTTCC-EEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEE
T ss_pred eEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-Cce
Confidence 345677788887 999865 6899999876433 11100 0 0111 23455889999999999986 553
No 73
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.49 E-value=5.2e-12 Score=110.59 Aligned_cols=186 Identities=11% Similarity=0.059 Sum_probs=122.3
Q ss_pred cCCcceEEEccC----CCEEEEecC--------CeEEEEecCCc------eEEeee--e---cCcCccCeEEcCCCcEEE
Q 022967 76 LNGPEDVCVDRN----GVLYTATRD--------GWIKRLHKNGT------WENWKL--I---GGDTLLGITTTQENEILV 132 (289)
Q Consensus 76 ~~~p~~l~~d~~----g~l~v~~~~--------g~i~~~~~~g~------~~~~~~--~---~~~p~~gl~~d~~g~l~v 132 (289)
..+|.+|+++++ |.||++... ++|.+++.++. .+.+.. . ...+. +|++++||+||+
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~-~l~~~pDG~Lyv 150 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGG-RIRFGPDGMLYI 150 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCC-CEEECTTSCEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCc-eEEECCCCcEEE
Confidence 467999999996 899987642 68999984432 222211 1 12466 899999999999
Q ss_pred EeCC--------------CceEEEeCCC-e---------EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCcccc
Q 022967 133 CDAD--------------KGLLKVTEEG-V---------TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNW 187 (289)
Q Consensus 133 ~~~~--------------~~i~~~~~~g-~---------~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~ 187 (289)
+... ..|+|++.+| + +++. ..++.|.+|++++ +|+||+++.....
T Consensus 151 t~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-----~G~rnp~Gla~d~~~g~l~v~d~g~~~----- 220 (354)
T 3a9g_A 151 TTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWS-----YGHRNPQGIDWHRASGVMVATEHGPVG----- 220 (354)
T ss_dssp ECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-----ECCSCCCEEEECTTTCCEEEEECCSSS-----
T ss_pred EECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-----EccCCcceEEEeCCCCCEEEEecCCCC-----
Confidence 8531 2588888656 3 2222 1356799999999 7999999865210
Q ss_pred ccccceecCCCEEEEEeCCC--------------CeE---EEeeCCCCCcceEEEe-------cCCCEEEEEeCCCCeEE
Q 022967 188 GLDLLEAKPHGKLLKYDPSL--------------NET---SILLDSLFFANGVALS-------KDEDYLVVCETFKFRCL 243 (289)
Q Consensus 188 ~~~~~~~~~~g~i~~~~~~~--------------~~~---~~~~~~~~~p~gl~~~-------~d~~~l~v~~~~~~~i~ 243 (289)
...|.++.+.. +.. ..+......|.|+++. .+| .+|+++...++|+
T Consensus 221 ---------~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~ 290 (354)
T 3a9g_A 221 ---------HDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLA 290 (354)
T ss_dssp ---------CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEE
T ss_pred ---------CcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEE
Confidence 11233333210 000 0110223468899984 355 5999999999999
Q ss_pred EEEecCC-CCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 244 KYWLKGE-SKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 244 ~~~~~~~-~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
++++++. .....+.+.....+.|.+++++.||.|||++.
T Consensus 291 ~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 291 AVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 9999753 23223444433346799999999999999996
No 74
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=1.4e-12 Score=125.66 Aligned_cols=186 Identities=12% Similarity=0.140 Sum_probs=125.3
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCceEEeeee----------cCcCccCeEEcCCCcEEEEeCCCceEEEeC-CC
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI----------GGDTLLGITTTQENEILVCDADKGLLKVTE-EG 146 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~----------~~~p~~gl~~d~~g~l~v~~~~~~i~~~~~-~g 146 (289)
..++..|++|+||+++.+++|.+++. .+.+..+... ..... +++.|++|+||++....||++++. .+
T Consensus 315 v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 315 ARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS-SVCDDGQGKLWIGTDGGGINVFENGKR 393 (781)
T ss_dssp EEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE-EEEECTTSCEEEEEBSSCEEEEETTEE
T ss_pred EEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE-EEEEcCCCCEEEEeCCCcEEEEECCCC
Confidence 45688999999999998888999984 4455544321 12234 788899999999987789999994 34
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC---CCCcce
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---LFFANG 222 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~---~~~p~g 222 (289)
++.+.. ........+.+|+.+++|+||++... ++|+++++++++++.+... ......
T Consensus 394 ~~~~~~~-~~~~~~~~v~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 394 VAIYNKE-NRELLSNSVLCSLKDSEGNLWFGTYL------------------GNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEECC------CCCSBEEEEEECTTSCEEEEETT------------------EEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred eEEEccC-CCCCCCcceEEEEECCCCCEEEEecc------------------CCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 443321 11122245678999999999998642 5799999988887766431 223455
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeee-cc-CCCCCCceeeCCCCCEEEEEeCcccc
Q 022967 223 VALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV-EN-LPGGPDNIKLAPDGSFWIAILQVFIS 287 (289)
Q Consensus 223 l~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~-~~~~p~~i~~d~~G~lwv~~~~g~i~ 287 (289)
+..+++++ ||++.. .+|++|+..+.......... .. .......|++|.+|+||+|+.++|+.
T Consensus 455 i~~d~~g~-lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~ 518 (781)
T 3v9f_A 455 FYEDKNKK-IWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVG 518 (781)
T ss_dssp EEECTTSE-EEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEE
T ss_pred EEECCCCC-EEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEE
Confidence 66676665 999854 78999997754432221100 00 12345678999999999999866653
No 75
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.45 E-value=5.9e-12 Score=121.50 Aligned_cols=185 Identities=12% Similarity=0.102 Sum_probs=125.5
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCceEEeeee-------cCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eE
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI-------GGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VT 148 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~-------~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~ 148 (289)
-.++..|++|+||+++.+++|.+++. .+.+..+... ..... ++..|++|+||++....||.+++ ..+ ++
T Consensus 312 i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~-~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 312 VRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVS-CIVEDKDKNLWIGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEE-EEEECTTSCEEEEESSSCEEEECTTTCCEE
T ss_pred EEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeE-EEEECCCCCEEEEECCCCeEEEcCCCCcEE
Confidence 45689999999999998888999984 4455544321 12234 78889999999998777999999 556 66
Q ss_pred EEEeccC----CccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-----CC
Q 022967 149 VLASHVN----GSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-----LF 218 (289)
Q Consensus 149 ~~~~~~~----~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-----~~ 218 (289)
.+..... +.....+.+++.+++|+ ||++... ++|+++|++++++..+... ..
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~------------------~Gl~~~d~~~~~~~~~~~~~~~l~~~ 452 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHA------------------GGLSILHRNSGQVENFNQRNSQLVNE 452 (795)
T ss_dssp EECCC------CCSCSCEEEEEEETTTTEEEEEETT------------------TEEEEEETTTCCEEEECTTTSCCSCS
T ss_pred EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCc------------------CceeEEeCCCCcEEEeecCCCCcCCC
Confidence 5532210 11234567899999999 9998643 5799999998887766431 12
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeee--ccC-CCCCCceeeCCCCCEEEEEeCccc
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV--ENL-PGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~-~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
....+..+++++ ||++.. .+|++|+.++.......... ..+ ......+..|.+|++|+|+. +|+
T Consensus 453 ~v~~i~~d~~g~-lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl 519 (795)
T 4a2l_A 453 NVYAILPDGEGN-LWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGL 519 (795)
T ss_dssp CEEEEEECSSSC-EEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCE
T ss_pred eeEEEEECCCCC-EEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cce
Confidence 345567777777 999864 68999997653221111000 011 12345688999999999997 554
No 76
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=4.8e-12 Score=121.89 Aligned_cols=182 Identities=13% Similarity=0.091 Sum_probs=125.4
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCceEEeeee---cCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEe
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI---GGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~---~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~ 152 (289)
..+++.|++|+||+++..++|++++. +++++.+... ..... .+..|++|+||++.. .|+++++ .++ ++.+..
T Consensus 409 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~ 486 (781)
T 3v9f_A 409 VLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR-VFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYD 486 (781)
T ss_dssp EEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE-EEEECTTSEEEEEET-TEEEEEESSSSSCCEEEC
T ss_pred eEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE-EEEECCCCCEEEEEC-CceEEEeCCCCeEEeccc
Confidence 45688899999999998788999984 4666655421 22344 788899999999987 8999999 556 655433
Q ss_pred cc-CCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC--CCC--CcceEEEec
Q 022967 153 HV-NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--SLF--FANGVALSK 227 (289)
Q Consensus 153 ~~-~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--~~~--~p~gl~~~~ 227 (289)
.. .......+.+|+.|++|+||++... ++|+++++++++++.+.. ++. ....+..++
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 548 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWIGTFG------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS 548 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEEEESS------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECT
T ss_pred CcccccccceeEEEEEcCCCCEEEEEcC------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC
Confidence 21 1111245678999999999999742 469999998887776643 222 235667777
Q ss_pred CCCEEEEEeCCCCeE-EEEEecCCCCcceeeeeccCC-CCCCceeeCCCCCEEEEEeCc
Q 022967 228 DEDYLVVCETFKFRC-LKYWLKGESKEQTEIFVENLP-GGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 228 d~~~l~v~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~G~lwv~~~~g 284 (289)
+|+ ||++.. +++ .+|+..+..+..... .+.++ ....++..|++|+||+++..|
T Consensus 549 ~g~-lWi~T~--~Glv~~~d~~~~~~~~~~~-~~gl~~~~i~~i~~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 549 KGQ-MWLATG--EGLVCFPSARNFDYQVFQR-KEGLPNTHIRAISEDKNGNIWASTNTG 603 (781)
T ss_dssp TSC-EEEEET--TEEEEESCTTTCCCEEECG-GGTCSCCCCCEEEECSSSCEEEECSSC
T ss_pred CCC-EEEEEC--CCceEEECCCCCcEEEccc-cCCCCCceEEEEEECCCCCEEEEcCCc
Confidence 777 899854 677 999876544322111 11222 234568899999999999654
No 77
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.45 E-value=6.5e-12 Score=109.90 Aligned_cols=189 Identities=16% Similarity=0.144 Sum_probs=121.7
Q ss_pred cCCcceEEEccC----CCEEEEecC------CeEEEEecCC-c---eEEeee-e------cCcCccCeEEcCCCcEEEEe
Q 022967 76 LNGPEDVCVDRN----GVLYTATRD------GWIKRLHKNG-T---WENWKL-I------GGDTLLGITTTQENEILVCD 134 (289)
Q Consensus 76 ~~~p~~l~~d~~----g~l~v~~~~------g~i~~~~~~g-~---~~~~~~-~------~~~p~~gl~~d~~g~l~v~~ 134 (289)
..+|.+|+++++ +.||++... ++|.+++.++ . .+.+.. . ...+. +|++++||.||+++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~-~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGG-RIAFGPDGMLYVTT 152 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCC-CEEECTTSCEEEEC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCc-eEEECCCCCEEEEE
Confidence 568999999997 889987642 7899998543 2 222211 1 12467 99999999999996
Q ss_pred CC--------------CceEEEeCCC-e--------------EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCc
Q 022967 135 AD--------------KGLLKVTEEG-V--------------TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGL 184 (289)
Q Consensus 135 ~~--------------~~i~~~~~~g-~--------------~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~ 184 (289)
.. ..|+|++.+| + +++. ..++.|.+|++++ +|+||+++..... .
T Consensus 153 G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-----~G~rnp~g~a~d~~~g~l~v~d~g~~~-~ 226 (352)
T 2ism_A 153 GEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-----LGHRNPQGLAWHPKTGELFSSEHGPSG-E 226 (352)
T ss_dssp CCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-----ECCSEECCCEECTTTCCEEEEEECC----
T ss_pred CCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-----EcCCCcccEEEECCCCCEEEEEcCCCC-C
Confidence 31 2588888555 2 1111 1245799999999 7999999864210 0
Q ss_pred cccccccceecCCCEEEEEeCCCCe-----------------EEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEe
Q 022967 185 HNWGLDLLEAKPHGKLLKYDPSLNE-----------------TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWL 247 (289)
Q Consensus 185 ~~~~~~~~~~~~~g~i~~~~~~~~~-----------------~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~ 247 (289)
. . .....|.++.+. +. ..........|.|+++. +| .+|+++...++|+++++
T Consensus 227 ~----~----~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~ 295 (352)
T 2ism_A 227 Q----G----YGHDEVNLIVPG-GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF-RG-DLYVAGLRGQALLRLVL 295 (352)
T ss_dssp -----------CCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE-TT-EEEEEETTTTEEEEEEE
T ss_pred C----C----CCCeEEEEeccC-CcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE-CC-EEEEEECCCCEEEEEEE
Confidence 0 0 001234444332 10 00011223468899994 45 49999999999999998
Q ss_pred cCCC----CcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 248 KGES----KEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 248 ~~~~----~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
++.. ....+.+... .+.|.+++++.||.|||++..
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 296 EGERGRWRVLRVETALSG-FGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp EEETTEEEEEEEEEEEES-SCCEEEEEECTTSCEEEEECS
T ss_pred CCCCcceeecchheeccc-CCCeeEEEECCCCcEEEEEeC
Confidence 7543 1223444432 367999999999999999974
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.44 E-value=7.7e-11 Score=101.07 Aligned_cols=182 Identities=9% Similarity=0.045 Sum_probs=121.7
Q ss_pred cCCcceEEEccCCC-EEEEe-cCCeEEEEe-cCCce-EEeeeecCcCccC-eEEcCCCcEEEEeCCC----ceEEEe-CC
Q 022967 76 LNGPEDVCVDRNGV-LYTAT-RDGWIKRLH-KNGTW-ENWKLIGGDTLLG-ITTTQENEILVCDADK----GLLKVT-EE 145 (289)
Q Consensus 76 ~~~p~~l~~d~~g~-l~v~~-~~g~i~~~~-~~g~~-~~~~~~~~~p~~g-l~~d~~g~l~v~~~~~----~i~~~~-~~ 145 (289)
...| +++++++|+ +|++. .++.|++++ .+++. .........+. . ++++++|+.+++.... .|..++ .+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 4556 999999887 78766 478999999 45664 44444556677 6 9999999744454333 688888 55
Q ss_pred C-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCC-CEEEEEeCCCCeE----EEeeCCCC
Q 022967 146 G-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPH-GKLLKYDPSLNET----SILLDSLF 218 (289)
Q Consensus 146 g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~-g~i~~~~~~~~~~----~~~~~~~~ 218 (289)
+ ....... ...+.+++++|||+ +|+++... .. -.+|.++.+ +.. ........
T Consensus 118 ~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~---------------~~~i~~~~~~~~-g~~~~~~~~~~~~~~ 176 (331)
T 3u4y_A 118 NKFISTIPI-----PYDAVGIAISPNGNGLILIDRSS---------------ANTVRRFKIDAD-GVLFDTGQEFISGGT 176 (331)
T ss_dssp TEEEEEEEC-----CTTEEEEEECTTSSCEEEEEETT---------------TTEEEEEEECTT-CCEEEEEEEEECSSS
T ss_pred CCeEEEEEC-----CCCccceEECCCCCEEEEEecCC---------------CceEEEEEECCC-CcEeecCCccccCCC
Confidence 6 3222221 13468999999995 88886431 11 235555543 222 12223445
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcc-eeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ-TEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
.|.+++++||++++|++....+.|.+||+.+.+... ...+ .....|.+++++++|+ +|++..
T Consensus 177 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 177 RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV--GTNNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE--ECSSCCCCEEECTTSSEEEEECS
T ss_pred CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec--cCCCCCceEEECCCCCEEEEEEc
Confidence 689999999999999999888999999987544311 2222 2235788999999997 777764
No 79
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.43 E-value=2.8e-12 Score=121.84 Aligned_cols=149 Identities=13% Similarity=0.141 Sum_probs=111.8
Q ss_pred cCCcceEEEcc-CCCEEEEe-cCCeEEEEecCCceE-Eeee-ecCcCccCeEEcC-CCcEEEEeCC--CceEEEeCCC--
Q 022967 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTWE-NWKL-IGGDTLLGITTTQ-ENEILVCDAD--KGLLKVTEEG-- 146 (289)
Q Consensus 76 ~~~p~~l~~d~-~g~l~v~~-~~g~i~~~~~~g~~~-~~~~-~~~~p~~gl~~d~-~g~l~v~~~~--~~i~~~~~~g-- 146 (289)
+..|++|++|. +|+||+++ ..++|.+++.+|... .+.. ....|. +|++|+ .|.||+++.+ ..|++++.+|
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~-giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCC-CEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcc-eEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 56799999995 78999876 568899999777543 3332 346799 999997 5789999864 4688888666
Q ss_pred eEEEEeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC---CCCCcce
Q 022967 147 VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---SLFFANG 222 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~---~~~~p~g 222 (289)
.+.+.. ..+..|++|+++++ ++|||++.. .++|.+++.++...+.+.. .+..|.|
T Consensus 531 ~~~l~~----~~l~~PnGlavd~~~~~LY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 531 IYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp CCEESC----SSCSSCCCEEECTTTCCEEEEETT-----------------TTEEEEECSSSSCCEEECCCSSSCSSCCC
T ss_pred eeEEEe----CCCCCccEEEEeccCCEEEEEecC-----------------CCeEEEEccCCCceEEEEecCCcCCCceE
Confidence 444432 23568999999985 689999964 4689999998655555543 3678999
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEec
Q 022967 223 VALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 223 l~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
|+++. +.|||++..+++|.+++..
T Consensus 590 lavd~--~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 590 LAVFE--DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp CEEET--TEEEEECSTTTCEEEEETT
T ss_pred eEEEC--CEEEEEeCCCCeEEEEEcc
Confidence 99864 4799999999999999864
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.43 E-value=2.4e-11 Score=104.21 Aligned_cols=188 Identities=11% Similarity=0.124 Sum_probs=124.9
Q ss_pred CCcce-EEEccCCC-EEEEecC-C--eEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC-Cc-eEEEe--CC
Q 022967 77 NGPED-VCVDRNGV-LYTATRD-G--WIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KG-LLKVT--EE 145 (289)
Q Consensus 77 ~~p~~-l~~d~~g~-l~v~~~~-g--~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-~~-i~~~~--~~ 145 (289)
..|.. ++++++|+ ||++..+ + .|..++ .+++..........|. +++++++|+ +|+++.. .. +..++ .+
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAV-GIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEE-EEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCcc-ceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 56888 99999888 4543343 2 899999 4555544444456678 999999996 8888654 55 66555 44
Q ss_pred C-eEEEE-eccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE---EEeeCCCCC
Q 022967 146 G-VTVLA-SHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET---SILLDSLFF 219 (289)
Q Consensus 146 g-~~~~~-~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~---~~~~~~~~~ 219 (289)
| +.... .... ....+.+++++|||+ +|++... .+.|..+|.++++. .........
T Consensus 162 g~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~ 222 (331)
T 3u4y_A 162 GVLFDTGQEFIS--GGTRPFNITFTPDGNFAFVANLI-----------------GNSIGILETQNPENITLLNAVGTNNL 222 (331)
T ss_dssp CCEEEEEEEEEC--SSSSEEEEEECTTSSEEEEEETT-----------------TTEEEEEECSSTTSCEEEEEEECSSC
T ss_pred CcEeecCCcccc--CCCCccceEECCCCCEEEEEeCC-----------------CCeEEEEECCCCcccceeeeccCCCC
Confidence 5 32221 1111 123578999999996 8888643 36788899876664 333344567
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccC---C---CCCCceeeCCCCC-EEEEEeCc
Q 022967 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL---P---GGPDNIKLAPDGS-FWIAILQV 284 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~---~~p~~i~~d~~G~-lwv~~~~g 284 (289)
|.+++++||++++|++....+.|.+||..+.+......+.... + ....+++++.+|. +|++...+
T Consensus 223 ~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 223 PGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp CCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred CceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 8999999999999999887888999998754432222222111 1 1124478999985 67877654
No 81
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.38 E-value=4.6e-11 Score=99.81 Aligned_cols=187 Identities=11% Similarity=0.013 Sum_probs=124.6
Q ss_pred ceeEeccCCcCCcceEEEccCCCEEEEec---CCeEEEEe-cCCceEEeeeecC--cCccCeEEcCCCcEEEEeCC-Cce
Q 022967 67 SVTRLGEGILNGPEDVCVDRNGVLYTATR---DGWIKRLH-KNGTWENWKLIGG--DTLLGITTTQENEILVCDAD-KGL 139 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g~l~v~~~---~g~i~~~~-~~g~~~~~~~~~~--~p~~gl~~d~~g~l~v~~~~-~~i 139 (289)
.+..++-+.-..|++++++++|.||+++. .+.|.++| .+|+......... .+. |++++ .++||+++.. +.+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fge-Gi~~~-g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGE-GLTLL-NEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEE-EEEEE-TTEEEEEETTCSEE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceE-EEEEe-CCEEEEEEecCCEE
Confidence 34556656445689999999899998863 57899999 6777654433233 344 67776 4589999865 568
Q ss_pred EEEe-CCC--eEEEEeccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe-e
Q 022967 140 LKVT-EEG--VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-L 214 (289)
Q Consensus 140 ~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~ 214 (289)
+.+| ++. +..+.. + .+.+..+.+|| ++|+++++ +.|+.+|+++.+.... .
T Consensus 89 ~viD~~t~~v~~~i~~---g----~~~g~glt~Dg~~l~vs~gs------------------~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTH---Q----MKDGWGLATDGKILYGSDGT------------------SILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEEETTTTEEEEEEEC---C----SSSCCEEEECSSSEEEECSS------------------SEEEEECTTTCCEEEEEE
T ss_pred EEEECCCCcEEEEEEC---C----CCCeEEEEECCCEEEEECCC------------------CeEEEEECCCCcEEEEEE
Confidence 8899 555 333321 1 13344555665 79999743 7899999987654332 1
Q ss_pred C-----CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeec----------cCCCCCCceeeCCCC-CEE
Q 022967 215 D-----SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE----------NLPGGPDNIKLAPDG-SFW 278 (289)
Q Consensus 215 ~-----~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~p~~i~~d~~G-~lw 278 (289)
- ....+|++.+. ++ .+|++....+.|.++|.++.+....-.+.. .....|.||+.|++| ++|
T Consensus 144 Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 144 VKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIF 221 (266)
T ss_dssp CEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred ECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEE
Confidence 1 23468899988 66 699999888999999987654322111100 011367899999887 688
Q ss_pred EEEe
Q 022967 279 IAIL 282 (289)
Q Consensus 279 v~~~ 282 (289)
|+.-
T Consensus 222 VTgk 225 (266)
T 2iwa_A 222 VTGK 225 (266)
T ss_dssp EEET
T ss_pred EECC
Confidence 8863
No 82
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.37 E-value=9.7e-11 Score=100.39 Aligned_cols=174 Identities=16% Similarity=0.155 Sum_probs=116.1
Q ss_pred EEEccCCCEEEEecCCeEEEEecCCceEEeeeecC-cCccCeEEcCCCcEEEEeCCCceEEEeCCC-eEEEEeccCCccc
Q 022967 82 VCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIGG-DTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHVNGSRI 159 (289)
Q Consensus 82 l~~d~~g~l~v~~~~g~i~~~~~~g~~~~~~~~~~-~p~~gl~~d~~g~l~v~~~~~~i~~~~~~g-~~~~~~~~~~~~~ 159 (289)
.+++ +|.||+++.++.|++++.+|+......... ... .+..+++|.||++....++++++.+| ...... .. .
T Consensus 103 ~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~-~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~-~~---~ 176 (330)
T 3hxj_A 103 FTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYA-TPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK-TN---D 176 (330)
T ss_dssp EEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCS-CCEECTTSCEEEECTTSEEEEECTTSCEEEEEE-CS---S
T ss_pred ceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceee-eeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe-cC---C
Confidence 3444 889999998899999996666433222222 234 78888899999998768899999447 432222 11 1
Q ss_pred cCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCC
Q 022967 160 NLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFK 239 (289)
Q Consensus 160 ~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~ 239 (289)
.....+.++++|+||++. ++|+++|+++...............+++++++. +|++.. .
T Consensus 177 ~~~~~~~~d~~g~l~v~t--------------------~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~ 234 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--------------------DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-D 234 (330)
T ss_dssp CCCSCCEECTTCCEEEES--------------------SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEET-T
T ss_pred CceeeeEEcCCCEEEEEe--------------------CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcC-C
Confidence 245678899999999984 358899954333323333334456778888776 899854 4
Q ss_pred CeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCcccc
Q 022967 240 FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFIS 287 (289)
Q Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i~ 287 (289)
+.|++++.++... ..+. .....+..+.+|.+|++|+++..+++.
T Consensus 235 ~gl~~~~~~g~~~---~~~~-~~~~~~~~~~~~~~g~l~v~t~~ggl~ 278 (330)
T 3hxj_A 235 GHLYAINPDGTEK---WRFK-TGKRIESSPVIGNTDTIYFGSYDGHLY 278 (330)
T ss_dssp TEEEEECTTSCEE---EEEE-CSSCCCSCCEECTTSCEEEECTTCEEE
T ss_pred CeEEEECCCCCEe---EEee-CCCCccccceEcCCCeEEEecCCCCEE
Confidence 7899997544322 1121 122345678889999999999887764
No 83
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.34 E-value=2.1e-10 Score=96.79 Aligned_cols=186 Identities=10% Similarity=0.013 Sum_probs=127.2
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEecCCceEEeeeec--CcCccCeEEcCCCcEEEEeCC--CceEEEeCCC--eEEE
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIG--GDTLLGITTTQENEILVCDAD--KGLLKVTEEG--VTVL 150 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~~~g~~~~~~~~~--~~p~~gl~~d~~g~l~v~~~~--~~i~~~~~~g--~~~~ 150 (289)
..+.+++++++|++++ +.+++|+.++++|+...-.... .... +..+.++|++++++.. .+++.++.+| +..+
T Consensus 37 ~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~ 114 (276)
T 3no2_A 37 WECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLSKT 114 (276)
T ss_dssp CCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE
T ss_pred CCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE
Confidence 4688999999999999 5567899999888754332222 2334 6777889999998754 4588888777 3333
Q ss_pred EeccC-CccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCC
Q 022967 151 ASHVN-GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (289)
Q Consensus 151 ~~~~~-~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~ 229 (289)
..... ...+..+..+.+.++|++++++.. .++|+.+|++ |+..-.......|.++...+++
T Consensus 115 ~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g 176 (276)
T 3no2_A 115 EFETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG 176 (276)
T ss_dssp EECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTT-SCEEEEEECSSCCCEEEECTTS
T ss_pred eccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCC-CCEEEEEECCCCccceeEcCCC
Confidence 22111 123345678899999999998753 4789999998 5543322333567888888888
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeeeec-cCC----CCCCceeeCCCCCEEEEEeCcc
Q 022967 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVE-NLP----GGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~----~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
+ +++++...++|+.+|.++.+... .+.. .++ ..|.++.++.+|+++|+.+.|.
T Consensus 177 ~-~~v~~~~~~~v~~~d~~tG~~~w--~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~ 234 (276)
T 3no2_A 177 D-CLVACGDAHCFVQLNLESNRIVR--RVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 234 (276)
T ss_dssp C-EEEECBTTSEEEEECTTTCCEEE--EEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTT
T ss_pred C-EEEEeCCCCeEEEEeCcCCcEEE--EecCCCCCCccccccccceEcCCCCEEEEeccCc
Confidence 8 77777777899999987322211 1111 111 3478899999999999997553
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.33 E-value=7.8e-10 Score=94.73 Aligned_cols=185 Identities=10% Similarity=0.098 Sum_probs=118.6
Q ss_pred CcceEEEccCCC-EEEEe-cCCeEEEEec-CCceE---EeeeecCcCccCeEEcCCCc-EEEEe-CCCceEEEe-CC-C-
Q 022967 78 GPEDVCVDRNGV-LYTAT-RDGWIKRLHK-NGTWE---NWKLIGGDTLLGITTTQENE-ILVCD-ADKGLLKVT-EE-G- 146 (289)
Q Consensus 78 ~p~~l~~d~~g~-l~v~~-~~g~i~~~~~-~g~~~---~~~~~~~~p~~gl~~d~~g~-l~v~~-~~~~i~~~~-~~-g- 146 (289)
.|.+++++++|+ ||++. .++.|..++. +|... ........+. +++++++|+ +|+++ ....+..++ .+ +
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCH-SANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBC-CCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCce-EEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 799999999887 67766 4778888874 44322 1122334577 999999985 88877 345677777 44 6
Q ss_pred eEEEEe-ccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCC--CCeEEE---ee---CC
Q 022967 147 VTVLAS-HVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS--LNETSI---LL---DS 216 (289)
Q Consensus 147 ~~~~~~-~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~~~~~~---~~---~~ 216 (289)
+..+.. .........+.+++++|+|. +|++... .+.|..++.+ +++... +. .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----------------~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----------------NSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 543220 01111123577899999996 7777632 3567777663 344321 11 11
Q ss_pred ---CCCcceEEEecCCCEEEEEeCCCCeEEEEEecC--CCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 217 ---LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG--ESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 217 ---~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
...+.+++|+||+++||++....+.|.+|+++. .+......+ ...+.|.+++++++|+ +|++..
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ--PTETQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE--ECSSSCCCEEECTTSSEEEEECT
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee--cCCCccceEEECCCCCEEEEecC
Confidence 234567999999999999988889999999873 222222222 1223488999999997 666663
No 85
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.33 E-value=3.2e-10 Score=94.67 Aligned_cols=155 Identities=12% Similarity=0.048 Sum_probs=108.7
Q ss_pred CCcCCcceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--e
Q 022967 74 GILNGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCDADKGLLKVT-EEG--V 147 (289)
Q Consensus 74 ~~~~~p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~ 147 (289)
+.-..+++++++ +++||+.+ .++.+.++| .+++...-.... +... |+..| .+++|+++..+.+..+| .+. .
T Consensus 63 ~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~-glt~D-g~~l~vs~gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 63 DDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGW-GLATD-GKILYGSDGTSILYEIDPHTFKLI 139 (266)
T ss_dssp CTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCC-EEEEC-SSSEEEECSSSEEEEECTTTCCEE
T ss_pred CCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeE-EEEEC-CCEEEEECCCCeEEEEECCCCcEE
Confidence 334567788887 56999777 678999999 455443322223 3344 55554 34799998656799999 444 3
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC--C---------
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--S--------- 216 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--~--------- 216 (289)
..+.-...+.+...++.+.+. +|.+|++... .+.|.++|++++++....+ +
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~-----------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ-----------------TDCIARISAKDGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTT
T ss_pred EEEEECCCCcccccceeEEEE-CCEEEEecCC-----------------CCeEEEEECCCCcEEEEEECCCccccccccc
Confidence 333222234455578898888 8899998743 3689999999887654322 1
Q ss_pred ---CCCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 217 ---LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 217 ---~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
...|+||+++++++++||+.....+|+.+++..
T Consensus 202 ~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred ccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 146799999999999999999999999999864
No 86
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.32 E-value=5.8e-10 Score=92.26 Aligned_cols=150 Identities=19% Similarity=0.217 Sum_probs=107.7
Q ss_pred CcceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEEe
Q 022967 78 GPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLAS 152 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~~ 152 (289)
..++++++ +++||+.+ .++.++++| .+.+...-....+... |++.| .+.||+++....|..+| .+. ...+.-
T Consensus 88 FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 88 FGEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp CEEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred ceeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 34778887 56999777 678999999 4565443333345667 88876 35799998656799999 444 333322
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-------------CCC
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-------------LFF 219 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-------------~~~ 219 (289)
...+.++..++.+... +|.||+..-. ...|.++|++++++....+- ...
T Consensus 165 ~~~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~v 226 (262)
T 3nol_A 165 TAHGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDV 226 (262)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCC
T ss_pred ccCCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCc
Confidence 2344566677778776 8999998743 36899999999987654321 246
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEec
Q 022967 220 ANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
+||||++|+++.|||+.-.--+++.+.+.
T Consensus 227 lNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 227 LNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred eEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 79999999999999998877788877653
No 87
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.32 E-value=5.9e-10 Score=97.51 Aligned_cols=188 Identities=13% Similarity=0.072 Sum_probs=117.7
Q ss_pred cCCcceEEEccCCC-EEEEecCCeEEEEe-c-CCceEEeee--ecCcCccCeEEcCCCc-EEE--Ee-------------
Q 022967 76 LNGPEDVCVDRNGV-LYTATRDGWIKRLH-K-NGTWENWKL--IGGDTLLGITTTQENE-ILV--CD------------- 134 (289)
Q Consensus 76 ~~~p~~l~~d~~g~-l~v~~~~g~i~~~~-~-~g~~~~~~~--~~~~p~~gl~~d~~g~-l~v--~~------------- 134 (289)
...|..++++++|+ ||+++.+ .|..++ . +|+...... ..+.|. .++++++|+ +|+ ++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeec
Confidence 45799999999987 7777665 788887 3 776544322 124577 899999998 243 32
Q ss_pred CCCceEEEe--CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCC-CCe
Q 022967 135 ADKGLLKVT--EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LNE 209 (289)
Q Consensus 135 ~~~~i~~~~--~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~ 209 (289)
....+..++ .+| ...............+.+++++|||+ +|+++.. .+.|+.++.+ +++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCC
Confidence 223344444 456 43221111101124678999999996 7777642 3567777766 566
Q ss_pred EEEe---e--CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC--CCCcc-eeeeeccCC------C-------CCCc
Q 022967 210 TSIL---L--DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG--ESKEQ-TEIFVENLP------G-------GPDN 268 (289)
Q Consensus 210 ~~~~---~--~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~--~~~~~-~~~~~~~~~------~-------~p~~ 268 (289)
...+ . .....|.+++|+|||+++|+++...+.|.+|+.+. .++.. .... ..++ . .|.+
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSF-PLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-ESSCTTCCCBCTTTSSBSEEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceE-EcCCCCcCCccccccccccccc
Confidence 5432 1 12456899999999999999988778898888753 12211 0111 1111 1 3678
Q ss_pred ee-eCCCCC-EEEEEeC
Q 022967 269 IK-LAPDGS-FWIAILQ 283 (289)
Q Consensus 269 i~-~d~~G~-lwv~~~~ 283 (289)
++ +++||+ +|++..+
T Consensus 259 i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 259 VCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEECTTSSEEEEEEEE
T ss_pred EEEECCCCCEEEEECCC
Confidence 99 999995 6777643
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.29 E-value=7.5e-10 Score=96.33 Aligned_cols=186 Identities=15% Similarity=0.157 Sum_probs=115.6
Q ss_pred CCcceEEEccCCCEEEEe-cCCeEEEEe--cCCceEEee----eec----------CcCccCeEEcCCCc-EEEEeCC-C
Q 022967 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLH--KNGTWENWK----LIG----------GDTLLGITTTQENE-ILVCDAD-K 137 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~-~~g~i~~~~--~~g~~~~~~----~~~----------~~p~~gl~~d~~g~-l~v~~~~-~ 137 (289)
..|..+++ .+..||++. .++.|..++ .+|...... ... ..++ +++++++|+ ||+++.+ .
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH-CVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE-EEEECTTSSEEEEEETTTT
T ss_pred CCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce-EEEECCCCCEEEEEeCCCC
Confidence 56888888 344577776 567888887 344332211 111 1235 799999997 8888764 3
Q ss_pred ceEEEe---CCC------eEEE--EeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeC
Q 022967 138 GLLKVT---EEG------VTVL--ASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP 205 (289)
Q Consensus 138 ~i~~~~---~~g------~~~~--~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~ 205 (289)
.+..++ ..+ +... ...........+.+++++|||+ +|++... .+.|..++.
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~ 240 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----------------GGTVIAFRY 240 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TCEEEEEEE
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----------------CCeEEEEEe
Confidence 455554 222 1111 0000111224578999999996 8887642 356777766
Q ss_pred CCCeEEEee------CCCCCcceEEEecCCCEEEEEeCC-CCeEEEEEecC--CCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 206 SLNETSILL------DSLFFANGVALSKDEDYLVVCETF-KFRCLKYWLKG--ESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 206 ~~~~~~~~~------~~~~~p~gl~~~~d~~~l~v~~~~-~~~i~~~~~~~--~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
++++.+.+. .+...|.+++|+|||++||+++.. .+.|.+|+++. ..+.....+. . ...|.+++++++|+
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~ 318 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGK 318 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSC
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCC
Confidence 566654331 223557799999999999999988 88999999862 2222222222 2 35789999999996
Q ss_pred -EEEEEeC
Q 022967 277 -FWIAILQ 283 (289)
Q Consensus 277 -lwv~~~~ 283 (289)
||++...
T Consensus 319 ~l~~~~~~ 326 (361)
T 3scy_A 319 YLLVACRD 326 (361)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 7777643
No 89
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.27 E-value=3.3e-10 Score=108.76 Aligned_cols=180 Identities=18% Similarity=0.231 Sum_probs=115.6
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCceEEeeeec-------CcCccCeEEcCCCcEEEEeCCCceEEEe-CC----
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLIG-------GDTLLGITTTQENEILVCDADKGLLKVT-EE---- 145 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~~-------~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~---- 145 (289)
..++..|++|+||+++ +++|.++++ ++++..+.... .... .|..|++|+||++....|+++++ ..
T Consensus 375 v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 375 IRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred eEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 4678899999999998 467999994 56666553211 1234 67888999999998778999998 32
Q ss_pred --C-eE---EEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-C-
Q 022967 146 --G-VT---VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-L- 217 (289)
Q Consensus 146 --g-~~---~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~- 217 (289)
+ +. .+ ....+........|..|++|+||+..+. .++|+++|+++++++.+... +
T Consensus 453 ~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWi~~~t-----------------~~Gl~~~d~~~~~~~~~~~~~~~ 514 (758)
T 3ott_A 453 TSGQYIAEQNY-SVHNGLSGMFINQIIPDNEGNVWVLLYN-----------------NKGIDKINPRTREVTKLFADELT 514 (758)
T ss_dssp CSSEEECSEEE-CGGGTCSCSCEEEEEECTTSCEEEEETT-----------------CSSEEEEETTTTEEEEECTTTSC
T ss_pred CCcceeccccc-ccccccccceeeeEEEcCCCCEEEEccC-----------------CCCcEEEeCCCCceEEecCCCcC
Confidence 1 11 11 1112222234678999999999992211 14699999998887766322 1
Q ss_pred --CCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCC-CCCCceeeCCCCCEEEEEeCc
Q 022967 218 --FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLP-GGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 218 --~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~G~lwv~~~~g 284 (289)
..++.+..+.+|. ||++.. ++|.+|+..+....... ...++ ....++..| +|+||+++..|
T Consensus 515 ~~~~~~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~~~~~--~~gl~~~~i~~i~~~-~g~lWi~t~~G 578 (758)
T 3ott_A 515 GEKSPNYLLCDEDGL-LWVGFH--GGVMRINPKDESQQSIS--FGSFSNNEILSMTCV-KNSIWVSTTNG 578 (758)
T ss_dssp GGGCEEEEEECTTSC-EEEEET--TEEEEECC--CCCCBCC--CCC---CCEEEEEEE-TTEEEEEESSC
T ss_pred CCcccceEEECCCCC-EEEEec--CceEEEecCCCceEEec--ccCCCccceEEEEEC-CCCEEEECCCC
Confidence 2356677777777 999853 68999987654433221 11222 223446665 78999998554
No 90
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=2.7e-10 Score=99.69 Aligned_cols=190 Identities=15% Similarity=0.114 Sum_probs=116.0
Q ss_pred CcceEEEccCCC---EEEEe-------------cCCeEEEEe--cCCceEEeee-----ecCcCccCeEEcCCCc-EEEE
Q 022967 78 GPEDVCVDRNGV---LYTAT-------------RDGWIKRLH--KNGTWENWKL-----IGGDTLLGITTTQENE-ILVC 133 (289)
Q Consensus 78 ~p~~l~~d~~g~---l~v~~-------------~~g~i~~~~--~~g~~~~~~~-----~~~~p~~gl~~d~~g~-l~v~ 133 (289)
.|.+++++++|+ +|+++ .+|.+..++ .+|+...... ....++ ++++++||+ ||++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~spdG~~l~~~ 162 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIH-GMVFDPTETYLYSA 162 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEE-EEEECTTSSEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcce-EEEECCCCCEEEEE
Confidence 388899999998 23443 467777776 4576543222 235678 999999996 7778
Q ss_pred eCC-CceEEEe-C-CC-eEEEEeccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCC
Q 022967 134 DAD-KGLLKVT-E-EG-VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (289)
Q Consensus 134 ~~~-~~i~~~~-~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 208 (289)
+.+ ..|+.++ . +| .+.+...........|.+++++||| .+|++.... ..-.++.++.+++
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~---------------~~v~v~~~~~~~g 227 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG---------------NRICEYVIDPATH 227 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT---------------TEEEEEEECTTTC
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC---------------CeEEEEEEeCCCC
Confidence 754 5677787 5 67 5433221100012468899999999 478875420 1123555666556
Q ss_pred eEEE----ee---CCC---C-------CcceEE-EecCCCEEEEEeCCCC-----eEEEEEecC-CCCcceeeeeccCCC
Q 022967 209 ETSI----LL---DSL---F-------FANGVA-LSKDEDYLVVCETFKF-----RCLKYWLKG-ESKEQTEIFVENLPG 264 (289)
Q Consensus 209 ~~~~----~~---~~~---~-------~p~gl~-~~~d~~~l~v~~~~~~-----~i~~~~~~~-~~~~~~~~~~~~~~~ 264 (289)
+... +. .+. . .+.+++ ++|||++||+++.+.+ .|.+|+++. .++............
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~ 307 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTS 307 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSC
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCC
Confidence 5421 21 111 1 478899 9999999999987655 899999862 222111112222234
Q ss_pred CCCceeeCC---CC-CEEEEEeC
Q 022967 265 GPDNIKLAP---DG-SFWIAILQ 283 (289)
Q Consensus 265 ~p~~i~~d~---~G-~lwv~~~~ 283 (289)
.|.++++++ +| .+|++...
T Consensus 308 ~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 308 GGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp CTTCCCEEECTTCTTEEEEECSS
T ss_pred CcccceecCCCcCCCEEEEEEcC
Confidence 578888887 66 46666543
No 91
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.27 E-value=1.2e-09 Score=90.46 Aligned_cols=149 Identities=19% Similarity=0.251 Sum_probs=107.2
Q ss_pred CcceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEEe
Q 022967 78 GPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLAS 152 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~~ 152 (289)
..|+++++ +++||+.+ .++.++++| .+++...-....+... |++.| .+.||+++....|..+| .+. ...+.-
T Consensus 97 FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 97 FAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 45778887 56999776 678999999 4565443333445667 88886 35799998657799999 554 333332
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC--------------CCC
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--------------SLF 218 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--------------~~~ 218 (289)
...+.++..++.|... +|.||+.... ...|.++|++++++....+ ...
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred CCCCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 3345556677888876 8899988743 3689999999998764422 124
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEe
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWL 247 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~ 247 (289)
.+||||++|+++.|||+.-.--+++.+.+
T Consensus 236 vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp CEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 68999999999999999877677777654
No 92
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.25 E-value=2.4e-09 Score=91.39 Aligned_cols=194 Identities=14% Similarity=0.098 Sum_probs=119.3
Q ss_pred CcceEEEccCCC-EEEEe-cCCeEEEEe-cCCceEEeeeecC------cCccCeEEcCCC-cEEEEe------------C
Q 022967 78 GPEDVCVDRNGV-LYTAT-RDGWIKRLH-KNGTWENWKLIGG------DTLLGITTTQEN-EILVCD------------A 135 (289)
Q Consensus 78 ~p~~l~~d~~g~-l~v~~-~~g~i~~~~-~~g~~~~~~~~~~------~p~~gl~~d~~g-~l~v~~------------~ 135 (289)
.|.+++++++|+ +|++. .++.|+.++ .+++......... .+. +++++++| .||++. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 489999999885 67665 568899999 4566543222222 678 99999998 578875 2
Q ss_pred CCceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCc-cCcccc--c---------cc---------c
Q 022967 136 DKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTK-FGLHNW--G---------LD---------L 191 (289)
Q Consensus 136 ~~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~-~~~~~~--~---------~~---------~ 191 (289)
...|+.++ .++ ....... + ..+.+++++|||+ ||+++.... +-.... . .. +
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 188 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred CceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence 36688888 555 3222221 1 2467889999986 777632200 000000 0 00 0
Q ss_pred c-eecCCC-----------------------EEEEEeCCCCeEEEe--eCCCCCcceEEEecCCCEEEEEeCCCCeEEEE
Q 022967 192 L-EAKPHG-----------------------KLLKYDPSLNETSIL--LDSLFFANGVALSKDEDYLVVCETFKFRCLKY 245 (289)
Q Consensus 192 ~-~~~~~g-----------------------~i~~~~~~~~~~~~~--~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~ 245 (289)
. .....+ .|+.+|.++++.... ......+.+++++||++++|++ .+.|++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~ 265 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESF 265 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEE
Confidence 0 000000 467888877765422 2233467889999999999999 3789999
Q ss_pred EecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEeCc
Q 022967 246 WLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQV 284 (289)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~~g 284 (289)
|+++.+.. ..+ .....|.+++++++|+ +|++...+
T Consensus 266 d~~~~~~~--~~~--~~~~~~~~~~~s~dg~~l~~~~~~~ 301 (337)
T 1pby_B 266 DLEKNASI--KRV--PLPHSYYSVNVSTDGSTVWLGGALG 301 (337)
T ss_dssp ETTTTEEE--EEE--ECSSCCCEEEECTTSCEEEEESBSS
T ss_pred ECCCCcCc--cee--cCCCceeeEEECCCCCEEEEEcCCC
Confidence 97653221 111 2235688999999986 77775443
No 93
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.25 E-value=1.7e-09 Score=94.81 Aligned_cols=178 Identities=13% Similarity=0.175 Sum_probs=126.5
Q ss_pred CCcceEEEccCCC-EEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC-CceEEEe-CCC-eEE
Q 022967 77 NGPEDVCVDRNGV-LYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-EEG-VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~-l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~-~~g-~~~ 149 (289)
..+.++++.++|+ ||++. .++.|..++ .+++..........+. +++++++|+ ||++... ..|..++ .++ ...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 4588999999887 55554 789999999 5666554444445667 999999886 7777654 5688888 556 322
Q ss_pred EEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecC
Q 022967 150 LASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKD 228 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d 228 (289)
.... ...+.++++.++|. +|++... .+.|+.+|..+++..........+..++++++
T Consensus 111 ~~~~-----~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~d 168 (391)
T 1l0q_A 111 TVKT-----GKSPLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPD 168 (391)
T ss_dssp EEEC-----SSSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECCSSEEEEEECTT
T ss_pred EEeC-----CCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEEEEEecCCCcceEEECCC
Confidence 2221 12467899999996 7677542 46899999887776655555567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEE
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAI 281 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~ 281 (289)
++.+|++....+.|+.||+...... .. . .....+.+++++.+|. +|++.
T Consensus 169 g~~l~~~~~~~~~v~~~d~~~~~~~--~~-~-~~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 169 GTKVYVANFDSMSISVIDTVTNSVI--DT-V-KVEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEE--EE-E-ECSSEEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCeEE--EE-E-ecCCCccceEECCCCCEEEEEe
Confidence 9999999888899999998654221 11 1 1234567788888885 66665
No 94
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.24 E-value=3e-09 Score=87.25 Aligned_cols=151 Identities=15% Similarity=0.121 Sum_probs=107.6
Q ss_pred CCcceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEE
Q 022967 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~ 151 (289)
...++++++ +++||+.+ .++.++++| .+.+...-....+.+. |++.| .+.||+++....|..+| .+. ...+.
T Consensus 65 ~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 65 YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp CCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred cceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 345788887 57999766 678999999 4555443333345667 78765 35899999767799999 444 33333
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC--------------CC
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--------------SL 217 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--------------~~ 217 (289)
-...+.++..++.|... +|+||+..-. ...|.++|++++++....+ ..
T Consensus 142 V~~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~ 203 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTN 203 (243)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTS
T ss_pred EccCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcC
Confidence 33345556677777765 8899988642 3689999999998764422 12
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEEec
Q 022967 218 FFANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 218 ~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
..+||||++|++++|||+.-.--+++.+.+.
T Consensus 204 ~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 204 DVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp SCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 4679999999999999998777788877664
No 95
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.22 E-value=3e-10 Score=109.02 Aligned_cols=179 Identities=17% Similarity=0.149 Sum_probs=113.1
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCceEEeeeec-CcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEecc
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLIG-GDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLASHV 154 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~~~ 154 (289)
-.+++.|.+|.||+++.+ ++.+++. .+++....... .... .+. +.+|.|||+.. .|+++++ .++ ++.+....
T Consensus 65 i~~i~~d~~g~lWigT~~-Gl~~yd~~~~~f~~~~~~~~~~i~-~i~-~~~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~ 140 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTDN-GILVYNYRADRYEQPETDFPTDVR-TMA-LQGDTLWLGAL-NGLYTYQLQSRKLTSFDTRR 140 (758)
T ss_dssp EEEEEEETTTEEEEEETT-EEEEEETTTTEECCCSCCCCSCEE-EEE-EETTEEEEEET-TEEEEEETTTCCEEEECHHH
T ss_pred EEEEEEcCCCcEEEEeCC-CeEEEeCCCCEEECcccCCCceEE-EEE-ecCCcEEEEcC-CcceeEeCCCCeEEEeccCC
Confidence 356788999999999865 5999983 33333210000 1112 343 35789999986 5999999 555 66552211
Q ss_pred CCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC----C--CcceEEEecC
Q 022967 155 NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL----F--FANGVALSKD 228 (289)
Q Consensus 155 ~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~----~--~p~gl~~~~d 228 (289)
.+.+......|..+.+|+||++.. ++|++++++++++..+.... . ....+..+.+
T Consensus 141 ~~l~~~~i~~i~~d~~g~lWigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 201 (758)
T 3ott_A 141 NGLPNNTIYSIIRTKDNQIYVGTY-------------------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTT 201 (758)
T ss_dssp HCCSCSCEEEEEECTTCCEEEEET-------------------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETT
T ss_pred CCcCCCeEEEEEEcCCCCEEEEeC-------------------CCHhhCccCCCceEEecCCCccccccceeEEEEEECC
Confidence 222234567889999999999853 46999999877766543211 1 1234666767
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
++.||++.. ++|++|+.....+.....+. ......|..|.+|+||||+. +|+
T Consensus 202 ~~~lWigt~--~Gl~~~~~~~~~~~~~~~l~---~~~i~~i~~d~~g~lWigT~-~Gl 253 (758)
T 3ott_A 202 RQCVWIGTE--GYLFQYFPSTGQIKQTEAFH---NNSIKSLALDGNGDLLAGTD-NGL 253 (758)
T ss_dssp TTEEEEEEE--EEEEEEETTTTEEEEEEEEE---EEEEEEEEECTTCCEEEEET-TEE
T ss_pred CCEEEEEEC--CCCeEEcCCCCeEEeccCCC---CCeEEEEEEcCCCCEEEEeC-Cce
Confidence 777899852 58999987654332211111 12345688999999999995 454
No 96
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.22 E-value=2.2e-09 Score=91.90 Aligned_cols=175 Identities=12% Similarity=0.099 Sum_probs=113.2
Q ss_pred CCCEEEE-ecCCeEEEEec--CCceEEe--eeecCcCccCeEEcCCCc-EEEEeCC-CceEEEe-C--CC-eEEEEeccC
Q 022967 87 NGVLYTA-TRDGWIKRLHK--NGTWENW--KLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-E--EG-VTVLASHVN 155 (289)
Q Consensus 87 ~g~l~v~-~~~g~i~~~~~--~g~~~~~--~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~-~--~g-~~~~~~~~~ 155 (289)
+..+|++ ..++.|..++. +|+.... ......+. +++++++|+ ||++... ..+..++ . +| .+.+.....
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQ-PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCC-CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCc-eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 3467776 46788999884 3544333 23345677 999999997 8887765 4565555 3 55 544432211
Q ss_pred CccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCC---eEEEeeCCCCCcceEEEecCCCE
Q 022967 156 GSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN---ETSILLDSLFFANGVALSKDEDY 231 (289)
Q Consensus 156 ~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~~~~~p~gl~~~~d~~~ 231 (289)
. ..+.+++++|+|+ ||++... .+.|..+|.+.+ +..........+.+++++|+++.
T Consensus 83 ~---~~~~~~~~s~dg~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 83 P---GSLTHISTDHQGQFVFVGSYN-----------------AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRT 142 (343)
T ss_dssp S---SCCSEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSE
T ss_pred C---CCCcEEEEcCCCCEEEEEecC-----------------CCeEEEEECCCCccccccccccCCCCceEEEECCCCCE
Confidence 1 2678999999996 7777542 255666665222 22223345567899999999999
Q ss_pred EEEEeCCCCeEEEEEecC-CCCccee--eeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 232 LVVCETFKFRCLKYWLKG-ESKEQTE--IFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 232 l~v~~~~~~~i~~~~~~~-~~~~~~~--~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
+|+++...+.|.+|++.. .+..... .........|.+++++++|. +|++..
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 999987778999999875 3332211 22212234678899999996 677763
No 97
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.22 E-value=4.8e-09 Score=91.19 Aligned_cols=189 Identities=13% Similarity=0.220 Sum_probs=116.3
Q ss_pred cCCcceEEEccCCC-EEEEecC----CeEEEEe--cC-CceEEeee---ecCcCccCeEEcCCCcEEEEeCCC-ceEEEe
Q 022967 76 LNGPEDVCVDRNGV-LYTATRD----GWIKRLH--KN-GTWENWKL---IGGDTLLGITTTQENEILVCDADK-GLLKVT 143 (289)
Q Consensus 76 ~~~p~~l~~d~~g~-l~v~~~~----g~i~~~~--~~-g~~~~~~~---~~~~p~~gl~~d~~g~l~v~~~~~-~i~~~~ 143 (289)
...|..++++++|+ ||++..+ +.|..++ .+ |+.+.+.. ....|. .+++ ....||+++... .+..++
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~-dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT-NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE-CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE-CCCEEEEEECCCCEEEEEE
Confidence 57899999999887 7776653 6776555 43 66554432 234677 8888 333588887543 466666
Q ss_pred --CCC-eEEE----EeccCCc-----cccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEE--EEEeCCCC
Q 022967 144 --EEG-VTVL----ASHVNGS-----RINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKL--LKYDPSLN 208 (289)
Q Consensus 144 --~~g-~~~~----~~~~~~~-----~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i--~~~~~~~~ 208 (289)
.++ +..+ .....+. ....+.+++++|||+ +|+++.. .+.| |.++..++
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNAN 189 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTCC
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCCC
Confidence 344 3211 1111110 112357799999996 8888643 2344 44555443
Q ss_pred ----e-E-------EEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeec--cCCCCCCceeeCCC
Q 022967 209 ----E-T-------SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--NLPGGPDNIKLAPD 274 (289)
Q Consensus 209 ----~-~-------~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~ 274 (289)
+ + .........|.+++|+||++++|+++...+.|.+|++++..+........ .....|.++++++|
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD 269 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC
Confidence 2 2 12233456788999999999999999888999999987543322222211 11134668999999
Q ss_pred CC-EEEEEeC
Q 022967 275 GS-FWIAILQ 283 (289)
Q Consensus 275 G~-lwv~~~~ 283 (289)
|+ +|++...
T Consensus 270 g~~l~v~~~~ 279 (361)
T 3scy_A 270 GKYLYASNRL 279 (361)
T ss_dssp SSEEEEEECS
T ss_pred CCEEEEECCC
Confidence 97 5676654
No 98
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.20 E-value=2.7e-09 Score=91.70 Aligned_cols=196 Identities=14% Similarity=0.045 Sum_probs=109.6
Q ss_pred CcceEEEccCCC-EEEEe-cCCeEEEEec-CCceEEeeeec-------CcCccCeEEcCCCc-EEEEeCC----------
Q 022967 78 GPEDVCVDRNGV-LYTAT-RDGWIKRLHK-NGTWENWKLIG-------GDTLLGITTTQENE-ILVCDAD---------- 136 (289)
Q Consensus 78 ~p~~l~~d~~g~-l~v~~-~~g~i~~~~~-~g~~~~~~~~~-------~~p~~gl~~d~~g~-l~v~~~~---------- 136 (289)
.|..++++++|+ +|++. .++.|+.++. +++........ ..+. +++++++|+ ||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEccccccccccccc
Confidence 689999999886 77665 6789999994 55544322221 2367 999999985 6666632
Q ss_pred --CceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCc-cCccccc-cccceec---------------
Q 022967 137 --KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTK-FGLHNWG-LDLLEAK--------------- 195 (289)
Q Consensus 137 --~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~-~~~~~~~-~~~~~~~--------------- 195 (289)
..++.++ .++ .......... ...+.++++++||++|++...-. +-..... ...+...
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 200 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCC
T ss_pred CCCeEEEEECCCccccceeeeccC--CCcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceee
Confidence 5677888 554 2111010111 12467888999999887532200 0000000 0000000
Q ss_pred ------------------------------CCCEEEEEeCCCCeEEEee--CCCCCcceEEEec-CCCEEEEEeCCCCeE
Q 022967 196 ------------------------------PHGKLLKYDPSLNETSILL--DSLFFANGVALSK-DEDYLVVCETFKFRC 242 (289)
Q Consensus 196 ------------------------------~~g~i~~~~~~~~~~~~~~--~~~~~p~gl~~~~-d~~~l~v~~~~~~~i 242 (289)
....++.++..++++..+. .....+.+++++| |++.+|++ .+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v 277 (349)
T 1jmx_B 201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRL 277 (349)
T ss_dssp CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEE
T ss_pred ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeE
Confidence 0001112333333332221 1123567788899 99999998 5789
Q ss_pred EEEEecCCCCcceeeeeccCCCCCCceeeCCCC-CEEEEEeC
Q 022967 243 LKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAILQ 283 (289)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwv~~~~ 283 (289)
++||+.+.+.. ..+ .....|.+++++.+| .||++...
T Consensus 278 ~~~d~~~~~~~--~~~--~~~~~~~~~~~s~dg~~l~~~~~~ 315 (349)
T 1jmx_B 278 AKYDLKQRKLI--KAA--NLDHTYYCVAFDKKGDKLYLGGTF 315 (349)
T ss_dssp EEEETTTTEEE--EEE--ECSSCCCEEEECSSSSCEEEESBS
T ss_pred EEEECccCeEE--EEE--cCCCCccceEECCCCCEEEEecCC
Confidence 99997653221 112 123458889999887 57776443
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.20 E-value=6.3e-09 Score=91.12 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=123.8
Q ss_pred CcceEEEccCCC-EEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC-CceEEEe-CCC-eEEE
Q 022967 78 GPEDVCVDRNGV-LYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-EEG-VTVL 150 (289)
Q Consensus 78 ~p~~l~~d~~g~-l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~-~~g-~~~~ 150 (289)
.+.+++++++|+ ||++. .++.|..++ .+++..........+. +++++++|+ +|++... +.|+.++ .++ ....
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL-GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcc-eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 688899999887 66655 568999999 4555544444445667 999999986 6677654 5578888 566 3222
Q ss_pred EeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCC
Q 022967 151 ASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~ 229 (289)
... ...+.+++++++|. +|++... .+.|+.+|..+++..........+.++++++++
T Consensus 154 ~~~-----~~~~~~~~~~~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 211 (391)
T 1l0q_A 154 VSV-----GRSPKGIAVTPDGTKVYVANFD-----------------SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211 (391)
T ss_dssp EEC-----CSSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSEEEEEEECTTS
T ss_pred Eec-----CCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCeEEEEEecCCCccceEECCCC
Confidence 221 13467899999995 6677542 467999999877766555555678899999999
Q ss_pred CEEEEEeC--CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 230 DYLVVCET--FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 230 ~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
+.+|++.. ..+.|..||+..... ...+ .....|.+++++.+|. +|++..
T Consensus 212 ~~l~~~~~~~~~~~v~~~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 212 TKAYVTNVDKYFNTVSMIDTGTNKI--TARI--PVGPDPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp SEEEEEEECSSCCEEEEEETTTTEE--EEEE--ECCSSEEEEEECTTSSEEEEEET
T ss_pred CEEEEEecCcCCCcEEEEECCCCeE--EEEE--ecCCCccEEEEccCCCEEEEEcC
Confidence 99999875 578999999765321 1112 1123567788898885 667754
No 100
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.19 E-value=2e-09 Score=93.37 Aligned_cols=159 Identities=11% Similarity=0.124 Sum_probs=107.3
Q ss_pred eEEeeeecCcCccCeEEcCCCcEEEEeC-CCceEEEe-CCC-eEEEEe--ccCCccccCccceEEcCC----CcEEEeeC
Q 022967 108 WENWKLIGGDTLLGITTTQENEILVCDA-DKGLLKVT-EEG-VTVLAS--HVNGSRINLADDLIAATD----GSIYFSVA 178 (289)
Q Consensus 108 ~~~~~~~~~~p~~gl~~d~~g~l~v~~~-~~~i~~~~-~~g-~~~~~~--~~~~~~~~~~~~l~~~~d----G~lyv~~~ 178 (289)
++.+......|. +|++.++|+|||++. ..+|++++ .+| .+.+.. .........+.+|+++|| |.||++..
T Consensus 24 ~~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 345566677899 999999999999997 56799998 456 544432 122233457889999984 88999743
Q ss_pred CCccCccccccccceecCCCEEEEEeCCCC--------eEEEee-----CCCCCcceEEEecCCCEEEEEeC--------
Q 022967 179 STKFGLHNWGLDLLEAKPHGKLLKYDPSLN--------ETSILL-----DSLFFANGVALSKDEDYLVVCET-------- 237 (289)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--------~~~~~~-----~~~~~p~gl~~~~d~~~l~v~~~-------- 237 (289)
.. ..++|.|+..+.+ +.+.+. ....+...|+|++||. |||+..
T Consensus 103 ~~---------------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 103 SA---------------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLS 166 (347)
T ss_dssp CS---------------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGT
T ss_pred cC---------------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccc
Confidence 20 1357888876541 122222 1234567799999997 999842
Q ss_pred -----CCCeEEEEEecCCC-----CcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 238 -----FKFRCLKYWLKGES-----KEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 238 -----~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
...+|+|++.++.- +...+++...+ -.|.++++|.+|.||++.++.
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~ 222 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQ 222 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCS
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCC
Confidence 35789999987641 11234444333 358999999999999998753
No 101
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.18 E-value=4e-09 Score=87.24 Aligned_cols=183 Identities=13% Similarity=0.033 Sum_probs=116.1
Q ss_pred eEeccCCcCCcceEEEccCCCEEEEec-CC--eEEEEe-cCCceEEeeeecCcC--ccCeEEcCCCcEEEEeCC-CceEE
Q 022967 69 TRLGEGILNGPEDVCVDRNGVLYTATR-DG--WIKRLH-KNGTWENWKLIGGDT--LLGITTTQENEILVCDAD-KGLLK 141 (289)
Q Consensus 69 ~~~~~~~~~~p~~l~~d~~g~l~v~~~-~g--~i~~~~-~~g~~~~~~~~~~~p--~~gl~~d~~g~l~v~~~~-~~i~~ 141 (289)
+.++-+.-..-++|.++ ++.||+++. +| .|.++| .+|++..-......+ . |++++ .++||+++.. +.++.
T Consensus 35 ~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~Fge-Git~~-g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 35 HSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGE-GISDW-KDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEE-EEEEE-TTEEEEEESSSSEEEE
T ss_pred EEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcccee-EEEEe-CCEEEEEEeeCCEEEE
Confidence 44443422223788998 789998773 33 899999 678765544433444 4 67776 4589999865 56888
Q ss_pred Ee-CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe----e
Q 022967 142 VT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL----L 214 (289)
Q Consensus 142 ~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~----~ 214 (289)
+| ++. +..+.. .+ ...+++.+ .+.||+++++ +.|+.+|+++.+.... .
T Consensus 112 ~D~~t~~~~~ti~~--~~----eG~glt~d-g~~L~~SdGs------------------~~i~~iDp~T~~v~~~I~V~~ 166 (262)
T 3nol_A 112 WNIRNLRQVRSFNY--DG----EGWGLTHN-DQYLIMSDGT------------------PVLRFLDPESLTPVRTITVTA 166 (262)
T ss_dssp EETTTCCEEEEEEC--SS----CCCCEEEC-SSCEEECCSS------------------SEEEEECTTTCSEEEEEECEE
T ss_pred EECccCcEEEEEEC--CC----CceEEecC-CCEEEEECCC------------------CeEEEEcCCCCeEEEEEEecc
Confidence 99 555 444432 11 22355543 2479999853 6899999987654322 1
Q ss_pred C--CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeee---e------ccCCCCCCceeeCCCC-CEEEEE
Q 022967 215 D--SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIF---V------ENLPGGPDNIKLAPDG-SFWIAI 281 (289)
Q Consensus 215 ~--~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~---~------~~~~~~p~~i~~d~~G-~lwv~~ 281 (289)
. ....+|.+.+. +| .||+.....+.|.++|..+.+....-.+ . ......|+|||.|+++ ++||+.
T Consensus 167 ~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 167 HGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1 24556778876 55 5999988889999999875433211111 0 0112468899999875 788875
No 102
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.17 E-value=4e-10 Score=98.52 Aligned_cols=165 Identities=13% Similarity=0.138 Sum_probs=106.3
Q ss_pred ceEEeeeecCcCccCeEEcCCCc-EEEEeCCCceEEEeCCC-eE-EEEec--cCCccccCccceEEcC----CCcEEEee
Q 022967 107 TWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVTEEG-VT-VLASH--VNGSRINLADDLIAAT----DGSIYFSV 177 (289)
Q Consensus 107 ~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~~~g-~~-~~~~~--~~~~~~~~~~~l~~~~----dG~lyv~~ 177 (289)
+++.+......|. +|+++++|+ |||++...+|++++.+| .. .+... ........+.+|+++| +|.||++.
T Consensus 9 ~~~~va~~l~~P~-~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 9 NVEVLQDKLDHPW-ALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEEEESSEE-EEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEEEECCCCCcE-EEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 4556666678899 999999999 99999877788888666 43 22211 1111224568999999 58999986
Q ss_pred CCCccCccccccccceecCCCEEEEEeCCCC-----eEEEeeC-------CCCCcceEEEecCCCEEEEEeCC-------
Q 022967 178 ASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-----ETSILLD-------SLFFANGVALSKDEDYLVVCETF------- 238 (289)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-----~~~~~~~-------~~~~p~gl~~~~d~~~l~v~~~~------- 238 (289)
.... .......+|++++.+.+ ..+.+.. ...++.+|+|+||| .||++...
T Consensus 88 ~~~~----------~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 88 SEVG----------DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTA 156 (353)
T ss_dssp EEEC----------SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGG
T ss_pred eCCC----------CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCcc
Confidence 4200 00000246888765432 2222322 23457899999999 59999632
Q ss_pred ------CCeEEEEEecCCCC----------cceeeeeccCCCCCCceeeCC-CCCEEEEEeCc
Q 022967 239 ------KFRCLKYWLKGESK----------EQTEIFVENLPGGPDNIKLAP-DGSFWIAILQV 284 (289)
Q Consensus 239 ------~~~i~~~~~~~~~~----------~~~~~~~~~~~~~p~~i~~d~-~G~lwv~~~~g 284 (289)
..+|+|++.++.-. ...+.+...+ ..|.++++|. +|+||++..+.
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECS
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCC
Confidence 35899999886411 0223333222 3488999999 79999998763
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.15 E-value=5.4e-09 Score=86.52 Aligned_cols=173 Identities=11% Similarity=0.034 Sum_probs=113.2
Q ss_pred cceEEEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCc-cCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEEE
Q 022967 79 PEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTL-LGITTTQENEILVCDAD-KGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~-~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~~ 151 (289)
-.+|.++ ++.||+++ .+|+|.++| .+|++..-. ....+. .|++++ .++||+++.. +.++.+| ++. +..+.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 3688887 68999887 567899998 577654433 333333 068886 4589999865 5588899 555 44442
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe----eC--CCCCcceEEE
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL----LD--SLFFANGVAL 225 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~----~~--~~~~p~gl~~ 225 (289)
. .+ ...+++.+ .++||+++++ +.|+.+|+++.+.... .. ...+.|.+.+
T Consensus 134 ~--~~----eGwGLt~D-g~~L~vSdGs------------------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 134 Y--SG----EGWGLCYW-NGKLVRSDGG------------------TMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp C--SS----CCCCEEEE-TTEEEEECSS------------------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred C--CC----ceeEEecC-CCEEEEECCC------------------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 2 11 23466644 3479999853 6899999997664432 12 2446688887
Q ss_pred ecCCCEEEEEeCCCCeEEEEEecCCCCcceeeee----------ccCCCCCCceeeCCCC-CEEEEE
Q 022967 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV----------ENLPGGPDNIKLAPDG-SFWIAI 281 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~p~~i~~d~~G-~lwv~~ 281 (289)
. +| .||+.....+.|.++|....+....-.+. ......++|||.|+++ +|||+.
T Consensus 189 ~-dG-~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 189 A-NG-VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp E-TT-EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred e-CC-EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 6 56 59999888899999998755432211110 0122468899999865 899874
No 104
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.15 E-value=1.1e-09 Score=98.79 Aligned_cols=169 Identities=14% Similarity=0.107 Sum_probs=106.4
Q ss_pred ceEEeeeecCcCccCeEEcCCCcEEEEeCCC-ceEEEe-CCC-eEEEEeccCC----ccccCccceEEcC----CCcEEE
Q 022967 107 TWENWKLIGGDTLLGITTTQENEILVCDADK-GLLKVT-EEG-VTVLASHVNG----SRINLADDLIAAT----DGSIYF 175 (289)
Q Consensus 107 ~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~-~i~~~~-~~g-~~~~~~~~~~----~~~~~~~~l~~~~----dG~lyv 175 (289)
+++.+......|. +|+++++|+|||++... +|++++ .+| .+.+...... .....+.+|+++| +|.||+
T Consensus 18 ~~~~~a~~l~~P~-~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 18 DKKVILSNLNKPH-ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CEEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEEECCCCCce-EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 4455566667899 99999999999999765 599998 457 5554332111 1234567999999 789999
Q ss_pred eeCCCccCccccccccceecCCCEEEEEeCCCC--e---EEEee-----CCCCCcceEEEecCCCEEEEEeCC-------
Q 022967 176 SVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--E---TSILL-----DSLFFANGVALSKDEDYLVVCETF------- 238 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--~---~~~~~-----~~~~~p~gl~~~~d~~~l~v~~~~------- 238 (289)
+.......... . ......+|+|++.+.+ . .+.+. ....++++|+|++||+ |||+...
