Query         022980
Match_columns 289
No_of_seqs    224 out of 791
Neff          5.4 
Searched_HMMs 13730
Date          Mon Mar 25 14:21:06 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022980.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022980hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2bwfa1 d.15.1.1 (A:2-74) DSK2  99.8 5.7E-19 4.2E-23  130.9  10.7   72   56-127     1-72  (73)
  2 d1wgga_ d.15.1.1 (A:) Ubiquiti  99.8 5.5E-19   4E-23  137.9  10.5   81   53-134     4-85  (96)
  3 d1wxva1 d.15.1.1 (A:7-87) Bag-  99.8 7.5E-19 5.4E-23  133.1   9.5   73   57-129     2-80  (81)
  4 d1m7ka_ a.7.7.1 (A:) Silencer   99.8 8.1E-19 5.9E-23  133.7   8.9   74  158-237     4-79  (81)
  5 d1yqba1 d.15.1.1 (A:15-98) Ubi  99.8 1.8E-18 1.3E-22  131.5  10.8   78   53-130     4-81  (84)
  6 d1v5ta_ d.15.1.1 (A:) 8430435i  99.8 1.2E-18 8.7E-23  134.0   9.6   79   52-130     3-85  (90)
  7 d1v86a_ d.15.1.1 (A:) hypothet  99.8   1E-18 7.4E-23  136.1   8.9   78   51-129    12-89  (95)
  8 d1uk5a_ a.7.7.1 (A:) BAG-famil  99.8 1.2E-18   9E-23  139.8   9.4   76  158-239    28-105 (111)
  9 d1ugoa_ a.7.7.1 (A:) BAG-famil  99.7 8.5E-19 6.2E-23  138.2   7.3   75  157-237    15-91  (99)
 10 d1j8ca_ d.15.1.1 (A:) Ubiquiti  99.7 4.1E-18   3E-22  134.1  11.3   75   52-126    28-102 (103)
 11 d1wx8a1 d.15.1.1 (A:8-90) 4931  99.7 4.8E-18 3.5E-22  128.9   8.1   75   53-127     7-81  (83)
 12 d1z2ma2 d.15.1.1 (A:79-154) In  99.7 4.5E-17 3.3E-21  121.0  10.2   72   55-126     2-74  (76)
 13 d1m94a_ d.15.1.1 (A:) Ubiquiti  99.7 3.8E-17 2.8E-21  121.1   8.9   70   56-125     1-71  (73)
 14 d1wh3a_ d.15.1.1 (A:) 2'-5'-ol  99.7 8.7E-17 6.3E-21  122.7  11.1   75   53-127     4-79  (87)
 15 d2zeqa1 d.15.1.1 (A:1-78) Ubiq  99.7 4.9E-17 3.5E-21  122.1   9.3   72   57-128     3-75  (78)
 16 d1bt0a_ d.15.1.1 (A:) Rub1 {Mo  99.7 6.5E-17 4.7E-21  119.4   9.3   70   57-126     1-71  (73)
 17 d1ttna1 d.15.1.1 (A:21-100) De  99.7 1.2E-16 8.5E-21  120.2  10.8   74   54-127     1-75  (80)
 18 d1ogwa_ d.15.1.1 (A:) Ubiquiti  99.7 9.1E-17 6.6E-21  119.5   9.6   71   57-127     1-72  (76)
 19 d1z2ma1 d.15.1.1 (A:3-78) Inte  99.7 1.7E-16 1.3E-20  118.3   9.8   71   58-128     2-75  (76)
 20 d1oqya4 d.15.1.1 (A:1-77) Ubiq  99.7 7.8E-17 5.7E-21  120.2   7.8   71   56-126     2-76  (77)
 21 d1uh6a_ d.15.1.1 (A:) Ubiquiti  99.6 3.2E-16 2.3E-20  123.4   9.2   73   53-125    25-98  (100)
 22 d2faza1 d.15.1.1 (A:1-76) Ubiq  99.6 5.7E-16 4.2E-20  115.8   9.9   71   57-127     1-74  (76)
 23 d1wy8a1 d.15.1.1 (A:8-83) Ubiq  99.6 7.9E-16 5.8E-20  115.0  10.5   72   57-128     1-75  (76)
 24 d1wx9a1 d.15.1.1 (A:8-80) Larg  99.6 2.1E-16 1.6E-20  116.9   7.0   69   57-126     1-70  (73)
 25 d1uela_ d.15.1.1 (A:) Ubiquiti  99.6   2E-15 1.4E-19  116.6  11.2   71   57-127     1-75  (95)
 26 d1v5oa_ d.15.1.1 (A:) 1700011n  99.6   2E-15 1.4E-19  118.9  10.6   74   56-129     7-86  (102)
 27 d1zkha1 d.15.1.1 (A:1-86) Spli  99.6 5.6E-15 4.1E-19  112.8   9.1   64   64-127    20-83  (86)
 28 d1wgha_ d.15.1.1 (A:) Ubiquiti  99.5 1.2E-14 8.5E-19  117.1  10.9   78   52-129    12-100 (116)
 29 d1wiaa_ d.15.1.1 (A:) Ubiquiti  99.5 2.3E-14 1.7E-18  111.5  11.3   73   53-128     4-78  (95)
 30 d1wjua_ d.15.1.1 (A:) NEDD8 ul  99.5 9.6E-15   7E-19  114.5   7.3   74   55-128    16-92  (100)
 31 d1v2ya_ d.15.1.1 (A:) Ubiquiti  99.5 5.2E-15 3.8E-19  116.9   5.5   76   53-128     4-96  (105)
 32 d1se9a_ d.15.1.1 (A:) Hypothet  99.5   1E-13 7.3E-18  109.2  11.9   77   54-130     5-96  (101)
 33 d1we6a_ d.15.1.1 (A:) Splicing  99.5   2E-14 1.4E-18  114.9   6.8   73   55-127    28-103 (111)
 34 d1hx1b_ a.7.7.1 (B:) BAG-famil  99.5   1E-13 7.3E-18  110.3   9.8   97  141-241     3-108 (112)
 35 d1t7sa_ a.7.7.1 (A:) BAG-famil  99.5   6E-14 4.4E-18  113.6   7.9  107  120-241     1-123 (129)
 36 d1v6ea_ d.15.1.1 (A:) Ubiquiti  99.4 1.6E-13 1.2E-17  106.5   8.9   75   54-128     5-88  (95)
 37 d2c9wb1 d.15.1.1 (B:2-104) Elo  99.4 1.7E-13 1.3E-17  108.1   8.6   65   56-120     1-65  (103)
 38 d1wgda_ d.15.1.1 (A:) Homocyst  99.4 1.5E-12 1.1E-16  100.4   9.9   74   55-128     6-86  (93)
 39 d1wjna_ d.15.1.1 (A:) Tubulin-  99.4 1.3E-12 9.8E-17  101.3   9.3   75   52-126     5-91  (97)
 40 d1euvb_ d.15.1.1 (B:) SUMO-1 (  99.3   2E-12 1.5E-16   96.4   8.6   73   54-126     2-74  (79)
 41 d1t0ya_ d.15.1.1 (A:) Ubiquiti  99.3 2.3E-12 1.7E-16   98.7   9.2   74   55-128     3-85  (90)
 42 d1x1ma1 d.15.1.1 (A:8-101) Ubi  99.1 1.5E-11 1.1E-15   95.4   5.3   58   70-127    32-92  (94)
 43 d2uyzb1 d.15.1.1 (B:20-96) SUM  99.0 7.7E-10 5.6E-14   81.7   8.4   71   56-126     2-73  (77)
 44 d1wf9a1 d.15.1.1 (A:8-101) NPL  98.3 3.9E-07 2.8E-11   69.7   6.1   69   59-127     3-87  (94)
 45 d1wm3a_ d.15.1.1 (A:) SUMO-2 {  98.2   4E-06 2.9E-10   60.6   8.6   68   57-124     2-70  (72)
 46 d2al3a1 d.15.1.2 (A:10-85) Tet  97.3 0.00076 5.5E-08   49.3   8.7   64   64-127     9-72  (76)
 47 d1h8ca_ d.15.1.2 (A:) Fas-asso  96.1   0.014   1E-06   42.0   8.4   71   54-125     3-79  (82)
 48 d1vjka_ d.15.3.1 (A:) Molybdop  95.8   0.031 2.3E-06   40.1   9.4   66   56-126     1-85  (88)
 49 d2cr5a1 d.15.1.2 (A:8-103) UBX  95.4   0.058 4.2E-06   39.5   9.5   73   53-126    13-90  (96)
 50 d1ip9a_ d.15.2.2 (A:) Bud emer  94.4   0.059 4.3E-06   39.2   7.0   47   53-101     9-55  (85)
 51 d1i42a_ d.15.1.2 (A:) p47 {Rat  94.1   0.091 6.6E-06   38.2   7.7   69   54-123    12-85  (89)
 52 d1wj4a_ d.15.1.2 (A:) Hypothet  93.4    0.16 1.2E-05   39.0   8.4   74   52-126    39-118 (124)
 53 d2bkfa1 d.15.2.2 (A:1-85) Next  91.6     0.2 1.5E-05   36.7   6.3   45   54-100     2-48  (85)
 54 d1oeya_ d.15.2.2 (A:) Neutroph  90.2    0.31 2.3E-05   35.4   6.0   44   57-101     6-49  (82)
 55 d1xo3a_ d.15.3.3 (A:) C9orf74   87.9    0.46 3.4E-05   34.9   5.8   69   55-126     3-96  (101)
 56 d1wgya_ d.15.1.5 (A:) Rap guan  79.4       2 0.00015   32.2   6.1   76   52-127     5-86  (104)
 57 d1wmha_ d.15.2.2 (A:) Protein   73.9     5.1 0.00037   28.7   6.7   39   56-94      1-39  (83)
 58 d1fm0d_ d.15.3.1 (D:) Molybdop  72.9       4 0.00029   28.2   6.0   57   64-126    15-76  (81)
 59 d1y8xb1 c.111.1.2 (B:349-440)   67.1     3.7 0.00027   30.1   4.8   58   69-126     4-79  (92)
 60 d1ef1a3 d.15.1.4 (A:4-87) Moes  52.0      33  0.0024   23.7   8.6   68   56-123     1-74  (84)
 61 d1wgra_ d.15.1.5 (A:) Growth f  50.6      17  0.0012   25.9   6.0   68   56-124    11-89  (100)
 62 d1zud21 d.15.3.2 (2:2-66) Thia  49.7      30  0.0022   22.6   6.9   53   69-126     8-60  (65)
 63 d2c60a1 d.15.2.2 (A:43-122) Mi  48.8      21  0.0015   25.1   6.0   44   56-102     2-45  (80)
 64 d2nptb1 d.15.2.2 (B:42-123) Mi  47.6      23  0.0017   25.0   6.0   39   56-94      2-40  (82)
 65 d1f2ri_ d.15.2.1 (I:) Inhibito  46.0      49  0.0036   24.0   8.7   65   60-127    22-90  (100)
 66 d2i1sa1 d.343.1.1 (A:4-188) Hy  41.0      38  0.0027   26.4   7.3   31   66-96     19-49  (185)
 67 d1t3qa2 d.15.4.2 (A:7-87) Quin  37.6      17  0.0013   25.4   4.1   29   55-83      2-30  (81)
 68 d1h4ra3 d.15.1.4 (A:20-103) Me  37.6      58  0.0042   22.4   8.8   69   56-124     2-75  (84)
 69 d1v8ca1 d.15.3.1 (A:1-87) MoaD  37.0      42  0.0031   22.7   6.2   56   69-126    17-82  (87)
 70 d2qamt1 d.12.1.1 (T:1-93) Ribo  36.0      11 0.00077   27.2   2.7   42   65-106    27-69  (93)
 71 d1j0ga_ d.15.1.6 (A:) Hypothet  35.7      68  0.0049   22.6   8.3   61   66-126    23-85  (92)
 72 d1vlba2 d.15.4.2 (A:1-80) Alde  34.1      27   0.002   24.3   4.7   67   56-124     1-75  (80)
 73 d1vcsa1 a.47.2.1 (A:8-96) Vesi  32.5      37  0.0027   23.8   5.3   44  191-239     4-47  (89)
 74 d2zjrq1 d.12.1.1 (Q:2-94) Ribo  31.2      39  0.0028   24.0   5.2   57   66-125    22-79  (93)
 75 d1tygb_ d.15.3.2 (B:) Thiamin   30.1      63  0.0046   20.9   5.9   56   64-126     5-61  (65)
 76 d1ibxa_ d.15.2.1 (A:) Caspase-  29.2      65  0.0047   22.4   6.0   50   74-126    22-73  (81)
 77 d1ykhb1 a.252.1.1 (B:2-130) RN  27.7      54   0.004   24.5   5.8   24  216-239   102-125 (129)
 78 d1e7ua3 d.15.1.5 (A:143-321) P  27.6      88  0.0064   24.5   7.4   71   55-125    76-164 (179)
 79 d1c9fa_ d.15.2.1 (A:) Caspase-  25.7      58  0.0042   23.0   5.2   64   57-126    11-76  (87)
 80 d1d4ba_ d.15.2.1 (A:) Cell dea  24.7      54  0.0039   24.6   5.2   65   57-127    38-104 (122)
 81 d1amua_ e.23.1.1 (A:) Phenylal  24.2      42   0.003   28.6   5.1   54   70-126    17-80  (514)
 82 d1vqos1 d.12.1.1 (S:1-81) Ribo  21.7      60  0.0044   22.4   4.6   39   65-103    21-60  (81)
 83 d1fpoa2 a.23.1.1 (A:77-171) HS  21.4      27   0.002   24.5   2.7   16  198-213    13-31  (95)
 84 d1rwsa_ d.15.3.2 (A:) Hypothet  21.3     6.1 0.00045   27.3  -1.0   59   57-125     3-62  (68)
 85 d2hj1a1 d.15.3.4 (A:11-87) Hyp  20.4 1.2E+02   0.009   20.5   7.1   64   56-125     2-73  (77)
 86 d1nzea_ a.24.18.1 (A:) Oxygen-  20.2      83   0.006   22.7   5.4   68  163-233    39-109 (112)
 87 d3d32a1 d.15.1.3 (A:1-118) GAB  20.1      54  0.0039   24.2   4.3   46   69-114    50-96  (118)
 88 d1udxa3 d.242.1.1 (A:341-416)   20.1      25  0.0018   24.1   2.1   17  108-124    49-65  (76)

No 1  
>d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78  E-value=5.7e-19  Score=130.90  Aligned_cols=72  Identities=25%  Similarity=0.485  Sum_probs=69.5

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      +|+|+|++++.+|+|+|++++||.+||++|+..+|+|+++|+|+|+|+.++|+.+|++|||++|++|+|+.+
T Consensus         1 si~I~Vk~~~~~~~i~v~~~~tV~~lK~~I~~~~gip~~~qrLi~~Gk~L~D~~tL~~~~I~~g~~i~lV~~   72 (73)
T d2bwfa1           1 SLNIHIKSGQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESYHIQDGHSVHLVKS   72 (73)
T ss_dssp             EEEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBTGGGTCCTTCEEEEEEC
T ss_pred             CEEEEEEeCCeEEEEEECCCChHHHHHHHHHHHHCcChHHeEEEECCeEccCCCcHHHCCCCCCCEEEEEee
Confidence            489999999999999999999999999999999999999999999999999999999999999999999864


No 2  
>d1wgga_ d.15.1.1 (A:) Ubiquitin carboxyl-terminal hydrolase 14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77  E-value=5.5e-19  Score=137.87  Aligned_cols=81  Identities=21%  Similarity=0.316  Sum_probs=72.5

Q ss_pred             CCCcEEEEEEeCCeEE-EEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEeeCCCC
Q 022980           53 GGPVIRINVARGPSQY-EVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNK  131 (289)
Q Consensus        53 ~~~~I~V~Vk~g~~~~-~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~~~s~  131 (289)
                      ....|+|+|||++.+| .|+|++++||.+||++|++.+|||+++|||||+|+.++|+ +|.+|||++|++||||+.+...
T Consensus         4 ~s~~~~I~VK~~~~~~~~v~v~~~~tV~~lK~~i~~~~gvp~~~QkLi~~Gk~L~d~-tL~~~gi~~g~~i~lv~t~~~~   82 (96)
T d1wgga_           4 GSSGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNIKMKNGMTVLMMGSADAL   82 (96)
T ss_dssp             CCCEEEEEEEETTEEEEEEEEESSSCHHHHHHHHHHHTCCCTTTSCCEETTEECCSS-CCCSCCCCSSCEEECCCCCCCC
T ss_pred             CCCceEEEEEeCCCCEEEEEECCCCcHHHHHHHhhhhcCccceeeEEeecCcccCCC-cHHHCCCCCCCEEEEEeeCCcC
Confidence            4578999999977675 7999999999999999999999999999999999998875 7999999999999999876654


