BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022981
(289 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 224/295 (75%), Positives = 234/295 (79%), Gaps = 37/295 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE+EVEDLFYKYGRILDIELKIPPRPPCYCFVEFEN RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRG SSSDRRGGYGG G GG+G G IS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGQSSSDRRGGYGGSGGGGSGSGGRYC------IS 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+
Sbjct: 113 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSD------------------- 153
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GT+G+VDYTN EDMKYAIRKLDDTEFRNPWAR I VK Y+ SPSRSRSRSRSRSRS
Sbjct: 154 GTFGIVDYTNYEDMKYAIRKLDDTEFRNPWARAYIRVKMYENSPSRSRSRSRSRSRSPR- 212
Query: 241 IVRRNRSKSLERSVSRSVSRSMSASPVK------SSRARSRSRSVSPDKVRSGSG 289
RNRSKSLERS SRSVS+S SASPVK SR+RSRS S SP+K SGSG
Sbjct: 213 ---RNRSKSLERSPSRSVSKSRSASPVKSSRAKSGSRSRSRSVSGSPNKAPSGSG 264
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/260 (73%), Positives = 202/260 (77%), Gaps = 35/260 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIREYE+EDLFYKYGRILD+ELKIPPRPPCYCFVEFEN+RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG G+ SS G G GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSD-------------RRGGHGSGGGGRFGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD++
Sbjct: 108 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDAD------------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GT+G+VDYTN EDMKYAIRKLDDTEFRNPWAR I VKRYD RSRSRS S SRSR
Sbjct: 149 GTFGLVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKRYD---VSPRSRSRSHSPSRSR 205
Query: 241 IVRRNRSKSLERSVSRSVSR 260
++RNRSKSLERSVSRS S+
Sbjct: 206 SLKRNRSKSLERSVSRSASK 225
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/288 (69%), Positives = 224/288 (77%), Gaps = 43/288 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+EDLFYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYNFDGCRLRVELAHG GRG SSSDRRGGYGGGG GG GG G G G+ RFG+S
Sbjct: 61 AIKGRDGYNFDGCRLRVELAHG--GRGQSSSDRRGGYGGGGGGGYGGGGGGGGSARFGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSD------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD------------------- 221
GTYGVVDYTN +DMKYAIRKLDDTEFRNPWARG I VK+Y+
Sbjct: 160 GTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSR 219
Query: 222 ---RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASP 266
RS R RSRSRSRS SRS+ R++ SKS +RS+SRS+S+S S SP
Sbjct: 220 SRSRSRGRGRSRSRSRSLSRSKSPRKDLSKSPKRSLSRSISKSRSPSP 267
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 186/221 (84%), Gaps = 21/221 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLP+DIRE E+EDLFYKYGRI++IELK+PPRPPCYCFVEF+NARDAED
Sbjct: 108 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 167
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSSSDRRG GGGG GG GG G AG GRFG+S
Sbjct: 168 AIRGRDGYNFDGCRLRVELAHG--GRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVS 225
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE
Sbjct: 226 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE------------------- 266
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT+G+VDYTN +DMKYAIRKLDDTEFRNPWAR I V++Y+
Sbjct: 267 GTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 307
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 221/288 (76%), Gaps = 42/288 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHG GRG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHG--GRGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSD------------------- 158
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD------------------- 221
GTYGVVDYTN +DMKYAIRKLDDTEFRNPWARG I VK+Y+
Sbjct: 159 GTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSR 218
Query: 222 -RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVK 268
RS R RS SRSRS SRS+ R++ SKS RS+SRS+S+S S SP K
Sbjct: 219 SRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSPSPDK 266
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 221/288 (76%), Gaps = 42/288 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHG GRG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHG--GRGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSD------------------- 158
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD------------------- 221
GTYGVVDYTN +DMKYAIRKLDDTEFRNPWARG I VK+Y+
Sbjct: 159 GTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSR 218
Query: 222 -RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVK 268
RS R RS SRSRS SRS+ R++ SKS RS+SRS+S+S S SP K
Sbjct: 219 SRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSPSPDK 266
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/288 (68%), Positives = 221/288 (76%), Gaps = 42/288 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHG GRG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHG--GRGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSD------------------- 158
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD------------------- 221
GTYGVVDYTN +DMKYAIRKLDDTEFRNPWARG I VK+Y+
Sbjct: 159 GTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSR 218
Query: 222 -RSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVK 268
RS R RS SRSRS SRS+ R++ SKS RS+SRS+S+S S SP K
Sbjct: 219 SRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSPSPDK 266
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 182/221 (82%), Gaps = 22/221 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSSSDRRG GGGG GG GG G GIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRF-GIS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE------------------- 158
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT+G+VDYTN +DMKYAIRKLDDTEFRNPWAR I V++Y+
Sbjct: 159 GTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYE 199