T Consensus 97 ~~s~~~~~~~~---~--~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 97 SGTFKNPKSTD---K--ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLA 170 (454)
T ss_dssp EEEEECTTC-----C--CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGG
T ss_pred EEeccccCCCc---c--ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcc
Confidence 86420000000 0 0000246888765321 2 22222 1245689999999997 9998431
Q ss_pred -------------------------CCeEEEEEecCCCCc--------ceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 239 -------------------------KFRCLKYWLKGESKE--------QTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 239 -------------------------~~~i~~~~~~~~~~~--------~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
..+|.|++.+|.-.. ..+.+...+ -.|.++++|.+|.||++.++
T Consensus 171 ~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~-RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH-RNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC-SEEEEEEECTTSCEEEEEEC
T ss_pred ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC-CCcceEEECCCCCEEEEecC
Confidence 357999988764110 223443333 35889999999999999875
No 105
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.12 E-value=4.9e-09 Score=89.49 Aligned_cols=184 Identities=9% Similarity=0.038 Sum_probs=115.9
Q ss_pred CcceEEE---ccCCCEEE-Eec-------------CCeEEEEecC----CceEEeee--------------ecCcCccCe
Q 022967 78 GPEDVCV---DRNGVLYT-ATR-------------DGWIKRLHKN----GTWENWKL--------------IGGDTLLGI 122 (289)
Q Consensus 78 ~p~~l~~---d~~g~l~v-~~~-------------~g~i~~~~~~----g~~~~~~~--------------~~~~p~~gl 122 (289)
.|.+|.+ |++|+||+ .+. ...|+++|.+ |+...... ....++ +|
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n-Dv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV-QS 142 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE-EE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc-ee
Confidence 4678999 78999996 432 5779999944 65443322 112477 99
Q ss_pred EEcCCCcEEEEeC-C-CceEEEeCCC--eEEEEecc-CCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCC
Q 022967 123 TTTQENEILVCDA-D-KGLLKVTEEG--VTVLASHV-NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPH 197 (289)
Q Consensus 123 ~~d~~g~l~v~~~-~-~~i~~~~~~g--~~~~~~~~-~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
++|++|+.||++. . ..|++++++| ...+.... .......++||++.|||++++...+ .
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-----------------~ 205 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-----------------P 205 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-----------------S
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-----------------C
Confidence 9999999999764 3 4599999888 44443222 1222346889999999975555422 3
Q ss_pred CEEEEEeCCCCeE--EEee--C---CCCCcceE-EEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCC--CCC
Q 022967 198 GKLLKYDPSLNET--SILL--D---SLFFANGV-ALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPG--GPD 267 (289)
Q Consensus 198 g~i~~~~~~~~~~--~~~~--~---~~~~p~gl-~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~ 267 (289)
++|+++|.+.-.. ..+. . .+..+.+| ....+|+.|+|++...+.+.....++ ...-+... ..++ .+.
T Consensus 206 g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg--W~sa~~~g-~~~~~~~~~ 282 (334)
T 2p9w_A 206 RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN--WKSANIKK-TKRSELQNS 282 (334)
T ss_dssp SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST--TSEEEEEE-EECGGGGSS
T ss_pred CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC--cceeEEee-eecCccccC
Confidence 7899999763211 1111 1 35677885 44558887799987656555555444 22222211 1111 167
Q ss_pred ceeeC------CCCCEEEEEe
Q 022967 268 NIKLA------PDGSFWIAIL 282 (289)
Q Consensus 268 ~i~~d------~~G~lwv~~~ 282 (289)
+++.+ .++++|+...
T Consensus 283 g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 283 GFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp CEEEEEEEEETTEEEEEEEEC
T ss_pred ceeEEEEeccccCCeEEEEee
Confidence 77776 6679999874
No 106
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.11 E-value=1e-08 Score=86.38 Aligned_cols=171 Identities=13% Similarity=0.025 Sum_probs=113.6
Q ss_pred CCCEEEEecCCeEEEEec-CCceEEeeeec--CcCccCeEEcCCCcEEEEeCCCceEEEeCCC-eEEEEeccCCccccCc
Q 022967 87 NGVLYTATRDGWIKRLHK-NGTWENWKLIG--GDTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHVNGSRINLA 162 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~~-~g~~~~~~~~~--~~p~~gl~~d~~g~l~v~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~ 162 (289)
++.|+++..+++|+.++. +|+........ ..++ ++++.++|+++++. .++++.+|.+| +..-... . .....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-~~~~~pdG~ilvs~-~~~V~~~d~~G~~~W~~~~-~--~~~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILFSY-SKGAKMITRDGRELWNIAA-P--AGCEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-EEEECTTSCEEEEC-BSEEEEECTTSCEEEEEEC-C--TTCEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-CeEECCCCCEEEeC-CCCEEEECCCCCEEEEEcC-C--CCccc
Confidence 444556668899999995 88765333322 2577 89999999999954 47899999777 3222221 1 01134
Q ss_pred cceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--CC----CCCcceEEEecCCCEEEEEe
Q 022967 163 DDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DS----LFFANGVALSKDEDYLVVCE 236 (289)
Q Consensus 163 ~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~----~~~p~gl~~~~d~~~l~v~~ 236 (289)
.+..+.+||++++++.. ..++|+.++++++.+..+. .. ...+.++++.++|+ +++++
T Consensus 80 ~~~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~ 142 (276)
T 3no2_A 80 QTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPL 142 (276)
T ss_dssp EEEEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEE
T ss_pred cccEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEe
Confidence 57788899999998642 1367888998755443332 11 23466788899998 67788
Q ss_pred CCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 237 TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 237 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
...++|..||.+|+.+ ..+ ..+..|.++.+..+|+++|+...+
T Consensus 143 ~~~~~v~~~d~~G~~~---w~~--~~~~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 143 FATSEVREIAPNGQLL---NSV--KLSGTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp TTTTEEEEECTTSCEE---EEE--ECSSCCCEEEECTTSCEEEECBTT
T ss_pred cCCCEEEEECCCCCEE---EEE--ECCCCccceeEcCCCCEEEEeCCC
Confidence 8889999999875422 112 112457778888888888876654
No 107
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.08 E-value=3.6e-08 Score=80.78 Aligned_cols=182 Identities=13% Similarity=0.074 Sum_probs=115.8
Q ss_pred EeccCCcCCcceEEEccCCCEEEEecC---CeEEEEe-cCCceEEeeeecCcC--ccCeEEcCCCcEEEEeCC-CceEEE
Q 022967 70 RLGEGILNGPEDVCVDRNGVLYTATRD---GWIKRLH-KNGTWENWKLIGGDT--LLGITTTQENEILVCDAD-KGLLKV 142 (289)
Q Consensus 70 ~~~~~~~~~p~~l~~d~~g~l~v~~~~---g~i~~~~-~~g~~~~~~~~~~~p--~~gl~~d~~g~l~v~~~~-~~i~~~ 142 (289)
..+-.+-..-.++.++. +.||+++.. ..|.++| .+|++.........+ . |++++ +++||+++.. +.++.+
T Consensus 14 ~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fge-Gi~~~-~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 14 RYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGA-GIVAW-RDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp EEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEE-EEEEE-TTEEEEEESSSSEEEEE
T ss_pred EcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCccee-EEEEe-CCEEEEEEeeCCEEEEE
Confidence 33334344456788885 899988743 4899999 678766544433443 4 66776 4689999865 458889
Q ss_pred e-CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe----eC
Q 022967 143 T-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL----LD 215 (289)
Q Consensus 143 ~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~----~~ 215 (289)
| ++. +..+.. .+ ...+++.+ .++||+++++ +.|+.+|+++.+.... ..
T Consensus 91 D~~tl~~~~ti~~--~~----~Gwglt~d-g~~L~vSdgs------------------~~l~~iDp~t~~~~~~I~V~~~ 145 (243)
T 3mbr_X 91 DLATLTPRARFRY--PG----EGWALTSD-DSHLYMSDGT------------------AVIRKLDPDTLQQVGSIKVTAG 145 (243)
T ss_dssp ETTTTEEEEEEEC--SS----CCCEEEEC-SSCEEEECSS------------------SEEEEECTTTCCEEEEEECEET
T ss_pred ECCcCcEEEEEeC--CC----CceEEeeC-CCEEEEECCC------------------CeEEEEeCCCCeEEEEEEEccC
Confidence 9 555 444422 11 23455543 3479999854 6899999987654322 11
Q ss_pred --CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceee---ee-------ccCCCCCCceeeCCCC-CEEEEE
Q 022967 216 --SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEI---FV-------ENLPGGPDNIKLAPDG-SFWIAI 281 (289)
Q Consensus 216 --~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~-------~~~~~~p~~i~~d~~G-~lwv~~ 281 (289)
.+.+.|.+.+. +| .+|+.....+.|.++|....+....-. +. ......++|||.|+++ ++||+.
T Consensus 146 g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 146 GRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 23456777765 45 499998888999999987543321111 00 0112467899999865 788875
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.07 E-value=2.7e-08 Score=88.26 Aligned_cols=179 Identities=15% Similarity=0.113 Sum_probs=121.9
Q ss_pred CCcceEEEccCCC-EEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeC--------CCceEEEe-
Q 022967 77 NGPEDVCVDRNGV-LYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA--------DKGLLKVT- 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~-l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~--------~~~i~~~~- 143 (289)
..+.+++++++|. +|++. .++.|..++ .+++..........+. +++++++|+ +|++.. ...|+.++
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPR-GLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEE-EEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCce-EEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 5688899999876 55555 678999999 4565443333345577 999999885 666652 23577888
Q ss_pred CCC-eEEEEeccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcc
Q 022967 144 EEG-VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~ 221 (289)
.++ ....... . ..+.+++++|+| .+|++... .+.|..+|.++++..........+.
T Consensus 291 ~~~~~~~~~~~-~----~~~~~~~~~~~g~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~ 348 (433)
T 3bws_A 291 DKEKLIDTIGP-P----GNKRHIVSGNTENKIYVSDMC-----------------CSKIEVYDLKEKKVQKSIPVFDKPN 348 (433)
T ss_dssp TTTEEEEEEEE-E----ECEEEEEECSSTTEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCCcEEeeccC-C----CCcceEEECCCCCEEEEEecC-----------------CCEEEEEECCCCcEEEEecCCCCCC
Confidence 556 3222211 1 246789999999 58887543 4789999998777655555556788
Q ss_pred eEEEecCCCEEEEEeCCC--------------CeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCE-EEEEe
Q 022967 222 GVALSKDEDYLVVCETFK--------------FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF-WIAIL 282 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l-wv~~~ 282 (289)
+++++|+++.+|++.... +.|+.||....+. ...+. . ...+.+++++++|+. +++..
T Consensus 349 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~--~~~~~-~-~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 349 TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV--KEFWE-A-GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE--EEEEE-C-SSSEEEEEECTTSCEEEEEET
T ss_pred eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE--EEEec-C-CCCCceEEEcCCCCEEEEEEC
Confidence 999999999999998754 3899998764322 12221 1 346788999999865 45543
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.06 E-value=2.1e-08 Score=89.40 Aligned_cols=205 Identities=13% Similarity=0.074 Sum_probs=117.5
Q ss_pred eeEeccCCcCCcceEEEccCCC-EEEEe----------cCCeEEEEe-cCCceEEeeee--------cCcCccCeEEcCC
Q 022967 68 VTRLGEGILNGPEDVCVDRNGV-LYTAT----------RDGWIKRLH-KNGTWENWKLI--------GGDTLLGITTTQE 127 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~g~-l~v~~----------~~g~i~~~~-~~g~~~~~~~~--------~~~p~~gl~~d~~ 127 (289)
+.+++.+ ..| ++++++||+ ||+++ .++.|..+| .+++....... ...|. ++++++|
T Consensus 112 v~~I~vG--~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spD 187 (426)
T 3c75_H 112 LGMTDGG--FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPD 187 (426)
T ss_dssp EEEEEEC--SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTT
T ss_pred EEEEECC--CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 3445445 458 999999775 88876 256799999 45554432222 24688 9999999
Q ss_pred C-cEEEEeCC--CceEEEe-CCC--eEEEEeccCCccccCccc----eEEcCCCcEEEeeCCC-cc--------Ccccc-
Q 022967 128 N-EILVCDAD--KGLLKVT-EEG--VTVLASHVNGSRINLADD----LIAATDGSIYFSVAST-KF--------GLHNW- 187 (289)
Q Consensus 128 g-~l~v~~~~--~~i~~~~-~~g--~~~~~~~~~~~~~~~~~~----l~~~~dG~lyv~~~~~-~~--------~~~~~- 187 (289)
| .+||++.. +.|..+| +++ +..+.- .+.....+.+ +.+.+||.+.+.+... +. .....
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p 265 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDEL 265 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSC
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCc
Confidence 8 59998753 5689999 666 333321 1111112222 5677788654443321 00 00000
Q ss_pred ----------ccccceecCCCEEEEEeCCCCeEEEeeC----------CCCCcce---EEEecCCCEEEEEeC-------
Q 022967 188 ----------GLDLLEAKPHGKLLKYDPSLNETSILLD----------SLFFANG---VALSKDEDYLVVCET------- 237 (289)
Q Consensus 188 ----------~~~~~~~~~~g~i~~~~~~~~~~~~~~~----------~~~~p~g---l~~~~d~~~l~v~~~------- 237 (289)
..........+.++.+|..++....... ....|.| +++++|++++||++.
T Consensus 266 ~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gth 345 (426)
T 3c75_H 266 LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKH 345 (426)
T ss_dssp BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCT
T ss_pred eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccc
Confidence 0001111223567777765444332210 0112444 899999999999964
Q ss_pred --CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 238 --FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 238 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
..+.|.++|....+... .+ ..+..|.+|+++.||+ +|+.++
T Consensus 346 k~~s~~VsVID~~T~kvv~--~I--~vg~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 346 KAASRFVVVLNAETGERIN--KI--ELGHEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp TSCEEEEEEEETTTCCEEE--EE--EEEEEECEEEECCSSSCEEEEEE
T ss_pred cCCCCEEEEEECCCCeEEE--EE--ECCCCcCeEEEccCCCEEEEEEc
Confidence 23579999977543321 11 1224699999999998 655554
No 110
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=3.5e-08 Score=87.65 Aligned_cols=189 Identities=13% Similarity=0.095 Sum_probs=112.9
Q ss_pred cCCcceEEEccCCCEEEEe-cC------CeEEEEe-cCCceEEeeeecCc----CccCeEEcCCCcEEEEeC--------
Q 022967 76 LNGPEDVCVDRNGVLYTAT-RD------GWIKRLH-KNGTWENWKLIGGD----TLLGITTTQENEILVCDA-------- 135 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~-~~------g~i~~~~-~~g~~~~~~~~~~~----p~~gl~~d~~g~l~v~~~-------- 135 (289)
...|..+...++| ||++. .+ |+|..+| .++++......... +. .+.+.++++++++..
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHHT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCccccc
Confidence 3479999999999 98754 32 6899999 44554432222222 33 466678887666552
Q ss_pred ------------CCceEEEe-CCC--eEEEEeccCCccccCccceEE--cCCCc-EEEeeCCCccCccccccccceecCC
Q 022967 136 ------------DKGLLKVT-EEG--VTVLASHVNGSRINLADDLIA--ATDGS-IYFSVASTKFGLHNWGLDLLEAKPH 197 (289)
Q Consensus 136 ------------~~~i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~--~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
++.|..++ .++ ...+.. +.....|..|.+ +|+|+ +|++..-. ...-.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v---g~~g~~P~~i~f~~~Pdg~~aYV~~e~~------------~~~Ls 279 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL---GEENRMALELRPLHDPTKLMGFINMVVS------------LKDLS 279 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEES---CTTEEEEEEEEECSSTTCCEEEEEEEEE------------TTTCC
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEec---CCCCCccceeEeeECCCCCEEEEEEeee------------ccCCC
Confidence 46788888 556 333221 111235667766 89984 78875300 00012
Q ss_pred CEEEEEeCCCCeEEEe-----eC----C------------CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC-CCcce
Q 022967 198 GKLLKYDPSLNETSIL-----LD----S------------LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE-SKEQT 255 (289)
Q Consensus 198 g~i~~~~~~~~~~~~~-----~~----~------------~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~-~~~~~ 255 (289)
+.|+.+..+.++++.. .. + ...|.+|.+++|+++|||++.+.+.|.+|+++.. +....
T Consensus 280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv 359 (462)
T 2ece_A 280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLT 359 (462)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 3444433323433211 11 0 2458899999999999999999999999998633 22111
Q ss_pred e-eeec------------cCCCCCCceeeCCCCC-EEEEE
Q 022967 256 E-IFVE------------NLPGGPDNIKLAPDGS-FWIAI 281 (289)
Q Consensus 256 ~-~~~~------------~~~~~p~~i~~d~~G~-lwv~~ 281 (289)
. .... .+.+.|++++++.||+ +||+.
T Consensus 360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1 1111 1223699999999994 67776
No 111
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.03 E-value=6.2e-08 Score=84.72 Aligned_cols=75 Identities=8% Similarity=0.114 Sum_probs=53.6
Q ss_pred CEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 198 GKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 198 g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
+.|+.+|.++++......... |.+++++|||++||+++. +.|.+||.++.++...... ......|.+++++++|+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i-~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTI-EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEE-TTSCSSEEEEEECCCSC
T ss_pred ceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEe-ccCCCCcEEEEecCCCC
Confidence 468888888776554333334 999999999999999974 8999999775422222222 23446799999999885
No 112
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.02 E-value=5.2e-08 Score=89.99 Aligned_cols=177 Identities=11% Similarity=-0.030 Sum_probs=119.0
Q ss_pred EEccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCCCceEEEeC--CCeEEEEeccCCc
Q 022967 83 CVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVTE--EGVTVLASHVNGS 157 (289)
Q Consensus 83 ~~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~~--~g~~~~~~~~~~~ 157 (289)
+++++|.+|++. .++.|..+| .+++..........++ +++++++|+ ||+++.++.|..+|. ...+.+.....+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g- 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG- 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-
Confidence 478888999766 678899999 5666543333233477 999999985 888887667888884 222222111111
Q ss_pred cccCccceEEcC----CCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC------------CCCc
Q 022967 158 RINLADDLIAAT----DGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS------------LFFA 220 (289)
Q Consensus 158 ~~~~~~~l~~~~----dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~------------~~~p 220 (289)
..+.+++++| ||+ +|++... .+.|..+|.++++....... ...+
T Consensus 222 --~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 222 --IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred --CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 3578999999 985 7777531 25678888877664433221 1245
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 221 ~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
.+++++++++.+|++....+.|..+|....+...... + ....+|.+++++++|+ ++++..
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~-i-~~~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS-I-GAAPFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEE-E-ECCSSCCCEEECTTSCEEEEEEG
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEE-e-ccCcCccCceECCCCCEEEEEec
Confidence 6889999999999999999999999987543222111 2 2245789999999997 566654
No 113
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.01 E-value=4.8e-08 Score=83.22 Aligned_cols=150 Identities=9% Similarity=0.024 Sum_probs=97.1
Q ss_pred EEEEecCCeEEEEe-cCCceEEeeeecC---cCccCeEEcCCC-cEEEEeCC-CceEEEe-CCC-e-EEEEeccCCcccc
Q 022967 90 LYTATRDGWIKRLH-KNGTWENWKLIGG---DTLLGITTTQEN-EILVCDAD-KGLLKVT-EEG-V-TVLASHVNGSRIN 160 (289)
Q Consensus 90 l~v~~~~g~i~~~~-~~g~~~~~~~~~~---~p~~gl~~d~~g-~l~v~~~~-~~i~~~~-~~g-~-~~~~~~~~~~~~~ 160 (289)
++++..++.|..++ .+++......... .|. +++++++| .+|++... ..|+.++ .++ . ..+.....+....
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPM-VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCC-CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc-ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 44556788999999 4565544333334 588 99999998 47888754 4688888 666 3 3332211111112
Q ss_pred CccceEEcCCC-cEEEeeCCCccCccccccccceec-CCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCC
Q 022967 161 LADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAK-PHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF 238 (289)
Q Consensus 161 ~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~ 238 (289)
.+.++++++|| .+|++....... . .+.. ..+.|+.+|.++++..........+.+++++||+++||++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~-~------~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLE-L------THFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEEC-S------SCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE---
T ss_pred cccceEECCCCCEEEEEecccccc-c------ccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe---
Confidence 57799999999 588874210000 0 0000 1368999999877765444445678999999999999999
Q ss_pred CCeEEEEEecCC
Q 022967 239 KFRCLKYWLKGE 250 (289)
Q Consensus 239 ~~~i~~~~~~~~ 250 (289)
.+.|++||+.+.
T Consensus 153 ~~~i~~~d~~~~ 164 (337)
T 1pby_B 153 GRDLHVMDPEAG 164 (337)
T ss_dssp SSSEEEEETTTT
T ss_pred CCeEEEEECCCC
Confidence 367999998654
No 114
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.94 E-value=1.2e-07 Score=87.42 Aligned_cols=183 Identities=14% Similarity=0.149 Sum_probs=116.8
Q ss_pred cceEEEccCCC-EEEEecCCeEEEEec---CCceEEeeeecCcCccCeEEcC----CCc-EEEEeC-CCceEEEe-CCC-
Q 022967 79 PEDVCVDRNGV-LYTATRDGWIKRLHK---NGTWENWKLIGGDTLLGITTTQ----ENE-ILVCDA-DKGLLKVT-EEG- 146 (289)
Q Consensus 79 p~~l~~d~~g~-l~v~~~~g~i~~~~~---~g~~~~~~~~~~~p~~gl~~d~----~g~-l~v~~~-~~~i~~~~-~~g- 146 (289)
|.+++++++|+ ||+++.++.|..++. +++.......+..|. ++++++ +|+ +|+++. ...+..+| .++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 78899999875 678888899999996 344333233456688 999998 885 777764 35677788 555
Q ss_pred -eEEEEec---cCCc---cccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE--eeCC
Q 022967 147 -VTVLASH---VNGS---RINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI--LLDS 216 (289)
Q Consensus 147 -~~~~~~~---~~~~---~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~--~~~~ 216 (289)
+..+... .... +...+.++.+++++. +|++.. ..+.|+.+|..+.+... ....
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----------------~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----------------ETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEECTTSSSCEEEEEEC
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------CCCeEEEEEecCCCcceeEEecc
Confidence 4433211 0100 112456889999775 555543 35789999876543211 1233
Q ss_pred CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeee-ccCCCCC-Ccee-eCCC-CCEEEEEe
Q 022967 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGP-DNIK-LAPD-GSFWIAIL 282 (289)
Q Consensus 217 ~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~p-~~i~-~d~~-G~lwv~~~ 282 (289)
..+|.+++|+||++++|++....+.|.++|....++.. .+. ...+ .| .+.. .+.+ |.+|++..
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~--~i~~g~~p-h~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA--LVDVGKTP-HPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE--EEECSSSB-CCTTCEEEEETTTEEEEEEEB
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE--eeccCCCC-CCCCCcccCCCCCccEEEecc
Confidence 56789999999999999998888999999977543321 111 1111 12 2333 3555 67888764
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.93 E-value=1.2e-07 Score=84.14 Aligned_cols=164 Identities=18% Similarity=0.218 Sum_probs=110.6
Q ss_pred CCcceEEEccCCC-EEEEe--------cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC-CceEEEe-
Q 022967 77 NGPEDVCVDRNGV-LYTAT--------RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT- 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~-l~v~~--------~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~- 143 (289)
..|.+++++++|+ ||++. .++.|+.++ .+++..........+. +++++++|+ +|++... ..+..++
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKR-HIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEE-EEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcc-eEEECCCCCEEEEEecCCCEEEEEEC
Confidence 3478899999885 56665 367899999 4565544433345677 899999984 8887544 5577788
Q ss_pred CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcc
Q 022967 144 EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~ 221 (289)
.++ ....... ...+.+++++++|. +|++....... ....+..+...|.|+.+|.++++..........+.
T Consensus 333 ~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~~---~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~ 404 (433)
T 3bws_A 333 KEKKVQKSIPV-----FDKPNTIALSPDGKYLYVSCRGPNHP---TEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPT 404 (433)
T ss_dssp TTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEECCCCCT---TTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCCcEEEEecC-----CCCCCeEEEcCCCCEEEEEecCCCcc---ccccccccccceEEEEEECCCCcEEEEecCCCCCc
Confidence 556 3222221 13467999999996 77775431000 00011122234689999998877665555566789
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+++++||++.|+++....+.|..|++++
T Consensus 405 ~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 405 GLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred eEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999999999987789999998764
No 116
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.92 E-value=2.9e-07 Score=76.33 Aligned_cols=160 Identities=9% Similarity=0.069 Sum_probs=103.3
Q ss_pred EeccCCcCCcceEEEccCCCEEEEe-cCCeEEEEe--cCCceE---Eeeeec-CcC----ccCeEEcCCC-cEEEEeCC-
Q 022967 70 RLGEGILNGPEDVCVDRNGVLYTAT-RDGWIKRLH--KNGTWE---NWKLIG-GDT----LLGITTTQEN-EILVCDAD- 136 (289)
Q Consensus 70 ~~~~~~~~~p~~l~~d~~g~l~v~~-~~g~i~~~~--~~g~~~---~~~~~~-~~p----~~gl~~d~~g-~l~v~~~~- 136 (289)
.++.+....+|+|+++.+|.+|+++ .+++++.++ .++... ...... ..+ ..||++|+++ +||++...
T Consensus 63 ~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 63 TIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp EEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred EEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC
Confidence 4443445789999999999888765 668888887 344322 111111 112 1389999876 79998643
Q ss_pred -CceEEEe--CCC--eEEEEec--cCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC
Q 022967 137 -KGLLKVT--EEG--VTVLASH--VNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (289)
Q Consensus 137 -~~i~~~~--~~g--~~~~~~~--~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 208 (289)
.++++++ ..+ ++++... ........+.+++++| .|++|+.... ...|+.+|.++.
T Consensus 143 p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~-----------------s~~L~~~d~~g~ 205 (255)
T 3qqz_A 143 PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE-----------------SRALQEVTLVGE 205 (255)
T ss_dssp SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT-----------------TTEEEEECTTCC
T ss_pred CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC-----------------CCeEEEEcCCCC
Confidence 2688887 222 4443221 0111234578999999 5789987643 367999998854
Q ss_pred eEEEe--eCC-------CCCcceEEEecCCCEEEEEeCCCCeEEEEEec
Q 022967 209 ETSIL--LDS-------LFFANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 209 ~~~~~--~~~-------~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
....+ ..+ ...|.||+++++|+ |||+.-. +.+|+|...
T Consensus 206 ~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~-n~~y~f~~~ 252 (255)
T 3qqz_A 206 VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEP-NRFYRFTPQ 252 (255)
T ss_dssp EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETT-TEEEEEEC-
T ss_pred EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCC-ceEEEEEec
Confidence 33322 111 46889999999998 9999655 799999653
No 117
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.88 E-value=8.6e-08 Score=82.17 Aligned_cols=139 Identities=15% Similarity=0.089 Sum_probs=94.2
Q ss_pred CeEEcCCCcEEEEeCC-CceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecC
Q 022967 121 GITTTQENEILVCDAD-KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKP 196 (289)
Q Consensus 121 gl~~d~~g~l~v~~~~-~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~ 196 (289)
|+++..++.+|++... ..|+.+| .++ ....... . ....+.++++++||+ +|++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~--~~~~~~~~~~s~dg~~~~v~~~~----------------- 63 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-P--DKFGPGTAMMAPDNRTAYVLNNH----------------- 63 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-S--SCCSSCEEEECTTSSEEEEEETT-----------------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec-C--CCCCCceeEECCCCCEEEEEeCC-----------------
Confidence 8888888889988654 5688888 666 3222221 1 112477999999996 7887642
Q ss_pred CCEEEEEeCCCCeEEEeeCC-------CCCcceEEEecCCCEEEEEeCC-----------CCeEEEEEecCCCCcc-eee
Q 022967 197 HGKLLKYDPSLNETSILLDS-------LFFANGVALSKDEDYLVVCETF-----------KFRCLKYWLKGESKEQ-TEI 257 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~~~~-------~~~p~gl~~~~d~~~l~v~~~~-----------~~~i~~~~~~~~~~~~-~~~ 257 (289)
.+.|+.+|.++++....... ...+.+++++||++++|++... .+.|++||+.+..... ...
T Consensus 64 ~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 143 (349)
T 1jmx_B 64 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT 143 (349)
T ss_dssp TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE
T ss_pred CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee
Confidence 46899999987775433221 2347899999999999998743 5789999987533222 122
Q ss_pred eeccCCCCCCceeeCCCCCEEEEE
Q 022967 258 FVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 258 ~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
+ ..+..+.+++++++|++|++.
T Consensus 144 ~--~~~~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 144 F--PMPRQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp E--ECCSSCCCEEECTTSCEEEES
T ss_pred c--cCCCcccceeECCCCcEEEcc
Confidence 2 122356778899999988853
No 118
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.87 E-value=4.6e-07 Score=83.98 Aligned_cols=186 Identities=15% Similarity=0.132 Sum_probs=117.4
Q ss_pred CCcceEEEccCCC-EEEEecCCeEEEEec---CCceEEeeeecCcCccCeEEc----CCCc-EEEEeCC-CceEEEe-CC
Q 022967 77 NGPEDVCVDRNGV-LYTATRDGWIKRLHK---NGTWENWKLIGGDTLLGITTT----QENE-ILVCDAD-KGLLKVT-EE 145 (289)
Q Consensus 77 ~~p~~l~~d~~g~-l~v~~~~g~i~~~~~---~g~~~~~~~~~~~p~~gl~~d----~~g~-l~v~~~~-~~i~~~~-~~ 145 (289)
..|++++++++|+ +|+++.++.|..+|. +++...-...+..|. +++++ +||+ +|+++.. +.+..+| .+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 4688999999886 688888899999995 454443334456788 99999 5884 8887654 5677788 44
Q ss_pred C--eEEEEe-cc--CCc---cccCccceEEcCCCcE-EEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe--e
Q 022967 146 G--VTVLAS-HV--NGS---RINLADDLIAATDGSI-YFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL--L 214 (289)
Q Consensus 146 g--~~~~~~-~~--~~~---~~~~~~~l~~~~dG~l-yv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~--~ 214 (289)
. +..+.. .. .+. +...+.++...+++.. +++.. ..|.|+.+|....+...+ .
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-----------------~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-----------------ETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEETTCSSEEEEEEE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-----------------CCCeEEEEecCCCccceeeee
Confidence 4 333321 11 110 0113346777777654 44432 357899998764321111 2
Q ss_pred CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeee-ccCCCCC-Ccee-eCCC-CCEEEEEe
Q 022967 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGP-DNIK-LAPD-GSFWIAIL 282 (289)
Q Consensus 215 ~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~p-~~i~-~d~~-G~lwv~~~ 282 (289)
....++.++.|++|++++|+++...++|.++|....++... .-. ...+ .| ++.. ++.+ |.+|++..
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~ 408 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-EDTGGQTP-HPGRGANFVHPTFGPVWATSH 408 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-EECSSSSB-CCTTCEEEEETTTEEEEEEEB
T ss_pred eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-EeccCcCC-CCccceeeECCCCCcEEEeCC
Confidence 33467888999999999999999999999999875433211 111 1111 22 3544 4665 68898764
No 119
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.85 E-value=2.1e-06 Score=75.32 Aligned_cols=204 Identities=15% Similarity=0.058 Sum_probs=109.8
Q ss_pred eEeccCCcCCcceEEEccCCC-EEEEec----------CCeEEEEec-CCceEEeeee--------cCcCccCeEEcCCC
Q 022967 69 TRLGEGILNGPEDVCVDRNGV-LYTATR----------DGWIKRLHK-NGTWENWKLI--------GGDTLLGITTTQEN 128 (289)
Q Consensus 69 ~~~~~~~~~~p~~l~~d~~g~-l~v~~~----------~g~i~~~~~-~g~~~~~~~~--------~~~p~~gl~~d~~g 128 (289)
..++.+ ..| ++++.+||+ ||+++. ++.|.++|. +++....... ...|. ++++++||
T Consensus 61 ~~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG 136 (373)
T 2mad_H 61 GHVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNN 136 (373)
T ss_pred EEecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCC
Confidence 445555 468 999999875 788752 467889984 4443222111 23578 99999998
Q ss_pred c-EEEEeCC--CceEEEeCCC--e-EEEEeccCCccccCccc----eEEcCCCcEEEeeCCCccC-c--------c-cc-
Q 022967 129 E-ILVCDAD--KGLLKVTEEG--V-TVLASHVNGSRINLADD----LIAATDGSIYFSVASTKFG-L--------H-NW- 187 (289)
Q Consensus 129 ~-l~v~~~~--~~i~~~~~~g--~-~~~~~~~~~~~~~~~~~----l~~~~dG~lyv~~~~~~~~-~--------~-~~- 187 (289)
+ ||+++.. +.|..+| .. + ..+.. .++.....+.+ +...+||.+.+.+...+.- . . ..
T Consensus 137 ~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred CEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcce
Confidence 5 8888742 5688888 54 2 22011 11110001111 3444666543333210000 0 0 00
Q ss_pred ---------ccccceecCCCEEEEEeCCCCeEEEee----------CCCCCcce---EEEecCCCEEEEEeC--------
Q 022967 188 ---------GLDLLEAKPHGKLLKYDPSLNETSILL----------DSLFFANG---VALSKDEDYLVVCET-------- 237 (289)
Q Consensus 188 ---------~~~~~~~~~~g~i~~~~~~~~~~~~~~----------~~~~~p~g---l~~~~d~~~l~v~~~-------- 237 (289)
....+.....+.++.+|..++...... .....|.| +++++|++++|++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~ 294 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred eecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccccc
Confidence 000001112345677776543322111 11123555 889999999999854
Q ss_pred -CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 238 -FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 238 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
..+.|+++|.++.+.. .. + ..++.|.++++++||+ +|+.+.
T Consensus 295 ~~~~~V~VID~~t~~vv--~~-i-~~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 295 AAAKEVTSVTGLVGQTS--SQ-I-SLGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred CCCCeEEEEECCCCEEE--EE-E-ECCCCcCeEEECCCCCeEEEEEc
Confidence 2357999997654321 12 2 3345799999999998 555554
No 120
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.84 E-value=6.1e-07 Score=78.80 Aligned_cols=205 Identities=15% Similarity=0.105 Sum_probs=113.9
Q ss_pred eeEeccCCcCCcceEEEccCCC-EEEEe----------cCCeEEEEe-cCCceEEeeee--------cCcCccCeEEcCC
Q 022967 68 VTRLGEGILNGPEDVCVDRNGV-LYTAT----------RDGWIKRLH-KNGTWENWKLI--------GGDTLLGITTTQE 127 (289)
Q Consensus 68 ~~~~~~~~~~~p~~l~~d~~g~-l~v~~----------~~g~i~~~~-~~g~~~~~~~~--------~~~p~~gl~~d~~ 127 (289)
+.+++.| ..|. +++++||+ +|+++ .++.|.++| .+++....... ...|. ++++++|
T Consensus 72 ~~~I~vG--~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spD 147 (386)
T 3sjl_D 72 IGMIDGG--FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPD 147 (386)
T ss_dssp EEEEEEC--SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTT
T ss_pred EEEEECC--CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCC
Confidence 3445555 4585 99999875 88876 246699998 45554332221 23688 9999999
Q ss_pred Cc-EEEEeC--CCceEEEe-CCC--eEEEEeccCCccccCccc----eEEcCCCcEEEeeCCC--cc-----Ccccccc-
Q 022967 128 NE-ILVCDA--DKGLLKVT-EEG--VTVLASHVNGSRINLADD----LIAATDGSIYFSVAST--KF-----GLHNWGL- 189 (289)
Q Consensus 128 g~-l~v~~~--~~~i~~~~-~~g--~~~~~~~~~~~~~~~~~~----l~~~~dG~lyv~~~~~--~~-----~~~~~~~- 189 (289)
|+ +||++. .+.+..+| .++ +..+. .++.....|.+ +++.+||.+.+.+... +. ...+...
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~vv~tI~--v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~ 225 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAFKRMLD--VPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 225 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEE--CCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTS
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcEEEEEE--CCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccc
Confidence 95 899975 35688899 666 33332 11111112323 3777888654444321 11 0000000
Q ss_pred -------------ccceecCCCEEEEEeCCCCeEEEeeC----------CCCCc---ceEEEecCCCEEEEEeC------
Q 022967 190 -------------DLLEAKPHGKLLKYDPSLNETSILLD----------SLFFA---NGVALSKDEDYLVVCET------ 237 (289)
Q Consensus 190 -------------~~~~~~~~g~i~~~~~~~~~~~~~~~----------~~~~p---~gl~~~~d~~~l~v~~~------ 237 (289)
..+.....+.++.+|..++..++... ....| ..++++++++++|++..
T Consensus 226 ~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 226 FLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR 305 (386)
T ss_dssp CBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC
T ss_pred cccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccc
Confidence 00111223455666665443222210 01113 34788999999999853
Q ss_pred ---CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC--EEEEEe
Q 022967 238 ---FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS--FWIAIL 282 (289)
Q Consensus 238 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~--lwv~~~ 282 (289)
..++|+++|....+.... + .++..|.+|+++.||. ||++..
T Consensus 306 hk~~~~~V~viD~~t~kv~~~--i--~vg~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 306 HKTASRFVVVLDAKTGERLAK--F--EMGHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp TTSCEEEEEEEETTTCCEEEE--E--EEEEEECEEEECSSSSCEEEEEET
T ss_pred cCCCCCEEEEEECCCCeEEEE--E--ECCCCcceEEECCCCCeEEEEEcC
Confidence 136799999876543221 1 1123578999999985 455444
No 121
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.83 E-value=2.3e-07 Score=80.61 Aligned_cols=103 Identities=9% Similarity=0.109 Sum_probs=76.8
Q ss_pred eEeccCCcCCcceEEEccCCCEEEEec------------------CCeEEEEecCCceEEeeeecCcCccCeEEcCCC-c
Q 022967 69 TRLGEGILNGPEDVCVDRNGVLYTATR------------------DGWIKRLHKNGTWENWKLIGGDTLLGITTTQEN-E 129 (289)
Q Consensus 69 ~~~~~~~~~~p~~l~~d~~g~l~v~~~------------------~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~~g-~ 129 (289)
..+....+..|.+++++++|++|+++. .|+|+++++ ++.+........|+ ||++++|| .
T Consensus 157 ~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-~~~~~~~~~l~~pN-Gia~spDg~~ 234 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-NDVRVVAEGFDFAN-GINISPDGKY 234 (355)
T ss_dssp EEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-TCCEEEEEEESSEE-EEEECTTSSE
T ss_pred eccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-CeEEEeecCCcccC-cceECCCCCE
Confidence 344434578899999999999998752 368999986 46666666678899 99999998 6
Q ss_pred EEEEeCC-CceEEEe--CCC-eEE--EEeccCCccccCccceEEcC-CCcEEEeeC
Q 022967 130 ILVCDAD-KGLLKVT--EEG-VTV--LASHVNGSRINLADDLIAAT-DGSIYFSVA 178 (289)
Q Consensus 130 l~v~~~~-~~i~~~~--~~g-~~~--~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~ 178 (289)
|||++.. +.|++++ .+| +.. .. ... ..|.++++|+ +|++|++..
T Consensus 235 lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~----g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHANWTLTPLRVL-SFD----TLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECS----SEEEEEEECTTTCCEEEEEE
T ss_pred EEEEeCCCCeEEEEEECCCCcEecCEEE-eCC----CCCceEEEeCCCCcEEEEec
Confidence 9999865 5688888 456 322 11 121 4689999999 599999753
No 122
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.73 E-value=9.8e-06 Score=68.63 Aligned_cols=177 Identities=9% Similarity=0.021 Sum_probs=111.9
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEec-CCce--E-EeeeecCcCccCeEEcCCCcEEE-EeCCCceEEEe-CCC--eE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHK-NGTW--E-NWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VT 148 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~-~g~~--~-~~~~~~~~p~~gl~~d~~g~l~v-~~~~~~i~~~~-~~g--~~ 148 (289)
...++++.+++++. ++..++.|..++. +++. . .+........ .+++.+++++++ +.....+..++ .++ ..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 35668899988754 6778899999983 4432 1 1222223344 889998887554 44445678888 555 33
Q ss_pred EEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecC
Q 022967 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKD 228 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d 228 (289)
.+.. . ......+++.++|..+++... .+.|..+|.++++.............++++|+
T Consensus 178 ~~~~-~----~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 178 QFQG-H----TDGASCIDISNDGTKLWTGGL-----------------DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EECC-C----SSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred eeec-c----cCceEEEEECCCCCEEEEEec-----------------CCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 3311 1 124678999999976555322 47889999887765544444445678899999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
++.++++. ..+.|..|++..... ..+ .........++..++|.+.++..
T Consensus 236 ~~~l~~~~-~~~~i~~~~~~~~~~---~~~-~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 236 GEWLAVGM-ESSNVEVLHVNKPDK---YQL-HLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp SSEEEEEE-TTSCEEEEETTSSCE---EEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEc-CCCcEEEEECCCCCe---EEE-cCCccceeEEEECCCCCEEEEec
Confidence 99777775 457899999875432 111 12224456688888887655543
No 123
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.73 E-value=5.4e-08 Score=88.49 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=57.4
Q ss_pred ccccCccceEEcCCCcEEE-eeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC--CCCcceEEEecCCCEEE
Q 022967 157 SRINLADDLIAATDGSIYF-SVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLV 233 (289)
Q Consensus 157 ~~~~~~~~l~~~~dG~lyv-~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~--~~~p~gl~~~~d~~~l~ 233 (289)
..++.|++|+++++|+||| +|.. ++.. ...+......+|++++++++++.++.. ...|+|++|+||+++||
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~--~~~~----g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGD--SSNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCC--CCCS----GGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCC--cCcc----ccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 4678999999999999999 7765 2211 111223456899999988998888754 45689999999999999
Q ss_pred EEeC
Q 022967 234 VCET 237 (289)
Q Consensus 234 v~~~ 237 (289)
|+-.
T Consensus 547 V~vQ 550 (592)
T 4a9v_A 547 VGIQ 550 (592)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9854
No 124
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.72 E-value=5.4e-06 Score=70.26 Aligned_cols=176 Identities=9% Similarity=-0.007 Sum_probs=112.8
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTVL 150 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~~ 150 (289)
...++++.++++++ ++..+|.|..++ .+++... +........ .++++++++.+++ .....+..++ .++ ...+
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 221 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS-CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH 221 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceE-EEEECCCCCEEEEEecCCcEEEEECCCCceEeee
Confidence 35678888887755 677889999999 4454332 222233445 8999988865554 4445577778 555 3322
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED 230 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~ 230 (289)
. .. .....+++.|+|.++++... .+.|..+|.++++...+.........++++++++
T Consensus 222 -~-~~----~~v~~~~~s~~~~~l~~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 222 -D-FT----SQIFSLGYCPTGEWLAVGME-----------------SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278 (337)
T ss_dssp -E-CS----SCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSS
T ss_pred -c-CC----CceEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCCeEEEcCCccceeEEEECCCCC
Confidence 1 11 24568899999975554322 3678888888776655544455678899999999
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
.|+.+. ..+.|..|++...... +..........++...+|++.++..
T Consensus 279 ~l~~~~-~dg~i~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 279 WFVSTG-KDNLLNAWRTPYGASI----FQSKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp EEEEEE-TTSEEEEEETTTCCEE----EEEECSSCEEEEEECTTSCEEEEEE
T ss_pred EEEEec-CCCcEEEEECCCCeEE----EEecCCCcEEEEEECCCCCEEEEec
Confidence 666654 4688999997654321 1112234456788888887655443
No 125
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.71 E-value=4e-06 Score=69.46 Aligned_cols=175 Identities=11% Similarity=0.024 Sum_probs=106.6
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cC-CceEEeeeec--CcCccCeEEcCCCcEEEEeC-----CCceEEEe-CCC
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KN-GTWENWKLIG--GDTLLGITTTQENEILVCDA-----DKGLLKVT-EEG 146 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~-g~~~~~~~~~--~~p~~gl~~d~~g~l~v~~~-----~~~i~~~~-~~g 146 (289)
....++++.++|+.++...++.|+.++ .+ ++........ .... .+++.++|+.+++.. ...|+.++ .++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGG 120 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence 456789999999977555688999999 44 5554443322 3345 899999997544432 24578887 445
Q ss_pred -eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEE
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~ 224 (289)
...+... .....+++.|||+ |+++... ...-.||.++.++++...+.........++
T Consensus 121 ~~~~~~~~------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 121 TPRLMTKN------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPD 179 (297)
T ss_dssp CCEECCSS------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEE
T ss_pred ceEEeecC------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccce
Confidence 4443221 1256788999996 5544321 112368888887777766655555678899
Q ss_pred EecCCCEEEEEeC--CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCE
Q 022967 225 LSKDEDYLVVCET--FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (289)
Q Consensus 225 ~~~d~~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 277 (289)
|+|+++.++++.. +..+|+.++..+... ..+. ........++.+.+|+.
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~---~~~~-~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSSV---ERIT-DSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCE---EECC-CCSEEEEEEEECTTSSE
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCCc---EEEe-cCCcccCCeEECCCCCE
Confidence 9999998887754 344566665444322 1111 11122334666777753
No 126
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.70 E-value=7.3e-07 Score=78.06 Aligned_cols=204 Identities=12% Similarity=-0.047 Sum_probs=111.4
Q ss_pred ceeEeccCCcCCcceEEEccCC-CEEEEe----------cCCeEEEEe-cCCceEEeeeec--------CcCccCeEEcC
Q 022967 67 SVTRLGEGILNGPEDVCVDRNG-VLYTAT----------RDGWIKRLH-KNGTWENWKLIG--------GDTLLGITTTQ 126 (289)
Q Consensus 67 ~~~~~~~~~~~~p~~l~~d~~g-~l~v~~----------~~g~i~~~~-~~g~~~~~~~~~--------~~p~~gl~~d~ 126 (289)
.+.+++.+ ..| ++++++|| .+|+++ .++.|..+| .+++.......+ ..|. ++++++
T Consensus 58 v~~~i~vG--~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~Sp 133 (368)
T 1mda_H 58 TLGHSLGA--FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCA 133 (368)
T ss_dssp EEEEEEEC--TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECT
T ss_pred EEEEEeCC--CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcC
Confidence 34556666 358 89999976 588886 257799999 556544332222 4699 999999
Q ss_pred CC-cEEEEeCC--CceEE--Ee-CCCeEEEEeccCCccccCccc----eEEcCCCcEEEeeCCC------ccCc------
Q 022967 127 EN-EILVCDAD--KGLLK--VT-EEGVTVLASHVNGSRINLADD----LIAATDGSIYFSVAST------KFGL------ 184 (289)
Q Consensus 127 ~g-~l~v~~~~--~~i~~--~~-~~g~~~~~~~~~~~~~~~~~~----l~~~~dG~lyv~~~~~------~~~~------ 184 (289)
|| .+||++.. +.+.. +| .+ +..+. ..+.....+.+ ++..+||.+.+.+... +...
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~t-v~~i~--v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i 210 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASD-DQLTK--SASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ 210 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEE-EEEEE--CSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTS
T ss_pred CCCEEEEEccCCCCeEEEEEEchhh-ceEEE--CCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeee
Confidence 99 59999753 33555 55 22 22221 11100011111 3344555433333221 0000
Q ss_pred ----cc----cccccceecCCCEEEEEeCCCCeEEEeeC----------CCCCcce---EEEecCCCEEEEEeC---C--
Q 022967 185 ----HN----WGLDLLEAKPHGKLLKYDPSLNETSILLD----------SLFFANG---VALSKDEDYLVVCET---F-- 238 (289)
Q Consensus 185 ----~~----~~~~~~~~~~~g~i~~~~~~~~~~~~~~~----------~~~~p~g---l~~~~d~~~l~v~~~---~-- 238 (289)
.. .....+.... +.++.+|..++..+.... ....|.| +++++|++++||+.. +
T Consensus 211 ~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~ 289 (368)
T 1mda_H 211 NCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSC 289 (368)
T ss_dssp CBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCT
T ss_pred eCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcc
Confidence 00 0000011112 557777765433222211 1223555 889999999999854 3
Q ss_pred ---CCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 239 ---KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 239 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
...+.++|....+... .+ ..+..|.+|++++||. +|++..
T Consensus 290 ~~~~~~~~ViD~~t~~vv~--~i--~vg~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 290 LAAAENTSSVTASVGQTSG--PI--SNGHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp TSCEEEEEEEESSSCCEEE--CC--EEEEEECEEEECCSSSCEEEEEE
T ss_pred cccCCCEEEEECCCCeEEE--EE--ECCCCcceEEECCCCCEEEEEcc
Confidence 3467788876543221 11 1223699999999995 899987
No 127
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.69 E-value=2.1e-06 Score=79.56 Aligned_cols=175 Identities=11% Similarity=-0.055 Sum_probs=114.6
Q ss_pred EccCCCEEEEe-cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCCCceEEEe-C--CCeEEEEeccCCc
Q 022967 84 VDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-E--EGVTVLASHVNGS 157 (289)
Q Consensus 84 ~d~~g~l~v~~-~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~--~g~~~~~~~~~~~ 157 (289)
.|+++.+|+.. .++.|..+| .+++.......+..|+ ++++++||+ +|+++....|..+| . ++ +.+.....+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G- 239 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG- 239 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC-
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC-
Confidence 45556778766 678999999 4566554444556788 999999986 88888666799999 4 34 222121122
Q ss_pred cccCccceEEc----CCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-C-----------CCCc
Q 022967 158 RINLADDLIAA----TDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-S-----------LFFA 220 (289)
Q Consensus 158 ~~~~~~~l~~~----~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~-----------~~~p 220 (289)
..|.+++++ ||| .+|+++.. .+.+..+|..+.+...... . ....
T Consensus 240 --~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 240 --SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred --CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 257899999 698 58888642 3678888987665433211 1 1123
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCE-EEEEe
Q 022967 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF-WIAIL 282 (289)
Q Consensus 221 ~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l-wv~~~ 282 (289)
.++..++++..++++....++|+.+|....+...... + ....+|.++.+|.+|++ |++..
T Consensus 301 a~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~-i-~~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 301 AAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE-I-SAERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE-E-ECCSSEEEEEECTTSCEEEEEEG
T ss_pred EEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee-e-eccccccCceECCCCCEEEEEeC
Confidence 5678888888888888888999999876432111111 1 22346788999999964 56654
No 128
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.68 E-value=3.4e-06 Score=73.60 Aligned_cols=186 Identities=11% Similarity=0.093 Sum_probs=111.9
Q ss_pred cceEEEccCCCEE-EEe--cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEe
Q 022967 79 PEDVCVDRNGVLY-TAT--RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~--~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~ 152 (289)
.+.+++.|||++. +++ .++.|..++ .+++........+... +++|.+||+++++....++.+++ .++ ......
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee
Confidence 4568999999865 554 568888899 4555433333445566 99999999988776667788887 555 222111
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE-----EeeCCCCCcceEEEec
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-----ILLDSLFFANGVALSK 227 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-----~~~~~~~~p~gl~~~~ 227 (289)
. . ........+++.|||...++... .......++.++....... .+.........++|+|
T Consensus 215 ~-~-~~~~~v~~v~fspdg~~l~~~s~-------------d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 215 D-F-DKNWSLSKINFIADDTVLIAASL-------------KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp C-C-CTTEEEEEEEEEETTEEEEEEEE-------------SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred c-C-CCCCCEEEEEEcCCCCEEEEEec-------------CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 1 1 11124568899999987665321 0001123555554433322 1223344457889999
Q ss_pred CCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 228 DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 228 d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
|+++|..+ ...+.|..||....+. ...+...-......+++.+||++.++...
T Consensus 280 dg~~lasg-s~D~~V~iwd~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 280 KGELAVLA-SNDNSIALVKLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp TSCEEEEE-ETTSCEEEEETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred CCCceEEE-cCCCEEEEEECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 99966555 4568899999764321 12222222234567889999987776543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.68 E-value=4e-06 Score=74.49 Aligned_cols=174 Identities=10% Similarity=0.050 Sum_probs=109.6
Q ss_pred CCcceEEEccCCCEE-EEecC---CeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC---CceEEEe-CCC
Q 022967 77 NGPEDVCVDRNGVLY-TATRD---GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD---KGLLKVT-EEG 146 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~---g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~---~~i~~~~-~~g 146 (289)
....++++.|+|+.. ++..+ ..|+.++ .+|+...+....+... .+++.+||+ |+++... ..|+.++ .++
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 345678999988744 44443 4899999 5666655544444556 899999997 5544322 3488888 566
Q ss_pred -eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEE
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~ 224 (289)
...+... . .....+++.|||+ |+++... .....|+.+|.++++...+.........++
T Consensus 258 ~~~~l~~~-~----~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 317 (415)
T 2hqs_A 258 QIRQVTDG-R----SNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDAD 317 (415)
T ss_dssp CEEECCCC-S----SCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEE
T ss_pred CEEeCcCC-C----CcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeE
Confidence 5443221 1 2356789999997 6655421 122479999998777665544334456789
Q ss_pred EecCCCEEEEEeCC--CCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 225 LSKDEDYLVVCETF--KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 225 ~~~d~~~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
|+|||++|+++... ...|+++++++... ..+. .. .....++..++|+
T Consensus 318 ~spdG~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~-~~-~~~~~~~~spdg~ 366 (415)
T 2hqs_A 318 VSSDGKFMVMVSSNGGQQHIAKQDLATGGV---QVLS-ST-FLDETPSLAPNGT 366 (415)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTTCCE---EECC-CS-SSCEEEEECTTSS
T ss_pred ECCCCCEEEEEECcCCceEEEEEECCCCCE---EEec-CC-CCcCCeEEcCCCC
Confidence 99999988887653 35899999875432 1111 11 1344566666665
No 130
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.67 E-value=9e-06 Score=71.02 Aligned_cols=190 Identities=11% Similarity=0.069 Sum_probs=118.3
Q ss_pred cCCcceEEEccCCCEEEEe-c--C-------------CeEEEEe-cCC--ce-EEeeee------cCcCccCeEEc-C--
Q 022967 76 LNGPEDVCVDRNGVLYTAT-R--D-------------GWIKRLH-KNG--TW-ENWKLI------GGDTLLGITTT-Q-- 126 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~-~--~-------------g~i~~~~-~~g--~~-~~~~~~------~~~p~~gl~~d-~-- 126 (289)
+.....+.+|+.|+||+-+ . + -+|+.+| .++ ++ ..+... ...-. .+++| .
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~-di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFG-GFAVDVANP 164 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEE-EEEEEESCT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccc-eEEEecccC
Confidence 6677889999999999644 2 1 1578888 444 43 333221 12234 78888 2
Q ss_pred -----CCcEEEEeCC-CceEEEe-CCC--eEEEEec----------cCCccc---cCccceEEcCC----C-cEEEeeCC
Q 022967 127 -----ENEILVCDAD-KGLLKVT-EEG--VTVLASH----------VNGSRI---NLADDLIAATD----G-SIYFSVAS 179 (289)
Q Consensus 127 -----~g~l~v~~~~-~~i~~~~-~~g--~~~~~~~----------~~~~~~---~~~~~l~~~~d----G-~lyv~~~~ 179 (289)
++.+||+|.+ .+|+.+| .+| .+++... ..|..+ ....+|+.+|+ + .||+...+
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 4569999975 6799999 777 4444211 112222 25678999987 4 59998765
Q ss_pred CccCccccccccceecCCCEEEEEeCC-------CCeEEEeeCCCCCcc--eEEEecCCCEEEEEeCCCCeEEEEEecC-
Q 022967 180 TKFGLHNWGLDLLEAKPHGKLLKYDPS-------LNETSILLDSLFFAN--GVALSKDEDYLVVCETFKFRCLKYWLKG- 249 (289)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~g~i~~~~~~-------~~~~~~~~~~~~~p~--gl~~~~d~~~l~v~~~~~~~i~~~~~~~- 249 (289)
+ ..+|++..+ ...++.+.+...... ++++++..+.||+++...+.|.+++.++
T Consensus 245 s-----------------~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 307 (381)
T 3q6k_A 245 A-----------------IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKM 307 (381)
T ss_dssp C-----------------SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSC
T ss_pred C-----------------CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCC
Confidence 2 246665411 123444433322233 4567644456999999999999999775
Q ss_pred CC-Ccceeeeec-cCCCCCCceeeCCCCCEEEEEeC
Q 022967 250 ES-KEQTEIFVE-NLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 250 ~~-~~~~~~~~~-~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
+- ....+.+.. ..-.+|+++.+|.+|+||+-+..
T Consensus 308 ~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 308 PLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp SBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred ccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 21 123333332 22258999999999999998754
No 131
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.67 E-value=3.4e-07 Score=81.63 Aligned_cols=106 Identities=8% Similarity=-0.116 Sum_probs=70.0
Q ss_pred CCEEEEecC-----CeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeC----------CCceEEEe-CCC--e
Q 022967 88 GVLYTATRD-----GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA----------DKGLLKVT-EEG--V 147 (289)
Q Consensus 88 g~l~v~~~~-----g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~----------~~~i~~~~-~~g--~ 147 (289)
.++|+.+.. +.|.++| .+++.......+..| ++++++||+ |||++. .+.|..+| .++ +
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv 162 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPI 162 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEE
Confidence 368987742 6899999 455554433444455 899999985 999973 24588888 555 3
Q ss_pred EEEEeccCCc--cccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 148 TVLASHVNGS--RINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 148 ~~~~~~~~~~--~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
..+.-..... ....|.+++++||| ++|+++.. ..+.|..+|.++++..
T Consensus 163 ~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 163 ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEE
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEE
Confidence 3332110000 12468899999999 59998632 2367999999887654
No 132
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.67 E-value=3.2e-06 Score=77.73 Aligned_cols=178 Identities=15% Similarity=0.173 Sum_probs=113.3
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEecCCceEE-eeeecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC--eEEEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWEN-WKLIGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG--VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g--~~~~~ 151 (289)
....++++.++|+.. ++..++.|..++.+++... +........ ++++.++++++++... ..+..++.++ +..+.
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~ 464 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVW-GVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLT 464 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEc
Confidence 345678999988765 6668888999987665433 322233344 8999999876665433 4455566555 44432
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCE
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~ 231 (289)
.. ......+++.|||.+.++... .+.|..++.++.....+.......+.++|+||+++
T Consensus 465 ~~-----~~~v~~~~~spd~~~las~~~-----------------d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 465 GH-----SSSVRGVAFSPDGQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp CC-----SSCEEEEEECTTSCEEEEEET-----------------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CC-----CCCEEEEEEcCCCCEEEEEeC-----------------CCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCE
Confidence 21 124678999999987776432 36677788765444445444455678999999997
Q ss_pred EEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 232 LVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
|..+. ..+.|..||.++..+ ..+. ...+...++++.+||++.++..
T Consensus 523 l~s~~-~dg~v~lwd~~~~~~---~~~~-~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 523 IASAS-DDKTVKLWNRNGQLL---QTLT-GHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp EEEEE-TTSEEEEECTTSCEE---EEEE-CCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEEE-CcCEEEEEeCCCCEE---EEEc-CCCCCEEEEEEcCCCCEEEEEe
Confidence 66654 457888888654321 2222 2223456788888887666543
No 133
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.67 E-value=2.3e-06 Score=76.05 Aligned_cols=192 Identities=11% Similarity=0.062 Sum_probs=117.3
Q ss_pred CCCEEEEe-cCCeEEEEec--C-C--ceEEeee--------ecCcCccCeEEcCCCcEEEEeCC-------CceEEEe-C
Q 022967 87 NGVLYTAT-RDGWIKRLHK--N-G--TWENWKL--------IGGDTLLGITTTQENEILVCDAD-------KGLLKVT-E 144 (289)
Q Consensus 87 ~g~l~v~~-~~g~i~~~~~--~-g--~~~~~~~--------~~~~p~~gl~~d~~g~l~v~~~~-------~~i~~~~-~ 144 (289)
...||+.. ..++|+.+|. + . ++.+... ....|+ +++..++| +||+..+ .+++.+| .
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 34678766 7789999992 2 2 2222221 123688 89999999 9997543 3689999 4
Q ss_pred CC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccc-----cccceecCCCEEEEEeCCCCeEEEeeCC-
Q 022967 145 EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWG-----LDLLEAKPHGKLLKYDPSLNETSILLDS- 216 (289)
Q Consensus 145 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~-----~~~~~~~~~g~i~~~~~~~~~~~~~~~~- 216 (289)
++ +..+. ....+....+++.+.|++++.++.. |+.+... .+.++.....+|..||.++++......-
T Consensus 173 T~~v~~~~~--~~~~~~~~~Yd~~~~p~~~~mvsS~---wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 173 SFEPLGKWE--IDRGDQYLAYDFWWNLPNEVLVSSE---WAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp TCCEEEECC--SBCTTCCCCCCEEEETTTTEEEECB---CCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred CCeEEEEEc--cCCCCccccceEEECCCCCEEEEcc---CcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 44 33221 1222334567888999998666543 3322111 1111113457899999987654433221
Q ss_pred --CCCcceEEE--ecCCCEEEEEeC-----CCCeEEEEEecCCCCcceeee-------eccC----------CCCCCcee
Q 022967 217 --LFFANGVAL--SKDEDYLVVCET-----FKFRCLKYWLKGESKEQTEIF-------VENL----------PGGPDNIK 270 (289)
Q Consensus 217 --~~~p~gl~~--~~d~~~l~v~~~-----~~~~i~~~~~~~~~~~~~~~~-------~~~~----------~~~p~~i~ 270 (289)
...|..+.| +|+++++||+.. .++.|++|..++......+.. ...+ +..|.+|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 245777766 999999999987 778888777654322211110 0011 35688999
Q ss_pred eCCCC-CEEEEEeCcc
Q 022967 271 LAPDG-SFWIAILQVF 285 (289)
Q Consensus 271 ~d~~G-~lwv~~~~g~ 285 (289)
+..|| .|||+.+..+
T Consensus 328 lS~DGrfLYVSnrg~d 343 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIG 343 (462)
T ss_dssp ECTTSCEEEEEETTTT
T ss_pred ECCCCCEEEEEeCCCC
Confidence 99999 5799887644
No 134
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.66 E-value=7.9e-07 Score=81.63 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=90.2
Q ss_pred eeecCcCccCeEEcCCCc-EEEEeCC-CceEEEe-CC------C-e----EEEEeccCCccccCccceEEcCCCcEEEee
Q 022967 112 KLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-EE------G-V----TVLASHVNGSRINLADDLIAATDGSIYFSV 177 (289)
Q Consensus 112 ~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~~~~-~~------g-~----~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~ 177 (289)
...+..|+ |+.+++||+ +|+++.. ..+..++ .. | + .+......| ..|..+++++||++|++.
T Consensus 273 Ipvg~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---~gP~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 273 IPIANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---LGPLHTAFDGRGNAYTSL 348 (595)
T ss_dssp EEEESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---SCEEEEEECTTSEEEEEE
T ss_pred EecCCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---CCcceEEECCCCeEEEEE
Confidence 33456799 999999996 7777644 5677777 31 1 1 122222222 468999999999999986
Q ss_pred CCCccCccccccccceecCCCEEEEEeCCC----------CeEEEeeCCCCCc------ceEEEecCCCEEEEEeCCC-C
Q 022967 178 ASTKFGLHNWGLDLLEAKPHGKLLKYDPSL----------NETSILLDSLFFA------NGVALSKDEDYLVVCETFK-F 240 (289)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~----------~~~~~~~~~~~~p------~gl~~~~d~~~l~v~~~~~-~ 240 (289)
.- .+.|.++|.++ .++..-.+-...| .|+++++||++||+++... .
T Consensus 349 ~l-----------------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 349 FL-----------------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp TT-----------------TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred ec-----------------CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 43 34566666543 1221112222233 5677899999999999877 6
Q ss_pred eE-----------EEEEecCCCCcceeeeeccCCCCCCceeeCCCCCE
Q 022967 241 RC-----------LKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (289)
Q Consensus 241 ~i-----------~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 277 (289)
|+ ..||++++++.-...... ...|....++....|
T Consensus 412 r~~~~gp~~~~~~ql~dis~~~m~lv~d~p~--~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 412 RFLNVGPLKPENDQLIDISGDKMVLVHDGPT--FAEPHDAIAVHPSIL 457 (595)
T ss_dssp SSCCCCSSCCEEEEEEECSSSSCEEEEEEEE--SSCCCCEEEECTTTT
T ss_pred ccccCCCCCCCcceEEEcCCCcEEEEEEEcC--CCCCCceEEccHHHc
Confidence 66 889998766543222221 356888777765543
No 135
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.66 E-value=1.9e-05 Score=67.44 Aligned_cols=179 Identities=14% Similarity=0.109 Sum_probs=112.8
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEe-CCCceEEEe-CCC--eEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCD-ADKGLLKVT-EEG--VTVL 150 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g--~~~~ 150 (289)
....+++.++|+.. ++..++.|..++ .+++........ .... .+++.++|+++++. ....|..+| .++ +..+
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~-~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~ 202 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL-SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 202 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE-EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 45578999988866 666889999998 445433222222 3345 89999999866654 334567777 566 3333
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCCcceEEEecCC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALSKDE 229 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~p~gl~~~~d~ 229 (289)
.. . ......+++.|+|.+.++... .+.|..+|.++++...... .......++|+|++
T Consensus 203 ~~-h----~~~v~~l~~spd~~~l~s~s~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 203 EG-H----AMPIRSLTFSPDSQLLVTASD-----------------DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp CC-C----SSCCCEEEECTTSCEEEEECT-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred cc-c----CCceeEEEEcCCCCEEEEEcC-----------------CCeEEEEECCCcceeEEEcCCCCceEEEEECCCC
Confidence 11 1 124678999999987776432 3668888877665543333 33445789999999
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeC
Q 022967 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
+.|+.+ ...+.|..||+..... ...+. ........++...+|...++...
T Consensus 261 ~~l~s~-s~D~~v~iwd~~~~~~--~~~~~-~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 261 THFVSS-SSDKSVKVWDVGTRTC--VHTFF-DHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp SEEEEE-ETTSCEEEEETTTTEE--EEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CEEEEE-eCCCcEEEEeCCCCEE--EEEEc-CCCCcEEEEEECCCCCEEEEEeC
Confidence 966555 4568899998764321 12222 22234566888888876665543
No 136
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.65 E-value=3.1e-05 Score=66.11 Aligned_cols=179 Identities=15% Similarity=0.118 Sum_probs=111.4
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC-e-EE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG-V-TV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g-~-~~ 149 (289)
..-.++++.+++.+. .+..++.|..++ .+++.. .+........ .+++.++|+.+++... ..+..++ ..+ . ..
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCSEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE
Confidence 345567788877766 566889999999 455433 3333334455 8999999987766544 4466666 555 2 22
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcceEEEecC
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKD 228 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~gl~~~~d 228 (289)
+.. . ......+++.|+|++.++... .+.|..+|..+++......+ ......++|+|+
T Consensus 160 ~~~--~---~~~v~~~~~spdg~~lasg~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 217 (321)
T 3ow8_A 160 LDT--R---GKFILSIAYSPDGKYLASGAI-----------------DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 217 (321)
T ss_dssp EEC--S---SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCCCEEEECTT
T ss_pred ecC--C---CceEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCcEEEEEcccCCceeEEEEcCC
Confidence 211 1 124668999999986665432 46788889887765544443 334578999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
++.|..+ ...+.|..||+..... ...+ .........+++.++|.+.++..
T Consensus 218 ~~~l~s~-s~dg~i~iwd~~~~~~--~~~~-~~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 218 SQLLVTA-SDDGYIKIYDVQHANL--AGTL-SGHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp SCEEEEE-CTTSCEEEEETTTCCE--EEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEE-cCCCeEEEEECCCcce--eEEE-cCCCCceEEEEECCCCCEEEEEe
Confidence 9955544 5668899999764322 1112 12223345677777776655543
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.62 E-value=5.9e-06 Score=68.40 Aligned_cols=160 Identities=10% Similarity=0.048 Sum_probs=96.5
Q ss_pred cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CC-C-eEEEEeccCCccccCccceEEcCC
Q 022967 95 RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EE-G-VTVLASHVNGSRINLADDLIAATD 170 (289)
Q Consensus 95 ~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~-g-~~~~~~~~~~~~~~~~~~l~~~~d 170 (289)
.++.|+.++ .+++...+........ .+++.++|+.+++.....|+.++ .+ + ...+... .....+.++++.||
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spd 95 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTG---FATICNNDHGISPD 95 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCT---TCCCBCSCCEECTT
T ss_pred cceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccc---cccccccceEECCC
Confidence 456788888 4555555555455566 89999999866655456788888 66 6 5443221 11234678999999
Q ss_pred CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEE--ec
Q 022967 171 GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYW--LK 248 (289)
Q Consensus 171 G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~--~~ 248 (289)
|..++.... .......|+.++.+++....+... .....++|+||++.|+++......+..|+ ..