Q ss_pred             CCC
Q 022980          132 EKK  134 (289)
Q Consensus       132 e~k  134 (289)
                      ..+
T Consensus        83 ~~~   85 (96)
T d1wgga_          83 PEE   85 (96)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            443


No 3  
>d1wxva1 d.15.1.1 (A:7-87) Bag-family molecular chaperone regulator-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=7.5e-19  Score=133.14  Aligned_cols=73  Identities=25%  Similarity=0.470  Sum_probs=68.0

Q ss_pred             EEEEEEeCCeEEEEEec-----CCCcHHHHHHHHHHHhCCCCCCcEEEEcCeec-CCchhhhhcCCCCCCEEEEEeeCC
Q 022980           57 IRINVARGPSQYEVHVP-----ARSTFGDLKKAISEKTGLDPQEQKVLFRGKEK-EDNEHLDVSGMKDKSKVLLLEELT  129 (289)
Q Consensus        57 I~V~Vk~g~~~~~V~V~-----a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~l-dd~~~L~~~GVKdgskL~Lv~~~~  129 (289)
                      |+|+|+|++.+|+|+|+     +++||++||++|+..||+|+++|+|+|+|+.+ +|+.+|++|||++|++|+||+++.
T Consensus         2 i~i~V~~~~~~~~i~v~~~~~~~~~Tv~~LK~~I~~~tgvp~~~QkL~~~G~~L~~d~~tL~~~gi~~g~~i~lv~~~~   80 (81)
T d1wxva1           2 LTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIGKKN   80 (81)
T ss_dssp             EEEEEECSSSEEEEEECCCSSSSSCBHHHHHHHHHHHTCCCTTTCEEEETTEEECCSSSBHHHHTCCSSEEEEEESCCS
T ss_pred             EEEEEEECCeeEEEEEecCCCCCccHHHHHHHHHHHHHCcCHHHEEeeecCeEeCcCCCChHHCCCCCCCEEEEEEecC
Confidence            78999999999999996     46799999999999999999999999999996 678899999999999999998764


No 4  
>d1m7ka_ a.7.7.1 (A:) Silencer of death domains, Sodd (Bag4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=8.1e-19  Score=133.73  Aligned_cols=74  Identities=30%  Similarity=0.408  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhhhHHHHHHHHHhhcCCCCch--hHHHHHHHHHHHHHHHHHHH
Q 022980          158 ALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGIEAEG--EAKVQRKTEVRRVQKFHETL  235 (289)
Q Consensus       158 a~~aI~~i~~evd~La~~v~~~e~~~~~g~k~~eke~~~LsE~LM~~LLKLD~Ie~eG--daR~~RK~~VkrVQ~~Le~L  235 (289)
                      +++.|..|..+|+.|..+|+.|      ++++.+++|.+|+|+||++|||||+|+++|  ++|.+||.+|++||++|+.|
T Consensus         4 ~~~~I~~i~~~v~~l~~~V~~f------~g~~~dke~~~L~E~L~~~llkLD~Ie~~G~~~vR~~RK~~vk~vq~~l~~L   77 (81)
T d1m7ka_           4 SIKKIIHVLEKVQYLEQEVEEF------VGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQAILEKL   77 (81)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHC------CSCTTSHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH------cCCcccHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            3567888999999999999998      567899999999999999999999999999  68999999999999999999


Q ss_pred             HH
Q 022980          236 DN  237 (289)
Q Consensus       236 D~  237 (289)
                      |.
T Consensus        78 D~   79 (81)
T d1m7ka_          78 EK   79 (81)
T ss_dssp             HH
T ss_pred             hc
Confidence            96


No 5  
>d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=1.8e-18  Score=131.50  Aligned_cols=78  Identities=23%  Similarity=0.359  Sum_probs=73.1

Q ss_pred             CCCcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEeeCCC
Q 022980           53 GGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTN  130 (289)
Q Consensus        53 ~~~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~~~s  130 (289)
                      ++.+|+|+|++.+.+|.++|.+++||++||++|++.+|+||++|+|+|+|+.++|+.+|++|||++|++|+|+.++.+
T Consensus         4 ~~~~i~I~Vkt~~~~~~~~V~~~~tV~~lK~~i~~~~gi~~~~qrL~~~Gk~L~D~~tL~~y~i~~gsti~lv~r~~~   81 (84)
T d1yqba1           4 SPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKRQH   81 (84)
T ss_dssp             CTTEEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEEETTEECCTTSBHHHHTCCTTCEEEEEECCCC
T ss_pred             CCCEEEEEEEcCCCcEEEEECCCCcHHHHHHHHHHHHCcCchhEEEEEeeeeccccCcHHHcCCCCCCEEEEEECCCC
Confidence            456899999998889999999999999999999999999999999999999999999999999999999999976544


No 6  
>d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76  E-value=1.2e-18  Score=134.00  Aligned_cols=79  Identities=29%  Similarity=0.461  Sum_probs=73.6

Q ss_pred             CCCCcEEEEEEeCCeEEEE-EecCCCcHHHHHHHHHHHhCCCCCCcEEE---EcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           52 SGGPVIRINVARGPSQYEV-HVPARSTFGDLKKAISEKTGLDPQEQKVL---FRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        52 ~~~~~I~V~Vk~g~~~~~V-~V~a~sTvgdLK~~I~e~TGvpp~~QKLi---ykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      +..+.|.|+|||++++|.+ +|++++||.+||++|++.|||||++||||   |+|+.++|+.+|.+|||++|++|+||++
T Consensus         3 s~s~~~~i~Vk~~~~~~~i~~v~~~~tV~~LK~~i~~~t~vp~~~QkLi~~~~~Gk~L~D~~tL~~~~i~~g~~i~lv~s   82 (90)
T d1v5ta_           3 SGSSGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGT   82 (90)
T ss_dssp             CCCCSCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTTCEEESCEETTEECCTTSBHHHHTCCTTEEEEEECC
T ss_pred             CCCCcEEEEEEECCeEEEEEEeCCCCcHHHHHHHHHHHHcCCHHHhhhhhhccCCcCCCCcCcHHHcCCCCCCEEEEEee
Confidence            3567899999999999998 69999999999999999999999999999   6999999999999999999999999987


Q ss_pred             CCC
Q 022980          128 LTN  130 (289)
Q Consensus       128 ~~s  130 (289)
                      +.+
T Consensus        83 ~~~   85 (90)
T d1v5ta_          83 RES   85 (90)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            664


No 7  
>d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75  E-value=1e-18  Score=136.09  Aligned_cols=78  Identities=24%  Similarity=0.413  Sum_probs=72.3

Q ss_pred             CCCCCcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEeeCC
Q 022980           51 VSGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELT  129 (289)
Q Consensus        51 ~~~~~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~~~  129 (289)
                      ....+.|.|+|+|++++|+|+|++++||.+||++|++.+|||+++|||+|+|+ ++|+.+|++|||++|++|+||+...
T Consensus        12 ~~~~~~i~v~V~~~~k~~~i~v~~~~TV~~LK~~I~~~tgvp~~~q~Li~~g~-l~D~~tL~~~~I~~gs~i~lvgs~~   89 (95)
T d1v86a_          12 GVGKELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGL-VPEDKTLREIKVTSGAKIMVVGSTI   89 (95)
T ss_dssp             CCCCCCEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCSCSTTCCCBSSSB-CCSSSBHHHHCCCTTEEEEECCSSC
T ss_pred             CCCccEEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHhCCChhHEEEEeccc-ccCCCcHHHCCCCCCCEEEEEecCC
Confidence            34567899999999999999999999999999999999999999999999998 6778999999999999999998653


No 8  
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75  E-value=1.2e-18  Score=139.81  Aligned_cols=76  Identities=29%  Similarity=0.439  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhhhHHHHHHHHHhhcCCCCch--hHHHHHHHHHHHHHHHHHHH
Q 022980          158 ALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGIEAEG--EAKVQRKTEVRRVQKFHETL  235 (289)
Q Consensus       158 a~~aI~~i~~evd~La~~v~~~e~~~~~g~k~~eke~~~LsE~LM~~LLKLD~Ie~eG--daR~~RK~~VkrVQ~~Le~L  235 (289)
                      ++..|..|..+|+.|..+|..|      ++++.+++|++|+|+||++|||||+|+++|  ++|.+||.+|++||++|+.|
T Consensus        28 ~~~ki~~i~~~v~~L~~~V~~f------~g~~~dkey~~L~E~L~~~LlkLD~Ie~~G~~~vR~~RK~~vk~vQ~~l~~L  101 (111)
T d1uk5a_          28 GVLKVEAILEKVQGLEQAVDSF------EGKKTDKKYLMIEEYLTKELLALDSVDPEGRADVRQARRDGVRKVQTILEKL  101 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC------CSCSSSHHHHHHHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh------cCCcccHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            4556788888888898888887      688999999999999999999999999999  69999999999999999999


Q ss_pred             HHHH
Q 022980          236 DNLK  239 (289)
Q Consensus       236 D~lk  239 (289)
                      |...
T Consensus       102 D~~~  105 (111)
T d1uk5a_         102 EQKA  105 (111)
T ss_dssp             HHHH
T ss_pred             Hhcc
Confidence            9744


No 9  
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74  E-value=8.5e-19  Score=138.22  Aligned_cols=75  Identities=16%  Similarity=0.399  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhhhHHHHHHHHHhhcCCCCch--hHHHHHHHHHHHHHHHHHH
Q 022980          157 KALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGIEAEG--EAKVQRKTEVRRVQKFHET  234 (289)
Q Consensus       157 ka~~aI~~i~~evd~La~~v~~~e~~~~~g~k~~eke~~~LsE~LM~~LLKLD~Ie~eG--daR~~RK~~VkrVQ~~Le~  234 (289)
                      +++++|..|..+|++|.++|..|      ++++.+++|.+|+|+||++||+||+|+++|  ++|.+||.+|++||++|+.
T Consensus        15 ~sl~~I~~i~~ev~~L~~~V~~f------~~~~~dke~~~L~E~L~~~LlkLD~Ie~~G~~~vR~~RK~~vk~vQ~~l~~   88 (99)
T d1ugoa_          15 PSISRLQEIQREVKAIEPQVVGF------SGLSDDKNYKRLERILTKQLFEIDSVDTEGKGDIQQARKRAAQETERLLKE   88 (99)
T ss_dssp             TTHHHHHHHHHHHHHSHHHHHTC------CCCTTSSHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH------hCccchHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999999999998      577889999999999999999999999998  7899999999999999999


Q ss_pred             HHH
Q 022980          235 LDN  237 (289)
Q Consensus       235 LD~  237 (289)
                      ||.
T Consensus        89 LD~   91 (99)
T d1ugoa_          89 LEQ   91 (99)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            995


No 10 
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74  E-value=4.1e-18  Score=134.09  Aligned_cols=75  Identities=25%  Similarity=0.367  Sum_probs=70.9

Q ss_pred             CCCCcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           52 SGGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        52 ~~~~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      +.+..|+|+|++.+.+|.|+|++++||++||++|++.+|+|+++|+|+|+|+.++|+.+|++|||++|++|+|+-
T Consensus        28 ~~~~~i~V~Vk~~~~~~~i~V~~~~tV~~LK~~I~~~~gi~~~~qrLi~~Gk~L~D~~tL~~~~I~~g~~I~lvl  102 (103)
T d1j8ca_          28 AEPKIIKVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDGLTVHLVI  102 (103)
T ss_dssp             CCCCCEEEEEECSSCEEEEEECTTCCHHHHHHHHHHHHCSCSSSEEEEETTEEESTTSCGGGTTCSSSEEEEEEE
T ss_pred             CCCCeEEEEEECCCccEEEEECCCChHHHHHHHHHHHHCcCHHHeeeeeeeecccCCCcHHHcCCCCCCEEEEEE
Confidence            355689999999888899999999999999999999999999999999999999999999999999999999984


No 11 
>d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72  E-value=4.8e-18  Score=128.88  Aligned_cols=75  Identities=24%  Similarity=0.321  Sum_probs=70.9

Q ss_pred             CCCcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           53 GGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        53 ~~~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      +...|+|+|++.+.+++|+|++++||++||++|++.+|+|+++|+|+|+|+.++|+.+|++|||++|++|+|+-.
T Consensus         7 ~~~~i~v~Vk~~~~~~~i~v~~~~tV~~lK~~I~~~~~v~~~~qrL~f~Gk~L~d~~tL~~~gI~~gs~I~lv~r   81 (83)
T d1wx8a1           7 SSRIIRVSVKTPQDCHEFFLAENSNVRRFKKQISKYLHCNADRLVLIFTGKILRDQDILSQRGILDGSTVHVVVR   81 (83)
T ss_dssp             CSCEEEEEEECSSSEEEEEEETTCCHHHHHHHHHHHTCSCTTTBCCEETTEECCTTSCHHHHTCCTTEEEECCBC
T ss_pred             CCCeEEEEEEcCCCcEEEEECCCChHHHHHHHHHHHhCCChhHEEEEEEhhccccCCcHHHcCCCCCCEEEEEEe
Confidence            457899999998888999999999999999999999999999999999999999999999999999999999853


No 12 
>d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69  E-value=4.5e-17  Score=121.01  Aligned_cols=72  Identities=25%  Similarity=0.234  Sum_probs=68.4

Q ss_pred             CcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           55 PVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        55 ~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      ..|+|+|+. +|++++++|.+++||++||++|++.+|+||++|+|+|+|+.++|+.+|++|||++|++|+|+.
T Consensus         2 ~~~qi~Vk~~~G~~~~l~v~~~~tV~~lK~~I~~~~gi~~~~qrL~~~gk~L~d~~tL~~y~I~~~sti~l~l   74 (76)
T d1z2ma2           2 EPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNL   74 (76)
T ss_dssp             CCEEEEEECTTSCEEEEEECTTSBHHHHHHHHHHHHTCCGGGEEEEETTEECCTTSBGGGGTCCTTCEEEEEE
T ss_pred             CCEEEEEEcCCCCEEEEEECCCCcHHHHHHHHHHHhcCChhHeEEEECCeECCCCCcHHHcCCCCCCEEEEEE
Confidence            469999996 678999999999999999999999999999999999999999999999999999999999974


No 13 
>d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69  E-value=3.8e-17  Score=121.10  Aligned_cols=70  Identities=23%  Similarity=0.305  Sum_probs=66.9

Q ss_pred             cEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEE
Q 022980           56 VIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        56 ~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      +|.|+|+. .|+++.|+|.+++||.+||++|++.+|+||++|+|+|+|+.++|+.+|.+|||++|++|+|.
T Consensus         1 mi~i~vk~~~Gk~~~v~V~~~~tV~~lK~~I~~~~~i~~~~q~Li~~Gk~L~d~~tL~~y~I~~gstl~L~   71 (73)
T d1m94a_           1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELY   71 (73)
T ss_dssp             CEEEEEEETTTEEEEEEECTTSBHHHHHHHHHHHHCCTTTSEEEESSSCEECTTSBHHHHTCCTTEEEEEE
T ss_pred             CeEEEEECCCCCEEEEEECCcCcHHHHHHHHHHhhcccccEEEEEEEeEEecccCcHHHcCCCCCCEEEEE
Confidence            58999998 48999999999999999999999999999999999999999999999999999999999884


No 14 
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69  E-value=8.7e-17  Score=122.69  Aligned_cols=75  Identities=24%  Similarity=0.407  Sum_probs=70.7

Q ss_pred             CCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           53 GGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        53 ~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      ....|.|+|+. +++.+.|+|.+++||.+||++|+..+|||+++|+|+|+||.++|+.+|.+|||++|++|+|+..
T Consensus         4 ~s~~mqI~Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~qrLi~~Gk~L~d~~tL~~y~I~~~stl~l~~r   79 (87)
T d1wh3a_           4 GSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQGQVLQDWLGLGIYGIQDSDTLILSKK   79 (87)
T ss_dssp             CSSSEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTTEEEEETTEECCSSSBHHHHTCCTTEEEEEEEC
T ss_pred             CCCcEEEEEECCCCCEEEEEECCcCcHHHHHHHHHHHHCcChHHeEEEeeceEcCCCCcHHHcCCCCCCEEEEEec
Confidence            45679999997 6789999999999999999999999999999999999999999999999999999999999964


No 15 
>d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68  E-value=4.9e-17  Score=122.08  Aligned_cols=72  Identities=18%  Similarity=0.349  Sum_probs=68.3