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/268 (75%), Positives = 216/268 (80%), Gaps = 28/268 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSSSD G GG GAG GRFGIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGPSSSD-------RRGYGGGGGNGGAGGGRFGIS 111
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE
Sbjct: 112 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE------------------- 152
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GT+G+VDYTN +DMKYAIRKLDD EFRNPWAR I V++Y+ S SRSRSRS SRS SRSR
Sbjct: 153 GTFGIVDYTNYDDMKYAIRKLDDAEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSR 212
Query: 241 IVRRNRSKSLERSVSRSVSRSMSASPVK 268
+R RS+SLERSVS+S SRS SASP+K
Sbjct: 213 SPKRVRSRSLERSVSKSRSRSQSASPIK 240
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 186/221 (84%), Gaps = 21/221 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLP+DIRE E+EDLFYKYGRI++IELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSSSDRRG GGGG GG GG G AG GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT+G+VDYTN +DMKYAIRKLDDTEFRNPWAR I V++Y+
Sbjct: 160 GTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 186/221 (84%), Gaps = 21/221 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLP+DIRE E+EDLFYKYGRI++IELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSSSDRRG GGGG GG GG G AG GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE
Sbjct: 119 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT+G+VDYTN +DMKYAIRKLDDTEFRNPWAR I V++Y+
Sbjct: 160 GTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 176/221 (79%), Gaps = 31/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLP+DIRE E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFENARDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSS+D G G G GRFGIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGPSSND----------RRGGYGGGGGSGGRFGIS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS+
Sbjct: 109 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSD------------------- 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT+GVVDYTN EDMKYAIRKLDDTEFRNPWAR I VK+++
Sbjct: 150 GTFGVVDYTNHEDMKYAIRKLDDTEFRNPWARAYIRVKQHE 190
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/222 (77%), Positives = 183/222 (82%), Gaps = 22/222 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLP+DIRE +VEDLFYKYGRILD+ELKIPPRPPCYCFVEFENARDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRR-GGYGGGGAGGAGGAGAGAGAGRFGI 119
AIRGRDGYNFDG RLRVELAHG GRGPSS+DRR G GGGG GG GG G G G GR GI
Sbjct: 61 AIRGRDGYNFDGSRLRVELAHG--GRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGI 118
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
SRHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RD +
Sbjct: 119 SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGD------------------ 160
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN EDMKYAIRKLDDTEF+NPWAR I VK+Y+
Sbjct: 161 -GTLGLVDYTNHEDMKYAIRKLDDTEFKNPWARAYIRVKQYE 201
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 179/221 (80%), Gaps = 28/221 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF+NARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHG GRGPSSSDRR G GG GAG GRFGIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHG--GRGPSSSDRR-------GYGGGGGNGGAGGGRFGIS 111
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE
Sbjct: 112 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSE------------------- 152
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAIRKLDDTEFRNPWA I V++Y+
Sbjct: 153 GTLGIVDYTNYDDMKYAIRKLDDTEFRNPWAIAYIRVRKYE 193
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 189/269 (70%), Gaps = 33/269 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP+DI+E EVEDLFYKYGRILDIELKIPPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RGPSSS G G G GR GIS
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGG--RGPSSS------SDRRGSYGSSGGGGGGGGRHGIS 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHS+YRVI+RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG
Sbjct: 113 RHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG------------------ 154
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
T+G+VDYTN EDMKYAIRKLDDTEFRNPW R I V+ Y +
Sbjct: 155 -TFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREY-----KGSPSRSRSRSRSRS 208
Query: 241 IVRRNRSKSLERSVSRS-VSRSMSASPVK 268
R +S RSVSRS +S SASPVK
Sbjct: 209 RTPRKSRRSPARSVSRSPPPKSRSASPVK 237
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/201 (75%), Positives = 168/201 (83%), Gaps = 22/201 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSR+IYVGNLP DIRE+E+ED+FYKYGRI+DIELK+PPRPPCYCFVEFE++RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYN DGCRLRVELAHG GRG SSSDRRGGYGGGG+G GG G G A RFG+S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHG--GRGQSSSDRRGGYGGGGSGYGGGGGGGGSA-RFGVS 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSE+RVIVRGLPSSASWQDLKDHMRKAGDVCFAEV+RDS+
Sbjct: 118 RHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSD------------------- 158
Query: 181 GTYGVVDYTNPEDMKYAIRKL 201
GTYGVVDYTN +DMKYA+R L
Sbjct: 159 GTYGVVDYTNYDDMKYAVRNL 179
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 163/251 (64%), Positives = 178/251 (70%), Gaps = 42/251 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLPSDI+EYE+EDLFYKYGRILDIELKIPPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIR RDGYNFDGCRLRVELAHGG RGPSSSDRR YG G G G F +
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGG--RGPSSSDRRSSYG---------GGGGGGGQGFLLL 109
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ + ++ +DHMRKAGDVCFAEVSRDSEG
Sbjct: 110 DYVDMMNLLEXC--------FQDHMRKAGDVCFAEVSRDSEG------------------ 143
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
T+G+VDYTN +DMKYAIRKLDDTEFRNPWAR I VK+YD SP+RSRSRS RSR+
Sbjct: 144 -TFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPTRSRSRSXERSRT--- 199
Query: 241 IVRRNRSKSLE 251
RRNRSKS E
Sbjct: 200 -ARRNRSKSAE 209
