BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022980
(289 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RX71|BAG4_ARATH BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana
GN=BAG4 PE=1 SV=1
Length = 269
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 197/280 (70%), Gaps = 19/280 (6%)
Query: 16 NNNNEQVDWEMRPGGMLVQRRDDD-NYDH---QDGAAASVSGGPVIRINVARGPSQYEVH 71
+N+ E+ +WE+RPGGMLVQRRDD + DH QD +AS + IRI V+ G S +++H
Sbjct: 3 HNSTEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLH 62
Query: 72 VPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNK 131
+ A +TFGD+KKA+ +KTGL+ E K+LFRG E++D E L +G+KD SK++++ E TNK
Sbjct: 63 ISAHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVEDTNK 122
Query: 132 --EKKPKEVKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKV 189
E++P V ++EM KA+ A+ V EVDKLS+RV +LEVAVNGGT+V
Sbjct: 123 RVEQQPPVV-------------TKEMEKAIAAVNAVTGEVDKLSDRVVALEVAVNGGTQV 169
Query: 190 PSEELDTSAELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINSNPFCDS 249
E D +AELLM++LLKLDGIEAEG+AKVQRK EVRR+Q E +D LKA SNPF D
Sbjct: 170 AVREFDMAAELLMRQLLKLDGIEAEGDAKVQRKAEVRRIQNLQEAVDKLKARCSNPFVDQ 229
Query: 250 SNAIKVVTQWETFDSGMGSLNPPPLAPSSTTINQDWERFD 289
S A V T+WE+F +G+GSLNPPP A S + QDWE+FD
Sbjct: 230 SKAAAVSTEWESFGNGVGSLNPPPPASPSANVTQDWEKFD 269
>sp|Q0WUQ1|BAG1_ARATH BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana
GN=BAG1 PE=1 SV=1
Length = 342
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 140/221 (63%), Gaps = 17/221 (7%)
Query: 23 DWEMRPGGMLVQRRDDDNYDHQDGAAASVSGGPVIRINVARGPSQYEVHVPARSTFGDLK 82
D E+RPGGMLVQ+R+ D +IR+ + G +E+++ +++FG+LK
Sbjct: 39 DLEIRPGGMLVQKRNPDLDPVGPPPPP------MIRVRIKYGAVYHEINISPQASFGELK 92
Query: 83 KAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNKEKKPKEVKDSP 142
K ++ TG+ Q+QK++++ KE++ LDVSG+KDKSK++L+E+ ++EK+ E++
Sbjct: 93 KMLTGPTGIHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKRFLEMR--- 149
Query: 143 EKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLM 202
+ AK KA +AI+ + EVD+L RV++ E+ G K+ ++L T ELLM
Sbjct: 150 ----KIAKTE----KASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIELLM 201
Query: 203 KELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINS 243
EL+KLD I AEG+ K+QRK +V+RVQ + ETLD LK NS
Sbjct: 202 NELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKNS 242
>sp|Q9LYP4|BAG3_ARATH BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana
GN=BAG3 PE=1 SV=1
Length = 303
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 139/240 (57%), Gaps = 21/240 (8%)
Query: 4 MKKNSKNDSSNNNNNNEQVDWEMRPGGMLVQRRDDDNYDHQDGAAASVSGGPVIRINVAR 63
MK N+ S +WE RPGGM+VQRR D N D V R+ V
Sbjct: 2 MKMNTGTSPSVIGGGTSGNEWESRPGGMVVQRRTDQNSDVPR----------VFRVRVKY 51
Query: 64 GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVL 123
G +E+++ ++S+FG+LKK +S++ GL ++ KVL++ KE++ LD+ G+KD+SK++
Sbjct: 52 GSVYHEININSQSSFGELKKMLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLV 111
Query: 124 LLEELTNKEKKPKEVKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAV 183
+ KE S EK+ + + + KA ++I+ + EVD+L+ +V++ E +
Sbjct: 112 V-----------KEDPISQEKRLLAKRKNAAIEKASKSISDISFEVDRLAGQVSAFETVI 160
Query: 184 NGGTKVPSEELDTSAELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINS 243
N G KV + L E+LM +LL+LD I A+G+ K+ RK +V+RVQK+ E LD LK NS
Sbjct: 161 NKGGKVEEKSLVNLIEMLMNQLLRLDAIIADGDVKLMRKMQVQRVQKYVEALDLLKVKNS 220
>sp|Q0WPX7|BAG2_ARATH BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana
GN=BAG2 PE=2 SV=1
Length = 285
