Query 022978
Match_columns 289
No_of_seqs 168 out of 230
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 14:19:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v2b_A 23-kDa polypeptide of p 100.0 9.1E-38 3.1E-42 273.2 11.9 165 81-271 7-176 (177)
2 2xb3_A PSBP protein; photosynt 100.0 3.4E-34 1.2E-38 245.3 14.7 157 81-272 6-165 (165)
3 2lnj_A SLL1418 protein, putati 100.0 7.2E-35 2.5E-39 251.8 0.0 153 80-272 11-170 (170)
4 1tu1_A Hypothetical protein PA 97.6 0.00071 2.4E-08 56.4 12.2 72 195-274 73-144 (148)
5 3lyd_A Uncharacterized protein 94.3 0.2 6.7E-06 43.0 8.8 72 195-274 84-160 (161)
6 1ywi_A Formin-binding protein 34.2 17 0.00059 23.7 1.5 20 238-257 19-38 (41)
7 2ysi_A Transcription elongatio 32.9 13 0.00045 24.2 0.8 20 238-257 17-36 (40)
8 3rq0_A Glycosyl hydrolases fam 31.8 14 0.00046 33.7 0.9 51 51-101 6-60 (269)
9 1e0l_A Formin binding protein; 28.5 16 0.00056 23.2 0.6 20 238-257 13-32 (37)
10 1e0n_A Hypothetical protein; Y 25.9 16 0.00054 22.0 0.2 20 238-257 7-26 (27)
11 3ld7_A LIN0431 protein; DUF131 24.3 2.4E+02 0.0084 21.6 7.0 54 202-258 13-67 (101)
12 3hlz_A Uncharacterized protein 23.8 30 0.001 31.4 1.7 18 84-101 5-22 (269)
No 1
>1v2b_A 23-kDa polypeptide of photosystem II oxygen- evolving complex; alpha-beta, riken structural genomics/proteomics initiative, RSGI; HET: GLC; 1.60A {Nicotiana tabacum} SCOP: d.107.1.2
Probab=100.00 E-value=9.1e-38 Score=273.22 Aligned_cols=165 Identities=23% Similarity=0.390 Sum_probs=128.2
Q ss_pred cCcceeeeCCCceEEeccCCC-CCcceeccccccccccccCCCCCCCCCcceeeec-cccccccceeEEEEeCCchhhhh
Q 022978 81 VKMASFVDEINAYTYLYPMEL-PSKKFLFKWVESRKPERYSSAAPLSPNARLRIVS-ERVDIIDNLIISVTIGPPNVQFL 158 (289)
Q Consensus 81 ~~f~~~~D~~dGYsF~YP~~W-~s~e~~~~g~~~r~~D~~~s~apLs~nvrv~iv~-e~~~i~dn~~Vsvs~GPp~~~~l 158 (289)
.+|+.|. .|||+|+||.+| +.+++.++|++++|+|+++. ++|++|.|.+ ++++|.| +|+|++ ++
T Consensus 7 ~g~~~y~--~~gysf~yP~~W~~~~~~~~~G~~~~f~d~~~~----~~nvsV~v~p~~~~si~d-------lGspe~-~~ 72 (177)
T 1v2b_A 7 TDFQTYN--GDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDA----TSNVIVAITPTDKKSITD-------FGSPEQ-FL 72 (177)
T ss_dssp CCEEEEE--CSSEEEEEETTCEECCCCCSTTEEEEEEETTEE----EEEEEEEEEECSCSSGGG-------GCSHHH-HH