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/269 (65%), Positives = 188/269 (69%), Gaps = 48/269 (17%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGRFSRTIYVGNLPSDIREYE+EDLFYKYGRILD+ELKIPPRPPCYCFVEFEN+RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG G+ SS G G GRFG+S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSD-------------RRGGHGSGGGGRFGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYR G + DHMRKAGDVCFAEVSRD++G
Sbjct: 108 RHSEYR----GAYEIGRYCWNLDHMRKAGDVCFAEVSRDADG------------------ 145
Query: 181 GTYGVVDYTNPEDMKYA---------IRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
T+G+VDYTN EDMKYA IRKLDDTEFRNPWAR I VKRYD RSRS
Sbjct: 146 -TFGLVDYTNHEDMKYAQLTCSSLSQIRKLDDTEFRNPWARAYIRVKRYD---VSPRSRS 201
Query: 232 RSRSRSRSRIVRRNRSKSLERSVSRSVSR 260
RS S SRSR ++RNRSKSLERSVSRS S+
Sbjct: 202 RSHSPSRSRSLKRNRSKSLERSVSRSASK 230
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/220 (65%), Positives = 163/220 (74%), Gaps = 32/220 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G+ S++DR Y AGG G G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGQS-STNDRYSSY--SSAGGRSG----------GVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RDS S
Sbjct: 108 RRSEYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDS-------------------S 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAIRKLDD+EFRN ++RG I VK Y
Sbjct: 149 GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEY 188
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/232 (63%), Positives = 171/232 (73%), Gaps = 21/232 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP D+RE E+EDLFYKYGRI+DI+LK+PPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVE+AHGG G P+S DR Y GG G GG+ + G G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPASVDRYSIYSSGGGRGGGGSASENGGRAGGVS 120
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV V GLPSSASWQDLKDHMR+AGDVCFA+V RD +
Sbjct: 121 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGS------------------A 162
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSR 232
GT G+VD+TN +DMKYAIRKLDD+EFRNP++R I V ++SRSRSR
Sbjct: 163 GTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRVC---LCVTKSRSRSR 211
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 158/217 (72%), Gaps = 35/217 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP D+RE E+ED+FYKYGRI+DI+LK+PPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVE+AHGG G P + DR GG AG G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRG-PPPAVDRSAAESGGRAG--------------GVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCFA+V RD +
Sbjct: 106 RRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFAQVFRD--------------------A 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
GT G+VD+TN +DMKYAIRKLDD+EFRNP++R I V
Sbjct: 146 GTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 182
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 160/220 (72%), Gaps = 29/220 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R +RT+YVGNLP D+RE E+EDLFYKYGRI+D++LK+PPRPP YCF+EFE+ARDAED
Sbjct: 1 MSSRMTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG R+RVE AHGG R SS R Y + AG GR G++
Sbjct: 61 AIRGRDGYNFDGHRIRVEFAHGGR-RTSSSLGRPSSY---------SSIAGGRGGRGGVT 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH++YRV+V GLPSSASWQDLKDHMR+AGDVC+AEV RDS +
Sbjct: 111 RHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCYAEVFRDS-------------------N 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G VDYTN EDMKYAIRKLDD+EFRN ++R I VK Y
Sbjct: 152 GTRGTVDYTNLEDMKYAIRKLDDSEFRNAFSRSYIQVKEY 191
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 158/221 (71%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G SS DR + G GR G+S
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNF--------------GGGGRRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 107 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDD+EFRN +++G I VK YD
Sbjct: 148 GTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYD 188
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 161/217 (74%), Gaps = 20/217 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP D+RE E+EDLFYKYGRI+DI+LK+PPRPP YCF+EFE+ RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVE+AHGG G P + DR Y GG GG G A A G G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRG-PPPAVDRYSIYSSGGRGGGGSA-ADCGGRAGGVS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV V GLPSSASWQDLKDHMR+AGDVCFA+V RD S
Sbjct: 119 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGT------------------S 160
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
GT G+VD+TN +DMKYAIRKLDD+EFRNP++R I V
Sbjct: 161 GTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 197
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 156/215 (72%), Gaps = 36/215 (16%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLF+KYG I+DI+LK+PPRPP YCF+EFE+ RDAEDAIR
Sbjct: 3 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGYNFDG RLRVE+AHG GRGP SSDR YGG G +SR S
Sbjct: 63 GRDGYNFDGYRLRVEIAHG--GRGPPSSDRYSSYGGRGG---------------SVSRRS 105
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
EYRVI+ GLPSSASWQDLKDHMR+AGDVCFA+V R+ +GT
Sbjct: 106 EYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREG-------------------NGTT 146
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
G+VD+TN +DMKYAI+KLDD+EFRNP++R I VK
Sbjct: 147 GIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVK 181
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 158/221 (71%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G SS DR + G GR G+S
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNF--------------GGGGRRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 107 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDD+EFRN +++G I VK YD
Sbjct: 148 GTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYD 188