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 161/297 (54%), Gaps = 56/297 (18%)
Query: 23 DWEMRPGGMLVQRRDDDNYDHQDGAAASVSGGPVIRINVARGPSQYEVHVPARSTFGDLK 82
+ E+RPGGM+VQ+R D ++SV G IR+ V G +E+ + ++STFG+LK
Sbjct: 15 EMELRPGGMVVQKRTDH--------SSSVPRG--IRVRVKYGSVHHEISINSQSTFGELK 64
Query: 83 KAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNKEKKPKEVKDSP 142
K +S TG+ Q+ +++++ KE++ LD+SG+KD+SK++L+E+ ++EK+ E++
Sbjct: 65 KILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIA 124
Query: 143 EKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLM 202
K+ K+ +AI+ + +V++L+ ++++ + + G KV + L+ E+LM
Sbjct: 125 TKE-----------KSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEMLM 173
Query: 203 KELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINSN------------------ 244
+L+KLD I +G+ K+++K + R+ K+ E LD LK NS
Sbjct: 174 NQLVKLDAISGDGDVKLKKKMQEERLHKYVEALDLLKIKNSRQPQTKPKPQYKEREMLTF 233
Query: 245 -------PFCDSSN-AIKVVTQWETFDSGMGS---LNPP-PLAPSSTTINQDWERFD 289
P SS+ + + T+WETFDS S L P P+ P WE F+
Sbjct: 234 YEEASRKPTASSSSPPVIITTRWETFDSSSASTATLQPVRPVHPKF-----KWELFN 285
>sp|Q9JLV1|BAG3_MOUSE BAG family molecular chaperone regulator 3 OS=Mus musculus GN=Bag3
PE=1 SV=2
Length = 577
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 169 VDKLSERVASLEVAVNG--GTKVPSEELDTSAELLMKELLKLDGIEAEGEAKVQ--RKTE 224
V+ + E+V LE AV+ G K + L E L KELL LD ++ EG A V+ R+
Sbjct: 430 VEAILEKVQGLEQAVDSFEGKKTDKKYLMIE-EYLTKELLALDSVDPEGRADVRQARRDG 488
Query: 225 VRRVQKFHETLDNLKAIN 242
VR+VQ E L+ KAI+
Sbjct: 489 VRKVQTILEKLEQ-KAID 505
>sp|Q60739|BAG1_MOUSE BAG family molecular chaperone regulator 1 OS=Mus musculus GN=Bag1
PE=1 SV=3
Length = 355
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 80 DLKKAISEKTGLDPQEQKVLFRGKE-KEDNEHLDVSGMKDKSKVLLLEELTNKE-----K 133
DL + + E TG+ QK++F+GK KE L GM++ +V+L+ E +N E K
Sbjct: 182 DLAQLVEEATGVPLPFQKLIFKGKSLKEMETPLSALGMQNGCRVMLIGEKSNPEEEVELK 241
Query: 134 KPKEVKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEE 193
K K+++ S EK A +E+ K L I + +E + L+ V
Sbjct: 242 KLKDLEVSAEK---IANHLQELNKELSGIQQGFLAKELQAEALCKLDRKVKA-------- 290
Query: 194 LDTSAELLMKELLKLDGI---EAEGEAKVQRKTEVRRVQKFHETLDNL 238
+ E MK L ++D + E +++++RK V++VQ F D +
Sbjct: 291 ---TIEQFMKILEEIDTMVLPEQFKDSRLKRKNLVKKVQVFLAECDTV 335
>sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3 OS=Homo sapiens GN=BAG3
PE=1 SV=3
Length = 575
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 169 VDKLSERVASLEVAVNG--GTKVPSEELDTSAELLMKELLKLDGIEAEGEAKVQ--RKTE 224
V+ + E+V LE AV+ G K + L E L KELL LD ++ EG A V+ R+
Sbjct: 425 VEAILEKVQGLEQAVDNFEGKKTDKKYLMIE-EYLTKELLALDSVDPEGRADVRQARRDG 483
Query: 225 VRRVQKFHETLDNLKAIN 242
VR+VQ E L+ KAI+
Sbjct: 484 VRKVQTILEKLEQ-KAID 500
>sp|Q78JW9|UBFD1_MOUSE Ubiquitin domain-containing protein UBFD1 OS=Mus musculus GN=Ubfd1
PE=1 SV=2
Length = 368
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 66 SQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKED 107
++++V VP ST +LK+ I TGL P QKV+++G ED
Sbjct: 154 TKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPED 195
>sp|B0K019|BAG1_RAT BAG family molecular chaperone regulator 1 OS=Rattus norvegicus
GN=Bag1 PE=2 SV=1
Length = 358
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 55 PVIRINVARGPSQYEVHVPARS-----TFGDLKKAISEKTGLDPQEQKVLFRGKE-KEDN 108
P + + V +Y++ V + DL + + E TG+ QK++F+GK KE
Sbjct: 155 PTLSVVVTHSNERYDLLVTPQQGNSEPIVQDLAQLVEEATGVPLPFQKLIFKGKSLKEME 214
Query: 109 EHLDVSGMKDKSKVLLLEELTNKEKKP--KEVKDSPEKKHEYAKDSEEMRKAL----QAI 162