T ss_pred CCceEEe--cCCEEEEcCCCCcccccccCCCceEEEeCCcCC----CccEEEEEeCCCCCChhH-------CCCHHH-HH
Confidence 4599997 999999999999 55566788999999999973 2788898887 8899999 999986 43
Q ss_pred cccCccccchHHHHHhhhccc--cccccccccccccccEEeeeeceeCCeeeEEEEEEEecCCCCCCCCCCCcceEEEEE
Q 022978 159 KSKDKSTWNAKDVADSVLSDK--SALRVTSSQRMAESSVLDAHTSKVDGEPYWFYEYLIRKSPTNLGQEPNLYRHYVAST 236 (289)
Q Consensus 159 ~~~d~~~~~~~~la~~vLa~~--ssgr~~~g~rv~~a~ll~a~~r~~dGk~YY~~Ey~v~~~p~~~a~~~e~~RH~La~~ 236 (289)
+.+. +.|.+++|+++ +++++ +++.+++++||++++++.||++||+|||.+++ +++.|++||+|+++
T Consensus 73 ~~v~------~~l~~~~~~~~~~~~~gf-~~~~~~~a~ll~a~~r~~~G~~YY~~E~~~~~-----~~g~e~~rH~l~~~ 140 (177)
T 1v2b_A 73 SQVD------YLLGRQAYSGKTDSEGGF-ESDAVAIANVLETSTAEVGGKQYYYLSILTRT-----ADGNEGGKHQLVTA 140 (177)
T ss_dssp HHTG------GGC-------------------CCCEEEEEEEEEEEETTEEEEEEEEEEEC----------CCEEEEEEE
T ss_pred HHHH------HHHHHHhhcccccccCCc-ccCcccceEEEEeEEEEeCCeEEEEEEEEEec-----CCCCccccEEEEEE
Confidence 4332 56777778764 45555 34566789999999999999999999999998 34556999999999
Q ss_pred EEECCEEEEEEeecCcchhhhh-chhHHHhhcceeE
Q 022978 237 AEREGYLYSISASTLGKQWDEM-GPFLEKSVASFHL 271 (289)
Q Consensus 237 tv~~GkLYtl~~qa~EkrW~k~-~~~l~~vv~SFrv 271 (289)
||+|||||+|++|++|+||+++ ++.|++|++||+|
T Consensus 141 tv~~gkLY~l~~~a~e~~W~k~~~~~l~~v~~SF~v 176 (177)
T 1v2b_A 141 TVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSL 176 (177)
T ss_dssp EEETTEEEEEEEEEEGGGCSTTTTHHHHHHHHTCEE
T ss_pred EEECCEEEEEEEecCHHHhhhhHHHHHHHHHhheec
Confidence 9999999999999999999995 9999999999998
No 2
>2xb3_A PSBP protein; photosynthesis, zinc-binding, photosystem; 2.80A {Thermosynechococcus elongatus}
Probab=100.00 E-value=3.4e-34 Score=245.33 Aligned_cols=157 Identities=19% Similarity=0.373 Sum_probs=130.9
Q ss_pred cCcceeeeCCCceEEeccCCCCCcceecc-ccccccccccCCCCCCCCCcceeeec-c-ccccccceeEEEEeCCchhhh
Q 022978 81 VKMASFVDEINAYTYLYPMELPSKKFLFK-WVESRKPERYSSAAPLSPNARLRIVS-E-RVDIIDNLIISVTIGPPNVQF 157 (289)
Q Consensus 81 ~~f~~~~D~~dGYsF~YP~~W~s~e~~~~-g~~~r~~D~~~s~apLs~nvrv~iv~-e-~~~i~dn~~Vsvs~GPp~~~~ 157 (289)
.+|..|.|+.+||+|+||.+| .++.++ |++++|+|.++.. .|++|.|.+ . ..+|.| +|+|+++.
