BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022974
MNGTTTQESNPSHHQTSLSSTNQEMQSHQAAGPSSSSGPASTASAEKWGTHVMGTPAAPT
CHPDNKKAALWGAGAAGDNRAQYNNHHHPYLQYSPVERPSGSPMESILNVFNSWSNKAET
LANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLS
TSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENS
SEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISNFVATGIAVQPNGA

High Scoring Gene Products

Symbol, full name Information P value
AT5G13200 protein from Arabidopsis thaliana 5.2e-81
GEM
AT2G22475
protein from Arabidopsis thaliana 4.5e-43
FIP1
AT1G28200
protein from Arabidopsis thaliana 1.2e-42
AT5G23370 protein from Arabidopsis thaliana 7.9e-30
AT5G23360 protein from Arabidopsis thaliana 4.4e-29
AT5G08350 protein from Arabidopsis thaliana 9.1e-29
AT4G01600 protein from Arabidopsis thaliana 3.5e-27

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022974
        (289 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2183901 - symbol:AT5G13200 "AT5G13200" species...   813  5.2e-81   1
TAIR|locus:505006267 - symbol:GEM "AT2G22475" species:370...   455  4.5e-43   1
TAIR|locus:2032185 - symbol:FIP1 "AT1G28200" species:3702...   451  1.2e-42   1
TAIR|locus:2166806 - symbol:AT5G23370 "AT5G23370" species...   330  7.9e-30   1
TAIR|locus:2166791 - symbol:AT5G23360 "AT5G23360" species...   323  4.4e-29   1
TAIR|locus:2150823 - symbol:AT5G08350 "AT5G08350" species...   320  9.1e-29   1
TAIR|locus:2133387 - symbol:AT4G01600 "AT4G01600" species...   305  3.5e-27   1


>TAIR|locus:2183901 [details] [associations]
            symbol:AT5G13200 "AT5G13200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0010286 "heat acclimation" evidence=RCA]
            Pfam:PF02893 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL391711
            EMBL:AL163491 InterPro:IPR004182 SMART:SM00568 HOGENOM:HOG000239286
            EMBL:BT010714 EMBL:BT012428 EMBL:AK229276 IPI:IPI00528201
            PIR:T48567 RefSeq:NP_196824.1 UniGene:At.25214 STRING:Q9LYV6
            PaxDb:Q9LYV6 PRIDE:Q9LYV6 DNASU:831159 EnsemblPlants:AT5G13200.1
            GeneID:831159 KEGG:ath:AT5G13200 TAIR:At5g13200 eggNOG:NOG289836
            InParanoid:Q9LYV6 OMA:PPEKYIQ PhylomeDB:Q9LYV6
            ProtClustDB:CLSN2686867 Genevestigator:Q9LYV6 Uniprot:Q9LYV6
        Length = 272

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 143/233 (61%), Positives = 183/233 (78%)

Query:    46 EKWGTHVMGTPAAPTCHPDNKKXXXXXXXXXXDNRAQYNNHHHPYLQYSPVERPS-GSPM 104
             +KWGTHVMG PAAP  HPDN++          DN+      + PY+ YSPVE P+  +P+
Sbjct:    37 KKWGTHVMGAPAAPVAHPDNQQAAAWVAG---DNQ---QTQYQPYVIYSPVEHPTTNNPL 90

Query:   105 ESILNVFNSWSNKAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFA 164
             E ++ +F++WS KAET+A N+WHNLKT  S+SE AWGK+NLTAKAI  GGFE++++Q F 
Sbjct:    91 EPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFG 150

Query:   165 THQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLP 224
             T  NETLKKTFACYLST+TGPVAGT+YLSN  VAFCSDRPL FTAPSGQ++WSYY+V++P
Sbjct:   151 TEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVP 210

Query:   225 LAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISNF 277
             LA +  +NPV+++E   EKYIQ+ T+DGH+FWFMGFVNY+KAT HL  S+S+F
Sbjct:   211 LANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDF 263


>TAIR|locus:505006267 [details] [associations]
            symbol:GEM "AT2G22475" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010026 "trichome differentiation"
            evidence=IMP] [GO:0010482 "regulation of epidermal cell division"
            evidence=IMP] [GO:0048765 "root hair cell differentiation"
            evidence=IMP] [GO:0051567 "histone H3-K9 methylation" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0042732 "D-xylose metabolic
            process" evidence=RCA] Pfam:PF02893 GO:GO:0005829 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0051567 EMBL:AC006592 GO:GO:0048765
            InterPro:IPR004182 SMART:SM00568 GO:GO:0010482 GO:GO:0010026
            HOGENOM:HOG000239286 EMBL:EF490993 EMBL:AK118552 EMBL:AY087182
            IPI:IPI00525431 IPI:IPI00531015 RefSeq:NP_565538.1
            RefSeq:NP_973510.1 UniGene:At.19761 PaxDb:Q8S8F8 PRIDE:Q8S8F8
            EnsemblPlants:AT2G22475.1 GeneID:816780 KEGG:ath:AT2G22475
            TAIR:At2g22475 eggNOG:NOG242316 InParanoid:Q8S8F8 OMA:KPYACYL
            PhylomeDB:Q8S8F8 ProtClustDB:CLSN2688346 Genevestigator:Q8S8F8
            Uniprot:Q8S8F8
        Length = 299