Q ss_pred             EEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEeeC
Q 022980           57 IRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL  128 (289)
Q Consensus        57 I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~~  128 (289)
                      |.|+|+. .|++++|+|++++||.+||++|++.+|+||++|+|+|+|+.++|+.+|.+|||++||+|+|+..+
T Consensus         3 M~I~Vk~~~g~t~~l~v~~~~tV~~lK~~i~~~~gip~~~qrLi~~Gk~L~d~~tL~~y~I~~~sti~lv~R~   75 (78)
T d2zeqa1           3 MIVFVRFNSSYGFPVEVDSDTSILQLKEVVAKRQGVPADQLRVIFAGKELPNHLTVQNCDLEQQSIVHIVQRP   75 (78)
T ss_dssp             EEEEEESSSSSCEEEEECTTCBHHHHHHHHHHHHTCCGGGEEEEETTEEECTTCBGGGSSCCTTCEEEEEESS
T ss_pred             eEEEEEcCCCCEEEEEEcccccHHHHHHHHHHHHCcChhHeEEEEeeeEcCCCCCHHHcCCCCCCEEEEEecc
Confidence            7899995 67999999999999999999999999999999999999999999999999999999999998754


No 16 
>d1bt0a_ d.15.1.1 (A:) Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.68  E-value=6.5e-17  Score=119.39  Aligned_cols=70  Identities=21%  Similarity=0.409  Sum_probs=66.3

Q ss_pred             EEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           57 IRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        57 I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      |.|+||. .|++++++|.+++||++||++|++.+|+||++|+|+|+|+.++|+.+|.+|||++||+|+|+-
T Consensus         1 M~I~Vk~~~G~~~~l~V~~~~tV~~lK~~i~~~~gi~~~~qrLi~~Gk~L~d~~tL~~y~I~~~sti~lvl   71 (73)
T d1bt0a_           1 MLIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVL   71 (73)
T ss_dssp             CEEEEECTTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBTGGGTCCTTCEEEEEE
T ss_pred             CEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHhCCChHHEEEEECCeEcCCCCcHHHcCCCCCCEEEEEe
Confidence            5788985 678999999999999999999999999999999999999999999999999999999999874


No 17 
>d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68  E-value=1.2e-16  Score=120.17  Aligned_cols=74  Identities=15%  Similarity=0.268  Sum_probs=69.7

Q ss_pred             CCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           54 GPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        54 ~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      +.+|+|+|+. .|+++.++|.+++||++||++|++.+|+|+++|+|+|+|+.++|+.+|++|||++|++|+|+..
T Consensus         1 g~e~qi~Vk~~~G~~~~l~V~~~~tV~~lK~~I~~~~~ip~~~qrLi~~Gk~L~d~~tL~~y~I~~~sti~lvi~   75 (80)
T d1ttna1           1 GYECQLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVS   75 (80)
T ss_dssp             CCSEEEEEEETTTEEEEEEECTTSHHHHHHHHHHHTTCCCSTTCEEEETTEECCTTSHHHHCCCSSSCEEEEECC
T ss_pred             CCeEEEEEEcCCCCEEEEEECCcCcHHHHHHHHHHHhCCCcccEEEEECceEcCCCCcHHHcCCCCCCEEEEEec
Confidence            3579999997 5799999999999999999999999999999999999999999999999999999999999864


No 18 
>d1ogwa_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67  E-value=9.1e-17  Score=119.46  Aligned_cols=71  Identities=25%  Similarity=0.442  Sum_probs=67.0

Q ss_pred             EEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           57 IRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        57 I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      |+|+|++ .|++++++|++.+||++||++|+..+|+|+++|+|+|+|+.++|+.+|++|||++||+|+|+..
T Consensus         1 MqI~Vk~l~G~~~~l~v~~~~tV~~lK~~I~~~~gi~~~~qrL~~~Gk~L~d~~tL~~y~i~~~s~I~L~~r   72 (76)
T d1ogwa_           1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR   72 (76)
T ss_dssp             CEEEEEETTSCEEEEECCTTSBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBGGGGTCCTTCEEEEEEC
T ss_pred             CEEEEEcCCCCEEEEEECCCCcHHHHHHhhhhhcCCChHHEEeEECCeEcCCCCCHHHcCCCCCCEEEEEEe
Confidence            5789996 5789999999999999999999999999999999999999999999999999999999999863


No 19 
>d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66  E-value=1.7e-16  Score=118.34  Aligned_cols=71  Identities=23%  Similarity=0.390  Sum_probs=65.6

Q ss_pred             EEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEE--cCeecCCchhhhhcCCCCCCEEEEEeeC
Q 022980           58 RINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLF--RGKEKEDNEHLDVSGMKDKSKVLLLEEL  128 (289)
Q Consensus        58 ~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiy--kGK~ldd~~~L~~~GVKdgskL~Lv~~~  128 (289)
                      .|+||. +|+.++|+|++.+||.+||++|+..+|+||++|||+|  +|+.+.|+.+|++|||++|++|+|+.+.
T Consensus         2 ~l~Vk~l~G~~~~v~V~~~~tV~~lK~~I~~~~gip~~~QrLi~~~~Gk~L~D~~tL~~y~i~~g~~i~lv~~~   75 (76)
T d1z2ma1           2 DLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDK   75 (76)
T ss_dssp             EEEEEESSSCEEEEECCSSCCHHHHHHHHHHHHCCCGGGEEEEEETTCCBCCSSSCSGGGTCCTTCEEEEEECC
T ss_pred             EEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHhccCCccEEEEEcCCCeeccCCCcHHHcCCCCCCEEEEEEEC
Confidence            467773 6789999999999999999999999999999999999  7999999999999999999999999753


No 20 
>d1oqya4 d.15.1.1 (A:1-77) Ubiquitin-like domain of Rad23 homolog A (Hhr23a) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66  E-value=7.8e-17  Score=120.22  Aligned_cols=71  Identities=18%  Similarity=0.337  Sum_probs=67.0

Q ss_pred             cEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhC---CCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           56 VIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTG---LDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        56 ~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TG---vpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      .|+|+||. .|.+|+|+|++++||++||++|++..|   +||++|||+|+|+.++|+.+|++|||++|+.|+||-
T Consensus         2 ~~~i~vk~l~g~~~~l~v~~~~TV~~lK~~i~~~~g~~~i~~~~qrLi~~Gk~L~D~~tL~~y~I~~~s~i~~~v   76 (77)
T d1oqya4           2 AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMV   76 (77)
T ss_dssp             CCCEEEEETTTEEEEECCCTTCBHHHHHHHHHHHTCSSSCCSTEEEEESSSSEECSSSBTTTTCCCTTSCEEEEE
T ss_pred             cEEEEEECCCCCEEEEEECCCCcHHHHHHHHHHhcCCCCCChHHEEeEECCcCccCCCcHHHcCCCCCCEEEEEE
Confidence            58899997 678999999999999999999999988   899999999999999999999999999999999874


No 21 
>d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63  E-value=3.2e-16  Score=123.36  Aligned_cols=73  Identities=21%  Similarity=0.162  Sum_probs=68.8

Q ss_pred             CCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEE
Q 022980           53 GGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        53 ~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      +..+|.|+|+. .|+.+.|.|.+.+||++||++|++.+|+|+++|+|+|+|+.++|+.+|.+|||++|++|.|.
T Consensus        25 ~~~~i~V~V~~~~Gk~~~v~V~p~~TV~~LK~~I~~~~gip~~~qrLi~~Gk~L~D~~tL~dygI~~GstI~L~   98 (100)
T d1uh6a_          25 AATMIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELY   98 (100)
T ss_dssp             CCCEEEEEEECSSSSCEEEEEETTSBHHHHHHHHHHHHCCCGGGCEEEETTEECCSSCBHHHHTCCTTEEEEEE
T ss_pred             CCceEEEEEECCCCCEEEEEECCcChHHHHHHHHHHHHCCCcceEEEEEEeecccCcCCHHHcCCCCCCEEEEE
Confidence            34679999997 57899999999999999999999999999999999999999999999999999999999985


No 22 
>d2faza1 d.15.1.1 (A:1-76) Ubiquitin-like PHD and RING finger domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63  E-value=5.7e-16  Score=115.77  Aligned_cols=71  Identities=24%  Similarity=0.374  Sum_probs=64.9

Q ss_pred             EEEEEEe--CCeEEEEE-ecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           57 IRINVAR--GPSQYEVH-VPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        57 I~V~Vk~--g~~~~~V~-V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      |+|+|+.  |..++.++ +++.+||++||++|++.+|+|+++|+|+|+|+.++|+.+|.+|||++|++|+|+-.
T Consensus         1 M~I~Vktl~Gk~t~~l~~v~~~~tV~~lK~~I~~~~gip~~~qrLi~~Gk~L~D~~tL~~y~I~~~sti~lv~r   74 (76)
T d2faza1           1 MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFDYEVRLNDTIQLLVR   74 (76)
T ss_dssp             EEEEEEETTSSCEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTCBTTTTTCCTTCEEEEEEC
T ss_pred             CEEEEEeCCCCcEEEEecCCCCCCHHHHHHHHHHHHCcChHHeEEEEeeEeccCCCcHHHcCCCCCCEEEEEEE
Confidence            5677874  55688885 99999999999999999999999999999999999999999999999999999863


No 23 
>d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63  E-value=7.9e-16  Score=114.99  Aligned_cols=72  Identities=21%  Similarity=0.321  Sum_probs=65.1

Q ss_pred             EEEEEEe--CCeEEEE-EecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEeeC
Q 022980           57 IRINVAR--GPSQYEV-HVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL  128 (289)
Q Consensus        57 I~V~Vk~--g~~~~~V-~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~~  128 (289)
                      |.|+|+.  |.+++.+ .|.+.+||.+||.+|++.+|+|+++|+|+|.|+.++|+.+|++|||++|++|+|+-.|
T Consensus         1 M~I~Vk~l~G~~t~~~~~v~~~~TV~~lK~~I~~~~gip~~~qrLi~~Gk~L~d~~tL~~y~I~~~s~i~lv~rp   75 (76)
T d1wy8a1           1 MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFDYDVGLNDIIQLLVRP   75 (76)
T ss_dssp             EEEEEEETTCSCEEEEEEECTTCBHHHHHHHHHHHSCCCTTTEEEEETTEECCSSSBHHHHTCCTTCEEEEEECC
T ss_pred             CEEEEEeCCCCceEEEeccCCCChHHHHHHHHHHHHCCCchhcEEEEEeeEecCCCCHHHcCCCCCCEEEEEEcc
Confidence            4566664  5567877 6999999999999999999999999999999999999999999999999999998765


No 24 
>d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63  E-value=2.1e-16  Score=116.89  Aligned_cols=69  Identities=16%  Similarity=0.336  Sum_probs=64.8

Q ss_pred             EEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           57 IRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        57 I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      |.|+|+. +|+.+.++|++++||++||++|++.+|+|+++|||+|+|+.++|+.+|.+||| +|++|+|+.
T Consensus         1 m~I~Vk~~~g~~~~l~V~~~~tV~~lK~~I~~~~gip~~~qrLi~~Gk~L~d~~tL~dy~i-~~~ti~lv~   70 (73)
T d1wx9a1           1 LEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV-GGKVIHLVE   70 (73)
T ss_dssp             EEEEEECTTSCEEEEEECTTSBHHHHHHHHHHHHCCCTTTCCCEETTEECCSSSBHHHHTC-TTEEEBCCC
T ss_pred             CEEEEEcCCCCEEEEEECCCChHHHHHHHHHHHhCCChHHEEEEECCeEccCCCCHHHhCC-CCCEEEEEe
Confidence            6789996 67899999999999999999999999999999999999999999999999999 589999875


No 25 
>d1uela_ d.15.1.1 (A:) Ubiquitin-like domain of Rad23 homolog B (Hhr23B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61  E-value=2e-15  Score=116.58  Aligned_cols=71  Identities=18%  Similarity=0.385  Sum_probs=65.9

Q ss_pred             EEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhC---CCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           57 IRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTG---LDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        57 I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TG---vpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      |.|+|+. .|++|.|+|.+++||++||++|++.+|   +|+++|||+|+|+.++|+.+|.+|||++|++|+|+..
T Consensus         1 M~I~vk~~~g~~~~l~v~~~~TV~~lK~~i~~~~~~~~i~~~~qrLi~~Gk~L~d~~tL~~y~I~~~s~i~lv~~   75 (95)
T d1uela_           1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVT   75 (95)
T ss_dssp             CEEEEEETTCCEEEEECCTTSBHHHHHHHHHHHHCTTTCCTTTEEEEETTEECCTTSBGGGGTCCSSSEEEEEES
T ss_pred             CEEEEEeCCCCEEEEEECCCccHHHHHHHHHhhhcccCCCccceEEEECCeEccCCCcHHHcCCCCCCEEEEEEC
Confidence            5788886 678999999999999999999999987   8899999999999999999999999999999998864


No 26 
>d1v5oa_ d.15.1.1 (A:) 1700011n24rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60  E-value=2e-15  Score=118.91  Aligned_cols=74  Identities=18%  Similarity=0.292  Sum_probs=65.2

Q ss_pred             cEEEEEEe-----CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeec-CCchhhhhcCCCCCCEEEEEeeCC
Q 022980           56 VIRINVAR-----GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEK-EDNEHLDVSGMKDKSKVLLLEELT  129 (289)
Q Consensus        56 ~I~V~Vk~-----g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~l-dd~~~L~~~GVKdgskL~Lv~~~~  129 (289)
                      -|+|+|-+     .+.+|+|+|++++||.+||++|+..+|+|+++|+|+|+|+.+ +|..+|.+|||++|+.|+|+....
T Consensus         7 ~m~itV~~~~~~~~~~t~~l~V~~~~tV~~LK~~Ie~~~gip~~~Q~Li~~Gk~L~dd~~tL~~~gI~~g~~i~l~~r~~   86 (102)
T d1v5oa_           7 GMLITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVYMEQLLTDDHCSLGSYGLKDGDMVVLLQKDN   86 (102)
T ss_dssp             CEEEEEEECCCCCCCCEEEEEECTTCBHHHHHHHHHHHTCCCGGGBCEEETTEEECCSSSBHHHHTCCTTEEEEECBCCC
T ss_pred             CEEEEEEecccCCCCCEEEEEECCcccHHHHHHHHHHHhCCCcceEEEEeCCeEeecccCCHHHcCCCCCCEEEEEECCC
Confidence            46666632     467999999999999999999999999999999999999997 677899999999999999986543


No 27 
>d1zkha1 d.15.1.1 (A:1-86) Splicing factor 3 subunit 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56  E-value=5.6e-15  Score=112.80  Aligned_cols=64  Identities=20%  Similarity=0.260  Sum_probs=61.3

Q ss_pred             CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           64 GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        64 g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      .|+.+.++|++.+||.+||++|++.+|+|+++|+|+|+|+.++|+.+|.+|||++|++|+|+..
T Consensus        20 ~G~~~~l~v~~~~tV~~lK~~I~~~~~ip~~~q~Li~~Gk~L~D~~tL~dY~I~~gsti~l~~r   83 (86)
T d1zkha1          20 NGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALK   83 (86)
T ss_dssp             SSCEEEEEECTTSBHHHHHHHHHHHTCCCTTTEEEEETTEEECTTSBHHHHTCCTTEEEEEEES
T ss_pred             CCeEEEEEECCCChHHHHHHHHHhhhcCChHHEEEEeCCcCcCCCCCHHHcCCCCCCEEEEEEe
Confidence            5789999999999999999999999999999999999999999999999999999999999853


No 28 
>d1wgha_ d.15.1.1 (A:) Ubiquitin-like protein 3, Ubl3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55  E-value=1.2e-14  Score=117.12  Aligned_cols=78  Identities=14%  Similarity=0.191  Sum_probs=69.6

Q ss_pred             CCCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHH--------HHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCE-
Q 022980           52 SGGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAI--------SEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSK-  121 (289)
Q Consensus        52 ~~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I--------~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgsk-  121 (289)
                      .+.++|.|+|+. .|+.+.+.|++++||++||++|        ++..|+||++|||||.||.|+|+.+|.+|+|.+|++ 
T Consensus        12 ~~~~~i~i~v~~l~Gk~~~~~v~p~~TV~~lK~~I~~~~p~~~~e~~~~~~~~qRLiy~Gk~L~D~~tL~~~~i~~g~~~   91 (116)
T d1wgha_          12 VPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTT   91 (116)
T ss_dssp             CCSSSEEEEEECSSSCEEEEEECTTCBHHHHHHHHHHSSSCCSSCCCCCCTTTEEEEETTEEECSSCBTTTTTCCSSCEE
T ss_pred             CCCCeEEEEEEEcCCCEEEEEECCcchHHHHHHHHHhhcccccccccCCChHHeEEEECCEEecCCCCHHHcCCCCCCEE
Confidence            467889999996 5789999999999999999999        577999999999999999999999999999999997 


