Query 022975
Match_columns 289
No_of_seqs 157 out of 791
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:16:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 1.6E-73 5.4E-78 557.2 27.5 245 35-287 15-264 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 1.6E-69 5.5E-74 525.5 25.2 236 39-287 4-240 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 3.7E-68 1.3E-72 522.0 28.4 250 32-287 18-271 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 2.2E-65 7.5E-70 500.0 28.1 245 34-287 5-252 (451)
5 1cza_N Hexokinase type I; stru 100.0 4E-61 1.4E-65 504.1 26.9 240 39-286 468-710 (917)
6 2yhx_A Hexokinase B; transfera 100.0 1.1E-58 3.9E-63 453.0 25.1 241 37-287 5-247 (457)
7 1cza_N Hexokinase type I; stru 100.0 2.2E-54 7.7E-59 453.0 24.2 246 34-287 15-263 (917)
8 1z05_A Transcriptional regulat 99.7 3.2E-16 1.1E-20 151.0 18.9 205 44-283 59-274 (429)
9 2hoe_A N-acetylglucosamine kin 99.7 7.6E-16 2.6E-20 146.2 18.2 207 43-283 38-252 (380)
10 1z6r_A MLC protein; transcript 99.7 9.9E-16 3.4E-20 146.2 18.7 210 43-283 35-252 (406)
11 2qm1_A Glucokinase; alpha-beta 99.7 3.5E-16 1.2E-20 144.3 14.0 164 95-283 6-174 (326)
12 4db3_A Glcnac kinase, N-acetyl 99.6 4.5E-15 1.5E-19 138.3 13.2 158 96-283 25-186 (327)
13 3vgl_A Glucokinase; ROK family 99.6 1.7E-15 6E-20 140.5 10.3 154 95-283 2-162 (321)
14 2ap1_A Putative regulator prot 99.6 1E-14 3.5E-19 135.1 13.7 159 95-283 24-186 (327)
15 3vov_A Glucokinase, hexokinase 99.6 1.2E-14 4.1E-19 134.0 12.7 159 96-283 2-164 (302)
16 3mcp_A Glucokinase; structural 99.6 5.5E-15 1.9E-19 140.5 10.3 162 93-287 7-189 (366)
17 2yhw_A Bifunctional UDP-N-acet 99.6 2.6E-14 8.8E-19 133.4 14.2 165 94-283 29-197 (343)
18 4htl_A Beta-glucoside kinase; 99.6 1.1E-14 3.6E-19 133.9 10.7 155 96-283 5-163 (297)
19 3htv_A D-allose kinase, alloki 99.6 1.3E-14 4.5E-19 134.4 10.6 162 93-283 5-172 (310)
20 1woq_A Inorganic polyphosphate 99.5 5.3E-14 1.8E-18 127.1 13.5 164 90-282 7-175 (267)
21 2aa4_A Mannac kinase, putative 99.5 1.8E-14 6.2E-19 130.9 10.5 157 96-283 2-161 (289)
22 3epq_A Putative fructokinase; 99.5 2.1E-14 7.1E-19 132.7 10.3 152 96-283 4-161 (302)
23 3r8e_A Hypothetical sugar kina 99.5 2E-14 6.8E-19 133.3 9.7 164 92-283 16-183 (321)
24 2gup_A ROK family protein; sug 99.5 1.1E-13 3.8E-18 126.0 9.0 152 96-283 5-158 (292)
25 1sz2_A Glucokinase, glucose ki 99.4 7.5E-13 2.6E-17 123.2 8.8 149 94-283 13-176 (332)
26 2q2r_A Glucokinase 1, putative 99.4 6.6E-13 2.3E-17 125.5 7.1 157 94-283 28-221 (373)
27 3lm2_A Putative kinase; struct 99.3 6.1E-12 2.1E-16 112.1 8.9 139 93-283 4-145 (226)
28 2ch5_A NAGK protein; transfera 99.3 1.7E-11 5.7E-16 114.0 10.2 131 96-262 7-139 (347)
29 1saz_A Probable butyrate kinas 99.1 7.1E-11 2.4E-15 112.4 5.1 164 96-282 3-213 (381)
30 1zbs_A Hypothetical protein PG 99.0 6E-10 2E-14 101.7 10.0 140 97-282 2-143 (291)
31 1zc6_A Probable N-acetylglucos 99.0 1.1E-09 3.8E-14 100.3 11.1 141 96-282 12-156 (305)
32 1zxo_A Conserved hypothetical 99.0 1.5E-10 5.3E-15 105.6 5.0 136 97-282 2-141 (291)
33 2e2o_A Hexokinase; acetate and 99.0 1.6E-10 5.4E-15 105.4 5.0 139 96-283 3-141 (299)
34 3ifr_A Carbohydrate kinase, FG 97.6 0.00016 5.4E-09 70.9 9.7 96 93-195 5-107 (508)
35 2p3r_A Glycerol kinase; glycer 97.5 0.00035 1.2E-08 68.5 10.1 96 93-195 1-104 (510)
36 4e1j_A Glycerol kinase; struct 97.5 0.00038 1.3E-08 68.5 9.9 94 95-195 26-127 (520)
37 3h3n_X Glycerol kinase; ATP-bi 97.4 0.00077 2.6E-08 65.9 10.8 95 94-195 4-106 (506)
38 3g25_A Glycerol kinase; IDP007 97.4 0.00061 2.1E-08 66.5 10.0 94 95-195 6-107 (501)
39 2dpn_A Glycerol kinase; thermu 97.3 0.00075 2.6E-08 65.8 9.7 81 96-183 3-90 (495)
40 2w40_A Glycerol kinase, putati 97.3 0.001 3.6E-08 64.9 10.2 81 96-183 5-94 (503)
41 3ezw_A Glycerol kinase; glycer 97.2 0.00062 2.1E-08 66.9 8.2 77 92-175 1-80 (526)
42 2d4w_A Glycerol kinase; alpha 97.2 0.0012 4E-08 64.5 9.9 81 96-183 3-90 (504)
43 2itm_A Xylulose kinase, xylulo 97.2 0.0012 4.1E-08 64.1 9.7 80 96-184 1-87 (484)
44 2zf5_O Glycerol kinase; hypert 97.2 0.0012 3.9E-08 64.4 9.5 92 96-194 4-102 (497)
45 3l0q_A Xylulose kinase; xlylul 97.1 0.0014 4.9E-08 64.7 8.8 74 95-175 5-81 (554)
46 3hz6_A Xylulokinase; xylulose, 96.9 0.0024 8.1E-08 62.6 8.8 74 95-176 5-81 (511)
47 3jvp_A Ribulokinase; PSI-II, N 96.9 0.0023 8E-08 63.5 8.5 75 95-176 5-94 (572)
48 3ll3_A Gluconate kinase; xylul 96.9 0.0032 1.1E-07 61.5 9.3 62 95-159 4-68 (504)
49 2uyt_A Rhamnulokinase; rhamnos 96.3 0.014 4.8E-07 56.4 9.4 81 95-184 4-93 (489)
50 3bex_A Type III pantothenate k 96.1 0.013 4.3E-07 52.3 7.4 48 96-152 4-51 (249)
51 3h6e_A Carbohydrate kinase, FG 95.7 0.013 4.5E-07 57.1 6.3 58 95-155 6-65 (482)
52 3i8b_A Xylulose kinase; strain 95.7 0.051 1.7E-06 53.2 10.4 86 94-194 4-94 (515)
53 3djc_A Type III pantothenate k 94.9 0.064 2.2E-06 48.3 7.6 51 96-160 3-53 (266)
54 2ych_A Competence protein PILM 93.5 2.2 7.5E-05 39.0 15.2 56 206-263 151-211 (377)
55 4ehu_A Activator of 2-hydroxyi 93.3 0.15 5E-06 45.1 6.6 38 225-262 74-112 (276)
56 4bc3_A Xylulose kinase; transf 92.7 0.32 1.1E-05 47.7 8.6 32 95-129 10-41 (538)
57 3h1q_A Ethanolamine utilizatio 92.2 3.9 0.00013 35.4 14.3 49 209-262 109-158 (272)
58 2h3g_X Biosynthetic protein; p 91.4 0.34 1.2E-05 43.5 6.5 45 97-150 2-46 (268)
59 4a2a_A Cell division protein F 87.3 16 0.00053 34.5 15.0 56 206-263 168-226 (419)
60 1hux_A Activator of (R)-2-hydr 86.1 0.78 2.7E-05 40.8 4.9 22 96-117 4-25 (270)
61 4gni_A Putative heat shock pro 85.8 4 0.00014 37.8 9.8 52 207-260 165-222 (409)
62 3i33_A Heat shock-related 70 k 85.1 4.8 0.00017 37.0 10.0 53 207-261 173-232 (404)
63 3qfu_A 78 kDa glucose-regulate 83.6 4.4 0.00015 37.0 8.9 52 207-260 168-223 (394)
64 4b9q_A Chaperone protein DNAK; 73.1 16 0.00056 36.0 9.9 53 207-261 150-206 (605)
65 1iv0_A Hypothetical protein; r 69.4 31 0.0011 25.8 8.6 21 96-116 2-22 (98)
66 1hjr_A Holliday junction resol 66.1 14 0.00049 30.2 6.6 22 96-117 2-23 (158)
67 3hi0_A Putative exopolyphospha 63.3 18 0.00062 35.0 7.7 76 80-157 2-79 (508)
68 3nuw_A 2-OXO-3-deoxygalactonat 62.8 9.1 0.00031 34.8 5.1 52 95-154 6-57 (295)
69 3mdq_A Exopolyphosphatase; str 61.3 32 0.0011 31.0 8.6 62 96-157 5-68 (315)
70 1nu0_A Hypothetical protein YQ 57.4 53 0.0018 26.1 8.4 23 95-117 3-25 (138)
71 3t69_A Putative 2-dehydro-3-de 57.1 8.6 0.00029 35.5 4.0 54 95-155 7-60 (330)
72 2fsj_A Hypothetical protein TA 55.6 18 0.00063 32.8 6.0 51 93-152 188-238 (346)
73 1t6c_A Exopolyphosphatase; alp 54.1 33 0.0011 31.0 7.4 62 96-157 13-76 (315)
74 4ep4_A Crossover junction endo 51.3 77 0.0026 26.1 8.6 22 96-117 2-23 (166)
75 2ews_A Pantothenate kinase; PA 46.7 13 0.00043 33.6 3.3 19 94-112 19-37 (287)
76 3psi_A Transcription elongatio 46.6 2.4E+02 0.0082 30.5 13.5 102 96-239 517-628 (1219)
77 3aap_A Ectonucleoside triphosp 45.8 54 0.0019 30.1 7.6 61 94-156 2-64 (353)
78 3cet_A Conserved archaeal prot 44.3 16 0.00053 33.9 3.5 20 97-116 2-21 (334)
79 3psf_A Transcription elongatio 43.6 1.7E+02 0.006 30.9 11.7 56 96-161 520-580 (1030)
80 1vhx_A Putative holliday junct 42.9 33 0.0011 27.6 4.9 22 96-117 4-25 (150)
81 3qfu_A 78 kDa glucose-regulate 42.4 1.2E+02 0.0039 27.2 9.2 29 89-117 200-228 (394)
82 1u6z_A Exopolyphosphatase; alp 41.6 65 0.0022 31.1 7.7 63 96-158 12-76 (513)
83 3cer_A Possible exopolyphospha 39.1 57 0.0019 29.8 6.5 59 96-158 17-82 (343)
84 3tai_A DNA double-strand break 39.0 29 0.00098 33.3 4.4 48 50-101 24-71 (471)
85 1dkg_D Molecular chaperone DNA 34.3 19 0.00064 32.7 2.4 52 208-261 151-206 (383)
86 1mul_A NS2, HU-2, DNA binding 33.6 75 0.0026 22.9 5.2 36 38-73 4-39 (90)
87 1p71_A DNA-binding protein HU; 32.1 76 0.0026 23.1 5.1 36 38-73 4-39 (94)
88 1b8z_A Protein (histonelike pr 31.9 78 0.0027 22.7 5.1 36 38-73 4-39 (90)
89 1nvp_D Transcription initiatio 31.8 91 0.0031 23.9 5.6 43 35-77 12-54 (108)
90 3g2b_A Coenzyme PQQ synthesis 31.7 56 0.0019 24.2 4.3 35 34-68 55-89 (95)
91 3rhi_A DNA-binding protein HU; 31.7 73 0.0025 23.2 4.9 35 39-73 8-42 (93)
92 3zyy_X Iron-sulfur cluster bin 31.4 72 0.0025 31.9 6.2 24 93-116 204-227 (631)
93 3i33_A Heat shock-related 70 k 30.9 1.9E+02 0.0065 26.0 8.8 24 94-117 213-236 (404)
94 2o97_B NS1, HU-1, DNA-binding 30.8 77 0.0026 22.8 4.9 36 38-73 4-39 (90)
95 1jce_A ROD shape-determining p 30.3 30 0.001 30.8 3.0 54 208-263 111-167 (344)
96 1nh2_D Transcription initiatio 30.3 98 0.0034 24.3 5.6 44 34-77 15-58 (121)
97 3c4i_A DNA-binding protein HU 30.2 84 0.0029 23.1 5.1 36 38-73 4-39 (99)
98 2v7y_A Chaperone protein DNAK; 29.1 36 0.0012 32.5 3.6 52 208-261 125-179 (509)
99 3d2f_A Heat shock protein homo 28.7 2.1E+02 0.0073 28.4 9.2 23 94-116 196-218 (675)
100 1owf_A IHF-alpha, integration 28.2 96 0.0033 22.8 5.1 36 38-73 6-41 (99)
101 2f9w_A Pantothenate kinase; CO 28.2 37 0.0013 30.1 3.2 18 96-113 24-41 (271)
102 2kho_A Heat shock protein 70; 27.9 32 0.0011 33.9 2.9 19 95-113 2-20 (605)
103 2zrr_A Mundticin KS immunity p 26.5 1.1E+02 0.0036 24.0 5.1 40 30-69 30-71 (118)
104 4gni_A Putative heat shock pro 26.4 2.4E+02 0.0084 25.4 8.7 24 94-117 204-227 (409)
105 1yuw_A Heat shock cognate 71 k 25.1 2.4E+02 0.0082 27.1 8.7 23 94-116 192-214 (554)
106 1yuw_A Heat shock cognate 71 k 24.2 36 0.0012 33.0 2.5 52 208-261 155-211 (554)
107 1nxu_A Hypothetical oxidoreduc 23.6 67 0.0023 29.4 4.1 56 34-92 5-60 (333)
108 1owf_B IHF-beta, integration H 23.5 1.4E+02 0.0047 21.5 5.2 36 38-73 4-40 (94)
109 3s5p_A Ribose 5-phosphate isom 22.9 50 0.0017 27.4 2.8 66 202-269 30-102 (166)
110 3i0p_A Malate dehydrogenase; a 22.9 82 0.0028 29.2 4.6 57 33-92 10-67 (365)
111 4ehu_A Activator of 2-hydroxyi 22.7 1.2E+02 0.0041 25.8 5.5 48 96-152 94-141 (276)
112 3uoe_A Dehydrogenase; structur 22.4 67 0.0023 29.8 3.9 58 32-92 26-83 (357)
113 2v7y_A Chaperone protein DNAK; 22.0 3.1E+02 0.01 25.9 8.7 23 94-116 160-182 (509)
114 3d2f_A Heat shock protein homo 21.9 47 0.0016 33.2 2.9 52 208-261 154-215 (675)
115 2x06_A L-sulfolactate dehydrog 21.8 64 0.0022 29.7 3.6 56 34-92 5-60 (344)
116 1xrh_A Ureidoglycolate dehydro 21.4 76 0.0026 29.3 4.0 57 33-92 6-62 (351)
117 1wtj_A Ureidoglycolate dehydro 21.3 73 0.0025 29.3 3.9 58 33-93 14-71 (343)
118 4h8a_A Ureidoglycolate dehydro 20.8 64 0.0022 29.6 3.3 57 33-92 6-62 (339)
119 4em8_A Ribose 5-phosphate isom 20.1 26 0.00087 28.6 0.4 65 202-269 16-87 (148)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=1.6e-73 Score=557.24 Aligned_cols=245 Identities=37% Similarity=0.608 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC--CCcceeeecccccCCCCcccccEEEEeeCCceEEEEEE
Q 022975 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (289)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V 112 (289)
.++.+.++++.++|.++.++|++|+++|.+||++||++++ .|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 15 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V 94 (470)
T 3f9m_A 15 GMKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94 (470)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEE
Confidence 3456677788889999999999999999999999998763 47899999999999999999999999999999999999
Q ss_pred EeCCCc--ceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEE
Q 022975 113 QLGGRE--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (289)
Q Consensus 113 ~l~g~~--~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~L 190 (289)
+|.|++ .+.+++.+++|+||++++.+++++||||||+||.+|+++++.. ++.+|||||||||++|+++++|+|
T Consensus 95 ~L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~L 169 (470)
T 3f9m_A 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGIL 169 (470)
T ss_dssp EEEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEE
T ss_pred EECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEE
Confidence 998765 3456667789999999999999999999999999999988754 367999999999999999999999
Q ss_pred EecccceeccCCCCCcHHHHHHHHHHHcC-CCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCcc
Q 022975 191 IKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKW 269 (289)
Q Consensus 191 i~wtKgf~~~~~~g~dv~~~L~~al~r~~-l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~ 269 (289)
++|||||++++++|+||+++|++|++|++ ++++|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+++
T Consensus 170 i~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~ 249 (470)
T 3f9m_A 170 LNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELV 249 (470)
T ss_dssp CCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTS
T ss_pred EeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccccc
Confidence 99999999999999999999999999998 79999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceEEEccCCc
Q 022975 270 HGLLPKSGEMVSKLSADI 287 (289)
Q Consensus 270 ~~~~~~~~~miIN~E~~~ 287 (289)
++ ..++||||||.|.