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 162/221 (73%), Gaps = 27/221 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G S DR +GGGG GG GG +S
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSSSFGGGGGGGGGGRRG--------VS 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH++YRV+V GLPSSASWQDLKDHMR+AGDVCF+EV R+ S
Sbjct: 113 RHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREG-------------------S 153
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDDTEF+N +++G I VK YD
Sbjct: 154 GTTGIVDYTNYDDMKYAIKKLDDTEFKNAFSKGYIRVKEYD 194
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 156/215 (72%), Gaps = 36/215 (16%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLF+KYG I+DI+LK+PPRPP YCF+EFE+ RDAEDAIR
Sbjct: 1 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGYNFDG RLRVE+AHG GRGP SSDR YGG G +SR S
Sbjct: 61 GRDGYNFDGYRLRVEIAHG--GRGPPSSDRYSSYGGRGG---------------SVSRRS 103
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
EYRVI+ GLPSSASWQDLKDHMR+AGDVCFA+V R+ +GT
Sbjct: 104 EYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREG-------------------NGTT 144
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
G+VD+TN +DMKYAI+KLDD+EFRNP++R I VK
Sbjct: 145 GIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVK 179
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 158/221 (71%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G SS DR + G GR G+S
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNF--------------GGGGRRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 107 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDD+EFRN +++G I VK YD
Sbjct: 148 GTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYD 188
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 157/221 (71%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 169
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+
Sbjct: 170 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREG-------------------G 210
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAIRKLDD+EF+N +++ I VK YD
Sbjct: 211 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 251
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 157/221 (71%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+
Sbjct: 104 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREG-------------------G 144
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAIRKLDD+EF+N +++ I VK YD
Sbjct: 145 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 185
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/237 (59%), Positives = 159/237 (67%), Gaps = 35/237 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY FDGCRLRVE AHGG G SS DR + +G+ R G+
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHS-SSVDRY---------------SRSGSSRGGVP 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R ++YRV+V GLPSSASWQDLKDHMR+AGDVCF+EV RD G
Sbjct: 105 RRTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMA---------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
G+VDYTN +DMKYAIRKLDD+EFRN ++R + VK YD S SRS S RS
Sbjct: 149 ---GIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRS 202
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 157/221 (71%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 169
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+
Sbjct: 170 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREG-------------------G 210
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAIRKLDD+EF+N +++ I VK YD
Sbjct: 211 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 251
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 157/221 (71%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDVC++EV R+
Sbjct: 104 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREG-------------------G 144
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAIRKLDD+EF+N +++ I VK YD
Sbjct: 145 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 185
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 154/220 (70%), Gaps = 35/220 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYNFDG RLRVELAHGG S + G G R G+S
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN----------------SHGGGGRRGGVS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 105 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAIRKLDDTEF+N ++R I VK Y
Sbjct: 146 GTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 159/220 (72%), Gaps = 31/220 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHG GR SSS + G G G G R G+S
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHG--GRANSSS----------LPNSYGGGGGGGGRRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ +
Sbjct: 109 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGD------------------- 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAIRKLDD+EFRN ++R I VK Y
Sbjct: 150 GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAPIRVKEY 189
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 156/220 (70%), Gaps = 35/220 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG +SS YGGGG G +S
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRA---NSSSLPNSYGGGGRRGG-------------VS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 105 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAIRKLDDTEF+N ++R I VK Y
Sbjct: 146 GTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/221 (61%), Positives = 153/221 (69%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 190 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 249
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRD YNFDG RLRVELAHGG G+ S DR Y G G G+S
Sbjct: 250 AICGRDRYNFDGYRLRVELAHGGRGQS-YSYDRPRSYSSGRRG--------------GVS 294
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 295 RRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 335
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYT EDMKYAIRKLDD+EFRN ++R I V+ YD
Sbjct: 336 ATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVREYD 376