Q ss_pred             -EEEEeeCC
Q 022980          122 -VLLLEELT  129 (289)
Q Consensus       122 -L~Lv~~~~  129 (289)
                       |||+..+.
T Consensus        92 ~lhlv~r~~  100 (116)
T d1wgha_          92 VMHLVARET  100 (116)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEeCCC
Confidence             66665443


No 29 
>d1wiaa_ d.15.1.1 (A:) Ubiquitin-like protein bab25500 (2010008E23Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54  E-value=2.3e-14  Score=111.49  Aligned_cols=73  Identities=12%  Similarity=0.168  Sum_probs=65.5

Q ss_pred             CCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeec-CCchhhhhcCCCCCCEEEEEeeC
Q 022980           53 GGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEK-EDNEHLDVSGMKDKSKVLLLEEL  128 (289)
Q Consensus        53 ~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~l-dd~~~L~~~GVKdgskL~Lv~~~  128 (289)
                      ....|+|+||. .+..+.|.|.+.+||++||++|+   .+++++|||||+|+.+ ||..+|.+|||.+|++|+|+..+
T Consensus         4 ~~s~m~i~vK~l~~~~~~v~v~~~~TV~~lK~~i~---~~~~~~qrLi~~Gk~L~dd~~tL~~y~i~~g~~v~l~~~~   78 (95)
T d1wiaa_           4 GSSGINVRLKFLNDTEELAVARPEDTVGTLKSKYF---PGQESQMKLIYQGRLLQDPARTLSSLNITNNCVIHCHRSP   78 (95)
T ss_dssp             CCCSEEEEEEETTTEEEEEEECSSSBHHHHHHHHS---SSTTTTCEEEETTEECCCSSCBTTTTTCCTTEEEEEECCC
T ss_pred             CCCcEEEEEEcCCCCEEEEEECCcCcHHHHHHHHh---cCCcceeEEEECCEEcccCCCCHHHcCCCCCCEEEEEEcC
Confidence            45779999998 67889999999999999999885   6789999999999997 57789999999999999999654


No 30 
>d1wjua_ d.15.1.1 (A:) NEDD8 ultimate buster-1, NUB1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=9.6e-15  Score=114.54  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=67.7

Q ss_pred             CcEEEEEEe---CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEeeC
Q 022980           55 PVIRINVAR---GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL  128 (289)
Q Consensus        55 ~~I~V~Vk~---g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~~  128 (289)
                      .+|.|+|..   .++++.++|..++||.+||.+|++.+|+|+++|+|||+|+.++|+.+|.+|||+++++||+|..+
T Consensus        16 ati~V~~~~~~~~g~~~~lev~~~~TV~~LK~~I~~~~gi~~~~qkLi~~Gk~L~d~~tL~~~gI~~~s~i~vi~~~   92 (100)
T d1wjua_          16 ATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFGLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLELK   92 (100)
T ss_dssp             EEEEEECCTTTCCSSSEEEEEESSSBHHHHHHHHHHHTTCCSTTCEEEETTEECCTTSBHHHHTCCSSEEEEEECCC
T ss_pred             EEEEEEEeeccCCCeEEEEEECCCcHHHHHHHHHHHHHCCCCeeEEEEEcccCcCCCcCHHHcCCCCCCEEEEEEcC
Confidence            478887743   56889999999999999999999999999999999999999999999999999999999999643


No 31 
>d1v2ya_ d.15.1.1 (A:) Ubiquitin-like protein 3300001g02rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51  E-value=5.2e-15  Score=116.88  Aligned_cols=76  Identities=24%  Similarity=0.360  Sum_probs=68.6

Q ss_pred             CCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcE---------------EEEcCeecC-CchhhhhcC
Q 022980           53 GGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQK---------------VLFRGKEKE-DNEHLDVSG  115 (289)
Q Consensus        53 ~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QK---------------LiykGK~ld-d~~~L~~~G  115 (289)
                      ....|+|+|+. .|..++|+|++++||.+||++|++.+|||+++||               |+|+|+.+. +..+|.+||
T Consensus         4 gss~M~v~Vk~~~G~~~~v~V~~~~TV~~LK~~I~~~~~ip~~~Qr~~~~~~~~~~~~~~~Li~~G~~L~d~~~tL~~~g   83 (105)
T d1v2ya_           4 GSSGMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYG   83 (105)
T ss_dssp             CCCSEEEEEECSSSCEEEEEECTTCBHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHTTEEEESSSCEECCSSSBHHHHT
T ss_pred             CCCcEEEEEEeCCCCEEEEEECCCChHHHHHHHHHHHHCcCHHHhcccccccccccccceEEEECCEECcccCCCHHHcC
Confidence            45679999996 6789999999999999999999999999999998               999999975 556899999


Q ss_pred             CCCCCEEEEEeeC
Q 022980          116 MKDKSKVLLLEEL  128 (289)
Q Consensus       116 VKdgskL~Lv~~~  128 (289)
                      |++|++|+|+...
T Consensus        84 I~~g~~l~lv~r~   96 (105)
T d1v2ya_          84 IRNRDEVSFIKKL   96 (105)
T ss_dssp             CCSSEEEEEEECS
T ss_pred             CCCCCEEEEEEec
Confidence            9999999999643


No 32 
>d1se9a_ d.15.1.1 (A:) Hypothetical protein At3g01050 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.49  E-value=1e-13  Score=109.22  Aligned_cols=77  Identities=14%  Similarity=0.133  Sum_probs=67.0

Q ss_pred             CCcEEEEEEe--CCeEEEEEecCCCcHHHHHHHHHHH-----hCCC--CCCcEEEEcCeecCCchhhhhcCCCCCC----
Q 022980           54 GPVIRINVAR--GPSQYEVHVPARSTFGDLKKAISEK-----TGLD--PQEQKVLFRGKEKEDNEHLDVSGMKDKS----  120 (289)
Q Consensus        54 ~~~I~V~Vk~--g~~~~~V~V~a~sTvgdLK~~I~e~-----TGvp--p~~QKLiykGK~ldd~~~L~~~GVKdgs----  120 (289)
                      ...|.|+|+.  |...+++.|++++||.+||++|+..     .|+|  +++|||||+||.|+|+.+|.+|+|.+|+    
T Consensus         5 ~~~i~I~~r~~~G~~i~~~~v~~s~TV~~lK~~I~~~~~~~k~~iP~~~~~qRLIf~Gk~L~D~~tL~dy~i~~g~~~~~   84 (101)
T d1se9a_           5 HNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDYRSPVSNLAGA   84 (101)
T ss_dssp             CCCEEEEEEETTSCEEEEEEECTTCBHHHHHHHHHHHSCTTCSSSCCSGGGEEEEETTEECCTTSBGGGGSCCTTSCTTC
T ss_pred             cceEEEEEEeCCCCeecceecCccCHHHHHHHHHHHhccccccCCCCCcccEEEEECCeEecCCCCHHHcCCCCCCcCCC
Confidence            4567777776  4456789999999999999999886     7898  7899999999999999999999999998    


Q ss_pred             --EEEEEeeCCC
Q 022980          121 --KVLLLEELTN  130 (289)
Q Consensus       121 --kL~Lv~~~~s  130 (289)
                        ++||+..+..
T Consensus        85 ~~tmHlVvrpp~   96 (101)
T d1se9a_          85 VTTMHVIIQAPV   96 (101)
T ss_dssp             CEEEEEEECCCS
T ss_pred             ceEEEEEeCCCC
Confidence              8999976543


No 33 
>d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.48  E-value=2e-14  Score=114.88  Aligned_cols=73  Identities=19%  Similarity=0.202  Sum_probs=65.3

Q ss_pred             CcEEEEEE--eCCeEEEEEecC-CCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           55 PVIRINVA--RGPSQYEVHVPA-RSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        55 ~~I~V~Vk--~g~~~~~V~V~a-~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      -+|+|.|+  +.|++++|.|.+ ++||.+||.+|++.+|+|+++|||+|+|+.++|+.+|.+|||++|++|+|+-.
T Consensus        28 ~ti~V~v~~~~~G~~i~l~v~~~sdtV~~lK~~I~~~~gip~~~QrLi~~Gk~L~D~~tL~~ynI~~gsti~L~lr  103 (111)
T d1we6a_          28 ATIRVSKPNENDGQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLR  103 (111)
T ss_dssp             EEEEECCTTCSSSCCEEEEESCSSSBHHHHHHHHHHHTTCCTTTSEEECSSSBCCTTSBTTTTTCSSSCEEEEECS
T ss_pred             EEEEEEcccCCCCeEEEEEecCCccHHHHHHHHHHHHHCCCccceEEEEeeEEccccCCHHHcCCCCCCEEEEEee
Confidence            44666664  357899999976 88999999999999999999999999999999999999999999999999853


No 34 
>d1hx1b_ a.7.7.1 (B:) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=1e-13  Score=110.31  Aligned_cols=97  Identities=18%  Similarity=0.295  Sum_probs=80.3

Q ss_pred             CchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CCCchhhhhhHHHHHHHHHhhcCCC--
Q 022980          141 SPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGT------KVPSEELDTSAELLMKELLKLDGIE--  212 (289)
Q Consensus       141 ~pee~~~e~~k~~~i~ka~~aI~~i~~evd~La~~v~~~e~~~~~g~------k~~eke~~~LsE~LM~~LLKLD~Ie--  212 (289)
                      .|+|+ .++++...+++++.   .+..++++|.+++.+++++|....      ++.++++..++|.+|+.|++||++.  
T Consensus         3 ~PeEe-~~LK~l~~~ek~v~---~~~kkL~~l~~eL~giekGFL~~~l~~ea~~kl~krik~~~E~~Mk~LE~LDsl~lp   78 (112)
T d1hx1b_           3 SPQEE-VELKKLKHLEKSVE---KIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMKILEEIDTLILP   78 (112)
T ss_dssp             CHHHH-HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             ChHHH-HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence            35555 66777776666554   455688999999999998877543      3789999999999999999999996  


Q ss_pred             -CchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022980          213 -AEGEAKVQRKTEVRRVQKFHETLDNLKAI  241 (289)
Q Consensus       213 -~eGdaR~~RK~~VkrVQ~~Le~LD~lk~~  241 (289)
                       .+.++|.+||.+|++||.+|.++|.+.++
T Consensus        79 ~~~~~~R~kRK~lV~~iQ~~L~q~D~l~~~  108 (112)
T d1hx1b_          79 ENFKDSRLKRKGLVKKVQAFLAECDTVEQN  108 (112)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence             34499999999999999999999999875


No 35 
>d1t7sa_ a.7.7.1 (A:) BAG-family molecular chaperon regulator-1, BAG1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.45  E-value=6e-14  Score=113.63  Aligned_cols=107  Identities=20%  Similarity=0.137  Sum_probs=86.4

Q ss_pred             CEEEEEeeCCCCCCCCCcCCCCchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCC------CCCch
Q 022980          120 SKVLLLEELTNKEKKPKEVKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLS-ERVASLEVAVNGGT------KVPSE  192 (289)
Q Consensus       120 skL~Lv~~~~s~e~k~~~~~~~pee~~~e~~k~~~i~ka~~aI~~i~~evd~La-~~v~~~e~~~~~g~------k~~ek  192 (289)
                      ++|||+|.+.+           |+++ .+.++...+++.+..+.   .++.++. .++.+++++|....      ++.+|
T Consensus         1 ~kvMviGKk~~-----------peed-~~lK~L~~~Ek~v~~~~---~kl~~~n~~el~giekGFL~k~l~~eal~kl~K   65 (129)
T d1t7sa_           1 DKIIVMGGKNA-----------LVDD-AGFKMLMQYEKHNLSNL---QKAYDLNLRDVADLERGFLEKPKQVEMGKKLEK   65 (129)
T ss_dssp             CCCEEECSSSE-----------EECH-HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred             CceeeeCCCCC-----------cHHH-HHHHHHHHHHHHHHHHH---HHHHhhhHHHHHHHHhcccccHHHHHHHHHHHH
Confidence            57999998776           3333 77888888887766554   4666664 57889888887643      36799


Q ss_pred             hhhhhHHHHHHHHHhhcCCCC---------chhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022980          193 ELDTSAELLMKELLKLDGIEA---------EGEAKVQRKTEVRRVQKFHETLDNLKAI  241 (289)
Q Consensus       193 e~~~LsE~LM~~LLKLD~Ie~---------eGdaR~~RK~~VkrVQ~~Le~LD~lk~~  241 (289)
                      ++..++|.||+.|+.||++..         ..++|.+||.+|++||.+|.++|.+.++
T Consensus        66 rik~~~E~~Mk~LEtLDsl~l~~~~~~ee~~~~~R~kRK~LV~~iQ~~L~~~D~l~~~  123 (129)
T d1t7sa_          66 KVKYFNEEAERHLETLDGMNIITETTPENQAKRNREKRKTLVNGIQTLLNQNDALLRR  123 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHTEEECCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            999999999999999999963         2289999999999999999999999876


No 36 
>d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43  E-value=1.6e-13  Score=106.45  Aligned_cols=75  Identities=9%  Similarity=0.139  Sum_probs=67.2

Q ss_pred             CCcEEEEEEeC--CeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCe-------ecCCchhhhhcCCCCCCEEEE
Q 022980           54 GPVIRINVARG--PSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGK-------EKEDNEHLDVSGMKDKSKVLL  124 (289)
Q Consensus        54 ~~~I~V~Vk~g--~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK-------~ldd~~~L~~~GVKdgskL~L  124 (289)
                      ...|.|+|++.  +..++..|+.+.||.+||++|+..+|+||++|+|+|.|+       ..+|+.+|..|||++|++|+|
T Consensus         5 ss~v~v~I~s~~~~~~~E~r~~~~~TV~~LK~kle~~tGip~~~qrL~~~~~~~~~~~~l~~d~~~L~~y~i~dg~~ihl   84 (95)
T d1v6ea_           5 SSGVMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQEDALLGSYPVDDGCRIHV   84 (95)
T ss_dssp             CCCEEEEEEETTSSSCEEEEECTTSBHHHHHHHHHHHTCSCTTTCBCEEECSSSCEEEECCCSSSBTTSSSCCTTCEEEE
T ss_pred             CCcEEEEEEECCCCcEEEEEeCCCCCHHHHHHHHHHHhCcCchhEEEEEeCCCCceeecccCCcCCHHHCCCCCCCEEEE
Confidence            45799999984  344788999999999999999999999999999999998       478999999999999999999


Q ss_pred             EeeC
Q 022980          125 LEEL  128 (289)
Q Consensus       125 v~~~  128 (289)
                      +...
T Consensus        85 vd~~   88 (95)
T d1v6ea_          85 IDHS   88 (95)
T ss_dssp             BCCS
T ss_pred             EeCC
Confidence            9643


No 37 
>d2c9wb1 d.15.1.1 (B:2-104) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42  E-value=1.7e-13  Score=108.14  Aligned_cols=65  Identities=17%  Similarity=0.213  Sum_probs=61.5

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCC
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKS  120 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgs  120 (289)
                      .|.|+|++++.++.++|.+.+||.+||++|++.+|+|+++|+|+|+|+.++|+.+|++|||.+++
T Consensus         1 qifv~i~~~k~Ti~l~v~~~~TV~~lK~~I~~~~gip~~~QrLi~~Gk~L~D~~TL~dYgI~~~~   65 (103)
T d2c9wb1           1 DVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQT   65 (103)
T ss_dssp             CEEEEEEEBTEEEEEEECTTSBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBHHHHTCCTTT
T ss_pred             CEEEEEeCCCEEEEEEeCCCCcHHHHHHHHHHHhCCCcccEEEEECCEEcCCCCCHHHcCCCccc
Confidence            37899999988999999999999999999999999999999999999999999999999997665


No 38 
>d1wgda_ d.15.1.1 (A:) Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36  E-value=1.5e-12  Score=100.45  Aligned_cols=74  Identities=19%  Similarity=0.206  Sum_probs=63.0