T Consensus 250 ~~---~~~~miINtEwG~ 264 (470)
T 3f9m_A 250 EG---DEGRMCVNTEWGA 264 (470)
T ss_dssp SC---CSSEEEEECCGGG
T ss_pred cC---CCCcEEEeechhh
Confidence 75 5688999999885
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-69 Score=525.53 Aligned_cols=236 Identities=39% Similarity=0.623 Sum_probs=219.2
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCc
Q 022975 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (289)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g~~ 118 (289)
+.++++.++|.++.++|++++++|.+||++||++++ |+++||||||+++|+|+|+|.|||||||||||||++|+|.|+
T Consensus 4 ~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~- 81 (445)
T 3hm8_A 4 RLLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG- 81 (445)
T ss_dssp HHHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc-
Confidence 345667777889999999999999999999999876 789999999999999999999999999999999999999775
Q ss_pred ceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEEeccccee
Q 022975 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (289)
Q Consensus 119 ~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li~wtKgf~ 198 (289)
+...+++|+||++++.+++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|++|||||+
T Consensus 82 ---~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~ 153 (445)
T 3hm8_A 82 ---VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFK 153 (445)
T ss_dssp ---EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCC
T ss_pred ---eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeecccc
Confidence 3445578999999998999999999999999999987654 46799999999999999999999999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCcccCCCCCCC
Q 022975 199 IEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSG 277 (289)
Q Consensus 199 ~~~~~g~dv~~~L~~al~r~-~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~~ 277 (289)
+++++|+||+++|+++++|+ +++++|+||+|||||||++++|.++++.||+|+|||||+||+|+.++|+++++ +.+
T Consensus 154 ~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~ 230 (445)
T 3hm8_A 154 ASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSG 230 (445)
T ss_dssp CBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSS
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCC
Confidence 99999999999999999998 58999999999999999999999999999999999999999999999999875 467
Q ss_pred ceEEEccCCc
Q 022975 278 EMVSKLSADI 287 (289)
Q Consensus 278 ~miIN~E~~~ 287 (289)
+|+||||.|.
T Consensus 231 ~miINtEwG~ 240 (445)
T 3hm8_A 231 RMCINMEWGA 240 (445)
T ss_dssp EEEEECCGGG
T ss_pred cEEEEcchhh
Confidence 9999999885
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=3.7e-68 Score=522.01 Aligned_cols=250 Identities=35% Similarity=0.566 Sum_probs=230.0
Q ss_pred ccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEE
Q 022975 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (289)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~ 111 (289)
..+.++.+.+++|+++|.++.++|++++++|.+||++||++++ ++++||||||+++|+|+|+|.||||||||||||+++
T Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~ 96 (485)
T 3o8m_A 18 DVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVL 96 (485)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEE
Confidence 3567889999999999999999999999999999999998875 689999999999999999999999999999999999
Q ss_pred EEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEE
Q 022975 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (289)
Q Consensus 112 V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li 191 (289)
|+++|++. .+...++|+||++++.+++++||||||+||.+|+++++.+. .++.+++|||||||++|+++++++|+
T Consensus 97 V~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li 171 (485)
T 3o8m_A 97 VKLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQ 171 (485)
T ss_dssp EEEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEEC
T ss_pred EEECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEe
Confidence 99988753 23345689999999988899999999999999999986542 14679999999999999999999999
Q ss_pred ecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCcccC
Q 022975 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (289)
Q Consensus 192 ~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~ 271 (289)
+|||||++++++|+||+++|+++++|+|+||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+|+++
T Consensus 172 ~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~ 251 (485)
T 3o8m_A 172 RWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEG 251 (485)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTT
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred ----CCCCCCceEEEccCCc
Q 022975 272 ----LLPKSGEMVSKLSADI 287 (289)
Q Consensus 272 ----~~~~~~~miIN~E~~~ 287 (289)
..++.++|+||||.|.
T Consensus 252 ~~~~~~~~~~~miINtEwG~ 271 (485)
T 3o8m_A 252 LLPEDIGPDSPMAINCEYGS 271 (485)
T ss_dssp TCCTTSCTTCEEEEECCGGG
T ss_pred cccccCCCCCcEEEEccccc
Confidence 3345678999999885
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=2.2e-65 Score=500.05 Aligned_cols=245 Identities=36% Similarity=0.592 Sum_probs=225.0
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcc--CCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEE
Q 022975 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (289)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~ 111 (289)
++.+.+.+++|+++|.++.++|++|+++|.+||++||++ +..|+++||||||+++|+|+|+|+||||||||||||+++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 5 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 445678899999999999999999999999999999983 334889999999999999999999999999999999999
Q ss_pred EEeCC-CcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEE
Q 022975 112 VQLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (289)
Q Consensus 112 V~l~g-~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~L 190 (289)
|+++| ++. .....++|+||++++.+++++||||||+||.+|+++++.. .+.+++|||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99988 542 2333468999999888899999999999999999987653 246999999999999999999999
Q ss_pred EecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCccc
Q 022975 191 IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (289)
Q Consensus 191 i~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~ 270 (289)
++|||||++++++|+||+++|+++|+|+++||+|++|+|||+||+++++|.++++.||+|+|||+|+||+|+.+.|+|+.
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCceEEEccCCc
Q 022975 271 GLLPKSGEMVSKLSADI 287 (289)
Q Consensus 271 ~~~~~~~~miIN~E~~~ 287 (289)
+. +.+||+||+|.|.
T Consensus 238 g~--~~g~m~In~EwG~ 252 (451)
T 1bdg_A 238 GV--KEPEVVINTEWGA 252 (451)
T ss_dssp SC--SSSEEEEECCGGG
T ss_pred CC--ccCcEEEecCccc
Confidence 74 6789999999774
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=4e-61 Score=504.10 Aligned_cols=240 Identities=39% Similarity=0.619 Sum_probs=218.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC--CCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCC
Q 022975 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
+.++++.++|.++.++|++|+++|++||++||+.+ +.|+++||||||+++|+|+|+|+|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 45677888888999999999999999999999754 3478999999999999999999999999999999999999974
Q ss_pred CcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEEecccc
Q 022975 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (289)
Q Consensus 117 ~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li~wtKg 196 (289)
...+++++.+++|+||++++.+++++||||||+||.+|+++++.. ++.+++|||||||++|+++++++|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 322355566679999999887899999999999999999987654 256899999999999999999999999999
Q ss_pred eeccCCCCCcHHHHHHHHHHHc-CCCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCcccCCCCC
Q 022975 197 FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 275 (289)
Q Consensus 197 f~~~~~~g~dv~~~L~~al~r~-~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~ 275 (289)
|++++++|+||+++|+++|+|+ +++|++++|+|||+|||++++|.++++.||+|+|||+|+||+|+.++|+++.+ +
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999863 6
Q ss_pred CCceEEEccCC
Q 022975 276 SGEMVSKLSAD 286 (289)
Q Consensus 276 ~~~miIN~E~~ 286 (289)
.+||+||+|.|
T Consensus 700 ~g~m~In~EwG 710 (917)
T 1cza_N 700 QGQMCINMEWG 710 (917)
T ss_dssp SSEEEEECCGG
T ss_pred cCcEEEecccc
Confidence 78999999966
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=1.1e-58 Score=453.00 Aligned_cols=241 Identities=20% Similarity=0.249 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCC
Q 022975 37 AVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
-.+.+++|+++|.+|.++|++|+++|.+||+ ||++++ |+++||||||+++|+|+|+|+||||||||||||+++|+++|
T Consensus 5 ~~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G 82 (457)
T 2yhx_A 5 DXSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAG 82 (457)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEET
T ss_pred cHHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCC
Confidence 3567888999999999999999999999999 998765 67999999999999999999999999999999999999988
Q ss_pred CcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEEecccc
Q 022975 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (289)
Q Consensus 117 ~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li~wtKg 196 (289)
+.. .+...+++++|++.+.++++++||||+++|.+|+++++.+. ++.+++|||||||+.|.++++++|++|+||
T Consensus 83 ~~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~----~~~~~lGi~fs~P~~q~~~~~g~l~~wtKg 156 (457)
T 2yhx_A 83 RQE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSX----AGSVPLGFTFXEAGAKEXVIKGQITXQAXA 156 (457)
T ss_dssp TEE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSC----SSCEEEEEECCSCCCCSBTTCCBCSSCCTT
T ss_pred Cee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhccccc----ccccceeeEEEEEEEEeecCceEEEeeccC
Confidence 742 33445689999988878899999999999999999875431 356899999999999999999999999999
Q ss_pred eeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCcccCCC-C-
Q 022975 197 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-P- 274 (289)
Q Consensus 197 f~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~-~- 274 (289)
|++++.+ ||+++|+++++|+++|++|++|+|||++|+++++|.++++.||+|+|||+|+||+++.++|+|+++.. +
T Consensus 157 f~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~ 234 (457)
T 2yhx_A 157 FSLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXG 234 (457)
T ss_dssp CCCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSC
T ss_pred CCcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCcccccccccccc
Confidence 9999988 99999999999999999999999999999999999999999999999999999999999999996531 2
Q ss_pred CCCceEEEccCCc
Q 022975 275 KSGEMVSKLSADI 287 (289)
Q Consensus 275 ~~~~miIN~E~~~ 287 (289)
..++|+||+|.|.
T Consensus 235 ~~g~~~in~EwG~ 247 (457)
T 2yhx_A 235 GAGXMXICCDQSS 247 (457)
T ss_dssp SSCCEEEECCCTT
T ss_pred cCCceEEEEEccc
Confidence 4689999999985
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=2.2e-54 Score=453.05 Aligned_cols=246 Identities=35% Similarity=0.545 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC--CCcceeeecccccCCCCcccccEEEEeeCCceEEEEE
Q 022975 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (289)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~ 111 (289)
+.++.+.+++|.++|.+|.++|++++++|.+||++||+.+. .|+++||||||+++|+|+|+|+||||||||||||+++
T Consensus 15 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~l 94 (917)
T 1cza_N 15 KDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILR 94 (917)
T ss_dssp -CHHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEE
Confidence 34456678999999999999999999999999999998653 4789999999999999999999999999999999999
Q ss_pred EEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEE
Q 022975 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (289)
Q Consensus 112 V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li 191 (289)
|+++|++...++...+++++|++++.++++++|+|||++|.+|+++++.. .+.+++|||||||++|+++++|+|+
T Consensus 95 v~~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~ 169 (917)
T 1cza_N 95 VQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILI 169 (917)
T ss_dssp EEEEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEEC
T ss_pred EEecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEE
Confidence 99987643334344568999988776788999999999999999987643 2456899999999999999999999
Q ss_pred ecccceeccCCCCCcHHHHHHHHHHHcC-CCceEEEEEechHHHhhcccccCCCcEEEEEEccCccceeeecccccCccc
Q 022975 192 KWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (289)
Q Consensus 192 ~wtKgf~~~~~~g~dv~~~L~~al~r~~-l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~ 270 (289)
+|+|||++++++|+|++++|+++|+|++ +|+++++|+|||+||+++++|.++++.||+|+|||+|+||+++.++|+++.
T Consensus 170 ~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~ 249 (917)
T 1cza_N 170 TWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVE 249 (917)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred ecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCccccccc
Confidence 9999999999999999999999999987 899999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCceEEEccCCc
Q 022975 271 GLLPKSGEMVSKLSADI 287 (289)
Q Consensus 271 ~~~~~~~~miIN~E~~~ 287 (289)
+ ..+||+||+|.|.
T Consensus 250 G---~~g~~~in~E~G~ 263 (917)
T 1cza_N 250 G---DEGRMCINTEWGA 263 (917)
T ss_dssp C---CSSEEEEECCGGG
T ss_pred C---CCCceEEeccccc
Confidence 5 3679999999985
No 8
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.71 E-value=3.2e-16 Score=151.00 Aligned_cols=205 Identities=16% Similarity=0.197 Sum_probs=150.1
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhhccCCC----C---cceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCC
Q 022975 44 MEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----S---KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 44 ~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s---~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
+.+.+.++...+..+.+.|.+ +||-.+.. | .-+.+.++. | +.+++|+||+|||++|++++++.|
T Consensus 59 la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~G 129 (429)
T 1z05_A 59 LSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELGG 129 (429)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETTS
T ss_pred HHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCCC
Confidence 555677788888888877766 57633211 0 112222222 2 457899999999999999999988
Q ss_pred CcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEEecccc
Q 022975 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (289)
Q Consensus 117 ~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li~wtKg 196 (289)
+ ++.. ..++.|. .+.+++++.|++.|.+++++.+... .+...+|++++.|++.. .+.+. +...
T Consensus 130 ~---il~~--~~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~---~g~v~-~~~~ 192 (429)
T 1z05_A 130 E---VLID--TKIDIHE----IDQDDVLARLLFEIEEFFQTYAAQL----DRVTSIAITLPGLVNSE---QGIVL-QMPH 192 (429)
T ss_dssp C---EEEE--EEEECCC----CBHHHHHHHHHHHHHHHHHHTTTTC----CEEEEEEEEESSEEETT---TTEEE-ECSS
T ss_pred C---EEEE--EEEcCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceEEEEEeccCcEeCC---CCeEe-ecCC
Confidence 6 3432 2344442 2468899999999999998875432 35678888999988653 23332 2211
Q ss_pred eeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEEEEccCccceeeecccccCcccCC
Q 022975 197 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272 (289)
Q Consensus 197 f~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~iglIlGTG~Na~yie~~~~i~k~~~~ 272 (289)
+. ..+.++.+.|++.+ ++| +.+.||+.+..+++.+. +.+..+.+++|||++++++.+.+.+.+..+.
T Consensus 193 l~---w~~~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~ 263 (429)
T 1z05_A 193 YN---VKNLALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGN 263 (429)
T ss_dssp SB---CSSBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCTTTTC
T ss_pred CC---CCCCCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeCCCCc
Confidence 21 22489999999999 899 89999999999999873 5578999999999999999999988888888
Q ss_pred CCCCCceEEEc
Q 022975 273 LPKSGEMVSKL 283 (289)
Q Consensus 273 ~~~~~~miIN~ 283 (289)
++|.|||.++.
T Consensus 264 AGEiGH~~v~~ 274 (429)
T 1z05_A 264 IGELGHIQIDP 274 (429)
T ss_dssp TTBCTTSBCCT
T ss_pred ccccCceEEcC
Confidence 88999999874
No 9
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.69 E-value=7.6e-16 Score=146.18 Aligned_cols=207 Identities=12% Similarity=0.148 Sum_probs=149.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC---CCcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCcc
Q 022975 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEG---GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (289)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~---~s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g~~~ 119 (289)
++.+...++...+..+.+.+.+ +||-.+. .|.-=-=|..+.- ..+.+++|+||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~---~~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKI---SPNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEE---CGGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEE---ccCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4566677888888888887766 5773221 0100000111110 124568999999999999999999886
Q ss_pred eeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeec-c--CCceEEEecccc
Q 022975 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQT-S--IASGDLIKWTKG 196 (289)
Q Consensus 120 ~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~-~--~~~~~Li~wtKg 196 (289)
++.. ..++.|.. .+.+++++.+++.|.+++++.+... .+...+|++++.|++.. + ....++ .|.
T Consensus 110 -vl~~--~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~~g~v~~~~~l-~w~-- 176 (380)
T 2hoe_A 110 -ILAH--EAHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG----SKLSALTVAAPGPIDTERGIIIDPRNF-PLS-- 176 (380)
T ss_dssp -EEEE--EEEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT----CCCCEEEEEESSCEETTTTEECCCSSC-TTB--
T ss_pred -EEEE--EEEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCc----CcEEEEEEEeeccEECCCCEEeccCCC-CCc--
Confidence 3432 23444432 2568899999999999998764321 24677888888888652 2 112222 454
Q ss_pred eeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCC--CcEEEEEEccCccceeeecccccCcccCCCC
Q 022975 197 FSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERAHAIPKWHGLLP 274 (289)
Q Consensus 197 f~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~--~~~iglIlGTG~Na~yie~~~~i~k~~~~~~ 274 (289)
+.++.+.|++.+ ++| +.+.||+.++.+++.+... +..+.+++|||++++++.+.+.+.+..+.++
T Consensus 177 -------~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aG 243 (380)
T 2hoe_A 177 -------QIPLANLLKEKY---GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAG 243 (380)
T ss_dssp -------TSCHHHHHHHHH---CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCC
T ss_pred -------CCChHHHHHHHh---CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCccc
Confidence 489999999999 888 8999999999999987543 7899999999999999999999999888888
Q ss_pred CCCceEEEc
Q 022975 275 KSGEMVSKL 283 (289)
Q Consensus 275 ~~~~miIN~ 283 (289)
|.|||.++.
T Consensus 244 EiGh~~v~~ 252 (380)
T 2hoe_A 244 EIGYTRVFN 252 (380)
T ss_dssp CGGGCEEEC
T ss_pred cccceEecC
Confidence 999999974
No 10
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.68 E-value=9.9e-16 Score=146.23 Aligned_cols=210 Identities=12% Similarity=0.118 Sum_probs=150.8
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCC----CcceeeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCc
Q 022975 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (289)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~~~Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g~~ 118 (289)
++.+.+.++...+..+.+.|.+ +||-.+.. |.----|..+.--| +.+++|+||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4666777888888888887776 57743211 11001111111112 4578999999999999999999886
Q ss_pred ceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeeeeeeeeeeccCCceEEEeccccee
Q 022975 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (289)
Q Consensus 119 ~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfP~~q~~~~~~~Li~wtKgf~ 198 (289)
++.. ..++.|. .+.+++++.+++.|.+++++.+... .+...+|++++.|++.. .+.+. +...+
T Consensus 108 --il~~--~~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~---~g~v~-~~~~l- 170 (406)
T 1z6r_A 108 --LVVE--ESQELAL----KDDLPLLDRIISHIDQFFIRHQKKL----ERLTSIAITLPGIIDTE---NGIVH-RMPFY- 170 (406)
T ss_dssp --EEEE--EEEECCS----SCSSCHHHHHHHHHHHHHHHTGGGC----CCEEEEEEEESSEEETT---TTEEE-ECTTC-
T ss_pred --EEEE--EEecCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceeEEEEEeecCEeCC---CCEEe-cCCCC-
Confidence 3432 2333332 3567899999999999998765321 35678888999988652 34554 22211
Q ss_pred ccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEEEEccCccceeeecccccCcccCCCC
Q 022975 199 IEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 274 (289)
Q Consensus 199 ~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~ 274 (289)
++..+.++.+.|++.+ ++| +.+.||+.+..+++.+. +.+..+.+++|||++++++.+.+.+.+..+.++
T Consensus 171 -~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AG 243 (406)
T 1z6r_A 171 -EDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243 (406)
T ss_dssp -TTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCB
T ss_pred -CCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCc
Confidence 2233589999999999 888 78999999999999863 457899999999999999999998888888788
Q ss_pred CCCceEEEc
Q 022975 275 KSGEMVSKL 283 (289)
Q Consensus 275 ~~~~miIN~ 283 (289)
|.|||.++.