T Consensus 96 g~~l~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 96 GALYAISDK-------------VEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp SSEEEEEEC-------------TTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCEEEEEEe-------------CCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 974444321 001246899999877765554333 23677899999998886654445444444 43
Q ss_pred CCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 249 GESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 249 ~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
+... ..+. .....+..+..+++|.
T Consensus 162 ~~~~---~~~~-~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 162 SGVE---TRLT-HGEGRNDGPDYSPDGR 185 (297)
T ss_dssp TCCE---EECC-CSSSCEEEEEECTTSS
T ss_pred CCcc---eEcc-cCCCccccceECCCCC
Confidence 3221 1111 2223445567777775
No 138
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.60 E-value=3e-05 Score=65.41 Aligned_cols=180 Identities=16% Similarity=0.154 Sum_probs=110.6
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~ 149 (289)
....++++.++|++. ++..++.|..++ .+++........ .... .+++.++++++++... ..+..++ .++ +..
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT 102 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE
Confidence 456778999988865 666889999998 466654433322 3344 8999999886665433 4466667 555 333
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCCcceEEEecC
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALSKD 228 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~p~gl~~~~d 228 (289)
+... ......+.+.|++.+.++... .+.|..+|.++++...... .......++++++
T Consensus 103 ~~~~-----~~~v~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 103 LKGH-----SNYVFCCNFNPQSNLIVSGSF-----------------DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp EECC-----SSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EcCC-----CCCEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 3211 124567889999987665432 3678888887665443333 2334567899999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
++.++.+ ...+.|..||+..... ...+..........++++.+|.+.++..
T Consensus 161 ~~~l~~~-~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 161 GSLIVSS-SYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp SSEEEEE-ETTSCEEEEETTTCCE--EEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEE-eCCCcEEEEECCCCce--eeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 9966665 4457899998764321 1122211112234477777776555443
No 139
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.57 E-value=1.9e-05 Score=72.55 Aligned_cols=177 Identities=14% Similarity=0.152 Sum_probs=109.9
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEecCCceEEeee-ecCcCccCeEEcCCCcEEEEe-CCCceEEEeCCC--eEEEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWENWKL-IGGDTLLGITTTQENEILVCD-ADKGLLKVTEEG--VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~~~g--~~~~~ 151 (289)
....++++.++|... ++..++.|..++.+++...... ...... ++++.++|+++++. .+..+..++.++ ...+.
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~ 423 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 423 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEec
Confidence 345678899988766 6668888988887776433322 233445 89999999765554 334456666555 44432
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCE
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~ 231 (289)
.. . ....++++.||+.+.++... .+.|..++..+.....+.........++|+||++.
T Consensus 424 ~~-~----~~v~~~~~s~d~~~l~~~~~-----------------d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 424 GH-S----SSVWGVAFSPDDQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 481 (577)
T ss_dssp CC-S----SCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCE
T ss_pred CC-C----CCeEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 21 1 24568899999986665432 36677788765555555444455678999999996
Q ss_pred EEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 232 LVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
|..+ ...+.|..|+.++... ..+. ........+++.++|++.++.
T Consensus 482 las~-~~d~~i~iw~~~~~~~---~~~~-~h~~~v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 482 IASA-SDDKTVKLWNRNGQLL---QTLT-GHSSSVRGVAFSPDGQTIASA 526 (577)
T ss_dssp EEEE-ETTSEEEEEETTSCEE---EEEE-CCSSCEEEEEECTTSSCEEEE
T ss_pred EEEE-eCCCEEEEEcCCCCEE---EEEe-CCCCCEEEEEEcCCCCEEEEE
Confidence 6555 4557898888654321 1222 222334567777777654443
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.55 E-value=1.4e-06 Score=80.73 Aligned_cols=180 Identities=11% Similarity=0.025 Sum_probs=104.5
Q ss_pred cceEEEccCCCEEEEec---CC--eEEEEec--CCceEEeeeecCcCccCeEEcCCC--cEEEEeCCCceEEEe-CCC-e
Q 022967 79 PEDVCVDRNGVLYTATR---DG--WIKRLHK--NGTWENWKLIGGDTLLGITTTQEN--EILVCDADKGLLKVT-EEG-V 147 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~---~g--~i~~~~~--~g~~~~~~~~~~~p~~gl~~d~~g--~l~v~~~~~~i~~~~-~~g-~ 147 (289)
...+++.||..+|+++. +. +|+.++. +|....+....+ .. ..++.++| .+|++....++..++ .+| .
T Consensus 67 ~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~-~~-~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~ 144 (582)
T 3o4h_A 67 VLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKP-MR-ILSGVDTGEAVVFTGATEDRVALYALDGGGL 144 (582)
T ss_dssp ECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCS-BE-EEEEEECSSCEEEEEECSSCEEEEEEETTEE
T ss_pred cccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccCCCC-ce-eeeeCCCCCeEEEEecCCCCceEEEccCCcE
Confidence 34566667733444443 22 5666775 665443322111 11 23444444 466665555666677 666 5
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEec
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSK 227 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~ 227 (289)
+.+... . . .+++++|||+..++... .......|+.+|.++++.+.+.........++|+|
T Consensus 145 ~~l~~~-~-----~-~~~~~spDG~~la~~~~-------------~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~Sp 204 (582)
T 3o4h_A 145 RELARL-P-----G-FGFVSDIRGDLIAGLGF-------------FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISP 204 (582)
T ss_dssp EEEEEE-S-----S-CEEEEEEETTEEEEEEE-------------EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECT
T ss_pred EEeecC-C-----C-ceEEECCCCCEEEEEEE-------------cCCCCeEEEEEcCCCCCceEeecCCCccccceECC
Confidence 555432 1 1 68899999975553221 00112469999988888776655444557899999
Q ss_pred CCCEEEEEeCCC-CeEEEEEecCCCCcceeeeeccCCCCCCcee--------eCCCCCEEEEEeCc
Q 022967 228 DEDYLVVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIK--------LAPDGSFWIAILQV 284 (289)
Q Consensus 228 d~~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~--------~d~~G~lwv~~~~g 284 (289)
||+.|+.++... ..|+++|+++.... ........+.+++ .++||.+++.....
T Consensus 205 DG~~l~~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 205 GMKVTAGLETAREARLVTVDPRDGSVE----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp TSCEEEEEECSSCEEEEEECTTTCCEE----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred CCCEEEEccCCCeeEEEEEcCCCCcEE----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 999998665542 37999988764321 2222222334455 88888777766543
No 141
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=2.4e-05 Score=68.54 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=62.3
Q ss_pred eEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCC-EEEEEeCCCCeE
Q 022967 165 LIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED-YLVVCETFKFRC 242 (289)
Q Consensus 165 l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~-~l~v~~~~~~~i 242 (289)
+++++|| ++|++......+ ......+.|+.+|.++++..........|.++++++||+ .+|+++...+.|
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~--------~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAW--------KLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred EEECCCCCEEEEEeccCCcc--------cccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 7888886 688875310000 000123579999998877644434444799999999999 788887778999
Q ss_pred EEEEecCCCCcceeeeeccCCCCCCceee
Q 022967 243 LKYWLKGESKEQTEIFVENLPGGPDNIKL 271 (289)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 271 (289)
.+||..+.+... ... .....|.+|..
T Consensus 344 ~ViD~~t~~vv~--~i~-~vG~~P~~~~~ 369 (373)
T 2mad_H 344 HIYDAGAGDQDQ--STV-ELGSGPQVLSV 369 (373)
T ss_pred EEEECCCCCEEe--eec-CCCCCCcEEEE
Confidence 999987543321 111 23346777664
No 142
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.54 E-value=8.6e-06 Score=72.54 Aligned_cols=153 Identities=11% Similarity=0.013 Sum_probs=96.5
Q ss_pred CCcceEEEcc-CCCE-EEEecCCeEEEEec-CCceEEeee---ecCcCccCeEEcC-CCcEEEEeCC-CceEEEe-CCC-
Q 022967 77 NGPEDVCVDR-NGVL-YTATRDGWIKRLHK-NGTWENWKL---IGGDTLLGITTTQ-ENEILVCDAD-KGLLKVT-EEG- 146 (289)
Q Consensus 77 ~~p~~l~~d~-~g~l-~v~~~~g~i~~~~~-~g~~~~~~~---~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~-~~g- 146 (289)
..-.+|++.| ++++ .++..+|.|..|+. .++...... ..+... +|+|.+ +++++++... ..|..+| ..+
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNI 198 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCE
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCc
Confidence 3457899988 5554 47889999999983 343322221 223344 899985 6666665444 4466667 445
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEe
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALS 226 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~ 226 (289)
...+..... .......+++.++|.+.++... .+.|..+|.+++....+.........++|+
T Consensus 199 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~-----------------dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 199 LRVFASSDT--INIWFCSLDVSASSRMVVTGDN-----------------VGNVILLNMDGKELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp EEEEECCSS--CSCCCCCEEEETTTTEEEEECS-----------------SSBEEEEESSSCBCCCSBCCSSCEEEEEEC
T ss_pred eeEEeccCC--CCccEEEEEECCCCCEEEEEeC-----------------CCcEeeeccCcceeEEEecccceEEeeeec
Confidence 544433211 1123567899999987766432 467888888755443333333445788999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecC
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
|+++.++++....+.|..||+..
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETTT
T ss_pred CCCceEEEEecCcceeeEEeccc
Confidence 99887777666678888898764
No 143
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.54 E-value=2.2e-05 Score=68.26 Aligned_cols=185 Identities=10% Similarity=-0.016 Sum_probs=113.5
Q ss_pred CCcceEEEccCC-CEE-EEecCCeEEEEe-cCCceEEeee---ecCcCccCeEEcC-CCcEEEE-eCCCceEEEe-CCC-
Q 022967 77 NGPEDVCVDRNG-VLY-TATRDGWIKRLH-KNGTWENWKL---IGGDTLLGITTTQ-ENEILVC-DADKGLLKVT-EEG- 146 (289)
Q Consensus 77 ~~p~~l~~d~~g-~l~-v~~~~g~i~~~~-~~g~~~~~~~---~~~~p~~gl~~d~-~g~l~v~-~~~~~i~~~~-~~g- 146 (289)
....++++.++| +++ ++..+|.|..++ .+++...... ...... .+++.+ +++++++ .....+..++ .+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGSV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSCE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 456778999987 554 777889999999 3444433322 223344 889988 5555554 4434566667 434
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEe
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALS 226 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~ 226 (289)
...+..... .......+++.+++.+.++... .+.|..+|.++.....+.........++|+
T Consensus 153 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 153 IQVFAKTDS--WDYWYCCVDVSVSRQMLATGDS-----------------TGRLLLLGLDGHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEEEECCCC--SSCCEEEEEEETTTTEEEEEET-----------------TSEEEEEETTSCEEEEEECSSSCEEEEEEC
T ss_pred eEEEeccCC--CCCCeEEEEECCCCCEEEEECC-----------------CCCEEEEECCCCEEEEeccCCCcEEEEEEC
Confidence 444432111 1134678999999986665432 477888888655555555445567889999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCC-cceeeeeccCCCCCCceeeCC-CCCEEEEEe
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGESK-EQTEIFVENLPGGPDNIKLAP-DGSFWIAIL 282 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~p~~i~~d~-~G~lwv~~~ 282 (289)
|+++.++++....+.|..||+..... ....... ........+++++ +|.+.++..
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 99984455545668999999875321 1111111 2234556788888 886555443
No 144
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.52 E-value=3.3e-05 Score=66.36 Aligned_cols=175 Identities=11% Similarity=0.123 Sum_probs=108.0
Q ss_pred ceEEEccCCCEEEEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEEEec
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTVLASH 153 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~~~~ 153 (289)
.++.+.+++.++++..++.|..++ .+++... +....+... .+++.++++++++... ..+..+| .++ ...+...
T Consensus 147 ~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h 225 (340)
T 1got_B 147 SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM-SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225 (340)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred EEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC
Confidence 345666677788888889999998 4554332 222233445 8999999987776443 4566777 556 3333211
Q ss_pred cCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC---CCCcceEEEecCCC
Q 022967 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---LFFANGVALSKDED 230 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~---~~~p~gl~~~~d~~ 230 (289)
......+++.|+|.++++... .+.|..+|..+++....... ......++|+|+++
T Consensus 226 -----~~~v~~v~~~p~~~~l~s~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 226 -----ESDINAICFFPNGNAFATGSD-----------------DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp -----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred -----cCCEEEEEEcCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 124678999999987776432 36677888776554332221 12346789999999
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
.|..+ ...+.|..||...... ...+. ...+....+++.++|.+.++.
T Consensus 284 ~l~~g-~~d~~i~vwd~~~~~~--~~~~~-~h~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 284 LLLAG-YDDFNCNVWDALKADR--AGVLA-GHDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp EEEEE-ETTSEEEEEETTTCCE--EEEEE-CCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEE-CCCCeEEEEEcccCcE--eeEee-cCCCcEEEEEEcCCCCEEEEE
Confidence 66665 4568899998754321 12222 222345567888888654443
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.51 E-value=1.7e-05 Score=74.88 Aligned_cols=163 Identities=13% Similarity=0.111 Sum_probs=92.0
Q ss_pred CeEEEEec-CCceEEeeee---cCcCccCeEEcCCCc-EEEEeCCC-----ceEEEe-CCC--eEEEEeccCCccccCcc
Q 022967 97 GWIKRLHK-NGTWENWKLI---GGDTLLGITTTQENE-ILVCDADK-----GLLKVT-EEG--VTVLASHVNGSRINLAD 163 (289)
Q Consensus 97 g~i~~~~~-~g~~~~~~~~---~~~p~~gl~~d~~g~-l~v~~~~~-----~i~~~~-~~g--~~~~~~~~~~~~~~~~~ 163 (289)
..|+.++. +|+....... ...+. .+++.+||+ |+++.... .++.++ .+| .+.+.............
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLT-NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEE-EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEe-eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 56788884 4444333221 12234 788999997 66543222 578888 555 33333221111111236
Q ss_pred ceEEcC--CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcce-EEEecCCCEEEEEeCCCC
Q 022967 164 DLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANG-VALSKDEDYLVVCETFKF 240 (289)
Q Consensus 164 ~l~~~~--dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~g-l~~~~d~~~l~v~~~~~~ 240 (289)
++++.| ||+++++... .....||.++.+++....+..+...... ++|+||++.||++.....
T Consensus 314 ~~~~sp~~dg~~l~~~~~---------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRR---------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCEECTTCSSEEEEEECT---------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred CceeecCCCCEEEEEEcc---------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 789999 9975554321 1235799999776666655443333334 789999999998876644
Q ss_pred ----eEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEE
Q 022967 241 ----RCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA 280 (289)
Q Consensus 241 ----~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~ 280 (289)
.|++++.++.... .+. . ......+++..+|..++.
T Consensus 379 ~~~~~l~~~d~~~~~~~---~l~-~-~~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 379 PLERHFYCIDIKGGKTK---DLT-P-ESGMHRTQLSPDGSAIID 417 (706)
T ss_dssp TTCBEEEEEETTCCCCE---ESC-C-SSSEEEEEECTTSSEEEE
T ss_pred CceEEEEEEEcCCCCce---ecc-C-CCceEEEEECCCCCEEEE
Confidence 7888887654321 111 1 122344666677754443
No 146
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.50 E-value=3e-05 Score=67.70 Aligned_cols=188 Identities=10% Similarity=0.048 Sum_probs=116.8
Q ss_pred CCcceEEEc-cCCCEEEEecC---C---eEEEEec---------CCce-EEeee--ec---CcCccCeEEcCCCcEEEEe
Q 022967 77 NGPEDVCVD-RNGVLYTATRD---G---WIKRLHK---------NGTW-ENWKL--IG---GDTLLGITTTQENEILVCD 134 (289)
Q Consensus 77 ~~p~~l~~d-~~g~l~v~~~~---g---~i~~~~~---------~g~~-~~~~~--~~---~~p~~gl~~d~~g~l~v~~ 134 (289)
.-|.++++| .+|++|++... | .+-.++. ++.+ ..+.. .+ -.+. ++.+|+.|+|||.|
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~-~v~iD~~~rLWVLD 104 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIY-QPVIDDCRRLWVVD 104 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEE-EEEECTTCEEEEEE
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEee-EEEEcCCCcEEEEe
Confidence 358889995 79999998733 2 3555552 2244 44432 12 2345 88899999999998
Q ss_pred CCC----------------ceEEEe--CC--C-eEEEEec-cCCccccCccceEEc-C-------CCcEEEeeCCCccCc
Q 022967 135 ADK----------------GLLKVT--EE--G-VTVLASH-VNGSRINLADDLIAA-T-------DGSIYFSVASTKFGL 184 (289)
Q Consensus 135 ~~~----------------~i~~~~--~~--g-~~~~~~~-~~~~~~~~~~~l~~~-~-------dG~lyv~~~~~~~~~ 184 (289)
.+. .|+.+| .+ . ++.+.-. ..-.+....++|++| . ++.+|++|..
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~----- 179 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL----- 179 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT-----
T ss_pred CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC-----
Confidence 651 267788 34 4 4444221 111122457789999 2 4679999964
Q ss_pred cccccccceecCCCEEEEEeCCCCeEEEeeC--------------C-----CCCcceEEEecC----CCEEEEEeCCCCe
Q 022967 185 HNWGLDLLEAKPHGKLLKYDPSLNETSILLD--------------S-----LFFANGVALSKD----EDYLVVCETFKFR 241 (289)
Q Consensus 185 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--------------~-----~~~p~gl~~~~d----~~~l~v~~~~~~~ 241 (289)
..+|+.||..+++.-.+.. + .....||+++|+ +++||+.-..+.+
T Consensus 180 ------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 180 ------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp ------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred ------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 2567777776665433321 1 135578899998 8999999999889
Q ss_pred EEEEEec---CCCC-cceeeeeccCCCCCC--ceeeC-CCCCEEEEEeC
Q 022967 242 CLKYWLK---GESK-EQTEIFVENLPGGPD--NIKLA-PDGSFWIAILQ 283 (289)
Q Consensus 242 i~~~~~~---~~~~-~~~~~~~~~~~~~p~--~i~~d-~~G~lwv~~~~ 283 (289)
++++..+ ...+ ...+.+.+..+ ..+ ++++| ++|+||++...
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~kg~-~s~~~~~~~D~~~G~ly~~~~~ 295 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGNRGK-YNDAIALAYDPKTKVIFFAEAN 295 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEECCT-TCCEEEEEECTTTCEEEEEESS
T ss_pred EEEEEHHHhhCcchhhceEEeeecCC-CCCcceEEEeCCCCeEEEEecc
Confidence 9998742 2222 22233322211 123 46776 88999998753
No 147
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.50 E-value=3.4e-06 Score=77.45 Aligned_cols=191 Identities=10% Similarity=0.105 Sum_probs=113.1
Q ss_pred CC-CEEEEe-cCCeEEEEec-CCceEEeeee--cCcCccCeEEc--CCC-cEEEEeC-----------------C-CceE
Q 022967 87 NG-VLYTAT-RDGWIKRLHK-NGTWENWKLI--GGDTLLGITTT--QEN-EILVCDA-----------------D-KGLL 140 (289)
Q Consensus 87 ~g-~l~v~~-~~g~i~~~~~-~g~~~~~~~~--~~~p~~gl~~d--~~g-~l~v~~~-----------------~-~~i~ 140 (289)
|| .+|+.+ .+++|.++|. +.+...+... ...|+ |+++. +++ .+|++.. + +.+-
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 44 578766 5789999994 4454443332 34588 99983 555 5777741 1 1244
Q ss_pred EEe-CCCeEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCcc---------ccc--------cccc-ee--cCCC
Q 022967 141 KVT-EEGVTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLH---------NWG--------LDLL-EA--KPHG 198 (289)
Q Consensus 141 ~~~-~~g~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~---------~~~--------~~~~-~~--~~~g 198 (289)
.+| +.. ++......+ ..|.++++++||. +|++...+.-+.. ++. .... .+ ...+
T Consensus 179 vID~~t~-~v~~qI~Vg---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKW-EVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTT-EEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCC-eEEEEEEeC---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 455 333 111111111 1478999999985 7777654322100 110 0000 00 0114
Q ss_pred EEEEEeCCC--CeE-EEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC------CCcce-eeee-ccCCCCCC
Q 022967 199 KLLKYDPSL--NET-SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE------SKEQT-EIFV-ENLPGGPD 267 (289)
Q Consensus 199 ~i~~~~~~~--~~~-~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~------~~~~~-~~~~-~~~~~~p~ 267 (289)
.|-.+|..+ ++. .....-...|.|+.++|||+++|+++....+|.+||.+.. ++... .... ......|.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 588899876 332 2233334689999999999999999999999999998732 11111 1111 13335799
Q ss_pred ceeeCCCCCEEEEEe
Q 022967 268 NIKLAPDGSFWIAIL 282 (289)
Q Consensus 268 ~i~~d~~G~lwv~~~ 282 (289)
.+++|.+|++|++..
T Consensus 335 h~aF~~dG~aY~t~~ 349 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLF 349 (595)
T ss_dssp EEEECTTSEEEEEET
T ss_pred eEEECCCCeEEEEEe
Confidence 999999999898864
No 148
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.49 E-value=3.6e-05 Score=66.21 Aligned_cols=185 Identities=10% Similarity=-0.055 Sum_probs=107.6
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEe---eeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--e
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENW---KLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--V 147 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~---~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~ 147 (289)
....++++.++|++. ++..++.|..++ .+++.... ........ .+++.++++++++ .....+..++ ..+ .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 345678999988765 666889999998 45543222 12223345 8999988875554 4434455555 333 2
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCC------------------CCe
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS------------------LNE 209 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~------------------~~~ 209 (289)
...... ..........+++.++|.++++... .+.|..+|.. .++
T Consensus 132 ~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 132 WVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSC-----------------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEEE-CTTCCSCEEEEEECTTSSEEEEEET-----------------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred eeeeee-ecccCCCeeEEEEcCCCCEEEEEcC-----------------CCCEEEEEcccccccccccccccccccchhh
Confidence 222111 1111235678999999976665432 3566677732 233
Q ss_pred E-EEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 210 T-SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 210 ~-~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
. ..+.........++++|+++.|+.+. ..+.|..||+..... ...+. ........++...+|.+.++..++
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~d~ 265 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKMA--VATLA-SETLPLLAVTFITESSLVAAGHDC 265 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTTE--EEEEE-CSSCCEEEEEEEETTEEEEEETTS
T ss_pred heEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCce--eEEEc-cCCCCeEEEEEecCCCEEEEEeCC
Confidence 3 23333334567899999999776664 558899999864322 12221 112234567777777766655443
No 149
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.48 E-value=3.3e-05 Score=68.51 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=97.4
Q ss_pred CeEEEEecCC-ceEEeeeecCcCccCeEEcCCCc-EEEEeCC---CceEEEe-CCC-eEEEEeccCCccccCccceEEcC
Q 022967 97 GWIKRLHKNG-TWENWKLIGGDTLLGITTTQENE-ILVCDAD---KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAAT 169 (289)
Q Consensus 97 g~i~~~~~~g-~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~---~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~ 169 (289)
+.|+.++.+| ....+........ .+++.++|+ |+++... ..|+.++ .+| ...+... . .....+++.|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcC
Confidence 6788888655 3444444444556 899999997 4444433 2588888 666 5444321 1 2456889999
Q ss_pred CCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCC--CCeEEEEE
Q 022967 170 DGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF--KFRCLKYW 246 (289)
Q Consensus 170 dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~--~~~i~~~~ 246 (289)
||+ |+++... .....|+.+|.++++...+.........++|+||++.|+++... ..+|++++
T Consensus 233 dg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 233 DGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp TSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 997 6655422 12356999999888776665444456778999999988877542 34789888
Q ss_pred ecCCCCcceeeeeccCCCCCCceeeCCCCCE
Q 022967 247 LKGESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 277 (289)
+++.... .+. ........++...+|..
T Consensus 298 ~~~~~~~---~l~-~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 298 INGGAPQ---RIT-WEGSQNQDADVSSDGKF 324 (415)
T ss_dssp TTSSCCE---ECC-CSSSEEEEEEECTTSSE
T ss_pred CCCCCEE---EEe-cCCCcccCeEECCCCCE
Confidence 7754321 111 11123344666777753
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.48 E-value=9.8e-05 Score=63.11 Aligned_cols=183 Identities=15% Similarity=0.145 Sum_probs=106.8
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCcEEEEe-CCCceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g--~~~ 149 (289)
....++++.++|++. ++..+|.|..++ .+++...... ...... .+++.++++++++. ....|..++ .++ ...
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW-SIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 456789999988765 667889999998 5565433322 333445 89999988766554 434577777 556 333
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe------------EEEee--C
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE------------TSILL--D 215 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~------------~~~~~--~ 215 (289)
+. .. ..+..+++.++|..+++.... .....+.|..+|...+. ...+. .
T Consensus 112 ~~--~~----~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 112 WK--SP----VPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp EE--CS----SCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred ee--cC----CCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 32 11 246789999999766554320 00011445555533221 11111 1
Q ss_pred CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 216 SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 216 ~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
+......++++++++.|+++. ..+.|..||+.... .....+. ........+++..+|.+.++.
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNY-EYVDSID-LHEKSISDMQFSPDLTYFITS 236 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTT-EEEEEEE-CCSSCEEEEEECTTSSEEEEE
T ss_pred CccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCc-EeEEEEe-cCCCceeEEEECCCCCEEEEe
Confidence 122567789999999777764 45889999986421 1111121 222345667888888654444
No 151
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.48 E-value=4e-05 Score=67.22 Aligned_cols=157 Identities=13% Similarity=0.044 Sum_probs=100.0
Q ss_pred CCcceEEEccCC-CEE-EEecCCeEEEEe-cCCceEEee--e-ecCcCccCeEEcCCCcEEE-EeCCCceEEEe-CCC--
Q 022967 77 NGPEDVCVDRNG-VLY-TATRDGWIKRLH-KNGTWENWK--L-IGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-- 146 (289)
Q Consensus 77 ~~p~~l~~d~~g-~l~-v~~~~g~i~~~~-~~g~~~~~~--~-~~~~p~~gl~~d~~g~l~v-~~~~~~i~~~~-~~g-- 146 (289)
....++++.++| +++ ++..++.|..++ .+++..... . ...... .+++.++|.+++ +..+..+..+| .++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 445678999986 454 667889999999 455433222 2 223345 899998887555 44445577777 556
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE--EEe-eCCCCCcceE
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET--SIL-LDSLFFANGV 223 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~--~~~-~~~~~~p~gl 223 (289)
+..+..... ...+..+++.++|.++++... ....+.|..+|..+++. ... .........+
T Consensus 211 ~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 211 VAEKDRPHE---GTRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EEEEECSSC---SSSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred eeeeccCCC---CCcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 333312111 123568899999987665410 00246788888765432 122 2334456788
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEecCCC
Q 022967 224 ALSKDEDYLVVCETFKFRCLKYWLKGES 251 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~~~~i~~~~~~~~~ 251 (289)
+++++++.|+++....+.|..|++....
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 9999999998887777899999987643
No 152
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.46 E-value=6.7e-05 Score=65.78 Aligned_cols=180 Identities=11% Similarity=0.006 Sum_probs=108.2
Q ss_pred CcceEEEcc-CCCEE-EEecCCeEEEEe-cCCc--------eEEeeeecCcCccCeEEcCCC-cEEEE-eCCCceEEEe-
Q 022967 78 GPEDVCVDR-NGVLY-TATRDGWIKRLH-KNGT--------WENWKLIGGDTLLGITTTQEN-EILVC-DADKGLLKVT- 143 (289)
Q Consensus 78 ~p~~l~~d~-~g~l~-v~~~~g~i~~~~-~~g~--------~~~~~~~~~~p~~gl~~d~~g-~l~v~-~~~~~i~~~~- 143 (289)
...++++.+ +++++ ++..+|.|..++ .++. ...+........ .+++.+++ +++++ ..+..|..+|
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEEET
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 456789988 77766 666889999998 3432 222332334445 89999987 55554 4445577778
Q ss_pred CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCC--C
Q 022967 144 EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSL--F 218 (289)
Q Consensus 144 ~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~--~ 218 (289)
.++ ...+.... .......+++.++|.++++... .+.|..+|.++++..... ... .
T Consensus 162 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~ 221 (402)
T 2aq5_A 162 GTGAAVLTLGPDV---HPDTIYSVDWSRDGALICTSCR-----------------DKRVRVIEPRKGTVVAEKDRPHEGT 221 (402)
T ss_dssp TTTEEEEEECTTT---CCSCEEEEEECTTSSCEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCSS
T ss_pred CCCCccEEEecCC---CCCceEEEEECCCCCEEEEEec-----------------CCcEEEEeCCCCceeeeeccCCCCC
Confidence 566 33331010 1124678999999975555322 478899998877654433 222 2
Q ss_pred CcceEEEecCCCEEEEEe--CCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEE
Q 022967 219 FANGVALSKDEDYLVVCE--TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWI 279 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv 279 (289)
.+..++|+++++.|+++. ...+.|..||+............ ........++.+.+|.+.+
T Consensus 222 ~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 222 RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL-DTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC-CCCSSCEEEEEETTTTEEE
T ss_pred cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec-cCCCceeEEEEcCCCCEEE
Confidence 357889999988555542 45678999998653221111111 1123355677777776543
No 153
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.46 E-value=1.6e-06 Score=69.51 Aligned_cols=156 Identities=13% Similarity=0.037 Sum_probs=95.4
Q ss_pred cceeEeccCCcCCcceEEEccCCCEEEEecCCeEEEEec-CCc-------eEEeeeec-CcCccCeEEcCCCcEEEEeCC
Q 022967 66 QSVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHK-NGT-------WENWKLIG-GDTLLGITTTQENEILVCDAD 136 (289)
Q Consensus 66 ~~~~~~~~~~~~~p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~-------~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~ 136 (289)
.++.++..+.+....+++++|+|.||+. .+|.+++.++ ++. .+.+.... ..=. .+.||++|.||++..
T Consensus 30 ~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~-a~~fD~~G~LYav~d- 106 (236)
T 1tl2_A 30 ARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQ-FLFFDPNGYLYAVSK- 106 (236)
T ss_dssp HHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCS-EEEECTTSCEEEEET-
T ss_pred hhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccce-EEEECCCCCEEEeCC-
Confidence 4567777755778889999999999966 8889999984 422 12221111 1113 688999999999954
Q ss_pred CceEEEe-C-CC-eEEEEe--ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCC-CC--
Q 022967 137 KGLLKVT-E-EG-VTVLAS--HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LN-- 208 (289)
Q Consensus 137 ~~i~~~~-~-~g-~~~~~~--~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~-- 208 (289)
..|+|++ + ++ -..+.. .+..........|.++|+|.||..+ . +.+++-.+- +.
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-d------------------g~lyr~~~P~~~~~ 167 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-G------------------QQFYKALPPVSNQD 167 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-T------------------TEEEEECCCSSTTC
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-C------------------CcEEecCCCCCCCc
Confidence 6699998 3 33 211111 1111122334688999999999886 3 455553322 11
Q ss_pred ----eEEEee-CCCCCcceEEEecCCCEEEEEeCCCCeEEEEE
Q 022967 209 ----ETSILL-DSLFFANGVALSKDEDYLVVCETFKFRCLKYW 246 (289)
Q Consensus 209 ----~~~~~~-~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~ 246 (289)
..+.+. .+...-.-+.+++++. ||.++ +.++++..
T Consensus 168 ~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 168 NWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKFYEDY 207 (236)
T ss_dssp CHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEEEEES
T ss_pred ccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeEEecC
Confidence 112222 2322233366888887 77776 57888763
No 154
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.44 E-value=1.5e-05 Score=69.93 Aligned_cols=173 Identities=14% Similarity=0.073 Sum_probs=99.4
Q ss_pred EEEEecCCeEEEEe-c-CCceEEee----eecCcCc-cCeEEc-CCCcEEEEeCCCceEEEe-CCC-eEEEEecc-----
Q 022967 90 LYTATRDGWIKRLH-K-NGTWENWK----LIGGDTL-LGITTT-QENEILVCDADKGLLKVT-EEG-VTVLASHV----- 154 (289)
Q Consensus 90 l~v~~~~g~i~~~~-~-~g~~~~~~----~~~~~p~-~gl~~d-~~g~l~v~~~~~~i~~~~-~~g-~~~~~~~~----- 154 (289)
++..+.+|++..++ . +|+..... .....+. ...+++ ++|++|+...+..++.+| .++ .+++....
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~ 271 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA 271 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHH
T ss_pred eEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccc
Confidence 33555777777776 2 25442111 1112233 024554 678765554456688888 434 44332111
Q ss_pred ---CCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCC
Q 022967 155 ---NGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED 230 (289)
Q Consensus 155 ---~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~ 230 (289)
.+..-.....+++++++ ++|++......+. ...+...|+.+|.++++......-...+.++++++|++
T Consensus 272 ~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~--------hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~ 343 (386)
T 3sjl_D 272 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR--------HKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEK 343 (386)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC--------TTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSS
T ss_pred cccccccCCCcceeeECCCCCeEEEEeccccccc--------cCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCC
Confidence 11111223357888876 7999753100000 00123579999999887665444335688999999997
Q ss_pred -EEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCC
Q 022967 231 -YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPD 274 (289)
Q Consensus 231 -~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 274 (289)
.||+++...+.|.+||....+.. . -+ ..++.|..|.+..|
T Consensus 344 ~~ly~tn~~~~~VsViD~~t~k~~--~-~i-~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 344 PLLYALSTGDKTLYIHDAESGEEL--R-SV-NQLGHGPQVITTAD 384 (386)
T ss_dssp CEEEEEETTTTEEEEEETTTCCEE--E-EE-CCCCSSCCEEEECC
T ss_pred eEEEEEcCCCCeEEEEECCCCcEE--E-Ee-cCCCCCceeEECCc
Confidence 89999988899999997643321 1 12 34467888877655
No 155
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.43 E-value=7.9e-05 Score=64.15 Aligned_cols=182 Identities=11% Similarity=0.099 Sum_probs=102.1
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEec-CCceE-E--eeeecCcCccCeEEcCCCcEEEEeC-CCceEEEe-CCC-eEEE
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLHK-NGTWE-N--WKLIGGDTLLGITTTQENEILVCDA-DKGLLKVT-EEG-VTVL 150 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~~-~g~~~-~--~~~~~~~p~~gl~~d~~g~l~v~~~-~~~i~~~~-~~g-~~~~ 150 (289)
-..+++.|+|.+. ++..++.|..++. ++... . .......+++.+++.++|+++++.. +..+..++ ..+ .+.+
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECV 98 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEE
Confidence 4578999988866 5668899999983 44322 1 1111222333899999998666543 34455555 334 3322
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe-E---EEeeCCCCCcceEEEe
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-T---SILLDSLFFANGVALS 226 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~-~---~~~~~~~~~p~gl~~~ 226 (289)
.. ..+. ......+++.|+|++.++... .+.|..+|.+++. . ..+.........++|+
T Consensus 99 ~~-~~~h-~~~v~~v~~sp~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 99 TT-LEGH-ENEVKSVAWAPSGNLLATCSR-----------------DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp EE-ECCC-SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred EE-ccCC-CCCceEEEEeCCCCEEEEEEC-----------------CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 11 1111 124678999999987766432 3455555544332 1 1222233445778999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
|+++.|..+ ...+.|..|+...........+ .........++++++|++.++.
T Consensus 160 p~~~~l~s~-s~d~~i~~w~~~~~~~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 160 PSQELLASA-SYDDTVKLYREEEDDWVCCATL-EGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp SSSSCEEEE-ETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEE-eCCCcEEEEEecCCCEEEEEEe-cCCCCceEEEEECCCCCEEEEE
Confidence 999966555 4557888888765321111111 1222334557777777655543
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.43 E-value=3.1e-05 Score=73.17 Aligned_cols=171 Identities=11% Similarity=0.027 Sum_probs=101.1
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CC-----C-eE
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EE-----G-VT 148 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~-----g-~~ 148 (289)
..+.++++.+++.+.++ .++.|+.++ .+++...+........ .+++.+||+..+......|+.++ .+ | ..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE
Confidence 45778999999555554 458899999 4555555444444566 89999999744443446688888 66 6 44
Q ss_pred EEEeccCC----------ccccCccceEEcCCCc-EEEeeCCCccCccccc----------------cccceecCCCEEE
Q 022967 149 VLASHVNG----------SRINLADDLIAATDGS-IYFSVASTKFGLHNWG----------------LDLLEAKPHGKLL 201 (289)
Q Consensus 149 ~~~~~~~~----------~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~----------------~~~~~~~~~g~i~ 201 (289)
.+...... ..+..+.++.++|||+ |+++.... -+..... ...-.......|+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ-SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC-TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 33221111 0111257899999996 55443100 0000000 0000011335799
Q ss_pred EEeCCCCeEEEeeCC---CCCcceEEEecCCCEEEEEeCCC----CeEEEEEecCC
Q 022967 202 KYDPSLNETSILLDS---LFFANGVALSKDEDYLVVCETFK----FRCLKYWLKGE 250 (289)
Q Consensus 202 ~~~~~~~~~~~~~~~---~~~p~gl~~~~d~~~l~v~~~~~----~~i~~~~~~~~ 250 (289)
.+|.++++...+... ......++|+||++.|+++.... ..|+.+|+.+.
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 999988876655422 23356789999999888865432 37888887653
No 157
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.42 E-value=8.3e-05 Score=63.88 Aligned_cols=150 Identities=7% Similarity=-0.020 Sum_probs=90.3
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCc---eEEeeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC-eEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT---WENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG-VTV 149 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~---~~~~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g-~~~ 149 (289)
.-.++++.++|++. ++..++.|..++ .+++ ...+........ .+++.++++++++ .....+..++ .++ ...
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 35678999988866 666889999998 4453 223332333445 8999998876655 4334566677 555 322
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe----EEEeeC-CCCCcceEE
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE----TSILLD-SLFFANGVA 224 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~~~~-~~~~p~gl~ 224 (289)
...... ....+..+++.++|.++++... .+.|..+|.+.+. ...+.. .......++
T Consensus 89 ~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 89 TLVILR--INRAARCVRWAPNEKKFAVGSG-----------------SRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EEECCC--CSSCEEEEEECTTSSEEEEEET-----------------TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred eEEeec--CCCceeEEEECCCCCEEEEEeC-----------------CCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 211111 1134678999999975554322 2444444433332 222222 234567899
Q ss_pred EecCCCEEEEEeCCCCeEEEEEec
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
|+|+++.++.+. ..+.|..||+.
T Consensus 150 ~~~~~~~l~~~~-~dg~i~~~d~~ 172 (372)
T 1k8k_C 150 WHPNSVLLAAGS-CDFKCRIFSAY 172 (372)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEECC
T ss_pred EcCCCCEEEEEc-CCCCEEEEEcc
Confidence 999999666664 45789999864
No 158
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.42 E-value=2.4e-05 Score=68.17 Aligned_cols=89 Identities=11% Similarity=0.108 Sum_probs=54.7
Q ss_pred CCEEEEe------cCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeC----------CCceEEEe-CCC--
Q 022967 88 GVLYTAT------RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA----------DKGLLKVT-EEG-- 146 (289)
Q Consensus 88 g~l~v~~------~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~----------~~~i~~~~-~~g-- 146 (289)
..+|+.+ .++.|+++| .+++..........| ++++++||+ +|+++. .+.|..+| ..+
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~ 93 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF 93 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE
Confidence 3577665 256899999 566654333323334 799999985 888863 12378888 555
Q ss_pred eEEEEecc-CCccccCccceEEcCCC-cEEEeeC
Q 022967 147 VTVLASHV-NGSRINLADDLIAATDG-SIYFSVA 178 (289)
Q Consensus 147 ~~~~~~~~-~~~~~~~~~~l~~~~dG-~lyv~~~ 178 (289)
...+.... .......|.+++++||| .||+++.
T Consensus 94 ~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 94 EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred EEEEEcCccccccCCCcceEEECCCCCEEEEECC
Confidence 33332110 00012468899999999 5888763
No 159
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.40 E-value=4.8e-05 Score=66.45 Aligned_cols=184 Identities=10% Similarity=0.041 Sum_probs=109.4
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEecCCceEEeee-ecCcCccCeEEcCCCcEE-EEeCCCceEEEe-CCC--eEEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWENWKL-IGGDTLLGITTTQENEIL-VCDADKGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~l~-v~~~~~~i~~~~-~~g--~~~~~ 151 (289)
...++++.++|.+. ++..+|.|..++.+++...... ...... .+++.++++.+ .+.....+..++ .++ ...+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 45678999988765 6778899999996665443333 233445 89999888744 455445677777 556 33322
Q ss_pred eccCCc----------cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCc
Q 022967 152 SHVNGS----------RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFA 220 (289)
Q Consensus 152 ~~~~~~----------~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p 220 (289)
...... .......+.+.+++.++++.. .+.|..+|..+++..... ......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------------------KGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEECG------------------GGCEEEEETTCSSCSEEECCCSSCE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------------------CCeEEEEEcCCCceeeeeccCCCce
Confidence 111000 001166788888887666542 367888888765433222 233345
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 221 ~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
..++++++++.|+.+. ..+.|..|++..... ...+. ........+....+|.++.+..++
T Consensus 251 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~~l~~~~~d~ 310 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNS--QNCFY-GHSQSIVSASWVGDDKVISCSMDG 310 (425)
T ss_dssp EEEEEETTTTEEEEEE-TTSCEEEECSSSBSC--SEEEC-CCSSCEEEEEEETTTEEEEEETTS
T ss_pred EEEEECCCCCEEEEEc-CCCEEEEEECCCCcc--ceEec-CCCccEEEEEECCCCEEEEEeCCC
Confidence 7789999999666664 457899998764322 11221 222344567777777444444433
No 160
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.40 E-value=9.8e-06 Score=70.38 Aligned_cols=153 Identities=17% Similarity=0.056 Sum_probs=92.0
Q ss_pred cceEEEccCCCEEEEe-c------CCeEEEEe-cCCceE-----EeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-C
Q 022967 79 PEDVCVDRNGVLYTAT-R------DGWIKRLH-KNGTWE-----NWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-E 144 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~-~------~g~i~~~~-~~g~~~-----~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~ 144 (289)
-.++++.|||++.++. . ++.|+.++ .++... .......... .++|.+++.++++.....|..++ .
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~dg~v~lWd~~ 123 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASDSGAVELWEIL 123 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEETTSCEEEC---
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEECCCEEEEeecc
Confidence 4678999999988544 3 56777776 344211 1112223344 88999999888877655565556 4
Q ss_pred CC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcc
Q 022967 145 EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFAN 221 (289)
Q Consensus 145 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~ 221 (289)
++ .........+ -......+++.|+|+..++... .+.|..+|..+++......+ ....+
T Consensus 124 ~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 124 EKESLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGGK-----------------DFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp -----CCCCEEECC-CSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred ccceeEEEeeccCC-CCCCEEEEEECCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 44 1111000011 0124678999999987766432 36688888887765544333 34557
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
.++++++++.++++....+.|..||+...
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~ 214 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKP 214 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSS
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCC
Confidence 78999988766666666788999987643
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.40 E-value=1.2e-05 Score=76.32 Aligned_cols=170 Identities=12% Similarity=0.034 Sum_probs=96.7
Q ss_pred cceEEEccCCCEEEEecCCeEEEEe-cCC---ceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEe
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNG---TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~-~~g---~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~ 152 (289)
..++++.|||+..+...++.|+.++ .++ ....+........ .+++.+||+..+......|+.++ .+| ...+..
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 4678999999855333348899999 445 4444433334455 89999999844433345788898 556 443322
Q ss_pred ccCCc------------cccCccceEEcCCCc-EEEeeCCC-ccCcc-------------ccc-cccceecCCCEEEEEe
Q 022967 153 HVNGS------------RINLADDLIAATDGS-IYFSVAST-KFGLH-------------NWG-LDLLEAKPHGKLLKYD 204 (289)
Q Consensus 153 ~~~~~------------~~~~~~~l~~~~dG~-lyv~~~~~-~~~~~-------------~~~-~~~~~~~~~g~i~~~~ 204 (289)
..... .+..+.+++++|||+ |+++.... ..... ... ...-+......|+.+|
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 11100 011247899999996 66653210 00000 000 0000001122788889
Q ss_pred CCC-CeEEEeeC---CCCCcceEEEecCCCEEEEEeC----CCCeEEEEEecCC
Q 022967 205 PSL-NETSILLD---SLFFANGVALSKDEDYLVVCET----FKFRCLKYWLKGE 250 (289)
Q Consensus 205 ~~~-~~~~~~~~---~~~~p~gl~~~~d~~~l~v~~~----~~~~i~~~~~~~~ 250 (289)
.++ ++...+.. .......++| |||++|+++.. ....|+++|+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence 887 76655432 2234567899 99998887653 2356888887654
No 162
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.40 E-value=4.9e-05 Score=64.99 Aligned_cols=181 Identities=15% Similarity=0.015 Sum_probs=107.5
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCC------CceEEEe-CCC-
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDAD------KGLLKVT-EEG- 146 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~------~~i~~~~-~~g- 146 (289)
....++++.+++++. ++..+|.|..++ .+++............ .+++.+++..+++... ..+..++ ..+
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 345678999888765 666889999999 5565443333334455 8999999876655332 3455555 222
Q ss_pred -eEEEEecc--------CCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC-CeEEE-eeC
Q 022967 147 -VTVLASHV--------NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NETSI-LLD 215 (289)
Q Consensus 147 -~~~~~~~~--------~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~~~~~-~~~ 215 (289)
...+.... ..........+++.++|.+.++.. ..+.|..+|..+ ++... +..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-----------------KDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-----------------TTSEEEEEETTTTTEEEEEEEC
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-----------------CCCEEEEEECCCCcEeEEEEec
Confidence 11111100 000111566888999987555432 247888999876 34333 333
Q ss_pred CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEE
Q 022967 216 SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA 280 (289)
Q Consensus 216 ~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~ 280 (289)
.......++|+|+++.|+.+. ..+.|..||+..... ...+. .......+++..+|.+.+.
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTLQV--LKKYE--TDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCE--EEEEE--CSSCEEEEEECSSSSEEEE
T ss_pred CCCceeEEEECCCCCEEEEec-CCceEEEEECCCCce--eeeec--CCCCceeEEecCCCceEEE
Confidence 344567899999999777664 458899999865322 11121 2233456777777755443
No 163
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.38 E-value=3.2e-05 Score=67.35 Aligned_cols=168 Identities=12% Similarity=0.068 Sum_probs=97.7
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeecC---c--------CccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEe
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGG---D--------TLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~---~--------p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~ 152 (289)
++.+|++..++.|+.++ .+|+......... . ......+ .++.+|++....+++.++ .+| ......
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~~~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFALAYNGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEEEecCcEEEEEECCCCcEEeecc
Confidence 67889988889999999 5776543222110 0 1102233 367899988667899999 677 433221
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEEEecCCC
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVALSKDED 230 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~~~~d~~ 230 (289)
.. ...++.++ ++++|+++.. +.|+.+|+++++..-..... .......+ .++
T Consensus 267 -~~-----~~~~~~~~-~~~l~~~~~~------------------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~ 319 (376)
T 3q7m_A 267 -LG-----SVNDFIVD-GNRIYLVDQN------------------DRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNG 319 (376)
T ss_dssp -CC-----CEEEEEEE-TTEEEEEETT------------------CCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETT
T ss_pred -CC-----CCCCceEE-CCEEEEEcCC------------------CeEEEEECCCCcEEEeecccCCCcccCCEE--ECC
Confidence 11 22344444 7789998643 67999999888764333311 12222333 245
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
.||+.+. .+.|+.+|..+.+........ . ........+ .+|++|+++.+|.+
T Consensus 320 ~l~v~~~-~g~l~~~d~~tG~~~~~~~~~-~-~~~~~~~~~-~~~~l~v~~~~G~l 371 (376)
T 3q7m_A 320 NLVVGDS-EGYLHWINVEDGRFVAQQKVD-S-SGFQTEPVA-ADGKLLIQAKDGTV 371 (376)
T ss_dssp EEEEECT-TSEEEEEETTTCCEEEEEECC-T-TCBCSCCEE-ETTEEEEEBTTSCE
T ss_pred EEEEEeC-CCeEEEEECCCCcEEEEEecC-C-CcceeCCEE-ECCEEEEEeCCCEE
Confidence 6898854 578999997654332211110 1 111122233 46899999988765
No 164
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.38 E-value=0.00028 Score=61.86 Aligned_cols=179 Identities=8% Similarity=-0.021 Sum_probs=107.2
Q ss_pred eEEEccCCCEEEEecCCeEEEEecC--Cc-eEEeeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEEEEec
Q 022967 81 DVCVDRNGVLYTATRDGWIKRLHKN--GT-WENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTVLASH 153 (289)
Q Consensus 81 ~l~~d~~g~l~v~~~~g~i~~~~~~--g~-~~~~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~~~~~ 153 (289)
++.++ ...++++..+|.|..++.. +. ...+....+... ++++.+++.++++ .....+..+| .++ ...+..
T Consensus 181 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~- 257 (401)
T 4aez_A 181 CLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC-GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN- 257 (401)
T ss_dssp EEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-
T ss_pred EEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee-EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-
Confidence 34443 2234466677888888832 22 223333334455 8999998876555 4445577777 555 332211
Q ss_pred cCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEE
Q 022967 154 VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYL 232 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l 232 (289)
. ......+++.|+| .++++... ...+.|..+|..+++.............++|+++++.+
T Consensus 258 ~----~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l 318 (401)
T 4aez_A 258 H----NAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEI 318 (401)
T ss_dssp C----SSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEE
T ss_pred C----cceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeE
Confidence 1 1346789999977 56665421 02467888998777655444444567889999999977
Q ss_pred EEEe-CCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 233 VVCE-TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 233 ~v~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
+++. ...+.|..|++..........+. ...+....++...+|.+.++..
T Consensus 319 ~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 319 MSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp EEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEEEC
T ss_pred EEEeecCCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEEEe
Confidence 7763 35688999998754322221121 2224456678888887555443
No 165
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.37 E-value=4.1e-05 Score=66.19 Aligned_cols=149 Identities=9% Similarity=0.046 Sum_probs=95.4
Q ss_pred cceEEEccCCCEEEEecCCeEEEEe-cCCceE-Eee----eecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eE
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWE-NWK----LIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VT 148 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~-~~~----~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~ 148 (289)
-.++++.+++.|.++..+|.|..|+ .+++.. ... ...+... .++|.++|+++++... ..|..+| .++ +.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~-~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVS-TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4568888898888999999999998 445322 111 1123344 8999999987665433 4577777 666 33
Q ss_pred EEEeccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee---CCCCCcceEE
Q 022967 149 VLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL---DSLFFANGVA 224 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~---~~~~~p~gl~ 224 (289)
.+... ......+++.+++ .++++... .+.|..+|..+++..... ........++
T Consensus 164 ~~~~h-----~~~V~~~~~~~~~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 164 SYRAH-----AAQVTCVAASPHKDSVFLSCSE-----------------DNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp EECCC-----SSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred EEcCc-----CCceEEEEecCCCCCceeeecc-----------------ccccccccccccceeeeeecceeeccceeee
Confidence 33211 1246688999987 46665432 366778887766543321 1223457789
Q ss_pred EecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
++|++..++++....+.|..||+...
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC-
T ss_pred ecCCCCcceEEeccCCcEEEEECCCC
Confidence 99976657776666788999998653
No 166
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.37 E-value=6.7e-05 Score=67.01 Aligned_cols=138 Identities=12% Similarity=0.102 Sum_probs=80.8
Q ss_pred CeEEcCCCcEE-EEeCC-CceEEEe-C--CC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccce
Q 022967 121 GITTTQENEIL-VCDAD-KGLLKVT-E--EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLE 193 (289)
Q Consensus 121 gl~~d~~g~l~-v~~~~-~~i~~~~-~--~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~ 193 (289)
.+++.++|..+ ++... ..+..++ . ++ ...+..... ...+..+++.|+|...++..
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~--------------- 168 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---SKRPNAISIAEDDTTVIIAD--------------- 168 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---SSCEEEEEECTTSSEEEEEE---------------
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---CCCceEEEEcCCCCEEEEEe---------------
Confidence 78899999764 54433 4455556 4 55 444432111 12467899999996544432
Q ss_pred ecCCCEEEEEeCCCCeEE-----EeeCCCCCcceEEEecC---CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCC
Q 022967 194 AKPHGKLLKYDPSLNETS-----ILLDSLFFANGVALSKD---EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGG 265 (289)
Q Consensus 194 ~~~~g~i~~~~~~~~~~~-----~~~~~~~~p~gl~~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (289)
..+.++.++..+++.. .+.........++|+|+ ++.|+.+. ..+.|..||+..... ...+.....+.
T Consensus 169 --~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~d~~i~vwd~~~~~~--~~~~~~~h~~~ 243 (450)
T 2vdu_B 169 --KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD-RDEHIKISHYPQCFI--VDKWLFGHKHF 243 (450)
T ss_dssp --TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE-TTSCEEEEEESCTTC--EEEECCCCSSC
T ss_pred --CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc-CCCcEEEEECCCCce--eeeeecCCCCc
Confidence 1367888887654432 12222344577899999 77666554 458899999875432 22222222344
Q ss_pred CCceeeCCCCCEEEEEe
Q 022967 266 PDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 266 p~~i~~d~~G~lwv~~~ 282 (289)
...+++. +|.+.++..
T Consensus 244 v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAG 259 (450)
T ss_dssp EEEEEEC-STTEEEEEE
T ss_pred eEEEEEC-CCCEEEEEe
Confidence 5678888 776555443
No 167
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.0001 Score=65.82 Aligned_cols=180 Identities=10% Similarity=0.096 Sum_probs=110.8
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-----EeeeecCcCccCeEEcCC---CcEEE-EeCCCceEEEe-C
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-----NWKLIGGDTLLGITTTQE---NEILV-CDADKGLLKVT-E 144 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-----~~~~~~~~p~~gl~~d~~---g~l~v-~~~~~~i~~~~-~ 144 (289)
..+.++++.++|... +++.+|.|+.++ .++... .+........ .+++.++ +.+++ +..+..|..++ .
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT-DVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE-EEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceE-EEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 446789999988654 777889999998 344322 2222233445 8899988 76555 44445677777 5
Q ss_pred CC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-------
Q 022967 145 EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD------- 215 (289)
Q Consensus 145 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~------- 215 (289)
++ +..+.... ...+..+++. +|.++++... .+.|..+|..+++......
T Consensus 229 ~~~~~~~~~~~h----~~~v~~~~~s-d~~~l~s~~~-----------------d~~v~vwd~~~~~~~~~~~~~~~~~~ 286 (450)
T 2vdu_B 229 QCFIVDKWLFGH----KHFVSSICCG-KDYLLLSAGG-----------------DDKIFAWDWKTGKNLSTFDYNSLIKP 286 (450)
T ss_dssp CTTCEEEECCCC----SSCEEEEEEC-STTEEEEEES-----------------SSEEEEEETTTCCEEEEEECHHHHGG
T ss_pred CCceeeeeecCC----CCceEEEEEC-CCCEEEEEeC-----------------CCeEEEEECCCCcEeeeecchhhhhh
Confidence 55 33322111 1246788999 8876665432 4678888887665432211
Q ss_pred -------------------CCCCcceEEEecCCCEEEEEeCCCCeEEEEEe--cCC-CCcceeeeeccCCCCCCceeeCC
Q 022967 216 -------------------SLFFANGVALSKDEDYLVVCETFKFRCLKYWL--KGE-SKEQTEIFVENLPGGPDNIKLAP 273 (289)
Q Consensus 216 -------------------~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~--~~~-~~~~~~~~~~~~~~~p~~i~~d~ 273 (289)
.......++++++++.++++....+.|..|++ ... .+.....+. ..+.+.+++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~--~~~~v~~~~~~~ 364 (450)
T 2vdu_B 287 YLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT--FPYNVISLSAHN 364 (450)
T ss_dssp GCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE--CSSCEEEEEEET
T ss_pred hhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec--cCCceEEEEecC
Confidence 11234578999999999998767789999998 321 222222221 124566777777
Q ss_pred CCCEEEEEe
Q 022967 274 DGSFWIAIL 282 (289)
Q Consensus 274 ~G~lwv~~~ 282 (289)
+.+|++..
T Consensus 365 -~~~~v~~~ 372 (450)
T 2vdu_B 365 -DEFQVTLD 372 (450)
T ss_dssp -TEEEEEEC
T ss_pred -CcEEEEEe
Confidence 45666654
No 168
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.35 E-value=2.3e-05 Score=74.45 Aligned_cols=138 Identities=12% Similarity=0.012 Sum_probs=86.5
Q ss_pred CCcceEEEccCCC-EEEEec-CC-----eEEEEe-cCCceEEeeeecC-------------------------cCccCeE
Q 022967 77 NGPEDVCVDRNGV-LYTATR-DG-----WIKRLH-KNGTWENWKLIGG-------------------------DTLLGIT 123 (289)
Q Consensus 77 ~~p~~l~~d~~g~-l~v~~~-~g-----~i~~~~-~~g~~~~~~~~~~-------------------------~p~~gl~ 123 (289)
..+.++++.+||+ |+++.. ++ .|+.++ .+|+......... ... .++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeE
Confidence 4577889999997 455554 66 799999 4566544433211 135 899
Q ss_pred EcCCCcEEEEeCCCceEEEe-CCCe--EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCE
Q 022967 124 TTQENEILVCDADKGLLKVT-EEGV--TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGK 199 (289)
Q Consensus 124 ~d~~g~l~v~~~~~~i~~~~-~~g~--~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~ 199 (289)
+.+||+..+......|+.++ .++. +.. ..... ......++++|||+ |+++. .+.
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~--~l~~~-~~~~~~~~~SPDG~~la~~~-------------------~~~ 173 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVR--QLTHG-EGFATDAKLSPKGGFVSFIR-------------------GRN 173 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCC--BCCCS-SSCEEEEEECTTSSEEEEEE-------------------TTE
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEE--EcccC-CcccccccCCCCCCEEEEEe-------------------CCc
Confidence 99999744433336688888 3331 110 00100 12456889999997 55442 146
Q ss_pred EEEEeCCCCeEEEeeCCCCC-----------------cceEEEecCCCEEEEEeC
Q 022967 200 LLKYDPSLNETSILLDSLFF-----------------ANGVALSKDEDYLVVCET 237 (289)
Q Consensus 200 i~~~~~~~~~~~~~~~~~~~-----------------p~gl~~~~d~~~l~v~~~ 237 (289)
|+.+|.++++...+...... +.+++|+|||++|+++..
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 99999887776655332221 477999999998888743
No 169
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.35 E-value=1.5e-05 Score=68.92 Aligned_cols=176 Identities=9% Similarity=-0.020 Sum_probs=103.4
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCC-cEEEE-eCCCceEEEe-CCC--eEEE
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQEN-EILVC-DADKGLLKVT-EEG--VTVL 150 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g-~l~v~-~~~~~i~~~~-~~g--~~~~ 150 (289)
-.++++.++|++. .+..++.|..++ .+++...... ...... .+++.+++ .++++ ..++.|..+| ..+ ...+
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT-CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE-EEEecCCCCCceeeeccccccccccccccceeeee
Confidence 4568899988866 666889999999 4565433222 233445 88898877 46655 3335577777 555 3332
Q ss_pred EeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE-EeeCCCCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILLDSLFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~~~~~p~gl~~~~d 228 (289)
..... ......+++.|+ ++++++.. ..+.|..+|.++++.. .+.......+.++|+|+
T Consensus 209 ~~~~~---~~~~~~~~~~p~~~~~l~sg~-----------------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~ 268 (344)
T 4gqb_B 209 GCSAP---GYLPTSLAWHPQQSEVFVFGD-----------------ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPH 268 (344)
T ss_dssp C-------CCCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEESCC--CCEEEECCSSCEEEEEECSS
T ss_pred eccee---eccceeeeecCCCCcceEEec-----------------cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 21111 124567888885 46665532 2467888888766533 33333444578999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEE
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWI 279 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv 279 (289)
+..++++-...+.|..||.....+. .+ ....+...++++..+|. +.+
T Consensus 269 g~~~lasgs~D~~i~vwd~~~~~~~---~~-~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 269 SVPFLASLSEDCSLAVLDSSLSELF---RS-QAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp SSCCEEEEETTSCEEEECTTCCEEE---EE-CCCSSCEEEEEECSSSTTEEE
T ss_pred CCeEEEEEeCCCeEEEEECCCCcEE---EE-cCCCCCEEEEEEeCCCCeEEE
Confidence 8656666566688999987643221 11 12223445677766663 443
No 170
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.34 E-value=0.00015 Score=63.55 Aligned_cols=180 Identities=11% Similarity=0.005 Sum_probs=106.8
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeee-ec-----------------C-cCccCeEEcCCCcEEEEeCC-
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKL-IG-----------------G-DTLLGITTTQENEILVCDAD- 136 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~-~~-----------------~-~p~~gl~~d~~g~l~v~~~~- 136 (289)
...++++.++|++++...++.+..++ .+|+...... .. . ... .++|.++|+++++...
T Consensus 66 ~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~~d 144 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGAED 144 (393)
T ss_dssp CCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEcCC
Confidence 45678999999987555567788887 5565432211 00 0 123 7889999986665433
Q ss_pred CceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee
Q 022967 137 KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214 (289)
Q Consensus 137 ~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 214 (289)
..|..++ .++ ........ ......+++.|+|...++... .+.|..+|..+++.....
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~-----------------d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGH----EQDIYSLDYFPSGDKLVSGSG-----------------DRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp SCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCcEEEEEccC----CCCEEEEEEcCCCCEEEEecC-----------------CCcEEEEECCCCeeEEEE
Confidence 4566677 555 32221111 124678999999976665432 467888888877655444
Q ss_pred CCCCCcceEEEec-CCCEEEEEeCCCCeEEEEEecCCCCcceeeee------ccCCCCCCceeeCCCCCEEEEEe
Q 022967 215 DSLFFANGVALSK-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFV------ENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 215 ~~~~~p~gl~~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
........++++| +++.+..+ ...+.|..||....... ..+. .........+++..+|.+.++..
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~~~--~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETGFLV--ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEE-ETTSCEEEEETTTCCEE--EEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEE-cCCCcEEEEECCCCcEE--EeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 4344567788998 77755544 55688999987643221 1110 01112344577777776555443
No 171
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.34 E-value=0.00017 Score=61.80 Aligned_cols=182 Identities=12% Similarity=0.048 Sum_probs=108.1
Q ss_pred cCCcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC---e
Q 022967 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG---V 147 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g---~ 147 (289)
...-.++++.++|++. .+..+|.|..++ .+++.. .+........ .+++.++|+++++... ..+..++ ..+ .
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM-TCAYAPSGNYVACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTCSBSC
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE-EEEECCCCCEEEEEeCCCeEEEEECccCCCcc
Confidence 3456778999988866 667899999999 455433 2322233345 8899999986665433 3455555 322 2
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCCcceEEEe
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALS 226 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~p~gl~~~ 226 (289)
..... ..+. ......+.+.+++.++.+.. .+.|..+|..+++...... .......++++
T Consensus 134 ~~~~~-~~~h-~~~v~~~~~~~~~~l~s~s~------------------d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 134 RVSRE-LAGH-TGYLSCCRFLDDNQIVTSSG------------------DTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp EEEEE-EECC-SSCEEEEEEEETTEEEEEET------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred eeEEE-ecCC-CccEEEEEECCCCcEEEEEC------------------CCcEEEEECCCCcEEEEEcCCCCceEEEEEC
Confidence 22211 1111 12345677777887655532 3668888887776544333 23345788999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
|+++.+ ++....+.|..||+..... ...+. ........+++.++|+++++..
T Consensus 194 ~~~~~l-~sg~~d~~v~~wd~~~~~~--~~~~~-~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 194 PDTRLF-VSGACDASAKLWDVREGMC--RQTFT-GHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp TTSSEE-EEEETTSCEEEEETTTCSE--EEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEE-EEEeCCCcEEEEECCCCee--EEEEc-CCcCCEEEEEEcCCCCEEEEEc
Confidence 999844 4445568899999764321 11221 2223455677888887655544
No 172
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.34 E-value=6.5e-05 Score=65.92 Aligned_cols=176 Identities=11% Similarity=0.088 Sum_probs=102.8
Q ss_pred EEccCCCEE-EEecCCeEEEEec-CCceEEee-eecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEEEEeccC
Q 022967 83 CVDRNGVLY-TATRDGWIKRLHK-NGTWENWK-LIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTVLASHVN 155 (289)
Q Consensus 83 ~~d~~g~l~-v~~~~g~i~~~~~-~g~~~~~~-~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~~~~~~~ 155 (289)
++.++|+++ ++..+|.|..++. .++..... ....... .+++.++++++++ .....+..++ .++ ...+...
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-- 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-- 180 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC--
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC--
Confidence 456677765 6678899999983 44443332 2223344 8999999875555 4334577777 555 4444211
Q ss_pred CccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-------------------
Q 022967 156 GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS------------------- 216 (289)
Q Consensus 156 ~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~------------------- 216 (289)
......+++.|+|.+.++... .+.|..+|..+++.......
T Consensus 181 ---~~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 181 ---RATVTDIAIIDRGRNVLSASL-----------------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDR 240 (420)
T ss_dssp ---SSCEEEEEEETTTTEEEEEET-----------------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCS
T ss_pred ---CCcEEEEEEcCCCCEEEEEcC-----------------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcc
Confidence 124678999999986665432 35677777766654332221
Q ss_pred ------CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-E-EEEEeCc
Q 022967 217 ------LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-F-WIAILQV 284 (289)
Q Consensus 217 ------~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l-wv~~~~g 284 (289)
......++|+|+++.|+.+. ..+.|..||+..... ...+..........++..++|. + +.+..++
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred eeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEeCCC
Confidence 12234567789998766664 457899999764321 1122212223455677888776 4 4444444
No 173
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.33 E-value=3.9e-05 Score=66.78 Aligned_cols=169 Identities=11% Similarity=0.096 Sum_probs=95.2
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEeccCCcc--ccC
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLASHVNGSR--INL 161 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~~~~~~~--~~~ 161 (289)
++.+|+++.++.|+.++ .+|+................+ .++.+|+.....+++.+| .+| ....... .... ...
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEEC-CC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCceeecC
Confidence 78999999899999999 568765332322222313344 367899987667799999 678 4332221 1111 111
Q ss_pred ccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCc-------------ceEEEecC
Q 022967 162 ADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA-------------NGVALSKD 228 (289)
Q Consensus 162 ~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p-------------~gl~~~~d 228 (289)
....+++ +|.+|++.. .+.|+.+|+++|+..-.... ..| ....+ .
T Consensus 181 ~~~~~~~-~~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~--~ 238 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVGGD------------------NGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV--V 238 (376)
T ss_dssp CCCCEEE-TTEEEECCT------------------TTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEE--E
T ss_pred CCCcEEE-CCEEEEEcC------------------CCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEE--E
Confidence 1223333 678888743 36799999887765432111 011 11122 2
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
++.+|++. ..+.|+.+|..+.+..... .. +....+.++ ++++|+++..+++
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~~~w~~----~~-~~~~~~~~~-~~~l~~~~~~g~l 289 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQIMWKR----EL-GSVNDFIVD-GNRIYLVDQNDRV 289 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCCEEEEE----CC-CCEEEEEEE-TTEEEEEETTCCE
T ss_pred CCEEEEEe-cCcEEEEEECCCCcEEeec----cC-CCCCCceEE-CCEEEEEcCCCeE
Confidence 45688874 4578999987543221111 11 123345555 5688888876554
No 174
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.32 E-value=0.00018 Score=62.98 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=91.2
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC-eEEEEe
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g-~~~~~~ 152 (289)
..++++.++|++. ++..++.|..++ .+++...... ...... .+++.++|..+++... ..+..+| .++ ......
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 3478899988766 667889999999 4454433222 223345 8999998876665433 4466667 566 322211
Q ss_pred ccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee--------CCCCCcceE
Q 022967 153 HVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--------DSLFFANGV 223 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--------~~~~~p~gl 223 (289)
. . .....+++.| +|.++++... .+.|..+|..+++..... ........+
T Consensus 205 ~-~----~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 205 I-E----DGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp C-S----SCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred c-C----CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 1 1 2356788888 7876665432 356777887766543222 112334678
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 224 ALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+|+|+++.|+.+ ...+.|..||+..
T Consensus 263 ~~~~~g~~l~s~-s~d~~v~~wd~~~ 287 (393)
T 1erj_A 263 VFTRDGQSVVSG-SLDRSVKLWNLQN 287 (393)
T ss_dssp EECTTSSEEEEE-ETTSEEEEEEC--
T ss_pred EECCCCCEEEEE-eCCCEEEEEECCC
Confidence 999999966555 4568899998764
No 175
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.31 E-value=4.7e-05 Score=66.26 Aligned_cols=152 Identities=16% Similarity=0.169 Sum_probs=94.3
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeee--ecC-cCccCeEEcCCCcEEEEeC-CC--c--eEEEe-CCC-
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKL--IGG-DTLLGITTTQENEILVCDA-DK--G--LLKVT-EEG- 146 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~--~~~-~p~~gl~~d~~g~l~v~~~-~~--~--i~~~~-~~g- 146 (289)
...++++.|+|.+.+...++.+.+++ .+++...... ... ... .++|.++|..+++.. .. + ++.++ ..+
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLS-KINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEE-EEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred ceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEE-EEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 35779999999988666667788887 5555332211 112 234 788999997666532 22 2 44455 333
Q ss_pred eEEEE-eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE-eeCC-CCCcceE
Q 022967 147 VTVLA-SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLDS-LFFANGV 223 (289)
Q Consensus 147 ~~~~~-~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~-~~~~-~~~p~gl 223 (289)
..... ....+ .......+++.|||++.++... .+.|..+|.++++... +..+ ......+
T Consensus 257 ~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~-----------------D~~V~iwd~~~~~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 257 TSVLRSKQVTN-RFKGITSMDVDMKGELAVLASN-----------------DNSIALVKLKDLSMSKIFKQAHSFAITEV 318 (365)
T ss_dssp EEEEEEEEEES-SCSCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTTTEEEEEETTSSSSCEEEE
T ss_pred ecceeeeeecC-CCCCeEeEEECCCCCceEEEcC-----------------CCEEEEEECCCCcEEEEecCcccCCEEEE
Confidence 22211 11111 1234678999999987665432 3678888988776543 3333 3445789
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 224 ALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+|+||+++ +++-...+.|.+|++..