Q ss_pred             CcEEEEEEeC---CeEEEEEecCCCcHHHHHHHHHHHhC--CCCCCcEEEEcCeecCCchhhhhcCCCCCC--EEEEEee
Q 022980           55 PVIRINVARG---PSQYEVHVPARSTFGDLKKAISEKTG--LDPQEQKVLFRGKEKEDNEHLDVSGMKDKS--KVLLLEE  127 (289)
Q Consensus        55 ~~I~V~Vk~g---~~~~~V~V~a~sTvgdLK~~I~e~TG--vpp~~QKLiykGK~ldd~~~L~~~GVKdgs--kL~Lv~~  127 (289)
                      ..|+|+|+.-   ...+.+++++++||.+||++|++..|  +|+++|||||+||.++|+.+|.+|+++.++  .|+|+-.
T Consensus         6 ~~i~l~Ik~~~~~~~~~~~~v~~~~TV~~LK~~I~~~~~~~~~~~~qrLIy~Gk~L~D~~~L~d~~~~~~~~~viHLV~~   85 (93)
T d1wgda_           6 SGVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCN   85 (93)
T ss_dssp             CCCEEEEECSSSSCCCEEEECCTTSCHHHHHHHHHHHSTTCCCTTTCEEEETTEECCSSSCHHHHSCSSSCSEEEEEECC
T ss_pred             CcEEEEEECCCCCceeEEEEcCCCCcHHHHHHHHHHHcCCCCChHHEEEEECCeEccCCCCHHHhCcccCCCCEEEEEec
Confidence            4589999972   23488999999999999999999954  999999999999999999999999876554  8988864


Q ss_pred             C
Q 022980          128 L  128 (289)
Q Consensus       128 ~  128 (289)
                      +
T Consensus        86 ~   86 (93)
T d1wgda_          86 V   86 (93)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 39 
>d1wjna_ d.15.1.1 (A:) Tubulin-folding protein TbcE {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35  E-value=1.3e-12  Score=101.27  Aligned_cols=75  Identities=15%  Similarity=0.217  Sum_probs=65.8

Q ss_pred             CCCCcEEEEEEeC----CeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCee--------cCCchhhhhcCCCCC
Q 022980           52 SGGPVIRINVARG----PSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKE--------KEDNEHLDVSGMKDK  119 (289)
Q Consensus        52 ~~~~~I~V~Vk~g----~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~--------ldd~~~L~~~GVKdg  119 (289)
                      ++...|+|+|++.    ++.+.+.||...||++||.+|+..+|+|+.+|+|+|.|+.        .+|+.+|..|||+||
T Consensus         5 ss~~~iti~i~~~~~~~~~~~~~kv~~~~TV~~LK~~i~~~~gip~~~qrL~y~~~~~~~~~~~l~~d~~tL~~YgI~dg   84 (97)
T d1wjna_           5 SSGQLLTLKIKCSNQPERQILEKQLPDSMTVQKVKGLLSRLLKVPVSELLLSYESSKMPGREIELENDLQPLQFYSVENG   84 (97)
T ss_dssp             SSSCEEEEEEEESSCSSSCCEEEEEETTSBHHHHHHHHHTTTTCCTTTCEEEEECTTSCSCEEECCCSSSBSGGGTCCTT
T ss_pred             cCCCeEEEEEEeCCCCCCceEEEEcCCCCCHHHHHHHHHHHHCcChHHeEEEecCCCCCcccceecCCCcCHhhccCCCC
Confidence            4567788998863    4668999999999999999999999999999999999973        347899999999999


Q ss_pred             CEEEEEe
Q 022980          120 SKVLLLE  126 (289)
Q Consensus       120 skL~Lv~  126 (289)
                      ++|++..
T Consensus        85 ~~I~V~~   91 (97)
T d1wjna_          85 DCLLVRW   91 (97)
T ss_dssp             CEEEEEC
T ss_pred             CEEEEEe
Confidence            9999763


No 40 
>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
Probab=99.33  E-value=2e-12  Score=96.36  Aligned_cols=73  Identities=15%  Similarity=0.271  Sum_probs=69.2

Q ss_pred             CCcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           54 GPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        54 ~~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      ...|+|+|+.++..+.+.|...+++..|++.+++..|+++++|+|+|.|+.++++.++.+|||++|+.|.++-
T Consensus         2 ~~~I~ikv~~~~~~~~f~v~~~~~~~~l~~~~~~~~~i~~~~~~l~f~G~~l~~~~T~~~~~i~dgd~I~v~~   74 (79)
T d1euvb_           2 ETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHR   74 (79)
T ss_dssp             CSEEEEEEESSSCEEEEEEETTSCTHHHHHHHHHHTTCCGGGEEEEETTEECCTTCCTTTTTCCTTEEEEEEE
T ss_pred             CcEEEEEECCCCeEEEEEECCCCcHHHHHHHHHHHhCCChHhEEEEECCEEeCCCCCHHHCCCCCCCEEEEEE
Confidence            3569999998888888999999999999999999999999999999999999999999999999999999885


No 41 
>d1t0ya_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.33  E-value=2.3e-12  Score=98.67  Aligned_cols=74  Identities=16%  Similarity=0.275  Sum_probs=64.6

Q ss_pred             CcEEEEEEeCCeE--EEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCe-------ecCCchhhhhcCCCCCCEEEEE
Q 022980           55 PVIRINVARGPSQ--YEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGK-------EKEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        55 ~~I~V~Vk~g~~~--~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK-------~ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      ..+.|.|.+....  .+..||...||++||.+|+..+|+||..|+|+|.|+       ..+|+.+|..|||+||++|+|+
T Consensus         3 ~~~~l~it~~~t~~~~E~r~~~~~TV~~LK~kle~~~Gip~~~q~L~~~~~~~~~~~~l~dd~~~L~~ygi~dG~~Ihvv   82 (90)
T d1t0ya_           3 EVYDLEITTNATDFPMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKDLGVRDGYRIHAV   82 (90)
T ss_dssp             CEEEEEEEESSCCSCEEEEEETTSBHHHHHHHHHHHHCCCTTTEEEEEECSSSSEEEECCCCSSBTTTTTCCSSEEEEEE
T ss_pred             cEEEEEEEECCCccEEEEecCCCCCHHHHHHHHHHHHCCChhheEEEEeCCCCCcccccccCCCCHHHCCCCCCCEEEEE
Confidence            3578888886544  467789999999999999999999999999999997       3678999999999999999998


Q ss_pred             eeC
Q 022980          126 EEL  128 (289)
Q Consensus       126 ~~~  128 (289)
                      ...
T Consensus        83 d~~   85 (90)
T d1t0ya_          83 DVT   85 (90)
T ss_dssp             ECT
T ss_pred             eCC
Confidence            643


No 42 
>d1x1ma1 d.15.1.1 (A:8-101) Ubiquitin-like protein 7 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.15  E-value=1.5e-11  Score=95.45  Aligned_cols=58  Identities=22%  Similarity=0.353  Sum_probs=51.2

Q ss_pred             EEecCCCcHHHHHHHHHHHh--CCC-CCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           70 VHVPARSTFGDLKKAISEKT--GLD-PQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        70 V~V~a~sTvgdLK~~I~e~T--Gvp-p~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      ..+|...||.+||+.|+...  ++| |++|||||.||.++|+.+|++|||++|++|+|+.+
T Consensus        32 ~~~~~~~tV~~lK~~i~~~~~~~~P~p~~~rLIy~Gk~L~D~~tL~~y~I~~gstihLV~r   92 (94)
T d1x1ma1          32 EYSLGGYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRK   92 (94)
T ss_dssp             SSCCCCCBHHHHHHHHHHHCTTTCCCSSSEEEEETTEECCTTCBHHHHTCCTTCEEEEEES
T ss_pred             ccCCCccCHHHHHHHHHHHcccCCCChhheEEEECCeEECCCccHHHcCCCCCCEEEEEEe
Confidence            34566789999999999886  454 69999999999999999999999999999999963


No 43 
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.98  E-value=7.7e-10  Score=81.73  Aligned_cols=71  Identities=20%  Similarity=0.377  Sum_probs=66.4

Q ss_pred             cEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           56 VIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        56 ~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      .|+|+|+. .+..+.+.|..++++..|+...++..|+++.+++|+|.|+.++++.++.+||+.||+.|.++.
T Consensus         2 ~I~ikv~~~dg~~v~f~v~~~t~l~kl~~~y~~~~~~~~~~~~f~fdG~~l~~~~T~~~l~~edgD~Idv~~   73 (77)
T d2uyzb1           2 YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQ   73 (77)
T ss_dssp             EEEEEEECTTCCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEEETTEECCTTCCHHHHTCCTTEEEEEEE
T ss_pred             EEEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCChhHEEEEECCEECCCCCCHHHcCCCCCCEEEEEE
Confidence            48889987 567888999999999999999999999999999999999999999999999999999998875


No 44 
>d1wf9a1 d.15.1.1 (A:8-101) NPL4-like protein 1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.32  E-value=3.9e-07  Score=69.71  Aligned_cols=69  Identities=19%  Similarity=0.160  Sum_probs=54.5

Q ss_pred             EEEEeCCeEEEEEecC-CCcHHHHHHHHHHHhCCCCCCcEEEEc-------------Ce--ecCCchhhhhcCCCCCCEE
Q 022980           59 INVARGPSQYEVHVPA-RSTFGDLKKAISEKTGLDPQEQKVLFR-------------GK--EKEDNEHLDVSGMKDKSKV  122 (289)
Q Consensus        59 V~Vk~g~~~~~V~V~a-~sTvgdLK~~I~e~TGvpp~~QKLiyk-------------GK--~ldd~~~L~~~GVKdgskL  122 (289)
                      |+|......+.|+|+. ..||++||..|++..+||.+.|.|--.             +-  ..+|..+|+++||.+||-|
T Consensus         3 iRiRsrdG~eRv~v~~~~~Tl~~LK~~Ie~~L~VPv~~Q~LSl~~~llL~k~P~~~~~~~~l~d~~~~L~sl~i~hGsiv   82 (94)
T d1wf9a1           3 LRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMV   82 (94)
T ss_dssp             EEEECSSCEEEEEECCTTSBHHHHHHHHHHHSCCCTTTCCCBSSGGGGTCCSHHHHTTCCSSCCTTCBGGGTCCCTTCEE
T ss_pred             EEEEecCCceEEEecCCCCcHHHHHHHHHHHhCCCcccceeecChhhhccCCccccchhhhccCCccCHHHcCccCceEE
Confidence            4444444478888875 679999999999999999999998321             22  2578889999999999999


Q ss_pred             EEEee
Q 022980          123 LLLEE  127 (289)
Q Consensus       123 ~Lv~~  127 (289)
                      +|.-+
T Consensus        83 yL~y~   87 (94)
T d1wf9a1          83 YLAYE   87 (94)
T ss_dssp             ECCCS
T ss_pred             EEEee
Confidence            98743


No 45 
>d1wm3a_ d.15.1.1 (A:) SUMO-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17  E-value=4e-06  Score=60.64  Aligned_cols=68  Identities=21%  Similarity=0.341  Sum_probs=62.9

Q ss_pred             EEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEE
Q 022980           57 IRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL  124 (289)
Q Consensus        57 I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~L  124 (289)
                      |+|+|+. .+..+.+.|...+++.-|....++..|+++...+++|.|..++...+..++|+.+|+.|-+
T Consensus         2 I~lkv~~~~g~~v~f~vk~~t~l~kl~~~y~~~~~~~~~~~~f~fdG~~i~~~~Tp~~l~med~D~Idv   70 (72)
T d1wm3a_           2 INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDV   70 (72)
T ss_dssp             EEEEEECTTSCEEEEEECTTSCTHHHHHHHHHHHTCCTTTCEEEETTEECCTTCCTTTTTCCTTEEEEE
T ss_pred             EEEEEECCCCCEEEEEEcCCChHHHHHHHHHHHhCCCccceEEEECCEEcCCCCCHHHcCCCCCCEEEE
Confidence            6788886 5677889999999999999999999999999999999999999999999999999999865


No 46 
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.26  E-value=0.00076  Score=49.35  Aligned_cols=64  Identities=9%  Similarity=0.188  Sum_probs=60.6

Q ss_pred             CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           64 GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        64 g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      ++.+..|.|.|.+|+.++-+..+...|+.+++--|.|.+|.+|-+.+++-.|+-+|++|-|+..
T Consensus         9 ~~rR~~VKvtP~t~l~~VL~eaC~k~~~~~~~~~Lkh~~k~ldLsl~~R~sgLpnnakLELv~~   72 (76)
T d2al3a1           9 NGRRHTVKVTPSTVLLQVLEDTCRRQDFNPSEYDLKFQRTVLDLSLQWRFANLPNNAKLEMVPV   72 (76)
T ss_dssp             TSCEEEECCCTTSBHHHHHHHHHHHTTCCGGGCEEEETTEEESSSCBHHHHCCCSSCEEEEECS
T ss_pred             CCcEEEEEeCCCcCHHHHHHHHHHHhCCChhHceeeeCCEEcCccceeeecCCCCCCEEEEEEc
Confidence            4578999999999999999999999999999999999999999999999999999999999863


No 47 
>d1h8ca_ d.15.1.2 (A:) Fas-associated factor 1, Faf1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10  E-value=0.014  Score=41.97  Aligned_cols=71  Identities=18%  Similarity=0.234  Sum_probs=55.9

Q ss_pred             CCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEE--EcCeec---CCchhhhhcCCCCCCEEEEE
Q 022980           54 GPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVL--FRGKEK---EDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        54 ~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLi--ykGK~l---dd~~~L~~~GVKdgskL~Lv  125 (289)
                      .+..+|.|+. +|.+..-.+++++|+++|..-|... +.++....|+  |-.+.+   |.+.+|.++|+-+.+.|++=
T Consensus         3 e~~~~i~iRlPdG~~~~~~F~~~~tl~~v~~~v~~~-~~~~~~~~l~~~~Pr~~l~~~d~~~TL~e~gL~p~~~L~vq   79 (82)
T d1h8ca_           3 EPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASK-GFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLE   79 (82)
T ss_dssp             CCCEEEEEECTTSCEEEEEECTTSBHHHHHHHHHHH-TCCSSSEEEEETTTTEETTTCCTTSBHHHHCCCSEEEEEEE
T ss_pred             CCcEEEEEECCCCCEEEEEECCCCcHHHHHHHHHhc-CCCCCceEEEecCcccccccccccCCHHHCCCCCCCEEEEE
Confidence            3556677775 4577888999999999999999874 7788777776  455664   56789999999999888864


No 48 
>d1vjka_ d.15.3.1 (A:) Molybdopterin synthase subunit MoaD {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.84  E-value=0.031  Score=40.12  Aligned_cols=66  Identities=17%  Similarity=0.308  Sum_probs=49.2

Q ss_pred             cEEEEEEe--------CCeEEEEEecCCCcHHHHHHHHHHHhCC-----------CCCCcEEEEcCeecCCchhhhhcCC
Q 022980           56 VIRINVAR--------GPSQYEVHVPARSTFGDLKKAISEKTGL-----------DPQEQKVLFRGKEKEDNEHLDVSGM  116 (289)
Q Consensus        56 ~I~V~Vk~--------g~~~~~V~V~a~sTvgdLK~~I~e~TGv-----------pp~~QKLiykGK~ldd~~~L~~~GV  116 (289)
                      +|+|+|++        |.....++++..+|+++|.+.|.+..+-           .....++..+|+..+++     +-|
T Consensus         1 smkI~v~~Fa~lre~~G~~~~~~~~~~~~Tv~~l~~~L~~~~~~~~~~l~~~~~~~~~~i~iavN~~~~~~d-----~~L   75 (88)
T d1vjka_           1 SVKVKVKYFARFRQLAGVDEEEIELPEGARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIAVNGRYVSWD-----EEL   75 (88)
T ss_dssp             CEEEEEEECTHHHHHHSSSEEEEEECTTCBHHHHHHHHHHHCGGGGGSCBCSSSCTTSSBEEEETTBCCCTT-----CBC
T ss_pred             CeEEEEEEhHHHHHHhCCCeEEEECCCCCCHHHHHHHHHHHChHHHHHhhhccccccccEEEEEcceEcCCC-----cCc
Confidence            48899987        5667889999999999999999887532           12334566677775543     347


Q ss_pred             CCCCEEEEEe
Q 022980          117 KDKSKVLLLE  126 (289)
Q Consensus       117 KdgskL~Lv~  126 (289)
                      ++||.|.++-
T Consensus        76 ~~gDevai~P   85 (88)
T d1vjka_          76 KDGDVVGVFP   85 (88)
T ss_dssp             CTTCEEEEES
T ss_pred             CCCCEEEEeC
Confidence            9999998873


No 49 
>d2cr5a1 d.15.1.2 (A:8-103) UBX domain-containing protein 6 (Reproduction 8) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.38  E-value=0.058  Score=39.52  Aligned_cols=73  Identities=10%  Similarity=0.024  Sum_probs=55.3