T Consensus 244 EiGh~~v~~ 252 (406)
T 1z6r_A 244 EIGHTQVDP 252 (406)
T ss_dssp CGGGSBSCT
T ss_pred cCCceEecC
Confidence 999999873
No 11
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.68 E-value=3.5e-16 Score=144.30 Aligned_cols=164 Identities=17% Similarity=0.205 Sum_probs=126.8
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (289)
+++|+||+|||++|++++++.|+ ++.. ..++.|.. .+.+++++.+++.|.+++++.+... .+...+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~--~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQK--WSIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK----EDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEE--EEEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG----GGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEE--EEEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc----cceeEEEE
Confidence 57999999999999999999876 3432 23444432 3567899999999999998875432 34677888
Q ss_pred eeeeeeeeccCCceEEEecccceeccCCCCC-cHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEE
Q 022975 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (289)
Q Consensus 175 tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~-dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~igl 249 (289)
+++.|++.. .+.+. ++..+ +..+. ++.+.|++.+ ++| +.+.||+.++.+++.+. +.+..+.+
T Consensus 74 ~~pG~vd~~---~g~v~-~~~~l---~w~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l 140 (326)
T 2qm1_A 74 GTPGSVDIE---KGTVV-GAYNL---NWTTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVIFI 140 (326)
T ss_dssp EESSEEETT---TTEEE-CBGGG---TBCSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred ecccceeCC---CCEEE-ecCCC---CccCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 888888652 23332 11111 12247 8999999998 888 78999999999998763 45789999
Q ss_pred EEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 250 IlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
++|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 141 ~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~ 174 (326)
T 2qm1_A 141 TLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDP 174 (326)
T ss_dssp EESSSEEEEEEETTEECCCSSSCTTCGGGSBSCT
T ss_pred EECCceEEEEEECCEEeecCCCcccccCcEEECC
Confidence 9999999999999999888888788999999874
No 12
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.61 E-value=4.5e-15 Score=138.25 Aligned_cols=158 Identities=18% Similarity=0.269 Sum_probs=123.5
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
++|++|+|||++|++++++.|+ ++.. .+++.|. .+.+++++.|.+.+.++.++.+ ....+|++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVAT--ERVPTPT----DDYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEE--EEEECCT----TCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEE--EEecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 6999999999999999999886 3432 2344443 2568899999999999887653 24678888
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEEEE
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~iglIl 251 (289)
++.|++.. .+.+ .++ ++....+.++.+.|+++| ++| +.+.||+.+..+++.+. +.+..+.+++
T Consensus 88 ~pG~vd~~---~g~v-~~~---~~~~~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~ 154 (327)
T 4db3_A 88 LPGMEDAD---DATV-LTV---NVPAAKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGLIL 154 (327)
T ss_dssp ESEEECTT---TCCE-EES---SSGGGTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEE
T ss_pred eeccEeCC---CCEE-EcC---CCccccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEEEe
Confidence 88888642 1222 222 122234589999999999 898 78999999999999874 4578899999
Q ss_pred ccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 155 GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~ 186 (327)
T 4db3_A 155 GTGFGGGLIYEGKVFSGRNNVAGELGHMRLPL 186 (327)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBCCH
T ss_pred CccceEEEEECCEEeecCCCcCcccccEEecc
Confidence 99999999999988888888888999999875
No 13
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.61 E-value=1.7e-15 Score=140.47 Aligned_cols=154 Identities=21% Similarity=0.311 Sum_probs=121.7
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (289)
+++|+||+|||++|+++++++|+ ++.. ..++.| .+.+++++.|++.|.+++++. +...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~--~~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILST--FKVATP-----PTAEGIVDAICAAVAGASEGH---------DVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCC--EEEECC-----SSHHHHHHHHHHHHHHHHTTC---------CEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEE--EEeeCC-----CCHHHHHHHHHHHHHHHHhhc---------CceEEEE
Confidence 46899999999999999999886 3322 223332 346889999999999987542 3678888
Q ss_pred eeeeeeeecc---CCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccc----cCCCcEE
Q 022975 175 TFSFPVRQTS---IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIA 247 (289)
Q Consensus 175 tfSfP~~q~~---~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y----~~~~~~i 247 (289)
+++.|++... ..+.++ .|. +.++.+.|++.+ ++| +.+.||+.+..+++.+ .+.+..+
T Consensus 63 ~~pG~vd~~~g~v~~~~~l-~w~---------~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~ 126 (321)
T 3vgl_A 63 GAAGYVDDKRATVLFAPNI-DWR---------HEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVI 126 (321)
T ss_dssp EESSEECTTSSCEEECSSS-CCE---------EECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred eccccEeCCCCEEEeCCCC-CCc---------CCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEE
Confidence 8889886532 111223 554 378999999999 898 8999999999999887 3468899
Q ss_pred EEEEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 248 AVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 248 glIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
.+++|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 127 ~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~ 162 (321)
T 3vgl_A 127 CITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVP 162 (321)
T ss_dssp EEEESSSEEEEEEETTEECCCTTSCCCCGGGSBSST
T ss_pred EEEeCcceEEEEEECCEEecCCCCCCccccceEecC
Confidence 999999999999999999888888888999999864
No 14
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.59 E-value=1e-14 Score=135.13 Aligned_cols=159 Identities=18% Similarity=0.259 Sum_probs=122.4
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (289)
+.+|+||+|||++|++++++.|+ ++.. .+++.+. .+.+++++.|.+.+.++..+.+ ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~--~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWE--KRVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEE--EEEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEE--EEecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 46999999999999999999886 3432 2344433 1467899999999988876542 2456899
Q ss_pred eeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEEE
Q 022975 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVI 250 (289)
Q Consensus 175 tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~iglI 250 (289)
+++.|++... +.+. ++ +.+...+.++.+.|++.+ ++| +.+.||+.+..+++.+. +.+..+.++
T Consensus 87 ~~pG~vd~~~---g~v~-~~---~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPETED---GTLY-AA---NVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCCTT---SCCB-CT---TCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEECCC---CEEE-cc---CCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 9999986532 2222 22 222334689999999998 888 89999999999998764 457889999
Q ss_pred EccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 251 LGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 251 lGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
+|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 154 ~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~ 186 (327)
T 2ap1_A 154 LGTGVGGGLVLNGKPITGQSYITGEFGHMRLPV 186 (327)
T ss_dssp ESSSEEEEEEETTEEECCTTSCTTCGGGSBCCH
T ss_pred ECCcEEEEEEECCEEeecCCCcccccccEEEec
Confidence 999999999999988888888788999998864
No 15
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.57 E-value=1.2e-14 Score=133.99 Aligned_cols=159 Identities=17% Similarity=0.123 Sum_probs=121.3
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
++|+||+|||++|++++++++. +. ...++.|.. ..+++++.|++.+.+++++.. .+...+|++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~~----l~--~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKRL----LS--KVVVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSSB----SC--CEEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCCc----EE--EEEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 5899999999999999988632 22 123444432 237899999999999987652 246778999
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEEEE
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~iglIl 251 (289)
++.|++... +.+...+ ++++..+.++.+.|++.+ ++| +.+.||+.+..+++.+. +.+..+.+++
T Consensus 65 ~pG~vd~~~---g~v~~~~---~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 132 (302)
T 3vov_A 65 TPGPLDFRR---GVIRFAP---NIPGVQDFPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLYLTV 132 (302)
T ss_dssp ESSCEETTT---TEEC------CCTTCTTCCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEE
T ss_pred ecccEeCCC---CEEEcCC---CCCCcCCCChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 999996532 2332111 122233589999999999 899 88999999999999873 4678999999
Q ss_pred ccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 133 GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~~ 164 (302)
T 3vov_A 133 STGIGGGVVLGGRVLRGERGQGGELGHLTLLP 164 (302)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBSST
T ss_pred CCceeEEEEECCEEeeCCCCCCccccceEecC
Confidence 99999999999998888888888999998864
No 16
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.57 E-value=5.5e-15 Score=140.55 Aligned_cols=162 Identities=17% Similarity=0.168 Sum_probs=121.2
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHH---HHHHHHHhcCCCCCCCCCCe
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA---ALAKFVATEGEGFHVSPGRQ 169 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~---~I~~fl~~~~~~~~~~~~~~ 169 (289)
+.+++|++|+|||++|+++++ .|+ ++... ..++.+.. +.+++++.|++ .+.++++ .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 456899999999999999999 775 33211 13344431 56788988888 6655532 146
Q ss_pred eeeeeeeeeeeeeccCCceEEEecccceeccCCC-CCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccC------
Q 022975 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV-GEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN------ 242 (289)
Q Consensus 170 ~~lG~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~-g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~------ 242 (289)
..+|++++.|++.. .+.+..-+ ++++.. |.|+.+.|++.| ++| +.+.||+.+..+++.+..
T Consensus 68 ~gIGIavPG~Vd~~---~G~i~~~~---nlp~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADYQ---AGIIGDLP---NFPSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEETT---TTEECCCT---TCGGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeCC---CCEEEeCC---CcccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcccc
Confidence 78899999999653 23332111 122223 589999999999 999 899999999999997754
Q ss_pred -----------CCcEEEEEEccCccceeeecccccCcccCCCCCCCceEEEccCCc
Q 022975 243 -----------KDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKLSADI 287 (289)
Q Consensus 243 -----------~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~E~~~ 287 (289)
.+..+.+.+|||++++++.+.+.+.+..+.++|.|||. | .||-
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~-~CG~ 189 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N-KKYP 189 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C-SSCT
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C-CCCC
Confidence 47899999999999999999999988888888999998 6 6664
No 17
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.57 E-value=2.6e-14 Score=133.38 Aligned_cols=165 Identities=23% Similarity=0.224 Sum_probs=123.4
Q ss_pred cccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeee
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (289)
..++|+||+|||++|+++++++|+ ++.. ..++.| .+.+++++.+.+.+.+++++..... .+...+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~~----~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKK--YTQFNP-----KTYEERINLILQMCVEAAAEAVKLN----CRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEE--EEEECC-----SSHHHHHHHHHHHHHHHHHHHHHTT----EEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEE--EEEcCC-----CCHHHHHHHHHHHHHHHHHhccccc----CceEEEE
Confidence 468999999999999999999886 3432 233333 2457889999999999987643221 2456788
Q ss_pred eeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEE
Q 022975 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (289)
Q Consensus 174 ~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~igl 249 (289)
++++.|++.. .+.+..-+. + .++..+.++.+.|++.+ ++| +.+.||+.+..+++.+. +.+..+.+
T Consensus 95 i~~pG~vd~~---~g~v~~~~~-~-~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v~i 163 (343)
T 2yhw_A 95 ISTGGRVNPR---EGIVLHSTK-L-IQEWNSVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKGLENFVTL 163 (343)
T ss_dssp EEESSEEETT---TTEEEECCT-T-SSSCSSEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEEEE
T ss_pred EecccCEeCC---CCEEEeCCc-C-CCCCcCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 8888888652 233331110 0 01223478999999998 888 79999999999999863 45788999
Q ss_pred EEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 250 IlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
++|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 164 ~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~ 197 (343)
T 2yhw_A 164 ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSL 197 (343)
T ss_dssp EESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC
T ss_pred EECCCEEEEEEECCEEecCCCCcccccCCEEEcc
Confidence 9999999999999998888888788999999864
No 18
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.56 E-value=1.1e-14 Score=133.92 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=114.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
++|++|+|||++|+++++++|+ ++.. .+++.|. .+.+++++.+.+ ++++. .+...+|++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~~----~~~~~~~~~i~~----~~~~~--------~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILT--KSAEISG----SDGDQILAEMKV----FLAEN--------TDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEE--EEEECST----TCHHHHHHHHHH----HHHTC--------TTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEE--EEecCCC----CCHHHHHHHHHH----HHhhc--------CCeeEEEEe
Confidence 6899999999999999999886 4432 2344432 233556655544 44332 245778999
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccc----cCCCcEEEEEE
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVIL 251 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y----~~~~~~iglIl 251 (289)
++.|++.. .+.+..-+ ++++..+.++.+.|++.+ ++| +.+.||+.+..+++.+ .+.+..+.+++
T Consensus 64 ~pG~vd~~---~g~v~~~~---~l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 131 (297)
T 4htl_A 64 APGYVNPK---TGLITMGG---AIRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCLTI 131 (297)
T ss_dssp ESSEECTT---TCEEEECT---TCGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCcceeCC---CCEEEeCC---CCCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 99998642 23332211 112223589999999999 899 8999999999999987 35688999999
Q ss_pred ccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 132 GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~ 163 (297)
T 4htl_A 132 GTGIGGGIFSNGELVRGGRFRAGEFGYMFSER 163 (297)
T ss_dssp SSSEEEEEEETTEECCCTTSCCCCGGGSBSSC
T ss_pred CcceEEEEEECCEEEecCCCCcccccceEecC
Confidence 99999999999999888888888999998863
No 19
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.55 E-value=1.3e-14 Score=134.38 Aligned_cols=162 Identities=17% Similarity=0.157 Sum_probs=113.6
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
+.+++|+||+|||++|+++++++|+ ++.. .+++.|+. ..+++++.|.+.+.+++++.+. +...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~-------~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHC--EKKRTAEV----IAPGLVSGIGEMIDEQLRRFNA-------RCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEE--EEEEHHHH----HTTCHHHHHHHHHHHHHHHHTE-------EEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEE--EEecCccc----cHHHHHHHHHHHHHHHHHhcCC-------CeeEE
Confidence 4578999999999999999999886 3432 23333321 2467889999999888876532 35778
Q ss_pred eeeeeeeeeec-c--CCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccc---cCCCcE
Q 022975 173 GFTFSFPVRQT-S--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY---HNKDAI 246 (289)
Q Consensus 173 G~tfSfP~~q~-~--~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y---~~~~~~ 246 (289)
|++++.|++.. + ....++ .|.. ..+.++.+.|++.+ ++| +.+.||+.+..+++.+ .+.+..
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l-~~~~------~~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~ 135 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNL-PLTA------ADLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLV 135 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSS-SCCH------HHHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCE
T ss_pred EEeccccEeCCCCEEEeCCCC-CCcc------ccCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceE
Confidence 88888888642 2 122222 3321 01257889999998 899 8999999998876543 345678
Q ss_pred EEEEEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 247 AAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 247 iglIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
+.+++|||++++++.+.+.+.+..+.++|.|||.|+.
T Consensus 136 ~~v~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~ 172 (310)
T 3htv_A 136 LAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGD 172 (310)
T ss_dssp EEEEESSSEEEEEEETTEEECCSSSCCCC--------
T ss_pred EEEEeceeEEEEEEECCEEeecCCCCceeCcceEeCC
Confidence 9999999999999999999999888888999999863
No 20
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.54 E-value=5.3e-14 Score=127.12 Aligned_cols=164 Identities=18% Similarity=0.269 Sum_probs=113.9
Q ss_pred CCcccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 022975 90 TGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (289)
Q Consensus 90 ~G~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (289)
...+..++|++|+|||++|++++++.+. .+.. ....++.|.. .+.+++++.|.+.+.+++++.... ...