T Consensus 6 ~g~~~~~D~~~gysf~~P~~W--~~~~~~~g~~v~f~d~~~~~----~~v~V~v~p~~~~~~l~~-------~G~~e~va 72 (165)
T 2xb3_A 6 SGLQAYVDSYDGYEFLYPRGW--VQVQVEDPVDVVFHDIIETT----ENVSVVVNTVASTKSLEE-------LGSPEEVG 72 (165)
T ss_dssp CCEEEEEETTTTEEEEEETTE--EEECCCTTEEEEEEESSCTT----SEEEEEEEECSSCCCSGG-------GCCHHHHH
T ss_pred CCceEEEcCCCCEEEEcCCCC--eEecCCCCceEEEECcccCC----ceEEEEEecCCCCCChHH-------cCCHHHHH
Confidence 459999999999999999999 666777 9999999998732 678887766 3 378888 99998754
Q ss_pred hcccCccccchHHHHHhhhccccccccccccccccccEEeeeeceeCCeeeEEEEEEEecCCCCCCCCCCCcceEEEEEE
Q 022978 158 LKSKDKSTWNAKDVADSVLSDKSALRVTSSQRMAESSVLDAHTSKVDGEPYWFYEYLIRKSPTNLGQEPNLYRHYVASTA 237 (289)
Q Consensus 158 l~~~d~~~~~~~~la~~vLa~~ssgr~~~g~rv~~a~ll~a~~r~~dGk~YY~~Ey~v~~~p~~~a~~~e~~RH~La~~t 237 (289)
+.|++++++.+.++ +.++|+++++++.||++||+|||.+++ |..+ ..++.||+|++++
T Consensus 73 -----------~~l~~~~~~~~~~~--------~~~~l~~a~~r~~~G~~yY~~Ey~~~~-~~~~--~~~~~rh~l~~~~ 130 (165)
T 2xb3_A 73 -----------DRLLRNIIAPSESG--------RSSALIAATSQKADDKTYYILEYAVTL-PGDG--NTAQQRHNLSSIA 130 (165)
T ss_dssp -----------HHHHHHTTSCTTSS--------CEEEEEEEEEEEETTEEEEEEEEEEEC-C-------CCEEEEEEEEE
T ss_pred -----------HHHHHHhhcCCCCC--------cceEEEEeeeeecCCceEEEEEEEEec-CCCc--cCccccEEEEEEE
Confidence 66777777655433 349999999999999999999999987 1100 0248999999999
Q ss_pred EECCEEEEEEeecCcchhhhhchhHHHhhcceeEc
Q 022978 238 EREGYLYSISASTLGKQWDEMGPFLEKSVASFHLL 272 (289)
Q Consensus 238 v~~GkLYtl~~qa~EkrW~k~~~~l~~vv~SFrv~ 272 (289)
+++||||+|++|+||++|.++++.|++|++||+|+
T Consensus 131 v~~g~lY~l~~sape~~w~~~~~~l~~v~~SF~v~ 165 (165)
T 2xb3_A 131 VSRGKVYTLSVSAPEERWPKVEDQFKTIVSSFTVY 165 (165)
T ss_dssp EETTEEEEEEEEEEGGGHHHHHHHHHHHHHTCEEC
T ss_pred EECCEEEEEEEecCHHHhHHHHHHHHHHHhhEEeC
Confidence 99999999999999999999999999999999985
No 3
>2lnj_A SLL1418 protein, putative uncharacterized protein SLL1418; cyanop, photosystem II, PSBP, photosynthesis; NMR {Synechocystis SP}
Probab=100.00 E-value=7.2e-35 Score=251.85 Aligned_cols=153 Identities=21% Similarity=0.325 Sum_probs=133.7
Q ss_pred ccCcceeeeCCCceEEeccCCCCCcceecc----ccccccccccCCCCCCCCCcceeeec-cc-cccccceeEEEEeCCc
Q 022978 80 DVKMASFVDEINAYTYLYPMELPSKKFLFK----WVESRKPERYSSAAPLSPNARLRIVS-ER-VDIIDNLIISVTIGPP 153 (289)
Q Consensus 80 a~~f~~~~D~~dGYsF~YP~~W~s~e~~~~----g~~~r~~D~~~s~apLs~nvrv~iv~-e~-~~i~dn~~Vsvs~GPp 153 (289)
..+|+.|.|+.|||+|+||.+| +++.++ |++.+|+|.++.. +|++|.|.+ .+ .+|.| +|+|
T Consensus 11 ~~g~~~y~d~~~gy~f~~P~gW--~~~~~~~~~~g~~v~f~d~~~~~----~nvsV~v~p~~~~~si~d-------~G~p 77 (170)
T 2lnj_A 11 IASLQRYSDTKDGYEFLYPNGW--IGVDVKGASPGVDVVFRDLIERD----ENLSVIISEIPSDKTLTD-------LGTA 77 (170)