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 89/198 (44%), Positives = 125/198 (63%)

Query:    88 HPYLQYSPVERPSGS---PMESILNVFNSW-------SNKAETLANNIWHNLKTNSSVSE 137
             +PY+  SP E    S    ME++  V   W       + K E+LA N W +L+T  S ++
Sbjct:    96 NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFAD 155

Query:   138 AAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHV 197
             AA G++  + K    GG+E I++QTF T   E L  +FACYLSTS GPV G LY+S+  +
Sbjct:   156 AAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKL 215

Query:   198 AFCSDRPLSFTAPSGQKT-WSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFW 256
             A+CSD PLS+   +G +T WSYYKV++PL  + A+NP     N +EKYIQ++++D HEFW
Sbjct:   216 AYCSDNPLSYK--NGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFW 273

Query:   257 FMGFVNYDKATRHLSESI 274
             FMGF+NYD A   L +S+
Sbjct:   274 FMGFLNYDGAVTSLQDSL 291


>TAIR|locus:2032185 [details] [associations]
            symbol:FIP1 "AT1G28200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0006623 "protein targeting to vacuole"
            evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
            [GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0016197
            "endosomal transport" evidence=RCA] Pfam:PF02893 EMBL:CP002684
            GenomeReviews:CT485782_GR InterPro:IPR004182 SMART:SM00568
            EMBL:AC021044 EMBL:AF174428 EMBL:AF370177 EMBL:AY056389
            EMBL:AY059137 EMBL:AY086994 IPI:IPI00542127 PIR:A86408
            RefSeq:NP_174141.1 UniGene:At.21796 STRING:Q9SE96 PaxDb:Q9SE96
            PRIDE:Q9SE96 EnsemblPlants:AT1G28200.1 GeneID:839714
            KEGG:ath:AT1G28200 TAIR:At1g28200 eggNOG:NOG276129
            HOGENOM:HOG000239286 InParanoid:Q9SE96 OMA:TTMPAES PhylomeDB:Q9SE96
            ProtClustDB:CLSN2914667 Genevestigator:Q9SE96 Uniprot:Q9SE96
        Length = 259

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 90/197 (45%), Positives = 126/197 (63%)

Query:    88 HPYLQYSPVERPSGSPMESILNVFNSW-------SNKAETLANNIWHNLKTNSSVSEAAW 140
             +PY+  SP  R   + M+S+ +    W       + KAE LA N W +LKT  SV++AA 
Sbjct:    65 NPYVSPSPAPR---NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAV 121

Query:   141 GKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFC 200
              ++    K +  GG+E ++KQTF    +E L KT+ACYLSTS GPV G +YLS   +AF 
Sbjct:   122 SRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFS 181

Query:   201 SDRPLSFTAPSGQKT-WSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMG 259
             SD PLS+    G++T WSYYKV+LP   + A+NP   R N+S+KYIQ+++ID HEFWFMG
Sbjct:   182 SDNPLSYK--EGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMG 239

Query:   260 FVNYDKATRHLSESISN 276
             FV Y+ A + L E++ +
Sbjct:   240 FVTYESAVKSLQEAVQS 256


>TAIR|locus:2166806 [details] [associations]
            symbol:AT5G23370 "AT5G23370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] Pfam:PF02893 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR004182 SMART:SM00568 EMBL:AB007648 HOGENOM:HOG000239286
            ProtClustDB:CLSN2686137 IPI:IPI00523352 RefSeq:NP_197728.1
            UniGene:At.65542 EnsemblPlants:AT5G23370.1 GeneID:832401
            KEGG:ath:AT5G23370 TAIR:At5g23370 eggNOG:NOG264012
            InParanoid:Q9FMW4 OMA:QRCCKYM PhylomeDB:Q9FMW4
            Genevestigator:Q9FMW4 Uniprot:Q9FMW4
        Length = 219

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 60/159 (37%), Positives = 96/159 (60%)

Query:   117 KAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFA 176
             K ++  N +    K    ++E    K++L A+ ++ GG E IYK+ F     E L K + 
Sbjct:    56 KNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQ 115

Query:   177 CYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIM 236
             CYLST+ GP+AG L++S+  +AFCS+R +   +P G+    +YKV +PL  I  +N    
Sbjct:   116 CYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQN 175

Query:   237 RENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESIS 275
                 S+KY+++VT+DG +FWFMGF++Y KA   L +++S
Sbjct:   176 TTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214