T Consensus 7 ~~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~-~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~ 75 (267)
T 1woq_A 7 KSHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLG-ERFRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAG 75 (267)
T ss_dssp ----CCCEEEEEECSSEEEEEEEETTTT--EEEE-EEEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTT
T ss_pred hcCCCCEEEEEEECCCEEEEEEEECCCC--eEEE-EEEecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Ccc
Confidence 3345567999999999999999999732 1332 1123333321 356789999999999988654311 122
Q ss_pred eeeeeeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCC-
Q 022975 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKD- 244 (289)
Q Consensus 170 ~~lG~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~- 244 (289)
..+|++++.|++ + +.+. ++-.+. ++..+.++.+.|++.| ++| +.+.||+.+..+++.+. +.+
T Consensus 76 ~~igi~~pG~v~-~----g~v~-~~~~l~-~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~~ 142 (267)
T 1woq_A 76 SPVGVTFPGIIQ-H----GVVH-SAANVD-KSWLNTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAGVKG 142 (267)
T ss_dssp CCEEEEESSCEE-T----TEEC-CCTTSC-GGGTTCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTTCCS
T ss_pred ceEEEEccceEc-C----CEEE-eCCCCC-CCCCCCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCCCCC
Confidence 468999999996 2 3332 211110 0123589999999999 898 89999999999999873 233
Q ss_pred cEEEEEEccCccceeeecccccCcccCCCCCCCceEEE
Q 022975 245 AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSK 282 (289)
Q Consensus 245 ~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN 282 (289)
..+.+++|||++++++.+.+.+.+ +|.|||.++
T Consensus 143 ~~~~l~~GtGIG~giv~~G~l~~G-----gEiGh~~v~ 175 (267)
T 1woq_A 143 TVLVITLGTGIGSAFIFDGKLVPN-----AELGHLEID 175 (267)
T ss_dssp EEEEEEESSSEEEEEEETTEEETT-----CCGGGCEET
T ss_pred cEEEEEECcceEEEEEECCEEccC-----ceeeeEEec
Confidence 578999999999999999876654 488999885
No 21
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.54 E-value=1.8e-14 Score=130.91 Aligned_cols=157 Identities=16% Similarity=0.198 Sum_probs=115.7
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
++|++|+|||++|+++++++|+ ++.. ..++.+.. .+.+++++.|.+.+.+++++ ...+|++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~--~~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDR--RELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEE--EEEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEE--EEecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999999875 3432 23343321 24678888888877766432 1358999
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCC---cEEEEEEc
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKD---AIAAVILG 252 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~---~~iglIlG 252 (289)
++.|++.. .+.+. ++- ++++..+.++.+.|++.+ ++| +.+.||+.+..+++.+.... ..+.+++|
T Consensus 63 ~pG~vd~~---~g~v~-~~~--~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~~~v~l~~G 130 (289)
T 2aa4_A 63 STGIIRDG---SLLAL-NPH--NLGGLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDITDMVFITVS 130 (289)
T ss_dssp ESSEEETT---EEECS-SGG--GGGGGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCCCEEEEEES
T ss_pred eccceeCC---CCEEE-eCC--CCCcccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCceEEEEEeC
Confidence 99998652 12221 111 111122489999999999 888 88999999999999774321 88999999
Q ss_pred cCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 253 TGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 253 TG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 131 tGiG~gii~~G~l~~G~~g~aGE~Gh~~~~~ 161 (289)
T 2aa4_A 131 TGVGGGVVSGCKLLTGPGGLAGHIGHTLADP 161 (289)
T ss_dssp SSEEEEEEETTEEECCTTSCCCCGGGSBSCT
T ss_pred ccEEEEEEECCEEeeCCCCCCccCCcEEECC
Confidence 9999999999988888888788999999874
No 22
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.53 E-value=2.1e-14 Score=132.72 Aligned_cols=152 Identities=14% Similarity=0.212 Sum_probs=111.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
.||+||+|||++|+++++++|+ ++.. .++|.. +.+++++.|++.+ ++. +...+|++
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~----~~~~t~----~~~~~l~~i~~~~----~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDR----IEFPTX----MPDETIEXVIQYF----SQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEE----EEEECC----CHHHHHHHHHHHH----TTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEE----EEecCC----ChHHHHHHHHHHh----ccC---------CceEEEEE
Confidence 6899999999999999999876 4432 223331 2456666555443 321 35789999
Q ss_pred eeeeeeecc--CCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEEEE
Q 022975 176 FSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (289)
Q Consensus 176 fSfP~~q~~--~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~igl 249 (289)
++.|++... ...+.+...+ ..+..+.++.+.|++.| ++| +.+.||+.+..+++.+. +.+..+.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l 129 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLDSCLYI 129 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred eceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 999997542 1113332211 12234589999999999 899 89999999999999883 56889999
Q ss_pred EEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 250 IlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
.+|||++++++.+.+.+.+.. .+|.|||.++.
T Consensus 130 ~~GtGiG~gii~~G~l~~G~~--agEiGh~~v~~ 161 (302)
T 3epq_A 130 TIGTGIGAGAIVEGRLLQGLS--HPEMGHIYIRR 161 (302)
T ss_dssp EESSSEEEEEEETTEECCSSS--CCCGGGCCCCC
T ss_pred EECCceEEEEEECCEEcccCC--CCccceEEEec
Confidence 999999999999988887764 47899999864
No 23
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.53 E-value=2e-14 Score=133.35 Aligned_cols=164 Identities=16% Similarity=0.209 Sum_probs=121.5
Q ss_pred cccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 022975 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (289)
Q Consensus 92 ~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (289)
...+++|+||+|||++|++++++.|+ ++.. ..++.|.. .+.+++++.|++.|.++++. . .+...
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~--~~~~~~~~---~~~~~~~~~i~~~i~~~~~~-~-------~~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNA--TRFMTADW---VNGIGFVESMKLEIGNFLKQ-Y-------PIVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEE--EEEEHHHH---HTTTCHHHHHHHHHHHHHHH-C-------TTCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEE--EEEeCCCC---CCHHHHHHHHHHHHHHHHhc-c-------CCeeE
Confidence 35678999999999999999999876 3432 23333321 35678999999999999872 1 24678
Q ss_pred eeeeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc----CCCcEE
Q 022975 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIA 247 (289)
Q Consensus 172 lG~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----~~~~~i 247 (289)
+|++++.|++.. .+.+...+ ++++..+.++.+.|++.+. ++| +.+.||+.+..+++.+. +.+..+
T Consensus 80 igi~~pG~vd~~---~g~v~~~~---~l~~w~~~~l~~~l~~~~~--~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v 148 (321)
T 3r8e_A 80 VGIGWPGLVSLD---RTKVILLP---NIPSVVNVPIVEILRSEFP--HIH---FKIENDAKCAALGEYYFGENKRMQTFI 148 (321)
T ss_dssp EEEEESSEECTT---SCCEEEBT---TBCCCCSCCHHHHHHHHCT--TSE---EEEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred EEEEecccEECC---CCEEEeCC---CCccccCCCHHHHHHHHcC--CCC---EEEEchHHHHHHHHHHhCCCCCCCcEE
Confidence 899999998632 23332211 1112234889999888662 566 89999999999999873 568899
Q ss_pred EEEEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 248 AVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 248 glIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
.+++|||++++++.+.+.+.+..+.++|.|||. +.
T Consensus 149 ~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~-~~ 183 (321)
T 3r8e_A 149 LLALGTGVGSGVMMNGKLFIGGRGNGTEVGHML-TT 183 (321)
T ss_dssp EEEESSSEEEEEEETTEECCCTTSCCCCGGGCB-CT
T ss_pred EEEECCceEEEEEECCEEecCCCCCCccccccc-CC
Confidence 999999999999999999998888888999998 64
No 24
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.46 E-value=1.1e-13 Score=126.04 Aligned_cols=152 Identities=19% Similarity=0.273 Sum_probs=109.9
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
.+|+||+|||++|++++++.|+ ++.. ..++.| .+.+++++.|.+.+.+ . +...+|++
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~--~~~~~~-----~~~~~~~~~i~~~i~~------~-------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDK--TSISTP-----ENLEDLLAWLDQRLSE------Q-------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEE--EEECCC-----SSHHHHHHHHHHHHTT------S-------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEE--EEEeCC-----CCHHHHHHHHHHHHHh------C-------CCcEEEEE
Confidence 4899999999999999999875 3432 233333 2355666666554443 1 35678999
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccc--cCCCcEEEEEEcc
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAAVILGT 253 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y--~~~~~~iglIlGT 253 (289)
++.|++... +.+.. .. +++...+.++.+.| +.+ ++| +.+.||+.+.++++.+ .+.+..+.+++||
T Consensus 62 ~pG~vd~~~---g~v~~-~~--~~~~~~~~~l~~~l-~~~---~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~Gt 128 (292)
T 2gup_A 62 VPGAVNQET---GVIDG-FS--AVPYIHGFSWYEAL-SSY---QLP---VHLENDANCVGLSELLAHPELENAACVVIGT 128 (292)
T ss_dssp ESSEECTTT---CBEES-CC--SSGGGSSSBHHHHT-GGG---CCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEESS
T ss_pred ecCcccCCC---CEEEe-cC--CCCcccCCCHHHHH-HHc---CCC---EEEechHHHHHHHHHHhcCCCCeEEEEEECC
Confidence 999986421 22221 11 11111247888888 777 888 8899999999999876 4567899999999
Q ss_pred CccceeeecccccCcccCCCCCCCceEEEc
Q 022975 254 GTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 254 G~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
|++++++.+.+.+.+..+.++|.|||.++.
T Consensus 129 GiG~giv~~G~l~~G~~g~aGEiGh~~~~~ 158 (292)
T 2gup_A 129 GIGGAMIINGRLHRGRHGLGGEFGYMTTLA 158 (292)
T ss_dssp SEEEEEEETTEEECCTTSCTTCGGGCBSSC
T ss_pred ceEEEEEECCEEEecCCCCCccceeEEecc
Confidence 999999999998888888788999999864
No 25
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.38 E-value=7.5e-13 Score=123.22 Aligned_cols=149 Identities=17% Similarity=0.246 Sum_probs=102.3
Q ss_pred cccEEEEeeCCceEEEEEEEe-CCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 94 KGLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l-~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
.+++|++|+|||++|++++++ +|+ +.. ..++|... .+.+. +.+.+++++.+. +...+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~----~~~~~~~~----~~~~~----~~i~~~~~~~~~-------~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQ----AKTYSGLD----YPSLE----AVIRVYLEEHKV-------EVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEE----EEEEEGGG----CSCHH----HHHHHHHHHSCC-------CCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEE----EEEecCCC----cCCHH----HHHHHHHHhcCC-------CccEE
Confidence 467999999999999999997 454 332 22334321 12333 444556655431 35678
Q ss_pred eeeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhccccc-----------
Q 022975 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----------- 241 (289)
Q Consensus 173 G~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~----------- 241 (289)
|++++.|++.......++ .|. .+ .+.|++.| ++| .+.+.||+.+..+++.+.
T Consensus 71 gi~~pG~vd~~~~~~~nl-~w~----------~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g 133 (332)
T 1sz2_A 71 CIAIACPITGDWVAMTNH-TWA----------FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGGA 133 (332)
T ss_dssp EEEESSCCCSSEECCSSS-CCC----------EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSSC
T ss_pred EEEEeCceeCCEEeeeCC-CCc----------CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCCC
Confidence 999999996321111111 342 35 57888888 776 268999999999999863
Q ss_pred ---CCCcEEEEEEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 242 ---NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 242 ---~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
+.+..+.+++|||++++++.+.+ .++.+.++|.|||.+..
T Consensus 134 ~~~~~~~~~~v~~GTGiG~giv~~g~--~G~~g~agE~GH~~v~~ 176 (332)
T 1sz2_A 134 EPVEGKPIAVYGAGTGLGVAHLVHVD--KRWVSLPGEGGHVDFAP 176 (332)
T ss_dssp CCCTTCCEEEEEESSSEEEEEEEEET--TEEEEEECCGGGSBCCC
T ss_pred CCCCCCcEEEEEcCccceEEEEecCC--CCeeeCCCCccccCcCC
Confidence 34678999999999999999876 66666677999998864
No 26
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.36 E-value=6.6e-13 Score=125.48 Aligned_cols=157 Identities=14% Similarity=0.121 Sum_probs=109.5
Q ss_pred cccEEEEeeCCceEEEEEEEe----CCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 022975 94 KGLFYALDLGGTNFRVLRVQL----GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l----~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (289)
..++|++|+|||++|++++++ .|+ ++... + ..|. .+.+++++.|++.+.++..... .+.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~---il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVH---ACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM-------KRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEE---EEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCcc---EEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc-------ccc
Confidence 357899999999999999999 553 34321 1 1343 2467888888888877654321 235
Q ss_pred eeeeeeeeeeeeeccCCceEEEecccceeccCCCCC-cHHHHHHHHHHHcCC-CceEEEEEechHHHhhc----------
Q 022975 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGL-DMRVAALVNDTIGTLAG---------- 237 (289)
Q Consensus 170 ~~lG~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~-dv~~~L~~al~r~~l-~v~v~aivNDtvatlla---------- 237 (289)
..+|++++.|++...+... +..|. +. ++.+++++.+ ++ | +.+.||+.+..++
T Consensus 91 ~gigi~~pG~vd~g~v~~~-~~~~~---------~~~~l~~~l~~~~---~~~p---v~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 91 KAGVINVPGPVTGGAVGGP-FNNLK---------GIARLSDYPKALF---PPGH---SAILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEESSCEETTTEECC-CSSSB---------SCEEGGGSCTTTS---CTTS---EEEEEHHHHHHHHHHHHHHTTCH
T ss_pred cEEEEEeeccccCCEEecc-CCCCC---------CcCCHHHHHHHhc---CCCC---EEEEccHhHHhccccccChhhhc
Confidence 7788999999876111111 33454 23 6666666555 66 7 8999999999999
Q ss_pred -----cccc----------------CCCcEEEEEEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 238 -----GRYH----------------NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 238 -----~~y~----------------~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
+.+. +.+..+.+++|||++++++.+.+.+.+..+.++|.|||.++.
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~G~~~~aGE~Gh~~~~~ 221 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLPM 221 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCCC
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccCCCcccccccceeecCC
Confidence 4543 347889999999999999999888877776677899999874
No 27
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.29 E-value=6.1e-12 Score=112.12 Aligned_cols=139 Identities=21% Similarity=0.261 Sum_probs=95.3
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
+.+.+|++|+|||++|+ ++++|+ +. .+.+.|. ..+.+++.+.|++.+ ++. +...+
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~~----~~~~t~~---~~~~~~~~~~i~~~i----~~~---------~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---EE----RKVESGK---TMTGPEMVAAVTAMA----KDM---------TYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---CE----EEEECCT---TCCHHHHHHHHHHHT----TTC---------CCSEE
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---EE----EEEECCC---CCCHHHHHHHHHHHH----HhC---------CCCEE
Confidence 35689999999999994 666654 21 1233332 134566666665543 322 24678
Q ss_pred eeeeeeeeeecc-CC-ceEE-EecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEE
Q 022975 173 GFTFSFPVRQTS-IA-SGDL-IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAV 249 (289)
Q Consensus 173 G~tfSfP~~q~~-~~-~~~L-i~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~igl 249 (289)
|++++.|++..+ +. ..++ ..|. +.++. +.| ++| +.+.||+.+..+++.+. ...+.+
T Consensus 59 gi~~pG~Vd~~~~~~~~~nl~~~w~---------~~~l~----~~~---~~p---v~v~NDanaaalge~~~--~~~~~l 117 (226)
T 3lm2_A 59 AMGYPGPVVHNKPLREPVNLGEGWV---------GYDYE----GAF---GRP---VRIVNDALMQAIGSYNG--GRMLFL 117 (226)
T ss_dssp EEEESSCEETTEECSCCTTSCSCCT---------TCCHH----HHH---TSC---EEEEEHHHHHHHHHCCS--SEEEEE
T ss_pred EEEEEeEEECCeEEEECCcCCcccc---------CCchH----Hhc---CCe---EEEEEHHHHHHHHHhhc--CcEEEE
Confidence 999999997532 11 1122 1343 46653 445 888 89999999999999876 688999
Q ss_pred EEccCccceeeecccccCcccCCCCCCCceEEEc
Q 022975 250 ILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 250 IlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
.+|||.+++++.+.+.++ +|.|||.++.
T Consensus 118 ~~GtGiG~gii~~G~l~~------GEiGH~~v~~ 145 (226)
T 3lm2_A 118 GLGTGLGAAMIVENVAQP------MEIAHLPYRK 145 (226)
T ss_dssp EESSSEEEEEEETTEEEE------ECCTTSEEET
T ss_pred EeCCceEEEEEECCEEee------eeeeeEEecC
Confidence 999999999999877654 5889999875
No 28
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.26 E-value=1.7e-11 Score=113.95 Aligned_cols=131 Identities=20% Similarity=0.259 Sum_probs=95.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecC-CCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCC-Ceeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIP-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPG-RQRELG 173 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~-~~~~lG 173 (289)
++|+||+|||++|+++++++|+ ++. ...++ ......+.+++++.|++.|.+++++.+... . +...+|
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~----~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILA----EADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP----LVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEE----EEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT----TCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEE----EEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCc----ccceeEEE
Confidence 6899999999999999999876 342 22232 222112568899999999999998865432 2 456788
Q ss_pred eeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEcc
Q 022975 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (289)
Q Consensus 174 ~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGT 253 (289)
++.+.|++.. + +.++.+.|++.+...++| +.+.||+.+.+++ .+ .+..+.+++||
T Consensus 76 i~~pG~vd~~--------~-----------~~~l~~~l~~~~~~~~~p---v~v~NDa~aaa~a-~~--~~~~v~v~~GT 130 (347)
T 2ch5_A 76 LSLSGGDQED--------A-----------GRILIEELRDRFPYLSES---YLITTDAAGSIAT-AT--PDGGVVLISGT 130 (347)
T ss_dssp EEETTTTCHH--------H-----------HHHHHHHHHHHCTTSBSC---EEEEEHHHHHHHH-HC--SSCEEEEEESS
T ss_pred EeccCCCchH--------H-----------HHHHHHHHHHhcCCCCce---EEEECcHHHHHHh-hC--CCCcEEEEEcC
Confidence 8888888653 1 246777777766111267 8999999999999 44 36788999999
Q ss_pred Cccceeeec
Q 022975 254 GTNAAYVER 262 (289)
Q Consensus 254 G~Na~yie~ 262 (289)
|++++++.+
T Consensus 131 Gig~~~v~~ 139 (347)
T 2ch5_A 131 GSNCRLINP 139 (347)
T ss_dssp SEEEEEECT
T ss_pred CceeEEEcC
Confidence 999998864
No 29
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.07 E-value=7.1e-11 Score=112.39 Aligned_cols=164 Identities=15% Similarity=0.209 Sum_probs=105.0
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHH---HHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI---AAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~I---a~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
++|+||+|||++|+++++++ + ++.. ...+.+.... .+.+++++.+ .+.|.+++++.+... .+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~-~---il~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~~----~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE-R---MVKM--QNFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYSL----SSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT-E---EEEE--EEEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCCG----GGCSEE
T ss_pred eEEEEECCccceeEEEEecc-h---heee--eecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCCc----cCceEE
Confidence 58999999999999999863 2 3432 2333332100 0223455556 888888887664321 234455
Q ss_pred eeeeeeeeeeccCCceEEE-----------ecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechH---------
Q 022975 173 GFTFSFPVRQTSIASGDLI-----------KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTI--------- 232 (289)
Q Consensus 173 G~tfSfP~~q~~~~~~~Li-----------~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtv--------- 232 (289)
++++.|++.. .+.+. .+.+-...++. +.++.+.|++.+ ++| +.+.||+.