T Consensus 319 ~fSpdg~~-laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 319 TISPDSTY-VASVSAANTIHIIKLPL 343 (365)
T ss_dssp EECTTSCE-EEEEETTSEEEEEECCT
T ss_pred EECCCCCE-EEEEeCCCeEEEEEcCC
Confidence 99999994 55556779999999864
No 176
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.31 E-value=0.00046 Score=59.12 Aligned_cols=184 Identities=10% Similarity=0.083 Sum_probs=103.6
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEE-eCCCceEEEeCCC-eEEEEe
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVC-DADKGLLKVTEEG-VTVLAS 152 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~~~g-~~~~~~ 152 (289)
.-.++++.+++.+. .+..++.|..++ .+++.. .+........ .+++.++|+.+++ .....+..++-.+ ......
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSSA 156 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEECC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeeee
Confidence 35678888888765 666889999999 456543 3333334455 8999999876554 4434566666323 211111
Q ss_pred ccCCccccCccceEEcCCC----------cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcce
Q 022967 153 HVNGSRINLADDLIAATDG----------SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANG 222 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG----------~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~g 222 (289)
... ........+++.|++ .++++.. ..+.|..+|........+.........
T Consensus 157 ~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 157 EKE-NHSDWVSCVRYSPIMKSANKVQPFAPYFASVG-----------------WDGRLKVWNTNFQIRYTFKAHESNVNH 218 (343)
T ss_dssp TTT-SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-----------------TTSEEEEEETTTEEEEEEECCSSCEEE
T ss_pred ccc-CCCceeeeeeeccccccccccCCCCCEEEEEc-----------------CCCEEEEEcCCCceeEEEcCccccceE
Confidence 100 111234567777765 3333322 246777788543323333333445678
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 223 VALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 223 l~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
++|+|++++|..+ ...+.|..||+...... ...+. .......+++.+++.+..+...+
T Consensus 219 ~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~~-~~~~~--~~~~v~~v~~sp~~~~la~~~d~ 276 (343)
T 2xzm_R 219 LSISPNGKYIATG-GKDKKLLIWDILNLTYP-QREFD--AGSTINQIAFNPKLQWVAVGTDQ 276 (343)
T ss_dssp EEECTTSSEEEEE-ETTCEEEEEESSCCSSC-SEEEE--CSSCEEEEEECSSSCEEEEEESS
T ss_pred EEECCCCCEEEEE-cCCCeEEEEECCCCccc-ceeec--CCCcEEEEEECCCCCEEEEECCC
Confidence 9999999966555 45688999998432211 11111 11234567777777665544443
No 177
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.31 E-value=8.4e-06 Score=71.31 Aligned_cols=94 Identities=11% Similarity=0.067 Sum_probs=63.1
Q ss_pred eEEcCCC-cEEEeeC---CCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeC-CC
Q 022967 165 LIAATDG-SIYFSVA---STKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET-FK 239 (289)
Q Consensus 165 l~~~~dG-~lyv~~~---~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~-~~ 239 (289)
+++++|| ++|++.. .... .. .+.+..+|.++++..........|.+|++++|++++|++.. ..
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~---------~~---~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCL---------AA---AENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTT---------SC---EEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTT
T ss_pred eEEcCCCCEEEEEeccccCccc---------cc---CCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCC
Confidence 7899987 6998742 1000 00 13466899987765443333346999999999998999888 68
Q ss_pred CeEEEEEecCCCCcceeeeeccCCCCCCceeeCCC
Q 022967 240 FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPD 274 (289)
Q Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 274 (289)
+.|.++|....+.. . .+ .....|.+|++..+
T Consensus 337 ~~VsVID~~t~kvv--~-~I-~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 337 EVLDIYDAASDQDQ--S-SV-ELDKGPESLSVQNE 367 (368)
T ss_dssp TEEEEEESSSCEEE--E-EC-CCCSCCCEEECCCC
T ss_pred CeEEEEECCCCcEE--E-EE-ECCCCCCEEEeecC
Confidence 99999998754321 1 12 23467999988754
No 178
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.30 E-value=3.6e-05 Score=67.82 Aligned_cols=181 Identities=13% Similarity=0.134 Sum_probs=106.0
Q ss_pred CcceEEEcc--CCCEEEEecCC----eEEEEecCC-ceEEeeeecC--------------cCccCeEEcC---CCcEEEE
Q 022967 78 GPEDVCVDR--NGVLYTATRDG----WIKRLHKNG-TWENWKLIGG--------------DTLLGITTTQ---ENEILVC 133 (289)
Q Consensus 78 ~p~~l~~d~--~g~l~v~~~~g----~i~~~~~~g-~~~~~~~~~~--------------~p~~gl~~d~---~g~l~v~ 133 (289)
...+|++|+ .+.||++...| .|++.+..| .++.+..... ... .|++++ .+.||++
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEEEEE
Confidence 457799998 78999888766 788876444 3444332110 122 577874 5789998
Q ss_pred eCCCceEEEeCCC--eEEEEecc--C------------CccccCccceEEcC--CCcEEEeeCCCccCccccccccceec
Q 022967 134 DADKGLLKVTEEG--VTVLASHV--N------------GSRINLADDLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAK 195 (289)
Q Consensus 134 ~~~~~i~~~~~~g--~~~~~~~~--~------------~~~~~~~~~l~~~~--dG~lyv~~~~~~~~~~~~~~~~~~~~ 195 (289)
....+|++.++.| .+.+.... + +........|++++ ++.||++...
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~---------------- 198 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS---------------- 198 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET----------------
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC----------------
Confidence 7667899988655 55442210 1 01112345788987 3679998532
Q ss_pred CCCEEEEEeCCCCeEEEeeCCC-------------CCcceEEEecC-CCEEEEEeCCCCeEEEEEecCCCCcceeeeecc
Q 022967 196 PHGKLLKYDPSLNETSILLDSL-------------FFANGVALSKD-EDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN 261 (289)
Q Consensus 196 ~~g~i~~~~~~~~~~~~~~~~~-------------~~p~gl~~~~d-~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 261 (289)
+.|++.+-.+...+.+..+. .....|+++++ .+.||++.. ..|++.+-.+.+.... ...
T Consensus 199 --ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl~~s~D~G~tW~~~---~~~ 271 (394)
T 3b7f_A 199 --GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGIYRMDRREGVWKRI---GDA 271 (394)
T ss_dssp --BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEEEEEETTTTEEECG---GGG
T ss_pred --CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--CeEEEeCCCCCcceEC---CCC
Confidence 56888865555566553321 12346778875 467898853 6788776444322211 111
Q ss_pred CCC----CCCceeeC--CCCCEEEEEe
Q 022967 262 LPG----GPDNIKLA--PDGSFWIAIL 282 (289)
Q Consensus 262 ~~~----~p~~i~~d--~~G~lwv~~~ 282 (289)
++. +...|++| ..+.+|+++.
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCCCccceEEEEECCCCCCEEEEEec
Confidence 221 12246777 5578999863
No 179
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.27 E-value=0.00011 Score=63.98 Aligned_cols=178 Identities=9% Similarity=0.055 Sum_probs=108.1
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeee-cCc---------------CccCeEEcCCCcEEEEeCCCc
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLI-GGD---------------TLLGITTTQENEILVCDADKG 138 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~-~~~---------------p~~gl~~d~~g~l~v~~~~~~ 138 (289)
....++++.++++.. ++..++.|..++ .+++....... ... .. .+.+.+++.++++.....
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 228 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDKFVIPGPKGA 228 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS-CCEEEETTEEEEECGGGC
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee-EEEEcCCCEEEEEcCCCe
Confidence 446678998888754 677889999998 45543322211 111 45 888888877777765566
Q ss_pred eEEEe-CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE-Eee
Q 022967 139 LLKVT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILL 214 (289)
Q Consensus 139 i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~ 214 (289)
+..++ ..+ ...+.. . ......+++.++|.++++... .+.|..+|..+++.. .+.
T Consensus 229 i~~~d~~~~~~~~~~~~-~----~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~ 286 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIG-H----HGPISVLEFNDTNKLLLSASD-----------------DGTLRIWHGGNGNSQNCFY 286 (425)
T ss_dssp EEEEETTCSSCSEEECC-C----SSCEEEEEEETTTTEEEEEET-----------------TSCEEEECSSSBSCSEEEC
T ss_pred EEEEEcCCCceeeeecc-C----CCceEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCccceEec
Confidence 88888 555 333321 1 124568899999976555332 366888887655432 232
Q ss_pred CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 215 ~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
........+++++++ .++.+ ...+.|..||+..... ...+. ........+++..+|++.++..
T Consensus 287 ~~~~~i~~~~~~~~~-~l~~~-~~d~~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 287 GHSQSIVSASWVGDD-KVISC-SMDGSVRLWSLKQNTL--LALSI-VDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp CCSSCEEEEEEETTT-EEEEE-ETTSEEEEEETTTTEE--EEEEE-CTTCCEEEEEECTTSSEEEEEE
T ss_pred CCCccEEEEEECCCC-EEEEE-eCCCcEEEEECCCCcE--eEecc-cCCccEEEEEEcCCCCEEEEEE
Confidence 233455788999988 45444 5568999999764321 11121 2223456678888886655443
No 180
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.27 E-value=0.00054 Score=57.59 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=95.9
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEe-CCCceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g--~~~ 149 (289)
....++++.++|++. ++..++.|..++ .+++.. .+........ .+++.++++++++. ....+..+| .++ ...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 345678999988766 666889999999 455533 2322233345 78899988766654 335577777 555 333
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE-eeC-CCCCcceEEEec
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLD-SLFFANGVALSK 227 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~-~~~-~~~~p~gl~~~~ 227 (289)
+... ......+++.++|.++++... .+.|..+|..+++... +.. .......++++|
T Consensus 145 ~~~~-----~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 145 LPAH-----SDPVSAVHFNRDGSLIVSSSY-----------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp ECCC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred ecCC-----CCcEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 3211 123568899999986665432 3678888887665432 222 222345689999
Q ss_pred CCCEEEEEeCCCCeEEEEEecC
Q 022967 228 DEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 228 d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+++.|+.+. ..+.|..||+..
T Consensus 203 ~~~~l~~~~-~d~~i~iwd~~~ 223 (312)
T 4ery_A 203 NGKYILAAT-LDNTLKLWDYSK 223 (312)
T ss_dssp TSSEEEEEE-TTTEEEEEETTT
T ss_pred CCCEEEEEc-CCCeEEEEECCC
Confidence 999776664 458899999764
No 181
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.25 E-value=0.00014 Score=63.85 Aligned_cols=155 Identities=12% Similarity=0.063 Sum_probs=95.7
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCce-EEeeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~ 149 (289)
....++++.++|++. ++..++.|..++ .+++. ..+........ .+++.+++.++++ .....+..++ .++ ...
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVT-DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 456778999988755 667889999999 44543 33333334445 8999998875554 4434577777 555 333
Q ss_pred EEeccC-Cc------------------cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE
Q 022967 150 LASHVN-GS------------------RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET 210 (289)
Q Consensus 150 ~~~~~~-~~------------------~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~ 210 (289)
+..... .. .......++++++|.+.++.. ..+.|..+|..+++.
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------------~dg~i~i~d~~~~~~ 281 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-----------------VSGVITVHNVFSKEQ 281 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-----------------TTSCEEEEETTTCCE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-----------------CCCeEEEEECCCCce
Confidence 321100 00 012344667788886555432 246788888876654
Q ss_pred EEe-eC-CCCCcceEEEecCCC-EEEEEeCCCCeEEEEEecCC
Q 022967 211 SIL-LD-SLFFANGVALSKDED-YLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 211 ~~~-~~-~~~~p~gl~~~~d~~-~l~v~~~~~~~i~~~~~~~~ 250 (289)
... .. .......++|+|+++ .|+.+ ...+.|..||+...
T Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~~l~~g-~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 282 TIQLPSKFTCSCNSLTVDGNNANYIYAG-YENGMLAQWDLRSP 323 (420)
T ss_dssp EEEECCTTSSCEEEEEECSSCTTEEEEE-ETTSEEEEEETTCT
T ss_pred eEEcccccCCCceeEEEeCCCCCEEEEE-eCCCeEEEEEcCCC
Confidence 332 22 233467899999998 55555 45689999998753
No 182
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.22 E-value=0.00076 Score=57.21 Aligned_cols=180 Identities=10% Similarity=0.088 Sum_probs=105.9
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC--eEEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG--VTVLA 151 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g--~~~~~ 151 (289)
.-.++++.++|++. .+..++.|..++ .+|+.. .+........ .+++++++.++++... ..+..++-.+ ...+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL 145 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 34567888888765 666889999999 556533 3333334445 8999998886665433 4466666333 43332
Q ss_pred eccCCccccCccceEEcCC------CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEE
Q 022967 152 SHVNGSRINLADDLIAATD------GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVA 224 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~d------G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~ 224 (289)
.. ......+.+.|+ +.+.++.. ..+.|..+|..+.+..... ......+.++
T Consensus 146 ~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 203 (319)
T 3frx_A 146 GH-----NDWVSQVRVVPNEKADDDSVTIISAG-----------------NDKMVKAWNLNQFQIEADFIGHNSNINTLT 203 (319)
T ss_dssp CC-----SSCEEEEEECCC------CCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCCSCEEEEE
T ss_pred cc-----CCcEEEEEEccCCCCCCCccEEEEEe-----------------CCCEEEEEECCcchhheeecCCCCcEEEEE
Confidence 11 113445566553 33444432 2466777887766554333 3334557899
Q ss_pred EecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
++|+++.|..+ ...+.|..||+..... ...+. .......+++.++|.+.++....+
T Consensus 204 ~sp~g~~l~s~-~~dg~i~iwd~~~~~~--~~~~~--~~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 204 ASPDGTLIASA-GKDGEIMLWNLAAKKA--MYTLS--AQDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp ECTTSSEEEEE-ETTCEEEEEETTTTEE--EEEEE--CCSCEEEEEECSSSSEEEEEETTE
T ss_pred EcCCCCEEEEE-eCCCeEEEEECCCCcE--EEEec--CCCcEEEEEEcCCCCEEEEEcCCC
Confidence 99999955555 4568899999765322 11111 122345677777777665554443
No 183
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.21 E-value=2e-05 Score=72.92 Aligned_cols=169 Identities=14% Similarity=0.125 Sum_probs=99.4
Q ss_pred cceEEEccCC--CEEEEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEE-eCC----CceEEEe-CCC-eE
Q 022967 79 PEDVCVDRNG--VLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVC-DAD----KGLLKVT-EEG-VT 148 (289)
Q Consensus 79 p~~l~~d~~g--~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~-~~~----~~i~~~~-~~g-~~ 148 (289)
....++.++| .+|++...+.+..++ .+|+...+..... . .+++++||+.++. ... ..|+.+| .+| .+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3344555555 356666556666777 4566555544333 5 8899999986653 222 3488888 667 66
Q ss_pred EEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEE----
Q 022967 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA---- 224 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~---- 224 (289)
.+... . .....+++.|||+..++... .....|+++|.++++...+.........++
T Consensus 189 ~l~~~-~----~~~~~~~~SpDG~~l~~~~~---------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 189 VFDSG-E----GSFSSASISPGMKVTAGLET---------------AREARLVTVDPRDGSVEDLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EECCS-S----CEEEEEEECTTSCEEEEEEC---------------SSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEE
T ss_pred EeecC-C----CccccceECCCCCEEEEccC---------------CCeeEEEEEcCCCCcEEEccCCCcChhhhhhccc
Confidence 55321 1 13468899999974443211 112379999999888773322222334456
Q ss_pred ----EecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEE
Q 022967 225 ----LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA 280 (289)
Q Consensus 225 ----~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~ 280 (289)
|+|||. +|++....+.+..|++ |... . .+.+....+++. +|.+++.
T Consensus 249 ~~~~~spdg~-~~~~~~~~g~~~l~~~-g~~~----~---~~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 249 TWLGYLPDGR-LAVVARREGRSAVFID-GERV----E---APQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp EEEEECTTSC-EEEEEEETTEEEEEET-TEEE----C---CCSSEEEEEEEE-TTEEEEE
T ss_pred cceeEcCCCc-EEEEEEcCCcEEEEEE-CCee----c---cCCCceEEEEec-CCEEEEE
Confidence 999994 7776666677888876 3211 1 111233456666 6765544
No 184
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.21 E-value=0.00054 Score=58.16 Aligned_cols=179 Identities=13% Similarity=0.096 Sum_probs=103.8
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEecCCce-EEeeeecCcCccCeEEcC------CCcEEE-EeCCCceEEEe-CCC-
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNGTW-ENWKLIGGDTLLGITTTQ------ENEILV-CDADKGLLKVT-EEG- 146 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~-~~~~~~~~~p~~gl~~d~------~g~l~v-~~~~~~i~~~~-~~g- 146 (289)
...++++.+++.+. .+..++.|..++.+++. ..+........ .+.+.+ ++.+++ +.....+..++ .++
T Consensus 109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVS-QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187 (319)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECCC------CCEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEE-EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch
Confidence 45678888888765 66788999999965543 22222222233 566654 333444 44434566666 444
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEe
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALS 226 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~ 226 (289)
........ ......+++.|+|.+.++... .+.|..+|..+++.............++|+
T Consensus 188 ~~~~~~~h----~~~v~~~~~sp~g~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 246 (319)
T 3frx_A 188 IEADFIGH----NSNINTLTASPDGTLIASAGK-----------------DGEIMLWNLAAKKAMYTLSAQDEVFSLAFS 246 (319)
T ss_dssp EEEEECCC----CSCEEEEEECTTSSEEEEEET-----------------TCEEEEEETTTTEEEEEEECCSCEEEEEEC
T ss_pred hheeecCC----CCcEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEecCCCcEEEEEEc
Confidence 22211111 124678999999987776432 467888888776654433344456789999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceeeeecc-------CCCCCCceeeCCCCCEEEEEe
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN-------LPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~p~~i~~d~~G~lwv~~~ 282 (289)
|++..+..+.. ..+..|+++..... ..+... .......++..++|.+.++..
T Consensus 247 p~~~~la~~~~--~~i~v~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 247 PNRYWLAAATA--TGIKVFSLDPQYLV--DDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp SSSSEEEEEET--TEEEEEEETTEEEE--EEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEcC--CCcEEEEeCcCeee--eccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 99997776643 56777877643211 111000 112234578888887665544
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.21 E-value=0.00013 Score=63.29 Aligned_cols=166 Identities=17% Similarity=0.222 Sum_probs=96.2
Q ss_pred EEEccCCC-EEEEec-CC--eEEEEec-CCceEEeeeecCc-CccCeEEcCCCc-EEEEeCCCceEEEe-CCC-eEEEEe
Q 022967 82 VCVDRNGV-LYTATR-DG--WIKRLHK-NGTWENWKLIGGD-TLLGITTTQENE-ILVCDADKGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 82 l~~d~~g~-l~v~~~-~g--~i~~~~~-~g~~~~~~~~~~~-p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g-~~~~~~ 152 (289)
.++.|||+ |++... ++ .|+.++. .|+...+...... .. +.++.+||+ |+++.....++.++ .+| .+.+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~-~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF-GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS-SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc-ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 46778887 444443 45 5888984 5555544433332 34 678999996 66666556799999 666 444433
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCC--ccC-cccc--ccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEec
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVAST--KFG-LHNW--GLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSK 227 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~--~~~-~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~ 227 (289)
...+ ........+++||.+.+..... .+. ...+ ............|+.+|.++++...+.........++|+|
T Consensus 120 ~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 120 VPAE--WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp CCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred chhh--cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 2111 1111123457888766542100 000 0000 0011122334689999999888777765555567889999
Q ss_pred -CCCEEEEEeCC-----CCeEEEEEecCC
Q 022967 228 -DEDYLVVCETF-----KFRCLKYWLKGE 250 (289)
Q Consensus 228 -d~~~l~v~~~~-----~~~i~~~~~~~~ 250 (289)
|++.|.++... ..+|+.++.++.
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 99877665543 358999987764
No 186
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.20 E-value=0.00033 Score=66.15 Aligned_cols=184 Identities=14% Similarity=0.099 Sum_probs=109.1
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEE-eCCCceEEEeCCC--eEEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVC-DADKGLLKVTEEG--VTVLA 151 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~~~g--~~~~~ 151 (289)
...++++.++|++. ++..++.|..++ .+++.. .+........ .+++.++++.+++ ..+..|..++..+ ...+.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec
Confidence 35678899988866 666889999999 455433 3333334455 8999998875555 4434566666333 22222
Q ss_pred eccCCccccCccceEEcCCC--cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcceEEEecC
Q 022967 152 SHVNGSRINLADDLIAATDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKD 228 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG--~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~gl~~~~d 228 (289)
....+ .......+++.+++ .+.++.. ..+.|..+|..+++......+ ......++++|+
T Consensus 511 ~~~~~-h~~~v~~~~~~~~~~~~~l~s~s-----------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 511 EGGEG-HRDWVSCVRFSPNTLQPTIVSAS-----------------WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp SSTTS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cCCCC-CCCcEEEEEEeCCCCcceEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 11111 11245688898886 3444432 236677788776665444333 344578999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
++.|..+ ...+.|..||+..... ............+++.+++.+.++...++
T Consensus 573 g~~l~sg-~~Dg~i~iwd~~~~~~----~~~~~~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 573 GSLCASG-GKDGVVLLWDLAEGKK----LYSLEANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp SSEEEEE-ETTSBCEEEETTTTEE----EECCBCSSCEEEEEECSSSSEEEEEETTE
T ss_pred CCEEEEE-eCCCeEEEEECCCCce----EEEecCCCcEEEEEEcCCCcEEEEEcCCC
Confidence 9955544 5568899998764321 11101123345677777777766665544
No 187
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.20 E-value=2e-05 Score=68.25 Aligned_cols=187 Identities=8% Similarity=-0.095 Sum_probs=99.0
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCc----eEEeeeecCcCccCeEEcCCCcEEE-EeCCCceEEEe-CCC-e-
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT----WENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-V- 147 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~----~~~~~~~~~~p~~gl~~d~~g~l~v-~~~~~~i~~~~-~~g-~- 147 (289)
...++++.++|++. ++..++.|..++ .+++ ...+........ .+++.+++++++ +.....+..++ ..+ .
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----C
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCcccc
Confidence 35678899887654 667889999998 3443 222222233344 888988886444 44434466666 333 1
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC------------------Ce
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL------------------NE 209 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~------------------~~ 209 (289)
... ....+........+++.|+|.+.++... .+.|..+|... ++
T Consensus 136 ~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 136 WVS-KHLKRPLRSTILSLDWHPNNVLLAAGCA-----------------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp CCC-EEECSSCCSCEEEEEECTTSSEEEEEES-----------------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred eee-eEeecccCCCeEEEEEcCCCCEEEEEeC-----------------CCEEEEEEEEecccCCCccccccccccchhh
Confidence 111 1111111235678999999976665332 24455555421 11
Q ss_pred EEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcc--eeeeeccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 210 TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ--TEIFVENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 210 ~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
.............++|+|+++.|+.+ ...+.|..||+....... ...+. ........++...+|.+.++...++
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNYS 273 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSSS
T ss_pred hhhcccCCceEEEEEECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCCc
Confidence 11111223345678999999966666 455889999987543210 11111 1122345677777777666655443
No 188
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.20 E-value=3.5e-05 Score=66.95 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=81.5
Q ss_pred CeEEEEe-cCCceEEeeeecCcCccCeEEcC-CCc-EEEEeC------CCceEEEeC-CC-eEEEEeccCCccccCccce
Q 022967 97 GWIKRLH-KNGTWENWKLIGGDTLLGITTTQ-ENE-ILVCDA------DKGLLKVTE-EG-VTVLASHVNGSRINLADDL 165 (289)
Q Consensus 97 g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~-~g~-l~v~~~------~~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l 165 (289)
..|+.++ .+|+...+........ .+++.+ ||+ |.++.. ...|+.++. .+ .+.+.....+ ......
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~~~-~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~---~~~~~~ 243 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQWLG-HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG---ESCTHE 243 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEE-EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTT---EEEEEE
T ss_pred ceEEEEECCCCceEEeecCCcccc-ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCC---cccccc
Confidence 5788888 5677666655444455 788988 886 433332 136888884 44 5444321110 123467
Q ss_pred EEcCCCc-EEE-eeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC------CCcceEEEecCCCEEEEEe-
Q 022967 166 IAATDGS-IYF-SVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL------FFANGVALSKDEDYLVVCE- 236 (289)
Q Consensus 166 ~~~~dG~-lyv-~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~------~~p~gl~~~~d~~~l~v~~- 236 (289)
++.|||+ |++ +... ......|+.+|.++++.+.+.... ..+.+++|+|||+.|+++.
T Consensus 244 ~~spdg~~l~~~~~~~--------------~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLK--------------GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp EECTTSSCEEEEEEET--------------TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred eECCCCCEEEEEecCC--------------CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 8999996 644 3321 011135999999888765542211 1256778999999888753
Q ss_pred -------CCCCeEEEEEecCCC
Q 022967 237 -------TFKFRCLKYWLKGES 251 (289)
Q Consensus 237 -------~~~~~i~~~~~~~~~ 251 (289)
.+...|+++++++..
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 310 DDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp -------CCCCEEEEEETTTTE
T ss_pred eccccccCCCCEEEEEeccCCc
Confidence 456789999987643
No 189
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.18 E-value=0.00027 Score=59.52 Aligned_cols=150 Identities=9% Similarity=0.041 Sum_probs=93.9
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTVL 150 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~ 150 (289)
..-.++++.|+|.+. ++..+|.|..++ .++...........+...+++.++++++++... ..|..++ .++ +..+
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 456789999988866 666889999999 445433222222333337888888876665433 4566677 556 3333
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC-eEEEeeC-CCCCcceEEEec-
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLD-SLFFANGVALSK- 227 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~-~~~~p~gl~~~~- 227 (289)
... . .....+++.|++.+.++... .+.|..+|.+++ ....... .......++|+|
T Consensus 94 ~~h-~----~~v~~~~~~~~~~~l~sgs~-----------------D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 94 EAH-P----DYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp ECC-S----SCEEEEEECSSSSEEEEEET-----------------TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred eCC-C----CcEEEEEEcCCCCEEEEECC-----------------CCeEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 211 1 24678999999987666432 356777776544 3333323 334457889999
Q ss_pred CCCEEEEEeCCCCeEEEEEecC
Q 022967 228 DEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 228 d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
++. ++++....+.|..||+..
T Consensus 152 ~~~-~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 152 DPS-TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp CTT-EEEEEETTSEEEEEETTC
T ss_pred CCC-EEEEEeCCCeEEEEECCC
Confidence 455 555555668899999754
No 190
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.17 E-value=0.00011 Score=64.18 Aligned_cols=184 Identities=12% Similarity=0.072 Sum_probs=104.0
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEecCC----c--eEEeeeecCcCccCeEEcCC-CcEEEEeCC-CceEEEe-CCCe
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNG----T--WENWKLIGGDTLLGITTTQE-NEILVCDAD-KGLLKVT-EEGV 147 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g----~--~~~~~~~~~~p~~gl~~d~~-g~l~v~~~~-~~i~~~~-~~g~ 147 (289)
...++++.++|.+. ++..+|.|..++.+. . ...+........ .+++.++ ++++++... ..|..++ ..+.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 45678898887755 667889999998322 2 222222233445 8999987 665555433 4466666 3321
Q ss_pred ------EEEEeccCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC----
Q 022967 148 ------TVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---- 216 (289)
Q Consensus 148 ------~~~~~~~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~---- 216 (289)
..+..............+++.++ +.++++... .+.|..+|.++++.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-----------------SNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-----------------SSCEEEEETTTTEEEEEECCCCCS
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-----------------CCCEEEEECCCCCcceEEeccccc
Confidence 22111000111235678999998 566666432 46788888877665443332
Q ss_pred ---CCCcceEEEecCCCEEEEEeCCCC---eEEEEEecCCCCcceeeeeccCCCCCCceeeCC-CCCEEEE
Q 022967 217 ---LFFANGVALSKDEDYLVVCETFKF---RCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIA 280 (289)
Q Consensus 217 ---~~~p~gl~~~~d~~~l~v~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~lwv~ 280 (289)
......++|+|++..++++....+ .|..||+...... ...+..........++... +|.+.++
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s 280 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQTLNQGHQKGILSLDWCHQDEHLLLS 280 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBCCCSCCSSCEEEEEECSSCSSCEEE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEEeecCccCceeEEEeCCCCCCeEEE
Confidence 345678999999854555545555 8999998653111 1111101123345577765 5654443
No 191
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.17 E-value=9.8e-05 Score=63.97 Aligned_cols=178 Identities=8% Similarity=-0.011 Sum_probs=101.2
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCc-EEEE-eCCCceEEEe-CCC--eEEE
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENE-ILVC-DADKGLLKVT-EEG--VTVL 150 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~-l~v~-~~~~~i~~~~-~~g--~~~~ 150 (289)
..++++.++|+.. ++..++.|..++ .+++...... ...... .+++.+++. ++++ .....|..+| ..+ ...+
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~-~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~ 220 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN-CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI 220 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE-EEEEccCCCceeeeeccCCceEEEECCCCceeeee
Confidence 4668899988766 667889999999 4554433222 233344 788877663 4444 4334466666 444 2221
Q ss_pred EeccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~gl~~~~d 228 (289)
... .....+..+++.|++ .++++.. ..+.|..+|..+++......+ ......++|+|+
T Consensus 221 ~~~---~~~~~v~~v~~sp~~~~~la~g~-----------------~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 221 DFC---ASDTIPTSVTWHPEKDDTFACGD-----------------ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYH 280 (357)
T ss_dssp CCT---TCCSCEEEEEECTTSTTEEEEEE-----------------SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSS
T ss_pred eec---cccccccchhhhhcccceEEEee-----------------cccceeEEECCCCcEeEEEeccceeEEEEEEcCC
Confidence 111 111245688899875 5554422 235688888766554333333 334578999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCC-CCCEEEEE
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAI 281 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~lwv~~ 281 (289)
++.++++-...+.|..||++..... ... ...+....+++.+ +|.++++.
T Consensus 281 ~~~~lasgs~D~~i~iwd~~~~~~~---~~~-~H~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 281 SSPFLASISEDCTVAVLDADFSEVF---RDL-SHRDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp SSCCEEEEETTSCEEEECTTSCEEE---EEC-CCSSCEEEEEECSSSTTEEEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEe---EEC-CCCCCEEEEEEeCCCCCEEEEE
Confidence 8656665556688999987643221 111 1223345566663 56555443
No 192
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.17 E-value=0.00042 Score=61.13 Aligned_cols=177 Identities=11% Similarity=0.112 Sum_probs=104.5
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEec-CCceEE-eeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHK-NGTWEN-WKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTVL 150 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~-~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~ 150 (289)
...++++.++|.+. ++..++.|..|+. +++... +........ .+++.++|+.+++... ..+..++ .++ +..+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 34568888888766 6668888989984 344322 222223344 8999998876665433 4466677 566 4444
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEEecC-
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKD- 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d- 228 (289)
... ......+.+.++|.++++... .+.|..+|..+++..... ........++|+|+
T Consensus 231 ~~h-----~~~v~~~~~~~~g~~l~s~s~-----------------D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 231 TGH-----REWVRMVRPNQDGTLIASCSN-----------------DQTVRVWVVATKECKAELREHRHVVECISWAPES 288 (410)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred eCC-----CccEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCceeeEecCCCceEEEEEEcCcc
Confidence 221 124567889999987776432 356777777666544332 22333466778775
Q ss_pred -------------------CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 229 -------------------EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 229 -------------------~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
+. ++++....+.|..||+..... ...+. ...+...++++..+|.+.++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~~--~~~~~-~h~~~v~~v~~~~~g~~l~s~ 356 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGMC--LMTLV-GHDNWVRGVLFHSGGKFILSC 356 (410)
T ss_dssp GGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTEE--EEEEE-CCSSCEEEEEECSSSSCEEEE
T ss_pred cccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCce--EEEEE-CCCCcEEEEEEcCCCCEEEEE
Confidence 44 444445668899999764321 11222 222345567788777654443
No 193
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.17 E-value=4.6e-05 Score=68.64 Aligned_cols=164 Identities=13% Similarity=0.131 Sum_probs=93.8
Q ss_pred eEEeeeecCcCccCeEEcCCCc--EEEEeCCCceEEEeCCC-e--EEEEec---cC-C---ccccCccceEEcCC----C
Q 022967 108 WENWKLIGGDTLLGITTTQENE--ILVCDADKGLLKVTEEG-V--TVLASH---VN-G---SRINLADDLIAATD----G 171 (289)
Q Consensus 108 ~~~~~~~~~~p~~gl~~d~~g~--l~v~~~~~~i~~~~~~g-~--~~~~~~---~~-~---~~~~~~~~l~~~~d----G 171 (289)
++.++.....|. +|++.++|. |||++....|++++.+| . +.+... .. + .....+.+|+++|+ |
T Consensus 6 v~~va~gL~~P~-~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 6 IQEVVSGLRQPV-GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEEEESSEE-EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred EEEeccCCCCce-EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Confidence 456666778899 999999985 99999766688887544 2 222211 11 1 11245678999986 8
Q ss_pred cEEEeeCCCccCccccccccceecCCCEEEEEeCCCC--------eEEEee-----CCCCCcceEEEecCCCEEEEEeCC
Q 022967 172 SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--------ETSILL-----DSLFFANGVALSKDEDYLVVCETF 238 (289)
Q Consensus 172 ~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--------~~~~~~-----~~~~~p~gl~~~~d~~~l~v~~~~ 238 (289)
.|||+.....-+... . ......+|.|+....+ +.+++. ....+...|+|+|||+ |||+--.
T Consensus 85 ~lYv~yt~~~~~~~~---~--~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 85 KLYVSYTTNQERWAI---G--PHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp EEEEEEEECCCSSCS---S--SSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred EEEEEEeCCCCCccc---C--CcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 899975320000000 0 0000135666654311 112221 2234456799999997 9998431
Q ss_pred -----------------CCeEEEEEecCC------CCc-----------ceeeeeccCCCCCCceeeCCC-----CCEEE
Q 022967 239 -----------------KFRCLKYWLKGE------SKE-----------QTEIFVENLPGGPDNIKLAPD-----GSFWI 279 (289)
Q Consensus 239 -----------------~~~i~~~~~~~~------~~~-----------~~~~~~~~~~~~p~~i~~d~~-----G~lwv 279 (289)
..+|.|++.++. ++- ..+++...+ -.|-++++|++ |.||+
T Consensus 159 ~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~-RNp~gla~dp~tg~~~G~l~~ 237 (463)
T 2wg3_C 159 GMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGL-HDPGRCAVDRHPTDININLTI 237 (463)
T ss_dssp TTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECC-SSCCBEEEESSCSSTTCSEEE
T ss_pred CCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECC-CCcceEEECCCCCCcccceEE
Confidence 356999999873 110 123343333 24889999987 65544
No 194
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.17 E-value=0.00023 Score=61.78 Aligned_cols=154 Identities=14% Similarity=0.082 Sum_probs=96.5
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeee-------cCcCccCeEEcCCCcEEEEeCC----CceEEEe-
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLI-------GGDTLLGITTTQENEILVCDAD----KGLLKVT- 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~-------~~~p~~gl~~d~~g~l~v~~~~----~~i~~~~- 143 (289)
....++++.++|.++++..++.|..++ .+++....... ..... .++++++++++++... ..|..++
T Consensus 187 ~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~-~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 187 QFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR-SVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE-EEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccc-eEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 456789999988333667889999999 44543332222 33345 8999998886665433 3466777
Q ss_pred CCC--eEEEEeccC-Cc-------cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe
Q 022967 144 EEG--VTVLASHVN-GS-------RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL 213 (289)
Q Consensus 144 ~~g--~~~~~~~~~-~~-------~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 213 (289)
.++ +..+..... .. .......+++.|+|.++++... .+.|..+|..+++....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-----------------DGKLRFWDVKTKERITT 328 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTTEEEEE
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-----------------CCeEEEEEcCCCceeEE
Confidence 555 333321000 00 1134678999999986665432 46788888876664433
Q ss_pred eC------C----------------CCCcceEEEecCC----------CEEEEEeCCCCeEEEEEecC
Q 022967 214 LD------S----------------LFFANGVALSKDE----------DYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 214 ~~------~----------------~~~p~gl~~~~d~----------~~l~v~~~~~~~i~~~~~~~ 249 (289)
.. . ......++|++++ +. +++....+.|..|++++
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 329 LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNES-LCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCE-EEEEETTTEEEEEEEEC
T ss_pred EecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccce-EEEecCCCcEEEEEcCC
Confidence 33 2 3446789999998 54 44445568899998864
No 195
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.16 E-value=0.00045 Score=60.92 Aligned_cols=150 Identities=11% Similarity=0.091 Sum_probs=96.4
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~ 149 (289)
....++++.|++.+. .+..++.|..|+ .+|+... +........ .++++++|+++++... ..|..++ .++ +..
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE
Confidence 345678999988766 666889999999 5565433 322233445 8999999886665433 4466666 444 222
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE-EeeCCCCCcceEEEecC
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILLDSLFFANGVALSKD 228 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~~~~~p~gl~~~~d 228 (289)
+ .+. ......+++.|+|...++... .+.|..+|..++... .+.........+.++++
T Consensus 188 ~----~~h-~~~V~~v~~~p~~~~l~s~s~-----------------D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 188 M----HGH-DHNVSSVSIMPNGDHIVSASR-----------------DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp C----CCC-SSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred E----cCC-CCCEEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEeCCCccEEEEEECCC
Confidence 2 111 124678999999987666432 467888888766543 33333344567889999
Q ss_pred CCEEEEEeCCCCeEEEEEecCC
Q 022967 229 EDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
++.+..+ ...+.|..||+...
T Consensus 246 g~~l~s~-s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 246 GTLIASC-SNDQTVRVWVVATK 266 (410)
T ss_dssp SSEEEEE-ETTSCEEEEETTTC
T ss_pred CCEEEEE-cCCCeEEEEECCCC
Confidence 9955544 55688999987643
No 196
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.15 E-value=0.00026 Score=60.24 Aligned_cols=179 Identities=8% Similarity=-0.027 Sum_probs=100.6
Q ss_pred CcceEEEccC---CC-EEEEecCCeEEEEe-cCCc--eEEeeeecCcCccCe------EEcCCCcEEEE-eCCCceEEEe
Q 022967 78 GPEDVCVDRN---GV-LYTATRDGWIKRLH-KNGT--WENWKLIGGDTLLGI------TTTQENEILVC-DADKGLLKVT 143 (289)
Q Consensus 78 ~p~~l~~d~~---g~-l~v~~~~g~i~~~~-~~g~--~~~~~~~~~~p~~gl------~~d~~g~l~v~-~~~~~i~~~~ 143 (289)
...++++.++ |. |+++..+|.|..++ .+++ ...+........ .+ ++.++++++++ .....+..++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 4566788886 44 55777889999998 3343 333332222233 55 45677765554 4434577777
Q ss_pred -CCC---eEEEEeccCCccccCccceE----EcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC
Q 022967 144 -EEG---VTVLASHVNGSRINLADDLI----AATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD 215 (289)
Q Consensus 144 -~~g---~~~~~~~~~~~~~~~~~~l~----~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~ 215 (289)
..+ ...+.. ..+........++ +.+++.+.++... .+.|..+|.++++......
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 146 PRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGYD-----------------NGDIKLFDLRNMALRWETN 207 (357)
T ss_dssp TTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEET-----------------TSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEEcc-----------------CCeEEEEECccCceeeecC
Confidence 433 333321 1211112344555 5678876665432 4788899988777654444
Q ss_pred CCCCcceEEEec---CCCEEEEEeCCCCeEEEEEecCCCCcc-eeee-eccCCCCCCceeeCCCCC
Q 022967 216 SLFFANGVALSK---DEDYLVVCETFKFRCLKYWLKGESKEQ-TEIF-VENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 216 ~~~~p~gl~~~~---d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~-~~~~~~~p~~i~~d~~G~ 276 (289)
.......++++| +++.++++ ...+.|..||+....... .... ..........++..++|.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 445567899999 88877766 455889999986432211 1100 011223345566777665
No 197
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.15 E-value=0.00019 Score=66.82 Aligned_cols=183 Identities=9% Similarity=0.032 Sum_probs=104.8
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCCCc-eEEEe-CCC--e-EE
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDADKG-LLKVT-EEG--V-TV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~~~-i~~~~-~~g--~-~~ 149 (289)
..+..++++|+|+..+...++.|..++ .+++.. .+........ .++|.++|++.++....+ +..+| .++ . ..
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~ 97 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT 97 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE
Confidence 457889999999876544467888888 345433 3333333344 899999998776644444 55556 333 2 21
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCC
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~ 229 (289)
...... ....+++++|||...++.+.. ....+.|+.+|.. .....+.......+.++|+|++
T Consensus 98 ~~~~~~----~~v~~v~fs~dg~~l~~~~~~-------------~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 98 TIPVFS----GPVKDISWDSESKRIAAVGEG-------------RERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp EEECSS----SCEEEEEECTTSCEEEEEECC-------------SSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSS
T ss_pred eecccC----CceEEEEECCCCCEEEEEECC-------------CCceeEEEEeeCC-CCcceecCCCCCceEEEECCCC
Confidence 111111 246789999999866654320 0012456666632 2222222233445788999998
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
...+++....+.|..|+....+ ....+ .........+++.++|.+.++.
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~--~~~~l-~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFK--FKSTF-GEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBE--EEEEE-CCCSSCEEEEEECTTSSEEEEE
T ss_pred CeEEEEEeCCCeEEEEECCCCe--Eeeee-ccccCceEEEEECCCCCEEEEE
Confidence 7656666667888888854321 11122 1222334567777777665544
No 198
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00087 Score=57.37 Aligned_cols=184 Identities=16% Similarity=0.134 Sum_probs=103.1
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEecC-CceEE---eeeecCcCccCeEEcCC--CcEEEE-eCCCceEEEe-CCC-
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKN-GTWEN---WKLIGGDTLLGITTTQE--NEILVC-DADKGLLKVT-EEG- 146 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~~-g~~~~---~~~~~~~p~~gl~~d~~--g~l~v~-~~~~~i~~~~-~~g- 146 (289)
..-.++++.++|.+. ++..+|.|..++.+ +.... +........ .+++.++ ++++++ ..+..|..++ .++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 345678899988765 66688989999832 22221 222223334 7888755 665554 4434566667 555
Q ss_pred eEEEEeccCCccccCccceEEcCC--CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe---EEEeeCCCCCcc
Q 022967 147 VTVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFAN 221 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~d--G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~---~~~~~~~~~~p~ 221 (289)
...+... .. .......+++.|+ |.+.++... .+.|..+|..++. ...+........
T Consensus 91 ~~~~~~~-~~-~~~~v~~~~~~~~~~~~~l~~~~~-----------------d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 91 WSQIAVH-AV-HSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred eeEeeee-cC-CCcceEEEEeCCCCCCCEEEEecC-----------------CCcEEEEecCCCCceeeEEecCCCCceE
Confidence 3332221 11 1134678899998 776555432 3677777776542 222333344557
Q ss_pred eEEEec-------------CCCEEEEEeCCCCeEEEEEecCCCCc-ceeeeeccCCCCCCceeeCCC---CCEEEEE
Q 022967 222 GVALSK-------------DEDYLVVCETFKFRCLKYWLKGESKE-QTEIFVENLPGGPDNIKLAPD---GSFWIAI 281 (289)
Q Consensus 222 gl~~~~-------------d~~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~---G~lwv~~ 281 (289)
.++++| +++.++.+ ...+.|..||+...... ...............++..++ |.+.++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp EEEECCCC----------CTTCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred EEEEcCccccccccccCCCCCCEEEEE-eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 788998 57755555 45578999998754321 111111122233455777776 5544444
No 199
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.14 E-value=0.00087 Score=58.64 Aligned_cols=176 Identities=8% Similarity=0.002 Sum_probs=106.7
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-C-CC--eEEE
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-E-EG--VTVL 150 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~-~g--~~~~ 150 (289)
...++++.++|.+. ++..+|.|..++ .+++.. .+........ .+.++. ..++.+.....+..++ . .+ ...+
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~ 213 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG-CLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTL 213 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEEET-TEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE-EEEECC-CEEEEEcCCCCEEEEecccCcceeeEE
Confidence 35678888888755 677889999998 445433 3322233344 788843 2444455445566777 4 23 3333
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEEecCC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDE 229 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d~ 229 (289)
.. .. ....++++.++|.++++... .+.|..+|..+++..... ........++|+|++
T Consensus 214 ~~-~~----~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 214 QG-HS----SEVCGLAWRSDGLQLASGGN-----------------DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 271 (401)
T ss_dssp EC-CS----SCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTS
T ss_pred cC-CC----CCeeEEEEcCCCCEEEEEeC-----------------CCeEEEccCCCCCccEEecCCcceEEEEEECCCC
Confidence 21 11 24678999999986665432 367888888766544333 334456789999988
Q ss_pred CEEEEEeC--CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 230 DYLVVCET--FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 230 ~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
+.++++.. ..+.|..||+..... ...+ ........++...+|.+.+++
T Consensus 272 ~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHFWNAATGAR--VNTV--DAGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp TTEEEEECCTTTCEEEEEETTTCCE--EEEE--ECSSCEEEEEECSSSSEEEEE
T ss_pred CCEEEEecCCCCCEEEEEECCCCCE--EEEE--eCCCcEEEEEECCCCCeEEEE
Confidence 87888754 578899999764322 1111 112335567777777655553
No 200
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.14 E-value=0.0014 Score=56.45 Aligned_cols=177 Identities=15% Similarity=0.191 Sum_probs=105.7
Q ss_pred cceEEEccCCC-EEEEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcC--CCcEEE-EeCCCceEEEe-CCC--eEE
Q 022967 79 PEDVCVDRNGV-LYTATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQ--ENEILV-CDADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 79 p~~l~~d~~g~-l~v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~--~g~l~v-~~~~~~i~~~~-~~g--~~~ 149 (289)
..++++.+++. |+++..++.|..++ .+++.. .+........ .+.+.+ +|++++ +..+..+..+| .++ ...
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 34677888765 55777899999999 556543 3322223333 566654 555555 44445677788 566 333
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC---CCCcceEEEe
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---LFFANGVALS 226 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~---~~~p~gl~~~ 226 (289)
+.. . ....+.+++.|+|.++++... .+.|..+|...++....... ......++|+
T Consensus 236 ~~~-h----~~~v~~v~~~p~~~~l~s~s~-----------------D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 236 FET-H----ESDVNSVRYYPSGDAFASGSD-----------------DATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp ECC-C----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred ecC-C----CCCeEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 321 1 124678999999987766432 35677778765543322221 2234678999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
++++.|+.+. ..+.|..||+..... ...+. ...+....+++.++|.+.++..
T Consensus 294 ~~g~~l~~g~-~d~~i~vwd~~~~~~--~~~l~-~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 294 LSGRLLFAGY-NDYTINVWDVLKGSR--VSILF-GHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp TTSSEEEEEE-TTSCEEEEETTTCSE--EEEEC-CCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCCEEEEEE-CCCcEEEEECCCCce--EEEEE-CCCCcEEEEEECCCCCEEEEEc
Confidence 9999666664 558899999753221 11221 2223456688888886555543
No 201
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.13 E-value=0.0007 Score=58.96 Aligned_cols=152 Identities=13% Similarity=0.178 Sum_probs=96.0
Q ss_pred ceEEEcc-CCCEE-EEecCCeEEEEec--CCc-eEEeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEE
Q 022967 80 EDVCVDR-NGVLY-TATRDGWIKRLHK--NGT-WENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTVL 150 (289)
Q Consensus 80 ~~l~~d~-~g~l~-v~~~~g~i~~~~~--~g~-~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~ 150 (289)
.++.+.+ +++++ .+..++.|..||. .+. ...+....+... .+++.++|..+++... ..+..+| ..+ +..+
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 4466655 66666 6668899999983 222 333333334455 8999999987776544 4466677 566 3333
Q ss_pred EeccC--CccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-----CCCCCcceE
Q 022967 151 ASHVN--GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-----DSLFFANGV 223 (289)
Q Consensus 151 ~~~~~--~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-----~~~~~p~gl 223 (289)
..... .........+++.++|.+.++... .+.|+.+|...++..... ........+
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----------------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYS-----------------NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------------TSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred cccccccccccCceEEEEECCCCCEEEEEEC-----------------CCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 22111 111224678999999987776433 467888887766543322 123345778
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 224 ALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+|+||++.| ++-...+.|..|++.+.
T Consensus 351 ~~s~dg~~l-~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 351 GLSSDGSAL-CTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EECSSSSEE-EEECTTSCEEEEECCSS
T ss_pred EECCCCCEE-EEeeCCCCEEEEecCCC
Confidence 999999955 45466788999987653
No 202
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.13 E-value=3e-05 Score=73.39 Aligned_cols=137 Identities=7% Similarity=-0.066 Sum_probs=85.2
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeeecC----cCccCeEEcCCCcEEE-EeCC---------CceEEE
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGG----DTLLGITTTQENEILV-CDAD---------KGLLKV 142 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~----~p~~gl~~d~~g~l~v-~~~~---------~~i~~~ 142 (289)
.+.++++.++|++++...+|.|+.++ .+|+......... ... .+++.+||+..+ +... ..++.+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 36677888888866556778899998 4565544433222 245 899999998444 4321 346677
Q ss_pred e-CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CC
Q 022967 143 T-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LF 218 (289)
Q Consensus 143 ~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~ 218 (289)
+ .+| .+.+... .+ ....+..++++|||+ |.++. .+.|+.++.++++...+... ..
T Consensus 97 d~~~~~~~~l~~~-~~-~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 97 KIPHGDPQSLDPP-EV-SNAKLQYAGWGPKGQQLIFIF-------------------ENNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp ESSSCCCEECCCT-TC-CSCCCSBCCBCSSTTCEEEEE-------------------TTEEEEESSSSSCCEEEECCCBT
T ss_pred ECCCCceEeccCC-cc-ccccccccEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEecCCCC
Confidence 7 556 5433221 11 111256789999995 55543 14688888877765544332 11
Q ss_pred ------------------CcceEEEecCCCEEEEEe
Q 022967 219 ------------------FANGVALSKDEDYLVVCE 236 (289)
Q Consensus 219 ------------------~p~gl~~~~d~~~l~v~~ 236 (289)
...+++|+|||+.|+++.
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 225799999999887764
No 203
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.12 E-value=0.00077 Score=59.74 Aligned_cols=184 Identities=11% Similarity=0.097 Sum_probs=108.4
Q ss_pred CCcceEEEccC-CCEE-EEecCCeEEEEec-C--------C--c-eEEeeeecCcCccCeEEcCCCc-EEEEeCC-CceE
Q 022967 77 NGPEDVCVDRN-GVLY-TATRDGWIKRLHK-N--------G--T-WENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLL 140 (289)
Q Consensus 77 ~~p~~l~~d~~-g~l~-v~~~~g~i~~~~~-~--------g--~-~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-~~i~ 140 (289)
..+.++++.++ ++++ ++..+|.|..++. . + . ...+........ ++++++++. ++++... ..|.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeEE
Confidence 45788999986 5555 6667899999982 2 1 1 222233334456 999998876 5555433 4566
Q ss_pred EEe-CCC---eEEEE--eccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC----e
Q 022967 141 KVT-EEG---VTVLA--SHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN----E 209 (289)
Q Consensus 141 ~~~-~~g---~~~~~--~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~----~ 209 (289)
.++ ..+ ...+. ....+ ....+.++++.| ++.++++... .+.|..+|.+++ .
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCSCSSSC
T ss_pred EEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCCCCcc
Confidence 666 432 11111 01111 112467899999 5677766432 477888887754 2
Q ss_pred EEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCC-CEEEEE
Q 022967 210 TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAI 281 (289)
Q Consensus 210 ~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwv~~ 281 (289)
...+......++.++|+|+++.++++....+.|..||+..... ....+. ...+....+....+| .++++.
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~-~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFE-SHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEE-CCSSCEEEEEECSSCTTEEEEE
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEee-cCCCCEEEEEECCCCCCEEEEE
Confidence 2233333455788999999987777766778999999864221 111221 222344567777777 344443
No 204
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.12 E-value=0.0006 Score=65.17 Aligned_cols=150 Identities=9% Similarity=0.030 Sum_probs=95.8
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~ 149 (289)
....++++.|+|.+. ++..+|.|..|+ .+|+... +....+... .++|.++|.++++ .....|..++ .++ ...
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 457889999988865 677889999999 5565433 332233344 8999999875554 4434577777 566 333
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC-eEEE-eeCCCCCcceEEEec
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSI-LLDSLFFANGVALSK 227 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~-~~~~~~~p~gl~~~~ 227 (289)
+... . .....+++.|+|...++.. ..+.|..++.+++ .... +.........++|+|
T Consensus 93 ~~~~-~----~~v~~~~~s~~~~~l~~~~-----------------~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 93 FEAH-P----DYIRSIAVHPTKPYVLSGS-----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EECC-S----SCEEEEEECSSSSEEEEEE-----------------TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred EecC-C----CCEEEEEEeCCCCEEEEEc-----------------CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 3211 1 2467899999997544432 1366777776654 3333 333334457889999
Q ss_pred -CCCEEEEEeCCCCeEEEEEecCC
Q 022967 228 -DEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 228 -d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+++.++.+ ...+.|..|++.+.
T Consensus 151 ~~~~~l~~~-~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 151 KDPSTFASG-CLDRTVKVWSLGQS 173 (814)
T ss_dssp TEEEEEEEE-ETTSEEEEEETTCS
T ss_pred CCCCEEEEE-eCCCeEEEEECCCC
Confidence 66655554 55688999998653
No 205
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.11 E-value=6.9e-05 Score=74.33 Aligned_cols=176 Identities=7% Similarity=-0.020 Sum_probs=107.7
Q ss_pred CcceEEEc-cCCCEEEEecCCeEEEEec-CCceEEeeeecC-cCccCeEEcCCCc-EEEEeCCCceE-EEe-CCC-eEEE
Q 022967 78 GPEDVCVD-RNGVLYTATRDGWIKRLHK-NGTWENWKLIGG-DTLLGITTTQENE-ILVCDADKGLL-KVT-EEG-VTVL 150 (289)
Q Consensus 78 ~p~~l~~d-~~g~l~v~~~~g~i~~~~~-~g~~~~~~~~~~-~p~~gl~~d~~g~-l~v~~~~~~i~-~~~-~~g-~~~~ 150 (289)
...++++. |+|+..+...++.|+.++. ++....+....+ ... .+++. ||. |+++.....++ .++ ..+ ...+
T Consensus 297 ~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l 374 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYV-RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF 374 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEE-EECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEE-eeeEc-CCCeEEEEECCCceEEEEECCCCCceEe
Confidence 36788999 9887443233788999984 455444333333 344 67777 775 55544445688 777 445 4443
Q ss_pred EeccCCccccCccceEEcCCCcE-EEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDGSI-YFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l-yv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~gl~~~~d 228 (289)
. . ....+..++++|||+. +++.. .+.|+.+|.++++...+..+ ......++|+||
T Consensus 375 ~-~----~~~~~~~~~~SpDG~~la~~~~------------------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 375 E-E----NLGNVFAMGVDRNGKFAVVAND------------------RFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp C-C----CCCSEEEEEECTTSSEEEEEET------------------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred c-C----CccceeeeEECCCCCEEEEECC------------------CCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 2 1 1134668999999974 44432 35799999988877666533 333478999999
Q ss_pred CCEEEEEeCC---------CCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC-EEEEEe
Q 022967 229 EDYLVVCETF---------KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 229 ~~~l~v~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
|++|.++... ...|+.+|+++.. ...+. ........++...+|. |+++..
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~-~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAAT-TENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECS-CSSSBEEEEEECTTSCEEEEEES
T ss_pred CCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEee-CCCcccCCceEcCCCCEEEEEec
Confidence 9988766432 2478999877532 11111 1112234577788885 555554
No 206
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0013 Score=56.17 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=83.2
Q ss_pred CccCeEEcC--CCcEEEE-eCCCceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccc
Q 022967 118 TLLGITTTQ--ENEILVC-DADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLL 192 (289)
Q Consensus 118 p~~gl~~d~--~g~l~v~-~~~~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~ 192 (289)
.. .+++++ +++++++ .....+..+| .++ ........ .......+++.|||.+.++...
T Consensus 128 v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~pdg~~lasg~~------------- 190 (343)
T 3lrv_A 128 II-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHKDSLLLALYSP------------- 190 (343)
T ss_dssp EE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC---SSCCCCEEEECTTSCEEEEECT-------------
T ss_pred EE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---CCCceEEEEECCCCCEEEEEcC-------------
Confidence 44 888988 8887774 4445577777 556 32221111 1124678999999987776432
Q ss_pred eecCCCEEEEEeCCCCeEE--EeeC-CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCC-cceeeeeccCCCCC--
Q 022967 193 EAKPHGKLLKYDPSLNETS--ILLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESK-EQTEIFVENLPGGP-- 266 (289)
Q Consensus 193 ~~~~~g~i~~~~~~~~~~~--~~~~-~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~p-- 266 (289)
.+.|..+|..+++.. .+.. .......++|+|++.+|..+. . +.|..||+..... ...+.+.. ...+
T Consensus 191 ----dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~~~--~~~~~~ 262 (343)
T 3lrv_A 191 ----DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTYTI--PEFKTG 262 (343)
T ss_dssp ----TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCCBC-------C
T ss_pred ----CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeeccccc--cccccc
Confidence 467888888766543 3333 244567899999999777776 3 4899999865322 11111100 1122
Q ss_pred -CceeeCCCCCEEEEE
Q 022967 267 -DNIKLAPDGSFWIAI 281 (289)
Q Consensus 267 -~~i~~d~~G~lwv~~ 281 (289)
..++++.+|.+.++.
T Consensus 263 ~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAY 278 (343)
T ss_dssp CEEEEECTTSSEEEEE
T ss_pred ceEEEECCCCCEEEEe
Confidence 238888888766663
No 207
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.11 E-value=5.3e-05 Score=66.69 Aligned_cols=179 Identities=14% Similarity=0.076 Sum_probs=100.3
Q ss_pred EccCCCEEEEecCCeEEEEec-C-C-ceEEeee-e-cCcCccCeEEcC--CCcEEEEeCCC----ceEEEeCCC--eEEE
Q 022967 84 VDRNGVLYTATRDGWIKRLHK-N-G-TWENWKL-I-GGDTLLGITTTQ--ENEILVCDADK----GLLKVTEEG--VTVL 150 (289)
Q Consensus 84 ~d~~g~l~v~~~~g~i~~~~~-~-g-~~~~~~~-~-~~~p~~gl~~d~--~g~l~v~~~~~----~i~~~~~~g--~~~~ 150 (289)
.|.++.||+++..| +++++. + | .++.... . ..... .|++|+ .+.||++.... +|++.++.| .+.+
T Consensus 19 ~d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~-~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~ 96 (394)
T 3b7f_A 19 ESGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIH-HIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEA 96 (394)
T ss_dssp CCSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEE-EEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEEC
T ss_pred CCCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceE-EEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceEC
Confidence 45578999999766 777764 3 2 4554321 1 22345 899997 77899986544 688877555 5544
Q ss_pred Eec--cCCc-------cccCccceEEcC---CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC--
Q 022967 151 ASH--VNGS-------RINLADDLIAAT---DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-- 216 (289)
Q Consensus 151 ~~~--~~~~-------~~~~~~~l~~~~---dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-- 216 (289)
... .... .......|++++ ++.||++.. .+.|++.+-.+...+.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------------------~ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------------------PQGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------------------TTEEEEESSTTSBCEECHHHHT
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------------------CCcEEEEcCCCCCeEECcCccC
Confidence 321 1111 112344688886 578999753 26799887655555554210
Q ss_pred ---------------C--CCcceEEEec-CCCEEEEEeCCCCeEEEEEecCCCCcceeeeec--cCC-------CCCCce
Q 022967 217 ---------------L--FFANGVALSK-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--NLP-------GGPDNI 269 (289)
Q Consensus 217 ---------------~--~~p~gl~~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~-------~~p~~i 269 (289)
. .....|+++| +.+.+|++.. ...|++.+-.|.+......-.. .++ .....|
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i 237 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCV 237 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEE
T ss_pred CccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEE
Confidence 0 1123577877 3456888743 2567776433433221110000 011 113457
Q ss_pred eeCCC--CCEEEEEeC
Q 022967 270 KLAPD--GSFWIAILQ 283 (289)
Q Consensus 270 ~~d~~--G~lwv~~~~ 283 (289)
++|.+ +.+|+++..
T Consensus 238 ~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 238 VQHPAAPDILYQQNHC 253 (394)
T ss_dssp EECSSSTTEEEEEETT
T ss_pred EECCCCCCEEEEEcCC
Confidence 78875 789998743
No 208
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.11 E-value=0.00079 Score=59.36 Aligned_cols=187 Identities=10% Similarity=0.100 Sum_probs=104.3
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCc------------eEEeeeec------------CcCccCeEEcCCC--
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT------------WENWKLIG------------GDTLLGITTTQEN-- 128 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~------------~~~~~~~~------------~~p~~gl~~d~~g-- 128 (289)
..-.+++++++|++. ++..+|.|..++ .+++ ...+.... .... .+++.+++
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~l~~~~~~~~ 107 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLPQKNA 107 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC-EEEECCCCSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE-EEEEcCCCCc
Confidence 345678999988866 667889999998 3332 22222222 2344 89999886
Q ss_pred cEEE-EeCCCceEEEe-CCC-eEEEE------------------------------------eccCCccccCccceEEcC
Q 022967 129 EILV-CDADKGLLKVT-EEG-VTVLA------------------------------------SHVNGSRINLADDLIAAT 169 (289)
Q Consensus 129 ~l~v-~~~~~~i~~~~-~~g-~~~~~------------------------------------~~~~~~~~~~~~~l~~~~ 169 (289)
..++ +..+..|..++ .++ ..... .............+++.+
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 4444 44434455555 322 11000 000001112466889999
Q ss_pred CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC-CeEEEe--------eCCCCCcceEEEecCC-CEEEEEeCCC
Q 022967 170 DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NETSIL--------LDSLFFANGVALSKDE-DYLVVCETFK 239 (289)
Q Consensus 170 dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~~~~~~--------~~~~~~p~gl~~~~d~-~~l~v~~~~~ 239 (289)
+|.++++. . .+.|..+|.+. ++.... .........++|+|++ +.|+.+ ...
T Consensus 188 ~~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d 248 (447)
T 3dw8_B 188 DYETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS-SSK 248 (447)
T ss_dssp TSSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE-ETT
T ss_pred CCCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE-eCC
Confidence 99877764 2 36788888762 222211 1223345788999998 644444 556
Q ss_pred CeEEEEEecCCCCcc--eeeeeccCC-----------CCCCceeeCCCCCEEEEEeC
Q 022967 240 FRCLKYWLKGESKEQ--TEIFVENLP-----------GGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 240 ~~i~~~~~~~~~~~~--~~~~~~~~~-----------~~p~~i~~d~~G~lwv~~~~ 283 (289)
+.|..||+....... ...+..... +....++...+|.+.++...
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 889999986543211 122221110 13556888889887776544
No 209
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.10 E-value=0.00013 Score=61.87 Aligned_cols=137 Identities=14% Similarity=0.252 Sum_probs=88.9
Q ss_pred EEEccCCCEEEEe--cCCeEEEEecCCc-eEEeeeecCcCccCeEEcCCCcEEEEeCC--------------CceEEEeC
Q 022967 82 VCVDRNGVLYTAT--RDGWIKRLHKNGT-WENWKLIGGDTLLGITTTQENEILVCDAD--------------KGLLKVTE 144 (289)
Q Consensus 82 l~~d~~g~l~v~~--~~g~i~~~~~~g~-~~~~~~~~~~p~~gl~~d~~g~l~v~~~~--------------~~i~~~~~ 144 (289)
++.+ ++.||+.. .+++|++++.+|. .+.+.. ..+. .|..+ ++.||.+... ..|++++.
T Consensus 21 ~~~~-g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~--~~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCES-DGEVFFSNTNDNGRLYAMNIDGSNIHKLSN--DTAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEE-TTEEEEEEGGGTTEEEEEETTSCSCEEEEE--EEEE-EEEEC-SSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEe-CCEEEEEeCCCCceEEEEcCCCCCCEEccC--Ccee-eEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 3443 77899876 4688999998884 333333 2233 56554 3468777532 35888885
Q ss_pred CC--eEEEEeccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcc
Q 022967 145 EG--VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (289)
Q Consensus 145 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~ 221 (289)
+| .+.+... .+..+.++| .||+++.. ......|++++.++...+.+.....
T Consensus 96 dg~~~~~l~~~---------~~~~~s~~g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~~~~--- 149 (302)
T 3s25_A 96 NGHGSTVLDPD---------PCIYASLIGNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKNHYL--- 149 (302)
T ss_dssp TSCCCEEEECS---------CEEEEEEETTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEESSCC---
T ss_pred CCCcceEeecC---------CccEEEEeCCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeCCCc---
Confidence 55 4444331 122455554 79998710 0023579999999777666654422
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
.+++++++.||+++.+..+|++.+++|.
T Consensus 150 -~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 150 -FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp -CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred -eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 4568889999999988889999998874
No 210
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.00065 Score=58.13 Aligned_cols=149 Identities=8% Similarity=-0.021 Sum_probs=92.5
Q ss_pred CcceEEEcc--CCCEE-EEecCCeEEEEe-cCCceEEee-eecC-cCccCeEEcCCCcEEEEe-CCCceEEEe-CCC--e
Q 022967 78 GPEDVCVDR--NGVLY-TATRDGWIKRLH-KNGTWENWK-LIGG-DTLLGITTTQENEILVCD-ADKGLLKVT-EEG--V 147 (289)
Q Consensus 78 ~p~~l~~d~--~g~l~-v~~~~g~i~~~~-~~g~~~~~~-~~~~-~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g--~ 147 (289)
...++++.+ +|+++ ++..+|.|..++ .+++..... .... ... .++++++|.++++. ....|..+| .++ .
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~-~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYS-SGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCC-EEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceE-EEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 356788888 88877 466889999999 455543322 2222 344 89999999877764 335577777 555 3
Q ss_pred -EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC---CCCc---
Q 022967 148 -TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---LFFA--- 220 (289)
Q Consensus 148 -~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~---~~~p--- 220 (289)
..+.. ........+++.|+|...++... +.|..+|..+++....... ...+
T Consensus 206 ~~~~~~----~h~~~v~~l~fs~~g~~l~s~~~------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 206 SSRFPV----DEEAKIKEVKFADNGYWMVVECD------------------QTVVCFDLRKDVGTLAYPTYTIPEFKTGT 263 (343)
T ss_dssp CEECCC----CTTSCEEEEEECTTSSEEEEEES------------------SBEEEEETTSSTTCBSSCCCBC-----CC
T ss_pred ccEEec----cCCCCEEEEEEeCCCCEEEEEeC------------------CeEEEEEcCCCCcceeecccccccccccc
Confidence 33321 01135678999999986666432 3677778765432111111 1122
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 221 NGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 221 ~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
..++|+|++++|.++..+.+.|..|+.+.
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 24999999997777655468888888854
No 211
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.07 E-value=0.00049 Score=63.24 Aligned_cols=185 Identities=11% Similarity=0.001 Sum_probs=105.3
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cCC----c-eEEeeeecCc-CccCeEEcC--CCcEEEEe-CCCceEEEe-CC
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNG----T-WENWKLIGGD-TLLGITTTQ--ENEILVCD-ADKGLLKVT-EE 145 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g----~-~~~~~~~~~~-p~~gl~~d~--~g~l~v~~-~~~~i~~~~-~~ 145 (289)
..+.++++.++|++.+...++.|..++ .++ + ...+...... .. .+++.+ +|+++++. ....+..++ .+
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 457789999999877444478899998 445 3 3333333334 45 899999 99866654 333454455 21
Q ss_pred C------eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCC
Q 022967 146 G------VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFF 219 (289)
Q Consensus 146 g------~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~ 219 (289)
+ .......... .......+++.|+|...++.... ....+.|+.+|. +.....+......