Confidence 4459999999999999999999 566667 9999999998742 678888777 44 88999 9999
Q ss_pred hhhhhcccCccccchHHHHHhhhccccccccccccccccccEEeeeeceeCCeeeEEEEEEEecCCCCCCCCC-CCcceE
Q 022978 154 NVQFLKSKDKSTWNAKDVADSVLSDKSALRVTSSQRMAESSVLDAHTSKVDGEPYWFYEYLIRKSPTNLGQEP-NLYRHY 232 (289)
Q Consensus 154 ~~~~l~~~d~~~~~~~~la~~vLa~~ssgr~~~g~rv~~a~ll~a~~r~~dGk~YY~~Ey~v~~~p~~~a~~~-e~~RH~ 232 (289)
+++. +.+++.+++++.++ ++++||++++++.||++||+|||.+++ + ++.||+
T Consensus 78 e~va-----------~~l~~~~~~~~~~~--------~~a~li~a~~~~~~G~~yY~~Ey~~~~--------~~~~~rh~ 130 (170)
T 2lnj_A 78 TDVG-----------YRFMKTVNDASQGD--------RQAELINAEARDEDGQVYYTLEYRVLV--------GDNVERHD 130 (170)
Confidence 8754 67888877665443 349999999999999999999999987 5 699999
Q ss_pred EEEEEEECCEEEEEEeecCcchhhhhchhHHHhhcceeEc
Q 022978 233 VASTAEREGYLYSISASTLGKQWDEMGPFLEKSVASFHLL 272 (289)
Q Consensus 233 La~~tv~~GkLYtl~~qa~EkrW~k~~~~l~~vv~SFrv~ 272 (289)
|+++++++||||+|++|+||++|.++++.|++|++||+|+
T Consensus 131 l~~~~v~~gklY~l~~~ape~~w~~~~~~l~~v~~SF~v~ 170 (170)
T 2lnj_A 131 LASVTTNRGKLITFDLSTAEDRWDTVKSLFDTVASSFHVY 170 (170)
Confidence 9999999999999999999999999999999999999985
No 4
>1tu1_A Hypothetical protein PA0094; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; 1.95A {Pseudomonas aeruginosa} SCOP: d.107.1.3
Probab=97.64 E-value=0.00071 Score=56.39 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=60.0
Q ss_pred EEeeeeceeCCeeeEEEEEEEecCCCCCCCCCCCcceEEEEEEEECCEEEEEEeecCcchhhhhchhHHHhhcceeEcCC
Q 022978 195 VLDAHTSKVDGEPYWFYEYLIRKSPTNLGQEPNLYRHYVASTAEREGYLYSISASTLGKQWDEMGPFLEKSVASFHLLPP 274 (289)
Q Consensus 195 ll~a~~r~~dGk~YY~~Ey~v~~~p~~~a~~~e~~RH~La~~tv~~GkLYtl~~qa~EkrW~k~~~~l~~vv~SFrv~~~ 274 (289)
++.....+.+|.+--.+||.=+. ....+|++-++.+.++++|.|+.+++..-|+..++.++.|++||+...+
T Consensus 73 ~~~~~~~~l~g~~a~~~e~~~~~--------~g~~~~Q~q~~~~~~~~~l~~t~t~~~~~~~~~~~~~~~i~~Sf~~~~~ 144 (148)
T 1tu1_A 73 LHKRWDINIHGHAAVLLDYQWQR--------EGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPT 144 (148)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE--------TTEEEEEEEEEECCSSSEEEEEEEECGGGHHHHHHHHHHHHHTCEECCC
T ss_pred EeeeEeEEEcCCcEEEEEEEEcc--------CCEEEEEEEEEEEECCeEEEEEEEcCCCCCHHHHHHHHHHHHhcccCCC
Confidence 34444444588888888888766 7788999999888877999999999999999999999999999998643
No 5
>3lyd_A Uncharacterized protein; PSI-2, MCSG, GEBA, genomic encyclopae bacteria and archaea, structural genomics, protein structur initiative; HET: MSE; 1.45A {Jonesia denitrificans}
Probab=94.30 E-value=0.2 Score=42.95 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=54.4