L GM++ +V+L+ E +N E++ K++KD + A EE+ K L Q
Sbjct: 215 TPLSALGMQNGCRVMLIGEKSNPEEEAELKKLKDLEVSVEKTANHLEELNKELSDIQQGF 274
Query: 163 AGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGIEAEGEAKVQRK 222
+ + L ++ + K+ EE+DT +++ E K +++++RK
Sbjct: 275 LAKELQAEALCRLDRKIKATIEQFMKI-LEEIDT---MVLPENFK--------DSRLKRK 322
Query: 223 TEVRRVQKFHETLDNL 238
V++VQ F D +
Sbjct: 323 NLVKKVQVFLAECDTV 338
>sp|O14562|UBFD1_HUMAN Ubiquitin domain-containing protein UBFD1 OS=Homo sapiens GN=UBFD1
PE=1 SV=2
Length = 309
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 48 AASVSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKED 107
A +G ++ + + ++++V P ST +LK+ I TGL P QKV+++G ED
Sbjct: 77 AGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPED 136
>sp|Q54L35|NED82_DICDI NEDD8-like protein 2 OS=Dictyostelium discoideum GN=nedd8l2 PE=3
SV=1
Length = 80
Score = 35.8 bits (81), Expect = 0.41, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 81 LKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE 127
+K +I G++PQEQK++F GK +D L G+KD S + +L E
Sbjct: 27 IKNSIRIMEGINPQEQKLIFDGKVLKDTSTLKSCGIKDGSTISVLFE 73
>sp|Q826F2|CLPB2_STRAW Chaperone protein ClpB 2 OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=clpB2 PE=3 SV=1
Length = 879
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 46 GAA-ASVSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKE 104
GAA ++ G +++ +ARG E+H+ +T + +K I + L+ + Q+VL
Sbjct: 292 GAAEGAMDAGNMLKPMLARG----ELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPS 347
Query: 105 KEDNEHLDVSGMKDKSKVLLLEELTNKEKKPKEVKDSPEKKHEYAKDSEEMRKAL----Q 160
ED + + G++++ LE + + + + H Y D KA+ +
Sbjct: 348 VEDTISI-LRGLRER-----LEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDE 401
Query: 161 AIAGVR-------AEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGIEA 213
A A +R AE+D+++ RV LE+ +K T E L +EL L G
Sbjct: 402 ACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKESDPASKTRLEELRRELADLRG--- 458
Query: 214 EGEAKVQR----KTEVRRVQKFHETLDNLK 239
E +AK + + +RRVQ+ + L+ ++
Sbjct: 459 EADAKHAQWEAERQAIRRVQELRQELEQVR 488
>sp|Q99933|BAG1_HUMAN BAG family molecular chaperone regulator 1 OS=Homo sapiens GN=BAG1
PE=1 SV=4
Length = 345
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 30/197 (15%)
Query: 57 IRINVARGPSQYEVHVPARS-----TFGDLKKAISEKTGLDPQEQKVLFRGKE-KEDNEH 110
+ + V ++++HV ++ DL + + E G+ QK++F+GK KE
Sbjct: 144 LTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETP 203
Query: 111 LDVSGMKDKSKVLLLEELTNKEKKPKEVKDSPEKKH------EYAKDSEEMRKALQAIAG 164
L G++D +V+L+ K+ P+E + + KH + A EE+ K L I
Sbjct: 204 LSALGIQDGCRVMLI----GKKNSPQEEVELKKLKHLEKSVEKIADQLEELNKELTGIQQ 259
Query: 165 VRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGI---EAEGEAKVQR 221
D +E + L+ V + E MK L ++D + E +++++R
Sbjct: 260 GFLPKDLQAEALCKLDRRVKA-----------TIEQFMKILEEIDTLILPENFKDSRLKR 308
Query: 222 KTEVRRVQKFHETLDNL 238
K V++VQ F D +
Sbjct: 309 KGLVKKVQAFLAECDTV 325
>sp|Q3E7K8|UBQ12_ARATH Polyubiquitin 12 OS=Arabidopsis thaliana GN=UBQ12 PE=3 SV=1
Length = 230
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 53 GGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
GG I + G + + V + T +LK I +K G+ P +Q+++F GK+ ED L
Sbjct: 75 GGMQIFVKTLTGKT-ITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
Length = 457
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 48 AASVSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKED 107
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 298 VVRLRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Query: 108 NEHL 111