T Consensus 72 -i~~pG~vd~~---~G~~~~i~~~~~~~l~~~~~~~~~~nl-~~~l~~~l~~~~---~~P---v~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 72 -VSRGGLLDPI---PGGVYLVDGLMIKTLKSGKNGEHASNL-GAIIAHRFSSET---GVP---AYVVDPVVVDEMEDVAR 140 (381)
T ss_dssp -EEECCSCSCB---CSSEEECCHHHHHHHHHTTTCCCTTHH-HHHHHHHHHHHH---CCC---EEEESCTTBCCCCGGGT
T ss_pred -EecCCCCCCC---CCceEecCHHHHHHHHhcccccChhhh-hHHHHHHHHHhc---CCC---EEEeCCCccccCcHHHH
Confidence 6777777532 12221 00000011111 456777788877 899 57999998
Q ss_pred HHhh-----------------cc-cc----cCCC--cEEEEEEccCccceeeecccccCcccCCCCCCCceEEE
Q 022975 233 GTLA-----------------GG-RY----HNKD--AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVSK 282 (289)
Q Consensus 233 atll-----------------a~-~y----~~~~--~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~~~miIN 282 (289)
+..+ ++ .+ .+.+ ..+.+.+|||+++|.+.+.+.+.+..+..+| |||.++
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~ 213 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPE 213 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSS
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeec
Confidence 7777 66 33 2334 8899999999999999999888777666678 999876
No 30
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.05 E-value=6e-10 Score=101.72 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=90.5
Q ss_pred EEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
+|+||+|||++|+++++ +|+ ++. +...|. .....+.+++++.|.+.+.+.+.. .. .+...+|++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~----~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---~~----~~i~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLG----RFQTSGINPFQQDRNEIDTALRSEVLPAIGQ---KA----SSIRAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEE----EEEEECCCTTTSCHHHHHHHHTTTTHHHHTT---ST----TTCCEEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEE----EEECCCCCcccCCHHHHHHHHHHHHHHHhCC---Cc----ccccEEEEE
Confidence 79999999999999999 764 342 222322 222235678888888888776421 11 234567777
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEccCc
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~ 255 (289)
.+.+. . ..+ .++.+.|++.+ +.. ..+.|.||+.+.++++. ..+..+.+|+|||+
T Consensus 67 ~pG~~-~---~~~----------------~~l~~~l~~~~---~~~-~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 67 GAGCT-P---AKA----------------PMLNEALDSML---PHC-DRIEVAGDMLGAARALC--GDSEGIACILGTGS 120 (291)
T ss_dssp ETTCC-T---TTH----------------HHHHHHHHHHS---TTC-SEEEEECHHHHHHHHHT--TTSCEEEEEESSSE
T ss_pred CCCCC-h---HHH----------------HHHHHHHHHhc---CCC-CcEEEeCcHHHHHHhhc--CCCCcEEEEecCCh
Confidence 77765 1 111 25677777666 530 13899999999999974 55778999999999
Q ss_pred cceee-ecccccCcccCCCCCCCceEEE
Q 022975 256 NAAYV-ERAHAIPKWHGLLPKSGEMVSK 282 (289)
Q Consensus 256 Na~yi-e~~~~i~k~~~~~~~~~~miIN 282 (289)
+++.+ .+.+.. ..++.|||+.+
T Consensus 121 gg~~i~~~G~~~-----~aGe~G~~~~d 143 (291)
T 1zbs_A 121 NSCLFDGREIKA-----NVSPLGYILGD 143 (291)
T ss_dssp EEEEECSSSEEE-----ECCCCHHHHCC
T ss_pred heEEECCCCcEE-----EeCCCccccCC
Confidence 75554 454432 12445555544
No 31
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=99.03 E-value=1.1e-09 Score=100.33 Aligned_cols=141 Identities=16% Similarity=0.082 Sum_probs=92.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec-CCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCe--eee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-PPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ--REL 172 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I-p~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~--~~l 172 (289)
++|+||+|||++|+++++++|+ ++.. ... |.... .+.+++++.+++.|.+++++.+... ++. ..+
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~----~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~----~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAM----AEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPA----APASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEE----EEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCC----CCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEE----EeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCCh----hhhccceE
Confidence 6899999999999999999875 3421 222 22222 3567899999999999998765432 232 467
Q ss_pred eeeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEc
Q 022975 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILG 252 (289)
Q Consensus 173 G~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlG 252 (289)
|++++.|++... |. + |++.|.+ ++| +.+.||+.+.++++. . .+..+.+++|
T Consensus 80 gig~pG~v~~~~--------~~-----------~----l~~~~~~-~~p---v~v~NDa~aaa~ge~-~-~~~~v~v~~G 130 (305)
T 1zc6_A 80 GLGLSGVHNRQW--------AG-----------E----FESQAPG-FAR---LSLATDGYTTLLGAH-G-GQPGIIVALG 130 (305)
T ss_dssp EEEESCCCTTSH--------HH-----------H----HHHTCCC-CSE---EEEECHHHHHHHHHT-T-TSSEEEEEES
T ss_pred EEEecCCCchHH--------HH-----------H----HHHhCCC-Cce---EEEECCHHHHHHhhc-C-CCCeEEEEec
Confidence 888888875422 42 0 3332211 345 899999999998873 2 4667889999
Q ss_pred cCccceeee-cccccCcccCCCCCCCceEEE
Q 022975 253 TGTNAAYVE-RAHAIPKWHGLLPKSGEMVSK 282 (289)
Q Consensus 253 TG~Na~yie-~~~~i~k~~~~~~~~~~miIN 282 (289)
||++++.+. +.... ..++.|||.++
T Consensus 131 TGigg~~i~~~G~~~-----~aGe~Gh~~~d 156 (305)
T 1zc6_A 131 TGSIGEALYPDGSHR-----EAGGWGYPSGD 156 (305)
T ss_dssp SSEEEEEECTTSCEE-----EESCCCTTTSC
T ss_pred CCeEEEEEeCCCcEE-----EecCcccccCC
Confidence 999655554 44321 12355666554
No 32
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.02 E-value=1.5e-10 Score=105.64 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=80.7
Q ss_pred EEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
||+||+|||++|+++++ +|+ ++. +...|. .....+.+++++.|.+.+.+.+.. .+...+|++
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~----~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---------~~i~~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIK----RLGTKGINPFFQSEEEIQQKLTASLLPQLPE---------GKFNAVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEE----EEEECCCCTTTSCSTTTTTTTTC----------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEE----EEECCCCCcccCCHHHHHHHHHHHHHHhcCc---------ccccEEEEE
Confidence 78999999999999998 775 342 222333 221124566777777777665421 123456777
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcC--CCceEEEEEechHHHhhcccccCCCcEEEEEEcc
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG--LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~--l~v~v~aivNDtvatlla~~y~~~~~~iglIlGT 253 (289)
++.+. .. . +.++.+.|++.+ + .| +.|.||+.+.++++. ..+..+.+|+||
T Consensus 65 ~pG~~-~~---~----------------~~~l~~~l~~~~---~~~~p---v~v~NDa~~aalge~--g~~~~v~v~~GT 116 (291)
T 1zxo_A 65 GAGCT-PE---K----------------APVLRRAIADSL---PVIGN---IKANSDMLAAAHGLC--GQKAGIACILGT 116 (291)
T ss_dssp CTTCC-TT---T----------------THHHHHHHHHHS---CCCSC---CEEECSHHHHHHHTT--TTSCBEEEEESS
T ss_pred cCCCC-HH---H----------------HHHHHHHHHHhc---CCCce---EEEECcHHHHHHhhc--CCCCcEEEEeCC
Confidence 77665 11 0 125677777766 6 36 799999999999985 556779999999
Q ss_pred Ccc-ceeeecccccCcccCCCCCCCceEEE
Q 022975 254 GTN-AAYVERAHAIPKWHGLLPKSGEMVSK 282 (289)
Q Consensus 254 G~N-a~yie~~~~i~k~~~~~~~~~~miIN 282 (289)
|++ ++++.+.+... .++.|||+.+
T Consensus 117 Gi~g~gi~~~G~~~~-----aGe~Gh~~~d 141 (291)
T 1zxo_A 117 GSNSCFYNGKEIVSN-----ISPLGFILGD 141 (291)
T ss_dssp SEEEEEECSSSEEEE-----CCCCCTTTSC
T ss_pred ChheEEECCCCcEEE-----eCCCccccCC
Confidence 996 66665544321 2455666554
No 33
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.02 E-value=1.6e-10 Score=105.40 Aligned_cols=139 Identities=15% Similarity=0.104 Sum_probs=94.2
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeeeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (289)
++|+||+|||++|+++++++|+ ++.. ..++.|. ....+.+++++.|.+.+.+++++. ...+|++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~--~~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGE--GSSGPGN-YHNVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEE--EEESCCC-HHHHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEE--EeCCCCC-cccCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 5899999999999999999875 3422 2233322 101256789999999999887532 2457777
Q ss_pred eeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEccCc
Q 022975 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (289)
Q Consensus 176 fSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~ 255 (289)
++.| +... +. .++.+.|++ + ++| +.+.||+.+..+++.+ .+..+.+++|||.
T Consensus 67 ~~G~-~~~~---~~---------------~~l~~~l~~-~---~~p---v~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSKF---DW---------------ENFTPLASL-I---APK---VIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSHH---HH---------------HHHHHHHTT-S---SSE---EEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred cCCC-Cchh---HH---------------HHHHHHHHh-C---CCC---EEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 7777 4321 11 345666665 5 566 7899999999999876 4678899999994
Q ss_pred cceeeecccccCcccCCCCCCCceEEEc
Q 022975 256 NAAYVERAHAIPKWHGLLPKSGEMVSKL 283 (289)
Q Consensus 256 Na~yie~~~~i~k~~~~~~~~~~miIN~ 283 (289)
++ ... +.+..+.+++.|||.++.
T Consensus 119 ---i~-~g~-~~G~~~~aGE~Gh~~~~~ 141 (299)
T 2e2o_A 119 ---VV-EGY-NGKEFLRVGGRGWLLSDD 141 (299)
T ss_dssp ---EE-EEE-CSSCEEEEECSCTTTCCT
T ss_pred ---EE-EEE-cCCeEEecCCcCCCcCCC
Confidence 22 222 444444456788888763
No 34
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=97.64 E-value=0.00016 Score=70.91 Aligned_cols=96 Identities=20% Similarity=0.186 Sum_probs=61.9
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (289)
+..++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++++.+++.+.+. .++
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I 77 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRLPDT---VVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESD----WRP 77 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGG----CCE
T ss_pred cCCEEEEEEecCcceEEEEECCCCC---EEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCCh----hhe
Confidence 3458999999999999999998775 44433333322 11 11224678999999999999998765432 356
Q ss_pred eeeeeeeee----eeeeccCCceEEEeccc
Q 022975 170 RELGFTFSF----PVRQTSIASGDLIKWTK 195 (289)
Q Consensus 170 ~~lG~tfSf----P~~q~~~~~~~Li~wtK 195 (289)
..+|++-.. |++..+.--...+.|..
T Consensus 78 ~~Igis~~~~~~v~~D~~G~~l~~~i~W~D 107 (508)
T 3ifr_A 78 GGICVTGMLPAVVLLDDRGAVLRPSIQQSD 107 (508)
T ss_dssp EEEEEEECSSCBEEECTTSCBCSCEECTTC
T ss_pred EEEEEECCCCcEEEECCCCCCcccceeccc
Confidence 667777666 67655521122346764
No 35
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.51 E-value=0.00035 Score=68.54 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=60.8
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (289)
|..++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++++.+++.+... .++
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I 73 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQI 73 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGE
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hhe
Confidence 5668999999999999999998776 44433333321 21 11224678999999999999998765432 245
Q ss_pred eeeeeeeee----eeeec-cCCceEEEeccc
Q 022975 170 RELGFTFSF----PVRQT-SIASGDLIKWTK 195 (289)
Q Consensus 170 ~~lG~tfSf----P~~q~-~~~~~~Li~wtK 195 (289)
..+|++... |++.. +.--...+.|..
T Consensus 74 ~~Igis~~~~~~v~~D~~~G~~l~~~i~W~D 104 (510)
T 2p3r_A 74 AAIGITNQRETTIVWEKETGKPIYNAIVWQC 104 (510)
T ss_dssp EEEEEEECSSCBEEEETTTCCBSSCEECTTC
T ss_pred EEEEEeCCcCcEEEEECCCCeECcccccccC
Confidence 556665542 56553 422122345753
No 36
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=97.48 E-value=0.00038 Score=68.49 Aligned_cols=94 Identities=16% Similarity=0.246 Sum_probs=60.9
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (289)
.++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.++|++.+++.+... .++..
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I~~ 98 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITA----NDIAA 98 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred CeEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 47899999999999999998776 44433333321 21 11224678999999999999998765432 34566
Q ss_pred eeeeeee----eee-eccCCceEEEeccc
Q 022975 172 LGFTFSF----PVR-QTSIASGDLIKWTK 195 (289)
Q Consensus 172 lG~tfSf----P~~-q~~~~~~~Li~wtK 195 (289)
+|++... |++ .++.--...+.|..
T Consensus 99 Igis~~g~~~v~~D~~~G~~l~~~i~W~D 127 (520)
T 4e1j_A 99 IGITNQRETVVVWDRETGKPIHNAIVWQD 127 (520)
T ss_dssp EEEEECSSCEEEEETTTCCBSSCEECTTC
T ss_pred EEEeCCcceEEEEECCCCeECcccccccc
Confidence 6766655 666 45522122345754
No 37
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=97.39 E-value=0.00077 Score=65.95 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=59.6
Q ss_pred cccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCee
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (289)
..++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++++.+++.+... .++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I~ 76 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRP----EAIA 76 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hheE
Confidence 457999999999999999998876 44433333321 21 12224678999999999999998765432 2445
Q ss_pred eeeeeee----eeeeec-cCCceEEEeccc
Q 022975 171 ELGFTFS----FPVRQT-SIASGDLIKWTK 195 (289)
Q Consensus 171 ~lG~tfS----fP~~q~-~~~~~~Li~wtK 195 (289)
.+|++-. .+++.. +.--...+.|..
T Consensus 77 ~Igis~~~~~~v~~D~~~G~~l~~~i~w~D 106 (506)
T 3h3n_X 77 GIGITNQRETTVVWDKTTGQPIANAIVWQS 106 (506)
T ss_dssp EEEEEECSSCBEEEETTTCCBSSCEECTTC
T ss_pred EEEeeCCcccEEEEeCCCCeECCCceEecC
Confidence 5555432 356653 422223345754
No 38
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=97.38 E-value=0.00061 Score=66.53 Aligned_cols=94 Identities=14% Similarity=0.218 Sum_probs=59.4
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (289)
.++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++++.+++.+... .++..
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 78 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRA----DQIAG 78 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred cEEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 37899999999999999998776 44433333321 11 11224678999999999999998765432 24555
Q ss_pred eeeeee----eeeeec-cCCceEEEeccc
Q 022975 172 LGFTFS----FPVRQT-SIASGDLIKWTK 195 (289)
Q Consensus 172 lG~tfS----fP~~q~-~~~~~~Li~wtK 195 (289)
+|++-. .|++.. +.--...+.|..
T Consensus 79 Igis~~~~~~v~~D~~~G~~l~~~i~w~D 107 (501)
T 3g25_A 79 IGITNQRETTVVWDKHTGRPIYHAIVWQS 107 (501)
T ss_dssp EEEEECSSCEEEEETTTCCBSSCEECTTC
T ss_pred EEEECCcCcEEEEECCCCeECCCceeecc
Confidence 555543 466654 422223345754
No 39
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=97.32 E-value=0.00075 Score=65.75 Aligned_cols=81 Identities=23% Similarity=0.276 Sum_probs=54.4
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
++|+||+|||++|+++++.+|+ ++...+..++. |. .....+.+++++.+.++|++.+++.+... .++..+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEA----GEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 5899999999999999998775 44333223321 21 11223678999999999999998765432 245666
Q ss_pred eeeee----eeeeec
Q 022975 173 GFTFS----FPVRQT 183 (289)
Q Consensus 173 G~tfS----fP~~q~ 183 (289)
|++.. .|++..
T Consensus 76 gis~~~~~~~~vD~~ 90 (495)
T 2dpn_A 76 GITNQRETTLLWDRK 90 (495)
T ss_dssp EEEECSSCBEEEETT
T ss_pred EEeCCCccEEEEECC
Confidence 76666 467654
No 40
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=97.28 E-value=0.001 Score=64.85 Aligned_cols=81 Identities=7% Similarity=-0.034 Sum_probs=53.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhc--CCCCCCCCCCee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATE--GEGFHVSPGRQR 170 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~--~~~~~~~~~~~~ 170 (289)
++|+||+|||++|+++++.+|+ ++...+..++. |. .....+.+++++.+.++|.+.+++. +... .++.
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~----~~i~ 77 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTS----VIIK 77 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSS----CEEE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCc----cceE
Confidence 5899999999999999998775 44333333321 11 1112367899999999999998874 3321 2456
Q ss_pred eeeeeee----eeeeec
Q 022975 171 ELGFTFS----FPVRQT 183 (289)
Q Consensus 171 ~lG~tfS----fP~~q~ 183 (289)
.+|++.. .|++..
T Consensus 78 ~Igis~~~~~~~~~D~~ 94 (503)
T 2w40_A 78 CIGITNQRETVIIWDRI 94 (503)
T ss_dssp EEEEEECSSCEEEEETT
T ss_pred EEEEcCCcceEEEEECC
Confidence 6666666 466654
No 41
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.24 E-value=0.00062 Score=66.94 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=53.7
Q ss_pred cccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 022975 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGR 168 (289)
Q Consensus 92 ~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~ 168 (289)
+|+.+|||||+|.|+.|+++++.+|+ ++...+..++. |. .....+.+++++-+.++|++.+++.+.+. ++
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~----~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hh
Confidence 47889999999999999999988776 44433333332 21 12223678999999999999999876543 35
Q ss_pred eeeeeee
Q 022975 169 QRELGFT 175 (289)
Q Consensus 169 ~~~lG~t 175 (289)
+..+||+
T Consensus 74 I~aIgis 80 (526)
T 3ezw_A 74 IAAIGIT 80 (526)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6666665
No 42
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=97.21 E-value=0.0012 Score=64.53 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=54.3
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++.+.+++.+... .++..+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTH----EDIAAV 75 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGEEEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCc----ccEEEE
Confidence 5899999999999999998775 44333233321 11 11123678899999999999998765432 245666
Q ss_pred eeeeee----eeeec
Q 022975 173 GFTFSF----PVRQT 183 (289)
Q Consensus 173 G~tfSf----P~~q~ 183 (289)
|++... |++..