>TAIR|locus:2166791 [details] [associations]
            symbol:AT5G23360 "AT5G23360" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] Pfam:PF02893 EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR004182 SMART:SM00568
            EMBL:AB007648 HOGENOM:HOG000239286 ProtClustDB:CLSN2686137
            EMBL:BT010826 EMBL:BT011297 IPI:IPI00519830 RefSeq:NP_197727.1
            UniGene:At.31014 EnsemblPlants:AT5G23360.1 GeneID:832400
            KEGG:ath:AT5G23360 TAIR:At5g23360 eggNOG:euNOG10112
            InParanoid:Q9FMW5 OMA:CYLSTTE PhylomeDB:Q9FMW5
            Genevestigator:Q9FMW5 Uniprot:Q9FMW5
        Length = 210

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 60/159 (37%), Positives = 96/159 (60%)

Query:   117 KAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFA 176
             K ++  N      K    ++E    K++L AK ++ GG E IYK+ F     E L K + 
Sbjct:    48 KTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQ 107

Query:   177 CYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIM 236
             CYLST+ G +AG L++S+  +AFCS+R +  T+P G  T  +YKV +PL  I  +N    
Sbjct:   108 CYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQN 167

Query:   237 RENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESIS 275
              +  S++Y+++VT+D ++FWFMGFV+Y KA   L ++++
Sbjct:   168 TKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALN 206


>TAIR|locus:2150823 [details] [associations]
            symbol:AT5G08350 "AT5G08350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF02893 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR004182 SMART:SM00568 EMBL:AL392174 HOGENOM:HOG000239286
            EMBL:AY085900 EMBL:AK118619 EMBL:BT004668 IPI:IPI00529042
            RefSeq:NP_196452.1 UniGene:At.32589 PaxDb:Q9FTA0 PRIDE:Q9FTA0
            EnsemblPlants:AT5G08350.1 GeneID:830733 KEGG:ath:AT5G08350
            TAIR:At5g08350 eggNOG:NOG235697 InParanoid:Q9FTA0 OMA:MAFCSER
            PhylomeDB:Q9FTA0 ProtClustDB:CLSN2686137 Genevestigator:Q9FTA0
            Uniprot:Q9FTA0
        Length = 222

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 59/159 (37%), Positives = 96/159 (60%)

Query:   117 KAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFA 176
             K +   N +    K    ++E    K++L A+ ++ GG E I+K+ F   + E L K + 
Sbjct:    55 KTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQ 114

Query:   177 CYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIM 236
             CYLST+ GP+AG L++S+  +AFCS+R +   +P G     +YKV +PL  I  +N    
Sbjct:   115 CYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQN 174

Query:   237 RENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESIS 275
              +  S+KY+++VT+DG +FWFMGF++Y KA   L +++S
Sbjct:   175 TKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213


>TAIR|locus:2133387 [details] [associations]
            symbol:AT4G01600 "AT4G01600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] Pfam:PF02893 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR004182 SMART:SM00568
            EMBL:AL161492 HOGENOM:HOG000239286 EMBL:BT015153 EMBL:BT015662
            IPI:IPI00544293 IPI:IPI00656790 PIR:G85020 RefSeq:NP_001031570.1
            RefSeq:NP_192070.1 UniGene:At.34402 EnsemblPlants:AT4G01600.1
            GeneID:828085 KEGG:ath:AT4G01600 TAIR:At4g01600 eggNOG:NOG248358
            OMA:YISNRRI PhylomeDB:Q9M122 ProtClustDB:CLSN2685514
            Genevestigator:Q9M122 Uniprot:Q9M122
        Length = 233

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 72/221 (32%), Positives = 114/221 (51%)

Query:    65 NKKXXXXXXXXXXDNRAQYNNHHHPYLQY-SPVERPSGSPMESILNVFNSW-------SN 116
             N K           +  +Y+N   PY+   SP         + +L V N         + 
Sbjct:     9 NDKLDSTAKHKTNSHGGRYDN---PYVHITSPTSASDKRSKDKVLEVLNRCGKKVEDATR 65

Query:   117 KAETLANNIWHNLKTNSSVSEAAWGKMNLTAKAIKGGGFETIYKQTFATHQNETLKKTFA 176
             KAE L   +  +LK + S+S+AA  +++   K I  GG E ++++ F     E L  +F 
Sbjct:    66 KAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFV 125

Query:   177 CYLSTSTGPVAGTLYLSNVHVAFCSDRPLSF-TAPSGQKTWSYYKVMLPLAMIGAINPVI 235
             CY+ST++GPV G +Y+SN  +AFCSD  +   ++  G    +YYKV++    I +I+   
Sbjct:   126 CYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSST 185

Query:   236 MRENSSEKYIQIVTIDGHEFWFMGFVNYDKATRHLSESISN 276
                  SE+Y+ +VT DG EFWFMGFV+Y  A   L++++ N
Sbjct:   186 NVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLN 226


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.126   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      289       263   0.00091  114 3  11 23  0.38    34
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  222 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.86u 0.08s 19.94t   Elapsed:  00:00:01
  Total cpu time:  19.86u 0.08s 19.94t   Elapsed:  00:00:01
  Start:  Sat May 11 05:16:32 2013   End:  Sat May 11 05:16:33 2013

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