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 154/220 (70%), Gaps = 35/220 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI++I+LK+PPRPP + FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGYNFDG RLRVELAHGG S + G G R G+S
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPN----------------SHGGGGRRGGVS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 105 RHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYRE-------------------VV 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAIRKLDDTEF+N ++R I VK Y
Sbjct: 146 GTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 159/221 (71%), Gaps = 31/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ARDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHG GRG +SS + G G G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHG--GRGNTSS----------YDRSSGFGGGGGGARRGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 109 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDDTEFRN + R I VK YD
Sbjct: 150 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYD 190
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 159/221 (71%), Gaps = 31/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ARDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHG GRG +SS + G G G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHG--GRGNTSS----------YDRSSGFGGGGGGARRGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 109 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDDTEFRN + R I VK YD
Sbjct: 150 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYD 190
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 180/302 (59%), Gaps = 73/302 (24%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +R +YVGNLP D RE ++ED+F+KYG ++ I+LK PPRPP YCF+EFENARDAED
Sbjct: 1 MGSRSNRILYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+ DG RLRVELAHGG RG S DR + GG G GR +
Sbjct: 61 AIRGRDGYDIDGHRLRVELAHGG--RGALSVDRYSSFSSGG---------GRRNGR--LQ 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
H +YRV + GLPSSASWQDLKDHMR+AGDV FA+V RDS +
Sbjct: 108 SHCDYRVTISGLPSSASWQDLKDHMRRAGDVTFAQVFRDS-------------------N 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY-------------------- 220
GT GVVDYTN +DMKYAIRKLDDTEF+NP++R I VK Y
Sbjct: 149 GTTGVVDYTNYDDMKYAIRKLDDTEFKNPFSRSYIRVKEYGSKGSMSRSRSRSFSRSRSR 208
Query: 221 ------------------DRSPSRSRSRSRS---RSRSRSRIVRRNRSKSLERSVSRSVS 259
RSP+ SR + S RSRSRS ++R RSK + R+ SRS S
Sbjct: 209 SRSRSRSRSHSHSRTRSPSRSPNVSRRKVHSKPLRSRSRSGSMQRPRSKPVPRTKSRSRS 268
Query: 260 RS 261
R+
Sbjct: 269 RT 270
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 171/255 (67%), Gaps = 48/255 (18%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-------------RSPSRS 227
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD R+PS S
Sbjct: 150 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYDARSRSRSRSHSYSRTPSYS 209
Query: 228 RSRS-RSRSRSRSRI 241
RSRS +S S+S S +
Sbjct: 210 RSRSPKSVSQSPSSV 224
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/221 (62%), Positives = 154/221 (69%), Gaps = 32/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G SS D G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNA-SSHD------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDDTEFRN + R I VK Y+
Sbjct: 149 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYN 189
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/287 (50%), Positives = 171/287 (59%), Gaps = 40/287 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + R G+S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVD---------------HYSSYSSSSRGGLS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V R
Sbjct: 106 RHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGR-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
G G+VDYTN +DMKYAIRKLDD+ F+N ++R I V+ Y+
Sbjct: 147 GMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYEPRSFSRSPSRSPSVSRSRS 206
Query: 241 IVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVSPDKVRSG 287
R S RS+SRS+ SS+ARSR D++ G
Sbjct: 207 PRRSRSYSYSNHSSGRSLSRSV------SSQARSRGVLTGADQLTRG 247
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/221 (62%), Positives = 154/221 (69%), Gaps = 32/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G SS D G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNA-SSHD------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDDTEFRN + R I VK Y+
Sbjct: 149 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYN 189
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 150 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 190
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 150 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 190
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 181/270 (67%), Gaps = 37/270 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHG GRGPSS + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHG--GRGPSSF--------------DRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS--RSRSRSR 238
T G+ DYTN EDMK+AIRKLDD+EFRN ++R I V+ YD SRS+S+S ++RS SR
Sbjct: 146 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYDARRSRSQSKSPVKARSPSR 205
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVK 268
S V R KS+ RS +RS S S SP K
Sbjct: 206 SPPVSPPRDKSISRSPARSKSLPRSCSPAK 235
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 150 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 190
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 147 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 187
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 168/276 (60%), Gaps = 40/276 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + R G+S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVD---------------HYSSYSSSSRGGLS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V R
Sbjct: 106 RHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGR-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