T Consensus 76 gis~~g~~~v~vD~~ 90 (504)
T 2d4w_A 76 GITNQRETAVVWDKT 90 (504)
T ss_dssp EEEECSSCBEEEETT
T ss_pred EEeCCCCeEEEEECC
Confidence 666664 66644
No 43
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=97.20 E-value=0.0012 Score=64.05 Aligned_cols=80 Identities=15% Similarity=0.290 Sum_probs=53.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
.|||||+|||++|+++++.+|+ ++...+..+++ |+ .....+.+++++.+.+++++.+++... +++..+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~------~~i~~I 71 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCC------TTCCEE
T ss_pred CEEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCCc------cceEEE
Confidence 3799999999999999988775 44433223321 11 112236789999999999999876421 245667
Q ss_pred eeeeee----eeeecc
Q 022975 173 GFTFSF----PVRQTS 184 (289)
Q Consensus 173 G~tfSf----P~~q~~ 184 (289)
|++... +++..+
T Consensus 72 gis~~~~~~v~~D~~G 87 (484)
T 2itm_A 72 GIAGQMHGATLLDAQQ 87 (484)
T ss_dssp EEEECSSCBEEECTTC
T ss_pred EEcCCcCcEEEECCCc
Confidence 777666 665544
No 44
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=97.20 E-value=0.0012 Score=64.43 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=57.7
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
++|+||+|||++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++++.+++.+... .++..+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~i~~I 76 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEP----NQIAAI 76 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999988775 44433333321 11 11223678999999999999998765432 245556
Q ss_pred eeeeee----eeeeccCCceEEEecc
Q 022975 173 GFTFSF----PVRQTSIASGDLIKWT 194 (289)
Q Consensus 173 G~tfSf----P~~q~~~~~~~Li~wt 194 (289)
|++... +++.++.--...+.|.
T Consensus 77 gis~~~~~~v~~D~~G~~l~~~i~w~ 102 (497)
T 2zf5_O 77 GVTNQRETTLVWDKDGKPLYNAIVWQ 102 (497)
T ss_dssp EEEECSSCEEEECTTCCBSSCEECTT
T ss_pred EEecCCCcEEEECCCCCCcccceeec
Confidence 666554 5555442112234574
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=97.06 E-value=0.0014 Score=64.72 Aligned_cols=74 Identities=24% Similarity=0.388 Sum_probs=50.7
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--C-CCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (289)
.++|+||+|+|++|+++++.+|+ ++...+..+++ | +.....+.+++++.+.++|++.+++.+... .++..
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 77 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINP----IQVKG 77 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEE
T ss_pred cEEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCH----hHEEE
Confidence 47999999999999999998776 44333223221 1 112234678999999999999998765432 24555
Q ss_pred eeee
Q 022975 172 LGFT 175 (289)
Q Consensus 172 lG~t 175 (289)
+|++
T Consensus 78 Igis 81 (554)
T 3l0q_A 78 LGFD 81 (554)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5554
No 46
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.91 E-value=0.0024 Score=62.59 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=49.2
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeee
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (289)
.++|+||+|+|+.|+++++.+|+ ++...+..+++ |. .....+.+++++.+.+++++.+ +.+... .++..
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~----~~I~~ 76 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDA----RRVSA 76 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCG----GGEEE
T ss_pred cEEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCCh----hHeEE
Confidence 36999999999999999998775 44433333322 21 1223467899999999999998 543321 24555
Q ss_pred eeeee
Q 022975 172 LGFTF 176 (289)
Q Consensus 172 lG~tf 176 (289)
+|++-
T Consensus 77 Igis~ 81 (511)
T 3hz6_A 77 IVLSG 81 (511)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 55553
No 47
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.88 E-value=0.0023 Score=63.48 Aligned_cols=75 Identities=12% Similarity=0.246 Sum_probs=49.6
Q ss_pred ccEEEEeeCCceEEEEEEEe-CCCcceeEEeeeEEee-------cC-------CCcccCCchhHHHHHHHHHHHHHHhcC
Q 022975 95 GLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVS-------IP-------PHLMTGSSHELFDYIAAALAKFVATEG 159 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l-~g~~~~~~~~~~~~~~-------Ip-------~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (289)
.+|||||+|+|+.|+++++. +|+ ++...+..++ .| ......+.+++++.+.++|++.+++.+
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred CEEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 47999999999999999998 776 4444433443 12 122223567899999999999998765
Q ss_pred CCCCCCCCCeeeeeeee
Q 022975 160 EGFHVSPGRQRELGFTF 176 (289)
Q Consensus 160 ~~~~~~~~~~~~lG~tf 176 (289)
... .++..+|++.
T Consensus 82 ~~~----~~I~~Igis~ 94 (572)
T 3jvp_A 82 VDA----DDVIGIGVDF 94 (572)
T ss_dssp -CC----SCEEEEEEEE
T ss_pred CCh----hHEEEEEEec
Confidence 432 3455555554
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.86 E-value=0.0032 Score=61.49 Aligned_cols=62 Identities=11% Similarity=0.191 Sum_probs=44.5
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec--CC-CcccCCchhHHHHHHHHHHHHHHhcC
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (289)
.++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+.+++++.+.+++++.+++.+
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 68 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID 68 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS
T ss_pred CEEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC
Confidence 36899999999999999998775 44433333322 11 12224678999999999999987643
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=96.28 E-value=0.014 Score=56.45 Aligned_cols=81 Identities=20% Similarity=0.116 Sum_probs=50.3
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEE-----eecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCe
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEE-----VSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~-----~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (289)
..|||||+|+|++|+++++.+|+.-......... .+.|... ..+.+++++.+.+++++..... .++
T Consensus 4 ~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~-e~d~~~~~~~i~~~~~~~~~~~--------~~i 74 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYV-TWDVDSLESAIRLGLNKVCAAG--------IAI 74 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEE-ECCHHHHHHHHHHHHHHHHHTT--------CCC
T ss_pred ceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeE-EECHHHHHHHHHHHHHHHHhCC--------CCc
Confidence 3589999999999999999877532111111011 1111111 1356789999999888876521 135
Q ss_pred eeeeeee----eeeeeecc
Q 022975 170 RELGFTF----SFPVRQTS 184 (289)
Q Consensus 170 ~~lG~tf----SfP~~q~~ 184 (289)
..+|++. ..+++..+
T Consensus 75 ~~Igis~q~~~~v~~D~~G 93 (489)
T 2uyt_A 75 DSIGIDTWGVDFVLLDQQG 93 (489)
T ss_dssp CEEEEEECSSCEEEECTTS
T ss_pred eEEEEecCcccEEEECCCC
Confidence 6777777 77776544
No 50
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=96.10 E-value=0.013 Score=52.35 Aligned_cols=48 Identities=17% Similarity=0.353 Sum_probs=32.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHH
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~ 152 (289)
-+|+||+|+||+++++++ +++ +. ..|++++... .+.+++..++.+.+.
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~---l~----~~~r~~T~~~-~t~de~~~~l~~l~~ 51 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGK---TF----RRWRLSTGVF-QTEDELFSHLHPLLG 51 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSS---SC----EEEEEECCTT-CCHHHHHHHHHHHHG
T ss_pred eEEEEEECCCeEEEEEEE-CCE---EE----EEEEecCCCC-CCHHHHHHHHHHHHh
Confidence 479999999999999996 222 33 2566776543 466777777665443
No 51
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=95.74 E-value=0.013 Score=57.08 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=39.5
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeec-C-CCcccCCchhHHHHHHHHHHHHH
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-P-PHLMTGSSHELFDYIAAALAKFV 155 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~I-p-~~~~~~~~~~lfd~Ia~~I~~fl 155 (289)
.+||+||+|+|+.|+++++.+|+ ++...+..+++ | ......+.+++++.+.+++++.+
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLDGR---MLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp --CEEEEECSSEEEEEEECTTSC---EEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEcCCCCeEEEEEECCCc---EEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 36899999999999999987665 44433333322 1 11122467889999999998876
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.69 E-value=0.051 Score=53.22 Aligned_cols=86 Identities=13% Similarity=0.131 Sum_probs=53.1
Q ss_pred cccEEEEeeCCceEEEEEEE-eCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCeeee
Q 022975 94 KGLFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~-l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (289)
..++|+||+|+|+.|+++++ .+|+ ++... ..+.|.... .+.+++++.+.+++++. .. . .++..+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~---i~~~~--~~~~~g~~e-~d~~~~~~~i~~~l~~~----~~-~----~~I~~I 68 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE---LVRFG--QAKHPNGTS-VDPSYWWSAFQEAAEQA----GG-L----DDVSAL 68 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC---EEEEE--EEECCSSSE-ECTHHHHHHHHHHHHHT----TC-S----TTEEEE
T ss_pred CcEEEEEEeccccEEEEEEECCCCe---EEEEE--EEeCCCCce-ECHHHHHHHHHHHHHhc----CC-c----cCceEE
Confidence 34799999999999999999 6775 44433 233453332 46778888888777642 21 1 345666
Q ss_pred eeeeee----eeeeccCCceEEEecc
Q 022975 173 GFTFSF----PVRQTSIASGDLIKWT 194 (289)
Q Consensus 173 G~tfSf----P~~q~~~~~~~Li~wt 194 (289)
|++--- +++.++.--...+.|.
T Consensus 69 gis~q~~~~v~~D~~G~pl~~~i~W~ 94 (515)
T 3i8b_A 69 AVGGQQHGMVILDNQGNVIRDAMLWN 94 (515)
T ss_dssp EEEECSSCBEEECTTSCBCSCEECTT
T ss_pred EEeCCcceEEEECCCCCCcCCcceec
Confidence 666543 5665542222344564
No 53
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=94.88 E-value=0.064 Score=48.31 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=34.9
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCC
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~ 160 (289)
.+|+||+|+||+++++++- + .+. ..|++|+. . .+.+++. ..+.++++.++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~---~l~----~~~r~~T~-~-~t~de~~----~~l~~ll~~~~~ 53 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-D---EIK----LRFRHTSK-V-STSDELG----IFLKSVLRENNC 53 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-T---EEE----EEEEEECS-C-CCHHHHH----HHHHHHHHTTTC
T ss_pred eEEEEEECCCeEEEEEEEC-C---EEE----EEEEecCC-C-CCHHHHH----HHHHHHHHHcCC
Confidence 4799999999999999963 2 234 36778876 3 5666654 445556665543
No 54
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.52 E-value=2.2 Score=38.98 Aligned_cols=56 Identities=13% Similarity=0.128 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechHHHhhcccc--cC--CCcEEEEEEccCc-cceeeecc
Q 022975 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HN--KDAIAAVILGTGT-NAAYVERA 263 (289)
Q Consensus 206 dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y--~~--~~~~iglIlGTG~-Na~yie~~ 263 (289)
+..+.+.+++++.|++ +..++++..|+..+..+ .+ +...+-+=+|-|+ ..+.+...
T Consensus 151 ~~v~~~~~~~~~aGl~--~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g 211 (377)
T 2ych_A 151 EAVAGVLEALRGAGLV--PVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGD 211 (377)
T ss_dssp HHHHHHHHHHHHTTCE--EEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETT
T ss_pred HHHHHHHHHHHHCCCc--eEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECC
Confidence 4567788888888876 57899999988776432 21 3445556688888 66666553
No 55
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=93.33 E-value=0.15 Score=45.10 Aligned_cols=38 Identities=5% Similarity=0.090 Sum_probs=25.7
Q ss_pred EEEEechHHHhhcccccCCCcEEEEEEccCc-cceeeec
Q 022975 225 AALVNDTIGTLAGGRYHNKDAIAAVILGTGT-NAAYVER 262 (289)
Q Consensus 225 ~aivNDtvatlla~~y~~~~~~iglIlGTG~-Na~yie~ 262 (289)
...+|...|..++..+..+....-+.+|-|. -..++..
T Consensus 74 ~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~ 112 (276)
T 4ehu_A 74 DKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDN 112 (276)
T ss_dssp SEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECT
T ss_pred CcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEe
Confidence 3567999999888888766665566666655 4555543
No 56
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=92.74 E-value=0.32 Score=47.67 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=25.2
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEe
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEV 129 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~ 129 (289)
.+||+||+|.|+.|+.+++.+|+ ++...+..|
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~---vv~~~~~~~ 41 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELN---VFYEESVHF 41 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEEEEEH
T ss_pred CEEEEEEEcCcCEEEEEECCCCC---EEEEEEEec
Confidence 37999999999999999998775 454444444
No 57
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=92.19 E-value=3.9 Score=35.36 Aligned_cols=49 Identities=20% Similarity=0.325 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCceEEEEEechHHHhhcccccCCCcEEEEEEccCc-cceeeec
Q 022975 209 GELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT-NAAYVER 262 (289)
Q Consensus 209 ~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~~~~~iglIlGTG~-Na~yie~ 262 (289)
+.+++++++.|++ +..++++..|.+++....+ .+-+=+|-|+ ..+++.+
T Consensus 109 ~~~~~~~~~~g~~--~~~i~~e~~A~a~~~~~~~---~~viDiGggst~~~~~~~ 158 (272)
T 3h1q_A 109 EACGHVVAGAGLE--LVTLVDEPVAAARALGIND---GIVVDIGGGTTGIAVIEK 158 (272)
T ss_dssp THHHHHHHHTTCE--EEEEECHHHHHHHHHTCSS---EEEEEECSSCEEEEEEET
T ss_pred HHHHHHHHHcCCe--eeecccHHHHHHHHHcCCC---EEEEEECCCcEEEEEEEC
Confidence 3456666666775 5788999999887654432 2333356665 4444443
No 58
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=91.42 E-value=0.34 Score=43.48 Aligned_cols=45 Identities=13% Similarity=0.130 Sum_probs=30.4
Q ss_pred EEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHH
Q 022975 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAA 150 (289)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~ 150 (289)
+|+||+|+||+++++++ ++ .+. ..|++++... .+.+++..++.+.
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~----~~~r~~T~~~-~t~de~~~~l~~l 46 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELR----QHWRMETDRH-KTEDEYGMLVKQL 46 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEE----EEEEEECCTT-CCHHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE--CC--EEE----EEEEecCCCc-CCHHHHHHHHHHH
Confidence 68999999999999996 22 233 2566776543 4566666665443
No 59
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=87.34 E-value=16 Score=34.48 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=37.7
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechHHHhhcccccC--CCcEEEEEEccCc-cceeeecc
Q 022975 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN--KDAIAAVILGTGT-NAAYVERA 263 (289)
Q Consensus 206 dv~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~--~~~~iglIlGTG~-Na~yie~~ 263 (289)
+.++-+.+++++.|+++ ..+++...|+.++....+ +...+-+=+|-|| +.+.+.++
T Consensus 168 ~~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g 226 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSP--FQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNG 226 (419)
T ss_dssp HHHHHHHHHHHTTSCSC--EEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETT
T ss_pred HHHHHHHHHHHHcCCcE--EEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECC
Confidence 36778889998888864 678999988866532211 1234444589998 77776654
No 60
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=86.07 E-value=0.78 Score=40.77 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=19.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCC
Q 022975 96 LFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
.||+||+|+|+.++++++.+|+
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g~ 25 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGKE 25 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTE
T ss_pred EEEEEEeccceEEEEEEeCCCC
Confidence 5899999999999999987664
No 61
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=85.76 E-value=4 Score=37.78 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHhhcccccC-----CCcEEEEEEccCc-cceee
Q 022975 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN-----KDAIAAVILGTGT-NAAYV 260 (289)
Q Consensus 207 v~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~-----~~~~iglIlGTG~-Na~yi 260 (289)
-.+.++++.++.|++ ++.++|+..|+.++..... +...+=+=+|-|| ..+.+
T Consensus 165 ~r~~~~~a~~~AGl~--~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~ 222 (409)
T 4gni_A 165 QKAALIAAAAAADLE--VLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVL 222 (409)
T ss_dssp HHHHHHHHHHHTTCE--EEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCCC--eEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEE
Confidence 356788888888874 5899999999988876542 2334444478888 44444
No 62
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=85.09 E-value=4.8 Score=37.02 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHhhcccccC------CCcEEEEEEccCc-cceeee
Q 022975 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN------KDAIAAVILGTGT-NAAYVE 261 (289)
Q Consensus 207 v~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~------~~~~iglIlGTG~-Na~yie 261 (289)
-.+.+.++.++.|++ ++.++|+.+|+.++..... +...+=+=+|-|| ..+.++
T Consensus 173 ~r~~~~~a~~~AGl~--~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~ 232 (404)
T 3i33_A 173 QRQATKDAGTITGLN--VLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 232 (404)
T ss_dssp HHHHHHHHHHHHTCE--EEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHcCCC--eEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEE
Confidence 456777888777875 5899999999988765532 2334444578888 454443
No 63
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=83.57 E-value=4.4 Score=37.01 Aligned_cols=52 Identities=21% Similarity=0.235 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHhhcccccC---CCcEEEEEEccCc-cceee
Q 022975 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVILGTGT-NAAYV 260 (289)
Q Consensus 207 v~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~---~~~~iglIlGTG~-Na~yi 260 (289)
-.+.+.++.++.|++ ++.++|+.+|+.++..... ....+=+=+|-|| ..+.+
T Consensus 168 ~r~~~~~a~~~aGl~--~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 168 QRQATKDAGTIAGLN--VLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp HHHHHHHHHHHTTCE--EEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCCc--eEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEE
Confidence 356677888777875 5899999999998764432 2233344467777 44444
No 64
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=73.12 E-value=16 Score=35.99 Aligned_cols=53 Identities=21% Similarity=0.265 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechHHHhhcccccC---CCcEEEEEEccCc-cceeee
Q 022975 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVILGTGT-NAAYVE 261 (289)
Q Consensus 207 v~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~---~~~~iglIlGTG~-Na~yie 261 (289)
-.+.+.+|....|++ ++.++|+.+|+.++..... +..++-+=+|-|| ..+.++
T Consensus 150 qr~a~~~Aa~~AGl~--v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 4b9q_A 150 QRQATKDAGRIAGLE--VKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIE 206 (605)
T ss_dssp HHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHcCCc--eEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 456677888777875 5889999999988764432 2344445588888 455444
No 65
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=69.36 E-value=31 Score=25.79 Aligned_cols=21 Identities=24% Similarity=0.177 Sum_probs=16.3
Q ss_pred cEEEEeeCCceEEEEEEEeCC
Q 022975 96 LFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g 116 (289)
++||||+|-..+=+++-+..+
T Consensus 2 riLglD~G~kriGvAvsd~~~ 22 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEGV 22 (98)
T ss_dssp CEEEEEESSSEEEEEEECSCC
T ss_pred cEEEEEeCCCEEEEEEEeCCC
Confidence 489999999887777765544
No 66
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=66.06 E-value=14 Score=30.22 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=19.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCC
Q 022975 96 LFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
++||||-|=++.=.++++.+|+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETT
T ss_pred EEEEEccCCCCeeEEEEEecCC
Confidence 4799999999999999998775
No 67
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=63.28 E-value=18 Score=35.03 Aligned_cols=76 Identities=20% Similarity=0.109 Sum_probs=44.8
Q ss_pred eeecccccCCCCcccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcc-cC-CchhHHHHHHHHHHHHHHh
Q 022975 80 MLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TG-SSHELFDYIAAALAKFVAT 157 (289)
Q Consensus 80 Mlps~v~~lP~G~E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~-~~-~~~~lfd~Ia~~I~~fl~~ 157 (289)
|-|.+.. |.-....+|-+||+|-.++|+.+++..++...++........+-+.+. ++ =.++-.+...++++.|.+.