Q ss_pred             CCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEc--Ceec--CCchhhhhcCCCCCCEEEEEe
Q 022980           53 GGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFR--GKEK--EDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        53 ~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiyk--GK~l--dd~~~L~~~GVKdgskL~Lv~  126 (289)
                      ..+.++|.|+. +|.++.-.+..++||++|..-|... +..+..-.|+..  .+.+  +.+.+|.++||.+...|+|-.
T Consensus        13 ~~~~~~i~iRlPdG~r~~r~F~~~dtl~~l~~fv~~~-~~~~~~f~l~~~~Pr~~~~~d~~~TL~e~gl~p~~~L~v~~   90 (96)
T d2cr5a1          13 AEEVVTVALRCPNGRVLRRRFFKSWNSQVLLDWMMKV-GYHKSLYRLSTSFPRRALEVEGGSSLEDIGITVDTVLNVEE   90 (96)
T ss_dssp             CSSEEEEEEECTTSCEEEEEEESSSBTHHHHHHHHHH-TCCTTTEEEECSSSCCBCCCCSSCBHHHHTCSSCEEEEEEE
T ss_pred             CCCeEEEEEECCCCCEEEEEECCcccHHHHHHHHHHh-ccCcccceeecCCCceecCccCCCcHHHCCCCCCCEEEEec
Confidence            44678888886 5678889999999999999999765 445555666643  3443  557899999999988887654


No 50 
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.37  E-value=0.059  Score=39.20  Aligned_cols=47  Identities=15%  Similarity=0.258  Sum_probs=41.2

Q ss_pred             CCCcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEc
Q 022980           53 GGPVIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFR  101 (289)
Q Consensus        53 ~~~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiyk  101 (289)
                      ....|+|++.+++..+.+.||++.++.+|++.|+..+++..  .+|-|+
T Consensus         9 ~~~~ikVKv~~~~D~~~~~l~~~it~~dL~~kI~~rf~~~~--~~lkY~   55 (85)
T d1ip9a_           9 GLKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRIDTDN--FKLQTK   55 (85)
T ss_dssp             CCCCEEEEECBTTCCEEEEECSCCCHHHHHHHHHHHHTSSC--EEEEEC
T ss_pred             CCCCEEEEEEECCcEEEEEeCCCCCHHHHHHHHHHHhCCCc--eEEEEE
Confidence            45679999999999999999999999999999999998754  577676


No 51 
>d1i42a_ d.15.1.2 (A:) p47 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.15  E-value=0.091  Score=38.19  Aligned_cols=69  Identities=12%  Similarity=0.241  Sum_probs=52.2

Q ss_pred             CCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHH-hCCCCCCcEEEEc--Cee-cCCchhhhhcCCCCCCEEE
Q 022980           54 GPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEK-TGLDPQEQKVLFR--GKE-KEDNEHLDVSGMKDKSKVL  123 (289)
Q Consensus        54 ~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~-TGvpp~~QKLiyk--GK~-ldd~~~L~~~GVKdgskL~  123 (289)
                      .|..+|.|+. +|.+....+++++||++|...|... .+.+...-.|+..  -|. .|++.+|.++|+.+ +.|+
T Consensus        12 ~p~t~I~iRlPdG~~~~~~F~~~~tl~dv~~~v~~~~~~~~~~~f~L~t~~Prr~l~d~~~TL~e~gL~~-s~vl   85 (89)
T d1i42a_          12 EPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLLN-AVIV   85 (89)
T ss_dssp             SCCEEEEEEETTTCCEEEEECSSSCGGGHHHHHHHHCTTTSSCCEEEEETTTTEECCCCSSCSGGGTTCC-SEEE
T ss_pred             CCcEEEEEEcCCCCEEEEEECCchhHHHHHHHHHHhCccCCCCCEEEecCCCCcccCCCcCcHHHCCCcC-ceEE
Confidence            4556666665 4678889999999999999999875 4666667778765  344 47789999999995 4443


No 52 
>d1wj4a_ d.15.1.2 (A:) Hypothetical protein KIAA0794 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.41  E-value=0.16  Score=39.03  Aligned_cols=74  Identities=16%  Similarity=0.293  Sum_probs=56.6

Q ss_pred             CCCCcEEEEEEe-CCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEE--cCeec---CCchhhhhcCCCCCCEEEEE
Q 022980           52 SGGPVIRINVAR-GPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLF--RGKEK---EDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        52 ~~~~~I~V~Vk~-g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiy--kGK~l---dd~~~L~~~GVKdgskL~Lv  125 (289)
                      +..|..+|.|+. +|.++...|+.++||.+|...|... +.....-.|+.  --+.+   |...+|.++||-+...|+|-
T Consensus        39 ~~~p~~~l~iRlPdG~r~~r~F~~~~tl~~l~~~v~~~-~~~~~~~~L~~~fPr~~l~~~d~~~TL~e~gL~P~~~L~ve  117 (124)
T d1wj4a_          39 VNGPKAQLMLRYPDGKREQITLPEQAKLLALVKHVQSK-GYPNERFELLTNFPRRKLSHLDYDITLQEAGLCPQETVFVQ  117 (124)
T ss_dssp             CSSCEEEEEEECTTSCEEEEEEETTSCHHHHHHHHHHH-HCCTTTEEEECSSSCCEETSSCSSSCTTTTTCCSSBCCEEE
T ss_pred             CCCCceEEEEECCCCCEEEEEeCCCCcHHHHHHHHHhc-ccCCcceEEeecccccccccccccCcHHHcCCCCCCEEEEE
Confidence            355677888886 5678889999999999999999765 45666666653  33443   56789999999999988765


Q ss_pred             e
Q 022980          126 E  126 (289)
Q Consensus       126 ~  126 (289)
                      +
T Consensus       118 e  118 (124)
T d1wj4a_         118 E  118 (124)
T ss_dssp             E
T ss_pred             e
Confidence            4


No 53 
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.64  E-value=0.2  Score=36.72  Aligned_cols=45  Identities=18%  Similarity=0.338  Sum_probs=35.9

Q ss_pred             CCcEEEEEEeCCeEEE--EEecCCCcHHHHHHHHHHHhCCCCCCcEEEE
Q 022980           54 GPVIRINVARGPSQYE--VHVPARSTFGDLKKAISEKTGLDPQEQKVLF  100 (289)
Q Consensus        54 ~~~I~V~Vk~g~~~~~--V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiy  100 (289)
                      .|.|+|+|.+++.+..  +++|...++.+|+..|...++++  ...|-|
T Consensus         2 ep~vtvKvtf~~dt~RF~ls~~~~~~~~~L~~~i~~rf~l~--~~~lkY   48 (85)
T d2bkfa1           2 EPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLN--TIQIKY   48 (85)
T ss_dssp             CCCEEEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHTCS--SEEEEE
T ss_pred             CccEEEEEEECCceEEEEecCCCCCcHHHHHHHHHHhcCcc--cceEEE
Confidence            3679999999998855  55667789999999999999985  334444


No 54 
>d1oeya_ d.15.2.2 (A:) Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.17  E-value=0.31  Score=35.44  Aligned_cols=44  Identities=14%  Similarity=0.239  Sum_probs=39.6

Q ss_pred             EEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEc
Q 022980           57 IRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFR  101 (289)
Q Consensus        57 I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiyk  101 (289)
                      .+|+|.+. -++.|.+++...+++|+.+|+++..++++.-+|-|+
T Consensus         6 ~~vkVh~~-fTVal~v~~G~~y~~L~~lvs~KL~l~~~~~~LSY~   49 (82)
T d1oeya_           6 YTLKVHYK-YTVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLSYR   49 (82)
T ss_dssp             EEEEEESS-SEEEEEECTTCCHHHHHHHHHHHTTCCGGGCCEEEC
T ss_pred             EEEEEEEE-EEEEEEccCCCCHHHHHHHHHHHhCCChhheEEEec
Confidence            56677665 678899999999999999999999999999999997


No 55 
>d1xo3a_ d.15.3.3 (A:) C9orf74 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.88  E-value=0.46  Score=34.93  Aligned_cols=69  Identities=19%  Similarity=0.239  Sum_probs=44.2

Q ss_pred             CcEEEEEEeCC---------eEEEEEecCC---CcHHHHHHHHHHHhCCCCCC-----------cEEEEcCeecCCchhh
Q 022980           55 PVIRINVARGP---------SQYEVHVPAR---STFGDLKKAISEKTGLDPQE-----------QKVLFRGKEKEDNEHL  111 (289)
Q Consensus        55 ~~I~V~Vk~g~---------~~~~V~V~a~---sTvgdLK~~I~e~TGvpp~~-----------QKLiykGK~ldd~~~L  111 (289)
                      +.|+|+|++.|         ..|.+.++..   .||++|-+.|+....-...+           ..++.+|...   ..|
T Consensus         3 ~~m~V~V~F~g~L~~lf~~~r~~~v~l~~~~~~~TV~dll~~L~~~~p~~~~~l~~~~~~lr~~v~v~vN~~di---~~l   79 (101)
T d1xo3a_           3 APLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADW---ELL   79 (101)
T ss_dssp             SSCEEEEEECSSGGGGGTTCCCEEEECCSSSCCCCHHHHHHHHHHHHCCSCGGGSCCTTSCCSSEEEEETTEEH---HHH
T ss_pred             CCeEEEEEEechHHHHhCCcceEEEEcCCCCCCcCHHHHHHHHHHhCCcchhhhhccCcCeeeeEEEEEcCcce---ecc
Confidence            45778888733         4578888754   59999999998876533211           1233344321   122


Q ss_pred             h--hcCCCCCCEEEEEe
Q 022980          112 D--VSGMKDKSKVLLLE  126 (289)
Q Consensus       112 ~--~~GVKdgskL~Lv~  126 (289)
                      .  ++-|++||.|.++-
T Consensus        80 ~gl~t~l~dgDeV~~~p   96 (101)
T d1xo3a_          80 GELDYQLQDQDSILFIS   96 (101)
T ss_dssp             TTTSCCCCTTCEEEEEE
T ss_pred             CCCccCcCCCCEEEEeC
Confidence            2  56799999999884


No 56 
>d1wgya_ d.15.1.5 (A:) Rap guanine nucleotide exchange factor 5, RapGEF5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.43  E-value=2  Score=32.21  Aligned_cols=76  Identities=16%  Similarity=0.253  Sum_probs=53.7

Q ss_pred             CCCCcEEEEEEeCCeE-EEEEecCCCcHHHHHHHHHHHhCCCCCCcEEE---EcCee--cCCchhhhhcCCCCCCEEEEE
Q 022980           52 SGGPVIRINVARGPSQ-YEVHVPARSTFGDLKKAISEKTGLDPQEQKVL---FRGKE--KEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        52 ~~~~~I~V~Vk~g~~~-~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLi---ykGK~--ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      .++..|...|-.-..+ .+|.+|..+|+.++++.++++.+.+.++..|+   +.|-.  +.+++.--.-.+.-+++|++.
T Consensus         5 ss~dei~~~VY~~Dhsy~tlr~~v~~sa~eI~~~vaeKl~~~~e~L~LV~V~SsGEr~~lkp~d~sV~TsL~lN~rLFvc   84 (104)
T d1wgya_           5 SSGEEIFCHVYITEHSYVSVKAKVSSIAQEILKVVAEKIQYAEEDLALVAITFSGEKHELQPNDLVISKSLEASGRIYVY   84 (104)
T ss_dssp             CCSSCCCEEEECSSSCEEEECCCTTCBSHHHHHHHHHHHTSCGGGEEEEEECSSCCCCBCCTTSBSSCCSSCSSCEEEEE
T ss_pred             CCCCeEEEEEEecCCcEEEEEeeccCcHHHHHHHHHHHhCCCCCceEEEEEccCCcEEeeCccceeEEeeeeecceEEEe
Confidence            4667787788764444 57999999999999999999999998876664   44543  444333222334558999987


Q ss_pred             ee
Q 022980          126 EE  127 (289)
Q Consensus       126 ~~  127 (289)
                      ..
T Consensus        85 ~~   86 (104)
T d1wgya_          85 RK   86 (104)
T ss_dssp             EC
T ss_pred             ch
Confidence            53


No 57 
>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.88  E-value=5.1  Score=28.71  Aligned_cols=39  Identities=13%  Similarity=0.213  Sum_probs=36.1

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCC
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQ   94 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~   94 (289)
                      .|+|++.|+|...-.++++..|+.+|-+.+.+..+++.+
T Consensus         1 ~iriK~~y~G~i~it~~~~~it~e~l~~evr~~C~f~~~   39 (83)
T d1wmha_           1 QVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNE   39 (83)
T ss_dssp             CEEEEEEETTEEEEEEECTTCCHHHHHHHHHHHTTCCTT
T ss_pred             CeEEEEEecCeEEEEecCCCccHHHHHHHHHHHhCCCcC
Confidence            378888899999999999999999999999999999876


No 58 
>d1fm0d_ d.15.3.1 (D:) Molybdopterin synthase subunit MoaD {Escherichia coli [TaxId: 562]}
Probab=72.92  E-value=4  Score=28.21  Aligned_cols=57  Identities=14%  Similarity=0.183  Sum_probs=37.7

Q ss_pred             CCeEEEEEecCCCcHHHHHHHHHHHhC-----CCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           64 GPSQYEVHVPARSTFGDLKKAISEKTG-----LDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        64 g~~~~~V~V~a~sTvgdLK~~I~e~TG-----vpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      |.....+.++ ..|+.+|++.|.+...     +.....++..++...+++..     |++|+.|-++-
T Consensus        15 G~~~~~~~~~-~~tv~~l~~~L~~~~~~~~~~l~~~~~~vavn~~~~~~~~~-----l~~gdevAi~P   76 (81)
T d1fm0d_          15 GTDATEVAAD-FPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVSFDHP-----LTDGDEVAFFP   76 (81)
T ss_dssp             TCSEEEECSC-CSBHHHHHHHHHTTCHHHHHHHCCTTCEEEETTEECCTTCB-----CCTTCEEEEEC
T ss_pred             CCCeEEecCC-CCCHHHHHHHHHHhCchHHHHhcCCcEEEecCceecCCCCC-----cCCCCEEEEEC
Confidence            5445556654 4589999999876532     33344566667776554443     79999999884


No 59 
>d1y8xb1 c.111.1.2 (B:349-440) UBA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.13  E-value=3.7  Score=30.06  Aligned_cols=58  Identities=10%  Similarity=0.258  Sum_probs=40.7

Q ss_pred             EEEecCCCcHHHHHHHHHHHhCCCCC----------CcEEEEcCee--cC------CchhhhhcCCCCCCEEEEEe
Q 022980           69 EVHVPARSTFGDLKKAISEKTGLDPQ----------EQKVLFRGKE--KE------DNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        69 ~V~V~a~sTvgdLK~~I~e~TGvpp~----------~QKLiykGK~--ld------d~~~L~~~GVKdgskL~Lv~  126 (289)
                      .|+|++..|+.+|-+.|++.-.+.-.          .+|-+|=-..  ++      -..+|.++|+.+|+.|++..
T Consensus         4 ~l~~~~~~TL~~li~~L~e~p~~qlk~Psltt~~~g~~ktLYm~~pp~Lee~Tr~NL~k~L~eLgl~dG~ei~VtD   79 (92)
T d1y8xb1           4 NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYMQSVTSIEERTRPNLSKTLKELGLVDGQELAVAD   79 (92)
T ss_dssp             CEECCTTCBHHHHHHHHHHCTTCCCSSCEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGGTCCTTCEEEEEC
T ss_pred             eEEcCCCCcHHHHHHHHhhChHhhccCCceeeecCCCccEEEecCcHHHHHHhhhccccCHHHhCCcCCCEEEEec
Confidence            57899999999999999997433321          2444443322  22      24579999999999998653


No 60 
>d1ef1a3 d.15.1.4 (A:4-87) Moesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.01  E-value=33  Score=23.71  Aligned_cols=68  Identities=16%  Similarity=0.226  Sum_probs=49.9

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCC-CcEEEEc---Cee--cCCchhhhhcCCCCCCEEE
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQ-EQKVLFR---GKE--KEDNEHLDVSGMKDKSKVL  123 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~-~QKLiyk---GK~--ldd~~~L~~~GVKdgskL~  123 (289)
                      +|+|.|..-...+.+.|...++..+|=.+++...||... --=|-|.   |..  ++.+..|....++.+..+.
T Consensus         1 t~~v~V~~LD~~~~~~v~~~a~G~~l~~~Vc~~l~L~E~dYFGL~y~d~~~~~~WLd~~k~l~kq~~~~~~~~~   74 (84)
T d1ef1a3           1 TISVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKGFSTWLKLNKKVTAQDVRKESPLL   74 (84)
T ss_dssp             CEEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHTCCCGGGEEEEEEBTTSCEEECCSSSBGGGSCBCCCSSEE
T ss_pred             CEEEEEEEcCCEEEEEEcCCChHHHHHHHHHHHcCCcccccceEEEECCCCCeEeccCCCchhhhccCCCCCEE
Confidence            477888864446899999999999999999999999743 2334443   332  7888888887666655443