T Consensus 98 ~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~-------------~~~~~~v~~~d~-~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEG-------------RDNFGVFISWDS-GNSLGEVSGHSQR 162 (615)
T ss_dssp EGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECC-------------SSCSEEEEETTT-CCEEEECCSCSSC
T ss_pred Ccccccccccccchhhc-ccccEEEEEEeCCCCEEEEeccC-------------CCCccEEEEEEC-CCcceeeecCCcc
Confidence 1 0111111111 11346789999999765553320 011256777773 2334444444455
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCC---CCCceeeCCC-CCEEEE
Q 022967 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPG---GPDNIKLAPD-GSFWIA 280 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~p~~i~~d~~-G~lwv~ 280 (289)
...++|+|+++.++++....+.|..||...... ...+. .... ....+++.++ |++.++
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~--~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF--SASDR-THHKQGSFVRDVEFSPDSGEFVIT 224 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEE--EEEEC-SSSCTTCCEEEEEECSTTCCEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce--eeeec-ccCCCCceEEEEEECCCCCCEEEE
Confidence 678999999985555556678899998654211 11121 1222 3456777777 765444
No 212
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.07 E-value=0.001 Score=58.57 Aligned_cols=155 Identities=8% Similarity=0.031 Sum_probs=91.2
Q ss_pred cCCcceEEEccCCCEEEEecCCeEEEEecC--CceEEee--------eecCcCccCeEEcCCC-cEEEEe-CCCceEEEe
Q 022967 76 LNGPEDVCVDRNGVLYTATRDGWIKRLHKN--GTWENWK--------LIGGDTLLGITTTQEN-EILVCD-ADKGLLKVT 143 (289)
Q Consensus 76 ~~~p~~l~~d~~g~l~v~~~~g~i~~~~~~--g~~~~~~--------~~~~~p~~gl~~d~~g-~l~v~~-~~~~i~~~~ 143 (289)
-....++++.++|+++++..++.|..++.+ ++..... ....... .++++++| +++++. ....|..+|
T Consensus 177 ~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd 255 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT-AAEFHPNSCNTFVYSSSKGTIRLCD 255 (447)
T ss_dssp SSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE-EEEECSSCTTEEEEEETTSCEEEEE
T ss_pred CcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceE-EEEECCCCCcEEEEEeCCCeEEEEE
Confidence 345678999999987754478999999843 2222111 1122344 89999988 665554 334577777
Q ss_pred -CCC-e-----EEEEeccCCcc-------ccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC-C
Q 022967 144 -EEG-V-----TVLASHVNGSR-------INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-N 208 (289)
Q Consensus 144 -~~g-~-----~~~~~~~~~~~-------~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~ 208 (289)
..+ . ..+........ ......+++.|+|.+.++.. . +.|..+|... +
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-----------------~-~~v~iwd~~~~~ 317 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-----------------Y-LSVKVWDLNMEN 317 (447)
T ss_dssp TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-----------------S-SEEEEEETTCCS
T ss_pred CcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-----------------C-CeEEEEeCCCCc
Confidence 444 3 22211110000 01467899999998776532 2 5677788764 3
Q ss_pred eEEEeeCCCCC----------------cceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 209 ETSILLDSLFF----------------ANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 209 ~~~~~~~~~~~----------------p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+......+... ...++|+|++++| ++-...+.|..||+.+.
T Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 318 RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTC
T ss_pred cccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCC
Confidence 32111111111 1238999999966 55466789999998654
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.06 E-value=0.00046 Score=59.83 Aligned_cols=184 Identities=12% Similarity=0.013 Sum_probs=107.0
Q ss_pred CCcceEEEccC----C---CEE-EEecCCeEEEEe-cCCc------eEEeeee-----cCcCccCeEEc----CCCcE-E
Q 022967 77 NGPEDVCVDRN----G---VLY-TATRDGWIKRLH-KNGT------WENWKLI-----GGDTLLGITTT----QENEI-L 131 (289)
Q Consensus 77 ~~p~~l~~d~~----g---~l~-v~~~~g~i~~~~-~~g~------~~~~~~~-----~~~p~~gl~~d----~~g~l-~ 131 (289)
....++++.++ | ++. ++..++.|..++ .+++ ...+... ..... .+++. +++.. +
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEE
Confidence 34567888888 7 554 667889899988 3343 3433332 13445 89998 88875 5
Q ss_pred EE-eCCCceEEEe-CC------C--eE-----EEEec--cCCccccCccceEEcCCCcEEEeeCCCccCcccccccccee
Q 022967 132 VC-DADKGLLKVT-EE------G--VT-----VLASH--VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEA 194 (289)
Q Consensus 132 v~-~~~~~i~~~~-~~------g--~~-----~~~~~--~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~ 194 (289)
++ .....+..++ .. + +. .+... ........+..+++.++| ++++..
T Consensus 142 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~---------------- 204 (397)
T 1sq9_A 142 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF---------------- 204 (397)
T ss_dssp EEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC----------------
T ss_pred EEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe----------------
Confidence 54 4445566666 44 3 33 33210 001112356789999999 555433
Q ss_pred cCCCEEEEEeCCCCeEEEeeCC-------CCCcceEEEecCCCEEEEEeCCC---CeEEEEEecCCCCcceeeeecc---
Q 022967 195 KPHGKLLKYDPSLNETSILLDS-------LFFANGVALSKDEDYLVVCETFK---FRCLKYWLKGESKEQTEIFVEN--- 261 (289)
Q Consensus 195 ~~~g~i~~~~~~~~~~~~~~~~-------~~~p~gl~~~~d~~~l~v~~~~~---~~i~~~~~~~~~~~~~~~~~~~--- 261 (289)
..+.|..+|..+++....... ......++|+|+++.|+++. .. +.|..||+..... ...+...
T Consensus 205 -~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~~~--~~~~~~~~~~ 280 (397)
T 1sq9_A 205 -NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSFGCITLYETEFGER--IGSLSVPTHS 280 (397)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTEEEEEEEETTTCCE--EEEECBC---
T ss_pred -CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCCceEEEEECCCCcc--cceeccCccc
Confidence 247788899876665443333 45567899999999766664 34 6899998764321 1112110
Q ss_pred ---------CCCCCCceeeCCCCCEEEEEe
Q 022967 262 ---------LPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 262 ---------~~~~p~~i~~d~~G~lwv~~~ 282 (289)
.......++...+|.+.++..
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 223445678888886655543
No 214
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.06 E-value=4.7e-05 Score=65.87 Aligned_cols=150 Identities=5% Similarity=-0.069 Sum_probs=85.1
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceEE---eeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCCe--E
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN---WKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEGV--T 148 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~---~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g~--~ 148 (289)
.-.++++.++|++. ++..++.|..++ .++.... +........ .+++.++|+++++ ..+..+..++ .++. .
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 35678999988866 445788888888 3442222 222223344 8999988875554 4434566666 3321 1
Q ss_pred EEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe----EEEeeC-CCCCcceE
Q 022967 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE----TSILLD-SLFFANGV 223 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~~~~-~~~~p~gl 223 (289)
.... ..+ .......+++.|+|.+.++... .+.|..+|.++++ ...+.. .......+
T Consensus 92 ~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 92 QTLV-LLR-LNRAATFVRWSPNEDKFAVGSG-----------------ARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp CEEE-CCC-CSSCEEEEECCTTSSCCEEEES-----------------SSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred eeeE-ecc-cCCceEEEEECCCCCEEEEEec-----------------CCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 1111 111 1124678899999875544321 3557777766544 233333 34456789
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEec
Q 022967 224 ALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
+|+|+++.|+.+. ..+.|..||+.
T Consensus 153 ~~~~~~~~l~~~~-~d~~i~iwd~~ 176 (377)
T 3dwl_C 153 DWHPNNVLLAAGC-ADRKAYVLSAY 176 (377)
T ss_dssp EECTTSSEEEEEE-SSSCEEEEEEC
T ss_pred EEcCCCCEEEEEe-CCCEEEEEEEE
Confidence 9999999666654 45789999985
No 215
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.0011 Score=56.72 Aligned_cols=181 Identities=12% Similarity=0.141 Sum_probs=97.2
Q ss_pred CcceEEEccC--CCEE-EEecCCeEEEEe-cCCceEEee---eecCcCccCeEEcCC--CcEEEE-eCCCceEEEe-CCC
Q 022967 78 GPEDVCVDRN--GVLY-TATRDGWIKRLH-KNGTWENWK---LIGGDTLLGITTTQE--NEILVC-DADKGLLKVT-EEG 146 (289)
Q Consensus 78 ~p~~l~~d~~--g~l~-v~~~~g~i~~~~-~~g~~~~~~---~~~~~p~~gl~~d~~--g~l~v~-~~~~~i~~~~-~~g 146 (289)
...++++.++ +++. ++..+|.|..++ .+++..... ....... .+++.++ +.++++ .....+..++ ..+
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 3456777654 6655 667889999998 455422221 2223344 8899887 765554 4445566666 333
Q ss_pred --eEEEEeccCCccccCccceEEcC-------------CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe--
Q 022967 147 --VTVLASHVNGSRINLADDLIAAT-------------DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-- 209 (289)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~l~~~~-------------dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~-- 209 (289)
......... ......+++.| ++.++++... .+.|..+|..++.
T Consensus 136 ~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 136 GTTSPIIIDAH---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQT 195 (379)
T ss_dssp SCCCEEEEECC---TTCEEEEEECCCC----------CTTCEEEEEET-----------------TSCEEEEEEETTTTE
T ss_pred CceeeEEecCC---CCceEEEEEcCccccccccccCCCCCCEEEEEeC-----------------CCeEEEEEecCCCcc
Confidence 222211111 12456788888 5765555322 3556666544332
Q ss_pred EE---EeeCCCCCcceEEEecC---CCEEEEEeCCCCeEEEEEecCCCCcceeeeecc--CCCCCCceeeCCCCCEEEE
Q 022967 210 TS---ILLDSLFFANGVALSKD---EDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIA 280 (289)
Q Consensus 210 ~~---~~~~~~~~p~gl~~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwv~ 280 (289)
.. .+.........++|+|+ ++.|+.+ ...+.|..|++.............. .......++...+|.+.++
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASV-SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCCeEEEE-eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEE
Confidence 11 12222344578999999 6655555 4568899999875421111111111 2233445677777754433
No 216
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.06 E-value=0.00057 Score=62.83 Aligned_cols=179 Identities=12% Similarity=0.079 Sum_probs=104.3
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeC-CCceEEEe-CCC-eEEEEec
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDA-DKGLLKVT-EEG-VTVLASH 153 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~-~~~i~~~~-~~g-~~~~~~~ 153 (289)
.|..+++.++|.+.+...++.+..++ .+++..........+. .+++. ...|+++.. ...+..++ .++ ... ..
T Consensus 408 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~l~~~~~~d~~i~~~~~~~~~~~~--~~ 483 (615)
T 1pgu_A 408 QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS-AVSLS-QNYVAVGLEEGNTIQVFKLSDLEVSF--DL 483 (615)
T ss_dssp CEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE-EEEEC-SSEEEEEETTTSCEEEEETTEEEEEE--EC
T ss_pred CceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCce-EEEEc-CCEEEEeecCCCeEEEEECCCccccc--cc
Confidence 45666666666666554566666666 3554333223334455 78887 334555554 45577777 444 321 11
Q ss_pred cCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC--CCCCcceEEEec----
Q 022967 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--SLFFANGVALSK---- 227 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~--~~~~p~gl~~~~---- 227 (289)
..+ ....+..+++.|+|.+.++... .+.|..+|.++++...... .......++|+|
T Consensus 484 ~~~-~~~~v~~~~~s~~g~~l~~~~~-----------------dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 484 KTP-LRAKPSYISISPSETYIAAGDV-----------------MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG 545 (615)
T ss_dssp SSC-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred cCC-ccCceEEEEECCCCCEEEEcCC-----------------CCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccc
Confidence 111 1235678999999986665432 3678888987776544333 334567899999
Q ss_pred ------CCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 228 ------DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 228 ------d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
+++.|..+ ...+.|..|++.... .....+ .........+++..+|.|..+.
T Consensus 546 ~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~-~~~~~~-~~h~~~v~~l~~s~~~~l~s~~ 602 (615)
T 1pgu_A 546 ANEEEIEEDLVATG-SLDTNIFIYSVKRPM-KIIKAL-NAHKDGVNNLLWETPSTLVSSG 602 (615)
T ss_dssp ----CCSCCEEEEE-ETTSCEEEEESSCTT-CCEEET-TSSTTCEEEEEEEETTEEEEEE
T ss_pred ccccccCCCEEEEE-cCCCcEEEEECCCCc-eechhh-hcCccceEEEEEcCCCCeEEec
Confidence 99966666 445789999987531 111111 1222345567777777733333
No 217
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.05 E-value=0.00036 Score=60.45 Aligned_cols=180 Identities=11% Similarity=0.022 Sum_probs=100.9
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEecCCceE-EeeeecCcCccCeEEcCCCc-EEEEe-CCCceEEEe-CC----C--e
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLHKNGTWE-NWKLIGGDTLLGITTTQENE-ILVCD-ADKGLLKVT-EE----G--V 147 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~~-~~~~~~~~p~~gl~~d~~g~-l~v~~-~~~~i~~~~-~~----g--~ 147 (289)
..++++.+++.+. ++..++.|..++.+++.. .+........ .+++.+++. ++++. ....+..++ .+ + +
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVT-HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEE-EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEE-EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 4567888877755 666888999998655433 3333334455 899999987 55554 334566666 43 3 2
Q ss_pred EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE-EEeeC------CCCC
Q 022967 148 TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-SILLD------SLFF 219 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~~------~~~~ 219 (289)
..+ . . ......+++.| +|.+.++... .+.|..+|.++++. ..+.. ....
T Consensus 245 ~~~-~-~----~~~v~~~~~s~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 245 AEM-P-H----EKPVNAAYFNPTDSTKLLTTDQ-----------------RNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp EEE-E-C----SSCEEEEEECTTTSCEEEEEES-----------------SSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred EEe-c-C----CCceEEEEEcCCCCCEEEEEcC-----------------CCcEEEEECCCCcccccccccccccccccc
Confidence 222 1 1 13567899999 9976665432 36788888765432 11110 0111
Q ss_pred cceEEEecCCCEEEE--------EeCCCCeEEEEEecCCCCcceeeeec-cCCCCCCceeeCCCCCEEEEEeCc
Q 022967 220 ANGVALSKDEDYLVV--------CETFKFRCLKYWLKGESKEQTEIFVE-NLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 220 p~gl~~~~d~~~l~v--------~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
+....|+|++..+.+ +....+.|..||+..... ...+.. ...+....+++..+|.+.++..++
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~--~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~ 373 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGL--VHQLRDPNAAGIISLNKFSPTGDVLASGMGF 373 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCE--EEEECBTTBCSCCCEEEECTTSSEEEEEETT
T ss_pred ceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCce--eeeecCCCCCceEEEEEEecCccEEEEecCC
Confidence 222344444443333 223567899999764322 122221 112344556888999877666543
No 218
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.05 E-value=0.001 Score=61.89 Aligned_cols=171 Identities=9% Similarity=0.076 Sum_probs=94.4
Q ss_pred CcceEEEccCCC--EEEEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEE
Q 022967 78 GPEDVCVDRNGV--LYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTV 149 (289)
Q Consensus 78 ~p~~l~~d~~g~--l~v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~ 149 (289)
...++++.|++. |..+..++.|..++ ..++... +........ .++|.++|+++++... ..+..++ .+| ...
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~-~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH-SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceE-EEEECCCCCEEEEEECCCcEEEEECCCCcEeee
Confidence 346788888775 55677889999998 4444332 222233445 8999999987776443 4566677 566 333
Q ss_pred EEec-cCC-ccccCccceEEcCCCcEEEeeCCC-ccCccccc-------------------------cccceecCCCEEE
Q 022967 150 LASH-VNG-SRINLADDLIAATDGSIYFSVAST-KFGLHNWG-------------------------LDLLEAKPHGKLL 201 (289)
Q Consensus 150 ~~~~-~~~-~~~~~~~~l~~~~dG~lyv~~~~~-~~~~~~~~-------------------------~~~~~~~~~g~i~ 201 (289)
+... ... .-...+.++++.|||...++...- ...+.+.. ..++.....+.+.
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~ 307 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 307 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEE
T ss_pred eccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEE
Confidence 3110 000 011246788999999866654321 00000000 0011111233344
Q ss_pred EEeCCCCeEEEeeC-CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 202 KYDPSLNETSILLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 202 ~~~~~~~~~~~~~~-~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
.+++++++...... .......++++||++.|+.+. ..+.|..||+...
T Consensus 308 ~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 308 FVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD-AEGHINSWDISTG 356 (611)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC
T ss_pred EEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCC
Confidence 45554443322222 233456789999999776664 4588999987643
No 219
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.04 E-value=0.00037 Score=65.20 Aligned_cols=155 Identities=11% Similarity=-0.020 Sum_probs=92.6
Q ss_pred cceEEEccCCC-EEEEecC----------CeEEEEecC-------CceEEee-eecCcCccCeEEcCCCc-EEEEeCC--
Q 022967 79 PEDVCVDRNGV-LYTATRD----------GWIKRLHKN-------GTWENWK-LIGGDTLLGITTTQENE-ILVCDAD-- 136 (289)
Q Consensus 79 p~~l~~d~~g~-l~v~~~~----------g~i~~~~~~-------g~~~~~~-~~~~~p~~gl~~d~~g~-l~v~~~~-- 136 (289)
..++++.+||+ |++...+ ..|++++.+ |+...+. ....... ++++.+||+ |+++...
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~SpDG~~la~~~~~~~ 210 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVT-GPRLSPDGRQAVWLAWDHP 210 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEEC-CCEECTTSSEEEEEEECTT
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCccc-CceECCCCCEEEEEECCCC
Confidence 45678899887 4444433 478888844 4555444 3334456 889999996 5444322
Q ss_pred ------CceEEEe-C-CC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC
Q 022967 137 ------KGLLKVT-E-EG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (289)
Q Consensus 137 ------~~i~~~~-~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 207 (289)
..|+.++ . +| .........+ .......+.+.|||++|++... .....|+++|.++
T Consensus 211 ~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~~~~~---------------~~~~~l~~~~~~~ 274 (662)
T 3azo_A 211 RMPWEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIVATDR---------------TGWWNLHRVDPAT 274 (662)
T ss_dssp CCTTTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEEEECT---------------TSSCEEEEECTTT
T ss_pred CCCCCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEEEECC---------------CCCeEEEEEECCC
Confidence 2478888 5 45 2221111110 0124567899999998876532 1123799999877
Q ss_pred CeEEEeeCCCCC---------cceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 208 NETSILLDSLFF---------ANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 208 ~~~~~~~~~~~~---------p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
++.+.+...... ...++++++++.++.+..+..+|++++.++.
T Consensus 275 ~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT
T ss_pred CceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCC
Confidence 776655332111 3467888888866665444556777776643
No 220
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.04 E-value=0.00026 Score=59.97 Aligned_cols=179 Identities=13% Similarity=0.021 Sum_probs=101.1
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCc----eEEeeeecCcCccCeEEcCCCc-EE-EEeCCCceEEEeC-CC-
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT----WENWKLIGGDTLLGITTTQENE-IL-VCDADKGLLKVTE-EG- 146 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~----~~~~~~~~~~p~~gl~~d~~g~-l~-v~~~~~~i~~~~~-~g- 146 (289)
....++++.++|.+. ++..++.|..++ ..+. ............ .+++.++++ ++ .+.....|..++- +.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 445678888887754 777889999998 4444 333333333445 899988888 44 4454455777774 44
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC---------CeEEEeeCC
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL---------NETSILLDS 216 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~~~~~~~ 216 (289)
...+... ........+++.+ +.++++... .+.|..+|.++ ++.......
T Consensus 91 ~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 91 SFQALTNN---EANLGICRICKYG-DDKLIAASW-----------------DGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SEEECBSC---CCCSCEEEEEEET-TTEEEEEET-----------------TSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred ceEecccc---CCCCceEEEEeCC-CCEEEEEcC-----------------CCeEEEEcccccccccccccCCeeeEEee
Confidence 4322110 0112456888988 765555332 36677777543 221111122
Q ss_pred CCCcceEEEecCCCEEEEEeCCCCeEEEEEecC-CCCcceeeeeccCCCCCCceeeCC-CCCEEEEE
Q 022967 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAI 281 (289)
Q Consensus 217 ~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~p~~i~~d~-~G~lwv~~ 281 (289)
......+++++++ ++++ ...+.|..|++.. ...... ............++..+ +|.+++..
T Consensus 150 ~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 150 KNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGT-IEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp CCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCE-EEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred CCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccce-eeecCCCCceeEEEECCCCCCEEEEE
Confidence 3345678888776 5555 4558899999875 322111 11112223456677777 66554443
No 221
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.00035 Score=58.28 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=93.3
Q ss_pred cceEEEcc-CCCEE-EEecCCeEEEEecCCceEEeee-ecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEEe
Q 022967 79 PEDVCVDR-NGVLY-TATRDGWIKRLHKNGTWENWKL-IGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLAS 152 (289)
Q Consensus 79 p~~l~~d~-~g~l~-v~~~~g~i~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~~ 152 (289)
...+.+.+ +++.+ ++..++.|..++.......+.. ...... .+++.+++.++++.....+..++ .++ +..+..
T Consensus 145 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 145 VWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVR-HLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEE-EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEE-EEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc
Confidence 44566655 55544 6678888888883333333333 223344 88898888876666656677788 555 333321
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEEecCCCE
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDY 231 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d~~~ 231 (289)
. ......+++.++|.|+.+.. .+.|..+|..+++..... ........++++++++
T Consensus 224 ~-----~~~i~~~~~~~~~~l~~~~~------------------dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~- 279 (313)
T 3odt_A 224 H-----ESFVYCIKLLPNGDIVSCGE------------------DRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD- 279 (313)
T ss_dssp C-----SSCEEEEEECTTSCEEEEET------------------TSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-
T ss_pred C-----CceEEEEEEecCCCEEEEec------------------CCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-
Confidence 1 12467899999997665543 378888998766654333 3333557899999998
Q ss_pred EEEEeCCCCeEEEEEecCC
Q 022967 232 LVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~ 250 (289)
++++ ...+.|..|++...
T Consensus 280 ~~~~-~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 280 IIVG-SSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEE-ETTSCEEEEESCGG
T ss_pred EEEE-eCCCcEEEEeCCCC
Confidence 4444 45688999998654
No 222
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.03 E-value=0.00023 Score=66.69 Aligned_cols=195 Identities=14% Similarity=0.038 Sum_probs=102.1
Q ss_pred CcceEEEccCCCEEEEe--c-CC--eEEEEecCCceEEeeeecCcCcc---------CeEEc--CCCc--EEEEeC-CCc
Q 022967 78 GPEDVCVDRNGVLYTAT--R-DG--WIKRLHKNGTWENWKLIGGDTLL---------GITTT--QENE--ILVCDA-DKG 138 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~--~-~g--~i~~~~~~g~~~~~~~~~~~p~~---------gl~~d--~~g~--l~v~~~-~~~ 138 (289)
....+++++++..|+.. . ++ .|+....+|....+.... .... ..++. +||+ |+++.. ...
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~ 103 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQR 103 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEECCCCe
Confidence 45566777665555554 1 33 344443455544443211 1110 23343 6775 455543 356
Q ss_pred eEEEeCC----C-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCC-----
Q 022967 139 LLKVTEE----G-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL----- 207 (289)
Q Consensus 139 i~~~~~~----g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~----- 207 (289)
|+.++.+ + ...+.............+++++|||+ |+++..... ..........|+.+|.++
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT--------GEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC--------SSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc--------CCCCCCceeEEEEEECCCCcccc
Confidence 8888843 6 55543211000112356889999996 555432100 000001224799999987
Q ss_pred -CeEEEee-CCCCCcceEEEecCCCEEEEEeCCC-------CeEEEEEecC-CCCcceeeeeccCCCCCCceeeCCCCCE
Q 022967 208 -NETSILL-DSLFFANGVALSKDEDYLVVCETFK-------FRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (289)
Q Consensus 208 -~~~~~~~-~~~~~p~gl~~~~d~~~l~v~~~~~-------~~i~~~~~~~-~~~~~~~~~~~~~~~~p~~i~~d~~G~l 277 (289)
++.+.+. .+......++|+|||++|+++.... ..|+.+++++ ........+..........++...||.+
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 6766665 5555567789999999888765332 5799999873 3222222222221223344555566655
Q ss_pred EEEE
Q 022967 278 WIAI 281 (289)
Q Consensus 278 wv~~ 281 (289)
++..
T Consensus 256 ~~~~ 259 (662)
T 3azo_A 256 IVAT 259 (662)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 223
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.01 E-value=0.0021 Score=56.87 Aligned_cols=184 Identities=10% Similarity=-0.001 Sum_probs=110.6
Q ss_pred CCcceEEEccCCC--EEEEecCCeEEEEec-CCc--------eEEeeeecCcCccCeEEcC-CCcEEEEeCC-CceEEEe
Q 022967 77 NGPEDVCVDRNGV--LYTATRDGWIKRLHK-NGT--------WENWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVT 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~--l~v~~~~g~i~~~~~-~g~--------~~~~~~~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~ 143 (289)
....++++.+++. |+++..+|.|..++. .+. ...+........ .+++.+ ++.++++... ..|..++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 3467899998766 446778899999993 211 112222223345 889987 5566665433 4566677
Q ss_pred -CCC-----eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCC-Ce-EEEee
Q 022967 144 -EEG-----VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NE-TSILL 214 (289)
Q Consensus 144 -~~g-----~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~~-~~~~~ 214 (289)
..+ ...+.. . ...++.+++.|++. ++++... .+.|..+|.+. +. ...+.
T Consensus 261 ~~~~~~~~~~~~~~~-~----~~~v~~i~~~p~~~~~l~tg~~-----------------dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDA-H----TAEVNCLSFNPYSEFILATGSA-----------------DKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp TTCSCSSSCSEEEEC-C----SSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCCCcceeEeec-C----CCCeEEEEeCCCCCCEEEEEeC-----------------CCeEEEEeCCCCCCCeEEee
Confidence 322 222211 1 13467899999885 6655432 46788888764 22 33343
Q ss_pred CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcc----------eeeee-ccCCCCCCceeeCCCCC-EEEEEe
Q 022967 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ----------TEIFV-ENLPGGPDNIKLAPDGS-FWIAIL 282 (289)
Q Consensus 215 ~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~----------~~~~~-~~~~~~p~~i~~d~~G~-lwv~~~ 282 (289)
........++|+|+++.++++....++|..|++....... ...+. ......+..+....+|. +.++..
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 3445567899999998778877777899999986421100 11111 11223467788888887 665554
Q ss_pred C
Q 022967 283 Q 283 (289)
Q Consensus 283 ~ 283 (289)
.
T Consensus 399 ~ 399 (430)
T 2xyi_A 399 E 399 (430)
T ss_dssp T
T ss_pred C
Confidence 3
No 224
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.01 E-value=0.00075 Score=58.08 Aligned_cols=176 Identities=11% Similarity=0.111 Sum_probs=96.6
Q ss_pred ccCCCEEEEe-cCCeEEEEecCCceEEeeeecCcCccCeEEcC----CC----cEEEEeCC---Cce--EEEe-CCC-eE
Q 022967 85 DRNGVLYTAT-RDGWIKRLHKNGTWENWKLIGGDTLLGITTTQ----EN----EILVCDAD---KGL--LKVT-EEG-VT 148 (289)
Q Consensus 85 d~~g~l~v~~-~~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~----~g----~l~v~~~~---~~i--~~~~-~~g-~~ 148 (289)
|+...+++++ ..++++.++.+|+...... .++++ ++.+-+ .| .+++++.. +.| +.+| ..+ ++
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~-~g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYN-TGKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEEC-CSCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEcc-CCCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 3455666554 5678999998887655433 25555 554432 12 24666654 334 5556 445 55
Q ss_pred EEEecc-C-CccccCccceEE--cCC-Cc--EEEeeCCCccCccccccccceecCCCEEEEEeC---CCCeE--EEe--e
Q 022967 149 VLASHV-N-GSRINLADDLIA--ATD-GS--IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP---SLNET--SIL--L 214 (289)
Q Consensus 149 ~~~~~~-~-~~~~~~~~~l~~--~~d-G~--lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~---~~~~~--~~~--~ 214 (289)
.+.... + +.....+++++. +++ |. +|+++. .|.+..|.. ..+.. +.+ .
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k------------------~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK------------------EGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS------------------SSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC------------------CCeEEEEEEEeCCCCcccceEEEEe
Confidence 442210 1 123467899998 774 55 555543 244444322 22211 111 1
Q ss_pred CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcc-eee-ee--ccCCCCCCceeeC--CCC--CEEEEE
Q 022967 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ-TEI-FV--ENLPGGPDNIKLA--PDG--SFWIAI 281 (289)
Q Consensus 215 ~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~-~~--~~~~~~p~~i~~d--~~G--~lwv~~ 281 (289)
.....+-|++.++..++||+++-. ..|++|+.+...-.. ... .+ ..+..-+.||+++ .+| .|++++
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred cCCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 223468899999989999999987 679999965332111 111 11 1222357888884 443 455555
No 225
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.00 E-value=0.0024 Score=54.32 Aligned_cols=202 Identities=14% Similarity=0.079 Sum_probs=107.6
Q ss_pred CcceEEEccC----CC-EEEEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcC-CCcEEEE-eCCCceEEEe-CCC-
Q 022967 78 GPEDVCVDRN----GV-LYTATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQ-ENEILVC-DADKGLLKVT-EEG- 146 (289)
Q Consensus 78 ~p~~l~~d~~----g~-l~v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~-~g~l~v~-~~~~~i~~~~-~~g- 146 (289)
...++++.++ |. |+++..+|.|..++ .+++...... ...... .+++.+ +++++++ .....|..++ .++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 3566788777 44 44777899999999 4555433322 333445 899988 7776555 4445577778 556
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCC-CccCcccc-------------------------------------
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVAS-TKFGLHNW------------------------------------- 187 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~-~~~~~~~~------------------------------------- 187 (289)
...+.. ..+ ....+..+++.++|...++... ......+.
T Consensus 150 ~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 150 LVAIFGG-VEG-HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp EEEEECS-TTS-CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred EEEEecc-ccc-ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 333311 011 1124567788887764443321 11100000
Q ss_pred -------------ccccceecCCCEEEEEeCCCCe---------------EEEeeCCCCCcceEEEecC--CCEEEEEeC
Q 022967 188 -------------GLDLLEAKPHGKLLKYDPSLNE---------------TSILLDSLFFANGVALSKD--EDYLVVCET 237 (289)
Q Consensus 188 -------------~~~~~~~~~~g~i~~~~~~~~~---------------~~~~~~~~~~p~gl~~~~d--~~~l~v~~~ 237 (289)
...++.....+.|..+|..++. ...+.........++++++ ++.|+.+ .
T Consensus 228 ~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~-~ 306 (366)
T 3k26_A 228 DIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG-N 306 (366)
T ss_dssp SSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE-C
T ss_pred cCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE-e
Confidence 0001122234555556544321 1111222233566788888 8866655 5
Q ss_pred CCCeEEEEEecCCCCcc--eeeeecc-CCCCCCceeeCCCCCEEEEEeC
Q 022967 238 FKFRCLKYWLKGESKEQ--TEIFVEN-LPGGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 238 ~~~~i~~~~~~~~~~~~--~~~~~~~-~~~~p~~i~~d~~G~lwv~~~~ 283 (289)
..+.|..|++....... ...+... .......++...+|++.++...
T Consensus 307 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 307 QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 56889999987543221 1122211 0234566888888876665543
No 226
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.00053 Score=66.99 Aligned_cols=149 Identities=13% Similarity=0.055 Sum_probs=93.0
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEecCCceEEeeeecCcCccCeEEcCCCc-EEEEeCCCceEEEe-CCC--eEEEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g--~~~~~ 151 (289)
....+++++++|++. ++..+|.|..|+..+...........++..++|.+ |+ |..+..++.|..+| .++ +..+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~ 96 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF 96 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc
Confidence 456889999998876 67789999999854332222222223333899988 77 44455545677777 555 44442
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee------------CCCCC
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL------------DSLFF 219 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~------------~~~~~ 219 (289)
. . .....++++|+|...++.. ..+.|..+|.++++...+. .....
T Consensus 97 ~--~----~~V~~v~~sp~g~~l~sgs-----------------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~ 153 (902)
T 2oaj_A 97 V--P----GKITSIDTDASLDWMLIGL-----------------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSP 153 (902)
T ss_dssp C--S----SCEEEEECCTTCSEEEEEE-----------------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCC
T ss_pred C--C----CCEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCCccccceeccccccccccccCCCC
Confidence 1 1 2467889999997554432 2467888888776643211 11234
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
...++|+|++..++++....+.| .||+...
T Consensus 154 V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 154 IVSIQWNPRDIGTVLISYEYVTL-TYSLVEN 183 (902)
T ss_dssp CCEEEEETTEEEEEEEECSSCEE-EEETTTT
T ss_pred eEEEEEccCCCCEEEEEeCCCcE-EEECCCC
Confidence 56899999754344454666788 8987653
No 227
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.0014 Score=54.42 Aligned_cols=177 Identities=12% Similarity=0.120 Sum_probs=103.4
Q ss_pred cceEEEccCCCEEEEecCCeEEEEecCCce-EEeeeecCcCccCeEEcC-CCcEEE-EeCCCceEEEeCCC-eEEEEecc
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHKNGTW-ENWKLIGGDTLLGITTTQ-ENEILV-CDADKGLLKVTEEG-VTVLASHV 154 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~~g~~-~~~~~~~~~p~~gl~~d~-~g~l~v-~~~~~~i~~~~~~g-~~~~~~~~ 154 (289)
..++.++ ++.++++..++.|..++ .++. ..+........ .+.+.+ ++++++ +.....+..++... ...+...
T Consensus 107 i~~~~~~-~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~- 182 (313)
T 3odt_A 107 VCSLSFQ-DGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVW-DAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGI- 182 (313)
T ss_dssp EEEEEEE-TTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEE-EEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSS-
T ss_pred EEEEEec-CCEEEEEeCCCCEEEEc-CCcEEEecccCCCcee-EEEEccCCCCEEEEEECCCCEEEEecCceEEEEecc-
Confidence 4556664 34556777889999998 3433 22322233344 666655 555444 44445566666322 3333211
Q ss_pred CCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE-eeCCCCCcceEEEecCCCEEE
Q 022967 155 NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLDSLFFANGVALSKDEDYLV 233 (289)
Q Consensus 155 ~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~-~~~~~~~p~gl~~~~d~~~l~ 233 (289)
.......+++.+++.++.+.. .+.|..+|..+++... +.........++++|++. ++
T Consensus 183 ---~~~~i~~~~~~~~~~~~~~~~------------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~ 240 (313)
T 3odt_A 183 ---HNDVVRHLAVVDDGHFISCSN------------------DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IV 240 (313)
T ss_dssp ---CSSCEEEEEEEETTEEEEEET------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EE
T ss_pred ---CcccEEEEEEcCCCeEEEccC------------------CCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EE
Confidence 123467889999998555442 3678888987665443 333344567899999985 55
Q ss_pred EEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 234 VCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 234 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
.+ ...+.|..||+..... ...+. ........++...+|.+.++..++.
T Consensus 241 ~~-~~dg~v~iwd~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~~~~dg~ 288 (313)
T 3odt_A 241 SC-GEDRTVRIWSKENGSL--KQVIT-LPAISIWSVDCMSNGDIIVGSSDNL 288 (313)
T ss_dssp EE-ETTSEEEEECTTTCCE--EEEEE-CSSSCEEEEEECTTSCEEEEETTSC
T ss_pred EE-ecCCEEEEEECCCCce--eEEEe-ccCceEEEEEEccCCCEEEEeCCCc
Confidence 55 4568899998764322 12221 2223345677888888766665554
No 228
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.96 E-value=0.0011 Score=63.20 Aligned_cols=179 Identities=9% Similarity=-0.023 Sum_probs=105.2
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEE-EeCCCceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v-~~~~~~i~~~~-~~g--~~~ 149 (289)
....++++.++|... ++..+|.|..++ .+|+... +....+... .+++.++|..++ +.....+..++ ..+ ...
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 345678999988755 777889999999 5565433 332334445 899999987544 44434566666 443 222
Q ss_pred EEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE-EeeCC-CCCcceEEEe
Q 022967 150 LASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILLDS-LFFANGVALS 226 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~~-~~~p~gl~~~ 226 (289)
...... .....+++.| +|.++++... .+.|..+|..++... .+... ......++++
T Consensus 135 ~~~~~~----~~v~~~~~~p~~~~~l~~~~~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 193 (814)
T 3mkq_A 135 TFEGHE----HFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY 193 (814)
T ss_dssp EEECCS----SCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCCCEEEEC
T ss_pred EEcCCC----CcEEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcceeEEecCCCCCEEEEEEE
Confidence 211111 2467889999 7765555332 367888887644322 22222 2456778999
Q ss_pred c--CCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 227 K--DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 227 ~--d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
| +++.++++ ...+.|..|+...... ...+. ...+....++..++|.+.++.
T Consensus 194 ~~~~~~~l~~~-~~dg~i~~~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 194 PLPDKPYMITA-SDDLTIKIWDYQTKSC--VATLE-GHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp CSTTCCEEEEE-CTTSEEEEEETTTTEE--EEEEE-CCSSCEEEEEECSSSSEEEEE
T ss_pred ECCCCCEEEEE-eCCCEEEEEECCCCcE--EEEEc-CCCCCEEEEEEcCCCCEEEEE
Confidence 8 88866655 5568899998764321 11111 122234456666666544433
No 229
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.96 E-value=0.00016 Score=61.56 Aligned_cols=147 Identities=12% Similarity=0.074 Sum_probs=84.4
Q ss_pred EccCCCEE-EEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcC---CCcEEE-EeCCCceEEEe-CCC--eEEEEe-c
Q 022967 84 VDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQ---ENEILV-CDADKGLLKVT-EEG--VTVLAS-H 153 (289)
Q Consensus 84 ~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~---~g~l~v-~~~~~~i~~~~-~~g--~~~~~~-~ 153 (289)
+.++++++ ++..++.|..++ .+++............ .+++++ ++..++ +.....+..++ .++ ...+.. .
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVC-SLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVS 254 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceE-EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeec
Confidence 45677765 666889999999 4455433333334455 899987 676544 44445566666 333 222210 0
Q ss_pred cCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCe--------------------EEE
Q 022967 154 VNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--------------------TSI 212 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--------------------~~~ 212 (289)
..+ .......+++.|+|. ++++... .+.|..+|.+.+. ...
T Consensus 255 ~~~-~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (357)
T 3i2n_A 255 EKA-HKSTVWQVRHLPQNRELFLTAGG-----------------AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN 316 (357)
T ss_dssp EEC-CSSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred cCC-CcCCEEEEEECCCCCcEEEEEeC-----------------CCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence 001 113467889999987 4544322 3455555533211 122
Q ss_pred eeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 213 LLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 213 ~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+.........++|+|+++.|.++....+.|..|++..
T Consensus 317 ~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 317 VTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 2223344578899999997776666678999998763
No 230
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.95 E-value=0.003 Score=54.91 Aligned_cols=178 Identities=13% Similarity=0.058 Sum_probs=103.0
Q ss_pred eEEEccC--CCEEEEecCCeEEEEe-cCCceEEee-e-----ecCcCccCeEEcC-CCcEEEEeCC-CceEEEe-C-CC-
Q 022967 81 DVCVDRN--GVLYTATRDGWIKRLH-KNGTWENWK-L-----IGGDTLLGITTTQ-ENEILVCDAD-KGLLKVT-E-EG- 146 (289)
Q Consensus 81 ~l~~d~~--g~l~v~~~~g~i~~~~-~~g~~~~~~-~-----~~~~p~~gl~~d~-~g~l~v~~~~-~~i~~~~-~-~g- 146 (289)
++.+.++ ..|+.+..++.|..|+ .+|+..... . ...... .+.+.+ +++++++... ..+..+| . .+
T Consensus 162 ~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 162 SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL-SLSINSLNANMFISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE-EEEECSSSCCEEEEEETTSCEEEEETTTTCC
T ss_pred EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE-EEEeecCCCCEEEEEECCCeEEEEECCCCCc
Confidence 3444443 3477888899999999 455433221 1 112233 667754 6666665433 4566666 3 33
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC--------C
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--------L 217 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~--------~ 217 (289)
+..+... ....+.+++.|+|..+++... .+.|..+|..+++....... .
T Consensus 241 ~~~~~~~h-----~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 241 AVRTYHGH-----EGDINSVKFFPDGQRFGTGSD-----------------DGTCRLFDMRTGHQLQVYNREPDRNDNEL 298 (380)
T ss_dssp CCEEECCC-----SSCCCEEEECTTSSEEEEECS-----------------SSCEEEEETTTTEEEEEECCCCSSSCCSS
T ss_pred ceEEECCc-----CCCeEEEEEecCCCeEEEEcC-----------------CCeEEEEECCCCcEEEEeccccccccccc
Confidence 3333211 124678999999987776542 46788888876654433221 1
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCc-ceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 218 FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKE-QTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 218 ~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
.....++|+|+++.|+.+ ...+.|+.||....... ..........+....+++.++|.+.++..
T Consensus 299 ~~v~~~~~s~~g~~l~~g-~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 299 PIVTSVAFSISGRLLFAG-YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp CSCSEEEECSSSSEEEEE-CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred CceEEEEECCCCCEEEEE-ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 224678999999966665 55688999987533211 11111112224456788888887655543
No 231
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.00082 Score=58.54 Aligned_cols=152 Identities=11% Similarity=0.077 Sum_probs=95.1
Q ss_pred CCcceEEEccC-CCEE-EEecCCeEEEEe-cCCceEEeeee-------cCcCccCeEEcCCC-cEEEE-eCCC---ceEE
Q 022967 77 NGPEDVCVDRN-GVLY-TATRDGWIKRLH-KNGTWENWKLI-------GGDTLLGITTTQEN-EILVC-DADK---GLLK 141 (289)
Q Consensus 77 ~~p~~l~~d~~-g~l~-v~~~~g~i~~~~-~~g~~~~~~~~-------~~~p~~gl~~d~~g-~l~v~-~~~~---~i~~ 141 (289)
....++++.++ +.++ ++..++.|..++ ..++....... ..... .+++.+++ .++++ .... .|..
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLS-VVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEE-EEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceE-EEEECCCCCCEEEEEECCCCCceEEE
Confidence 34567899987 5665 566889999999 44443322222 22344 89999887 45554 3333 5777
Q ss_pred Ee-CCC---eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE-eeC
Q 022967 142 VT-EEG---VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLD 215 (289)
Q Consensus 142 ~~-~~g---~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~-~~~ 215 (289)
++ .++ ...+.. + ....+..+++.| ++.++++... .+.|..+|.++++... +..
T Consensus 245 ~d~~~~~~~~~~~~~---~-~~~~v~~~~~s~~~~~~l~s~~~-----------------dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 245 WDLRNANTPLQTLNQ---G-HQKGILSLDWCHQDEHLLLSSGR-----------------DNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EETTSTTSCSBCCCS---C-CSSCEEEEEECSSCSSCEEEEES-----------------SSEEEEECSSSCCEEEEEEC
T ss_pred EeCCCCCCCcEEeec---C-ccCceeEEEeCCCCCCeEEEEeC-----------------CCCEEEeeCCCCccceeecC
Confidence 77 433 222210 1 113467899998 8876665432 4678888887665433 333
Q ss_pred CCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 216 SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 216 ~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
.......++|+|++..++++....+.|..|++...
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 34456789999998446666677789999998653
No 232
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.93 E-value=0.00016 Score=72.74 Aligned_cols=181 Identities=11% Similarity=0.051 Sum_probs=109.9
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~ 151 (289)
....++++.++|+.. ++..+|.|..++ .+++............ .+++.+++.++.+.....+..++ .++ ...+.
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVK-DFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEE-EEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEE-EEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 345678999988755 666889999999 4555443333333344 78888888887777656677788 666 44442
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCCcceEEEecCCC
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALSKDED 230 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~p~gl~~~~d~~ 230 (289)
.. ......+++.|||.++++... .+.|..+|.++++...... .......++|+||++
T Consensus 1083 ~~-----~~~v~~~~~s~d~~~l~s~s~-----------------d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~ 1140 (1249)
T 3sfz_A 1083 CH-----QGTVLSCAISSDATKFSSTSA-----------------DKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGI 1140 (1249)
T ss_dssp CC-----SSCCCCEEECSSSSSCEEECC-----------------SSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSS
T ss_pred cc-----CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCcceeeeeccCCCcEEEEEECCCCC
Confidence 21 124678999999976655432 3556666665544322222 223347789999999
Q ss_pred EEEEEeCCCCeEEEEEecCCCCc-ceeee-----eccCCCCCCceeeCCCCCEEEEE
Q 022967 231 YLVVCETFKFRCLKYWLKGESKE-QTEIF-----VENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~-~~~~~-----~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
.|..+. ..+.|..|++.+.... ..... .....+...++++.++|.+.++.
T Consensus 1141 ~lat~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A 1141 LLATGD-DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp EEEEEE-TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEE
T ss_pred EEEEEe-CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEEC
Confidence 666664 4577899998643221 11000 01122345668888888665544
No 233
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.93 E-value=0.003 Score=54.07 Aligned_cols=151 Identities=11% Similarity=0.061 Sum_probs=89.2
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEec-CCceEE---eeeecCcCccCeEEcCCCcEEEEe-CCCceEEEe-CCC--e
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHK-NGTWEN---WKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG--V 147 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~-~g~~~~---~~~~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g--~ 147 (289)
..-.++++.++|++. ++..++.|..++. .+.... +........ .+++.++|+++++. .+..+..++ .++ .
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVK-SVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCce-EEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 345678999988766 6668888888883 343322 222223345 89999999866654 334566666 433 3
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE---EeeCCCCCcceEE
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS---ILLDSLFFANGVA 224 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~---~~~~~~~~p~gl~ 224 (289)
+.+.. ..+ .......+++.|+|.+.++... .+.|..++.++++.. .+.........++
T Consensus 141 ~~~~~-~~~-h~~~v~~~~~~p~~~~l~s~s~-----------------d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~ 201 (345)
T 3fm0_A 141 ECVSV-LNS-HTQDVKHVVWHPSQELLASASY-----------------DDTVKLYREEEDDWVCCATLEGHESTVWSLA 201 (345)
T ss_dssp EEEEE-ECC-CCSCEEEEEECSSSSCEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred EEEEE-ecC-cCCCeEEEEECCCCCEEEEEeC-----------------CCcEEEEEecCCCEEEEEEecCCCCceEEEE
Confidence 22211 111 1124568899999976655332 244555555444432 2222334557899
Q ss_pred EecCCCEEEEEeCCCCeEEEEEec
Q 022967 225 LSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 225 ~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
|+|+++.|..+ ...+.|..|+..
T Consensus 202 ~sp~g~~l~s~-s~D~~v~iW~~~ 224 (345)
T 3fm0_A 202 FDPSGQRLASC-SDDRTVRIWRQY 224 (345)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEEEE
T ss_pred ECCCCCEEEEE-eCCCeEEEeccc
Confidence 99999966555 455778888763
No 234
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.93 E-value=0.0015 Score=65.72 Aligned_cols=185 Identities=12% Similarity=0.100 Sum_probs=110.9
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTV 149 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~ 149 (289)
..-.++++.++|.+. ++..+|.|..|+ .+++.. .+....+... .+++.++|++.++... ..|..++ .+| +..
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 445678999988876 566889999999 455533 3333334445 8999999976665433 4577777 566 443
Q ss_pred EEeccCCccccCccceEEcCCC--cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCCCCcceEEEe
Q 022967 150 LASHVNGSRINLADDLIAATDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALS 226 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG--~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~ 226 (289)
+... ......+++.+++ .+.++.. ..+.|..+|.++++..... ........++|+
T Consensus 695 ~~~~-----~~~v~~~~~~~~~~~~~l~sg~-----------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 695 YDEH-----SEQVNCCHFTNKSNHLLLATGS-----------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp EECC-----SSCEEEEEECSSSSCCEEEEEE-----------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEEC
T ss_pred EcCC-----CCcEEEEEEecCCCceEEEEEe-----------------CCCeEEEEECCCcchhheecCCCCCEEEEEEe
Confidence 3221 1245678888853 3444432 2466888888766654333 333455788999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceee----e------eccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEI----F------VENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~----~------~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
|+++.++.+ ...+.|..||+........-. + ..........++...+|...++...+.
T Consensus 753 p~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 753 PDDELLASC-SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp SSTTEEEEE-ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred cCCCEEEEE-ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 999966655 455889999976432111000 0 001112345577778887666654443
No 235
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.90 E-value=0.0066 Score=50.88 Aligned_cols=149 Identities=9% Similarity=-0.013 Sum_probs=88.2
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEe-cCCceE-EeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEEE
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~~ 151 (289)
-.++++.+++++. ++..++.|..++ .+++.. .+........ .+++.+++.++++... ..|..++ .++ .....
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 4567788877755 677889999999 456543 3333334455 8999999886665433 4566667 444 22221
Q ss_pred eccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE-EEeeCC-CCCcceEEEec-
Q 022967 152 SHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-SILLDS-LFFANGVALSK- 227 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~~~-~~~p~gl~~~~- 227 (289)
... ......+++.| ++.++++... .+.|..+|...+.. ..+..+ ....+.+.+.+
T Consensus 137 ~~h----~~~v~~v~~~p~~~~~l~sgs~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 137 EGH----EHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195 (304)
T ss_dssp CCC----CSCEEEEEECTTCTTEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCS
T ss_pred ccc----CCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEECCCCCccceeccCCcCcEEEEEEEEc
Confidence 111 12467889998 5666665332 36677777654332 122222 23334566765
Q ss_pred -CCCEEEEEeCCCCeEEEEEecCC
Q 022967 228 -DEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 228 -d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+++.| ++....+.|..||+...
T Consensus 196 ~~~~~l-~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 196 PDKPYM-ITASDDLTIKIWDYQTK 218 (304)
T ss_dssp TTCCEE-EEEETTSEEEEEETTTT
T ss_pred CCCCEE-EEEcCCCeEEEEeCCCC
Confidence 56644 44456688999987643
No 236
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.88 E-value=0.0027 Score=53.89 Aligned_cols=201 Identities=12% Similarity=0.013 Sum_probs=103.4
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEe-cCCceEEeeeecCcCccCeEE--cCCCcEEEE-eCCCceEEEe-CCC--eE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITT--TQENEILVC-DADKGLLKVT-EEG--VT 148 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~--d~~g~l~v~-~~~~~i~~~~-~~g--~~ 148 (289)
....++++.+++++. ++..+|.|..++ .+++............ .+++ ++++.++++ .....+..++ .++ ..
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM 165 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE
Confidence 345678899888755 677889999999 4555444433334445 8888 788875554 4434566677 555 33
Q ss_pred EEEeccCC--ccccCccceEEcCCCcEEEeeCCCccC----------ccc-----------cccccceecCCCEEEEEeC
Q 022967 149 VLASHVNG--SRINLADDLIAATDGSIYFSVASTKFG----------LHN-----------WGLDLLEAKPHGKLLKYDP 205 (289)
Q Consensus 149 ~~~~~~~~--~~~~~~~~l~~~~dG~lyv~~~~~~~~----------~~~-----------~~~~~~~~~~~g~i~~~~~ 205 (289)
.+...... .......-+....++.+.+-+...... ... ....+......+.|..++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 166 VLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred EEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 33211000 000111122333344444333221000 000 0000223334556666665
Q ss_pred CCCe----EEEeeCCCC------------CcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCce
Q 022967 206 SLNE----TSILLDSLF------------FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNI 269 (289)
Q Consensus 206 ~~~~----~~~~~~~~~------------~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i 269 (289)
+... ...+..... ....++++|+++.|+.+. ..+.|..||+..... ...+ .........+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~~--~~~~-~~~~~~v~~~ 321 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDARTK--LKTS-EQLDQPISAC 321 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEE--EEEC-CCCSSCEEEE
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCcE--EEEe-cCCCCCceEE
Confidence 5431 111111111 367889999999776664 457899999764321 1111 1222345678
Q ss_pred eeCCCCCEEEEEe
Q 022967 270 KLAPDGSFWIAIL 282 (289)
Q Consensus 270 ~~d~~G~lwv~~~ 282 (289)
++.++|.+.++..
T Consensus 322 ~~s~~g~~l~~~s 334 (368)
T 3mmy_A 322 CFNHNGNIFAYAS 334 (368)
T ss_dssp EECTTSSCEEEEE
T ss_pred EECCCCCeEEEEe
Confidence 8999996655543
No 237
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.87 E-value=0.0029 Score=53.80 Aligned_cols=156 Identities=8% Similarity=0.032 Sum_probs=96.6
Q ss_pred EeccCCcCCcceEEEccC---CC--EEEEecCCeEEEEe-cCCc-eEEeeeec-----CcCccCeEEcCC----CcEEE-
Q 022967 70 RLGEGILNGPEDVCVDRN---GV--LYTATRDGWIKRLH-KNGT-WENWKLIG-----GDTLLGITTTQE----NEILV- 132 (289)
Q Consensus 70 ~~~~~~~~~p~~l~~d~~---g~--l~v~~~~g~i~~~~-~~g~-~~~~~~~~-----~~p~~gl~~d~~----g~l~v- 132 (289)
.+..+--....++++.|+ +. ++++..++.|..++ .+++ ...+.... .... .+++.++ |.+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEEE
Confidence 444443345677888863 33 66777788899998 3343 33332211 2234 7888776 54444
Q ss_pred EeCCCceEEEe-CCC--eEEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC
Q 022967 133 CDADKGLLKVT-EEG--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (289)
Q Consensus 133 ~~~~~~i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 208 (289)
+.....|..++ .++ +..+.. . ......+++.| ++.+.++... .+.|..+|.+++
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~-~----~~~i~~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~~~~ 148 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVG-H----GNAINELKFHPRDPNLLLSVSK-----------------DHALRLWNIQTD 148 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEES-C----CSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTTT
T ss_pred ecCCCEEEEEEchhceEeeeecC-C----CCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEEeecC
Confidence 44434577777 555 333321 1 13567899999 8876665432 467888888777
Q ss_pred eEEEee----CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 209 ETSILL----DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 209 ~~~~~~----~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+..... ........++|+|+++.|+.+. ..+.|..||+..
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCC
Confidence 655443 2344567889999999776664 457899999764
No 238
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.86 E-value=0.0018 Score=61.26 Aligned_cols=155 Identities=11% Similarity=0.090 Sum_probs=87.6
Q ss_pred ceEEEccCCCEE-EE-ecCC----eEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCCCc-------------
Q 022967 80 EDVCVDRNGVLY-TA-TRDG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKG------------- 138 (289)
Q Consensus 80 ~~l~~d~~g~l~-v~-~~~g----~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~------------- 138 (289)
.++++.|||+.. ++ +..| .|+.++ .+|+............ ++++.+||+ |+++.....
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 357888988754 33 3333 788888 4555443222222345 799999986 666543222
Q ss_pred ---eEEEe-CCC-e-EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCC----
Q 022967 139 ---LLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL---- 207 (289)
Q Consensus 139 ---i~~~~-~~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---- 207 (289)
|++.+ .++ . ..+....... -....++.++|||+ |+++.... ......|+.+|.++
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDE-PKWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSSSS
T ss_pred CCEEEEEECCCCcccceEEeccCCC-CeEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECcccccc
Confidence 77777 444 2 1222211110 11245788999996 55543210 00135788888765
Q ss_pred --C--eEEEeeCCCCCcceEEEecCCCEEEEEeCC---CCeEEEEEecCC
Q 022967 208 --N--ETSILLDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKGE 250 (289)
Q Consensus 208 --~--~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~---~~~i~~~~~~~~ 250 (289)
+ ....+...... ..-.++++|+.||+.... +.+|+++++++.
T Consensus 273 ~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp SCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred cCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 3 34444433222 223588899988887543 357999998754
No 239
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.86 E-value=0.0014 Score=56.40 Aligned_cols=144 Identities=10% Similarity=0.058 Sum_probs=87.8
Q ss_pred ceEEEcc--CCC-EEEEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEEeCC-CceEEEe-CCC--eEEE
Q 022967 80 EDVCVDR--NGV-LYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG--VTVL 150 (289)
Q Consensus 80 ~~l~~d~--~g~-l~v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~~g--~~~~ 150 (289)
.++.+.+ +|+ |+.+..++.|..++ .+++... +........ .+++.++|.++++... ..+..+| ..+ ...+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN-SVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 4456655 455 45777899999999 5565433 322233445 8999999886665433 4466667 444 3322
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE-eeCCCCCcceEEEecCC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLDSLFFANGVALSKDE 229 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~-~~~~~~~p~gl~~~~d~ 229 (289)
... ........+++.++|.+.++... .+.|..+|..+++... +.........++|+||+
T Consensus 279 ~~~---~~~~~~~~~~~s~~g~~l~~g~~-----------------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 279 SKE---SIIFGASSVDFSLSGRLLFAGYN-----------------DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp CCT---TCCSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS
T ss_pred cCC---CcccceeEEEEeCCCCEEEEEEC-----------------CCcEEEEECCCCceEEEEECCCCcEEEEEECCCC
Confidence 111 11124567899999987665432 3668888876555433 33333455789999999
Q ss_pred CEEEEEeCCCCeEEEE
Q 022967 230 DYLVVCETFKFRCLKY 245 (289)
Q Consensus 230 ~~l~v~~~~~~~i~~~ 245 (289)
+.|..+ ...+.|..|
T Consensus 339 ~~l~sg-s~D~~v~vW 353 (354)
T 2pbi_B 339 TAFCSG-SWDHTLRVW 353 (354)
T ss_dssp SCEEEE-ETTSEEEEE
T ss_pred CEEEEE-cCCCCEEec
Confidence 965555 445677665
No 240
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.85 E-value=0.0026 Score=54.10 Aligned_cols=151 Identities=10% Similarity=0.010 Sum_probs=84.9
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEecCC--------ceE-EeeeecCcCccCeEEcCCCcEEEEe-CCCceEEEe-CC
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNG--------TWE-NWKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EE 145 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g--------~~~-~~~~~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~ 145 (289)
.-.++++.++|.+. ++..++.|..++.+. +.. .+........ .+++.++|+++++. .+..+..++ ..
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 45678999988866 666889898887421 111 1212223345 89999999866654 334466666 22
Q ss_pred -C--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE---EEeeCCCCC
Q 022967 146 -G--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET---SILLDSLFF 219 (289)
Q Consensus 146 -g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~---~~~~~~~~~ 219 (289)
+ .+.+.. ..+. ......+++.|+|.+.++... .+.|..+|..++.. ..+......
T Consensus 139 ~~~~~~~~~~-~~~h-~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~iW~~~~~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 139 SGEEYECISV-LQEH-SQDVKHVIWHPSEALLASSSY-----------------DDTVRIWKDYDDDWECVAVLNGHEGT 199 (330)
T ss_dssp TCCCCEEEEE-ECCC-SSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSSC
T ss_pred CCCCeEEEEE-eccC-CCceEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCCeeEEEEccCCCCc
Confidence 2 222211 1111 124678999999987776432 24455555433322 222223334
Q ss_pred cceEEEecC--CCEEEEEeCCCCeEEEEEecC
Q 022967 220 ANGVALSKD--EDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 220 p~gl~~~~d--~~~l~v~~~~~~~i~~~~~~~ 249 (289)
...++|+|+ +. .+++....+.|..|++.+
T Consensus 200 v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 200 VWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEECCSSSSC-EEEEEETTSCEEEEEEEE
T ss_pred EEEEEecCCCCee-EEEEEeCCCeEEEEEecC
Confidence 567899998 44 344445567888888754
No 241
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.84 E-value=0.00062 Score=54.56 Aligned_cols=142 Identities=11% Similarity=-0.010 Sum_probs=80.7
Q ss_pred CeEEcCCCcEEEEeCCCceEEEe-CCC-eEEE---EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceec
Q 022967 121 GITTTQENEILVCDADKGLLKVT-EEG-VTVL---ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAK 195 (289)
Q Consensus 121 gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~---~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~ 195 (289)
.++++++|.||.. ....+++.+ .++ -... ...+.....+.-..+.+|++|.||.+.
T Consensus 45 ~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~------------------ 105 (236)
T 1tl2_A 45 FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS------------------ 105 (236)
T ss_dssp EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE------------------
T ss_pred eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC------------------
Confidence 8999999999999 445699998 442 1100 011111122234688999999999983
Q ss_pred CCCEEEEEeCCC--Ce-----EEEeeC-CCCCcceEEEecCCCEEEEEeCCCCeEEEEEec-CCC---CcceeeeeccCC
Q 022967 196 PHGKLLKYDPSL--NE-----TSILLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLK-GES---KEQTEIFVENLP 263 (289)
Q Consensus 196 ~~g~i~~~~~~~--~~-----~~~~~~-~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~-~~~---~~~~~~~~~~~~ 263 (289)
.|.|+|+++-+ +. -+.+.. +...-.-|.++|+|. ||... ..++++-... +.. +..........-
T Consensus 106 -dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~ 181 (236)
T 1tl2_A 106 -KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGW 181 (236)
T ss_dssp -TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSG
T ss_pred -CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceeccCCc
Confidence 37899998732 11 122222 223336688999998 99887 4567663322 110 111111110000
Q ss_pred CCCCceeeCCCCCEEEEEeCccc
Q 022967 264 GGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 264 ~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
..-.-+..+.+|+||.+. ++.+
T Consensus 182 ~~yr~l~f~~~G~l~~v~-~g~~ 203 (236)
T 1tl2_A 182 DTFKFLFFSSVGTLFGVQ-GGKF 203 (236)
T ss_dssp GGEEEEEECTTSCEEEEE-TTEE
T ss_pred ceEEEEEECCCCcEEEEe-CCeE
Confidence 011126688888888887 5443
No 242
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.84 E-value=0.0027 Score=54.85 Aligned_cols=150 Identities=12% Similarity=0.047 Sum_probs=88.1
Q ss_pred CCcceEEEcc-CCCEE-EEecCCeEEEEe-cCCceEEeee--------------ecCcCccCeEEcC-CCcEEE-EeCCC
Q 022967 77 NGPEDVCVDR-NGVLY-TATRDGWIKRLH-KNGTWENWKL--------------IGGDTLLGITTTQ-ENEILV-CDADK 137 (289)
Q Consensus 77 ~~p~~l~~d~-~g~l~-v~~~~g~i~~~~-~~g~~~~~~~--------------~~~~p~~gl~~d~-~g~l~v-~~~~~ 137 (289)
..-.++++.+ +|++. ++..+|.|..++ .++....... ...... .+++.+ ++.+++ +....
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEEEEETTS
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEEEEeCCC
Confidence 4456789988 88766 667889999998 3332111110 122334 788887 555544 44445
Q ss_pred ceEEEe-CCC-eEEEEeccCCccccCccceEEcC---CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE
Q 022967 138 GLLKVT-EEG-VTVLASHVNGSRINLADDLIAAT---DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (289)
Q Consensus 138 ~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~---dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~ 212 (289)
.+..++ .++ ...... .. .....+.+.+ ++.+.++.. ..+.|..+|.++++...
T Consensus 123 ~i~iwd~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFN-FE----ETVYSHHMSPVSTKHCLVAVGT-----------------RGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp EEEEEETTTTEEEEEEE-CS----SCEEEEEECSSCSSCCEEEEEE-----------------SSSSEEEEESSSSCCCE
T ss_pred eEEEeeCCCCccceecc-CC----CceeeeEeecCCCCCcEEEEEc-----------------CCCeEEEEeCCCcceee
Confidence 577777 555 322221 11 1244566665 333444432 23668888877554333
Q ss_pred -eeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 213 -LLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 213 -~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+.........++++|+++.++++....+.|..||+..
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 3233344578999999997666556668899999854
No 243
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.82 E-value=0.0029 Score=59.68 Aligned_cols=171 Identities=5% Similarity=-0.061 Sum_probs=92.1
Q ss_pred CcceEEEccCCCEE-EEec---------CCeEEEEe-cCCceEEeeeecC---cCccCeEEcCCCc-EEEEeCCCceEEE
Q 022967 78 GPEDVCVDRNGVLY-TATR---------DGWIKRLH-KNGTWENWKLIGG---DTLLGITTTQENE-ILVCDADKGLLKV 142 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~---------~g~i~~~~-~~g~~~~~~~~~~---~p~~gl~~d~~g~-l~v~~~~~~i~~~ 142 (289)
...++++.|||+.. ++.. ++.|+.++ .+|+...+....+ ... .+++.+||+ |.++. ...|+.+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~-~~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIF-ENNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEE-TTEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEE-CCeEEEE
Confidence 36789999999854 4433 26788888 4555544432222 245 788999996 44444 3678888
Q ss_pred e-CCC-eEEEEeccCCcc--------------ccCccceEEcCCCc-EEEeeCC-CccCccc----------ccccc-c-
Q 022967 143 T-EEG-VTVLASHVNGSR--------------INLADDLIAATDGS-IYFSVAS-TKFGLHN----------WGLDL-L- 192 (289)
Q Consensus 143 ~-~~g-~~~~~~~~~~~~--------------~~~~~~l~~~~dG~-lyv~~~~-~~~~~~~----------~~~~~-~- 192 (289)
+ .+| ...+........ +....+++++|||+ |+++... ....... ....+ +
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 8 556 544433211100 11236799999996 5444311 0000000 00000 0
Q ss_pred ---eecCCCEEEEEeCCCCeE-EEeeCC------CCCcceEEEecCCCEEEEE-eCC--CCeEEEEEecCC
Q 022967 193 ---EAKPHGKLLKYDPSLNET-SILLDS------LFFANGVALSKDEDYLVVC-ETF--KFRCLKYWLKGE 250 (289)
Q Consensus 193 ---~~~~~g~i~~~~~~~~~~-~~~~~~------~~~p~gl~~~~d~~~l~v~-~~~--~~~i~~~~~~~~ 250 (289)
.......|+.+|.++++. ..+... ......++|+|||+.++.. +.. ...|+.+|+++.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 001123788889887763 333221 1223568999999966444 332 246788887654
No 244
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.81 E-value=0.0002 Score=67.85 Aligned_cols=130 Identities=8% Similarity=-0.054 Sum_probs=82.3
Q ss_pred cceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeeecCc----CccCeEEcCCCcE-EEEeC---------CCceEEEe
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGGD----TLLGITTTQENEI-LVCDA---------DKGLLKVT 143 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~----p~~gl~~d~~g~l-~v~~~---------~~~i~~~~ 143 (289)
+.++.+.++|.++....++.|+.++ .+|+...+...... .. .+++.+||+. .++.. ...++.++
T Consensus 18 ~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 18 TFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 3467788888776666788999999 45565554432222 45 7899999974 33332 13467777
Q ss_pred -CCC-e---EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC
Q 022967 144 -EEG-V---TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL 217 (289)
Q Consensus 144 -~~g-~---~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 217 (289)
.+| . ..+ . .....++++|||+ |.++. .+.|+.++.++++...+....
T Consensus 97 ~~~g~~~~~~~l----~----~~~~~~~~SPDG~~la~~~-------------------~~~i~~~~~~~g~~~~l~~~~ 149 (719)
T 1z68_A 97 LSNGEFVRGNEL----P----RPIQYLCWSPVGSKLAYVY-------------------QNNIYLKQRPGDPPFQITFNG 149 (719)
T ss_dssp TTTTEECCSSCC----C----SSBCCEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCCCC
T ss_pred CCCCccccceec----C----cccccceECCCCCEEEEEE-------------------CCeEEEEeCCCCCcEEEecCC
Confidence 555 3 222 1 2356789999995 55542 246888888766654442111
Q ss_pred -------------------CCcceEEEecCCCEEEEEe
Q 022967 218 -------------------FFANGVALSKDEDYLVVCE 236 (289)
Q Consensus 218 -------------------~~p~gl~~~~d~~~l~v~~ 236 (289)
....+++|+|||+.|+++.
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 1124799999999887764
No 245
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.80 E-value=0.0089 Score=51.52 Aligned_cols=149 Identities=10% Similarity=0.011 Sum_probs=87.0
Q ss_pred CCcceEEEcc-CCCEE-EEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcC---CCcEEE-EeCCCceEEEe-CCC--
Q 022967 77 NGPEDVCVDR-NGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQ---ENEILV-CDADKGLLKVT-EEG-- 146 (289)
Q Consensus 77 ~~p~~l~~d~-~g~l~-v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~---~g~l~v-~~~~~~i~~~~-~~g-- 146 (289)
....++++.+ +++++ ++..+|.|..++ .+++............ .+.+.+ ++.+++ +.....+..++ .++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 3456688888 66554 666789999999 4454433333233334 666654 333444 44445677777 555
Q ss_pred eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCe--EEEe----------
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--TSIL---------- 213 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~~---------- 213 (289)
...+... ......+++.|++. ++++... .+.|..+|...+. ...+
T Consensus 179 ~~~~~~~-----~~~v~~~~~~~~~~~ll~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 179 SHILQGH-----RQEILAVSWSPRYDYILATASA-----------------DSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp CEEECCC-----CSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred eeeecCC-----CCcEEEEEECCCCCcEEEEEcC-----------------CCcEEEEECCCCCccccccccccccccee
Confidence 4433211 12456889999986 5544322 3567777765432 1111
Q ss_pred -----eCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 214 -----LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 214 -----~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
.........++++|+++.|+.+. ..+.|..|++..
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~ 276 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSN 276 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT
T ss_pred eccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCC
Confidence 11123346789999999777664 457788888764
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.79 E-value=0.00079 Score=56.97 Aligned_cols=149 Identities=13% Similarity=0.060 Sum_probs=88.3
Q ss_pred CCcceEEEccCCCE-EEEecCCeEEEEe-cC---------CceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-C
Q 022967 77 NGPEDVCVDRNGVL-YTATRDGWIKRLH-KN---------GTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-E 144 (289)
Q Consensus 77 ~~p~~l~~d~~g~l-~v~~~~g~i~~~~-~~---------g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~ 144 (289)
....++++.+ +++ +++..++.|..++ .. ++..........+. .+++.+++ ++++.....+..++ .
T Consensus 102 ~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~-l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 102 LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIF-TMDTNSSR-LIVGMNNSQVQWFRLP 178 (342)
T ss_dssp SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEE-EEEECSSE-EEEEESTTEEEEEESS
T ss_pred CceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceE-EEEecCCc-EEEEeCCCeEEEEECC
Confidence 3456788888 554 4677889999998 22 22111111233445 88898776 77777656688888 5
Q ss_pred C-C-e--EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC-------eEEE
Q 022967 145 E-G-V--TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-------ETSI 212 (289)
Q Consensus 145 ~-g-~--~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-------~~~~ 212 (289)
. + . ....... ...+..+++.| +|.++++... .+.+..++.+.+ ....