G G+VDYTN +DMKYAIRKLDD+ F+N ++R I V+ Y+
Sbjct: 147 GMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYEPRSFSRSPSRSPSVSRSRS 206
Query: 241 IVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRS 276
R S RS+SRS+ SS+ARSRS
Sbjct: 207 PRRSRSYSYSNHSSGRSLSRSV------SSQARSRS 236
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 160/240 (66%), Gaps = 34/240 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG + I+LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G S + G GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDR---------------HSSYSGGRGRGGAS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD S
Sbjct: 106 RRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDG-------------------S 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GT G+VDYTN EDMKYAI+K+DD+EFRN +++ + V+ YD SRS R RS SR R
Sbjct: 147 GTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQAYVRVREYDSKRDSSRSPGRDRSHSRGR 206
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 109 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 150 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 190
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 152/221 (68%), Gaps = 32/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G S G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHD-------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREG-------------------G 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAI+KLDDTEFRN + R I VK Y+
Sbjct: 149 GTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYN 189
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 147 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 187
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSACRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 147 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 187
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/229 (60%), Positives = 159/229 (69%), Gaps = 33/229 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYGRI I+LK+PPRPP Y FVEFE+A DA+D
Sbjct: 1 MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHG GRG SSS+ R GG GG G +
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHG--GRGHSSSNDRYSSHGGSRGGRGVSRR---------- 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
S+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD S
Sbjct: 109 --SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDG-------------------S 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRS 229
GT G+VDYTN +DMKYAI+KLDD+EFRN ++R + V+ YD SRS
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYDSKRDLSRS 196
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 156/221 (70%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 24 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 83
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR+GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 84 AIYGRNGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 126
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+
Sbjct: 127 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREG-------------------G 167
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN EDMK AIRKLDD+EFRN ++R I V+ YD
Sbjct: 168 ATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYD 208
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 155/221 (70%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREG-------------------G 144
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN EDMK AIRKLDD+EFRN ++R I V+ YD
Sbjct: 145 ATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYD 185
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 155/221 (70%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREG-------------------G 144
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN EDMK AIRKLDD+EFRN ++R I V+ YD
Sbjct: 145 ATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYD 185
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 151/221 (68%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + R G+S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVD---------------HYSSYSSSSRGGLS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RHSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V R
Sbjct: 106 RHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGR-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
G G+VDYTN +DMKYAIRKLDD+ F+N ++R I V+ Y+
Sbjct: 147 GMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 160/221 (72%), Gaps = 26/221 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE VEDLFYKYGRI+DI+LK+PPRPP Y FVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A GRDGYNFDG RLRVE AHGG G G S DR GG GAG G+GR G+S
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRS-------GSFGGGGGAGGGSGRRGVS 113
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH++YRV+V GLPSSASWQDLKDHMR+AGDVCF+EV R+
Sbjct: 114 RHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREG-------------------G 154
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+ DYTN +DMKYAI+KLDDTEF+N +++G I VK YD
Sbjct: 155 GTIGIADYTNYDDMKYAIKKLDDTEFKNAFSKGYIRVKEYD 195
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 153/237 (64%), Gaps = 42/237 (17%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY FDGCRLRVE AHGG G SS DR R G S
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHS-SSVDR--------------------YSRSGSS 99
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R ++ V+V GLPSSASWQDLKDHMR+AGDVCF+EV RD G
Sbjct: 100 R--DFAVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMA---------------- 141
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
G+VDYTN +DMKYAIRKLDD+EFRN ++R + VK YD S SRS S RS
Sbjct: 142 ---GIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRS 195
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 155/221 (70%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSARRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLDD++FRN ++R I V+ YD