L
Sbjct: 357 GRTL 360
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 LDVSGMKDKSKVLLLEEL 128
L ++ +S + L+ L
Sbjct: 284 LSDYNIQKESTLHLVVRL 301
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 377 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 111 L 111
L
Sbjct: 436 L 436
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V A T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
Length = 838
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 301 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 111 L 111
L
Sbjct: 360 L 360
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 453 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511
Query: 111 L 111
L
Sbjct: 512 L 512
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 529 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587
Query: 111 L 111
L
Sbjct: 588 L 588
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 605 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663
Query: 111 L 111
L
Sbjct: 664 L 664
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 681 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739
Query: 111 L 111
L
Sbjct: 740 L 740
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 757 LRGGMQIFVKTLTGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815
Query: 111 L 111
L
Sbjct: 816 L 816
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 377 LRGGMQIFVKTLIGKT-ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 111 L 111
L
Sbjct: 436 L 436
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V A T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|Q5R4T1|UBL4A_PONAB Ubiquitin-like protein 4A OS=Pongo abelii GN=UBL4A PE=2 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----L 125
+ VP LK+ +SEK + ++Q++LF+GK D + L + SK+ L L
Sbjct: 15 LQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 126 EELTNKEKKPKEVKDSP 142
E++ +E + + + DSP
Sbjct: 75 EKVLLEEGEAQRLADSP 91
>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
Length = 305
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K+ I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K+ I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K+ I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K+ I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P11441|UBL4A_HUMAN Ubiquitin-like protein 4A OS=Homo sapiens GN=UBL4A PE=1 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----L 125
+ VP LK+ +SEK + ++Q++LF+GK D + L + SK+ L L
Sbjct: 15 LQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 126 EELTNKEKKPKEVKDSP 142
E++ +E + + + DSP
Sbjct: 75 EKVLLEEGEAQRLADSP 91
>sp|B7NZQ9|UBL4A_RABIT Ubiquitin-like protein 4A OS=Oryctolagus cuniculus GN=UBL4A PE=3
SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----L 125
+ VP LK+ +SEK + ++Q++LF+GK D + L + SK+ L L
Sbjct: 15 LQVPEDEQVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 126 EELTNKEKKPKEVKDSP 142
E++ E + + DSP
Sbjct: 75 EKVLLAEGTARRLADSP 91
>sp|B0KWT6|UBL4A_CALJA Ubiquitin-like protein 4A OS=Callithrix jacchus GN=UBL4A PE=3 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----L 125
+ VP LK+ +SEK + ++Q++LF+GK D + L + SK+ L L
Sbjct: 15 LQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 126 EELTNKEKKPKEVKDSP 142
E++ +E + + DSP
Sbjct: 75 EKVLLEEGTGRRLADSP 91
>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
Length = 381