T Consensus 179 ~~~~~~~~~~~~~~----~~~i~~i~~~~~~~~~l~~~~~-----------------dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 179 LCEDDNGTIEESGL----KYQIRDVALLPKEQEGYACSSI-----------------DGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp CCTTCCCEEEECSC----SSCEEEEEECSGGGCEEEEEET-----------------TSEEEEEECCTTCCSTTCTTCEE
T ss_pred ccccccceeeecCC----CCceeEEEECCCCCCEEEEEec-----------------CCcEEEEEEcCCCccccccccee
Confidence 5 4 2 2221111 12467889999 8876665432 244544443322 2222
Q ss_pred eeCCC---------CCcceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 213 LLDSL---------FFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 213 ~~~~~---------~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+.... .....++|+|+++.|+.+. ..+.|..||+...
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTR 283 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTTT
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEcCccH
Confidence 32221 2567889999999776664 4578999997643
No 247
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.78 E-value=0.011 Score=49.49 Aligned_cols=66 Identities=24% Similarity=0.299 Sum_probs=40.1
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEec-CCc--eEE---eeeecCcCccCeEEcC--CCcEEEE-eCCCceEEEe
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHK-NGT--WEN---WKLIGGDTLLGITTTQ--ENEILVC-DADKGLLKVT 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~-~g~--~~~---~~~~~~~p~~gl~~d~--~g~l~v~-~~~~~i~~~~ 143 (289)
..-.++++.++|++. ++..+|.|..++. ++. ... +........ .+++.+ +++++++ .....+..++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 456778999988755 6678899999983 221 111 122223344 889987 4765554 4334455565
No 248
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.77 E-value=0.0037 Score=58.91 Aligned_cols=147 Identities=16% Similarity=0.127 Sum_probs=89.2
Q ss_pred cceEEEccCCCE-EEEecCCeEEEEecCCceEE-eeee----cCcCccCeEEcCCC--cEEE-EeCCCceEEEe-CCC-e
Q 022967 79 PEDVCVDRNGVL-YTATRDGWIKRLHKNGTWEN-WKLI----GGDTLLGITTTQEN--EILV-CDADKGLLKVT-EEG-V 147 (289)
Q Consensus 79 p~~l~~d~~g~l-~v~~~~g~i~~~~~~g~~~~-~~~~----~~~p~~gl~~d~~g--~l~v-~~~~~~i~~~~-~~g-~ 147 (289)
..++++.++|+. .++..++.|..++..+.... +... ..... .+++.+++ .+++ +..+..|..+| .++ .
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS-CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE-EEEECSCSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE-EEEEeCCCCcceEEEEeCCCeEEEEECCCCcE
Confidence 455778887664 46667888888885443222 1111 11233 67888765 3344 44445577777 555 3
Q ss_pred -EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEe
Q 022967 148 -TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALS 226 (289)
Q Consensus 148 -~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~ 226 (289)
..+.. . ......++++|+|++.++... .+.|..+|..+++.............++|+
T Consensus 554 ~~~~~~-h----~~~v~~v~~spdg~~l~sg~~-----------------Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 611 (694)
T 3dm0_A 554 RSTLAG-H----TGYVSTVAVSPDGSLCASGGK-----------------DGVVLLWDLAEGKKLYSLEANSVIHALCFS 611 (694)
T ss_dssp EEEECC-C----SSCEEEEEECTTSSEEEEEET-----------------TSBCEEEETTTTEEEECCBCSSCEEEEEEC
T ss_pred EEEEcC-C----CCCEEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCceEEEecCCCcEEEEEEc
Confidence 33211 1 124678999999987776432 366777887766644333333446778999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCC
Q 022967 227 KDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 227 ~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
|++..|..+. .+.|..||+...
T Consensus 612 p~~~~l~~~~--~~~i~iwd~~~~ 633 (694)
T 3dm0_A 612 PNRYWLCAAT--EHGIKIWDLESK 633 (694)
T ss_dssp SSSSEEEEEE--TTEEEEEETTTT
T ss_pred CCCcEEEEEc--CCCEEEEECCCC
Confidence 9998665553 467999987654
No 249
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.74 E-value=0.00036 Score=60.46 Aligned_cols=156 Identities=14% Similarity=0.065 Sum_probs=85.1
Q ss_pred cceEEEccCCCE-EE-Eec--CCeEEEEec-CCceEEeeeecCcCccCeEEcCCCc-EEEEeCCCceEEEe-CCC-eEEE
Q 022967 79 PEDVCVDRNGVL-YT-ATR--DGWIKRLHK-NGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG-VTVL 150 (289)
Q Consensus 79 p~~l~~d~~g~l-~v-~~~--~g~i~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g-~~~~ 150 (289)
...+++.|+|+. ++ ... ...|+.++. .|+...+.........++.+.+||+ |+++.....++.++ ..+ .+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 455678888874 33 333 346888884 4555444333333331478889986 54555445699998 555 5444
Q ss_pred EeccCCccccCcc--c----------------eEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 151 ASHVNGSRINLAD--D----------------LIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 151 ~~~~~~~~~~~~~--~----------------l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
.....+ ..+. . ..+.|||+ +.+.. .........|+.+|.++++..
T Consensus 118 ~~~~~~---~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~-------------~~~~~~~~~l~~~d~~~g~~~ 181 (396)
T 3c5m_A 118 YTVDEE---WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAE-------------FYHTNPTCRLIKVDIETGELE 181 (396)
T ss_dssp EECCTT---EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH-------------HHHTCCCEEEEEEETTTCCEE
T ss_pred Eecccc---cCCCCCEEEeccCCccccccccccccCCCCcceeeee-------------eccCCCcceEEEEECCCCcEE
Confidence 331111 0000 0 11122221 11100 000023457999999888776
Q ss_pred EeeCCCCCcceEEEec-CCCEEEEEeCC-C----CeEEEEEecCC
Q 022967 212 ILLDSLFFANGVALSK-DEDYLVVCETF-K----FRCLKYWLKGE 250 (289)
Q Consensus 212 ~~~~~~~~p~gl~~~~-d~~~l~v~~~~-~----~~i~~~~~~~~ 250 (289)
.+.........++|+| |++.++++... . .+|+.+++++.
T Consensus 182 ~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 182 VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC
Confidence 6655445567789999 78766555333 2 47999987654
No 250
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.72 E-value=0.017 Score=49.19 Aligned_cols=175 Identities=10% Similarity=0.027 Sum_probs=97.7
Q ss_pred cceEEE-----cc-CCCEE-EEecCCeEEEEec-CCc-------eE-EeeeecCcCccCeEEcCCCcEEEEeCC-CceEE
Q 022967 79 PEDVCV-----DR-NGVLY-TATRDGWIKRLHK-NGT-------WE-NWKLIGGDTLLGITTTQENEILVCDAD-KGLLK 141 (289)
Q Consensus 79 p~~l~~-----d~-~g~l~-v~~~~g~i~~~~~-~g~-------~~-~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~ 141 (289)
-.++++ .+ ++.+. .+..++.|..|+. +++ .. .+........ .+++.+++.+.++... ..+..
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~-~~~~~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS-DLALSQENCFAISSSWDKTLRL 102 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE-EEEECSSTTEEEEEETTSEEEE
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE-EEEECCCCCEEEEEcCCCcEEE
Confidence 456676 44 67655 6668898988883 221 11 1111222334 8899998887665444 44666
Q ss_pred Ee-CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee---C
Q 022967 142 VT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL---D 215 (289)
Q Consensus 142 ~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~---~ 215 (289)
++ .++ +..+... ......+++.|+|...++... .+.|..+|..+....... .
T Consensus 103 wd~~~~~~~~~~~~h-----~~~v~~v~~sp~~~~l~s~~~-----------------d~~i~~wd~~~~~~~~~~~~~~ 160 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGH-----QSEVYSVAFSPDNRQILSAGA-----------------EREIKLWNILGECKFSSAEKEN 160 (343)
T ss_dssp EETTSSCEEEEEECC-----CSCEEEEEECSSTTEEEEEET-----------------TSCEEEEESSSCEEEECCTTTS
T ss_pred EECCCCcEEEEEcCC-----CCcEEEEEECCCCCEEEEEcC-----------------CCEEEEEeccCCceeeeecccC
Confidence 67 556 4433221 124678999999986665432 356777776533332222 1
Q ss_pred CCCCcceEEEecCC----------CEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEE
Q 022967 216 SLFFANGVALSKDE----------DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 216 ~~~~p~gl~~~~d~----------~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
.......++++|++ . ++++-...+.|..||.... ....+. ........+++.++|.+.++.
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~---~~~~~~-~h~~~v~~~~~s~~g~~l~sg 231 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAP-YFASVGWDGRLKVWNTNFQ---IRYTFK-AHESNVNHLSISPNGKYIATG 231 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCC-EEEEEETTSEEEEEETTTE---EEEEEE-CCSSCEEEEEECTTSSEEEEE
T ss_pred CCceeeeeeeccccccccccCCCCC-EEEEEcCCCEEEEEcCCCc---eeEEEc-CccccceEEEECCCCCEEEEE
Confidence 12234567888876 4 4444455688988883321 111121 222344567778888655544
No 251
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.72 E-value=0.0028 Score=54.15 Aligned_cols=181 Identities=16% Similarity=0.122 Sum_probs=98.2
Q ss_pred cceEEEccCCCEEEEecCCeEEEEecCC-ceEEeeeec-CcCccCeEEcCCCcEEEEeCCCceEEEeCC-C--eEEEEec
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIG-GDTLLGITTTQENEILVCDADKGLLKVTEE-G--VTVLASH 153 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~~g-~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~~~i~~~~~~-g--~~~~~~~ 153 (289)
+..|++..++++|+...+|.|++-...| .++...... .... ++++++++.+|++.....+++.... | .+.+...
T Consensus 124 ~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~-~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~ 202 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMR-NLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRT 202 (327)
T ss_dssp EEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEE-EEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECC
T ss_pred eEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceE-EEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCC
Confidence 3456666678888766677777765334 355443221 2334 7888888888887765667777643 5 5554221
Q ss_pred cCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC-eEEEeeCC-CC---CcceEEEecC
Q 022967 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLDS-LF---FANGVALSKD 228 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~~-~~---~p~gl~~~~d 228 (289)
.......++++++|.+|+... .|.+++.+.+++ ..+.+... +. ....+++.++
T Consensus 203 ----~~~~~~~~~~~~~g~~~~~~~------------------~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 203 ----TSRRLHNMGFTPDGRLWMIVN------------------GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp ----SSSCEEEEEECTTSCEEEEET------------------TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred ----CCCccceeEECCCCCEEEEeC------------------CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC
Confidence 112456788899999998753 256666544422 23322211 11 2245667766
Q ss_pred CCEEEEEeCCCCeEEEEEecC-CCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 229 EDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
+. +|++.. ...|++- .++ .+...... ....+.....+.++.++.+|++...|.+
T Consensus 261 ~~-~~~~g~-~g~i~~S-~DgG~tW~~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~G~i 315 (327)
T 2xbg_A 261 NE-VWLAGG-AGALLCS-QDGGQTWQQDVD-VKKVPSNFYKILFFSPDQGFILGQKGIL 315 (327)
T ss_dssp SC-EEEEES-TTCEEEE-SSTTSSCEECGG-GTTSSSCCCEEEEEETTEEEEECSTTEE
T ss_pred CE-EEEEeC-CCeEEEe-CCCCcccEEcCc-cCCCCCCeEEEEEECCCceEEEcCCceE
Confidence 66 777644 3456432 232 22211100 0011222345666556677777766654
No 252
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.71 E-value=0.003 Score=60.36 Aligned_cols=184 Identities=16% Similarity=0.123 Sum_probs=102.1
Q ss_pred CcceEEEccCCCE-EEEecCCeEEEEec-CCceEE---eeeecCcCccCeEEcCC--CcEEEE-eCCCceEEEe-CCC-e
Q 022967 78 GPEDVCVDRNGVL-YTATRDGWIKRLHK-NGTWEN---WKLIGGDTLLGITTTQE--NEILVC-DADKGLLKVT-EEG-V 147 (289)
Q Consensus 78 ~p~~l~~d~~g~l-~v~~~~g~i~~~~~-~g~~~~---~~~~~~~p~~gl~~d~~--g~l~v~-~~~~~i~~~~-~~g-~ 147 (289)
...++++.++|.+ .++..+|.|..++. ++.... +....+... .+++.++ ++++++ ..+..|..++ .++ .
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 3456777787764 47778999999983 232222 222223334 8888765 765554 4434566666 555 3
Q ss_pred EEEEeccCCccccCccceEEcCC--CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe---EEEeeCCCCCcce
Q 022967 148 TVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFANG 222 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~d--G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~---~~~~~~~~~~p~g 222 (289)
..+... .+ .......+++.|+ |.++++... .+.|..+|..++. ...+.........
T Consensus 90 ~~~~~~-~~-h~~~V~~v~~sp~~~~~~l~sgs~-----------------dg~I~vwdl~~~~~~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 90 SQIAVH-AV-HSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (753)
T ss_dssp EEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred cccccc-cC-CCCCeEEEEECCCCCCCEEEEEeC-----------------CCcEEEEEeecCCCcceeEeecCCCceEE
Confidence 332221 11 1134678899998 876665432 4678788876542 2222233344577
Q ss_pred EEEec-------------CCCEEEEEeCCCCeEEEEEecCCCCc-ceeeeeccCCCCCCceeeCCC---CCEEEEEe
Q 022967 223 VALSK-------------DEDYLVVCETFKFRCLKYWLKGESKE-QTEIFVENLPGGPDNIKLAPD---GSFWIAIL 282 (289)
Q Consensus 223 l~~~~-------------d~~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~---G~lwv~~~ 282 (289)
++++| +++.++.+ ...+.|..||+...... ..........+....++..++ |.+.++..
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp EEECCCC---------CGGGCCEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEecCcccccccccccCCCCCEEEEE-ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 88888 47755555 45688999998754221 111111122233455666766 55544443
No 253
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.71 E-value=0.0079 Score=55.27 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=90.0
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEecCCceEEeeeecC-----cCccCeEEcCCCc-EEEEeCCCceEEEe-CCC-e
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWENWKLIGG-----DTLLGITTTQENE-ILVCDADKGLLKVT-EEG-V 147 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~~~~~~~~~-----~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g-~ 147 (289)
....++++.|+|... +++.+|.|..++.++....+. ... ... .++|.+||+ |+++..++.|..++ .++ .
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~-svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYH-CFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEE-EEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEE-EEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 446778999988855 777899999998555333332 111 244 799999997 55555445566666 444 3
Q ss_pred --------EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE----EEeeC
Q 022967 148 --------TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET----SILLD 215 (289)
Q Consensus 148 --------~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~----~~~~~ 215 (289)
..+.....+ .......+++.||| +..+.. .+.+..++.+++.. ..+..
T Consensus 164 ~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-Laass~------------------D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 164 NTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-LVAALS------------------NNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp TCCCCEEEEEEECSCTT-CCCCEEEEEEETTE-EEEEET------------------TCCEEEECCCSSSSCCCEEEEEC
T ss_pred ccccceeeeeeeccccc-ccccEEEEEEcCCc-EEEEeC------------------CCeEEEEECCCCccccceeeecc
Confidence 112111122 12467799999999 444332 24566677665552 12222
Q ss_pred C-CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCC
Q 022967 216 S-LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 216 ~-~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
+ -.....++|+ ++.|..+ . .+.|..|++.+.
T Consensus 224 ~h~~~V~svaFs--g~~LASa-~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 224 ASRRKITDLKIV--DYKVVLT-C-PGYVHKIDLKNY 255 (588)
T ss_dssp CCSSCCCCEEEE--TTEEEEE-C-SSEEEEEETTTT
T ss_pred cccCcEEEEEEE--CCEEEEE-e-CCeEEEEECCCC
Confidence 2 2456788998 4655555 3 489999998764
No 254
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.014 Score=49.43 Aligned_cols=150 Identities=13% Similarity=0.078 Sum_probs=84.2
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEec-CCceE--Eee-e--ecCcCccCeEEcCCCcEEEEeCC-CceEEEeC-CC---
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLHK-NGTWE--NWK-L--IGGDTLLGITTTQENEILVCDAD-KGLLKVTE-EG--- 146 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~~--~~~-~--~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~-~g--- 146 (289)
.-.+++++++ .|.++..++.|..++. .+... ... . ...... .+++.+++.++++... ..+..++. .+
T Consensus 16 ~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 16 KIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR-SVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp CEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE-EEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred ceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE-EEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 3456777766 5557778899999983 33222 111 1 122334 8999999987665433 44555552 11
Q ss_pred ---eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCC-CC---eE-EEeeCCCC
Q 022967 147 ---VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LN---ET-SILLDSLF 218 (289)
Q Consensus 147 ---~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~---~~-~~~~~~~~ 218 (289)
.+.+. ...+. ......+++.|+|.+.++... .+.|..+|.+ .+ +. ..+.....
T Consensus 94 ~~~~~~~~-~~~~h-~~~V~~v~~sp~g~~las~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 94 TFEMDLLA-IIEGH-ENEVKGVAWSNDGYYLATCSR-----------------DKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp -CCCEEEE-EEC-----CEEEEEECTTSCEEEEEET-----------------TSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred cccceeEE-EEcCC-CCcEEEEEECCCCCEEEEEeC-----------------CCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 11111 11111 124678999999987666432 3556666663 22 22 22223334
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 219 ~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
....++|+|+++.|..+ ...+.|..|+...
T Consensus 155 ~v~~v~~~p~~~~l~s~-s~D~~i~iW~~~~ 184 (330)
T 2hes_X 155 DVKHVIWHPSEALLASS-SYDDTVRIWKDYD 184 (330)
T ss_dssp CEEEEEECSSSSEEEEE-ETTSCEEEEEEET
T ss_pred ceEEEEECCCCCEEEEE-cCCCeEEEEECCC
Confidence 45788999999855544 5567888888754
No 255
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.68 E-value=0.015 Score=48.86 Aligned_cols=183 Identities=12% Similarity=0.051 Sum_probs=97.8
Q ss_pred CCcceEEEccCCCEE-EEecCCeEEEEecCC-ceEEeee-ecCcCccCeEEcCCCcEEEE-eCCCceEEEeCCC-eEEEE
Q 022967 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNG-TWENWKL-IGGDTLLGITTTQENEILVC-DADKGLLKVTEEG-VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g-~~~~~~~-~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~~~g-~~~~~ 151 (289)
....++++.++|++. ++..++.|..++... ....... ...... .+.+.+++..+++ .....+..++..+ .....
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCceEEE
Confidence 345678899988866 666888888888433 2222222 222233 5556666665444 4334455556333 22211
Q ss_pred eccCCccccCccceEEcCCC--cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcceEEEecC
Q 022967 152 SHVNGSRINLADDLIAATDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKD 228 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG--~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~gl~~~~d 228 (289)
.. .+ .......+++.+++ .++++.. ..+.|..+|..+++......+ ......++|+|+
T Consensus 166 ~~-~~-~~~~v~~~~~~~~~~~~~~~s~~-----------------~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~ 226 (340)
T 4aow_A 166 QD-ES-HSEWVSCVRFSPNSSNPIIVSCG-----------------WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD 226 (340)
T ss_dssp CS-SS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred Ee-cc-ccCcccceEEccCCCCcEEEEEc-----------------CCCEEEEEECCCCceeeEecCCCCcEEEEEECCC
Confidence 11 11 11234456666654 3444432 235677788877665544333 334577899999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCc
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQV 284 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g 284 (289)
++.|+.+ ...+.|..||+..... ...+. .......+...+++.+..+..++
T Consensus 227 ~~~l~s~-s~Dg~i~iwd~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~~~d~ 277 (340)
T 4aow_A 227 GSLCASG-GKDGQAMLWDLNEGKH--LYTLD--GGDIINALCFSPNRYWLCAATGP 277 (340)
T ss_dssp SSEEEEE-ETTCEEEEEETTTTEE--EEEEE--CSSCEEEEEECSSSSEEEEEETT
T ss_pred CCEEEEE-eCCCeEEEEEeccCce--eeeec--CCceEEeeecCCCCceeeccCCC
Confidence 9966655 4568899998764321 11111 11223345555555555555443
No 256
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.66 E-value=0.0019 Score=64.00 Aligned_cols=170 Identities=9% Similarity=0.077 Sum_probs=100.9
Q ss_pred eEEEccCCCEEEEecCCeEEEEecCC-ceEEeee-----------ecCcCccCeEEc-CCCc-EEEEeCCCceEEEe-CC
Q 022967 81 DVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKL-----------IGGDTLLGITTT-QENE-ILVCDADKGLLKVT-EE 145 (289)
Q Consensus 81 ~l~~d~~g~l~v~~~~g~i~~~~~~g-~~~~~~~-----------~~~~p~~gl~~d-~~g~-l~v~~~~~~i~~~~-~~ 145 (289)
.+++.++|+..+...++.|+.++.++ .+..+.. ...... .+++. +||+ |.++. ...++.++ .+
T Consensus 249 ~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~-~~~~S~pdG~~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 249 PRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKF-AEDFSPLDGDLIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp EEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGG-EEEEEECGGGCEEEEE-TTEEEEECTTS
T ss_pred eeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccc-eeeecCCCCCEEEEEE-cCEEEEEcCCC
Confidence 45777777744333577888887422 3332211 111345 88999 9986 44444 45688888 45
Q ss_pred C-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEE-EEeCCCCeEEEeeCCCCCcce
Q 022967 146 G-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLL-KYDPSLNETSILLDSLFFANG 222 (289)
Q Consensus 146 g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~-~~~~~~~~~~~~~~~~~~p~g 222 (289)
+ ...+.. .. ......+++. ||. |+++.. ...++ .++.++++...+.........
T Consensus 327 ~~~~~~~~-~~---~~~~~~~~~s-dg~~l~~~s~------------------~~~l~~~~d~~~~~~~~l~~~~~~~~~ 383 (1045)
T 1k32_A 327 TYVLKVPE-PL---RIRYVRRGGD-TKVAFIHGTR------------------EGDFLGIYDYRTGKAEKFEENLGNVFA 383 (1045)
T ss_dssp SBEEECSC-CS---CEEEEEECSS-SEEEEEEEET------------------TEEEEEEEETTTCCEEECCCCCCSEEE
T ss_pred CceEEccC-CC---cceEEeeeEc-CCCeEEEEEC------------------CCceEEEEECCCCCceEecCCccceee
Confidence 5 433211 11 1134566777 774 444321 25788 889887776665533455678
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEE
Q 022967 223 VALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWI 279 (289)
Q Consensus 223 l~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv 279 (289)
++|+|||++|+++.. .+.|+.+|+++.... .......+....++..+||+..+
T Consensus 384 ~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~---~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 384 MGVDRNGKFAVVAND-RFEIMTVDLETGKPT---VIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEECTTSSEEEEEET-TSEEEEEETTTCCEE---EEEECSSSCCCCEEECTTSCEEE
T ss_pred eEECCCCCEEEEECC-CCeEEEEECCCCceE---EeccCCCCCccceEECCCCCeEE
Confidence 999999998887754 478999998754321 22212223346678888886443
No 257
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.63 E-value=0.00037 Score=64.37 Aligned_cols=74 Identities=18% Similarity=0.212 Sum_probs=52.5
Q ss_pred ccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEEEecCCCEEEE
Q 022967 157 SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVALSKDEDYLVV 234 (289)
Q Consensus 157 ~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~~~~d~~~l~v 234 (289)
..+..|..|+++++|+|||+.....-. ...+....+..++.+++.++++..++.+- .-..|++|+||+++|||
T Consensus 473 ~~f~~PDNL~fd~~G~LwI~eDg~~~~-----~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSN-----AGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCC-----SGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCccCCcceEECCCCCEEEEecCCCcc-----cccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 356789999999999999987542100 01111224567899999989888876542 23478999999999998
Q ss_pred E
Q 022967 235 C 235 (289)
Q Consensus 235 ~ 235 (289)
.
T Consensus 548 n 548 (592)
T 3zwu_A 548 G 548 (592)
T ss_dssp E
T ss_pred E
Confidence 7
No 258
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.62 E-value=0.0096 Score=52.76 Aligned_cols=172 Identities=12% Similarity=0.050 Sum_probs=95.8
Q ss_pred EccCCC-EEEEecCCeEEEEe-cCCceEE-eeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEEEEeccCC
Q 022967 84 VDRNGV-LYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTVLASHVNG 156 (289)
Q Consensus 84 ~d~~g~-l~v~~~~g~i~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~~~~~~~~ 156 (289)
+.++++ ++++..++.|..++ .+++... +........ .++++++++.+++ ..+..|..++ .++ +..+...
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--- 351 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY-STIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH--- 351 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC---
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC---
Confidence 344455 45777889999999 4454332 222233344 8899988875555 4435577777 566 3333211
Q ss_pred ccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEe
Q 022967 157 SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE 236 (289)
Q Consensus 157 ~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~ 236 (289)
......+.++ +...++.. ..+.|..+|..++..............++++++++.+..+.
T Consensus 352 --~~~v~~~~~~--~~~l~s~s-----------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 352 --TALVGLLRLS--DKFLVSAA-----------------ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp --SSCEEEEEEC--SSEEEEEE-----------------TTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred --CCcEEEEEEc--CCEEEEEe-----------------CCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 1234566665 44444332 24678888887655443333334456678999999666664
Q ss_pred CCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 237 TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 237 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
.+.|..||+...+... .+..........++.+ +..+.++....+
T Consensus 411 --dg~i~iwd~~~g~~~~--~~~~~~~~~v~~v~~~-~~~l~~~~~~~g 454 (464)
T 3v7d_B 411 --ENQFNIYNLRSGKLVH--ANILKDADQIWSVNFK-GKTLVAAVEKDG 454 (464)
T ss_dssp --TTEEEEEETTTCCEEE--SCTTTTCSEEEEEEEE-TTEEEEEEEETT
T ss_pred --CCeEEEEECCCCcEEe--hhhccCCCcEEEEEec-CCEEEEEEEeCC
Confidence 5799999986543211 1111112233446665 345555544433
No 259
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.60 E-value=0.015 Score=48.39 Aligned_cols=149 Identities=11% Similarity=0.114 Sum_probs=79.1
Q ss_pred cceEEEcc--CCCEE-EEecCCeEEEEe-cCCceE---EeeeecCcCccCeEEcCC--CcEEEE-eCCCceEEEe-CCC-
Q 022967 79 PEDVCVDR--NGVLY-TATRDGWIKRLH-KNGTWE---NWKLIGGDTLLGITTTQE--NEILVC-DADKGLLKVT-EEG- 146 (289)
Q Consensus 79 p~~l~~d~--~g~l~-v~~~~g~i~~~~-~~g~~~---~~~~~~~~p~~gl~~d~~--g~l~v~-~~~~~i~~~~-~~g- 146 (289)
-.++++.+ +|++. .+..++.|..++ .+++.. .+........ .+++.++ |.++++ ..+..+..++ .++
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 35677754 36655 667889999998 444322 2222223344 7888876 655544 4434455555 332
Q ss_pred -eE-EEEeccCCccccCccceEEcCC-------------CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe--
Q 022967 147 -VT-VLASHVNGSRINLADDLIAATD-------------GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-- 209 (289)
Q Consensus 147 -~~-~~~~~~~~~~~~~~~~l~~~~d-------------G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~-- 209 (289)
.. ...... ......+++.|+ ++++++.. ..+.|..+|.++++
T Consensus 135 ~~~~~~~~~h----~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-----------------~D~~v~lwd~~~~~~~ 193 (297)
T 2pm7_B 135 TTSPIIIDAH----AIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----------------ADNLVKIWKYNSDAQT 193 (297)
T ss_dssp CBCCEEEECC----SSCEEEEEECCCC------------CCEEEEEE-----------------TTSCEEEEEEETTTTE
T ss_pred ceeeeeeecc----cCccceEeecCCcccccccCCCCCCcceEEEEc-----------------CCCcEEEEEEcCCCce
Confidence 21 111111 123456777775 33444322 12444444433322
Q ss_pred --EE-EeeCCCCCcceEEEecCC--CEEEEEeCCCCeEEEEEecC
Q 022967 210 --TS-ILLDSLFFANGVALSKDE--DYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 210 --~~-~~~~~~~~p~gl~~~~d~--~~l~v~~~~~~~i~~~~~~~ 249 (289)
.. .+.........++|+|++ ..++++-...+.|..|+++.
T Consensus 194 ~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 11 222233445789999986 34566666678899999865
No 260
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.59 E-value=0.027 Score=47.97 Aligned_cols=182 Identities=14% Similarity=0.144 Sum_probs=98.6
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEecCC-ceEEeeeec---CcCccCeEEcCCCcEEEEeCCCceEEEeCCC--eEEEE
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIG---GDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLA 151 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~~~g-~~~~~~~~~---~~p~~gl~~d~~g~l~v~~~~~~i~~~~~~g--~~~~~ 151 (289)
...+|++..++.+|+....|.|++-...| .++...... ..+..+|++++ +++|++.....+++-.+.| .+.+.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~ 115 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIP 115 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEEESSTTSSCEECC
T ss_pred cEEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEEECCCCCCceECc
Confidence 45667777678888755667776654334 344432211 22222788875 6888876444566654445 44432
Q ss_pred eccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC-CCcceEEEecCCC
Q 022967 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVALSKDED 230 (289)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~-~~p~gl~~~~d~~ 230 (289)
.... .+ ..+..|++.+++++|+... .+.|++-+-.+...+.+.... ....++++++++.
T Consensus 116 ~~~~-~~-~~~~~i~~~~~~~~~~~~~------------------~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~ 175 (327)
T 2xbg_A 116 LDPK-LP-GSPRLIKALGNGSAEMITN------------------VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE 175 (327)
T ss_dssp CCTT-CS-SCEEEEEEEETTEEEEEET------------------TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC
T ss_pred cccC-CC-CCeEEEEEECCCCEEEEeC------------------CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc
Confidence 2100 00 1245677777888887643 256777643344555554322 2345678888877
Q ss_pred EEEEEeCCCCeEEEEEec-CCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCcc
Q 022967 231 YLVVCETFKFRCLKYWLK-GESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVF 285 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~ 285 (289)
+|+... ...+++-+-. +..... ...........++++.+|.+|++...|.
T Consensus 176 -~~~~g~-~G~~~~S~d~gG~tW~~---~~~~~~~~~~~~~~~~~g~~~~~~~~G~ 226 (327)
T 2xbg_A 176 -YVAVSS-RGSFYSTWEPGQTAWEP---HNRTTSRRLHNMGFTPDGRLWMIVNGGK 226 (327)
T ss_dssp -EEEEET-TSSEEEEECTTCSSCEE---EECCSSSCEEEEEECTTSCEEEEETTTE
T ss_pred -EEEEEC-CCcEEEEeCCCCCceeE---CCCCCCCccceeEECCCCCEEEEeCCce
Confidence 554433 3556665422 222221 1111122334577788888888876544
No 261
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.58 E-value=0.00012 Score=64.00 Aligned_cols=142 Identities=18% Similarity=0.179 Sum_probs=61.1
Q ss_pred EEccCCCEEEEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEe-CCCceEEEe-CCC-eEEEEeccCCcc
Q 022967 83 CVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG-VTVLASHVNGSR 158 (289)
Q Consensus 83 ~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~-~~~~i~~~~-~~g-~~~~~~~~~~~~ 158 (289)
+++ ++.||+++.+|.|+.+| .+|+....... +... ...+..+|.+|++. ....++.+| .+| ....... ....
T Consensus 6 ~v~-~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~-~~~~ 81 (369)
T 2hz6_A 6 TLP-ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF-TIPE 81 (369)
T ss_dssp --C-TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSC-CHHH
T ss_pred eee-CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec-cCcc
Confidence 454 67899999999999999 67876533332 3333 33333467777764 345688888 567 3221110 0000
Q ss_pred ccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCC
Q 022967 159 INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF 238 (289)
Q Consensus 159 ~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~ 238 (289)
.. ....++..++.+|++.. .+.|+.+|+++|+..-.... .....++|+++.+|++..
T Consensus 82 ~~-~~sp~~~~~~~v~~g~~------------------dg~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~~- 138 (369)
T 2hz6_A 82 LV-QASPCRSSDGILYMGKK------------------QDIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGRT- 138 (369)
T ss_dssp HH-TTCSCC-----CCCCEE------------------EEEEEEECCC-------------------------EEEEEE-
T ss_pred cc-ccCceEecCCEEEEEeC------------------CCEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEec-
Confidence 00 01112223567776532 36799999987765322111 112344567777888743
Q ss_pred CCeEEEEEecCCC
Q 022967 239 KFRCLKYWLKGES 251 (289)
Q Consensus 239 ~~~i~~~~~~~~~ 251 (289)
.+.|+.+|..+.+
T Consensus 139 dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 139 EYTITMYDTKTRE 151 (369)
T ss_dssp EEEEECCCSSSSS
T ss_pred CCEEEEEECCCCC
Confidence 4678888875433
No 262
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.56 E-value=0.004 Score=52.74 Aligned_cols=132 Identities=8% Similarity=0.009 Sum_probs=83.7
Q ss_pred CCCEEEEe----cCCeEEEEecCCc-eEEeeeecCcCccCeEEcCCCcEEEEeCC-CceEEEeCCC--eEEEEeccCCcc
Q 022967 87 NGVLYTAT----RDGWIKRLHKNGT-WENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG--VTVLASHVNGSR 158 (289)
Q Consensus 87 ~g~l~v~~----~~g~i~~~~~~g~-~~~~~~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~~~g--~~~~~~~~~~~~ 158 (289)
++.||..+ .+..|++++.+|+ .+.+..... . .+.++ .+.||+++.+ ..|++++.+| .+.+.. +
T Consensus 115 g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~-~~~~~-g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~-- 185 (302)
T 3s25_A 115 GNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--F-TCNTS-DRYFYYNNPKNGQLYRYDTASQSEALFYD---C-- 185 (302)
T ss_dssp TTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--C-CSEEE-TTEEEEECTTTCCEEEEETTTTEEEEEEC---S--
T ss_pred CCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--e-EeeEE-CCEEEEEeCCCceEEEEECCCCCEEEEeC---C--
Confidence 55777544 4568999997774 333333222 2 33333 3468888763 5699999555 454432 1
Q ss_pred ccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEE-e
Q 022967 159 INLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVC-E 236 (289)
Q Consensus 159 ~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~-~ 236 (289)
.....+.|+ +.||+++.. ....|++.+.+++..+++..... ..+++++++||++ +
T Consensus 186 ---~~~~~~~P~g~~iy~t~~~----------------~~~~I~~~~ldG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 186 ---NCYKPVVLDDTNVYYMDVN----------------RDNAIVHVNINNPNPVVLTEANI----EHYNVYGSLIFYQRG 242 (302)
T ss_dssp ---CEEEEEEEETTEEEEEEGG----------------GTTEEEEECSSSCCCEECSCSCE----EEEEEETTEEEEEEC
T ss_pred ---CccceeeecCCEEEEEEcC----------------CCcEEEEEECCCCCeEEEeCCCc----ceEEECCCEEEEEEC
Confidence 112345565 579998742 12579999999877666643221 2478889999997 5
Q ss_pred CCCCeEEEEEecCC
Q 022967 237 TFKFRCLKYWLKGE 250 (289)
Q Consensus 237 ~~~~~i~~~~~~~~ 250 (289)
.....|++.+++|.
T Consensus 243 ~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 243 GDNPALCVVKNDGT 256 (302)
T ss_dssp SSSCEEEEEETTSC
T ss_pred CCCcEEEEEECCCC
Confidence 55688999999885
No 263
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.56 E-value=0.0039 Score=52.94 Aligned_cols=146 Identities=8% Similarity=0.011 Sum_probs=84.5
Q ss_pred CcceEEEccCCC-EEEEe-cC--C--eEEEEec-CCceEEeeeecCcCccCeEEcCCCc-EEEEeC--------------
Q 022967 78 GPEDVCVDRNGV-LYTAT-RD--G--WIKRLHK-NGTWENWKLIGGDTLLGITTTQENE-ILVCDA-------------- 135 (289)
Q Consensus 78 ~p~~l~~d~~g~-l~v~~-~~--g--~i~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~-------------- 135 (289)
....+++.|+|+ |++.. .. + .|+.++. .|+...+..... .. .+++.+||+ |+++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 355678999886 44333 22 3 4888884 455544443333 55 889988886 555531
Q ss_pred -------------CCceEEEe-CCC-e-EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCE
Q 022967 136 -------------DKGLLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGK 199 (289)
Q Consensus 136 -------------~~~i~~~~-~~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~ 199 (289)
...|+.++ .+| . +.+.. + ....+.+.||| ++++..... ..........
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~~~~~~--------~~~~~~~~~~ 201 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVNVPHRE--------IIPQYFKFWD 201 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEEEECCC--------SSCCSSCCEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEEEeccc--------cccccccccc
Confidence 13478888 556 5 55533 1 35678999999 766542200 0000001347
Q ss_pred EEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCC-------CCeEEEEE
Q 022967 200 LLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF-------KFRCLKYW 246 (289)
Q Consensus 200 i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~-------~~~i~~~~ 246 (289)
|+.+| +++...+... .. . ..++|||++|++.... ...|+.++
T Consensus 202 l~~~d--~~~~~~l~~~-~~-~-~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 202 IYIWE--DGKEEKMFEK-VS-F-YAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEE--TTEEEEEEEE-ES-E-EEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEEeC--CCceEEeccC-cc-e-eeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 89998 5666655443 22 2 2348999988766532 35788887
No 264
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0093 Score=58.21 Aligned_cols=151 Identities=7% Similarity=-0.018 Sum_probs=91.6
Q ss_pred CcceEEEccCCC-EEEEecCCeEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEE-EeCCCceEEEe-CCC-eEEEEe
Q 022967 78 GPEDVCVDRNGV-LYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-VTVLAS 152 (289)
Q Consensus 78 ~p~~l~~d~~g~-l~v~~~~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v-~~~~~~i~~~~-~~g-~~~~~~ 152 (289)
.-.++++.+ |+ |..+..++.|..|+ .+++........+... .++++++++..+ +.....|..+| ..+ ...+..
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 346788888 66 66777899999999 4555332222233445 899999987544 45445577777 555 432211
Q ss_pred -------ccCCccccCccceEEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC-------
Q 022967 153 -------HVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL------- 217 (289)
Q Consensus 153 -------~~~~~~~~~~~~l~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~------- 217 (289)
.........+.++++.|++ .+.++.. ..+.| .+|.++++........
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~-----------------~dg~v-lWd~~~~~~~~~~~~~~~~g~~~ 199 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY-----------------EYVTL-TYSLVENEIKQSFIYELPPFAPG 199 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC-----------------SSCEE-EEETTTTEEEEEECCCBCTTCCC
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEe-----------------CCCcE-EEECCCCceEEEEecccCCcCCC
Confidence 0001112356789999964 4433322 23667 8888766644332211
Q ss_pred ------------CCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 218 ------------FFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 218 ------------~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
.....++|+||+++|..+ ...+.|..||+..
T Consensus 200 ~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 200 GDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDANS 242 (902)
T ss_dssp STTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEETTT
T ss_pred cccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCC
Confidence 235788999999955555 5568899999754
No 265
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0072 Score=57.70 Aligned_cols=182 Identities=13% Similarity=0.139 Sum_probs=97.2
Q ss_pred CcceEEEccC--CCEE-EEecCCeEEEEe-cCCceEEee---eecCcCccCeEEcCC--CcEEEE-eCCCceEEEe-CCC
Q 022967 78 GPEDVCVDRN--GVLY-TATRDGWIKRLH-KNGTWENWK---LIGGDTLLGITTTQE--NEILVC-DADKGLLKVT-EEG 146 (289)
Q Consensus 78 ~p~~l~~d~~--g~l~-v~~~~g~i~~~~-~~g~~~~~~---~~~~~p~~gl~~d~~--g~l~v~-~~~~~i~~~~-~~g 146 (289)
.-.++++.++ |++. ++..+|.|..++ .+++..... ....... .+++.++ |.++++ .....+..++ ..+
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3456788765 6655 677889999998 455422221 2223344 8899887 765554 4434466666 333
Q ss_pred --eEEEEeccCCccccCccceEEcC-------------CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC---
Q 022967 147 --VTVLASHVNGSRINLADDLIAAT-------------DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--- 208 (289)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~l~~~~-------------dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--- 208 (289)
......... ......+++.| +|.+.++... .+.|..+|..++
T Consensus 134 ~~~~~~~~~~~---~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-----------------dg~I~iwd~~~~~~~ 193 (753)
T 3jro_A 134 GTTSPIIIDAH---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQT 193 (753)
T ss_dssp SCCCCEEEECC---SSCEEEEEECCCC---------CGGGCCEEEEET-----------------TSCEEEEEEETTTTE
T ss_pred CCcceeEeecC---CCceEEEEecCcccccccccccCCCCCEEEEEEC-----------------CCeEEEEeccCCccc
Confidence 211111100 12456777777 4554444321 355656654433
Q ss_pred -eEEE-eeCCCCCcceEEEecC---CCEEEEEeCCCCeEEEEEecCCCCcceeeee--ccCCCCCCceeeCCCCCEEEEE
Q 022967 209 -ETSI-LLDSLFFANGVALSKD---EDYLVVCETFKFRCLKYWLKGESKEQTEIFV--ENLPGGPDNIKLAPDGSFWIAI 281 (289)
Q Consensus 209 -~~~~-~~~~~~~p~gl~~~~d---~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~p~~i~~d~~G~lwv~~ 281 (289)
.... +.........++|+|+ ++.++.+ ...+.|..||+............ ....+....++...+|.+.++.
T Consensus 194 ~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASV-SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred ceeeeeecCCCCcEEEEEeccCCCCCCEEEEE-ecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 1111 2222344578999999 6655444 55688999998754211111111 1122345567888888654443
No 266
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.50 E-value=0.03 Score=46.53 Aligned_cols=152 Identities=16% Similarity=0.092 Sum_probs=84.8
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEecCC---c-eEEeeeecCcCccCeEEcC--CCcEEEEe-CCCceEEEe-CCC-e
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNG---T-WENWKLIGGDTLLGITTTQ--ENEILVCD-ADKGLLKVT-EEG-V 147 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~~g---~-~~~~~~~~~~p~~gl~~d~--~g~l~v~~-~~~~i~~~~-~~g-~ 147 (289)
.-.+++++++|+.. ++..++.|..++.++ + ...+....+... .++|.+ +|+++++. .+..+..++ .++ .
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 34578899988766 666889899998432 2 222322233344 788854 36666554 334455566 444 2
Q ss_pred EEEEeccCCccccCccceEEcCC--CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe---EEEeeCCCCCcce
Q 022967 148 TVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFANG 222 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~d--G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~---~~~~~~~~~~p~g 222 (289)
..+.. ..+ .......+++.|+ |.+.++... .+.|..+|.+++. ...+.......+.
T Consensus 90 ~~~~~-~~~-h~~~v~~v~~~p~~~g~~l~s~s~-----------------d~~v~~wd~~~~~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 90 SQIAV-HAV-HSASVNSVQWAPHEYGPMLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp CCCEE-ECC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred EEEEE-eec-CCCceeEEEeCcCCCCcEEEEEEC-----------------CCcEEEEEecCCCceeeeeeecccCccce
Confidence 21111 011 0124678899886 765554322 3566666655332 1222222334567
Q ss_pred EEEecC-------------CCEEEEEeCCCCeEEEEEecCC
Q 022967 223 VALSKD-------------EDYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 223 l~~~~d-------------~~~l~v~~~~~~~i~~~~~~~~ 250 (289)
++|+|+ ++ ++++-...+.|..||+...
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~ 190 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSD 190 (297)
T ss_dssp EEECCCC------------CC-EEEEEETTSCEEEEEEETT
T ss_pred EeecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCC
Confidence 788886 34 4455455688999988653
No 267
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.50 E-value=0.014 Score=50.26 Aligned_cols=137 Identities=15% Similarity=0.172 Sum_probs=82.0
Q ss_pred EEEec---CCeEEEEec---CCceEEeee------e-cCcCccCeEE--cC-CCc--EEEEeCCCceEE--Ee--CCC-e
Q 022967 91 YTATR---DGWIKRLHK---NGTWENWKL------I-GGDTLLGITT--TQ-ENE--ILVCDADKGLLK--VT--EEG-V 147 (289)
Q Consensus 91 ~v~~~---~g~i~~~~~---~g~~~~~~~------~-~~~p~~gl~~--d~-~g~--l~v~~~~~~i~~--~~--~~g-~ 147 (289)
|+++. +++|..++. ++.+..+.. . ...|. |+++ ++ .|. +||.+....+.. +. .+| +
T Consensus 90 ~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~py-Glcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 90 AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVY-GFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI 168 (355)
T ss_dssp EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCC-CEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCee-EEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence 45554 477777742 345555422 1 15688 9998 65 354 566655443433 43 344 2
Q ss_pred -EEEEeccCCccccCccceEEcC-CCcEEEeeCCCccCccccccccceecCCCEEEEEeCC--C---CeEEEee--CCC-
Q 022967 148 -TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS--L---NETSILL--DSL- 217 (289)
Q Consensus 148 -~~~~~~~~~~~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~---~~~~~~~--~~~- 217 (289)
..++..+... ..+.++++|+ .|.||+++.. .+||+|+.+ + ++..... ..+
T Consensus 169 ~~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~eEd------------------~GIw~~da~p~~~~~~~~v~~~~~g~l~ 228 (355)
T 3amr_A 169 SGKKVRAFKMN--SQTEGMAADDEYGRLYIAEED------------------EAIWKFSAEPDGGSNGTVIDRADGRHLT 228 (355)
T ss_dssp EEEEEEEEECS--SCEEEEEEETTTTEEEEEETT------------------TEEEEEECSTTSCSCCEEEEEBSSSSBC
T ss_pred cceEEEEecCC--CCcceEEEcCCCCeEEEeccc------------------ceEEEEeCCcCCCCCceEEEEecCCccc
Confidence 2222222111 2577899997 5799999753 459999944 3 2222222 222
Q ss_pred CCcceEEEe--cCCC-EEEEEeCCCCeEEEEEec
Q 022967 218 FFANGVALS--KDED-YLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 218 ~~p~gl~~~--~d~~-~l~v~~~~~~~i~~~~~~ 248 (289)
..+.||++. ++++ +|++++.+++.+.+|+..
T Consensus 229 aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 229 RDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp SCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 367899985 4555 899999898999999986
No 268
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.47 E-value=0.033 Score=49.22 Aligned_cols=173 Identities=10% Similarity=0.034 Sum_probs=92.2
Q ss_pred eEEEccCCCEEEEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEEeccC
Q 022967 81 DVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLASHVN 155 (289)
Q Consensus 81 ~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~~~~~ 155 (289)
++.++ ++.|+++..+|.|..++ .+++...... ..+... .+++.+++.++.+..+..+..++ .++ ...+.. ..
T Consensus 127 ~~~~~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~ 203 (464)
T 3v7d_B 127 CLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG-HN 203 (464)
T ss_dssp EEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSTTEEEEEETTSCEEEEETTTTEEEEEECC-CS
T ss_pred EEEEC-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEE-EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECC-CC
Confidence 45554 34566778899999999 5565433222 233344 88898877565566556677777 666 333321 11
Q ss_pred CccccCccceEEc--CCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE----------------------
Q 022967 156 GSRINLADDLIAA--TDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS---------------------- 211 (289)
Q Consensus 156 ~~~~~~~~~l~~~--~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~---------------------- 211 (289)
.....+++. +++.+.++... .+.|..+|..++...
T Consensus 204 ----~~v~~l~~~~~~~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 204 ----STVRCLDIVEYKNIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp ----SCEEEEEEEESSSCEEEEEEET-----------------TSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred ----CccEEEEEecCCCCCEEEEEcC-----------------CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 234556666 46654444322 245555555433211
Q ss_pred -EeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEe
Q 022967 212 -ILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 212 -~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
....+.. ..-.+++++++.++.+. ..+.|..||+..... ...+. ........++.+.+|++.++..
T Consensus 263 ~~~~~~~~-~~v~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 263 VGVLRGHM-ASVRTVSGHGNIVVSGS-YDNTLIVWDVAQMKC--LYILS-GHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EEEECCCS-SCEEEEEEETTEEEEEE-TTSCEEEEETTTTEE--EEEEC-CCSSCEEEEEEETTTTEEEEEE
T ss_pred EEEccCcc-ceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcE--EEEec-CCCCCEEEEEEcCCCCEEEEEe
Confidence 1111111 11235577888666664 457899998764321 11121 2223345577777776555443
No 269
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.45 E-value=0.044 Score=46.96 Aligned_cols=201 Identities=8% Similarity=-0.023 Sum_probs=97.2
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEecCCceEEeeeecCcCccCeEEcCCCcEE-EEeCC-CceEEEe-CCC--eEEEE
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEIL-VCDAD-KGLLKVT-EEG--VTVLA 151 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~l~-v~~~~-~~i~~~~-~~g--~~~~~ 151 (289)
..-.++++.++|.+.+...++.+..++.+.............. .+++..++++. ++..+ ..+..+| .++ +..+.
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~ 98 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK 98 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence 3457899999999875544455777773322111111112222 35555555543 44333 3566667 556 33322
Q ss_pred eccCCcc---ccCccceEEcCCCcEEEeeCCCc-cCcccc-----------ccccce-ecCCCEEEEEeCCCCe------
Q 022967 152 SHVNGSR---INLADDLIAATDGSIYFSVASTK-FGLHNW-----------GLDLLE-AKPHGKLLKYDPSLNE------ 209 (289)
Q Consensus 152 ~~~~~~~---~~~~~~l~~~~dG~lyv~~~~~~-~~~~~~-----------~~~~~~-~~~~g~i~~~~~~~~~------ 209 (289)
. ...- ...+..+.+..++.+++-+.... -..... ....+. +...|.|..+|..+++
T Consensus 99 ~--~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~ 176 (355)
T 3vu4_A 99 V--DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQD 176 (355)
T ss_dssp C--SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC--------
T ss_pred C--CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccc
Confidence 1 1100 00122333334455554433211 000000 000011 3445677777876543
Q ss_pred -----------EEEeeCCCCCcceEEEecCCCEEEEEeCCCCe-EEEEEecCCCCcceeeeecc-CCCCCCceeeCCCCC
Q 022967 210 -----------TSILLDSLFFANGVALSKDEDYLVVCETFKFR-CLKYWLKGESKEQTEIFVEN-LPGGPDNIKLAPDGS 276 (289)
Q Consensus 210 -----------~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~-i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~ 276 (289)
...+.........++|+||++.|..+ ...+. |..||+..... ...+... .......+++.++|+
T Consensus 177 ~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~-s~d~~~v~iwd~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 177 QGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC-SQDGTIIRVFKTEDGVL--VREFRRGLDRADVVDMKWSTDGS 253 (355)
T ss_dssp ----------CCEEECCCSSCEEEEEECTTSSEEEEE-ETTCSEEEEEETTTCCE--EEEEECTTCCSCEEEEEECTTSC
T ss_pred ccccccccCcccEEEEccCCceEEEEECCCCCEEEEE-eCCCCEEEEEECCCCcE--EEEEEcCCCCCcEEEEEECCCCC
Confidence 33333334445789999999955555 45576 88898764322 1222211 223456688888887
Q ss_pred EEEEEeC
Q 022967 277 FWIAILQ 283 (289)
Q Consensus 277 lwv~~~~ 283 (289)
+.++...
T Consensus 254 ~l~s~s~ 260 (355)
T 3vu4_A 254 KLAVVSD 260 (355)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 6665543
No 270
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.45 E-value=0.0023 Score=59.10 Aligned_cols=124 Identities=14% Similarity=0.232 Sum_probs=74.5
Q ss_pred cccCccceEEcC-CCcEEEeeCCCccCccc----cccccceecCCCEEEEEeCCCCe-------EEEee-----------
Q 022967 158 RINLADDLIAAT-DGSIYFSVASTKFGLHN----WGLDLLEAKPHGKLLKYDPSLNE-------TSILL----------- 214 (289)
Q Consensus 158 ~~~~~~~l~~~~-dG~lyv~~~~~~~~~~~----~~~~~~~~~~~g~i~~~~~~~~~-------~~~~~----------- 214 (289)
++..+.++.++| +|.+||+.........+ ........+..|.|++++++++. .+.+.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 456788999997 78999987642111000 00111223456899999875331 22221
Q ss_pred -----------CCCCCcceEEEecCCCEEEEEeCC------------CCeEEEEEecCCCCcceeeeecc-CCCCCCcee
Q 022967 215 -----------DSLFFANGVALSKDEDYLVVCETF------------KFRCLKYWLKGESKEQTEIFVEN-LPGGPDNIK 270 (289)
Q Consensus 215 -----------~~~~~p~gl~~~~d~~~l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~ 270 (289)
..+.+|..|+|+++|+ |||++.+ ++.++.++... +....|... ......|++
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~---g~~~rf~~~P~gaE~TG~~ 537 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT---GEIRRFMVGPIGCEVTGIS 537 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTT---CCEEEEEECCTTCEEEEEE
T ss_pred ccccccccCCCCCccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCC---CeEEEEEeCCCCccCcCee
Confidence 1256789999999998 8888764 34566665432 333444422 224556788
Q ss_pred eCCCC-CEEEEEeCcc
Q 022967 271 LAPDG-SFWIAILQVF 285 (289)
Q Consensus 271 ~d~~G-~lwv~~~~g~ 285 (289)
+.+|| +|||.....|
T Consensus 538 fspDg~tlfvniQHPG 553 (592)
T 3zwu_A 538 FSPDQKTLFVGIQHPG 553 (592)
T ss_dssp ECTTSSEEEEEEESTT
T ss_pred ECCCCCEEEEEEECCC
Confidence 88887 6888876544
No 271
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.45 E-value=0.0067 Score=53.63 Aligned_cols=184 Identities=10% Similarity=0.037 Sum_probs=93.2
Q ss_pred ceEEEccCCCEE-EEecCCeEEEEecCCce-EEeeeecCcCccCeEEcCCCc-EEEE-eCCCceEEEe-CCC--eEEEEe
Q 022967 80 EDVCVDRNGVLY-TATRDGWIKRLHKNGTW-ENWKLIGGDTLLGITTTQENE-ILVC-DADKGLLKVT-EEG--VTVLAS 152 (289)
Q Consensus 80 ~~l~~d~~g~l~-v~~~~g~i~~~~~~g~~-~~~~~~~~~p~~gl~~d~~g~-l~v~-~~~~~i~~~~-~~g--~~~~~~ 152 (289)
.+++++++|.+. ++..+|.|..++.+++. ..+........ .+++.+++. ++++ ..+..|..+| ..+ ...+..
T Consensus 213 ~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~-~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~ 291 (435)
T 4e54_B 213 CSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVT-HVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY 291 (435)
T ss_dssp CCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEE-EEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSB
T ss_pred EEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEE-eeeecCCCceEEEEecCcceeeEEecccccccceEEE
Confidence 457777877765 66678888888865542 22222223344 889988775 5544 3334455556 332 211111
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-------CCCcceEEE
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-------LFFANGVAL 225 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-------~~~p~gl~~ 225 (289)
. . .-......++++|||...++... .+.|..+|..+++....... ...+....+
T Consensus 292 ~-~-~h~~~v~~~~~spdg~~l~s~~~-----------------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 292 S-L-PHRHPVNAACFSPDGARLLTTDQ-----------------KSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp C-C-BCSSCEEECCBCTTSSEEEEEES-----------------SSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred e-e-eccccccceeECCCCCeeEEEcC-----------------CCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence 0 0 01124567889999986665432 35677777765543221110 112233456
Q ss_pred ecCCCEEEEEeC-----------CCCeEEEEEecCCCCcceeeeeccCCCCCCce-eeCCCCCEEEEEeCcc
Q 022967 226 SKDEDYLVVCET-----------FKFRCLKYWLKGESKEQTEIFVENLPGGPDNI-KLAPDGSFWIAILQVF 285 (289)
Q Consensus 226 ~~d~~~l~v~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i-~~d~~G~lwv~~~~g~ 285 (289)
++++..+.++.. ..+.|..||...... ...+..........+ ++.++|.+.++..++.
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~--~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~ 422 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM--MCQLYDPESSGISSLNEFNPMGDTLASAMGYH 422 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE--EEEECCSSCCCCCCEEEECTTSSCEEEECSSE
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE--EEEEeCCCCCcEEEEEEECCCCCEEEEEcCCc
Confidence 666664444422 224577777653321 111211111122233 4677787766654443
No 272
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.44 E-value=0.0074 Score=56.97 Aligned_cols=153 Identities=10% Similarity=0.078 Sum_probs=84.0
Q ss_pred ceEEEccCCCEE--EEecC----CeEEEEe-cCCceEEeeeecCc-CccCeEEcCCCc-EEEEeCCCc------------
Q 022967 80 EDVCVDRNGVLY--TATRD----GWIKRLH-KNGTWENWKLIGGD-TLLGITTTQENE-ILVCDADKG------------ 138 (289)
Q Consensus 80 ~~l~~d~~g~l~--v~~~~----g~i~~~~-~~g~~~~~~~~~~~-p~~gl~~d~~g~-l~v~~~~~~------------ 138 (289)
.++++.|||+.. ..+.. ..|+.++ .+|+.......... .. ++++.+||+ |+.+.....
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 456888898854 22222 4688888 44543201111111 24 899999986 444443222
Q ss_pred -eEEEe-CCC-e-EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe
Q 022967 139 -LLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL 213 (289)
Q Consensus 139 -i~~~~-~~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 213 (289)
|++.+ .++ . ..+.....+.. ....++.+++||+ |.++.... .....|+.++..+++...+
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~~--------------~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDP-TTFLQSDLSRDGKYLFVYILRG--------------WSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCT-TCEEEEEECTTSCCEEEEEEET--------------TTEEEEEEECTTCSSCEEE
T ss_pred EEEEEECCCCchhceEEEecCCCC-EEEEEEEECCCCCEEEEEEeCC--------------CCceEEEEEcCCCCceEEe
Confidence 88887 444 2 22222211111 2345788999995 55543210 0124688887766666655
Q ss_pred eCCCCCcceEEEecCCCEEEEEeC---CCCeEEEEEecCC
Q 022967 214 LDSLFFANGVALSKDEDYLVVCET---FKFRCLKYWLKGE 250 (289)
Q Consensus 214 ~~~~~~p~gl~~~~d~~~l~v~~~---~~~~i~~~~~~~~ 250 (289)
...........+ ++++ +|+... .+.+|+++++++.
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 544333344444 6777 777644 3578999988654
No 273
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.0025 Score=58.49 Aligned_cols=132 Identities=13% Similarity=0.051 Sum_probs=84.8
Q ss_pred cceEEEccCCCEE-EEecCCeEEEEec-CCce--------EEeeee----cCcCccCeEEcCCCcEEEEeCCCceEEEe-
Q 022967 79 PEDVCVDRNGVLY-TATRDGWIKRLHK-NGTW--------ENWKLI----GGDTLLGITTTQENEILVCDADKGLLKVT- 143 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~~g~i~~~~~-~g~~--------~~~~~~----~~~p~~gl~~d~~g~l~v~~~~~~i~~~~- 143 (289)
-.++++.|+|++. ++..+|.|..++. ++.. ..+... ..... .+++.++| +..+..++.+..++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE-EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE-EEEEcCCc-EEEEeCCCeEEEEEC
Confidence 5579999988755 7788999999993 4432 333211 12445 89999999 66666667788888
Q ss_pred CCC-eE----EEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-CCC
Q 022967 144 EEG-VT----VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSL 217 (289)
Q Consensus 144 ~~g-~~----~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-~~~ 217 (289)
.++ .. .+.. + ......++++. |...++.. .+.|..+|.++++...+. ...
T Consensus 210 ~~~~~~~~~~tL~~---~-h~~~V~svaFs--g~~LASa~------------------~~tIkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 210 SASSHQPVSRMIQN---A-SRRKITDLKIV--DYKVVLTC------------------PGYVHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp CSSSSCCCEEEEEC---C-CSSCCCCEEEE--TTEEEEEC------------------SSEEEEEETTTTEEEEEECSCC
T ss_pred CCCccccceeeecc---c-ccCcEEEEEEE--CCEEEEEe------------------CCeEEEEECCCCeEEEEEcCCC
Confidence 333 31 2211 1 11357788887 44444432 267889998877775554 444
Q ss_pred CCcceEEE--ecCCCEEEEEe
Q 022967 218 FFANGVAL--SKDEDYLVVCE 236 (289)
Q Consensus 218 ~~p~gl~~--~~d~~~l~v~~ 236 (289)
....++++ ++|+..+.++.
T Consensus 266 ~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 266 ENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp SCCCEEEETTCSSCEEEEECS
T ss_pred ceEEEEEeeeCCCCCEEEEEc
Confidence 45678999 99987666664
No 274
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.42 E-value=0.042 Score=46.00 Aligned_cols=178 Identities=16% Similarity=0.103 Sum_probs=95.9
Q ss_pred ceEEEccCCC-EEEEecCCeEEEEecCCceEEeeee---cCcCccCeEEcCCC--cEEEEe-CCCceEEEe-CCC--eEE
Q 022967 80 EDVCVDRNGV-LYTATRDGWIKRLHKNGTWENWKLI---GGDTLLGITTTQEN--EILVCD-ADKGLLKVT-EEG--VTV 149 (289)
Q Consensus 80 ~~l~~d~~g~-l~v~~~~g~i~~~~~~g~~~~~~~~---~~~p~~gl~~d~~g--~l~v~~-~~~~i~~~~-~~g--~~~ 149 (289)
..+...+++. |+.+..++.+..++..+........ ..... .+++..++ .++++. ....+..++ .++ ...
T Consensus 132 ~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 132 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS-CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEE-EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCccc-ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 3345555444 4456677777777743332221111 11222 55565443 455543 334466667 555 222
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCC
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~ 229 (289)
+.. . ......+++.|+|.+.++... .+.|..+|..+.+.............+++++++
T Consensus 211 ~~~-h----~~~v~~~~~s~~~~~l~s~s~-----------------Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 211 HIG-H----TGYLNTVTVSPDGSLCASGGK-----------------DGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp ECC-C----SSCEEEEEECTTSSEEEEEET-----------------TCEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred ecC-C----CCcEEEEEECCCCCEEEEEeC-----------------CCeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 211 1 124678999999987766432 467888888766654444444556778899988
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcc-ee--ee---eccCCCCCCceeeCCCCCEEEEEe
Q 022967 230 DYLVVCETFKFRCLKYWLKGESKEQ-TE--IF---VENLPGGPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~-~~--~~---~~~~~~~p~~i~~d~~G~lwv~~~ 282 (289)
..+..+ ..+.|..||+.+..... .. .. ..........+++.++|++.++..
T Consensus 269 ~~~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 269 YWLCAA--TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp SEEEEE--ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred ceeecc--CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 744333 35789999876542211 00 00 001112334577888887665543
No 275
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.39 E-value=0.02 Score=49.28 Aligned_cols=138 Identities=12% Similarity=0.054 Sum_probs=79.3
Q ss_pred CCeEEEEe-cCCceEEeeeecCcCccCeEEcC-CCc-EEEEeCC------CceEEEe-CCC-eEEEEeccCCccccCccc
Q 022967 96 DGWIKRLH-KNGTWENWKLIGGDTLLGITTTQ-ENE-ILVCDAD------KGLLKVT-EEG-VTVLASHVNGSRINLADD 164 (289)
Q Consensus 96 ~g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~-~g~-l~v~~~~------~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~ 164 (289)
...|+.++ .+|+...+........ .+.+.+ +|. |+++... ..|+.++ ..+ .+.+... .....+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~-~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLG-HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH---AEGESCTH 242 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEE-EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC---CTTEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcccc-cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc---CCCccccc
Confidence 34688888 4566555444333344 678877 665 5554322 3588888 444 4443221 11123556
Q ss_pred eEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEec-CCCEEEEEeC-----
Q 022967 165 LIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSK-DEDYLVVCET----- 237 (289)
Q Consensus 165 l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~-d~~~l~v~~~----- 237 (289)
+++.|||+ |++.... .....+.|+.+|.++++...+.... ... +++++ |++.++.+..
T Consensus 243 ~~~spdg~~l~~~~~~-------------~~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYF-------------KGQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEECTTSSCEEEEEEE-------------TTTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC---
T ss_pred eEECCCCCEEEEEecC-------------CCCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCccee
Confidence 79999996 6555321 0011134999998877765543211 122 78999 9996655431
Q ss_pred ----------CCCeEEEEEecCCCC
Q 022967 238 ----------FKFRCLKYWLKGESK 252 (289)
Q Consensus 238 ----------~~~~i~~~~~~~~~~ 252 (289)
+...|+++|+++...
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBC
T ss_pred eccccccccCCCCcEEEEecccCce
Confidence 346899999876443
No 276
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.38 E-value=0.012 Score=56.01 Aligned_cols=169 Identities=8% Similarity=-0.003 Sum_probs=88.4
Q ss_pred eEEEccCCCE-EEEecC---------CeEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCCCceEEEe-CCC-
Q 022967 81 DVCVDRNGVL-YTATRD---------GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG- 146 (289)
Q Consensus 81 ~l~~d~~g~l-~v~~~~---------g~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g- 146 (289)
++++.|||+. .++..+ +.++.++ .+|+...+....+... ..++.+||+ |.++ ..+.|+.++ .+|
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~-~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYV-WNNDIYVKIEPNLP 143 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEE-ETTEEEEESSTTSC
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEE-ECCeEEEEECCCCc
Confidence 3778898874 444432 5667888 4555544333233344 678889986 4334 346688888 555
Q ss_pred eEEEEecc-CCcc-------------ccCccceEEcCCCc-EEEeeC-CCccCcccc----------c--c-----ccce
Q 022967 147 VTVLASHV-NGSR-------------INLADDLIAATDGS-IYFSVA-STKFGLHNW----------G--L-----DLLE 193 (289)
Q Consensus 147 ~~~~~~~~-~~~~-------------~~~~~~l~~~~dG~-lyv~~~-~~~~~~~~~----------~--~-----~~~~ 193 (289)
...+.... .... +....++.+.|||+ |.+... .+....... . . ..-.
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 54443211 0000 12334688999996 544321 110000000 0 0 0001
Q ss_pred ecCCCEEEEEeCCC---C---eEEEeeC------CCCCcceEEEecCCCEEE-EEeCCC--CeEEEEEecCCC
Q 022967 194 AKPHGKLLKYDPSL---N---ETSILLD------SLFFANGVALSKDEDYLV-VCETFK--FRCLKYWLKGES 251 (289)
Q Consensus 194 ~~~~g~i~~~~~~~---~---~~~~~~~------~~~~p~gl~~~~d~~~l~-v~~~~~--~~i~~~~~~~~~ 251 (289)
......|+.+|.++ + +...+.. .......++|+||++.++ +..+.. ..|+.+|+++.+
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 12223688899887 6 4444432 222345678999998433 333332 268888887643
No 277
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.36 E-value=0.019 Score=48.60 Aligned_cols=95 Identities=11% Similarity=0.081 Sum_probs=56.2
Q ss_pred cCCcceEEEccC---CCE-EEEecCCeEEEEec-C-CceE--EeeeecCcCccCeEEcCCCcEEEE-eCCCceEEEe-CC
Q 022967 76 LNGPEDVCVDRN---GVL-YTATRDGWIKRLHK-N-GTWE--NWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EE 145 (289)
Q Consensus 76 ~~~p~~l~~d~~---g~l-~v~~~~g~i~~~~~-~-g~~~--~~~~~~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~ 145 (289)
-..-.++++.++ |++ +++..+|.|..++. + +... .+........ .+++.++++++++ ..+..+..++ .+
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 345677899987 454 47778899999983 3 4432 2222334445 8999998875554 4434566677 55
Q ss_pred C-eEEEEeccCCccccCccceEE--cCCCcEEEe
Q 022967 146 G-VTVLASHVNGSRINLADDLIA--ATDGSIYFS 176 (289)
Q Consensus 146 g-~~~~~~~~~~~~~~~~~~l~~--~~dG~lyv~ 176 (289)
+ ...+... . .....+++ .+++.++++
T Consensus 118 ~~~~~~~~~-~----~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 118 NQAIQIAQH-D----APVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp TEEEEEEEC-S----SCEEEEEEEECSSCEEEEE
T ss_pred CCceeeccc-c----CceEEEEEEeCCCCCEEEE
Confidence 5 3332221 1 23456666 677764443
No 278
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.34 E-value=0.025 Score=53.79 Aligned_cols=153 Identities=11% Similarity=0.023 Sum_probs=83.2
Q ss_pred eEEEccCCCEE-E-EecCC----eEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeCCC--------------ce
Q 022967 81 DVCVDRNGVLY-T-ATRDG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADK--------------GL 139 (289)
Q Consensus 81 ~l~~d~~g~l~-v-~~~~g----~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~--------------~i 139 (289)
++++.|||+.. + .+..| .|+.++ .+|+............ ++++.+|..|+++.... .|
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCEE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCEE
Confidence 46788888744 3 33333 488888 4555433211112224 78898774466654322 26
Q ss_pred EEEe-CCC-e-EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCC--e-EEE
Q 022967 140 LKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--E-TSI 212 (289)
Q Consensus 140 ~~~~-~~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--~-~~~ 212 (289)
++.+ .++ . ..+.....+.+ ....++.+++||+ |+++.... ......|+.+|.+++ + ...
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELP-KRGHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCT-TCEEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECCCEE
T ss_pred EEEECCCCchhCEEEeccCCCC-eEEEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCcccEE
Confidence 6776 434 2 22222211111 1245788999996 55543210 002357888887766 4 555
Q ss_pred eeCCCCCcceEEEecCCCEEEEEeCC---CCeEEEEEecC
Q 022967 213 LLDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKG 249 (289)
Q Consensus 213 ~~~~~~~p~gl~~~~d~~~l~v~~~~---~~~i~~~~~~~ 249 (289)
+.......... ++++++.||+.... +.+|+++++++
T Consensus 312 l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 312 LIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred ecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 54433322333 45889988887542 46799999875
No 279
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.29 E-value=0.022 Score=47.88 Aligned_cols=151 Identities=15% Similarity=0.095 Sum_probs=82.1
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEe-cCCceE---EeeeecCcCccCeEEcC--CCcEEE-EeCCCceEEEe-CCC-e
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE---NWKLIGGDTLLGITTTQ--ENEILV-CDADKGLLKVT-EEG-V 147 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~-~~g~~~---~~~~~~~~p~~gl~~d~--~g~l~v-~~~~~~i~~~~-~~g-~ 147 (289)
.-.+++++++|++. ++..++.|..++ .+++.. .+....+... .+++.+ +|++++ +..+..+..++ .++ .