Sbjct: 147 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAYIRVREYD 187
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 151/221 (68%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R S TIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG + S DR + G G G+S
Sbjct: 61 AIYGRDGYDFDGYRLRVELAHGGKAQS-YSYDRPSSFSSGRRG--------------GVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSEYRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYTN +DMKYAIRKLD TEFRN ++R I V+ YD
Sbjct: 147 ATVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRAYIRVREYD 187
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/222 (60%), Positives = 152/222 (68%), Gaps = 35/222 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVEDLFYK+G I+DIELKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSRRSSRTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIR RDGY FDG RLRVELAHG GRG SSS + +G G+S
Sbjct: 61 AIRYRDGYKFDGFRLRVELAHG--GRGYSSS--------------VDRYSSYSSGSRGVS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+HSEYRV+V GLP SASWQDLKDHMR+AGDVCF++V RD
Sbjct: 105 KHSEYRVLVTGLPPSASWQDLKDHMRRAGDVCFSQVFRDR-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 222
G G+V+YTN EDMKYAIRKLDD+EFRN ++ I V+ YDR
Sbjct: 146 GMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYDR 187
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 143/265 (53%), Positives = 163/265 (61%), Gaps = 40/265 (15%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
TIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+DAI GRDG
Sbjct: 8 TIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDG 67
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
YNFDG RLRVELAHGG G+ +R Y G G G+SR SEYRV
Sbjct: 68 YNFDGYRLRVELAHGGRGQS-YQYERPRSYSSGRRG--------------GVSRRSEYRV 112
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+V GLPSSASWQDLKDHMR+AGDVCF++V R++ G+VD
Sbjct: 113 LVDGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------GAIVGIVD 153
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD------RSPSRSRSRSRSRSRSRSRI 241
YTN +DMKYAIRKLD TEFRN ++R I V+ YD R
Sbjct: 154 YTNYDDMKYAIRKLDGTEFRNAFSRSYIRVREYDARSRSRSRSLSYSRSRSCSRSESPRS 213
Query: 242 VRRNRSKSLERSVSRSVSRSMSASP 266
V R+ ERS+SRS S SASP
Sbjct: 214 VSRSPLPVDERSLSRSRSPDSSASP 238
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 154/221 (69%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIR+ EV+DLFYKYG I++++LKIPPRPP Y FVEFE+ARDAED
Sbjct: 38 MSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAED 97
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDGCRLRVELAHGG RR + G + +G G S
Sbjct: 98 AIRGRDGYNFDGCRLRVELAHGG---------RR-----HSSPGDRYSSYSGRSGSRGPS 143
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD
Sbjct: 144 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-------------------G 184
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
G G+VDYTN +DMK+AI+KLDD+EFRN ++R + V+ YD
Sbjct: 185 GMTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRSYVRVREYD 225
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 147/220 (66%), Gaps = 33/220 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHS-SSKDRHNSHSNGRGGRGVSRRS---------- 109
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
EYRV+V GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 110 ---EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAI+KLDD+EFRN +++G + V+ Y
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREY 187
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 147/220 (66%), Gaps = 33/220 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHS-SSKDRHNSHSNGRGGRGVSRRS---------- 109
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
EYRV+V GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 110 ---EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAI+KLDD+EFRN +++G + V+ Y
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREY 187
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 150/221 (67%), Gaps = 35/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGR----------------GTSSFDRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R + V+ YD
Sbjct: 146 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYD 186
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 156/282 (55%), Positives = 183/282 (64%), Gaps = 35/282 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHG GRG SSS R G +G G+S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHG--GRGSSSSVDRYSRHSGRSGSR------------GVS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G LT
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGG--------LT-------- 181
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSR 238
G+VDYTN +D+KYAIRKLDD+EFRN ++R I V+ Y S S SR RS SRSR
Sbjct: 182 ---GIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSR 238
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVS 280
S V R+RS SL S S R + VK S+S+++S
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFTLVASVKFDLFVSKSKTLS 280
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 156/282 (55%), Positives = 183/282 (64%), Gaps = 35/282 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHG GRG SSS R G +G G+S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHG--GRGSSSSVDRYSRHSGRSGSR------------GVS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G LT
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGG--------LT-------- 181
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSR 238
G+VDYTN +D+KYAIRKLDD+EFRN ++R I V+ Y S S SR RS SRSR
Sbjct: 182 ---GIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSR 238
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVS 280
S V R+RS SL S S R + VK S+S+++S
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFTLVASVKFDLFVSKSKTLS 280