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V A T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 301 LRGGMQIFVKTLTGKT-ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 111 L 111
L
Sbjct: 360 L 360
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 72 VPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
V A T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|B1MTV8|UBL4A_CALMO Ubiquitin-like protein 4A OS=Callicebus moloch GN=UBL4A PE=3 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----L 125
+ VP LK+ +SEK + ++Q++LF+GK D + L + SK+ L L
Sbjct: 15 LQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPL 74
Query: 126 EELTNKEKKPKEVKDSP 142
E++ +E + + DSP
Sbjct: 75 EKVLLEEGAGRRLADSP 91
>sp|P0CG63|UBI4P_YEAST Polyubiquitin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=UBI4 PE=1 SV=1
Length = 381
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 301 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 111 L 111
L
Sbjct: 360 L 360
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG73|UBI1P_CANAX Polyubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1
Length = 229
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 LDVSGMKDKSKVLLLEEL 128
L ++ +S + L+ L
Sbjct: 208 LSDYNIQKESTLHLVLRL 225
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 53 GGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLD 112
GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 75 GGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 113 VSGMKDKSKVLLLEEL 128
++ +S + L+ L
Sbjct: 134 DYNIQKESTLHLVLRL 149
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG72|UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ubi4 PE=1 SV=1
Length = 382
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 301 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 111 L 111
L
Sbjct: 360 L 360
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG74|UBI4P_CANAX Polyubiquitin OS=Candida albicans GN=UBI4 PE=1 SV=1
Length = 305
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG75|UBI4P_KLULA Polyubiquitin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ubi4
PE=1 SV=1
Length = 381
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 73 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 111 L 111
L
Sbjct: 132 L 132
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 149 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 111 L 111
L
Sbjct: 208 L 208
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 225 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 111 L 111
L
Sbjct: 284 L 284
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEH 110
+ GG I + G + + V + T ++K I +K G+ P +Q+++F GK+ ED
Sbjct: 301 LRGGMQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 111 L 111
L
Sbjct: 360 L 360
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P14799|RS27A_NEUCR Ubiquitin-40S ribosomal protein S27a OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ubi-3 PE=1 SV=4
Length = 154
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 125
+ V + T ++K+ I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 15 LEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|P05759|RS27A_YEAST Ubiquitin-40S ribosomal protein S31 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPS31 PE=1 SV=3
Length = 152
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 72 VPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 125
V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|P51431|R27AB_ORYSJ Ubiquitin-40S ribosomal protein S27a-2 OS=Oryza sativa subsp.