Q ss_pred EEeeeeceeCCeeeEEEEEEEecCCCCCCCCCCCcceE--EEEEEE-ECCEEEEE--EeecCcchhhhhchhHHHhhcce
Q 022978 195 VLDAHTSKVDGEPYWFYEYLIRKSPTNLGQEPNLYRHY--VASTAE-REGYLYSI--SASTLGKQWDEMGPFLEKSVASF 269 (289)
Q Consensus 195 ll~a~~r~~dGk~YY~~Ey~v~~~p~~~a~~~e~~RH~--La~~tv-~~GkLYtl--~~qa~EkrW~k~~~~l~~vv~SF 269 (289)
+++-...+.+|.+-|..||.=.. +..+.|. +..+.+ .+|..|.+ ++++.+.+-....+.++.|++||
T Consensus 84 ~~~r~~~~~~G~pa~~iey~y~~--------~~~g~~aq~~~~vvve~~~v~~vv~lt~T~~~~q~~~~~~d~q~iv~sl 155 (161)
T 3lyd_A 84 ERGRTETTVDGFPAYHIEYAYRH--------HGTITIAQMITLVEVSHPHAVDIIQLTATCAGDQTADYWDTFRLMHADL 155 (161)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE--------TTTEEEEEEEEEEEEECSSCEEEEEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred eecccccccCCcccEEEEEEEec--------CCCceEeeEEEEEEEecCCEEEEEEEEEEeccccchHHHHHHHHHhhee
Confidence 33344558899999999999644 5566662 344444 56655555 99999999999999999999999
Q ss_pred eEcCC
Q 022978 270 HLLPP 274 (289)
Q Consensus 270 rv~~~ 274 (289)
+|.|-
T Consensus 156 ~v~p~ 160 (161)
T 3lyd_A 156 TVQPH 160 (161)
T ss_dssp EEETT
T ss_pred EeccC
Confidence 99863
No 6
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=34.20 E-value=17 Score=23.67 Aligned_cols=20 Identities=20% Similarity=0.501 Sum_probs=16.7
Q ss_pred EECCEEEEEEeecCcchhhh
Q 022978 238 EREGYLYSISASTLGKQWDE 257 (289)
Q Consensus 238 v~~GkLYtl~~qa~EkrW~k 257 (289)
..+|+.|=.|+.+.+.+|++
T Consensus 19 ~~~G~~YYyN~~T~eS~We~ 38 (41)
T 1ywi_A 19 SPDGRTYYYNTETKQSTWEK 38 (41)
T ss_dssp ETTTEEEEEETTTTEEEESC
T ss_pred CCCCCEEEEECCCCCEEeCC
Confidence 45888888899999999975
No 7
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=32.85 E-value=13 Score=24.18 Aligned_cols=20 Identities=25% Similarity=0.519 Sum_probs=16.6
Q ss_pred EECCEEEEEEeecCcchhhh
Q 022978 238 EREGYLYSISASTLGKQWDE 257 (289)
Q Consensus 238 v~~GkLYtl~~qa~EkrW~k 257 (289)
..+|+.|=+|..+.|.+|++
T Consensus 17 ~~~G~~YYyN~~T~eS~We~ 36 (40)
T 2ysi_A 17 TPDGKVYYYNARTRESAWTK 36 (40)
T ss_dssp CTTSCEEEEETTTCCEESSC
T ss_pred CCCCCEEEEECCCCCEEeCC
Confidence 46788888888899999976
No 8
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis}
Probab=31.79 E-value=14 Score=33.70 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=11.9
Q ss_pred cchhHHHHHHHHHhhhhccCCCCCCCcccc-cCcc-eeeeCCCce--EEeccCCC
Q 022978 51 GFCRRDLVLFGLSSSLSLGFPTPGSVAGED-VKMA-SFVDEINAY--TYLYPMEL 101 (289)
Q Consensus 51 ~~~rR~~ll~gl~~~~a~~~p~~~A~A~~a-~~f~-~~~D~~dGY--sF~YP~~W 101 (289)
.+.||++++....++++.+++...|.|... .++. .+.|++||= +.+=+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~g~~lvw~DeF~g~~g~~~d~~~W 60 (269)
T 3rq0_A 6 NVDRRQMLLLSGLGATAAVLPVPRAAAVPNQTAASYVFADEFDGPAGSAPSAAKW 60 (269)