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 34678899988766 666889999998 445322 2222233344 788854 365544 44445566677 555 3
Q ss_pred EEEEeccCCccccCccceEEcCC--CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC-eEEEee---CCCCCcc
Q 022967 148 TVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILL---DSLFFAN 221 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~d--G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~---~~~~~p~ 221 (289)
..... ..+. ....+.+++.|+ |.+.++... .+.|..++..++ ...... ......+
T Consensus 94 ~~~~~-~~~h-~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 94 EKSHE-HAGH-DSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp CEEEE-ECCC-SSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred eEEEE-ccCC-CCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 22211 1111 124678999987 655554332 244555554433 222111 1112235
Q ss_pred eEEEecCC-----------------CEEEEEeCCCCeEEEEEecC
Q 022967 222 GVALSKDE-----------------DYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 222 gl~~~~d~-----------------~~l~v~~~~~~~i~~~~~~~ 249 (289)
.++|+|+. + ++++-...+.|..||+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECT
T ss_pred eEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCC
Confidence 56777762 3 455545567788888753
No 280
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.28 E-value=0.063 Score=46.97 Aligned_cols=83 Identities=8% Similarity=0.021 Sum_probs=53.7
Q ss_pred CCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeC-CCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCC
Q 022967 197 HGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET-FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG 275 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G 275 (289)
.+.|..+|..+++.............+.++++++.++++.. ..+.|..||...... ...+. ...+....+++.++|
T Consensus 300 D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~--v~~l~-gH~~~V~~l~~spdg 376 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK--VAELK-GHTSRVLSLTMSPDG 376 (420)
T ss_dssp TCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTS
T ss_pred CCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE--EEEEc-CCCCCEEEEEEcCCC
Confidence 46788888887776655555556778899999998877643 457899998764321 22221 222345567888888
Q ss_pred CEEEEEe
Q 022967 276 SFWIAIL 282 (289)
Q Consensus 276 ~lwv~~~ 282 (289)
.+.++..
T Consensus 377 ~~l~S~s 383 (420)
T 4gga_A 377 ATVASAA 383 (420)
T ss_dssp SCEEEEE
T ss_pred CEEEEEe
Confidence 6655543
No 281
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.25 E-value=0.0036 Score=57.21 Aligned_cols=124 Identities=15% Similarity=0.233 Sum_probs=77.7
Q ss_pred cccCccceEEcC-CCcEEEeeCCCc-cCcc---ccccccceecCCCEEEEEeCCCC-------eEEEee-----------
Q 022967 158 RINLADDLIAAT-DGSIYFSVASTK-FGLH---NWGLDLLEAKPHGKLLKYDPSLN-------ETSILL----------- 214 (289)
Q Consensus 158 ~~~~~~~l~~~~-dG~lyv~~~~~~-~~~~---~~~~~~~~~~~~g~i~~~~~~~~-------~~~~~~----------- 214 (289)
++..|.+++++| +|.+|++-.... .+.. .........+..|.|+++..+++ +++.+.
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 445688999998 789999865421 1100 00011223356789999986532 133332
Q ss_pred -----------CCCCCcceEEEecCCCEEEE-EeCC-----------CCeEEEEEecCCCCcceeeeeccC-CCCCCcee
Q 022967 215 -----------DSLFFANGVALSKDEDYLVV-CETF-----------KFRCLKYWLKGESKEQTEIFVENL-PGGPDNIK 270 (289)
Q Consensus 215 -----------~~~~~p~gl~~~~d~~~l~v-~~~~-----------~~~i~~~~~~~~~~~~~~~~~~~~-~~~p~~i~ 270 (289)
..+..|+.|+|+++|. ||+ +|.. ++.+++++.+.. ....|.... ...|.|++
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG---el~~fl~~P~~aEpnGia 537 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATG---EIRRFMVGPIGCEVTGIS 537 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTC---CEEEEEECCTTCEEEEEE
T ss_pred cccCccCccccCccCCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCC---eEEEEEeCCCCccccCCE
Confidence 0257799999999988 899 6542 347888875432 344454322 24689999
Q ss_pred eCCCC-CEEEEEeCcc
Q 022967 271 LAPDG-SFWIAILQVF 285 (289)
Q Consensus 271 ~d~~G-~lwv~~~~g~ 285 (289)
+..|+ .|||+....|
T Consensus 538 fSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 538 FSPDQKTLFVGIQHPG 553 (592)
T ss_dssp ECTTSSEEEEEEESTT
T ss_pred ECCCCCEEEEEEeCCC
Confidence 99998 6899876544
No 282
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.24 E-value=0.0095 Score=56.67 Aligned_cols=131 Identities=7% Similarity=-0.053 Sum_probs=76.2
Q ss_pred ceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeeecC-cCc----cCeEEcCCCc-EEEEeCC---------CceEEEe
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGG-DTL----LGITTTQENE-ILVCDAD---------KGLLKVT 143 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~-~p~----~gl~~d~~g~-l~v~~~~---------~~i~~~~ 143 (289)
.++.+.++|.+++.. ++.|+.++ .+|+...+..... ... .++++.+||+ |+++... ..++.+|
T Consensus 20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 356788888776655 88999999 5566544433211 111 0367789997 4443321 1255677
Q ss_pred -CCC-eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-C---
Q 022967 144 -EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-S--- 216 (289)
Q Consensus 144 -~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~--- 216 (289)
.+| ...+... . ......+++|||+ |.++. .+.|+..+.++++...+.. +
T Consensus 99 ~~~~~~~~l~~~-~----~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~~~~~~lt~~g~~~ 154 (740)
T 4a5s_A 99 LNKRQLITEERI-P----NNTQWVTWSPVGHKLAYVW-------------------NNDIYVKIEPNLPSYRITWTGKED 154 (740)
T ss_dssp TTTTEECCSSCC-C----TTEEEEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCSCCBTT
T ss_pred CCCCcEEEcccC-C----CcceeeEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEcCCCCcc
Confidence 555 4332111 1 1345778999995 55542 1468888877666544422 1
Q ss_pred ---------------CCCcceEEEecCCCEEEEE
Q 022967 217 ---------------LFFANGVALSKDEDYLVVC 235 (289)
Q Consensus 217 ---------------~~~p~gl~~~~d~~~l~v~ 235 (289)
+....+++|+|||+.|...
T Consensus 155 ~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 155 IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred ceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 1222458899999977765
No 283
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.0057 Score=55.91 Aligned_cols=149 Identities=7% Similarity=-0.014 Sum_probs=89.5
Q ss_pred cceEEEccCCCEEEEecCCeEEEEec-CCce--EEeeeecCcCccCe--EEcCCC-cEEEEeCCCc-eEEEe-CCC--eE
Q 022967 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTW--ENWKLIGGDTLLGI--TTTQEN-EILVCDADKG-LLKVT-EEG--VT 148 (289)
Q Consensus 79 p~~l~~d~~g~l~v~~~~g~i~~~~~-~g~~--~~~~~~~~~p~~gl--~~d~~g-~l~v~~~~~~-i~~~~-~~g--~~ 148 (289)
..++++.+++.|.++..+|.|..++. ++.. ..+........ ++ ++.++| .++++....+ +..+| .++ ..
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 45678877777778889999999994 3432 22222223334 77 456777 7766554444 55566 444 33
Q ss_pred EEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE-EEeeCCCCCcceEEEec
Q 022967 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-SILLDSLFFANGVALSK 227 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~~~~~~p~gl~~~~ 227 (289)
.+.....+ .....+++.|+|..+++... .+.|..+|..++.. ..+.......+.++|+|
T Consensus 348 ~~~~~~~~---~~v~~v~fsp~~~~l~s~~~-----------------d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 348 TTVSRFRG---SNLVPVVYCPQIYSYIYSDG-----------------ASSLRAVPSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp EEEEECSC---CSCCCEEEETTTTEEEEECS-----------------SSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred cccccccc---CcccceEeCCCcCeEEEeCC-----------------CCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence 33221111 12568999999987776432 24566777765542 33333444567899999
Q ss_pred CCCEEEEEeCCCCeEEEEEecC
Q 022967 228 DEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 228 d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
+++.|. +....+.|..|++..
T Consensus 408 ~g~~l~-Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 408 LHPMVL-AGSADGSLIITNAAR 428 (524)
T ss_dssp SCCBCE-EEETTTEEECCBSCS
T ss_pred CCCeEE-EEECCCEEEEEechH
Confidence 998554 445557777776543
No 284
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.22 E-value=0.039 Score=46.36 Aligned_cols=150 Identities=14% Similarity=0.061 Sum_probs=77.8
Q ss_pred cceEEEcc--CCC-EEEEecCCeEEEEe-cCCceE---EeeeecCcCccCeEEcCC--CcEEEEeCC-CceEEEe-CCC-
Q 022967 79 PEDVCVDR--NGV-LYTATRDGWIKRLH-KNGTWE---NWKLIGGDTLLGITTTQE--NEILVCDAD-KGLLKVT-EEG- 146 (289)
Q Consensus 79 p~~l~~d~--~g~-l~v~~~~g~i~~~~-~~g~~~---~~~~~~~~p~~gl~~d~~--g~l~v~~~~-~~i~~~~-~~g- 146 (289)
-.++++.+ +|+ |..+..++.|..++ .+++.. .+........ .+++.++ |.++++... ..+..++ ..+
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 45677753 355 55677889999998 445322 2222233445 8999876 655555433 4455555 332
Q ss_pred -eEEEEeccCCccccCccceEEcCCC-----------------cEEEeeCCCccCccccccccceecCCCEEEEEeCCCC
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDG-----------------SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG-----------------~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 208 (289)
.... ....+ .......+.+.|++ .++++.. ..+.|..+|.+++
T Consensus 139 ~~~~~-~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-----------------~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 139 QWEVK-KINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG-----------------CDNLIKLWKEEED 199 (316)
T ss_dssp CEEEC-CBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCB-----------------TTSBCCEEEECTT
T ss_pred Cccee-eeecc-ccCCcceEEEccccCCccccccccccCccccceEEEec-----------------CCCeEEEEEeCCC
Confidence 2211 11111 11234566777663 2222211 2233444443322
Q ss_pred -eEEE---eeCCCCCcceEEEecCC----CEEEEEeCCCCeEEEEEecC
Q 022967 209 -ETSI---LLDSLFFANGVALSKDE----DYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 209 -~~~~---~~~~~~~p~gl~~~~d~----~~l~v~~~~~~~i~~~~~~~ 249 (289)
.... +.........++|+|++ + ++++....+.|..|++..
T Consensus 200 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 200 GQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp SCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEEEEETTCEEEEEECSS
T ss_pred CccceeeecccCCCceEEEEecCCCCCCCc-eEEEEcCCCeEEEEEccC
Confidence 2222 22223345788999986 4 555556678999998764
No 285
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.047 Score=47.81 Aligned_cols=154 Identities=11% Similarity=0.125 Sum_probs=88.4
Q ss_pred CCcceEEEcc-CCCEE-EEecCCeEEEEec-C---Cc-eE-Eee-eecCcCccCeEEcCCCcEEEEeCC-CceEEEe-C-
Q 022967 77 NGPEDVCVDR-NGVLY-TATRDGWIKRLHK-N---GT-WE-NWK-LIGGDTLLGITTTQENEILVCDAD-KGLLKVT-E- 144 (289)
Q Consensus 77 ~~p~~l~~d~-~g~l~-v~~~~g~i~~~~~-~---g~-~~-~~~-~~~~~p~~gl~~d~~g~l~v~~~~-~~i~~~~-~- 144 (289)
....++++.+ +|.+. ++..+|.|..++. + +. .. ... ....... .+++.+++.++++... ..|..++ .
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVT-QITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 4567899999 88766 6668899999982 2 32 11 111 2233445 8999988876555433 3344443 1
Q ss_pred --CC--eEEEEec----cCCc---cccCccceE--EcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 145 --EG--VTVLASH----VNGS---RINLADDLI--AATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 145 --~g--~~~~~~~----~~~~---~~~~~~~l~--~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
++ ....... ..-. .......+. ..+++.+.++.. ..+.|..+|..+++..
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT-----------------NLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE-----------------TTSEEEEEETTTCCEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCeee
Confidence 34 2211100 0000 011222333 446676555432 2478888998766654
Q ss_pred EeeCC---CCCcceEEEecCCCEEEEEeCCCCeEEEEEecC
Q 022967 212 ILLDS---LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 212 ~~~~~---~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
..... ......++|+|+++.|+.+. ..+.|..||+..
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~ 245 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRF 245 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTT
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCC
Confidence 33332 34567899999999666664 457899999764
No 286
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.16 E-value=0.015 Score=48.50 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=53.0
Q ss_pred CCcceEEEccC--CCEE-EEecCCeEEEEe-cCCce-EEee-------------eecCcCccCeEEcCC---CcEEEEeC
Q 022967 77 NGPEDVCVDRN--GVLY-TATRDGWIKRLH-KNGTW-ENWK-------------LIGGDTLLGITTTQE---NEILVCDA 135 (289)
Q Consensus 77 ~~p~~l~~d~~--g~l~-v~~~~g~i~~~~-~~g~~-~~~~-------------~~~~~p~~gl~~d~~---g~l~v~~~ 135 (289)
....++++.++ +.+. ++..++.|..++ .+++. ..+. ....... .+++.++ +.++++..
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~l~~~~ 189 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDF-CLSWCPSRFSPEKLAVSA 189 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCE-EEEECCCSSSCCEEEEEE
T ss_pred CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccccee-EEEeccCCCCCcEEEEec
Confidence 44667889887 7755 677889999998 33321 1110 0112233 6777765 65555443
Q ss_pred CCceEEEe--CCC-eEEEEeccCCccccCccceEEcCCC----cEEEee
Q 022967 136 DKGLLKVT--EEG-VTVLASHVNGSRINLADDLIAATDG----SIYFSV 177 (289)
Q Consensus 136 ~~~i~~~~--~~g-~~~~~~~~~~~~~~~~~~l~~~~dG----~lyv~~ 177 (289)
..+...+. .++ ...+.. ..+ .......+++.|+| .+.++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~-~~~-h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 190 LEQAIIYQRGKDGKLHVAAK-LPG-HKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp TTEEEEEEECTTSCEEEEEE-CCC-CCSCEEEEEECCCSSCSSEEEEEE
T ss_pred CCCcEEEEccCCCceeeeee-cCC-CCcceeEEEECCCCCCcceEEEEE
Confidence 44433443 444 433322 111 11246688999987 555543
No 287
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.09 E-value=0.019 Score=54.24 Aligned_cols=110 Identities=12% Similarity=0.175 Sum_probs=65.0
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeecC------------cCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEE
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGG------------DTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLA 151 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~------------~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~ 151 (289)
+|.||+.+.++.|+.+| .+|+...-..... ... +++++ ++.||++.....++.+| .+| ...-.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~a~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNR-GVALW-KGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCC-CCEEE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCC-CceEE-CCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 78999998888999999 5776542221110 123 67774 67899988667799999 678 43322
Q ss_pred ecc-CCcc-ccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 152 SHV-NGSR-INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 152 ~~~-~~~~-~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
... .... ........+ .++.+|++.....+ ...+.|+.+|.++|+..
T Consensus 155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~------------~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEY------------GVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEE
T ss_pred cCCcCcCcCcccccCcEE-ECCEEEEEeccccc------------CCCCEEEEEECCCCcEE
Confidence 211 1000 011112223 26788887542111 12467899998877654
No 288
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.08 E-value=0.037 Score=47.41 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=65.5
Q ss_pred CcCccCeEEcCCCcEEEEeCC-Cc-eEEEe-CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccc
Q 022967 116 GDTLLGITTTQENEILVCDAD-KG-LLKVT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLD 190 (289)
Q Consensus 116 ~~p~~gl~~d~~g~l~v~~~~-~~-i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~ 190 (289)
+... .++++++|+++++... .. +..+| .++ +..+... ........+++.|||.+.++...
T Consensus 196 ~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g---~h~~~v~~~~~s~~~~~l~s~s~----------- 260 (355)
T 3vu4_A 196 NPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG---LDRADVVDMKWSTDGSKLAVVSD----------- 260 (355)
T ss_dssp SCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT---TCCSCEEEEEECTTSCEEEEEET-----------
T ss_pred CceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC---CCCCcEEEEEECCCCCEEEEEEC-----------
Confidence 3345 8999999987766544 44 66677 566 4444311 01135678999999987766432
Q ss_pred cceecCCCEEEEEeCCCCe---EEEe--------------------eCC-CCCcceEEEecCCCEEEEEeCCCCeEEEEE
Q 022967 191 LLEAKPHGKLLKYDPSLNE---TSIL--------------------LDS-LFFANGVALSKDEDYLVVCETFKFRCLKYW 246 (289)
Q Consensus 191 ~~~~~~~g~i~~~~~~~~~---~~~~--------------------~~~-~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~ 246 (289)
.+.|..+|.+.+. ...+ ... ......++|++|++.+++. ...+.+.+|+
T Consensus 261 ------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~-~~dg~~~~~~ 333 (355)
T 3vu4_A 261 ------KWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVW-PHTRMIETFK 333 (355)
T ss_dssp ------TCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEE-TTTTEEEEEE
T ss_pred ------CCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEE-eCCCeEEEEE
Confidence 3456556654221 1110 000 0111457899999866666 4568888888
Q ss_pred ecC
Q 022967 247 LKG 249 (289)
Q Consensus 247 ~~~ 249 (289)
+..
T Consensus 334 ~~~ 336 (355)
T 3vu4_A 334 VVF 336 (355)
T ss_dssp EEE
T ss_pred EEc
Confidence 753
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.06 E-value=0.13 Score=47.47 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=17.6
Q ss_pred CCCEEEEec------CCeEEEEe-cCCceE
Q 022967 87 NGVLYTATR------DGWIKRLH-KNGTWE 109 (289)
Q Consensus 87 ~g~l~v~~~------~g~i~~~~-~~g~~~ 109 (289)
+|.+|++.. ++.|+.+| .+|+..
T Consensus 160 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 160 KDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 678888775 68899999 577654
No 290
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.041 Score=50.23 Aligned_cols=174 Identities=7% Similarity=-0.070 Sum_probs=92.6
Q ss_pred cceEEEccC------CCEE-EEecCCeEEEEec-CCceE------------EeeeecCcCccCeEEcCCCcEEEEeCCCc
Q 022967 79 PEDVCVDRN------GVLY-TATRDGWIKRLHK-NGTWE------------NWKLIGGDTLLGITTTQENEILVCDADKG 138 (289)
Q Consensus 79 p~~l~~d~~------g~l~-v~~~~g~i~~~~~-~g~~~------------~~~~~~~~p~~gl~~d~~g~l~v~~~~~~ 138 (289)
...+++.|+ +.+. .+..+|.|..++. .+... .+........ .+++.+++.|..+..+..
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~~lasgs~Dgt 288 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPTTVVCGFKNGF 288 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSSEEEEEETTSE
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCCeEEEEeCCCE
Confidence 456777765 4455 5668899999983 33211 1111112234 788877665655555455
Q ss_pred eEEEe-CCC--e-EEEEeccCCccccCccce--EEcCCC-cEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 139 LLKVT-EEG--V-TVLASHVNGSRINLADDL--IAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 139 i~~~~-~~g--~-~~~~~~~~~~~~~~~~~l--~~~~dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
|..+| .++ . ..+.. .. ....++ ++.++| .+.++... .+.|..+|..+++..
T Consensus 289 V~lWD~~~~~~~~~~~~~-H~----~~V~sv~~~~s~~g~~~laS~S~-----------------D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQV-HD----SYILSVSTAYSDFEDTVVSTVAV-----------------DGYFYIFNPKDIATT 346 (524)
T ss_dssp EEEEETTBCSSCSEEEEC-SS----SCEEEEEEECCTTSCCEEEEEET-----------------TSEEEEECGGGHHHH
T ss_pred EEEEECCCCCCceEEeec-cc----ccEEEEEEEcCCCCCeEEEEecc-----------------CCeEEEEECCCCCcc
Confidence 66677 444 2 22211 11 235566 456777 77666432 466777776543321
Q ss_pred -EeeCCC--CCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEE
Q 022967 212 -ILLDSL--FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWI 279 (289)
Q Consensus 212 -~~~~~~--~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv 279 (289)
.+.... .....++|+|+++. +++....+.|..||+...... ..+. ...+....+++.++|.+.+
T Consensus 347 ~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~--~~l~-gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAV--HPLV-SRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp CEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCC--EEEE-ECSSCEEEEECCSSCCBCE
T ss_pred cccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccccc--eeee-cCCCceEEEEeCCCCCeEE
Confidence 111111 12467999999985 555556678888887543211 1111 1122344555666664433
No 291
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.02 E-value=0.078 Score=48.92 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=64.3
Q ss_pred CCCEEEEec-CCeEEEEec--CCceEEeeeecC------------cCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEE
Q 022967 87 NGVLYTATR-DGWIKRLHK--NGTWENWKLIGG------------DTLLGITTTQENEILVCDADKGLLKVT-EEG-VTV 149 (289)
Q Consensus 87 ~g~l~v~~~-~g~i~~~~~--~g~~~~~~~~~~------------~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~ 149 (289)
+|.||+.+. ++.|+.+|. +|+......... ... +++++ ++.||+......++.+| .+| ...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDR-GLAYG-AGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcccccccccccccc-ccEEE-CCEEEEEeCCCEEEEEECCCCCEEE
Confidence 789999887 889999995 776542221111 112 56664 67899987667799999 788 433
Q ss_pred EEeccCCcc--ccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 150 LASHVNGSR--INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 150 ~~~~~~~~~--~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
-.. ..+.. ......-.+. +|.+|++..... ....+.|+.+|+++|+..
T Consensus 140 ~~~-~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~------------~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 140 EVE-VCDPKVGSTLTQAPFVA-KDTVLMGCSGAE------------LGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EEE-CCCGGGTCBCCSCCEEE-TTEEEEECBCGG------------GTCCCEEEEEETTTCCEE
T ss_pred Eec-CCCCCccceeccCCEEE-CCEEEEEecCCc------------cCCCCEEEEEECCCCcEE
Confidence 222 11110 0111112232 678998754210 012468999998877654
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.94 E-value=0.04 Score=48.91 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=84.4
Q ss_pred CcceEEEccCCCEEE----Ee-cCCeEEEEe-cCC-----ce----EEeee---ecCcCccCeEEcCC-CcEEEE-eCCC
Q 022967 78 GPEDVCVDRNGVLYT----AT-RDGWIKRLH-KNG-----TW----ENWKL---IGGDTLLGITTTQE-NEILVC-DADK 137 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v----~~-~~g~i~~~~-~~g-----~~----~~~~~---~~~~p~~gl~~d~~-g~l~v~-~~~~ 137 (289)
...++++.++|++.+ +. .++.|..|+ .++ +. ..+.. ...... +++++++ ++++++ ...+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 467899999888664 33 567888888 221 11 11111 123445 8999987 666664 4445
Q ss_pred ceEEEe-CCCeEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC
Q 022967 138 GLLKVT-EEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS 216 (289)
Q Consensus 138 ~i~~~~-~~g~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~ 216 (289)
.+..+| .++....... . ....+.++++.|+|...++.. ..+.|..+|.++.....+...
T Consensus 173 ~v~iwD~~~~~~~~~~~-~--~~~~v~~v~wspdg~~lasgs-----------------~dg~v~iwd~~~~~~~~~~~~ 232 (434)
T 2oit_A 173 SIAVLQVTETVKVCATL-P--STVAVTSVCWSPKGKQLAVGK-----------------QNGTVVQYLPTLQEKKVIPCP 232 (434)
T ss_dssp CEEEEEESSSEEEEEEE-C--GGGCEEEEEECTTSSCEEEEE-----------------TTSCEEEECTTCCEEEEECCC
T ss_pred eEEEEEcCCCcceeecc-C--CCCceeEEEEcCCCCEEEEEc-----------------CCCcEEEEccCCcccccccCC
Confidence 577777 5552111111 1 113567899999996444432 246788888873323222211
Q ss_pred C-------CCcceEEEecCCCEEEEEeCCC------CeEEEEEecC
Q 022967 217 L-------FFANGVALSKDEDYLVVCETFK------FRCLKYWLKG 249 (289)
Q Consensus 217 ~-------~~p~gl~~~~d~~~l~v~~~~~------~~i~~~~~~~ 249 (289)
. .....++|++++.++.+...+. ..+..|++..
T Consensus 233 ~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 1 1345678888776554444333 2367777653
No 293
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.94 E-value=0.0094 Score=56.22 Aligned_cols=164 Identities=7% Similarity=-0.012 Sum_probs=85.0
Q ss_pred cceEEEccCCCEE-EEec---------CCeEEEEec-CCce---EEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-
Q 022967 79 PEDVCVDRNGVLY-TATR---------DGWIKRLHK-NGTW---ENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT- 143 (289)
Q Consensus 79 p~~l~~d~~g~l~-v~~~---------~g~i~~~~~-~g~~---~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~- 143 (289)
..++++.|||+.. ++.. ++.|+.++. +|+. ..+ ..... .+++.+||+..+....+.|+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeC
Confidence 5678999999844 4433 478888984 4544 222 13345 89999999643333346788888
Q ss_pred CCC-eEEEEeccCCc-c-------------ccCccceEEcCCCc-EEEeeCC-CccCcc--------ccc-------ccc
Q 022967 144 EEG-VTVLASHVNGS-R-------------INLADDLIAATDGS-IYFSVAS-TKFGLH--------NWG-------LDL 191 (289)
Q Consensus 144 ~~g-~~~~~~~~~~~-~-------------~~~~~~l~~~~dG~-lyv~~~~-~~~~~~--------~~~-------~~~ 191 (289)
.+| ...+....... - +....++++.|||+ |+++... ...... ... ...
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 556 44332211000 0 11225899999996 4443211 000000 000 000
Q ss_pred ceecCCCEEEEEeCCCCeEE---Eee------CCCCCcceEEEecCCCEEEEE-eCCC--CeEEEEE
Q 022967 192 LEAKPHGKLLKYDPSLNETS---ILL------DSLFFANGVALSKDEDYLVVC-ETFK--FRCLKYW 246 (289)
Q Consensus 192 ~~~~~~g~i~~~~~~~~~~~---~~~------~~~~~p~gl~~~~d~~~l~v~-~~~~--~~i~~~~ 246 (289)
-.......|+.+|.++++.. .+. ........++|+||++.++.. +... ..|+.+|
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 00112236788888766531 221 122234678999997644432 2222 3588888
No 294
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.89 E-value=0.12 Score=48.68 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=49.2
Q ss_pred CCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 197 HGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
.+.|..+|+.+++..-.........+..+..+++.+|++ +..+.++.||..+.+... .+.......-.-+....+|.
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLW--EAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTE
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceee--eeeCCCCcccCCEEEEeCCE
Confidence 378999999988754322211223455666778878887 567899999976443221 12111111112244346788
Q ss_pred EEEEEeCc
Q 022967 277 FWIAILQV 284 (289)
Q Consensus 277 lwv~~~~g 284 (289)
.||+...|
T Consensus 533 ~~v~~~~G 540 (677)
T 1kb0_A 533 QYVSVAVG 540 (677)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecc
Confidence 88887544
No 295
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.88 E-value=0.13 Score=48.28 Aligned_cols=84 Identities=18% Similarity=0.124 Sum_probs=47.0
Q ss_pred CEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCE
Q 022967 198 GKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (289)
Q Consensus 198 g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 277 (289)
+.|+.+|+.+++..--........+..+...++.+|+. +....|+.||....+... .+.........-+..-.+|++
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~l~--~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEALW--QFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcChhhe--EecCCCCcccCceEEEECCEE
Confidence 78999999988764322211222344555567778887 566899999976432211 111111111122333456888
Q ss_pred EEEEeCc
Q 022967 278 WIAILQV 284 (289)
Q Consensus 278 wv~~~~g 284 (289)
|++..+|
T Consensus 515 yva~~~G 521 (668)
T 1kv9_A 515 YVAIMAG 521 (668)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 8887654
No 296
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.85 E-value=0.16 Score=47.77 Aligned_cols=156 Identities=13% Similarity=0.043 Sum_probs=82.0
Q ss_pred ceEEEccCCCEE--EEecCC----eEEEEe-cCCceEEeeeecCcCccCeEEcCCCc-EEEEeCC-------------Cc
Q 022967 80 EDVCVDRNGVLY--TATRDG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-------------KG 138 (289)
Q Consensus 80 ~~l~~d~~g~l~--v~~~~g----~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-------------~~ 138 (289)
.++++.|||+.. ..+..| .|+.++ .+|+............ ++++. ||+ |+++... ..
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 346788888743 333332 477777 4566433221112234 77887 774 6665432 22
Q ss_pred eEEEe-CCC--eEEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCC--eEEE
Q 022967 139 LLKVT-EEG--VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--ETSI 212 (289)
Q Consensus 139 i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--~~~~ 212 (289)
|++.+ ..+ ...++.......-....++.+++||+ |+++.... .....|+.+|.+++ +...
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--------------~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS--------------TSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS--------------SSCCEEEEEETTSTTCCCEE
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC--------------CCCcEEEEEECCCCCCceEE
Confidence 66666 333 21222211110001234678899996 55543220 01247888887654 4555
Q ss_pred eeCCCCCcceEEEecCCCEEEEEeCC---CCeEEEEEecCCCC
Q 022967 213 LLDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKGESK 252 (289)
Q Consensus 213 ~~~~~~~p~gl~~~~d~~~l~v~~~~---~~~i~~~~~~~~~~ 252 (289)
+......-.. .++++++.||+.... +.+|+++++++...
T Consensus 276 l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 276 VQGDLDADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred EeCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 5433322222 267788888876432 47899999876433
No 297
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.84 E-value=0.16 Score=41.93 Aligned_cols=82 Identities=9% Similarity=0.015 Sum_probs=49.0
Q ss_pred CEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEe-CCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 198 GKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCE-TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 198 g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
+.|..++..................+.++++++.++++. ...+.|..||+..... ...+. ...+....+++.++|.
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~--~~~l~-gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK--VAELK-GHTSRVLSLTMSPDGA 297 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSS
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE--EEEEc-CCCCCEEEEEEcCCCC
Confidence 455556665554444444444556778999999877764 3467899998764321 12221 2223455688888887
Q ss_pred EEEEEe
Q 022967 277 FWIAIL 282 (289)
Q Consensus 277 lwv~~~ 282 (289)
+.++..
T Consensus 298 ~l~S~s 303 (318)
T 4ggc_A 298 TVASAA 303 (318)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 655543
No 298
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.83 E-value=0.21 Score=46.19 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=46.6
Q ss_pred CCEEEEEeCCCCeEEEe-eCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCC
Q 022967 197 HGKLLKYDPSLNETSIL-LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG 275 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~-~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G 275 (289)
.+.|+.+|+.+++..-- ..+... .+-.+...++.+|++ +..+.|+.||.++.+.... +.........-+....+|
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~g-~~dg~l~A~D~~tG~~lW~--~~~~~g~~a~P~~y~~~G 540 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPL-WAGVLATAGNLVFTG-TGDGYFKAFDAKSGKELWK--FQTGSGIVSPPITWEQDG 540 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC-CSCCEEETTTEEEEE-CTTSEEEEEETTTCCEEEE--EECSSCCCSCCEEEEETT
T ss_pred cceEEEEECCCCCEEEEecCCCCC-cccceEeCCCEEEEE-CCCCcEEEEECCCCCEEEE--ecCCCCcccCceEEEECC
Confidence 57899999988875422 122111 222223346667776 4568899999764333211 111111111225555789
Q ss_pred CEEEEEeCc
Q 022967 276 SFWIAILQV 284 (289)
Q Consensus 276 ~lwv~~~~g 284 (289)
+.||+...|
T Consensus 541 ~qYv~~~~G 549 (582)
T 1flg_A 541 EQYLGVTVG 549 (582)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcc
Confidence 999998765
No 299
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.81 E-value=0.1 Score=49.34 Aligned_cols=83 Identities=18% Similarity=0.197 Sum_probs=48.5
Q ss_pred CEEEEEeCCCCeEEEee-CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCC
Q 022967 198 GKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (289)
Q Consensus 198 g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 276 (289)
+.|..+|+.+|+..-.. .+... .+-.+...++.+|++ +..+.|+.||.++.+... .+.........-++...+|.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIF-NGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLW--EQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSC-CCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTE
T ss_pred eeEEEEECCCCCeEeEccCCCCc-cCccceECCCEEEEE-CCCCcEEEEECCCCccce--eeeCCCCcccCceEEEECCE
Confidence 77999999988764322 22222 233556667767777 567899999976543321 12111111112254456789
Q ss_pred EEEEEeCc
Q 022967 277 FWIAILQV 284 (289)
Q Consensus 277 lwv~~~~g 284 (289)
.||+...|
T Consensus 531 qyv~~~~G 538 (689)
T 1yiq_A 531 QYVTFMAG 538 (689)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99997654
No 300
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.80 E-value=0.14 Score=45.02 Aligned_cols=146 Identities=14% Similarity=0.015 Sum_probs=75.0
Q ss_pred ceEEEccCCCEEEEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEEecc
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLASHV 154 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~~~~ 154 (289)
.++.++ +..++++..++.|..++ .+++...... ...... .+.++. ..++.+..+..+..++ .++ +..+....
T Consensus 283 ~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 359 (445)
T 2ovr_B 283 YSLQFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPN 359 (445)
T ss_dssp EEEEEC-SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE-EEEEET-TEEEEEETTSCEEEEETTTCCEEEEECSTT
T ss_pred EEEEEC-CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE-EEEEeC-CEEEEEeCCCeEEEEECCCCcEEEEEccCC
Confidence 344442 22344666777788887 4454332222 122223 555542 2344444445566777 555 33332110
Q ss_pred CCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee------CCCCCcceEEEecC
Q 022967 155 NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL------DSLFFANGVALSKD 228 (289)
Q Consensus 155 ~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~------~~~~~p~gl~~~~d 228 (289)
........++++ +.+.++.. ..+.|..+|..+++..... ........++++|+
T Consensus 360 --~~~~~v~~~~~~--~~~l~s~~-----------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 418 (445)
T 2ovr_B 360 --KHQSAVTCLQFN--KNFVITSS-----------------DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 418 (445)
T ss_dssp --SCSSCEEEEEEC--SSEEEEEE-----------------TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred --CCCCCEEEEEEC--CCEEEEEe-----------------CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCC
Confidence 011234456664 44444432 2477888888766643322 11233567899999
Q ss_pred CCEEEEEeCCC---CeEEEEEecC
Q 022967 229 EDYLVVCETFK---FRCLKYWLKG 249 (289)
Q Consensus 229 ~~~l~v~~~~~---~~i~~~~~~~ 249 (289)
+..+.++.... ..|..||++.
T Consensus 419 ~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 419 KLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEEEcccCCCCccEEEEEECCC
Confidence 88666654432 2488888764
No 301
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.035 Score=48.65 Aligned_cols=150 Identities=11% Similarity=0.072 Sum_probs=85.4
Q ss_pred CcceEEEccCCCEE-EEecCCeEEEEec----CCceEEeee-------------ecCcCccCeE--EcCCCcEEEE-eCC
Q 022967 78 GPEDVCVDRNGVLY-TATRDGWIKRLHK----NGTWENWKL-------------IGGDTLLGIT--TTQENEILVC-DAD 136 (289)
Q Consensus 78 ~p~~l~~d~~g~l~-v~~~~g~i~~~~~----~g~~~~~~~-------------~~~~p~~gl~--~d~~g~l~v~-~~~ 136 (289)
...++++.+++.+. ++..+|.|..++. +|+...... ...... .+. +.+++.++++ ...
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeCC
Confidence 35678888877755 6778898888873 444322211 011112 333 3456665554 443
Q ss_pred CceEEEe-CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEe
Q 022967 137 KGLLKVT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL 213 (289)
Q Consensus 137 ~~i~~~~-~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 213 (289)
..|..+| .++ +..+... ........++++|+|.+.++... .+.|..+|.++++....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENS---PRHGAVSSICIDEECCVLILGTT-----------------RGIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SEEEEEETTTCCEEEEEECC---GGGCCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccC---CCCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEEcCCccEEEE
Confidence 5577777 555 3333221 01135678999999986665432 36788888876665432
Q ss_pred e--CCCCCcceEEEe----cCCCEEEEEeCCCCeEEEEEecC
Q 022967 214 L--DSLFFANGVALS----KDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 214 ~--~~~~~p~gl~~~----~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
. ........++++ ++++ ++++....+.|..||+..
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred EecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 2 222334566554 4555 445545667899998764
No 302
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.72 E-value=0.11 Score=48.94 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=64.3
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeec-----------Cc-CccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEE
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIG-----------GD-TLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLA 151 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~-----------~~-p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~ 151 (289)
+|.||+++.++.|+.+| .+|+........ .. .. +++++ ++.||+......++.+| .+| ...-.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNR-GVAVW-KGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCC-ccEEE-CCEEEEEccCCEEEEEECCCCCEeeee
Confidence 78999999888999999 578754322111 01 12 56664 67899988667799999 778 43322
Q ss_pred ecc-CCcc-ccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 152 SHV-NGSR-INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 152 ~~~-~~~~-~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
... .... ......-.+ .+|.+|++.....+ ...+.|+.+|.++|+..
T Consensus 148 ~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRV-VNGKVVIGNGGAEF------------GVRGYVTAYDAETGKEA 196 (689)
T ss_dssp ECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEE
T ss_pred cCcCCCCCCccccCCcEE-ECCEEEEEeCCCcc------------CCCCEEEEEECCCCcEE
Confidence 211 1000 011111122 26788887542111 12468899998887753
No 303
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.69 E-value=0.28 Score=42.98 Aligned_cols=82 Identities=7% Similarity=-0.041 Sum_probs=42.9
Q ss_pred CCEEEEEeCCCCeEEEeeCC----CCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcc-eeeee-ccCCCCCCcee
Q 022967 197 HGKLLKYDPSLNETSILLDS----LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ-TEIFV-ENLPGGPDNIK 270 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~~~~----~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~-~~~~~~p~~i~ 270 (289)
.+.|..+|.++++....... ......+++ +++.++.+ ...+.|..|++....... ..... ....+....++
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 414 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITS-SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR 414 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEE-ETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEE-eCCCeEEEEECCCCceeeeeeccccCCCCceEEEEE
Confidence 46788888766654433322 222345566 45655554 556899999986543211 11110 11223345577
Q ss_pred eCCCCCEEEEE
Q 022967 271 LAPDGSFWIAI 281 (289)
Q Consensus 271 ~d~~G~lwv~~ 281 (289)
.+++|.+.++.
T Consensus 415 ~s~~~~~la~~ 425 (445)
T 2ovr_B 415 ASNTKLVCAVG 425 (445)
T ss_dssp ECSSEEEEEEE
T ss_pred ecCCEEEEEEc
Confidence 77777554443
No 304
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.66 E-value=0.086 Score=49.60 Aligned_cols=110 Identities=13% Similarity=0.180 Sum_probs=64.6
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeec-----------Cc-CccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEE
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIG-----------GD-TLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLA 151 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~-----------~~-p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~ 151 (289)
+|.||+++.++.|+.+| .+|+........ .. .. +++++ ++.||+......++.+| .+| ...-.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNR-GVALW-GDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-BTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCcc-ceEEE-CCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 78999999889999999 678754222111 01 13 56664 57899988667799999 778 43322
Q ss_pred eccCC-ccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 152 SHVNG-SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 152 ~~~~~-~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
..... ........-.+ .+|.+|++.....+ ...+.|+.+|.++|+..
T Consensus 144 ~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV-VKGKVIIGNGGAEY------------GVRGFVSAYDADTGKLA 191 (668)
T ss_dssp ECSCTTSSCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEE
T ss_pred ccCCCCCcceecCCCEE-ECCEEEEeCCCCCc------------CCCCEEEEEECCCCcEE
Confidence 21110 00111111222 26788887543111 12467899998877654
No 305
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.63 E-value=0.3 Score=42.52 Aligned_cols=144 Identities=14% Similarity=0.026 Sum_probs=84.1
Q ss_pred ceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeee--cCcCccCeEEcCCCcEEEE-eCCCceEEEe-CCC--eEEEEe
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLI--GGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTVLAS 152 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~--~~~p~~gl~~d~~g~l~v~-~~~~~i~~~~-~~g--~~~~~~ 152 (289)
..|+..+++.|.++. ++.|+.|+ .+|+....... ....++.++|.++|+++++ .....|..++ .++ +..+..
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~ 187 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 187 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC
Confidence 346776655444665 78899999 67776544332 2233338999999986655 4435566777 556 333211
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe--EEEeeCCCCCcceEEEecCCC
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--TSILLDSLFFANGVALSKDED 230 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~~~~~~~~p~gl~~~~d~~ 230 (289)
+...-.++..++.+.++.. ..+.+..+|..... ...+.........+.++++++
T Consensus 188 -------h~~~v~~~s~~~~~l~sgs-----------------~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 188 -------HSARVGSLSWNSYILSSGS-----------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp -------CSSCEEEEEEETTEEEEEE-----------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred -------CCCceEEEeeCCCEEEEEe-----------------CCCceeEeeecccceeeEEecccccceeeeeecCCCC
Confidence 1112223444566555432 23566667655322 233334445567788999999
Q ss_pred EEEEEeCCCCeEEEEEecC
Q 022967 231 YLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~ 249 (289)
.+... ...+.+..++...
T Consensus 244 ~l~s~-~~D~~v~i~~~~~ 261 (420)
T 4gga_A 244 HLASG-GNDNLVNVWPSAP 261 (420)
T ss_dssp EEEEE-ETTSCEEEEESSC
T ss_pred eeeee-eccccceEEeecc
Confidence 66555 4557888888754
No 306
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.45 E-value=0.084 Score=44.49 Aligned_cols=137 Identities=9% Similarity=-0.006 Sum_probs=76.0
Q ss_pred CCeEEEEec-CCceEEeeeecCcCccCeEEcCCCc-EEEEeC-C----CceEEEe-CCC-eEEEEeccCCccccCccceE
Q 022967 96 DGWIKRLHK-NGTWENWKLIGGDTLLGITTTQENE-ILVCDA-D----KGLLKVT-EEG-VTVLASHVNGSRINLADDLI 166 (289)
Q Consensus 96 ~g~i~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~-l~v~~~-~----~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~ 166 (289)
.+.|+.++. +|+...+ .... .+++.+||+ |+++.. . ..|+.++ ..| ...+... . . ...+.
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~-~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~----~-~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENAT-MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K----N-IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCE-EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S----E-EEEEE
T ss_pred cceEEEEeCCCCceEEc----ccCC-CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C----C-cccee
Confidence 456888884 4454443 3344 788999996 444432 1 2388888 556 5444331 1 1 56789
Q ss_pred EcCCCc-EEEeeCCCcc-Cccccccc-cc--ee-----cCCCEEEEEeCCCCeE-EEeeCCCCCcceEEEecCCCEEEEE
Q 022967 167 AATDGS-IYFSVASTKF-GLHNWGLD-LL--EA-----KPHGKLLKYDPSLNET-SILLDSLFFANGVALSKDEDYLVVC 235 (289)
Q Consensus 167 ~~~dG~-lyv~~~~~~~-~~~~~~~~-~~--~~-----~~~g~i~~~~~~~~~~-~~~~~~~~~p~gl~~~~d~~~l~v~ 235 (289)
+.|||+ |+++.....- ........ .+ .+ .....|+.++.++++. ..+... ....++|+||+ .+|++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP--RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE--TTCEEEEETTE-EEEEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC--CcccccCCCCe-EEEEE
Confidence 999995 6665321000 00000000 00 00 1135799999988876 555432 56788999999 67766
Q ss_pred eCC--------CCeEEEEE
Q 022967 236 ETF--------KFRCLKYW 246 (289)
Q Consensus 236 ~~~--------~~~i~~~~ 246 (289)
... ...|+.++
T Consensus 188 ~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE
T ss_pred ecccccccccccccEEEeC
Confidence 443 33677777
No 307
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.31 E-value=0.47 Score=41.05 Aligned_cols=61 Identities=11% Similarity=-0.040 Sum_probs=36.9
Q ss_pred EEEec-CCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCCCCEEEEEeCccc
Q 022967 223 VALSK-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQVFI 286 (289)
Q Consensus 223 l~~~~-d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwv~~~~g~i 286 (289)
..+++ .++.+.++....+.|+.||........ ... ....-...++..+||+++.....+|+
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~--~~~-~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS--IPI-QLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCCE--EEE-ECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEEE--Eec-CCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 34444 445455566667899999976543221 122 12233567899999988777666664
No 308
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.30 E-value=0.46 Score=40.85 Aligned_cols=50 Identities=18% Similarity=0.085 Sum_probs=33.2
Q ss_pred CCEEEEEeCCCCeEEEeeCC-CCCcc-eEEEecCCCEEEEEeCCCCeEEEEEe
Q 022967 197 HGKLLKYDPSLNETSILLDS-LFFAN-GVALSKDEDYLVVCETFKFRCLKYWL 247 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~~~~-~~~p~-gl~~~~d~~~l~v~~~~~~~i~~~~~ 247 (289)
.+.|..+|..+++......+ ..... .++|+|||++|+-+ ...+.|+.||.
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG-S~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG-QKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE-CTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE-ECCCcEEEecC
Confidence 46677888887775544433 23344 47999999965544 66788888874
No 309
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.30 E-value=0.49 Score=43.64 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=40.3
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeecCc----------CccCeEEcCCCcEEEEeCCCceEEEe-CCC
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGGD----------TLLGITTTQENEILVCDADKGLLKVT-EEG 146 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~~~----------p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g 146 (289)
+|.||+.+..++|+.+| .+|+...-...... .. +++++ ++.||+......++.+| .+|
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~-g~a~~-~~~v~~~t~dg~l~AlD~~TG 137 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNR-GAAIY-GDKVFFGTLDASVVALNKNTG 137 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCC-CCEEE-TTEEEEEETTTEEEEEESSSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCC-ccEEE-CCEEEEEeCCCEEEEEECCCC
Confidence 78999988756699999 57875422221111 13 66664 67899988767899999 788
No 310
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.23 E-value=0.33 Score=45.02 Aligned_cols=110 Identities=16% Similarity=0.127 Sum_probs=63.5
Q ss_pred CCCEEEEec-CCeEEEEec--CCceEEeeeecC------------cCccCeEEc-CCCc----EEEEeCCCceEEEe-CC
Q 022967 87 NGVLYTATR-DGWIKRLHK--NGTWENWKLIGG------------DTLLGITTT-QENE----ILVCDADKGLLKVT-EE 145 (289)
Q Consensus 87 ~g~l~v~~~-~g~i~~~~~--~g~~~~~~~~~~------------~p~~gl~~d-~~g~----l~v~~~~~~i~~~~-~~ 145 (289)
+|.||+.+. ++.|+.+|. +|+......... ... ++++. .++. ||+......++.+| .+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~-g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNR-GLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCC-CCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccccccccc-ceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 689999887 889999996 776542221111 123 67772 2456 99987667799999 78
Q ss_pred C-eEEEEeccCCcc--ccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 146 G-VTVLASHVNGSR--INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 146 g-~~~~~~~~~~~~--~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
| ...-.. ..... ......-.+ .+|.+|+...... ....+.|+.+|.++|+..
T Consensus 141 G~~~W~~~-~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e------------~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 141 GETVWKVE-NSDIKVGSTLTIAPYV-VKDKVIIGSSGAE------------LGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp CCEEEEEE-CCCGGGTCBCCSCCEE-ETTEEEECCBCGG------------GTCCCEEEEEETTTCCEE
T ss_pred CCEEEeec-CCCCCccceeecCCEE-ECCEEEEEecccc------------cCCCCeEEEEECCCCcEE
Confidence 8 433222 11100 011111122 2678888753211 112467888998877653
No 311
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.07 E-value=0.23 Score=46.77 Aligned_cols=152 Identities=11% Similarity=0.012 Sum_probs=85.4
Q ss_pred ceEEEccCCC-EEEEec-----CCeEEEEec-C------C--ceEEeeeecCcCccCeEEcCCC-cEEEEeCC----Cce
Q 022967 80 EDVCVDRNGV-LYTATR-----DGWIKRLHK-N------G--TWENWKLIGGDTLLGITTTQEN-EILVCDAD----KGL 139 (289)
Q Consensus 80 ~~l~~d~~g~-l~v~~~-----~g~i~~~~~-~------g--~~~~~~~~~~~p~~gl~~d~~g-~l~v~~~~----~~i 139 (289)
.++.+.++|+ |++... +..|+.++. + + ....+........ . .+.++| .||+.... ..|
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~s~~~~~~~~l 313 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-D-YVTNEGTVFTFKTNRHSPNYRL 313 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-E-EEEEETTEEEEEECTTCTTCEE
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-E-EEeccCCEEEEEECCCCCCCEE
Confidence 3678888887 444332 567888884 3 4 3444433222222 2 344555 46666432 248
Q ss_pred EEEe-CCC-e---EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe-EEEe
Q 022967 140 LKVT-EEG-V---TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-TSIL 213 (289)
Q Consensus 140 ~~~~-~~g-~---~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~-~~~~ 213 (289)
+.++ .++ . +.+...... ....++.+.+++.++++... .....|+.++..+++ ...+
T Consensus 314 ~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~lv~~~~~---------------~g~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 314 INIDFTDPEESKWKVLVPEHEK---DVLEWVACVRSNFLVLCYLH---------------DVKNTLQLHDLATGALLKIF 375 (710)
T ss_dssp EEEETTSCCGGGCEEEECCCSS---CEEEEEEEETTTEEEEEEEE---------------TTEEEEEEEETTTCCEEEEE
T ss_pred EEEeCCCCCcccceeccCCCCC---CeEEEEEEEcCCEEEEEEEE---------------CCEEEEEEEECCCCCEEEec
Confidence 8888 444 2 444332111 23456777777778776431 123468899984454 3444
Q ss_pred eCCCCCcceEEEecCCCEEEEEeCC---CCeEEEEEecCCC
Q 022967 214 LDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKGES 251 (289)
Q Consensus 214 ~~~~~~p~gl~~~~d~~~l~v~~~~---~~~i~~~~~~~~~ 251 (289)
........+++++++++.++++-+. -..|+.||+.+.+
T Consensus 376 ~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 376 PLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3333334567788888877766432 3579999986543
No 312
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.00 E-value=0.27 Score=46.64 Aligned_cols=149 Identities=9% Similarity=0.057 Sum_probs=81.9
Q ss_pred ceEEEccCCC-EEEEec-----CCeEEEEe-cCC--c-eEEeeeecCcCccCeEEcCCC-cEEEEeCC----CceEEEe-
Q 022967 80 EDVCVDRNGV-LYTATR-----DGWIKRLH-KNG--T-WENWKLIGGDTLLGITTTQEN-EILVCDAD----KGLLKVT- 143 (289)
Q Consensus 80 ~~l~~d~~g~-l~v~~~-----~g~i~~~~-~~g--~-~~~~~~~~~~p~~gl~~d~~g-~l~v~~~~----~~i~~~~- 143 (289)
.++.+.+||+ |++... ...|+.++ .++ . ...+........ .... ++| .||+.... ..|++++
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~-~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFVD-GVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EEEE-EETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-EEEe-ccCCEEEEEECCCCCCCEEEEEeC
Confidence 3577888886 444332 34788888 344 4 454443222222 3333 444 56666432 2488888
Q ss_pred CC--C-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCC
Q 022967 144 EE--G-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFF 219 (289)
Q Consensus 144 ~~--g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~ 219 (289)
.+ + .+.+..... ....++.+. ++.++++... .....|+.++.+++....+.. +...
T Consensus 349 ~~~~~~~~~l~~~~~----~~l~~~~~~-~~~lv~~~~~---------------dg~~~l~~~~~~g~~~~~l~~~~~~~ 408 (741)
T 1yr2_A 349 SGSTPRFDTVVPESK----DNLESVGIA-GNRLFASYIH---------------DAKSQVLAFDLDGKPAGAVSLPGIGS 408 (741)
T ss_dssp SSSSCEEEEEECCCS----SEEEEEEEE-BTEEEEEEEE---------------TTEEEEEEEETTSCEEEECBCSSSCE
T ss_pred CCCccccEEEecCCC----CeEEEEEEE-CCEEEEEEEE---------------CCEEEEEEEeCCCCceeeccCCCCeE
Confidence 44 4 444433211 123455565 5667776421 123578889876555544432 2333
Q ss_pred cceEEEecCCCEEEEEeCC---CCeEEEEEecCC
Q 022967 220 ANGVALSKDEDYLVVCETF---KFRCLKYWLKGE 250 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~~---~~~i~~~~~~~~ 250 (289)
..++.+++|++.++++-+. -..|+.||+.+.
T Consensus 409 v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 409 ASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 4667888988877765432 257888887643
No 313
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.99 E-value=0.083 Score=49.74 Aligned_cols=149 Identities=9% Similarity=-0.015 Sum_probs=83.1
Q ss_pred eEEEccCCC-EEEEecCC----eEEEEe-cCCceEEeeeecCcCccCeEEcCCCcEEEEeC----CCceEEEe-CCC-e-
Q 022967 81 DVCVDRNGV-LYTATRDG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDA----DKGLLKVT-EEG-V- 147 (289)
Q Consensus 81 ~l~~d~~g~-l~v~~~~g----~i~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~l~v~~~----~~~i~~~~-~~g-~- 147 (289)
++.+.++|+ |++...++ .|+.++ .++....+........ ...+ ++|.+|+... ...|++++ .++ .
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY-EVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE-EEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE-EEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 567888886 44444333 677776 3556655544333333 4444 3455777643 24588888 444 3
Q ss_pred --EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-CCCcceEE
Q 022967 148 --TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVA 224 (289)
Q Consensus 148 --~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~~~p~gl~ 224 (289)
+.+...... ....++.+. ++.++++... ....+|+.++.+++....+... .....+++
T Consensus 309 ~~~~l~~~~~~---~~l~~~~~~-~~~lv~~~~~---------------dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~ 369 (695)
T 2bkl_A 309 SWKEIVPEDSS---ASLLSVSIV-GGHLSLEYLK---------------DATSEVRVATLKGKPVRTVQLPGVGAASNLM 369 (695)
T ss_dssp GCEEEECCCSS---CEEEEEEEE-TTEEEEEEEE---------------TTEEEEEEEETTCCEEEECCCSSSSEECCCB
T ss_pred CCeEEecCCCC---CeEEEEEEE-CCEEEEEEEE---------------CCEEEEEEEeCCCCeeEEecCCCCeEEEEee
Confidence 444432111 223456666 6677776421 1235788888765544444221 23345677
Q ss_pred EecCCCEEEEEeCC---CCeEEEEEecCC
Q 022967 225 LSKDEDYLVVCETF---KFRCLKYWLKGE 250 (289)
Q Consensus 225 ~~~d~~~l~v~~~~---~~~i~~~~~~~~ 250 (289)
+++|++.++++-+. -..|+.||+++.
T Consensus 370 ~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 370 GLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp SCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred cCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 88888877765432 246888887653
No 314
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.93 E-value=0.77 Score=40.07 Aligned_cols=142 Identities=11% Similarity=0.054 Sum_probs=75.0
Q ss_pred ceEEEccCCC-EEEEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC--eEEEEec
Q 022967 80 EDVCVDRNGV-LYTATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLASH 153 (289)
Q Consensus 80 ~~l~~d~~g~-l~v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g--~~~~~~~ 153 (289)
.++++ +++ |+++..+|.|..++ .+++...... ...... .++++ ++.++.+..+..+..++ .++ ......
T Consensus 177 ~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~- 251 (435)
T 1p22_A 177 LCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-HLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRV- 251 (435)
T ss_dssp EEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-EEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEE-
T ss_pred EEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE-EEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeE-
Confidence 34444 444 44777888899998 4555432222 223334 67775 34555555555577777 444 321111
Q ss_pred cCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeC-CCCCcceEEEecCCCEE
Q 022967 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALSKDEDYL 232 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~~~p~gl~~~~d~~~l 232 (289)
..+. ......+.+ +|...++.. ..+.|..+|..+++...... .......+++ +++.+
T Consensus 252 ~~~~-~~~v~~~~~--~~~~l~s~~-----------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 309 (435)
T 1p22_A 252 LVGH-RAAVNVVDF--DDKYIVSAS-----------------GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLV 309 (435)
T ss_dssp ECCC-SSCEEEEEE--ETTEEEEEE-----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEE
T ss_pred ecCC-CCcEEEEEe--CCCEEEEEe-----------------CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEE
Confidence 1111 113345555 554444322 24678888887665543332 2233344555 46655
Q ss_pred EEEeCCCCeEEEEEecC
Q 022967 233 VVCETFKFRCLKYWLKG 249 (289)
Q Consensus 233 ~v~~~~~~~i~~~~~~~ 249 (289)
+.+ ...+.|..||+..
T Consensus 310 ~~g-~~dg~i~iwd~~~ 325 (435)
T 1p22_A 310 VSG-SSDNTIRLWDIEC 325 (435)
T ss_dssp EEE-ETTSCEEEEETTT
T ss_pred EEE-eCCCeEEEEECCC
Confidence 555 4568899999864
No 315
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.92 E-value=1.1 Score=41.60 Aligned_cols=85 Identities=12% Similarity=0.053 Sum_probs=47.0
Q ss_pred CCCEEEEEeCCCCeEEEee-CCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCCceeeCCC
Q 022967 196 PHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPD 274 (289)
Q Consensus 196 ~~g~i~~~~~~~~~~~~~~-~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 274 (289)
..+.|+.+|+.+++..--. .+...-.+ .+...++.+|++ +..+.|+.||.++.+..............| +....+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g-~~~tagg~vf~g-t~dg~l~A~D~~tG~~lW~~~l~~g~~~~P--~~y~~~ 526 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGG-TMATAGDLVFYG-TLDGYLKARDSDTGDLLWKFKIPSGAIGYP--MTYTHK 526 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSB-CEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEET
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCc-ceEecCCEEEEE-CCCCeEEEEECCCCCEEEEeeCCCCcEecc--EEEEeC
Confidence 3478999999988754222 12222223 223356668876 456889999976543322111111111222 444467
Q ss_pred CCEEEEEeCc
Q 022967 275 GSFWIAILQV 284 (289)
Q Consensus 275 G~lwv~~~~g 284 (289)
|..||+...|
T Consensus 527 G~qyv~~~~G 536 (599)
T 1w6s_A 527 GTQYVAIYYG 536 (599)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 8999998765
No 316
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.46 E-value=1.2 Score=38.88 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=72.2
Q ss_pred ccCCCE-EEEecCCeEEEEe-cCCceEEeeee-cCcCccCeEEcCCCc-EEEEeCCCceEEEe-CCC--eEEEEeccCCc
Q 022967 85 DRNGVL-YTATRDGWIKRLH-KNGTWENWKLI-GGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG--VTVLASHVNGS 157 (289)
Q Consensus 85 d~~g~l-~v~~~~g~i~~~~-~~g~~~~~~~~-~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~-~~g--~~~~~~~~~~~ 157 (289)
..+|+. .++..+|.|..++ .+++....... .+... .+++ +++ |+.+..+..|..++ .++ ...+...
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h---- 212 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHH---- 212 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCC----
T ss_pred EECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC----
Confidence 335554 4777899999999 45554433322 23334 6777 444 44445445577777 556 3333211
Q ss_pred cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE---EeeC-CCCCcceEEEecCCCEEE
Q 022967 158 RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS---ILLD-SLFFANGVALSKDEDYLV 233 (289)
Q Consensus 158 ~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~---~~~~-~~~~p~gl~~~~d~~~l~ 233 (289)
......+.+++ +.++.+.. .+.|..+|..+++.. .... .......+++ +++.++
T Consensus 213 -~~~v~~l~~~~-~~l~s~s~------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 270 (435)
T 1p22_A 213 -CEAVLHLRFNN-GMMVTCSK------------------DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIV 270 (435)
T ss_dssp -CSCEEEEECCT-TEEEEEET------------------TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred -CCcEEEEEEcC-CEEEEeeC------------------CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEE
Confidence 12344555542 23333322 356777776654321 1222 2223345555 677666
Q ss_pred EEeCCCCeEEEEEecCC
Q 022967 234 VCETFKFRCLKYWLKGE 250 (289)
Q Consensus 234 v~~~~~~~i~~~~~~~~ 250 (289)
.+ ...+.|..||+...
T Consensus 271 s~-~~dg~i~vwd~~~~ 286 (435)
T 1p22_A 271 SA-SGDRTIKVWNTSTC 286 (435)
T ss_dssp EE-ETTSEEEEEETTTC
T ss_pred EE-eCCCeEEEEECCcC
Confidence 65 44688999987643
No 317
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=95.16 E-value=1.4 Score=42.23 Aligned_cols=150 Identities=10% Similarity=0.043 Sum_probs=82.1
Q ss_pred CCcceEEEcc--CCCEEEEecCCeEEEEecCCc-eEEeeeec------CcCccCeEEcCC--CcEEEEeCC------Cce
Q 022967 77 NGPEDVCVDR--NGVLYTATRDGWIKRLHKNGT-WENWKLIG------GDTLLGITTTQE--NEILVCDAD------KGL 139 (289)
Q Consensus 77 ~~p~~l~~d~--~g~l~v~~~~g~i~~~~~~g~-~~~~~~~~------~~p~~gl~~d~~--g~l~v~~~~------~~i 139 (289)
....+|++++ .+.+|++...+.|++-+..|+ ++.+.... ......|++|+. +.+|++... .+|
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEE
Confidence 3456788887 367899888788988875553 54433211 122227888864 468887532 356
Q ss_pred EEEeCCC--eEEEEeccCCc---cc-cCccceEEcCC--CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 140 LKVTEEG--VTVLASHVNGS---RI-NLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 140 ~~~~~~g--~~~~~~~~~~~---~~-~~~~~l~~~~d--G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
++-++.| .+.+....... .. .....|+++|. +.+|+... .+.|++-+-.+...+
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~------------------~~gl~~S~DgG~TW~ 156 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR------------------TEGIWKSSDRAKTWT 156 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS------------------SSCEEEESSTTSSCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec------------------cCCEEEECCCCcccC
Confidence 6665556 55543211100 00 12346888873 46887642 145766543333455
Q ss_pred EeeCC------CCCcceEEEec-CCCEEEEEeCCCCeEEE
Q 022967 212 ILLDS------LFFANGVALSK-DEDYLVVCETFKFRCLK 244 (289)
Q Consensus 212 ~~~~~------~~~p~gl~~~~-d~~~l~v~~~~~~~i~~ 244 (289)
.+... ......++++| +.+.+|++......|++
T Consensus 157 ~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 157 NVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp EETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred CCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 44321 01223466776 45578887643355654
No 318
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.94 E-value=1.2 Score=36.27 Aligned_cols=144 Identities=14% Similarity=0.025 Sum_probs=81.1
Q ss_pred ceEEEccCCCEEEEecCCeEEEEe-cCCceEEeeee--cCcCccCeEEcCCCcEEEEeCCC-ceEEEe-CCC--eEEEEe
Q 022967 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLI--GGDTLLGITTTQENEILVCDADK-GLLKVT-EEG--VTVLAS 152 (289)
Q Consensus 80 ~~l~~d~~g~l~v~~~~g~i~~~~-~~g~~~~~~~~--~~~p~~gl~~d~~g~l~v~~~~~-~i~~~~-~~g--~~~~~~ 152 (289)
..|+..+++.|-++ .++.|..++ .+|+....... .....+.+++.++|+++++.... .+..++ .++ +..+..
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 44778777644455 478899999 56765543322 22223389999999876654444 455566 556 333221
Q ss_pred ccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe--EEEeeCCCCCcceEEEecCCC
Q 022967 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--TSILLDSLFFANGVALSKDED 230 (289)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~~~~~~~~p~gl~~~~d~~ 230 (289)
+...-..+..++.+.++... .+.+..++...+. ...+.........++++++++
T Consensus 108 -------h~~~~~~~~~~~~~l~s~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 108 -------HSARVGSLSWNSYILSSGSR-----------------SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 163 (318)
T ss_dssp -------CSSCEEEEEEETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred -------ccceEEEeecCCCEEEEEec-----------------CCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC
Confidence 11222344455555444322 2445445444322 222333344556778889998
Q ss_pred EEEEEeCCCCeEEEEEecC
Q 022967 231 YLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~ 249 (289)
.++.+ ...+.|..||+..
T Consensus 164 ~l~s~-~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 164 HLASG-GNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEE-ETTSCEEEEESSC
T ss_pred EEEEE-ecCcceeEEECCC
Confidence 66555 4557899998764
No 319
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.88 E-value=1.9 Score=37.98 Aligned_cols=160 Identities=10% Similarity=-0.055 Sum_probs=85.3
Q ss_pred CcceEEEccC-CCEE-EEecCCeEEEEe-cCCceEEeee-ecCcCccCeEEcCCCc-EEEEeCCCceEEEeCCC--eEEE
Q 022967 78 GPEDVCVDRN-GVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENE-ILVCDADKGLLKVTEEG--VTVL 150 (289)
Q Consensus 78 ~p~~l~~d~~-g~l~-v~~~~g~i~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~-l~v~~~~~~i~~~~~~g--~~~~ 150 (289)
...++++.++ ++++ ++..+|.|..|| .++....... ...... .++++++|+ |+++...+.|..++..+ ...+
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~-~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT-SVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE-EEEECTTSSCEEEEETTSCEEEECTTCCEEEEE
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee-EEEEcCCCCEEEEEcCCCcEEEEccCCcccccc
Confidence 4667899986 6766 567889999999 4443221111 123455 899999986 44555545677777445 3332
Q ss_pred EeccCCc--cccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC------eEEEeeC------C
Q 022967 151 ASHVNGS--RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN------ETSILLD------S 216 (289)
Q Consensus 151 ~~~~~~~--~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~------~~~~~~~------~ 216 (289)
....... ......++.+++++.+.++.... -| ..+ ....+..++..+. .+..+.+ +
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~-dg-------~~~--~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 299 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA-DG-------TLE--TSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCT 299 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEET-TC-------CSS--SCCEEEEEECCCTTTCCCCEEEECCCSSCCCCS
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccC-CC-------ccC--CCCceEEEEeccCCCCCCcceEecccCCCCCCC
Confidence 2111100 01145577888877655432110 00 000 0122444443322 1122211 2
Q ss_pred CCCcceEEEe--cCCCEEEEEeCCCCeEEEEEecC
Q 022967 217 LFFANGVALS--KDEDYLVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 217 ~~~p~gl~~~--~d~~~l~v~~~~~~~i~~~~~~~ 249 (289)
.+.| .+.+. +|.+.+|++.+....|..+...+
T Consensus 300 ~r~~-~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 300 ERQH-HYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp SSCC-CEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred CcCc-ceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 2223 34444 78889999999888887777654
No 320
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.18 E-value=2.4 Score=36.33 Aligned_cols=183 Identities=9% Similarity=-0.002 Sum_probs=85.5
Q ss_pred CCCEEEEe---cCCeEEEEe--cCCceEEee-eecCcCccCeEEcC---CCcEEEEeCC-CceEEEe-CCC--eEEEEec
Q 022967 87 NGVLYTAT---RDGWIKRLH--KNGTWENWK-LIGGDTLLGITTTQ---ENEILVCDAD-KGLLKVT-EEG--VTVLASH 153 (289)
Q Consensus 87 ~g~l~v~~---~~g~i~~~~--~~g~~~~~~-~~~~~p~~gl~~d~---~g~l~v~~~~-~~i~~~~-~~g--~~~~~~~ 153 (289)
+|++..+. .++.|..++ ++|+...-. ....... .++|.+ ++.++++... +.|..+| ++| +..+...
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 45555443 256666665 556543321 1112222 445544 6788887544 4455567 667 5555321
Q ss_pred cCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEee-----CCCCCcceEEEecC
Q 022967 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-----DSLFFANGVALSKD 228 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~-----~~~~~p~gl~~~~d 228 (289)
.........+++.|||.+.++.... .. ...+..+...+.|..+|+++++...+. ++... .-+..+.+
T Consensus 223 --~~~v~~v~~vafSpdG~~lvs~s~~-~~----~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~-~~lsg~~s 294 (356)
T 2w18_A 223 --DSYQASVCHKAYSEMGLLFIVLSHP-CA----KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG-RFLEGDVK 294 (356)
T ss_dssp --C---CCCEEEEEEETTEEEEEEC-----------------CCEEEEEEETTTTEEEEEEEECCCTTCCC-CEEEEEEE
T ss_pred --CcceeeeEEEEECCCCCEEEEeccC-CC----cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc-eeEccccC
Confidence 1112245567899999876653210 00 001222334456667788877643221 11110 11122222
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeeeeccCCCCCC-ceeeCCCCCEEEEEe
Q 022967 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPD-NIKLAPDGSFWIAIL 282 (289)
Q Consensus 229 ~~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~i~~d~~G~lwv~~~ 282 (289)
+. +.++-...+.|..||+...+.. ..+. .....+. .+++.++|.+.++..
T Consensus 295 g~-~lASgS~DgTIkIWDl~tGk~l--~tL~-gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 295 DH-CAAAILTSGTIAIWDLLLGQCT--ALLP-PVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp TT-EEEEEETTSCEEEEETTTCSEE--EEEC-CC--CCCCEEEECSSSSEEEEEC
T ss_pred CC-EEEEEcCCCcEEEEECCCCcEE--EEec-CCCCCeEEEEEECCCCCEEEEEE
Confidence 33 4555555688999998754321 1121 1111222 367888887655543
No 321
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.15 E-value=0.73 Score=43.29 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=56.0
Q ss_pred ceEEEeCCC-eEEEEec--cCCccccCccceEEcCCCc-E-EEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEE
Q 022967 138 GLLKVTEEG-VTVLASH--VNGSRINLADDLIAATDGS-I-YFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (289)
Q Consensus 138 ~i~~~~~~g-~~~~~~~--~~~~~~~~~~~l~~~~dG~-l-yv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~ 212 (289)
.++|...++ .+++.+. ..........++.++|||+ | |..+.. +.....|+.+|.++++...