No 61 
>d1wgra_ d.15.1.5 (A:) Growth factor receptor-bound protein 7, GRB-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.56  E-value=17  Score=25.91  Aligned_cols=68  Identities=16%  Similarity=0.169  Sum_probs=43.5

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEE---c--C--eecCCch-hh---hhcCCCCCCEEEE
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLF---R--G--KEKEDNE-HL---DVSGMKDKSKVLL  124 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiy---k--G--K~ldd~~-~L---~~~GVKdgskL~L  124 (289)
                      .|+|... +|.+..|.|++.+|..||-+.|+++.++.....=.||   .  |  +.+.|.+ +|   ...+.....++++
T Consensus        11 vvkv~~~-dg~~k~l~V~~~tTa~eV~~~l~~K~~~~~~~~f~L~E~~~~~~leR~L~d~E~vl~v~~~W~~~~~~r~v~   89 (100)
T d1wgra_          11 VVKVYSE-DGACRSVEVAAGATARHVCEMLVQRAHALSDETWGLVECHPHLALERGLEDHESVVEVQAAWPVGGDSRFVF   89 (100)
T ss_dssp             EEEEEET-TSCEEEEEECTTCCHHHHHHHHHCSSSCCCCCCCCEEEEETTTTEEEEECSSSCHHHHHTTSCSSSCCEEEE
T ss_pred             EEEEEec-CCCEEEEEECCCCcHHHHHHHHHHHhCCCCCCCeEEEEecCCCcceeecCchHhHHHHHHcCCCCCCCEEEE
Confidence            3444443 4567789999999999999999999998754321222   1  3  4466655 33   3334445555554


No 62 
>d1zud21 d.15.3.2 (2:2-66) Thiamin biosynthesis sulfur carrier protein ThiS {Escherichia coli [TaxId: 562]}
Probab=49.72  E-value=30  Score=22.64  Aligned_cols=53  Identities=13%  Similarity=0.159  Sum_probs=39.8

Q ss_pred             EEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           69 EVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        69 ~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      ++.+++..|+.+|=+.    .++++...-+-++|....- ......-+++||+|-++.
T Consensus         8 ~~~~~~~~tl~~ll~~----l~~~~~~vaV~vN~~ivpk-~~~~~~~L~~gD~ieIv~   60 (65)
T d1zud21           8 AMQCAAGQTVHELLEQ----LDQRQAGAALAINQQIVPR-EQWAQHIVQDGDQILLFQ   60 (65)
T ss_dssp             EECCCTTCBHHHHHHH----HTCCCTTEEEEETTEECCG-GGTTTCBCCTTCEEEEEE
T ss_pred             EEEcCCCCcHHHHHHH----cCCCCCcEEEEECCEEcCH-HHHhhccCCCCCEEEEEE
Confidence            4566788899988654    6899888888899987322 335566789999998874


No 63 
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3,  MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.76  E-value=21  Score=25.07  Aligned_cols=44  Identities=9%  Similarity=0.200  Sum_probs=37.5

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcC
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRG  102 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykG  102 (289)
                      .++|++-|.|++.-|.++..-.+.||...+...+|-+-+   |.|-.
T Consensus         2 dvRVKfE~~gEkRIi~f~RPv~~~dl~~kv~~afGq~ld---l~y~n   45 (80)
T d2c60a1           2 DVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFGQPLD---LHYMN   45 (80)
T ss_dssp             CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHSSCCE---EEEEC
T ss_pred             CcEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCeee---eEEec
Confidence            378888899999999999999999999999999996654   55543


No 64 
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2,  MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.55  E-value=23  Score=25.01  Aligned_cols=39  Identities=13%  Similarity=0.196  Sum_probs=34.8

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCC
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQ   94 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~   94 (289)
                      .++|++-|.|++.-|.++..-.+.||.+.+...+|-+-+
T Consensus         2 dvRVKfE~~gEkRIi~f~RPv~~~dl~~kv~~afGq~ld   40 (82)
T d2nptb1           2 DVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQSMD   40 (82)
T ss_dssp             CEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHTSCEE
T ss_pred             CcEEEEEecCceEEEecCCCccHHHHHHHHHHHhCCeee
Confidence            378888899999999999999999999999999996543


No 65 
>d1f2ri_ d.15.2.1 (I:) Inhibitor of caspase-activated DNase (ICAD), DFF45, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.96  E-value=49  Score=24.01  Aligned_cols=65  Identities=18%  Similarity=0.268  Sum_probs=44.8

Q ss_pred             EEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCC--CcEEEE--cCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           60 NVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQ--EQKVLF--RGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        60 ~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~--~QKLiy--kGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      .|.........-|-+ .++.||+.+.++.++|+..  ..+|++  .|.+.|+.+++..  +-++..+|++..
T Consensus        22 ~v~~~~~~~r~GV~A-~SL~eL~~K~~~~l~i~~~~~~v~lvLeeDGTeVd~EeYF~t--Lp~nT~lm~L~~   90 (100)
T d1f2ri_          22 LLRRNHSRDQHGVAA-SSLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDYFLC--LPSNTKFVALAC   90 (100)
T ss_dssp             EEEETTEEEEEEEEE-SSHHHHHHHHHHHHCCCGGGCSCEEEESSSCCBCCSSSSSSS--SCSCCEEEEECS
T ss_pred             eeccCCCcceeeEEc-CCHHHHHHHHHHHhCCCCCccceEEEEeCCCcEEccHHHHhc--CCCCCEEEEECC
Confidence            344333333334434 4799999999999999743  345543  6888999888766  677888888863


No 66 
>d2i1sa1 d.343.1.1 (A:4-188) Hypothetical protein MM3350 {Methanosarcina mazei [TaxId: 2209]}
Probab=40.98  E-value=38  Score=26.42  Aligned_cols=31  Identities=29%  Similarity=0.305  Sum_probs=27.3

Q ss_pred             eEEEEEecCCCcHHHHHHHHHHHhCCCCCCc
Q 022980           66 SQYEVHVPARSTFGDLKKAISEKTGLDPQEQ   96 (289)
Q Consensus        66 ~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~Q   96 (289)
                      .+..|.||++.|+.+|=..|+..+|..-...
T Consensus        19 IWRri~V~~~~tl~~LH~vIq~afgw~~~HL   49 (185)
T d2i1sa1          19 IWRRIQVPENYTFLDLHKAIQAVMDWEDYHL   49 (185)
T ss_dssp             EEEEEEEETTCBHHHHHHHHHHHTTCCCCSC
T ss_pred             ceEEEEECCCCcHHHHHHHHHHHhccCCCee
Confidence            4688999999999999999999999876543


No 67 
>d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]}
Probab=37.61  E-value=17  Score=25.38  Aligned_cols=29  Identities=17%  Similarity=0.205  Sum_probs=24.8

Q ss_pred             CcEEEEEEeCCeEEEEEecCCCcHHHHHH
Q 022980           55 PVIRINVARGPSQYEVHVPARSTFGDLKK   83 (289)
Q Consensus        55 ~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~   83 (289)
                      .+|.|.+.-+|+.|.+++++..++.++=.
T Consensus         2 ~~~~i~~~vNG~~~~~~~~~~~~Ll~~LR   30 (81)
T d1t3qa2           2 QLMRISATINGKPRVFYVEPRMHLADALR   30 (81)
T ss_dssp             CCEEEEEEETTEEEEEEECTTSBHHHHHH
T ss_pred             CeEEEEEEECCEEEEEecCCCCCHHHHHh
Confidence            46888888899999999999999887644


No 68 
>d1h4ra3 d.15.1.4 (A:20-103) Merlin {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.56  E-value=58  Score=22.36  Aligned_cols=69  Identities=9%  Similarity=0.082  Sum_probs=49.3

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCC---cEEEEcCee--cCCchhhhhcCCCCCCEEEE
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQE---QKVLFRGKE--KEDNEHLDVSGMKDKSKVLL  124 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~---QKLiykGK~--ldd~~~L~~~GVKdgskL~L  124 (289)
                      ++.|.|..-...+++.|...++..+|=.+++...||....   ...+-+|..  +|.+..|....++.+..+.+
T Consensus         2 ~~~v~V~lLD~~le~~v~~~a~G~~L~d~Vc~~L~L~E~~YFGL~y~~~~~~~WLd~~k~l~kq~~~~~~~~~~   75 (84)
T d1h4ra3           2 TFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTF   75 (84)
T ss_dssp             EEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCCGGGEEEEEEETTEEEECCTTSBGGGSSCCCSSSEEE
T ss_pred             eEEEEEEEcCCcEEEEEcCCChHHHHHHHHHHHcCCcccccceEEEecCCceEEccCCCchhhhccCCCCCEEE
Confidence            4667777522357999999999999999999999996432   222334543  78888888887776665543


No 69 
>d1v8ca1 d.15.3.1 (A:1-87) MoaD-related protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=36.96  E-value=42  Score=22.71  Aligned_cols=56  Identities=14%  Similarity=0.288  Sum_probs=35.2

Q ss_pred             EEEecCCCcHHHHHHHHHHHhC-C---------CCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           69 EVHVPARSTFGDLKKAISEKTG-L---------DPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        69 ~V~V~a~sTvgdLK~~I~e~TG-v---------pp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      .+++++ +|+++|...|.+... +         ......+..+|+...+..-+ +.-|++||.|.++.
T Consensus        17 e~~v~~-~Tv~~ll~~L~~~~p~l~~~l~~~~~~~~~v~i~vng~~i~~~~~~-~~~l~~gdeV~i~P   82 (87)
T d1v8ca1          17 QLELPG-ATVGEVLENLVRAYPALKEELFEGEGLAERVSVFLEGRDVRYLQGL-STPLSPGATLDLFP   82 (87)
T ss_dssp             EEECCC-SBHHHHHHHHHHHCGGGHHHHEETTEECTTCEEEETTEEGGGTTGG-GCBCCTTCEEEEEC
T ss_pred             EEEEcC-CCHHHHHHHHHHHCHHHHHHhcccccccceEEEEEcCeeeecccCC-cccCCCCCEEEEEC
Confidence            466765 599999999988652 1         01234566677754321111 23479999999884


No 70 
>d2qamt1 d.12.1.1 (T:1-93) Ribosomal protein L23 {Escherichia coli [TaxId: 562]}
Probab=36.03  E-value=11  Score=27.22  Aligned_cols=42  Identities=17%  Similarity=0.277  Sum_probs=36.2

Q ss_pred             CeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcE-EEEcCeecC
Q 022980           65 PSQYEVHVPARSTFGDLKKAISEKTGLDPQEQK-VLFRGKEKE  106 (289)
Q Consensus        65 ~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QK-LiykGK~ld  106 (289)
                      ...|.+.|+..+|=-++|+.|+..+||.+.... +.++||.+.
T Consensus        27 ~n~ytF~V~~~AtK~eIK~ave~~f~VkV~~Vnt~~~~gK~kr   69 (93)
T d2qamt1          27 SNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKR   69 (93)
T ss_dssp             SSCCCEEECSSCCSHHHHHHHHHTTCCCCCCCCCEEECCCEEC
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHhCCcceEEEEEEeCCceeE
Confidence            357899999999999999999999999998766 668888743


No 71 
>d1j0ga_ d.15.1.6 (A:) Hypothetical protein 1810045k17 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.72  E-value=68  Score=22.62  Aligned_cols=61  Identities=13%  Similarity=0.165  Sum_probs=51.3

Q ss_pred             eEE-EEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCee-cCCchhhhhcCCCCCCEEEEEe
Q 022980           66 SQY-EVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKE-KEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        66 ~~~-~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~-ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      .-| .+.||..+.|..+-+..++.+.|++..--+|-+... .....+-...=+|.|+.|-|+.
T Consensus        23 lpfkvlsVpE~aPftAVlkfaAEeFkV~~~TSAiITndGvGINP~QtAg~vFlKhGselrliP   85 (92)
T d1j0ga_          23 LPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIP   85 (92)
T ss_dssp             CCEEEEEEETTSBHHHHHHHHHHHTTCCSSSEEEECTTSCCCCCSSBHHHHHHHTCSEEEEEE
T ss_pred             CccEEEecCccCchHHHHHHHHHHcCCCccceeEEecCccccChhhccchhhhhcCceeeecc
Confidence            334 479999999999999999999999988888877666 7777777777789999999984


No 72 
>d1vlba2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=34.14  E-value=27  Score=24.29  Aligned_cols=67  Identities=15%  Similarity=0.208  Sum_probs=40.4

Q ss_pred             cEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCC-------CcEEEEcCeecCCchhhh-hcCCCCCCEEEE
Q 022980           56 VIRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQ-------EQKVLFRGKEKEDNEHLD-VSGMKDKSKVLL  124 (289)
Q Consensus        56 ~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~-------~QKLiykGK~ldd~~~L~-~~GVKdgskL~L  124 (289)
                      +|++.+.-++..+.+++++..++.++=..-...||.-..       .=-++..|+....  -|- .+.+.||..|.=
T Consensus         1 M~~~~~~lNG~~~~~~v~~~~~Lld~LR~~lgltg~K~gC~~G~CGACtVlvdG~~v~S--Cl~~~~~~adG~~I~T   75 (80)
T d1vlba2           1 MIQKVITVNGIEQNLFVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRA--CVTKMKRVADGAQITT   75 (80)
T ss_dssp             CEEEEEEETTEEEEEEECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETTEEEEG--GGCBGGGSCTTCEEEC
T ss_pred             CceEEEEECCEEEEEecCCCCCHHHHHhHhhCCcccccCcCcCCCCeeEEEECCcEEec--hhhhHHHHcCCCEEEE
Confidence            477788888899999999999998864432234444321       1145667766432  121 223456776653


No 73 
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.47  E-value=37  Score=23.79  Aligned_cols=44  Identities=14%  Similarity=0.234  Sum_probs=24.8

Q ss_pred             chhhhhhHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 022980          191 SEELDTSAELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLK  239 (289)
Q Consensus       191 eke~~~LsE~LM~~LLKLD~Ie~eGdaR~~RK~~VkrVQ~~Le~LD~lk  239 (289)
                      +.+|..|+..|++.|-.+-..  .|+   .||..|+.|..-|+..+.+-
T Consensus         4 E~~y~~l~a~i~~kl~~i~~~--~ge---erk~~l~~ie~~leEA~ell   47 (89)
T d1vcsa1           4 EQDFAVLTAEITSKIARVPRL--PPD---EKKQMVANVEKQLEEARELL   47 (89)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGS--CTT---THHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcC--Cch---HHHHHHHHHHHhHHHHHHHH
Confidence            346666667776665544332  232   55666666666665555544


No 74 
>d2zjrq1 d.12.1.1 (Q:2-94) Ribosomal protein L23 {Deinococcus radiodurans [TaxId: 1299]}
Probab=31.19  E-value=39  Score=24.00  Aligned_cols=57  Identities=21%  Similarity=0.308  Sum_probs=44.6

Q ss_pred             eEEEEEecCCCcHHHHHHHHHHHhCCCCCCcE-EEEcCeecCCchhhhhcCCCCCCEEEEE
Q 022980           66 SQYEVHVPARSTFGDLKKAISEKTGLDPQEQK-VLFRGKEKEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        66 ~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QK-LiykGK~ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      ..|.+.|+..+|=-++|+.|+..+||.+.... +.++||.+....   -.|-+.+-|-..+
T Consensus        22 n~y~F~V~~~atK~~Ik~ave~lf~VkV~~Vnt~~~~gK~kr~~~---~~g~~~~~KKAiV   79 (93)
T d2zjrq1          22 GVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGR---FIGQRNDRKKAIV   79 (93)
T ss_dssp             TCCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECCBCCCCCSSSS---CCCCCCCBEEEEE
T ss_pred             CEEEEEEeCCCCHHHHHHHHHHHcCCCeEEEEEEEeCCCceEECC---cceecCCCEEEEE
Confidence            46899999999999999999999999998766 467888854332   2466777765555


No 75 
>d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]}
Probab=30.13  E-value=63  Score=20.89  Aligned_cols=56  Identities=14%  Similarity=0.081  Sum_probs=39.9