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~ 79 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVL 79 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 4455532 443444579999999999999999886543333322212223333321 11 1457788888899888653
No 68
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=62.78 E-value=9.1 Score=34.80 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=30.9
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHH
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~f 154 (289)
..+|++|=|.||||+-+++ +|+ ++.+ ..-+..+......++-.-+.+.+.++
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g~---vl~~----~~~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GEE---CLES----RQSEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TTE---EEEE----EEESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred ccEEEEEecchheeeeeec-CCc---eehh----hcCCCchhhcCcccHHHHHHHHHHHh
Confidence 4689999999999999987 542 4542 22344444333334444444444443
No 69
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=61.33 E-value=32 Score=30.99 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=38.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcc-cC-CchhHHHHHHHHHHHHHHh
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TG-SSHELFDYIAAALAKFVAT 157 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~-~~-~~~~lfd~Ia~~I~~fl~~ 157 (289)
+|-+||+|-.++|+.+++..+..-+++.......++-+.+. ++ =.++-.+...++++.|.+.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 57899999999999999987532223322222223333321 11 1456788888888888663
No 70
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=57.43 E-value=53 Score=26.09 Aligned_cols=23 Identities=26% Similarity=0.226 Sum_probs=18.3
Q ss_pred ccEEEEeeCCceEEEEEEEeCCC
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
+.+||||+|-..+=+++-+..+.
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~ 25 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITG 25 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTT
T ss_pred CeEEEEEeCCCEEEEEEEcCCCC
Confidence 57999999998888887776543
No 71
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=57.08 E-value=8.6 Score=35.52 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=31.6
Q ss_pred ccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHH
Q 022975 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFV 155 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl 155 (289)
..+|++|=|.||||+-+++-+|+ ++.+ .+-+..+.....+++-+-+.+.+.++.
T Consensus 7 ~~~IavDWGTSnlRa~l~~~~g~---vl~~----~~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 7 GYYAAVDWGTSSFRLWIIGEDGA---VLAE----RRSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp -CEEEEEECSSCEEEEEECTTSC---EEEE----EEESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CCEEEEEecchheehheecCCCC---chhh----hcCCcchhhcCcccHHHHHHHHHHHhh
Confidence 46999999999999998866554 4432 233444432222334344445455543
No 72
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=55.62 E-value=18 Score=32.82 Aligned_cols=51 Identities=20% Similarity=0.233 Sum_probs=33.7
Q ss_pred ccccEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHH
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~ 152 (289)
+.+.++.+|+||.++=++++++.+.. ++.. ....+| ..++++.++|++.++
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~--~s~~~~-----lGg~~i~~~I~~~i~ 238 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVE--LSFSLQ-----IGVGDAISALSRKIA 238 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGG--GCEEES-----CCHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEee--cCCCcc-----hhHHHHHHHHHHHHH
Confidence 45778999999999999999986531 1110 011222 346778888877654
No 73
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=54.10 E-value=33 Score=30.96 Aligned_cols=62 Identities=11% Similarity=0.168 Sum_probs=37.1
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCccc-C-CchhHHHHHHHHHHHHHHh
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-G-SSHELFDYIAAALAKFVAT 157 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~-~-~~~~lfd~Ia~~I~~fl~~ 157 (289)
.|-+||+|-+++|+.+++..+..-..+.......++-+.+.. + =.++-.+...+++..|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 588999999999999999864322223222122222222210 1 1346677788888888663
No 74
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=51.29 E-value=77 Score=26.06 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=20.0
Q ss_pred cEEEEeeCCceEEEEEEEeCCC
Q 022975 96 LFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
++||||-|=++.=+++++..|+
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 4799999999999999999876
No 75
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=46.70 E-value=13 Score=33.57 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=16.0
Q ss_pred cccEEEEeeCCceEEEEEE
Q 022975 94 KGLFYALDLGGTNFRVLRV 112 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V 112 (289)
...+++||+|+|..|+.++
T Consensus 19 ~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 19 SHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp --CEEEEEECSSEEEEEEE
T ss_pred CCeEEEEEEChhhEEEEEE
Confidence 3578999999999999887
No 76
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=46.60 E-value=2.4e+02 Score=30.47 Aligned_cols=102 Identities=12% Similarity=0.157 Sum_probs=55.9
Q ss_pred cEEEEeeC-Cc----eEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCCCCCCCCCee
Q 022975 96 LFYALDLG-GT----NFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (289)
Q Consensus 96 ~~LaiDlG-GT----nlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (289)
.+||||-| || -.++++|+-.|+ ++... .-++-|. .....++ -.+.+.+|+.+++.+ ..
T Consensus 517 ~VlaldpG~r~~g~~g~k~a~vD~~G~---vl~~~-~i~~~~~--~~~~~~~----a~~~l~~li~~~~~~-------vI 579 (1219)
T 3psi_A 517 KILSLTCGQGRFGADAIIAVYVNRKGD---FIRDY-KIVDNPF--DKTNPEK----FEDTLDNIIQSCQPN-------AI 579 (1219)
T ss_dssp CEEEEECTTCCTTTTCEEEEEECTTSC---EEEEE-EECSCTT--CSSCSHH----HHHHHHHHHHHHCCS-------EE
T ss_pred eEEEecCCCCCCCCCceEEEEECCCCC---EEEEE-EEcCCCC--ChhhHHH----HHHHHHHHHHHcCCc-------EE
Confidence 79999999 43 789999988776 34321 2222232 1111111 136788888888653 34
Q ss_pred eeeeeeeeeeeeccCCceEEEecccceeccCCCCCcHHHHHHHHHHHcCC----CceE-EEEEechHHHhhccc
Q 022975 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL----DMRV-AALVNDTIGTLAGGR 239 (289)
Q Consensus 171 ~lG~tfSfP~~q~~~~~~~Li~wtKgf~~~~~~g~dv~~~L~~al~r~~l----~v~v-~aivNDtvatlla~~ 239 (289)
.+|= .| .. | ..+++.+.+.+.++.+ +..+ +.++||+.|.+++..
T Consensus 580 aIGn-~s---re-----------t----------~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYsaS 628 (1219)
T 3psi_A 580 GING-PN---PK-----------T----------QKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQNS 628 (1219)
T ss_dssp EECC-SS---TH-----------H----------HHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHHTS
T ss_pred EECC-CC---HH-----------H----------HHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHhcC
Confidence 4431 11 00 1 2245555555554321 1122 679999988777654
No 77
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=45.84 E-value=54 Score=30.09 Aligned_cols=61 Identities=18% Similarity=0.118 Sum_probs=34.5
Q ss_pred cccEEEEeeCCceEEEEEEEeCCCc-ceeEEeeeEE-eecCCCcccCCchhHHHHHHHHHHHHHH
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGGRE-GRVVKQEFEE-VSIPPHLMTGSSHELFDYIAAALAKFVA 156 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~~-~~~~~~~~~~-~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~ 156 (289)
..++.+||+|-+.+|+.+.+...+. ...+....+. .++...+.....+ -+-+.+.+.+|.+
T Consensus 2 ~~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~--~~~~~~~l~~f~~ 64 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN--SVTIDAYLTMLLA 64 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS--HHHHHHHHHHHHT
T ss_pred CCEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC--HHHHHHHHHHHHH
Confidence 4568999999999999999885322 2223221111 3444444322211 3455666666655
No 78
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=44.30 E-value=16 Score=33.86 Aligned_cols=20 Identities=25% Similarity=0.655 Sum_probs=14.4
Q ss_pred EEEEeeCCceEEEEEEEeCC
Q 022975 97 FYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 97 ~LaiDlGGTnlRv~~V~l~g 116 (289)
+||+|+||-|+|+++++-+|
T Consensus 2 iiG~DIGGAn~K~a~~~~~g 21 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENG 21 (334)
T ss_dssp EEEEEEC--CEEEEEECSTT
T ss_pred eeEEEecccceeeeeecCCC
Confidence 68999999999998854344
No 79
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=43.55 E-value=1.7e+02 Score=30.94 Aligned_cols=56 Identities=14% Similarity=0.213 Sum_probs=33.0
Q ss_pred cEEEEeeC-Cc----eEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHHHHHHhcCCC
Q 022975 96 LFYALDLG-GT----NFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEG 161 (289)
Q Consensus 96 ~~LaiDlG-GT----nlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~ 161 (289)
.+||||-| || -.++++|+-.|+ ++... .-|+-|. .....++- .+.+.+|+.+++.+
T Consensus 520 ~VlaldpG~~~~~~~g~k~a~vd~~G~---~l~~~-~i~~~~~--~~~~~~~~----~~~l~~li~~~~~~ 580 (1030)
T 3psf_A 520 KILSLTCGQGRFGADAIIAVYVNRKGD---FIRDY-KIVDNPF--DKTNPEKF----EDTLDNIIQSCQPN 580 (1030)
T ss_dssp CEEEEECTTCCTTTSCEEEEEECTTSC---EEEEE-EECSCTT--CSSCCHHH----HHHHHHHHHHHCCS
T ss_pred eEEEecCCCCCCCCCCeEEEEECCCCC---EEEEE-EEcCCCC--ChhhHHHH----HHHHHHHHHHcCCc
Confidence 79999999 43 689999988776 34321 2222232 11111111 36788888888653
No 80
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=42.86 E-value=33 Score=27.65 Aligned_cols=22 Identities=27% Similarity=0.270 Sum_probs=19.0
Q ss_pred cEEEEeeCCceEEEEEEEeCCC
Q 022975 96 LFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
++||||.|-.++-+++++..|.
T Consensus 4 riLGiDpG~~riGvAv~d~~g~ 25 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGW 25 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSS
T ss_pred EEEEEEccCCEEEEEEEECCCC
Confidence 5899999999999999987654
No 81
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=42.37 E-value=1.2e+02 Score=27.24 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=22.5
Q ss_pred CCCcccccEEEEeeCCceEEEEEEEeCCC
Q 022975 89 PTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 89 P~G~E~G~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
..+.....++.+|+||.++-+.+++..+.
T Consensus 200 ~~~~~~~~vlV~D~Gggt~dvsv~~~~~~ 228 (394)
T 3qfu_A 200 DKSDKEHQIIVYDLGGGTFDVSLLSIENG 228 (394)
T ss_dssp TSCSSCEEEEEEEECSSCEEEEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCceeEEEEEEeCC
Confidence 33334557899999999999999988654
No 82
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=41.58 E-value=65 Score=31.07 Aligned_cols=63 Identities=19% Similarity=0.220 Sum_probs=39.6
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCccc-C-CchhHHHHHHHHHHHHHHhc
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-G-SSHELFDYIAAALAKFVATE 158 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~-~-~~~~lfd~Ia~~I~~fl~~~ 158 (289)
.|-+||+|-.++|..+++..+..-.++........+-+.+.. + =.++-.+...+++..|.+.-
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999864322233222122222222211 1 13578899999999997654
No 83
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=39.07 E-value=57 Score=29.79 Aligned_cols=59 Identities=15% Similarity=0.130 Sum_probs=38.8
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcc-eeEEeeeEEeecCCCcccC------CchhHHHHHHHHHHHHHHhc
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREG-RVVKQEFEEVSIPPHLMTG------SSHELFDYIAAALAKFVATE 158 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~-~~~~~~~~~~~Ip~~~~~~------~~~~lfd~Ia~~I~~fl~~~ 158 (289)
.|-+||+|-.++|+.+.+...++. .++. ..+.+-.+-.+ =.++-.+...+++..|.+.-
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~----~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVP----RILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI 82 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEE----EEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEE----EEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999863322 2222 22333333211 14577888889999997754
No 84
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=39.01 E-value=29 Score=33.34 Aligned_cols=48 Identities=17% Similarity=0.330 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCcccccEEEEe
Q 022975 50 TPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALD 101 (289)
Q Consensus 50 ~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~E~G~~LaiD 101 (289)
+|++.+++|.+-+.+++++-...- .+.|++++...+|+..+ ..+.|+|
T Consensus 24 is~~~~~~I~~~L~~~l~~~~~~~---~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 24 LSKQSIERITKILLDELENVRENE---QIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCS---SHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhh---chhhhhhhceECCCCCC-ceEEEec
Confidence 799999999999999988877652 67888999999997744 4788988
No 85
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=34.26 E-value=19 Score=32.67 Aligned_cols=52 Identities=23% Similarity=0.291 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHhhcccccC---CCcEEEEEEccCc-cceeee
Q 022975 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVILGTGT-NAAYVE 261 (289)
Q Consensus 208 ~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~---~~~~iglIlGTG~-Na~yie 261 (289)
.+.+.+++++.|++ ++.++|+.+|++++..... +...+-+=+|-|| ..+.++
T Consensus 151 r~~~~~a~~~aGl~--~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~ 206 (383)
T 1dkg_D 151 RQATKDAGRIAGLE--VKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE 206 (383)
T ss_dssp HHHHHHHHHHTTCE--ESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHcCCc--eEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEE
Confidence 45566777666764 5778999999988655532 2344444467777 555554
No 86
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=33.60 E-value=75 Score=22.86 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 466777778888999999999999999999999763
No 87
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=32.11 E-value=76 Score=23.06 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (94)
T 1p71_A 4 GELVDAVAEKASVTKKQADAVLTAALETIIEAVSSG 39 (94)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456677777788999999999999999999999763
No 88
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=31.92 E-value=78 Score=22.71 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1b8z_A 4 KELIDRVAKKAGAKKKDVKLILDTILETITEALAKG 39 (90)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456777777788999999999999999999999763
No 89
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=31.77 E-value=91 Score=23.92 Aligned_cols=43 Identities=16% Similarity=0.045 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCc
Q 022975 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSK 77 (289)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~ 77 (289)
..+.+.|+++.+.-.++++.-..|-..|-.-|.+.|+..-.|.
T Consensus 12 ~aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL~~~vksk 54 (108)
T 1nvp_D 12 NSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNR 54 (108)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4588999999999999999999999999999999997643343
No 90
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=31.70 E-value=56 Score=24.24 Aligned_cols=35 Identities=9% Similarity=0.130 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q 022975 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHA 68 (289)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~ 68 (289)
.+.+.++++++.+.|..+.+.+..=+..|.+++.+
T Consensus 55 ~rtv~eIv~~L~~~y~~~~e~i~~DV~~FL~~L~~ 89 (95)
T 3g2b_A 55 TQSLAQIAQTLAAEFDADASEIETDVIELTTTLHQ 89 (95)
T ss_dssp SSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 44589999999999999999998888889888865
No 91
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=31.70 E-value=73 Score=23.19 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 8 eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g 42 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKEATVVVQTVVESITNTLAAG 42 (93)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56667777778999999999999999999999763
No 92
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=31.44 E-value=72 Score=31.92 Aligned_cols=24 Identities=29% Similarity=0.310 Sum_probs=20.2
Q ss_pred ccccEEEEeeCCceEEEEEEEeCC
Q 022975 93 EKGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 93 E~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
+..+=+|+|+|-|+++..+++|..
T Consensus 204 ~~~~GlAvDiGTTtv~~~LvdL~t 227 (631)
T 3zyy_X 204 QRVFGLAIDIGTTTVVVQLVDLVS 227 (631)
T ss_dssp CCCEEEEEEECSSEEEEEEEETTT
T ss_pred CCceEEEEEecccceeEEEEECCC
Confidence 344569999999999999999953
No 93
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=30.90 E-value=1.9e+02 Score=25.97 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=20.4
Q ss_pred cccEEEEeeCCceEEEEEEEeCCC
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
...++.+|+||.++-+.+++..+.
T Consensus 213 ~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 213 EKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEEECSSCEEEEEEEEETT
T ss_pred CceEEEEECCCCcEEEEEEEEeCC
Confidence 446899999999999999988654
No 94
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=30.80 E-value=77 Score=22.82 Aligned_cols=36 Identities=8% Similarity=0.170 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 2o97_B 4 SQLIDKIAAGADISKAAAGRALDAIIASVTESLKEG 39 (90)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 466777878888999999999999999999999763
No 95
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=30.32 E-value=30 Score=30.82 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHhhccccc--CCCcEEEEEEccCc-cceeeecc
Q 022975 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH--NKDAIAAVILGTGT-NAAYVERA 263 (289)
Q Consensus 208 ~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~--~~~~~iglIlGTG~-Na~yie~~ 263 (289)
.+.+.+++++.|++ ++.++|+.+|++++.... .+.+.+-+=+|-|| ..+.+...