japonica GN=RPS27AB PE=2 SV=3
Length = 155
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|Q9ARZ9|R27AA_ORYSJ Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa subsp.
japonica GN=RPS27AA PE=2 SV=1
Length = 155
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P0CG86|RS271_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1
PE=3 SV=1
Length = 155
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|Q889C2|CLPB_PSESM Chaperone protein ClpB OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=clpB PE=3 SV=1
Length = 854
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 34/203 (16%)
Query: 49 ASVSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDN 108
S+ G +++ +ARG E+H +T + ++ I + L+ + QKVL +ED
Sbjct: 291 GSMDAGNMLKPALARG----ELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDT 346
Query: 109 EHLDVSGMKDKSKVLLLEELTNKEKKPKEVKDSPEKKHEYAKDSEEMRKAL----QAIAG 164
+ + G+K++ +V +T+ + + + H Y D + KA+ +A +
Sbjct: 347 IAI-LRGLKERYEVHHKVAITD-----GAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR 400
Query: 165 VRAEV-------DKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKL--------- 208
+R E+ D+L R+ L+V K E E L +E+++L
Sbjct: 401 IRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEE 460
Query: 209 ----DGIEAEGEAKVQRKTEVRR 227
+ E G A++Q+K E R
Sbjct: 461 IWTSEKAEVTGSAQIQQKIEQSR 483
>sp|P0C016|RS27A_SCHPO Ubiquitin-40S ribosomal protein S27a OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubi3 PE=1 SV=2
Length = 150
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG87|RS272_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB2
PE=3 SV=1
Length = 155
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P15357|RS27A_DROME Ubiquitin-40S ribosomal protein S27a OS=Drosophila melanogaster
GN=RpS27A PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62981|RS27A_SOLTU Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3
PE=2 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P62980|RS27A_SOLLC Ubiquitin-40S ribosomal protein S27a OS=Solanum lycopersicum
GN=UBI3 PE=3 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P27923|RS27A_MAIZE Ubiquitin-40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=2 SV=2
Length = 155
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 72 VPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 17 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=2
Length = 155
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
+ V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P0C8R3|RS27B_SCHPO Ubiquitin-40S ribosomal protein S27b OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubi5 PE=1 SV=2
Length = 150
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHL 111
+ V + T ++K I +K G+ P +Q+++F GK+ ED L
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P68200|RS27A_ICTPU Ubiquitin-40S ribosomal protein S27a OS=Ictalurus punctatus
GN=rps27a PE=2 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62979|RS27A_HUMAN Ubiquitin-40S ribosomal protein S27a OS=Homo sapiens GN=RPS27A PE=1
SV=2
Length = 156
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62978|RS27A_CAVPO Ubiquitin-40S ribosomal protein S27a OS=Cavia porcellus GN=RPS27A
PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62992|RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a OS=Bos taurus GN=RPS27A PE=1
SV=2
Length = 156
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P79781|RS27A_CHICK Ubiquitin-40S ribosomal protein S27a OS=Gallus gallus GN=RPS27A
PE=2 SV=3
Length = 156
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P68203|RS27A_SPOFR Ubiquitin-40S ribosomal protein S27a OS=Spodoptera frugiperda PE=2
SV=2
Length = 156
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 77 TFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 128
T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P69061|RS27A_KLULA Ubiquitin-40S ribosomal protein S27a OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ubi3 PE=1 SV=2
Length = 150
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 72 VPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 125
V + T ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.126 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,484,485
Number of Sequences: 539616
Number of extensions: 4957762
Number of successful extensions: 63442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 788
Number of HSP's that attempted gapping in prelim test: 56977
Number of HSP's gapped (non-prelim): 6721
length of query: 289
length of database: 191,569,459
effective HSP length: 116
effective length of query: 173
effective length of database: 128,974,003
effective search space: 22312502519
effective search space used: 22312502519
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)