Q ss_pred             CCeEEEEEecCC-CcHHHHHHHHHHHhCCCCCCcEEEEcCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           64 GPSQYEVHVPAR-STFGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        64 g~~~~~V~V~a~-sTvgdLK~~I~e~TGvpp~~QKLiykGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      +|+.  ++++.. .|+.+|-..    .+++++..-+-++|....- .....+-+++||+|-++.
T Consensus         5 NG~~--~~~~~~~~tl~~LL~~----l~~~~~~vAVevN~~iv~k-~~~~~~~L~~gD~IEIv~   61 (65)
T d1tygb_           5 NGKD--VKWKKDTGTIQDLLAS----YQLENKIVIVERNKEIIGK-ERYHEVELCDRDVIEIVH   61 (65)
T ss_dssp             TTEE--ECCSSSCCBHHHHHHH----TTCTTSCCEEEETTEEECG-GGTTTSBCCSSSEEEEEE
T ss_pred             CCEE--EEcCCCcccHHHHHHH----cCCCCCcEEEEECCEEcCH-HHcCcccCCCCCEEEEEE
Confidence            4444  456665 489988444    6888888888899987332 335667799999998874


No 76 
>d1ibxa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.21  E-value=65  Score=22.43  Aligned_cols=50  Identities=14%  Similarity=0.266  Sum_probs=37.9

Q ss_pred             CCCcHHHHHHHHHHHhCCCCCCcEEE-E-cCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           74 ARSTFGDLKKAISEKTGLDPQEQKVL-F-RGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        74 a~sTvgdLK~~I~e~TGvpp~~QKLi-y-kGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      +..++.||+.+.++.+++|...-+|. + .|.+. +++++..  +.++..+|++.
T Consensus        22 ~A~sL~eL~~K~~~~l~~~~~~~~lvLeeDGT~V-~EeYF~t--Lp~nT~lm~L~   73 (81)
T d1ibxa_          22 AGRSCQEVLRKGCLRFQLPERGSRLCLYEDGTEL-TEDYFPS--VPDNAELVLLT   73 (81)
T ss_dssp             CCSSHHHHHHHHHHHTTCCTTTSEEEESSSCSCC-CSSSCSS--CCSCCCEEEEC
T ss_pred             EcCCHHHHHHHHHHHhCCCCcCcEEEEecCCcEe-eHHHHhc--CCCCcEEEEEC
Confidence            33479999999999999987655543 3 68888 4566655  67888888886


No 77 
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.70  E-value=54  Score=24.49  Aligned_cols=24  Identities=13%  Similarity=0.346  Sum_probs=18.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH
Q 022980          216 EAKVQRKTEVRRVQKFHETLDNLK  239 (289)
Q Consensus       216 daR~~RK~~VkrVQ~~Le~LD~lk  239 (289)
                      ++...|...|++-..+|+.++.+-
T Consensus       102 ~~~~el~~~v~e~e~ll~~i~~~i  125 (129)
T d1ykhb1         102 EVEDEKIEAIKKKEKLMRHVDSMI  125 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            466777788888888888887764


No 78 
>d1e7ua3 d.15.1.5 (A:143-321) Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=27.58  E-value=88  Score=24.49  Aligned_cols=71  Identities=14%  Similarity=0.218  Sum_probs=48.5

Q ss_pred             CcEEEEEEeCCeEEEEEecCCCcHHHHHHHHHHH-------h----CCCCCCcEEEEcCee--cCCchhhhhcC-----C
Q 022980           55 PVIRINVARGPSQYEVHVPARSTFGDLKKAISEK-------T----GLDPQEQKVLFRGKE--KEDNEHLDVSG-----M  116 (289)
Q Consensus        55 ~~I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~-------T----Gvpp~~QKLiykGK~--ldd~~~L~~~G-----V  116 (289)
                      ..|.|.+......+++.|+.++|+.+|-+.+-..       .    +..|.+-.|=..|+.  +-.+.+|.+|-     +
T Consensus        76 ~~i~V~i~~~~~s~Tf~v~~~~tP~~lI~~~l~kl~k~~~~~~~~~~~~~~dyvLkv~G~~Eyl~~~~~L~~~~yIr~cl  155 (179)
T d1e7ua3          76 NCVFIVIHRSTTSQTIKVSADDTPGTILQSFFTKMAKKKSLMDIPESQNERDFVLRVCGRDEYLVGETPIKNFQWVRQCL  155 (179)
T ss_dssp             SEEEEEEESSSCEEEEEEETTCCHHHHHHHHHHHSCC-----------CCSCCEEEETTSSCBCCSSSCGGGBHHHHHHH
T ss_pred             CcEEEEEecCCccEEEEECCCCCHHHHHHHHHHHHHhhccccCccccCCcCceEEEecCceeeeECCeeeeccHHHHHHH
Confidence            3477777777788999999999999998766432       1    334556667677885  66777777773     3


Q ss_pred             CCCCEEEEE
Q 022980          117 KDKSKVLLL  125 (289)
Q Consensus       117 KdgskL~Lv  125 (289)
                      +.+-.+.|+
T Consensus       156 ~~~~~~~l~  164 (179)
T d1e7ua3         156 KNGEEIHLV  164 (179)
T ss_dssp             HHTCCEEEE
T ss_pred             hCCCCCEEE
Confidence            445555554


No 79 
>d1c9fa_ d.15.2.1 (A:) Caspase-activated DNase (CAD), DFF40, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.68  E-value=58  Score=23.03  Aligned_cols=64  Identities=13%  Similarity=0.291  Sum_probs=43.9

Q ss_pred             EEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEE-E-cCeecCCchhhhhcCCCCCCEEEEEe
Q 022980           57 IRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVL-F-RGKEKEDNEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        57 I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLi-y-kGK~ldd~~~L~~~GVKdgskL~Lv~  126 (289)
                      .+|.-.+...+|-|-   ..++.||+.+.++.++++...-+|. + .|.+. +++++..  +.++..+|++.
T Consensus        11 fKV~~~~r~~k~Gv~---A~sL~eL~~K~~~~l~i~~~~~~lvLeeDGT~V-dEeYF~t--Lp~nT~lm~L~   76 (87)
T d1c9fa_          11 VKLRALHSACKFGVA---ARSCQELLRKGCVRFQLPMPGSRLCLYEDGTEV-TDDCFPG--LPNDAELLLLT   76 (87)
T ss_dssp             EEEEETTSSCCCEEE---ESSHHHHHHHHHHHTTCCSTTCEEEETTTTCCB-CTTSCSS--CCTTEEEEEEC
T ss_pred             eEEccCCCCceEeEE---cCCHHHHHHHHHHHhCCCCcCcEEEEeCCCcEe-cHHHHhc--CCCCCEEEEEC
Confidence            444444455555553   3479999999999999986555543 3 68888 4566655  57788888876


No 80 
>d1d4ba_ d.15.2.1 (A:) Cell death-inducing effector B (CIDE-B), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.70  E-value=54  Score=24.62  Aligned_cols=65  Identities=14%  Similarity=0.246  Sum_probs=46.2

Q ss_pred             EEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEE--cCeecCCchhhhhcCCCCCCEEEEEee
Q 022980           57 IRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLF--RGKEKEDNEHLDVSGMKDKSKVLLLEE  127 (289)
Q Consensus        57 I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiy--kGK~ldd~~~L~~~GVKdgskL~Lv~~  127 (289)
                      .+|.-.+...++-|  -+ .++.||+.+.++.++|+. .-+|+.  .|.+.|+.+++..  +.++..+|++..
T Consensus        38 fKV~~~~Rs~rkGV--~A-~SL~EL~~K~~~~L~i~~-~~~lvLeeDGT~Vd~EeYFqt--L~~nT~lmvL~~  104 (122)
T d1d4ba_          38 FRVCDHKRTIRKGL--TA-ATRQELLAKALETLLLNG-VLTLVLEEDGTAVDSEDFFQL--LEDDTCLMVLQS  104 (122)
T ss_dssp             EEEECSSSSCEEEE--EE-CCSSTHHHHHHHHHSCCS-SCEEEETTTTEEECSTHHHHH--SSSCCCCCEECS
T ss_pred             eEEecCCCCeeeeE--Ec-CCHHHHHHHHHHHhCCCC-CeEEEEeCCCCEECchhHhhc--cCCCCEEEEECC
Confidence            44443334445544  33 469999999999999974 355554  6888999999887  577888888863


No 81 
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=24.21  E-value=42  Score=28.62  Aligned_cols=54  Identities=13%  Similarity=0.172  Sum_probs=41.1

Q ss_pred             EEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCeec-----CC-----chhhhhcCCCCCCEEEEEe
Q 022980           70 VHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKEK-----ED-----NEHLDVSGMKDKSKVLLLE  126 (289)
Q Consensus        70 V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~l-----dd-----~~~L~~~GVKdgskL~Lv~  126 (289)
                      -++|.+.|+.+|=++.++.   .|++.=|+|.|+.+     ..     ...|.++||+.|+.|.++.
T Consensus        17 ~~~~~~~tl~~l~~~~a~~---~Pd~~Al~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~Vai~~   80 (514)
T d1amua_          17 AEYPRDKTIHQLFEEQVSK---RPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMM   80 (514)
T ss_dssp             CCCCTTCCHHHHHHHHHHH---CTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred             CCCCCCCcHHHHHHHHHHh---CCCCeEEEECCeeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEe
Confidence            3567788999988777776   48888888988652     21     3358889999999998886


No 82 
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=21.66  E-value=60  Score=22.43  Aligned_cols=39  Identities=13%  Similarity=0.224  Sum_probs=33.1

Q ss_pred             CeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEE-EcCe
Q 022980           65 PSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVL-FRGK  103 (289)
Q Consensus        65 ~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLi-ykGK  103 (289)
                      ..+|.+.|+..+|=.++|+.++..+|+.+...+.+ ..|+
T Consensus        21 ~n~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~   60 (81)
T d1vqos1          21 QNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG   60 (81)
T ss_dssp             SCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTS
T ss_pred             CCEEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCC
Confidence            35899999999999999999999999999877743 4444


No 83 
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=21.41  E-value=27  Score=24.54  Aligned_cols=16  Identities=44%  Similarity=0.657  Sum_probs=10.4

Q ss_pred             HHHHHHHHH---hhcCCCC
Q 022980          198 AELLMKELL---KLDGIEA  213 (289)
Q Consensus       198 sE~LM~~LL---KLD~Ie~  213 (289)
                      .|.||+|+.   .|+.+..
T Consensus        13 peFLMeqME~RE~lee~~~   31 (95)
T d1fpoa2          13 TAFLMEQLELREELDEIEQ   31 (95)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            467777766   6666643


No 84 
>d1rwsa_ d.15.3.2 (A:) Hypothetical protein PF1061 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.30  E-value=6.1  Score=27.26  Aligned_cols=59  Identities=24%  Similarity=0.333  Sum_probs=43.1

Q ss_pred             EEEEEEeCCeEEEEEecCCCcHHHHHHHHHHHhCCCCCCcEEEEcCee-cCCchhhhhcCCCCCCEEEEE
Q 022980           57 IRINVARGPSQYEVHVPARSTFGDLKKAISEKTGLDPQEQKVLFRGKE-KEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        57 I~V~Vk~g~~~~~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiykGK~-ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      |+|+|...+...+|+++...++.|+-+.    .|++-+.--..-+|+. .+|..      |+|||.|.+.
T Consensus         3 vrvkv~~r~~~reiE~~~g~~v~dvL~~----~gl~~e~~vv~~nG~vv~eDe~------v~DGD~vei~   62 (68)
T d1rwsa_           3 IKVKVIGRNIEKEIEWREGMKVRDILRA----VGFNTESAIAKVNGKVVLEDDE------VKDGDFVEVI   62 (68)
T ss_dssp             CCCBSTTCCCCCCCCCCSSCCHHHHHHT----TTCSSCSSCEEETTEEECSSSC------CCSSCCCBCS
T ss_pred             EEEEEecCCceeEEEecCCcCHHHHHHH----cCCCcceEEEEECCEEecCCcc------cCCCCEEEEE
Confidence            4455555555678999999999987544    6899888888889998 55533      6888876543


No 85 
>d2hj1a1 d.15.3.4 (A:11-87) Hypothetical protein HI0395 {Haemophilus influenzae [TaxId: 727]}
Probab=20.36  E-value=1.2e+02  Score=20.53  Aligned_cols=64  Identities=16%  Similarity=0.203  Sum_probs=40.7

Q ss_pred             cEEEEEEe--CCe--EEEEEecCCCcHHHHHHH---HHHHhCCCCCCcEE-EEcCeecCCchhhhhcCCCCCCEEEEE
Q 022980           56 VIRINVAR--GPS--QYEVHVPARSTFGDLKKA---ISEKTGLDPQEQKV-LFRGKEKEDNEHLDVSGMKDKSKVLLL  125 (289)
Q Consensus        56 ~I~V~Vk~--g~~--~~~V~V~a~sTvgdLK~~---I~e~TGvpp~~QKL-iykGK~ldd~~~L~~~GVKdgskL~Lv  125 (289)
                      .|+|.|.|  ..+  ...++||..+|+.+--..   +....++.....++ || ||....     ++-+++||+|-+-
T Consensus         2 ~i~VeVvYA~p~~q~~~~l~v~~GtTv~~Ai~~Sgi~~~fpeidl~~~~vGIf-Gk~v~~-----~~~L~~gDRVEIY   73 (77)
T d2hj1a1           2 QINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIF-SRPIKL-----TDVLKEGDRIEIY   73 (77)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEETTCBHHHHHHHHTHHHHCTTCCTTTSEEEEE-ECSCCT-----TCBCCTTCEEEEC
T ss_pred             eeEEEEEEECCCeeEEEEEECCCCCcHHHHHHHcCcHhhCcccccccccEeEE-CcCcCC-----CCcCCCCCEEEEe
Confidence            47788877  222  247899999999874332   33344566667777 55 555332     2357999998654


No 86 
>d1nzea_ a.24.18.1 (A:) Oxygen-evolving enhancer protein 3, {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=20.25  E-value=83  Score=22.70  Aligned_cols=68  Identities=15%  Similarity=0.116  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhhhhHHHHHHHHHhhcCCCCch---hHHHHHHHHHHHHHHHHH
Q 022980          163 AGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMKELLKLDGIEAEG---EAKVQRKTEVRRVQKFHE  233 (289)
Q Consensus       163 ~~i~~evd~La~~v~~~e~~~~~g~k~~eke~~~LsE~LM~~LLKLD~Ie~eG---daR~~RK~~VkrVQ~~Le  233 (289)
                      ..++..+..|...+..+..   .-++...++.+.|+-.|.+.|.+||-=....   .+.......|.-++.+|.
T Consensus        39 ~~Lr~~~~~Lr~dl~~li~---~~~~~~k~~~~~la~~lf~~le~LD~Aar~kd~~~a~~~Y~~t~~~ld~~la  109 (112)
T d1nzea_          39 NDLRLRASYLRYDLKTVIS---AKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLA  109 (112)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---TSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCHhhhHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence            3344455555555555533   3344456789999999999999999764333   455555555555555554


No 87 
>d3d32a1 d.15.1.3 (A:1-118) GABA(A) receptor associated protein GABARAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.13  E-value=54  Score=24.16  Aligned_cols=46  Identities=15%  Similarity=0.215  Sum_probs=34.5

Q ss_pred             EEEecCCCcHHHHHHHHHHHhCCCCCCcEEEE-cCeecCCchhhhhc
Q 022980           69 EVHVPARSTFGDLKKAISEKTGLDPQEQKVLF-RGKEKEDNEHLDVS  114 (289)
Q Consensus        69 ~V~V~a~sTvgdLK~~I~e~TGvpp~~QKLiy-kGK~ldd~~~L~~~  114 (289)
                      -+-||.+.||+++...|....++.++.--.+| +|.....+.+|.++
T Consensus        50 KflVp~d~tv~qf~~~iRkrl~l~~~~alflfvn~~~~~~~~ti~~l   96 (118)
T d3d32a1          50 KYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQL   96 (118)
T ss_dssp             EEEEETTCBHHHHHHHHHHHHTCCTTSCCEEEBTTBCCCTTCBHHHH
T ss_pred             eEEecCCccHHHHHHHHHHHhCCCccceEEEEECCcccCccccHHHH
Confidence            35678999999999999999999998655455 55445566666554


No 88 
>d1udxa3 d.242.1.1 (A:341-416) Obg GTP-binding protein C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=20.12  E-value=25  Score=24.11  Aligned_cols=17  Identities=18%  Similarity=0.313  Sum_probs=14.6

Q ss_pred             chhhhhcCCCCCCEEEE
Q 022980          108 NEHLDVSGMKDKSKVLL  124 (289)
Q Consensus       108 ~~~L~~~GVKdgskL~L  124 (289)
                      ...|...|+++||+|.+
T Consensus        49 ~~~L~~~Gak~GD~V~I   65 (76)
T d1udxa3          49 EAALRAKGVRAGDLVRI   65 (76)
T ss_dssp             HHHHHTTTCCTTCEEEE
T ss_pred             HHHHHHcCCCCCCEEEE
Confidence            46799999999999874


Done!