T Consensus 104 ~~~r~~~~~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~ 169 (693)
T 3iuj_A 104 VLWRQQEGKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLE 169 (693)
T ss_dssp EEEEECTTSCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEE
T ss_pred EEEEeCCCCCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCc
Confidence 355644444 5555432 1222223566789999996 3 333321 1112468899998887543
Q ss_pred eeCCCCCcceEEEecCCCEEEEEeCC------------CCeEEEEEecCC
Q 022967 213 LLDSLFFANGVALSKDEDYLVVCETF------------KFRCLKYWLKGE 250 (289)
Q Consensus 213 ~~~~~~~p~gl~~~~d~~~l~v~~~~------------~~~i~~~~~~~~ 250 (289)
.........+++|+ |++.|+++... ..+|+++++.+.
T Consensus 170 ~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 218 (693)
T 3iuj_A 170 TPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTA 218 (693)
T ss_dssp EEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSC
T ss_pred cccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCC
Confidence 21111112567999 99988887543 256888887654
No 322
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.87 E-value=2.7 Score=39.95 Aligned_cols=146 Identities=12% Similarity=0.055 Sum_probs=77.3
Q ss_pred ceEEEc-cCCCE-E-EEecCC----eEEEEe-cCC-ce--EEeeeecCcCccCeEEcCCCc-EEEEeCC-----CceEEE
Q 022967 80 EDVCVD-RNGVL-Y-TATRDG----WIKRLH-KNG-TW--ENWKLIGGDTLLGITTTQENE-ILVCDAD-----KGLLKV 142 (289)
Q Consensus 80 ~~l~~d-~~g~l-~-v~~~~g----~i~~~~-~~g-~~--~~~~~~~~~p~~gl~~d~~g~-l~v~~~~-----~~i~~~ 142 (289)
....+. |||+. . +.+..| .|+.++ .+| +. ..+. .... ++++.+||+ |+++... ..|++.
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~-~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNG-EIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECS-CCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---Ccee-eEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 346788 88873 3 333333 488888 344 31 1111 1134 888988884 5554321 247777
Q ss_pred e-CCC-e-EEEEeccCCccccCccceEEcCCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCC--eE--EEee
Q 022967 143 T-EEG-V-TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--ET--SILL 214 (289)
Q Consensus 143 ~-~~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--~~--~~~~ 214 (289)
+ .++ . ..++....... ...++.+++||+ |+++.... ....|+.+|.+++ +. ..+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~--~~~~~~~SpDg~~l~~~~~~~---------------~~~~l~~~d~~~~~~~~~~~~l~ 315 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPL--FSAFMYKAADTNTLCIGSQSP---------------ETAEVHLLDLRKGNAHNTLEIVR 315 (751)
T ss_dssp ETTSCGGGCEEEEECCCTT--CEEEEEECTTSSEEEEEEECS---------------SCEEEEEEESSSCTTCCCEEESS
T ss_pred ECCCCchhcEEEEecCCCc--eEEEEEECCCCCEEEEEecCC---------------CCceEEEEECCCCCCCceeEEee
Confidence 7 444 2 22221111111 234678999996 55553220 2346888988754 34 4443
Q ss_pred CCCCCcceEEEecC---CCEEEEEe-C---CCCeEEEEEecC
Q 022967 215 DSLFFANGVALSKD---EDYLVVCE-T---FKFRCLKYWLKG 249 (289)
Q Consensus 215 ~~~~~p~gl~~~~d---~~~l~v~~-~---~~~~i~~~~~~~ 249 (289)
.... +..++++ ++.||+.. . .+.+|+++++++
T Consensus 316 ~~~~---~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 316 PREK---GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCCT---TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred cCCC---CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 3322 2223333 77676653 3 346899998764
No 323
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=93.68 E-value=5 Score=38.20 Aligned_cols=149 Identities=12% Similarity=0.027 Sum_probs=80.1
Q ss_pred CCcceEEEccC--CCEEEEecCCeEEEEecCCc-eEEeeeec------------CcCccCeEEcC--CCcEEEEeC----
Q 022967 77 NGPEDVCVDRN--GVLYTATRDGWIKRLHKNGT-WENWKLIG------------GDTLLGITTTQ--ENEILVCDA---- 135 (289)
Q Consensus 77 ~~p~~l~~d~~--g~l~v~~~~g~i~~~~~~g~-~~~~~~~~------------~~p~~gl~~d~--~g~l~v~~~---- 135 (289)
.+-.+|+++|. +.+|++...|.|++-...|+ ++...... .... .|++|+ .+.+|++..
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECSCTT
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEeccccc
Confidence 35567888883 46888887788888875453 44433211 1123 677876 357898753
Q ss_pred ---CCceEEEeCCC--eEEEEeccCC--c-ccc-CccceEEcCC--CcEEEeeCCCccCccccccccceecCCCEEEEEe
Q 022967 136 ---DKGLLKVTEEG--VTVLASHVNG--S-RIN-LADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYD 204 (289)
Q Consensus 136 ---~~~i~~~~~~g--~~~~~~~~~~--~-~~~-~~~~l~~~~d--G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 204 (289)
..+|++-++.| .+.+.....- . .-+ ....|+++|. +.+|+... .+.|++=+
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------------------~~~l~~S~ 161 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR------------------TQGLWRST 161 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------------------SSCEEEES
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC------------------CCcEEEEC
Confidence 24566666556 5554321110 0 001 1136888874 67888742 14566653
Q ss_pred CCCCeEEEeeCC---C---CCcceEEEecC-CCEEEEEeCCCCeEEE
Q 022967 205 PSLNETSILLDS---L---FFANGVALSKD-EDYLVVCETFKFRCLK 244 (289)
Q Consensus 205 ~~~~~~~~~~~~---~---~~p~gl~~~~d-~~~l~v~~~~~~~i~~ 244 (289)
-.+...+.+... . .....|+++|. .+.+|++......|++
T Consensus 162 DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~ 208 (763)
T 3a0f_A 162 DRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWV 208 (763)
T ss_dssp STTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEE
T ss_pred CCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEE
Confidence 333344444311 0 11235677763 3458887554323544
No 324
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=92.69 E-value=6.9 Score=37.03 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=59.5
Q ss_pred CcceEEEccC--CCEEEEecCCeEEEEecCC-ceEEeeeec------CcCccCeEEcCC--CcEEEEeC---------CC
Q 022967 78 GPEDVCVDRN--GVLYTATRDGWIKRLHKNG-TWENWKLIG------GDTLLGITTTQE--NEILVCDA---------DK 137 (289)
Q Consensus 78 ~p~~l~~d~~--g~l~v~~~~g~i~~~~~~g-~~~~~~~~~------~~p~~gl~~d~~--g~l~v~~~---------~~ 137 (289)
...+|++++. +.+|++...+.|+|.+..| .++.+.... ......|++|+. +.+|++.. ..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 5667899874 7899988778899997555 345433211 111227888863 47998853 13
Q ss_pred ceEEEeCCC--eEEEEeccC-Cc---cccCccceEEcCC--CcEEEee
Q 022967 138 GLLKVTEEG--VTVLASHVN-GS---RINLADDLIAATD--GSIYFSV 177 (289)
Q Consensus 138 ~i~~~~~~g--~~~~~~~~~-~~---~~~~~~~l~~~~d--G~lyv~~ 177 (289)
+|++-.+.| .+.+..... +. .......|+++|. +.||++.
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 577766556 555432211 00 0112357899874 4788875
No 325
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=91.72 E-value=9.3 Score=36.34 Aligned_cols=183 Identities=13% Similarity=0.095 Sum_probs=89.6
Q ss_pred ceEEEccC--CCEEEEec--CCeEEEEecCC-ceEEeeeecCcCccCeEEcC--CCcEEEEeCCCceEEEeCCC--eEEE
Q 022967 80 EDVCVDRN--GVLYTATR--DGWIKRLHKNG-TWENWKLIGGDTLLGITTTQ--ENEILVCDADKGLLKVTEEG--VTVL 150 (289)
Q Consensus 80 ~~l~~d~~--g~l~v~~~--~g~i~~~~~~g-~~~~~~~~~~~p~~gl~~d~--~g~l~v~~~~~~i~~~~~~g--~~~~ 150 (289)
..++++++ ..+|++.. ++.|++-...| .++.+......-. .++.++ .+.+|+++ ..++++-...| .+.+
T Consensus 547 ~~i~v~~~~~~~~~~~~~~~~~~v~~S~D~G~tW~~~~~l~~~~~-~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~ 624 (763)
T 3a0f_A 547 GTIAVGADGKTFVWSPSKADGKGPYTSSDYGKTWTAPSGLSKQTT-GIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKK 624 (763)
T ss_dssp CEEEECTTSSCEEEECSSCCSSCCEEESSTTSCCBCCBSCCCCCS-CEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEE
T ss_pred ceEEEecCCCcEEEEecccCCCceEEeCCCCCCCeecCCCCCCcc-eEEEeccCCCEEEEEc-CCCEEEEeCCCcCcccc
Confidence 34677763 35787663 44565554334 3333311111113 577765 34688886 35566655555 5555
Q ss_pred EeccCCccccCccceEEcC--CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcce---EEE
Q 022967 151 ASHVNGSRINLADDLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANG---VAL 225 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~--dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~g---l~~ 225 (289)
....+....... -|.+.+ ++.||++... +.||+-+-.+...+.+. ++..... +.|
T Consensus 625 ~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~------------------~~l~~S~D~G~tW~~~~-~~~~~~~~~~~~~ 684 (763)
T 3a0f_A 625 GNGLPCCWTYTG-TPVTSNLRAGELWVSVKG------------------VGIYHSTDFGNTFTALA-GSGSSLNPAVFSI 684 (763)
T ss_dssp CBTSCCSSCCCE-EEEECSSSTTCEEEEETT------------------TEEEEESSTTSBCEECT-TBTTTBEEEEEEE
T ss_pred ccCCCcccCccc-cEEECCCCCCcEEEEcCC------------------CeEEEEcCCCCCceEcc-CCCcccccceeEE
Confidence 332220000111 166666 5789997632 46877754444565553 2221111 222
Q ss_pred ----e-cCCCEEEEEe--C--CCCeEEEEEecCCCCcceeeeeccCCCCC--CceeeCC--CCCEEEEEeCcccc
Q 022967 226 ----S-KDEDYLVVCE--T--FKFRCLKYWLKGESKEQTEIFVENLPGGP--DNIKLAP--DGSFWIAILQVFIS 287 (289)
Q Consensus 226 ----~-~d~~~l~v~~--~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~p--~~i~~d~--~G~lwv~~~~g~i~ 287 (289)
. ++...||++- . ....|++=+-.|.+- +.+.+....+| ..|+.|. .++||+++.+.|+.
T Consensus 685 g~~~~~~~~~~l~~~G~~~~~~~~gl~~S~D~G~tW---~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T~GrGi~ 756 (763)
T 3a0f_A 685 GAPQTPNATETLFLWGIPSASQPEGLYMSTDNGGLW---TRLNDDAHNYGGATVISGDPRIYGRVYIGMNGRGII 756 (763)
T ss_dssp ECCSSTTSSCEEEEEEECSTTSCSEEEEESSTTSCC---EECSCTTCCTBCEEEEEECTTSTTEEEEEEBSSCEE
T ss_pred eeecCCCCCceEEEEEEcccCCCcEEEEeCCCCCCc---EeccCccccCCCcceEEeCCCCCCEEEEeCCCCeEE
Confidence 2 2345688764 1 235666543223222 12211111122 2578885 35799999887763
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.26 E-value=0.93 Score=38.71 Aligned_cols=59 Identities=17% Similarity=0.226 Sum_probs=34.6
Q ss_pred CCCEEEEecCCeEEEEe-cCCceEEeeeec--CcCccCeE---EcCCCcEEEEe--CCCceEEEe-CCC
Q 022967 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIG--GDTLLGIT---TTQENEILVCD--ADKGLLKVT-EEG 146 (289)
Q Consensus 87 ~g~l~v~~~~g~i~~~~-~~g~~~~~~~~~--~~p~~gl~---~d~~g~l~v~~--~~~~i~~~~-~~g 146 (289)
+|.+|+++.+|.|+.++ .+|+........ ..+. ... ...++.+|+.. ....++.++ .+|
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 46888999999999999 677654332222 1111 110 11245677664 235588888 566
No 327
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.21 E-value=4.2 Score=37.78 Aligned_cols=112 Identities=12% Similarity=-0.011 Sum_probs=65.8
Q ss_pred CeEEcC-CCcEEEEeCC------------CceEEEe-CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCcc
Q 022967 121 GITTTQ-ENEILVCDAD------------KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLH 185 (289)
Q Consensus 121 gl~~d~-~g~l~v~~~~------------~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~ 185 (289)
..++.+ +|+||+.... ..++.+| ..+ .+.+... +.....+..+.++..+|+||+.-+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~-~~~~~~~~~~~~~~~~g~lyv~GG~------ 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT-VTKHDMFCPGISMDGNGQIVVTGGN------ 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE-ECSCCCSSCEEEECTTSCEEEECSS------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc-CCCCCCccccccCCCCCCEEEeCCC------
Confidence 555555 7889987311 1367777 455 4332211 1111223446777889999998543
Q ss_pred ccccccceecCCCEEEEEeCCCCeEEEeeCC--CCCcceEEEecCCCEEEEEeC-C-----CCeEEEEEecCC
Q 022967 186 NWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLVVCET-F-----KFRCLKYWLKGE 250 (289)
Q Consensus 186 ~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~--~~~p~gl~~~~d~~~l~v~~~-~-----~~~i~~~~~~~~ 250 (289)
....+++||+.+++.+.+..- -+.-...++.++++ +|+.-. . ...+.+||+...
T Consensus 263 ----------~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 263 ----------DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp ----------STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ----------CCCceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCC
Confidence 123689999998888766421 22223455666787 777633 1 156888987643
No 328
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.83 E-value=10 Score=35.18 Aligned_cols=120 Identities=13% Similarity=0.107 Sum_probs=61.2
Q ss_pred EEEccCCCEEEEe--cCCeEEEEe-cCCceEEeeeec-CcC-ccCeEEcCCCcEEEEeCC-------CceEEEe-CCC-e
Q 022967 82 VCVDRNGVLYTAT--RDGWIKRLH-KNGTWENWKLIG-GDT-LLGITTTQENEILVCDAD-------KGLLKVT-EEG-V 147 (289)
Q Consensus 82 l~~d~~g~l~v~~--~~g~i~~~~-~~g~~~~~~~~~-~~p-~~gl~~d~~g~l~v~~~~-------~~i~~~~-~~g-~ 147 (289)
+++..+|.||+.- ....++++| ..+++....... .+- + +.++-++|+|||.... ..+.++| ..+ .
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~-s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ-SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC-EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc-ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 5666789999543 345799998 445555543211 121 2 4555568899997531 3478888 555 5
Q ss_pred EEEEeccCCccccCc-cceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEE
Q 022967 148 TVLASHVNGSRINLA-DDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~-~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 211 (289)
+.+... ...++... ...++..++++|+..... + .++.......+..||++++...
T Consensus 327 ~~~~~~-~~~p~~~~~~~~~~~~~~~iyv~Gg~~--g------~~~~~~~~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 327 TSLPNA-KVNPMLTADKQGLYRSDNHAWLFGWKK--G------SVFQAGPSTAMNWYYTSGSGDV 382 (656)
T ss_dssp EEETTS-CSGGGCCCCTTGGGTTTCSCCEEECGG--G------CEEECCSSSEEEEEECSTTCEE
T ss_pred eeCCCc-cccccccccccceeecCCceEEEECCC--C------cEEEecCccceeeeecCCccee
Confidence 554210 00111111 011223466676654320 0 1111122357889999876543
No 329
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=89.14 E-value=1.9 Score=40.89 Aligned_cols=75 Identities=12% Similarity=0.014 Sum_probs=45.4
Q ss_pred CccceEEc-CCCc-EEEeeCCCccCccccccccceecCCCEEEEEeCCCC-eEEEeeCCCC-CcceEEEecCCCEEEEEe
Q 022967 161 LADDLIAA-TDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLDSLF-FANGVALSKDEDYLVVCE 236 (289)
Q Consensus 161 ~~~~l~~~-~dG~-lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~~~~-~p~gl~~~~d~~~l~v~~ 236 (289)
...+..++ |||+ |.++... .+.....|+.+|.+++ +. +.+.+. ...+++|+||++.|+++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-------------~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-------------SGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-------------SSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-------------CCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEE
Confidence 34577999 9996 5444321 0111235999999877 52 111111 135789999998887765
Q ss_pred CCC----CeEEEEEecCC
Q 022967 237 TFK----FRCLKYWLKGE 250 (289)
Q Consensus 237 ~~~----~~i~~~~~~~~ 250 (289)
... .+|+++++.+.
T Consensus 240 ~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKL 257 (751)
T ss_dssp ECTTCCEEEEEEEETTSC
T ss_pred ECCCCCCCEEEEEECCCC
Confidence 421 36888887654
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.85 E-value=1.2 Score=40.60 Aligned_cols=84 Identities=14% Similarity=0.208 Sum_probs=58.2
Q ss_pred EEEEEeCCC-----CeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEecC------CCC-cceeeee--ccCCC
Q 022967 199 KLLKYDPSL-----NETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG------ESK-EQTEIFV--ENLPG 264 (289)
Q Consensus 199 ~i~~~~~~~-----~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~------~~~-~~~~~~~--~~~~~ 264 (289)
++-.+|... ..+..+..-...|.|+.++|||++++++.-...++.+|+.+. .++ .-..... ..+.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466677654 234445555678999999999999999999999999999752 122 1111111 12334
Q ss_pred CCCceeeCCCCCEEEEEe
Q 022967 265 GPDNIKLAPDGSFWIAIL 282 (289)
Q Consensus 265 ~p~~i~~d~~G~lwv~~~ 282 (289)
.|.-.++|.+|+.|.+..
T Consensus 379 GPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp CEEEEEECSSSEEEEEET
T ss_pred cccEEEECCCCceEeeee
Confidence 688899999999998864
No 331
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=88.70 E-value=4.4 Score=34.71 Aligned_cols=72 Identities=8% Similarity=-0.067 Sum_probs=46.2
Q ss_pred CccceEEcC--------CCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCC-eEEEeeCCCCCcceEEEecCCCE
Q 022967 161 LADDLIAAT--------DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLDSLFFANGVALSKDEDY 231 (289)
Q Consensus 161 ~~~~l~~~~--------dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~~~~~p~gl~~~~d~~~ 231 (289)
..+++++.| ||++.++... .+.|..+|..++ ....+...-.....++|+|++..
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~-----------------D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 200 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGD-----------------DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPN 200 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEET-----------------TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEEC-----------------CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCc
Confidence 467888876 7777776532 344555554333 33333333445578999998875
Q ss_pred EEEEeCCCCeEEEEEecC
Q 022967 232 LVVCETFKFRCLKYWLKG 249 (289)
Q Consensus 232 l~v~~~~~~~i~~~~~~~ 249 (289)
++++....+.|..||+..
T Consensus 201 ~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 201 QLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEETTSEEEEEETTC
T ss_pred eEEecCCCCEEEEEECCC
Confidence 666656678899999764
No 332
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=88.35 E-value=12 Score=32.45 Aligned_cols=141 Identities=12% Similarity=0.062 Sum_probs=76.4
Q ss_pred CCcceEEEccCCCEEEEecCCeEEEEe-cCCc---------eEE--eeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-
Q 022967 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGT---------WEN--WKLIGGDTLLGITTTQENEILVCDADKGLLKVT- 143 (289)
Q Consensus 77 ~~p~~l~~d~~g~l~v~~~~g~i~~~~-~~g~---------~~~--~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~- 143 (289)
.....+++.+.+.++++....++..++ .+.. ++. .....+ +. .++| .+..|+++ .+.+|..++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f-d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF-HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE-ETTEEEEE-ESSEEEEEES
T ss_pred ccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE-CCCEEEEE-cCCcEEEEEc
Confidence 345668999877776544434566676 1111 111 122233 66 8999 33457777 446788887
Q ss_pred CCC--eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcc
Q 022967 144 EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (289)
Q Consensus 144 ~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~ 221 (289)
.+- ...... ... ...++...+. ++.+.. ..|.|+.+|.+++...... ....
T Consensus 114 ~sl~~~~~~~~-~~~----~v~~i~~~~p-~~av~~------------------~dG~L~v~dl~~~~~~~~~---~~Vs 166 (388)
T 1xip_A 114 EELSEFRTVTS-FEK----PVFQLKNVNN-TLVILN------------------SVNDLSALDLRTKSTKQLA---QNVT 166 (388)
T ss_dssp SSTTCEEEEEE-CSS----CEEEEEECSS-EEEEEE------------------TTSEEEEEETTTCCEEEEE---ESEE
T ss_pred hhhhccCccce-eec----ceeeEEecCC-CEEEEE------------------CCCCEEEEEccCCcccccc---CCce
Confidence 322 221111 110 1223332222 233332 2477888887766554432 2456
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEecCCC
Q 022967 222 GVALSKDEDYLVVCETFKFRCLKYWLKGES 251 (289)
Q Consensus 222 gl~~~~d~~~l~v~~~~~~~i~~~~~~~~~ 251 (289)
.++|+|+| +.++ ..++.+.+|+.++..
T Consensus 167 ~v~WSpkG--~~vg-~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 167 SFDVTNSQ--LAVL-LKDRSFQSFAWRNGE 193 (388)
T ss_dssp EEEECSSE--EEEE-ETTSCEEEEEEETTE
T ss_pred EEEEcCCc--eEEE-EcCCcEEEEcCCCcc
Confidence 78999999 4444 345788888877643
No 333
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=87.71 E-value=13 Score=32.19 Aligned_cols=126 Identities=9% Similarity=0.111 Sum_probs=73.0
Q ss_pred CcceEEEccCCCEEEEecCCeEEEEecCC--ceEEeeeecCcCccCeEEcCCCcEEEEeCCCceEEEe-CCC-eEEEEec
Q 022967 78 GPEDVCVDRNGVLYTATRDGWIKRLHKNG--TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLASH 153 (289)
Q Consensus 78 ~p~~l~~d~~g~l~v~~~~g~i~~~~~~g--~~~~~~~~~~~p~~gl~~d~~g~l~v~~~~~~i~~~~-~~g-~~~~~~~ 153 (289)
.+..|++ .+..|+++ .++.|..|+... +............ .+.+-.. ++.++.....++.++ +++ ...+.
T Consensus 89 ~V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~-- 162 (388)
T 1xip_A 89 DVIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA-- 162 (388)
T ss_dssp TEEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred CeeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc--
Confidence 3788899 34456677 778899998321 1111111111122 4444322 366666556677777 556 43322
Q ss_pred cCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeE---EEe------eC---CCCCcc
Q 022967 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET---SIL------LD---SLFFAN 221 (289)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~---~~~------~~---~~~~p~ 221 (289)
.....+++.|+| +.++.. .|.+..|++++++. ..+ .+ +.....
T Consensus 163 ------~~Vs~v~WSpkG-~~vg~~------------------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~ 217 (388)
T 1xip_A 163 ------QNVTSFDVTNSQ-LAVLLK------------------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPL 217 (388)
T ss_dssp ------ESEEEEEECSSE-EEEEET------------------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEE
T ss_pred ------CCceEEEEcCCc-eEEEEc------------------CCcEEEEcCCCccccccceecCCcccccccCCCeeEE
Confidence 246789999999 555532 36677778877663 233 11 235567
Q ss_pred eEEEecCCCEEEE
Q 022967 222 GVALSKDEDYLVV 234 (289)
Q Consensus 222 gl~~~~d~~~l~v 234 (289)
.|.|.+++.++.+
T Consensus 218 sI~wl~~~~flv~ 230 (388)
T 1xip_A 218 SVTILSPQDFLAV 230 (388)
T ss_dssp EEEESSSSEEEEE
T ss_pred EEEEecCCeEEEE
Confidence 8899888775554
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.71 E-value=21 Score=33.48 Aligned_cols=147 Identities=10% Similarity=0.060 Sum_probs=83.8
Q ss_pred cCCCEEE-Eec----CCeEEEEe-cCCceEEee-e------ecCc-CccCeEEcC-CCcEEEEeCC-------CceEEEe
Q 022967 86 RNGVLYT-ATR----DGWIKRLH-KNGTWENWK-L------IGGD-TLLGITTTQ-ENEILVCDAD-------KGLLKVT 143 (289)
Q Consensus 86 ~~g~l~v-~~~----~g~i~~~~-~~g~~~~~~-~------~~~~-p~~gl~~d~-~g~l~v~~~~-------~~i~~~~ 143 (289)
-++.||+ +-. .+.+++++ .++++.... . ...+ -+ +++... +|.|||.... +.++++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 4678885 321 24588888 566777665 2 1111 13 444433 7789987321 3478888
Q ss_pred -CCC-eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC-----
Q 022967 144 -EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS----- 216 (289)
Q Consensus 144 -~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~----- 216 (289)
... .+.+.. .+. -..-...++-.+|.||+.-+.. ..+.+++||+.+++++.+...
T Consensus 475 ~~t~~W~~~~~-~p~--~R~~h~~~~~~~~~iyv~GG~~---------------~~~~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 475 MKTREWSMIKS-LSH--TRFRHSACSLPDGNVLILGGVT---------------EGPAMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp TTTTEEEECCC-CSB--CCBSCEEEECTTSCEEEECCBC---------------SSCSEEEEETTTTEEEECCCSSGGGG
T ss_pred CCCCcEEECCC-CCC--CcccceEEEEcCCEEEEECCCC---------------CCCCEEEEECCCCceEEccCCCCCCC
Confidence 555 554422 111 1122344443588999975421 111699999999888876531
Q ss_pred -CCCcceEEEecCCCEEEEEeCC-------CCeEEEEEecCCC
Q 022967 217 -LFFANGVALSKDEDYLVVCETF-------KFRCLKYWLKGES 251 (289)
Q Consensus 217 -~~~p~gl~~~~d~~~l~v~~~~-------~~~i~~~~~~~~~ 251 (289)
-.....++++.+.+.+|+.... .+.+++||+....
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1122235556554568887432 3579999987654
No 335
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=86.58 E-value=9.2 Score=36.15 Aligned_cols=118 Identities=10% Similarity=0.029 Sum_probs=66.1
Q ss_pred cCccCeEEcCC--CcEEEEeCCCceEEEeCCC--eEEEEeccCCc--cccCccceEEcCC--CcEEEeeCCCccCccccc
Q 022967 117 DTLLGITTTQE--NEILVCDADKGLLKVTEEG--VTVLASHVNGS--RINLADDLIAATD--GSIYFSVASTKFGLHNWG 188 (289)
Q Consensus 117 ~p~~gl~~d~~--g~l~v~~~~~~i~~~~~~g--~~~~~~~~~~~--~~~~~~~l~~~~d--G~lyv~~~~~~~~~~~~~ 188 (289)
+.. +|++++. +.+|+.....+++|.+..| .+.+....... .......|+++|. +.+|++.......
T Consensus 24 ~i~-~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~----- 97 (737)
T 2cn3_A 24 FMP-GIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND----- 97 (737)
T ss_dssp CCC-EEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS-----
T ss_pred eee-EEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc-----
Confidence 566 8999865 5799877557899998656 55543211101 1234668999983 5799986421000
Q ss_pred cccceecCCCEEEEEeCCCCeEEEeeCCCC---------CcceEEEecC-CCEEEEEeCCCCeEEE
Q 022967 189 LDLLEAKPHGKLLKYDPSLNETSILLDSLF---------FANGVALSKD-EDYLVVCETFKFRCLK 244 (289)
Q Consensus 189 ~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~---------~p~gl~~~~d-~~~l~v~~~~~~~i~~ 244 (289)
.....+.|++-.-.+...+.+..... ....|+++|. .+.+|+.......|++
T Consensus 98 ----~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~ 159 (737)
T 2cn3_A 98 ----WLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR 159 (737)
T ss_dssp ----SSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE
T ss_pred ----cccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE
Confidence 00012567776433344554432211 1246889874 4668887422256664
No 336
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=86.58 E-value=15 Score=34.99 Aligned_cols=115 Identities=9% Similarity=0.049 Sum_probs=64.6
Q ss_pred CcCccCeEEcCC--CcEEEEeCCCceEEEeCCC--eEEEEeccCCc--cccCccceEEcCC--CcEEEeeCCCccCcccc
Q 022967 116 GDTLLGITTTQE--NEILVCDADKGLLKVTEEG--VTVLASHVNGS--RINLADDLIAATD--GSIYFSVASTKFGLHNW 187 (289)
Q Consensus 116 ~~p~~gl~~d~~--g~l~v~~~~~~i~~~~~~g--~~~~~~~~~~~--~~~~~~~l~~~~d--G~lyv~~~~~~~~~~~~ 187 (289)
++.. +|++++. +.+|++....+|++-++.| .+.+....... ......+|+++|. +.+|++.....
T Consensus 15 g~i~-~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~------ 87 (789)
T 1sqj_A 15 GYIT-GIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV------ 87 (789)
T ss_dssp SCEE-EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT------
T ss_pred CcEE-EEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC------
Confidence 3445 8888864 5788887667899888666 55432211100 1234678899984 57888753200
Q ss_pred ccccceecCCCEEEEEeCCCCeEEEeeCCCC---------CcceEEEecC-CCEEEEEeCCCCeEEE
Q 022967 188 GLDLLEAKPHGKLLKYDPSLNETSILLDSLF---------FANGVALSKD-EDYLVVCETFKFRCLK 244 (289)
Q Consensus 188 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~---------~p~gl~~~~d-~~~l~v~~~~~~~i~~ 244 (289)
....+.|++-+-.+...+.+...+. ....++++|. .+.+|+.. ....|++
T Consensus 88 ------~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~ 147 (789)
T 1sqj_A 88 ------GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWK 147 (789)
T ss_dssp ------TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEE
T ss_pred ------CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEE
Confidence 0001567766544445555533211 1245888874 45677764 2355664
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.14 E-value=14 Score=30.02 Aligned_cols=144 Identities=19% Similarity=0.232 Sum_probs=76.8
Q ss_pred CCCEEE-Eec-----CCeEEEEe-cCCc---eEEeeeec-CcCccCeEEcCCCcEEEEeC------CCceEEEe-CCC-e
Q 022967 87 NGVLYT-ATR-----DGWIKRLH-KNGT---WENWKLIG-GDTLLGITTTQENEILVCDA------DKGLLKVT-EEG-V 147 (289)
Q Consensus 87 ~g~l~v-~~~-----~g~i~~~~-~~g~---~~~~~~~~-~~p~~gl~~d~~g~l~v~~~------~~~i~~~~-~~g-~ 147 (289)
++.||+ +-. ...+++++ .+++ ++...... .+...+++. -++.||+... .+.++++| ... .
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 678884 332 24688998 4455 66553321 111103333 3678998742 13488888 555 5
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCc---ceEE
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVA 224 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p---~gl~ 224 (289)
+.+... +... ....+++ -++.||+.-+... ......+++||+.+++.+.+.. ...+ ..++
T Consensus 141 ~~~~~~-p~~r--~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~ 203 (301)
T 2vpj_A 141 SMLGDM-QTAR--EGAGLVV-ASGVIYCLGGYDG------------LNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVA 203 (301)
T ss_dssp EEEEEC-SSCC--BSCEEEE-ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEE
T ss_pred EECCCC-CCCc--ccceEEE-ECCEEEEECCCCC------------CcccceEEEEeCCCCcEEeCCC-CCcccccceEE
Confidence 555332 2111 1122222 3788998754210 0123569999999888877642 2222 1222
Q ss_pred EecCCCEEEEEeCC-----CCeEEEEEecCC
Q 022967 225 LSKDEDYLVVCETF-----KFRCLKYWLKGE 250 (289)
Q Consensus 225 ~~~d~~~l~v~~~~-----~~~i~~~~~~~~ 250 (289)
.. ++.+|+.... .+.+++||+...
T Consensus 204 ~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 204 LL--NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EE--CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 22 3458876432 357899997654
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=83.21 E-value=19 Score=30.07 Aligned_cols=156 Identities=13% Similarity=0.044 Sum_probs=77.8
Q ss_pred CCCEEEEe--cCCeEEEEecC---CceEEeeeec--CcCccCeEEcCCCcEEEEeCC-----------CceEEEe-CCC-
Q 022967 87 NGVLYTAT--RDGWIKRLHKN---GTWENWKLIG--GDTLLGITTTQENEILVCDAD-----------KGLLKVT-EEG- 146 (289)
Q Consensus 87 ~g~l~v~~--~~g~i~~~~~~---g~~~~~~~~~--~~p~~gl~~d~~g~l~v~~~~-----------~~i~~~~-~~g- 146 (289)
++.||+.- ....+++++.+ .++....... .+...+++. -++.|||.... +.++++| .+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 67898532 34579999953 5666554322 121113333 35789986321 2478888 455
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCcccccc----------------------ccceecCCCEEEEEe
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGL----------------------DLLEAKPHGKLLKYD 204 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~----------------------~~~~~~~~g~i~~~~ 204 (289)
.+.+....+ ..+.-..+++ -++.||+.-+........... ..........+++||
T Consensus 98 W~~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 98 WVKLMSHAP--MGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEECSCCCS--SCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred EEECCCCCC--cccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 554432110 1112223333 678999876531000000000 000001235799999
Q ss_pred CCCCeEEEeeCCC--CCc-ceEEEecCCCEEEEEeC------CCCeEEEEEec
Q 022967 205 PSLNETSILLDSL--FFA-NGVALSKDEDYLVVCET------FKFRCLKYWLK 248 (289)
Q Consensus 205 ~~~~~~~~~~~~~--~~p-~gl~~~~d~~~l~v~~~------~~~~i~~~~~~ 248 (289)
+.+.+.+.+..-. ... .+++.. ++.||+.-- ....+++|+++
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d 225 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFT 225 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC
T ss_pred CCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEec
Confidence 9988887764321 111 233332 445887632 13567888763
No 339
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=82.03 E-value=19 Score=29.27 Aligned_cols=148 Identities=14% Similarity=0.097 Sum_probs=76.6
Q ss_pred CCCEEE-Eec----CCeEEEEe-cCCceEEeeeecC-c-CccCeEEcCCCcEEEEeCC-------CceEEEe-CCC-eEE
Q 022967 87 NGVLYT-ATR----DGWIKRLH-KNGTWENWKLIGG-D-TLLGITTTQENEILVCDAD-------KGLLKVT-EEG-VTV 149 (289)
Q Consensus 87 ~g~l~v-~~~----~g~i~~~~-~~g~~~~~~~~~~-~-p~~gl~~d~~g~l~v~~~~-------~~i~~~~-~~g-~~~ 149 (289)
++.||+ +-. ...+++++ .++++........ + -+ +++. -++.||+.... ..++++| ... .+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 678884 322 35688888 4556665543221 1 12 3333 36789886321 3488888 555 555
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEEEec
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVALSK 227 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~~~~ 227 (289)
+.. .+... .-..+ +.-++.||+.-+..... ........+++||+++++.+.+..-. +.-..++..
T Consensus 133 ~~~-~p~~r--~~~~~-~~~~~~iyv~GG~~~~~--------~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 133 KPS-MLTQR--CSHGM-VEANGLIYVCGGSLGNN--------VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV- 199 (306)
T ss_dssp ECC-CSSCC--BSCEE-EEETTEEEEECCEESCT--------TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CCC-CcCCc--ceeEE-EEECCEEEEECCCCCCC--------CcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-
Confidence 432 12111 11122 23477899875421000 00001356999999988887774311 111223332
Q ss_pred CCCEEEEEeCC-----CCeEEEEEecCC
Q 022967 228 DEDYLVVCETF-----KFRCLKYWLKGE 250 (289)
Q Consensus 228 d~~~l~v~~~~-----~~~i~~~~~~~~ 250 (289)
+ +.||+.-.. .+.+++||+...
T Consensus 200 ~-~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 200 K-DKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp T-TEEEEECCEETTEEBCCEEEEETTTT
T ss_pred C-CEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 3 448877321 256889987654
No 340
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=81.96 E-value=19 Score=29.25 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCCEEE-Eec------CCeEEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEeC----------CCceEEEe-CCC
Q 022967 87 NGVLYT-ATR------DGWIKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCDA----------DKGLLKVT-EEG 146 (289)
Q Consensus 87 ~g~l~v-~~~------~g~i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~----------~~~i~~~~-~~g 146 (289)
++.||+ +-. ...+++++ .+.+++...... .+....++. -++.||+... .+.++++| .+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 678884 322 14588888 345565543221 111103333 3678998742 23478888 555
Q ss_pred -eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceE
Q 022967 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGV 223 (289)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl 223 (289)
.+.+.. .+.. ..-..+++ -+++||+.-+... ......+++||+++++.+.+..-. +....+
T Consensus 180 ~W~~~~~-~p~~--r~~~~~~~-~~~~i~v~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 180 TWTELCP-MIEA--RKNHGLVF-VKDKIFAVGGQNG------------LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp EEEEECC-CSSC--CBSCEEEE-ETTEEEEECCEET------------TEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred eEEECCC-ccch--hhcceEEE-ECCEEEEEeCCCC------------CCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 555532 1111 11223333 3778998743210 011246899999988887764211 111223
Q ss_pred EEecCCCEEEEEeC-----CCCeEEEEEecCCC
Q 022967 224 ALSKDEDYLVVCET-----FKFRCLKYWLKGES 251 (289)
Q Consensus 224 ~~~~d~~~l~v~~~-----~~~~i~~~~~~~~~ 251 (289)
+.. + +.+|+... ..+.+++||+...+
T Consensus 244 ~~~-~-~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 244 AAV-G-SIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEE-T-TEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEE-C-CEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 332 3 44777643 23678999987653
No 341
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=80.97 E-value=22 Score=29.16 Aligned_cols=145 Identities=10% Similarity=-0.027 Sum_probs=73.5
Q ss_pred CCCEEEEec---------CCeEEEEec-CCceEEeeeec-CcCccCeEEcCCCcEEEEeCC-------CceEEEe-CCC-
Q 022967 87 NGVLYTATR---------DGWIKRLHK-NGTWENWKLIG-GDTLLGITTTQENEILVCDAD-------KGLLKVT-EEG- 146 (289)
Q Consensus 87 ~g~l~v~~~---------~g~i~~~~~-~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~-------~~i~~~~-~~g- 146 (289)
++.||+-.. ...+++++. +++++...... .+....++. -+++||+.... +.++++| .+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 678884321 145888883 45555543211 111103333 46789987421 3488888 555
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEE
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVA 224 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~ 224 (289)
.+.+.. .+.. +.-..++ .-+++||+.-+... ......+++||+++++.+.+.... +.-.+++
T Consensus 177 W~~~~~-~p~~--r~~~~~~-~~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 177 WKELAP-MQTA--RSLFGAT-VHDGRIIVAAGVTD------------TGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp EEECCC-CSSC--CBSCEEE-EETTEEEEEEEECS------------SSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred EEECCC-CCCc--hhceEEE-EECCEEEEEeccCC------------CCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 554432 1111 1111222 23778998754210 001246899999988888774311 1112233
Q ss_pred EecCCCEEEEEeCC--------------CCeEEEEEecCC
Q 022967 225 LSKDEDYLVVCETF--------------KFRCLKYWLKGE 250 (289)
Q Consensus 225 ~~~d~~~l~v~~~~--------------~~~i~~~~~~~~ 250 (289)
.. ++ .||+.--. .+.+++||++..
T Consensus 241 ~~-~~-~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 241 SL-VG-TLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EE-TT-EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EE-CC-EEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 22 34 47775321 134778887654
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=75.35 E-value=32 Score=28.11 Aligned_cols=143 Identities=12% Similarity=0.085 Sum_probs=74.2
Q ss_pred CCCEEE-EecC-------CeEEEEe-cCCceEEeeeecC-c-CccCeEEcCCCcEEEEeC-------CCceEEEe-CCC-
Q 022967 87 NGVLYT-ATRD-------GWIKRLH-KNGTWENWKLIGG-D-TLLGITTTQENEILVCDA-------DKGLLKVT-EEG- 146 (289)
Q Consensus 87 ~g~l~v-~~~~-------g~i~~~~-~~g~~~~~~~~~~-~-p~~gl~~d~~g~l~v~~~-------~~~i~~~~-~~g- 146 (289)
++.||+ +-.+ ..++++| .+.+++....... + .+ +++. .++.||+... .+.++++| .+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 678884 4321 3477887 3455655432111 1 12 3333 4678998642 13488999 555
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCc---ceE
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGV 223 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p---~gl 223 (289)
.+.+.. .+.. .....+++ -++.||+.-+... ......+++||+++++.+.+.. ...+ ..+
T Consensus 187 W~~~~~-~p~~--r~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~ 249 (318)
T 2woz_A 187 WKDLAP-MKTP--RSMFGVAI-HKGKIVIAGGVTE------------DGLSASVEAFDLKTNKWEVMTE-FPQERSSISL 249 (318)
T ss_dssp EEEECC-CSSC--CBSCEEEE-ETTEEEEEEEEET------------TEEEEEEEEEETTTCCEEECCC-CSSCCBSCEE
T ss_pred EEECCC-CCCC--cccceEEE-ECCEEEEEcCcCC------------CCccceEEEEECCCCeEEECCC-CCCcccceEE
Confidence 555532 1111 11123333 3678998753210 0012468899999888877643 2111 222
Q ss_pred EEecCCCEEEEEeC--------------CCCeEEEEEecCC
Q 022967 224 ALSKDEDYLVVCET--------------FKFRCLKYWLKGE 250 (289)
Q Consensus 224 ~~~~d~~~l~v~~~--------------~~~~i~~~~~~~~ 250 (289)
+. .++ .||+.-- ..+.+++||+...
T Consensus 250 ~~-~~~-~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 250 VS-LAG-SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp EE-ETT-EEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred EE-ECC-EEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 32 234 4777622 1256788887654
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.07 E-value=54 Score=30.60 Aligned_cols=151 Identities=9% Similarity=-0.000 Sum_probs=78.1
Q ss_pred CCCEEE-Eec------CCeEEEEe-cCCceEEeeeec-Cc-CccCeEEcCCCcEEEEeCC---CceEEEe-CCC-eEEEE
Q 022967 87 NGVLYT-ATR------DGWIKRLH-KNGTWENWKLIG-GD-TLLGITTTQENEILVCDAD---KGLLKVT-EEG-VTVLA 151 (289)
Q Consensus 87 ~g~l~v-~~~------~g~i~~~~-~~g~~~~~~~~~-~~-p~~gl~~d~~g~l~v~~~~---~~i~~~~-~~g-~~~~~ 151 (289)
+|.||+ +-. -+.+++++ .+.+++...... .+ -+ +.+.-.+|.|||.... ..++++| .+. .+.+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 678884 321 13578888 344555543211 11 12 3444237889997422 1588998 555 55543
Q ss_pred ec--cCCccccCccceEEcCC-CcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCe------EEEeeCC---CCC
Q 022967 152 SH--VNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE------TSILLDS---LFF 219 (289)
Q Consensus 152 ~~--~~~~~~~~~~~l~~~~d-G~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~---~~~ 219 (289)
.. .+... .....++++.+ +.||+..+...-+ ......+++||+++++ ++.+... .+.
T Consensus 530 ~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~ 598 (695)
T 2zwa_A 530 PKDEFFQNS-LVSAGLEFDPVSKQGIILGGGFMDQ----------TTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY 598 (695)
T ss_dssp CSSGGGGSC-CBSCEEEEETTTTEEEEECCBCTTS----------SCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB
T ss_pred CCCCCCCcc-cceeEEEEeCCCCEEEEECCcCCCC----------CeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc
Confidence 21 11111 12223555655 8899975431000 0123579999998877 5555331 112
Q ss_pred cceEEEecCCCEEEEEeC--------CCCeEEEEEecCC
Q 022967 220 ANGVALSKDEDYLVVCET--------FKFRCLKYWLKGE 250 (289)
Q Consensus 220 p~gl~~~~d~~~l~v~~~--------~~~~i~~~~~~~~ 250 (289)
-.+++...++ .||+.-. ..+.+++||+...
T Consensus 599 ~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 599 GSQIKYITPR-KLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp SCEEEEEETT-EEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred cceEEEeCCC-EEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 2233333224 4777632 1356899998754
No 344
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=71.53 E-value=38 Score=27.27 Aligned_cols=145 Identities=10% Similarity=0.068 Sum_probs=75.9
Q ss_pred CCCEEEEe-c-----CCeEEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEeC------CCceEEEe-CCC-eEEE
Q 022967 87 NGVLYTAT-R-----DGWIKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCDA------DKGLLKVT-EEG-VTVL 150 (289)
Q Consensus 87 ~g~l~v~~-~-----~g~i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~------~~~i~~~~-~~g-~~~~ 150 (289)
++.||+-. . ...+++++ .+.+++...... .+...+++. -++.||+... .+.++++| .++ .+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 190 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV 190 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeC
Confidence 67888532 1 24688888 455666554322 111103333 3678998732 14588898 555 5555
Q ss_pred EeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEEEecC
Q 022967 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVALSKD 228 (289)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~~~~d 228 (289)
.. .+... .-..++ .-++.||+.-+... ......+++||+++++.+.+.... +.-.+++.. +
T Consensus 191 ~~-~p~~r--~~~~~~-~~~~~i~v~GG~~~------------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 253 (301)
T 2vpj_A 191 TP-MATKR--SGAGVA-LLNDHIYVVGGFDG------------TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-R 253 (301)
T ss_dssp CC-CSSCC--BSCEEE-EETTEEEEECCBCS------------SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T
T ss_pred CC-CCccc--ccceEE-EECCEEEEEeCCCC------------CcccceEEEEeCCCCcEEECCCCCCcccceeEEEE-C
Confidence 32 11111 111222 23678998754210 011356999999988887764311 111222322 4
Q ss_pred CCEEEEEeCCC-----CeEEEEEecCC
Q 022967 229 EDYLVVCETFK-----FRCLKYWLKGE 250 (289)
Q Consensus 229 ~~~l~v~~~~~-----~~i~~~~~~~~ 250 (289)
+ .+|+..... +.+++||+...
T Consensus 254 ~-~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 254 G-RLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp T-EEEEECCBCSSSBEEEEEEEETTTT
T ss_pred C-EEEEEcCcCCCcccccEEEEcCCCC
Confidence 4 477763221 46788887654
No 345
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=71.31 E-value=25 Score=32.95 Aligned_cols=96 Identities=10% Similarity=0.161 Sum_probs=44.1
Q ss_pred CcEEEEeCCCceEEEeCCC--eEEEEeccCCccccCccceEEcC-CC-cEEEeeCCCccCccccccccceecCCCEEEEE
Q 022967 128 NEILVCDADKGLLKVTEEG--VTVLASHVNGSRINLADDLIAAT-DG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (289)
Q Consensus 128 g~l~v~~~~~~i~~~~~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG-~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 203 (289)
..+|+.....++++-++.| .+.+..............|+++| |. ++|++.... + ....+.||+=
T Consensus 56 ~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~--~----------~~~~g~v~rS 123 (685)
T 3f6k_A 56 PLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVS--G----------GSRGGRIFRS 123 (685)
T ss_dssp CC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCC--T----------TCSSCEEEEE
T ss_pred CceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEecc--C----------CCCCceEEEE
Confidence 3344433335677777555 65554322222222346899998 33 688875320 0 0123567766
Q ss_pred eCCCCeEEEeeCCCCCcceEEEecC-CCEEEEE
Q 022967 204 DPSLNETSILLDSLFFANGVALSKD-EDYLVVC 235 (289)
Q Consensus 204 ~~~~~~~~~~~~~~~~p~gl~~~~d-~~~l~v~ 235 (289)
+-.+..++.+.........|+++|. .+.||+.
T Consensus 124 ~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~ 156 (685)
T 3f6k_A 124 SDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLAL 156 (685)
T ss_dssp SSTTSSCEEEECSSCBSSCCEEETTEEEEEEEE
T ss_pred CCCCceeEeccCCCCCceEEEEecCCCCEEEEE
Confidence 4333445544322111124666663 2344444
No 346
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=68.98 E-value=44 Score=26.94 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=74.7
Q ss_pred CCCEE-EEecC-----CeEEEEe-cCCceEEeeeecC-c-CccCeEEcCCCcEEEEeC--------CCceEEEe-CCC-e
Q 022967 87 NGVLY-TATRD-----GWIKRLH-KNGTWENWKLIGG-D-TLLGITTTQENEILVCDA--------DKGLLKVT-EEG-V 147 (289)
Q Consensus 87 ~g~l~-v~~~~-----g~i~~~~-~~g~~~~~~~~~~-~-p~~gl~~d~~g~l~v~~~--------~~~i~~~~-~~g-~ 147 (289)
++.|| ++-.+ ..+++++ .+.+++....... + .+ +++. -++.||+... ...++++| .++ .
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 67888 44322 2467777 3455555432211 1 12 3333 3678998731 13488888 555 5
Q ss_pred EEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEEE
Q 022967 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVAL 225 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~~ 225 (289)
+.+.. .+... ....+++ -++.||+.-+.. .......+++||+++++.+.+.... +.-.+++.
T Consensus 186 ~~~~~-~p~~r--~~~~~~~-~~~~iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 249 (302)
T 2xn4_A 186 TYIAE-MSTRR--SGAGVGV-LNNLLYAVGGHD------------GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA 249 (302)
T ss_dssp EEECC-CSSCC--BSCEEEE-ETTEEEEECCBS------------SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred EECCC-Ccccc--ccccEEE-ECCEEEEECCCC------------CCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE
Confidence 55432 12111 1122332 367899875421 0011346999999988887764321 11122333
Q ss_pred ecCCCEEEEEeCC-----CCeEEEEEecCC
Q 022967 226 SKDEDYLVVCETF-----KFRCLKYWLKGE 250 (289)
Q Consensus 226 ~~d~~~l~v~~~~-----~~~i~~~~~~~~ 250 (289)
. ++ .+|+.-.. .+.+++||+...
T Consensus 250 ~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 250 V-NG-LLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp E-TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred E-CC-EEEEECCcCCCcccccEEEEcCCCC
Confidence 2 34 47776321 245888987654
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.46 E-value=69 Score=29.44 Aligned_cols=66 Identities=9% Similarity=0.022 Sum_probs=40.5
Q ss_pred CCCcceEEEecCCCEEEEEeCCCCeEEEEEecC-------CCCcceeeeeccC--C---CCCCceeeCCCCCEEEEEeC
Q 022967 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG-------ESKEQTEIFVENL--P---GGPDNIKLAPDGSFWIAILQ 283 (289)
Q Consensus 217 ~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~--~---~~p~~i~~d~~G~lwv~~~~ 283 (289)
.-.|--.+|+++| ..|.+-.-..+|.+|+++. ++....-..++-. + ..+.+=+.+.+|.+.++.+.
T Consensus 377 GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 377 GLGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp CSCEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred CCcccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 3457778999998 5999988889999999853 2211111111100 0 11233456888998888753
No 348
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=67.44 E-value=9.8 Score=32.39 Aligned_cols=60 Identities=12% Similarity=-0.006 Sum_probs=32.0
Q ss_pred CCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCcceEEEecCCCEEEEEeCCCCeEEEEEec
Q 022967 169 TDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (289)
Q Consensus 169 ~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p~gl~~~~d~~~l~v~~~~~~~i~~~~~~ 248 (289)
.++.+|++.. .+.|+.+|.++|+..-.... .......+..+++ +|++.+..+.|+.+|..
T Consensus 8 ~~~~v~~gs~------------------dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 8 PETLLFVSTL------------------DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp CTTEEEEEET------------------TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred eCCEEEEEcC------------------CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 3667888764 36799999887765432222 1122222334554 66665667788888874
No 349
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=62.30 E-value=61 Score=26.23 Aligned_cols=144 Identities=13% Similarity=0.199 Sum_probs=75.5
Q ss_pred CCCEEEE-ec---------CCeEEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEeC------CCceEEEe-CCC-
Q 022967 87 NGVLYTA-TR---------DGWIKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCDA------DKGLLKVT-EEG- 146 (289)
Q Consensus 87 ~g~l~v~-~~---------~g~i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~------~~~i~~~~-~~g- 146 (289)
++.||+- -. ...+++++ .+.+++...... .+...+++. -++.||+... ...++++| .+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 6788843 22 13578888 345555543221 111103333 3678998732 13588888 555
Q ss_pred eEEEEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCc---ceE
Q 022967 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGV 223 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p---~gl 223 (289)
.+.+.. .+.. ......++. ++.||+.-+... ......+++||+++.+.+.+.. ...+ ..+
T Consensus 149 W~~~~~-~p~~--r~~~~~~~~-~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~ 211 (308)
T 1zgk_A 149 WHLVAP-MLTR--RIGVGVAVL-NRLLYAVGGFDG------------TNRLNSAECYYPERNEWRMITA-MNTIRSGAGV 211 (308)
T ss_dssp EEECCC-CSSC--CBSCEEEEE-TTEEEEECCBCS------------SCBCCCEEEEETTTTEEEECCC-CSSCCBSCEE
T ss_pred EeECCC-CCcc--ccceEEEEE-CCEEEEEeCCCC------------CCcCceEEEEeCCCCeEeeCCC-CCCccccceE
Confidence 554432 1111 111223332 778998744210 0113569999999888877642 1111 223
Q ss_pred EEecCCCEEEEEeCC-----CCeEEEEEecCC
Q 022967 224 ALSKDEDYLVVCETF-----KFRCLKYWLKGE 250 (289)
Q Consensus 224 ~~~~d~~~l~v~~~~-----~~~i~~~~~~~~ 250 (289)
+.. ++.||+.... .+.+++||+...
T Consensus 212 ~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 212 CVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 332 3458887422 367899997654
No 350
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=61.93 E-value=63 Score=26.26 Aligned_cols=134 Identities=16% Similarity=0.230 Sum_probs=68.3
Q ss_pred EEEEe-cCCceEEeeeec-CcCccCeEEcCCCcEEEEeCC--------CceEEEe-CCC-eEEEEeccCCccccCccceE
Q 022967 99 IKRLH-KNGTWENWKLIG-GDTLLGITTTQENEILVCDAD--------KGLLKVT-EEG-VTVLASHVNGSRINLADDLI 166 (289)
Q Consensus 99 i~~~~-~~g~~~~~~~~~-~~p~~gl~~d~~g~l~v~~~~--------~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~l~ 166 (289)
+++++ .++++....... .+...+++.. ++.||+.... +.++++| .+. .+.+.. .+... .-..++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r--~~~~~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPIKV--YGHNVI 155 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSSCE--ESCEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCCcc--cccEEE
Confidence 77888 455665543221 1111134433 6789886321 2378888 555 555432 12111 112333
Q ss_pred EcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCC--CCCcceEEEecCCCEEEEEeCC-----C
Q 022967 167 AATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLVVCETF-----K 239 (289)
Q Consensus 167 ~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~--~~~p~gl~~~~d~~~l~v~~~~-----~ 239 (289)
+ -++.||+.-+... .......+++||+++++.+.+..- .+...+++.. ++ .||+..-. .
T Consensus 156 ~-~~~~iyv~GG~~~-----------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~ 221 (318)
T 2woz_A 156 S-HNGMIYCLGGKTD-----------DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KG-KIVIAGGVTEDGLS 221 (318)
T ss_dssp E-ETTEEEEECCEES-----------SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEEEEEETTEEE
T ss_pred E-ECCEEEEEcCCCC-----------CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CC-EEEEEcCcCCCCcc
Confidence 3 5788998643200 011235699999998888776421 1111233332 34 47776321 2
Q ss_pred CeEEEEEecCC
Q 022967 240 FRCLKYWLKGE 250 (289)
Q Consensus 240 ~~i~~~~~~~~ 250 (289)
+.+++||+...
T Consensus 222 ~~~~~yd~~~~ 232 (318)
T 2woz_A 222 ASVEAFDLKTN 232 (318)
T ss_dssp EEEEEEETTTC
T ss_pred ceEEEEECCCC
Confidence 45778887654
No 351
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=56.36 E-value=1.3e+02 Score=28.14 Aligned_cols=59 Identities=7% Similarity=0.168 Sum_probs=31.1
Q ss_pred EEEecCCeEEEEecCC-ceEEeeeecCc-----CccCeEEcCC--CcEEEEeC------CCceEEEeCCC--eEEE
Q 022967 91 YTATRDGWIKRLHKNG-TWENWKLIGGD-----TLLGITTTQE--NEILVCDA------DKGLLKVTEEG--VTVL 150 (289)
Q Consensus 91 ~v~~~~g~i~~~~~~g-~~~~~~~~~~~-----p~~gl~~d~~--g~l~v~~~------~~~i~~~~~~g--~~~~ 150 (289)
|+....++|++-+..| .++.+...... .. .|++++. +++|++.. ..+|++-.+.| ++.+
T Consensus 59 ~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~-~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~ 133 (685)
T 3f6k_A 59 IMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEF-GMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQT 133 (685)
T ss_dssp ----CEEEEEEESSTTSSCEECGGGGTTCCBCGGG-CEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEE
T ss_pred EEeecCCeEEEEeCCCCCceECcCCCCCCccccee-EEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEec
Confidence 3333345677665434 45554332221 24 7888863 36888764 35577776656 5554
No 352
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=53.64 E-value=85 Score=25.15 Aligned_cols=146 Identities=11% Similarity=0.091 Sum_probs=75.5
Q ss_pred CCCEEEE-ec-----CCeEEEEe-cCCceEEeeeecC-c-CccCeEEcCCCcEEEEeCC------CceEEEe-CCC-eEE
Q 022967 87 NGVLYTA-TR-----DGWIKRLH-KNGTWENWKLIGG-D-TLLGITTTQENEILVCDAD------KGLLKVT-EEG-VTV 149 (289)
Q Consensus 87 ~g~l~v~-~~-----~g~i~~~~-~~g~~~~~~~~~~-~-p~~gl~~d~~g~l~v~~~~------~~i~~~~-~~g-~~~ 149 (289)
++.||+- -. ...+++++ .+.+++....... + .+ +++. -++.||+.... +.++++| .+. .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 6788853 21 24588888 4556665543221 1 12 3433 36788886321 2377888 555 555
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCC--CCcceEEEec
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVALSK 227 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--~~p~gl~~~~ 227 (289)
+.. .+.. .....+++ -++.||+.-+.... .......+++||+++++.+.+..-. +.-..++..
T Consensus 139 ~~~-~p~~--r~~~~~~~-~~~~iyv~GG~~~~----------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 203 (302)
T 2xn4_A 139 VAP-MNTR--RSSVGVGV-VGGLLYAVGGYDVA----------SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL- 203 (302)
T ss_dssp ECC-CSSC--CBSCEEEE-ETTEEEEECCEETT----------TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred cCC-CCCc--ccCceEEE-ECCEEEEEeCCCCC----------CCccccEEEEEeCCCCcEEECCCCccccccccEEEE-
Confidence 432 1211 11122222 37789987432100 0011346899999988887764211 111222322
Q ss_pred CCCEEEEEeCC-----CCeEEEEEecCC
Q 022967 228 DEDYLVVCETF-----KFRCLKYWLKGE 250 (289)
Q Consensus 228 d~~~l~v~~~~-----~~~i~~~~~~~~ 250 (289)
+ +.||+.-.. .+.+++||+...
T Consensus 204 ~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 204 N-NLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp T-TEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred C-CEEEEECCCCCCcccceEEEEeCCCC
Confidence 3 458887421 357899997654
No 353
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=52.55 E-value=91 Score=25.17 Aligned_cols=143 Identities=10% Similarity=0.134 Sum_probs=74.6
Q ss_pred CCCEEEE-e-----cCCeEEEEe-cCCceEEeeeecC-c-CccCeEEcCCCcEEEEeC------CCceEEEe-CCC-eEE
Q 022967 87 NGVLYTA-T-----RDGWIKRLH-KNGTWENWKLIGG-D-TLLGITTTQENEILVCDA------DKGLLKVT-EEG-VTV 149 (289)
Q Consensus 87 ~g~l~v~-~-----~~g~i~~~~-~~g~~~~~~~~~~-~-p~~gl~~d~~g~l~v~~~------~~~i~~~~-~~g-~~~ 149 (289)
++.||+- - ....+++++ .+.+++....... + .. ..+.. ++.||+... .+.++++| .+. .+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 6788853 2 124578888 3455555432211 1 12 33332 678998732 13488888 555 554
Q ss_pred EEeccCCccccCccceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCc---ceEEEe
Q 022967 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALS 226 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p---~gl~~~ 226 (289)
+.. .+.. .....+++. ++.||+..+... ......+++||+++++.+.+.. +..+ .+++..
T Consensus 199 ~~~-~p~~--r~~~~~~~~-~~~iyv~GG~~~------------~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~ 261 (308)
T 1zgk_A 199 ITA-MNTI--RSGAGVCVL-HNCIYAAGGYDG------------QDQLNSVERYDVETETWTFVAP-MKHRRSALGITVH 261 (308)
T ss_dssp CCC-CSSC--CBSCEEEEE-TTEEEEECCBCS------------SSBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE
T ss_pred CCC-CCCc--cccceEEEE-CCEEEEEeCCCC------------CCccceEEEEeCCCCcEEECCC-CCCCccceEEEEE
Confidence 422 1111 111233333 778998754210 0113569999999888877642 2222 233332
Q ss_pred cCCCEEEEEeC-----CCCeEEEEEecCC
Q 022967 227 KDEDYLVVCET-----FKFRCLKYWLKGE 250 (289)
Q Consensus 227 ~d~~~l~v~~~-----~~~~i~~~~~~~~ 250 (289)
++ .||+.-- ....+++||+...
T Consensus 262 -~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 262 -QG-RIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp -TT-EEEEECCBCSSCBCCEEEEEETTTT
T ss_pred -CC-EEEEEcCcCCCcccceEEEEcCCCC
Confidence 34 4777632 1356888887654
No 354
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=51.99 E-value=31 Score=29.18 Aligned_cols=23 Identities=22% Similarity=0.462 Sum_probs=16.6
Q ss_pred CCcEEEEeCCCceEEEe-CCC-eEE
Q 022967 127 ENEILVCDADKGLLKVT-EEG-VTV 149 (289)
Q Consensus 127 ~g~l~v~~~~~~i~~~~-~~g-~~~ 149 (289)
+|.+||++....|+.+| .+| ...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W 34 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIW 34 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEE
Confidence 45688888767788888 677 444
No 355
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=45.66 E-value=1.1e+02 Score=25.20 Aligned_cols=69 Identities=19% Similarity=0.082 Sum_probs=38.2
Q ss_pred ceEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCC--CeEEEeeCCC---CCcceEEEecCCCEEEEEeCC
Q 022967 164 DLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL--NETSILLDSL---FFANGVALSKDEDYLVVCETF 238 (289)
Q Consensus 164 ~l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~--~~~~~~~~~~---~~p~gl~~~~d~~~l~v~~~~ 238 (289)
..++.-++.||+.-+. ....+++||++. .+.+.+..-. +.-..++.. + +.||+.--.
T Consensus 13 ~~~~~~~~~iyv~GG~----------------~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~-~~lyv~GG~ 74 (357)
T 2uvk_A 13 GTGAIDNDTVYIGLGS----------------AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-D-GNLYVFGGI 74 (357)
T ss_dssp CEEEEETTEEEEECGG----------------GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-T-TEEEEECCE
T ss_pred eEEEEECCEEEEEeCc----------------CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-C-CEEEEEcCC
Confidence 3333347889987432 123699999973 6676664311 111223332 3 458886321
Q ss_pred ----------CCeEEEEEecCC
Q 022967 239 ----------KFRCLKYWLKGE 250 (289)
Q Consensus 239 ----------~~~i~~~~~~~~ 250 (289)
.+.+++||+...
T Consensus 75 ~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 75 GKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp EECTTSCEEECCCEEEEETTTT
T ss_pred CCCCCccceeeccEEEEeCCCC
Confidence 246888987654
No 356
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=27.37 E-value=3.6e+02 Score=24.58 Aligned_cols=53 Identities=17% Similarity=0.124 Sum_probs=35.0
Q ss_pred CCEEEEEeCCCCeEEEee--C-CCCCcceE----EEecCC----CEEEEEeCCCCeEEEEEecCC
Q 022967 197 HGKLLKYDPSLNETSILL--D-SLFFANGV----ALSKDE----DYLVVCETFKFRCLKYWLKGE 250 (289)
Q Consensus 197 ~g~i~~~~~~~~~~~~~~--~-~~~~p~gl----~~~~d~----~~l~v~~~~~~~i~~~~~~~~ 250 (289)
...||.+|.++|....-. . ....++|+ .++.|+ +.+|+.|.. ..|||||+.+.
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-GnlWRfDl~~~ 285 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQ-GNLWRFDLIAG 285 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETT-SEEEEEECSCS
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCC-CcEEEEEcCCC
Confidence 457999999988754321 1 12234554 244443 479999986 88999999764
No 357
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=24.68 E-value=2.7e+02 Score=22.26 Aligned_cols=132 Identities=14% Similarity=0.140 Sum_probs=68.1
Q ss_pred EEEEe-cCCceEEeeeecC-c-CccCeEEcCCCcEEEEeC------C---CceEEEe-CCC-eEEEEeccCCccccCccc
Q 022967 99 IKRLH-KNGTWENWKLIGG-D-TLLGITTTQENEILVCDA------D---KGLLKVT-EEG-VTVLASHVNGSRINLADD 164 (289)
Q Consensus 99 i~~~~-~~g~~~~~~~~~~-~-p~~gl~~d~~g~l~v~~~------~---~~i~~~~-~~g-~~~~~~~~~~~~~~~~~~ 164 (289)
+++++ .+++++....... + -+ +++.. ++.||+... . +.++++| .++ .+.+.. .+.. +.-..
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~--r~~~~ 143 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPYV--VYGHT 143 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSSC--CBSCE
T ss_pred eEEecCCCCeEEECCCCCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCCc--cccee
Confidence 77788 4555655432211 1 12 33333 678888742 1 3488888 555 554432 1211 11122
Q ss_pred eEEcCCCcEEEeeCCCccCccccccccceecCCCEEEEEeCCCCeEEEeeCCCCCc---ceEEEecCCCEEEEEeCC---
Q 022967 165 LIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSKDEDYLVVCETF--- 238 (289)
Q Consensus 165 l~~~~dG~lyv~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~p---~gl~~~~d~~~l~v~~~~--- 238 (289)
++.-++.||+.-+... .......+++||+.+.+.+.+.. ...| ...+.. ++ .||+..-.
T Consensus 144 -~~~~~~~iyv~GG~~~-----------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~ 208 (315)
T 4asc_A 144 -VLSHMDLVYVIGGKGS-----------DRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATVH-DG-RIIVAAGVTDT 208 (315)
T ss_dssp -EEEETTEEEEECCBCT-----------TSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TT-EEEEEEEECSS
T ss_pred -EEEECCEEEEEeCCCC-----------CCcccceEEEEeCCCCeEEECCC-CCCchhceEEEEE-CC-EEEEEeccCCC
Confidence 2335778998754210 11123579999999888877643 2112 222322 44 47776321
Q ss_pred --CCeEEEEEecCC
Q 022967 239 --KFRCLKYWLKGE 250 (289)
Q Consensus 239 --~~~i~~~~~~~~ 250 (289)
.+.+++||+...
T Consensus 209 ~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 209 GLTSSAEVYSITDN 222 (315)
T ss_dssp SEEEEEEEEETTTT
T ss_pred CccceEEEEECCCC
Confidence 136888887654
No 358
>1wlp_A Cytochrome B-245 light chain; SH3 domain, polyproline, oxidoreductase/signaling protein complex; NMR {Homo sapiens}
Probab=23.24 E-value=32 Score=16.85 Aligned_cols=8 Identities=75% Similarity=1.522 Sum_probs=5.2
Q ss_pred CCCCCCCC
Q 022967 3 PSSNPPPT 10 (289)
Q Consensus 3 ~~~~~~~~ 10 (289)
|+++|||-
T Consensus 8 pP~nPPPR 15 (26)
T 1wlp_A 8 PPSNPPPR 15 (26)
T ss_dssp CCSSCCCC
T ss_pred CCCCcCCC
Confidence 66777763
No 359
>1ymm_C MBP peptide, HLA class II histocompatibility antigen, DR beta; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens}
Probab=20.84 E-value=53 Score=16.00 Aligned_cols=12 Identities=25% Similarity=0.387 Sum_probs=8.1
Q ss_pred CCCCCCCCCCCC
Q 022967 1 MTPSSNPPPTTG 12 (289)
Q Consensus 1 ~~~~~~~~~~~~ 12 (289)
|+|...|++|..
T Consensus 12 vspr~pp~~q~~ 23 (26)
T 1ymm_C 12 VTPRGGSGGGGG 23 (26)
T ss_pred cCCCCCCCCcCC
Confidence 567777777654
No 360
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=20.75 E-value=1.9e+02 Score=24.62 Aligned_cols=61 Identities=10% Similarity=0.015 Sum_probs=37.2
Q ss_pred ecCCCEEEEEeCCCC--eEEEEEecCCCCcceeeeeccCC---CCCC-ceeeCCCCCEEEEEeC-ccc
Q 022967 226 SKDEDYLVVCETFKF--RCLKYWLKGESKEQTEIFVENLP---GGPD-NIKLAPDGSFWIAILQ-VFI 286 (289)
Q Consensus 226 ~~d~~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~---~~p~-~i~~d~~G~lwv~~~~-g~i 286 (289)
+.+.++||.-+...+ .|.+||++..++...-.+....| +.+. ++.+-.+..||+.+.. .++
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i 103 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRL 103 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEE
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceE
Confidence 344567888887777 99999998765443323322222 2232 3545567799998754 344
Done!