T Consensus 111 r~~~~~a~~~aG~~--~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~ 167 (344)
T 1jce_A 111 RRAILDAGLEAGAS--KVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLG 167 (344)
T ss_dssp HHHHHHHHHHTTCS--EEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETT
T ss_pred HHHHHHHHHHcCCC--eEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcC
Confidence 45677788777876 589999999998876543 23455555567776 55555443
No 96
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=30.27 E-value=98 Score=24.28 Aligned_cols=44 Identities=14% Similarity=0.043 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCc
Q 022975 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSK 77 (289)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~ 77 (289)
=..+.+.|+++.+.-.++++.-.+|-..|-.-|.+.|+..-.|.
T Consensus 15 G~aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL~~~vksk 58 (121)
T 1nh2_D 15 GNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSK 58 (121)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHSCCCE
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34588999999999999999999999999999999997543343
No 97
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=30.24 E-value=84 Score=23.14 Aligned_cols=36 Identities=6% Similarity=0.152 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~g 39 (99)
T 3c4i_A 4 AELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKG 39 (99)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356677777788999999999999999999999763
No 98
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=29.09 E-value=36 Score=32.52 Aligned_cols=52 Identities=21% Similarity=0.274 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHhhcccccC--CCcEEEEEEccCc-cceeee
Q 022975 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN--KDAIAAVILGTGT-NAAYVE 261 (289)
Q Consensus 208 ~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~--~~~~iglIlGTG~-Na~yie 261 (289)
.+.+.++.+..|++ ++.++|+.+|++++..... +...+=+=+|-|| ..+.++
T Consensus 125 r~a~~~a~~~AGl~--~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~ 179 (509)
T 2v7y_A 125 RQATKDAGRIAGLE--VERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILE 179 (509)
T ss_dssp HHHHHHHHHHTTCE--EEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHcCCC--eEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 35666777766775 6899999999988755532 2344444467776 444443
No 99
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=28.73 E-value=2.1e+02 Score=28.41 Aligned_cols=23 Identities=9% Similarity=0.223 Sum_probs=20.0
Q ss_pred cccEEEEeeCCceEEEEEEEeCC
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
...++.+|+||.++-+.++++.+
T Consensus 196 ~~~vlV~DlGGGT~Dvsv~~~~~ 218 (675)
T 3d2f_A 196 PRIVAFVDIGHSSYTCSIMAFKK 218 (675)
T ss_dssp CEEEEEEEECSSCEEEEEEEEET
T ss_pred CcEEEEEEcCCCcEEEEEEEecC
Confidence 34699999999999999999854
No 100
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=28.21 E-value=96 Score=22.75 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 6 ~eli~~ia~~~~ls~~~~~~vl~~~~~~i~~~L~~G 41 (99)
T 1owf_A 6 AEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENG 41 (99)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 466777777888999999999999999999999763
No 101
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=28.16 E-value=37 Score=30.14 Aligned_cols=18 Identities=17% Similarity=0.338 Sum_probs=16.7
Q ss_pred cEEEEeeCCceEEEEEEE
Q 022975 96 LFYALDLGGTNFRVLRVQ 113 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~ 113 (289)
-+|+||+|-||+++++++
T Consensus 24 M~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred cEEEEEeCCCeeEEEEEe
Confidence 589999999999999986
No 102
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=27.90 E-value=32 Score=33.89 Aligned_cols=19 Identities=37% Similarity=0.455 Sum_probs=0.0
Q ss_pred ccEEEEeeCCceEEEEEEE
Q 022975 95 GLFYALDLGGTNFRVLRVQ 113 (289)
Q Consensus 95 G~~LaiDlGGTnlRv~~V~ 113 (289)
+.++|||||-||..+++++
T Consensus 2 ~~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp --CEEEECCSSEEEEEEEE
T ss_pred CCEEEEEcCCcCEEEEEEE
No 103
>2zrr_A Mundticin KS immunity protein; antiparallel four-helix bundle, antimicrobial protein; 1.80A {Enterococcus mundtii}
Probab=26.50 E-value=1.1e+02 Score=23.99 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=32.6
Q ss_pred ccccHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHh
Q 022975 30 STGRWARAVAILKEMEEKCGT--PIGKLRQVADAMTVEMHAG 69 (289)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~~~~--~~~~L~~i~~~f~~em~~g 69 (289)
.++|..++..+++++...+.. ..+.|+++-..+++|++.+
T Consensus 30 GkER~~~Ai~II~~Ll~~l~~~~~~~~Lk~vL~~Y~~ELk~~ 71 (118)
T 2zrr_A 30 GDDRRKKAEVIITELLDDLEIDLGNESLRKVLGSYLKKLKNE 71 (118)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSCSSSHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHhcC
Confidence 346888899999999888875 4778999999999997654
No 104
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=26.45 E-value=2.4e+02 Score=25.37 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=20.3
Q ss_pred cccEEEEeeCCceEEEEEEEeCCC
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGGR 117 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g~ 117 (289)
...++.+|+||.++-+.+++..+.
T Consensus 204 ~~~vlv~D~GgGT~dvsv~~~~~~ 227 (409)
T 4gni_A 204 DKIIVVADLGGSRSDVTVLASRSG 227 (409)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCEEEEEECCCCceEEEEEEEeCC
Confidence 346999999999999999988654
No 105
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=25.06 E-value=2.4e+02 Score=27.10 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=20.0
Q ss_pred cccEEEEeeCCceEEEEEEEeCC
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
...++.+|+||.++-+.++++.+
T Consensus 192 ~~~vlV~D~GgGT~Dvsv~~~~~ 214 (554)
T 1yuw_A 192 ERNVLIFDLGGGTFDVSILTIAA 214 (554)
T ss_dssp CEEEEEEEECSSCEEEEEEEEET
T ss_pred CcEEEEEEcCCCeEEEEEEEEcC
Confidence 35799999999999999999853
No 106
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=24.17 E-value=36 Score=33.02 Aligned_cols=52 Identities=17% Similarity=0.226 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHhhcccccC----CCcEEEEEEccCc-cceeee
Q 022975 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN----KDAIAAVILGTGT-NAAYVE 261 (289)
Q Consensus 208 ~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~~----~~~~iglIlGTG~-Na~yie 261 (289)
.+.+.+|....|++ ++.++|+.+|+.++..... +...+=+=+|-|| ..+.++
T Consensus 155 r~a~~~A~~~AGl~--~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~ 211 (554)
T 1yuw_A 155 RQATKDAGTIAGLN--VLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILT 211 (554)
T ss_dssp HHHHHHHHHTTTCE--EEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHcCCC--eEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEE
Confidence 34556666655664 6899999999888754432 2445555577777 455444
No 107
>1nxu_A Hypothetical oxidoreductase YIAK; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.80A {Escherichia coli} SCOP: c.122.1.1 PDB: 1s20_A*
Probab=23.58 E-value=67 Score=29.42 Aligned_cols=56 Identities=16% Similarity=0.291 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCc
Q 022975 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (289)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~ 92 (289)
..++++++.+.-....+|.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 5 ~~~l~~~~~~~l~~~G~~~~~A~~vA~~lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 60 (333)
T 1nxu_A 5 FEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHG---VNRFPRFIQQLENGD 60 (333)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCCTTT---GGGHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCccccC---HHHHHHHHHHHHcCC
Confidence 45678888888888999999999999999987666766543 788999998766663
No 108
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=23.54 E-value=1.4e+02 Score=21.54 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=30.8
Q ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHhhccC
Q 022975 38 VAILKEMEEK-CGTPIGKLRQVADAMTVEMHAGLASE 73 (289)
Q Consensus 38 ~~~l~~~~~~-~~~~~~~L~~i~~~f~~em~~gL~~~ 73 (289)
.++++.+.+. ..++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~~ls~~~~~~~l~~~~~~i~~~L~~g 40 (94)
T 1owf_B 4 SELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQG 40 (94)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4677778777 48999999999999999999999763
No 109
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=22.94 E-value=50 Score=27.39 Aligned_cols=66 Identities=11% Similarity=0.161 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHHHHcCCCce-EEEEEec-----hHHHhhcccccC-CCcEEEEEEccCccceeeecccccCcc
Q 022975 202 TVGEDVVGELTKAMERIGLDMR-VAALVND-----TIGTLAGGRYHN-KDAIAAVILGTGTNAAYVERAHAIPKW 269 (289)
Q Consensus 202 ~~g~dv~~~L~~al~r~~l~v~-v~aivND-----tvatlla~~y~~-~~~~iglIlGTG~Na~yie~~~~i~k~ 269 (289)
--|.++++.|.+.|+++|+.|. +-.--.| -.+..++.+... +...-=+|+|||.+.+..-+ ++|+.
T Consensus 30 haG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTGiG~sIaAN--Kv~GI 102 (166)
T 3s5p_A 30 HGGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTGIGISIAAN--KMKGI 102 (166)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHH--TSTTC
T ss_pred chHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHHHhh--cCCCe
Confidence 3468899999999999988653 2211122 233344444433 34455578999988877633 44443
No 110
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=22.91 E-value=82 Score=29.23 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=46.8
Q ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeee-cccccCCCCc
Q 022975 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLI-SYVDNLPTGD 92 (289)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlp-s~v~~lP~G~ 92 (289)
...++++++.+.-....+|.+.-+.+++.+.+-=..|..+++ +.+|| .|+..+-.|.
T Consensus 10 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~Adl~G~~SHG---v~rlp~~Y~~~l~~G~ 67 (365)
T 3i0p_A 10 SIDTIKEFMYQVLLKVGSDEENARMVRDTLIAADLRGMDTHG---IQRFKTVYIDRIKKGM 67 (365)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTSS---GGGHHHHTHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HhHhHHHHHHHHHcCC
Confidence 467788888888889999999999999999986666776543 78899 9998766664
No 111
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=22.69 E-value=1.2e+02 Score=25.84 Aligned_cols=48 Identities=19% Similarity=0.375 Sum_probs=32.2
Q ss_pred cEEEEeeCCceEEEEEEEeCCCcceeEEeeeEEeecCCCcccCCchhHHHHHHHHHH
Q 022975 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152 (289)
Q Consensus 96 ~~LaiDlGGTnlRv~~V~l~g~~~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~I~ 152 (289)
.+..+|+||....+.++.-+|. .. .+.+-.... ....++||.+|..+.
T Consensus 94 ~~~vl~lgG~~~~~~~~~~~g~----~~----~~~~~~~~~-~g~G~f~d~~a~~l~ 141 (276)
T 4ehu_A 94 TRTIIDIGGQDAKVLKLDNNGR----LL----NFLMNDKCA-AGTGRFLDVMAKIIE 141 (276)
T ss_dssp CCEEEEECSSCEEEEEECTTSC----EE----EEEEECSCS-TTSHHHHHHHHHHHT
T ss_pred CCeEEEEcCCCceEEEEEecCc----eE----EEEeCCCcC-cchhhHHHHHHHHhc
Confidence 5688999999999988855443 11 223344443 345679999998763
No 112
>3uoe_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.31A {Sinorhizobium meliloti}
Probab=22.45 E-value=67 Score=29.78 Aligned_cols=58 Identities=28% Similarity=0.239 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCc
Q 022975 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (289)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~ 92 (289)
-...++++++.+.-....+|.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 26 v~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~Adl~G~~SHG---v~Rlp~Y~~~l~~G~ 83 (357)
T 3uoe_A 26 LPPARLRNLSVALLEKRGVPADSARLQANLLLEAELRGLPSHG---LQRLPLLLSRLDKGL 83 (357)
T ss_dssp ECHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCGGGT---GGGHHHHHHHHHTTS
T ss_pred EcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HHHHHHHHHHHHcCC
Confidence 3567788889888889999999999999999986666766543 788999998766664
No 113
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=22.00 E-value=3.1e+02 Score=25.90 Aligned_cols=23 Identities=35% Similarity=0.586 Sum_probs=19.9
Q ss_pred cccEEEEeeCCceEEEEEEEeCC
Q 022975 94 KGLFYALDLGGTNFRVLRVQLGG 116 (289)
Q Consensus 94 ~G~~LaiDlGGTnlRv~~V~l~g 116 (289)
...++.+|+||.++-+.+++..+
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~~~~~ 182 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSILELGD 182 (509)
T ss_dssp SEEEEEEEECSSCEEEEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEEEEcC
Confidence 45799999999999999998853
No 114
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=21.94 E-value=47 Score=33.23 Aligned_cols=52 Identities=17% Similarity=0.192 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCCceEEEEEechHHHhhccccc---------CCCcEEEEEEccCc-cceeee
Q 022975 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH---------NKDAIAAVILGTGT-NAAYVE 261 (289)
Q Consensus 208 ~~~L~~al~r~~l~v~v~aivNDtvatlla~~y~---------~~~~~iglIlGTG~-Na~yie 261 (289)
.+.+.+|....|++ ++.++|+.+|+.++.... .+..++=+=+|-|| ..+.++
T Consensus 154 R~a~~~Aa~~AGl~--~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~ 215 (675)
T 3d2f_A 154 RYNIADAARIAGLN--PVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMA 215 (675)
T ss_dssp HHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHcCCc--eEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 34555666666765 589999999998875431 12344445578777 555543
No 115
>2x06_A L-sulfolactate dehydrogenase; oxidoreductase, hyperthermostable, coenzyme M, methanogens, coenzyme M biosynthesis; HET: NAD; 2.50A {Methanocaldococcus jannaschii}
Probab=21.82 E-value=64 Score=29.71 Aligned_cols=56 Identities=20% Similarity=0.315 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCc
Q 022975 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (289)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~ 92 (289)
.+++.+++.+.-....+|.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 5 ~e~~~~~~~~il~~~G~~~~~A~~vA~~lv~adl~G~~SHG---v~rl~~Y~~~l~~G~ 60 (344)
T 2x06_A 5 PENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHG---IGRFPQYITALKLGN 60 (344)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCGGGT---GGGHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccC---HHHHHHHHHHHHcCC
Confidence 45677888888888999999999999999887666766643 678999998765554
No 116
>1xrh_A Ureidoglycolate dehydrogenase; structural genomics, protein structure initiative, NYSGXRC, ALLD, GLXB8, B0517, PSI; 2.25A {Escherichia coli} SCOP: c.122.1.1
Probab=21.40 E-value=76 Score=29.29 Aligned_cols=57 Identities=14% Similarity=0.204 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCc
Q 022975 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (289)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~ 92 (289)
...++++++.+.-....++.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 6 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 62 (351)
T 1xrh_A 6 SRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHG---AVRVEYYAERISKGG 62 (351)
T ss_dssp CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTCGGGT---GGGHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccC---HHHHHHHHHHHHcCC
Confidence 356678888888888899999999999999987667776653 678999998766664
No 117
>1wtj_A Ureidoglycolate dehydrogenase; NADPH dependent enzyme, oxidoreductase; 1.55A {Pseudomonas syringae PV} PDB: 2cwf_A* 2cwh_A*
Probab=21.32 E-value=73 Score=29.30 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=46.9
Q ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCcc
Q 022975 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDE 93 (289)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~E 93 (289)
...++++++.+.-....++.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.-
T Consensus 14 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~i 71 (343)
T 1wtj_A 14 SYPQLIDLLRRIFVVHGTSPEVADVLAENCASAQRDGSHSHG---IFRIPGYLSSLASGWV 71 (343)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCGGGT---GGGHHHHHHHHHTTSS
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccc---HHHHHHHHHHHHcCCC
Confidence 467788888888888999999999999999987666776643 7789999987666643
No 118
>4h8a_A Ureidoglycolate dehydrogenase; rossmann fold, oxidoreductase; HET: NAI; 1.64A {Escherichia coli} PDB: 4fju_A* 4fjs_A* 1xrh_A
Probab=20.78 E-value=64 Score=29.64 Aligned_cols=57 Identities=14% Similarity=0.204 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeecccccCCCCc
Q 022975 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92 (289)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlps~v~~lP~G~ 92 (289)
...++++++.+.-....+|.+.-+.+++.+.+-=..|..+++ +.+||.|+..+-.|.
T Consensus 6 ~~~~l~~~~~~~l~~~G~~~~~A~~vA~~Lv~adl~G~~SHG---v~rlp~Y~~~l~~G~ 62 (339)
T 4h8a_A 6 SRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHG---AVRVEYYAERISKGG 62 (339)
T ss_dssp CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCGGGT---GGGHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcccc---HHHHHHHHHHHHcCC
Confidence 356788888888888899999999999999987667776653 778999998665554
No 119
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=20.12 E-value=26 Score=28.63 Aligned_cols=65 Identities=11% Similarity=0.092 Sum_probs=39.8
Q ss_pred CCCCcHHHHHHHHHHHcCCCce-EEEEEec------hHHHhhcccccCCCcEEEEEEccCccceeeecccccCcc
Q 022975 202 TVGEDVVGELTKAMERIGLDMR-VAALVND------TIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKW 269 (289)
Q Consensus 202 ~~g~dv~~~L~~al~r~~l~v~-v~aivND------tvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~ 269 (289)
--|.++++.|.+.|+++|+.|. +-.--.| -.+..++.+.. +...-=+|+|||.+.+..-+ ++|+.
T Consensus 16 haG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~-~~d~GIliCGTGiG~siaAN--Kv~GI 87 (148)
T 4em8_A 16 HAGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVS-DTSFGVLICGTGIGMSIAAN--RHKNI 87 (148)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCB-TTBEEEEEESSSHHHHHHHT--TSTTC
T ss_pred chhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHH-HhCeEEEEccCcHHHHHHHh--cCCCe
Confidence 3568899999999999887642 2111122 23444444444 45555678999998877633 44443
Done!