T ss_dssp ----------------------------------CCSEEECCCSCTTCCCCTTTE
T ss_pred hccchhHHHHHHHHHHHHhccchhcccCCCCCCCeEEEEecCCCCCCCCCCcccC
Confidence 356888777633333444455444444332 3343 577888873 34556788
No 9
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=28.46 E-value=16 Score=23.18 Aligned_cols=20 Identities=25% Similarity=0.579 Sum_probs=16.3
Q ss_pred EECCEEEEEEeecCcchhhh
Q 022978 238 EREGYLYSISASTLGKQWDE 257 (289)
Q Consensus 238 v~~GkLYtl~~qa~EkrW~k 257 (289)
..+|+.|=.|..+.+.+|++
T Consensus 13 ~~~G~~YYyN~~T~es~We~ 32 (37)
T 1e0l_A 13 TADGKTYYYNNRTLESTWEK 32 (37)
T ss_dssp CTTSCEEEEETTTTEEESSC
T ss_pred CCCCCEEEEECCCCCEEecC
Confidence 35688888888899999976
No 10
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=25.92 E-value=16 Score=21.95 Aligned_cols=20 Identities=15% Similarity=-0.007 Sum_probs=15.4
Q ss_pred EECCEEEEEEeecCcchhhh
Q 022978 238 EREGYLYSISASTLGKQWDE 257 (289)
Q Consensus 238 v~~GkLYtl~~qa~EkrW~k 257 (289)
-..|+.|=++..+.+.+|++
T Consensus 7 ~~~g~~YYyN~~T~~s~We~ 26 (27)
T 1e0n_A 7 HENGRPLYYNAEQKTKLHYP 26 (27)
T ss_dssp ESSSSEEEEETTTTEEESSC
T ss_pred CCCCCeEEEECCCCCEeccC
Confidence 35678888888888888863
No 11
>3ld7_A LIN0431 protein; DUF1312, PF07009, LKR112, NESG, structural genomics, PSI-2, protein structure initiative; 1.55A {Listeria innocua}
Probab=24.29 E-value=2.4e+02 Score=21.65 Aligned_cols=54 Identities=6% Similarity=-0.162 Sum_probs=32.2
Q ss_pred eeCCeeeEEEEEEEecC-CCCCCCCCCCcceEEEEEEEECCEEEEEEeecCcchhhhh
Q 022978 202 KVDGEPYWFYEYLIRKS-PTNLGQEPNLYRHYVASTAEREGYLYSISASTLGKQWDEM 258 (289)
Q Consensus 202 ~~dGk~YY~~Ey~v~~~-p~~~a~~~e~~RH~La~~tv~~GkLYtl~~qa~EkrW~k~ 258 (289)
.+||+.|+.|.+.-..- -+....+.. +.. .++-++||+.....+.||++.=-++
T Consensus 13 ~vdGk~~~~i~L~~~~~~~~~~i~~~~-G~~--n~ieI~dg~vrv~es~CPdkiCv~~ 67 (101)
T 3ld7_A 13 SQNGKVIREIPLTGHKGNEQFTIKGKG-AQY--NLMEVDGERIRIKEDNSPDQVGVKM 67 (101)
T ss_dssp EETTEEEEEEECTTCBSEEEEEEECST-TCE--EEEEEETTEEEEEEECCSSCHHHHH
T ss_pred EECCEEEEEEECCCCCCCEEEEEEcCC-CCE--EEEEEECCEEEEEECCCCCcccccC
Confidence 45899999886531000 000001111 222 4778999999999999999864443
No 12
>3hlz_A Uncharacterized protein BT_1490; NP_810393.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.77 E-value=30 Score=31.44 Aligned_cols=18 Identities=17% Similarity=0.386 Sum_probs=16.6
Q ss_pred ceeeeCCCceEEeccCCC
Q 022978 84 ASFVDEINAYTYLYPMEL 101 (289)
Q Consensus 84 ~~~~D~~dGYsF~YP~~W 101 (289)
++|+.++-=||..||++|
T Consensus 5 kk~ISPgaWfs~~yP~~W 22 (269)
T 3hlz_A 5 KKFISPGAWFSMNYPSDW 22 (269)
T ss_dssp EEEECGGGCEEEEECTTC
T ss_pred ceeecCCceeEEecCCCc
Confidence 578999999999999999
Done!