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 181/282 (64%), Gaps = 35/282 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHG GRG SSS R G +G G+S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHG--GRGSSSSVDRYSRHSGRSGSR------------GVS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLT---------------- 181
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSR 238
G+VDYTN +D+KYAIRKLDD+EFRN ++R I V+ Y S S SR RS SRSR
Sbjct: 182 ---GIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSR 238
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVS 280
S V R+RS SL S S R + VK S+S+++S
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFTLVASVKFDLFVSKSKTLS 280
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 158/231 (68%), Gaps = 24/231 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 160 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/279 (56%), Positives = 181/279 (64%), Gaps = 36/279 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHG GRG SSS R G +G G+S
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHG--GRGSSSSVDRYSRHSGRSGSR------------GVS 137
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G
Sbjct: 138 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLT---------------- 181
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSR 238
G+VDYTN +D+KYAIRKLDD+EFRN ++R I V+ Y S S SR RS SRSR
Sbjct: 182 ---GIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSR 238
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSR 277
S V R+RS SL S S SRS+S S R+ S SR
Sbjct: 239 SPYVSRSRSCSLSHSYS-GRSRSLSPKAKHSRRSFSLSR 276
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 152/221 (68%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHG GRG SSS + + GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHG--GRGHSSS------------IDRHSHSSGRGGRGGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V D
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDG-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMK+AIRKLDD+EFRN ++R + VK YD
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYD 188
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 153/231 (66%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG S Y G A S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSSYTGSRAP----------------S 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S YRV+V GLP SASWQDLKDHMRKAGDVCF+EV RD G S
Sbjct: 105 RRSAYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFRD-RGRMS--------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVVDY+N +DMKYAIRKLDDTEFRN ++R I V+ Y+ SRS SRS
Sbjct: 149 ---GVVDYSNYDDMKYAIRKLDDTEFRNAFSRAYIRVREYE---SRSVSRS 193
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 184/286 (64%), Gaps = 42/286 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG G SS DR + G +G G+S
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRG-SSSSVDRYSRHSG-------------RSGSRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLT---------------- 150
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSR 238
G+VDYTN +D+KYAIRKLDD+EFRN ++R I V+ Y S S SR RS SRSR
Sbjct: 151 ---GIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSR 207
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSRSVSPDKV 284
S V R+RS SL S S RS S SP +A+ RS+ P K+
Sbjct: 208 SPYVSRSRSCSLSHSYS---GRSRSLSP----KAKHSRRSLFPFKM 246
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 158/231 (68%), Gaps = 24/231 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 160 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 150/221 (67%), Gaps = 34/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG +LRVELAHGG G S + G G+S
Sbjct: 61 AIRGRDGYDFDGHQLRVELAHGGRGHSSSDR---------------HSSHSGGGRGRGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD S
Sbjct: 106 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDG-------------------S 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN EDMK+AI+KLDD+EFRN ++R + VK YD
Sbjct: 147 GTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSRAYVRVKEYD 187
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 150/221 (67%), Gaps = 35/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDR----------------SSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R + V+ YD
Sbjct: 146 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYD 186
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 157/231 (67%), Gaps = 28/231 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 115 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 155
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 156 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 158/231 (68%), Gaps = 24/231 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 160 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 149/231 (64%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 135
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 136 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 173
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSR 226
GT G+VDYTN +DMKYAI+KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 174 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 224
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/279 (55%), Positives = 181/279 (64%), Gaps = 36/279 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPP+PP Y FVEFE+ARDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RL VELAHGG G SS DR + G +G G+S
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRG-SSSSVDRYSRHSG-------------RSGSRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAG VCF++V R+ G
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGLT---------------- 150
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY--DRSPSRSRSRSRSRSRSR 238
G+VDYTN +D+KYAIRKLDD+EFRN ++R I V+ Y S S SR RS SRSR
Sbjct: 151 ---GIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRRSYSRSR 207
Query: 239 SRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARSRSR 277
S V R+RS SL S S SRS+S S R+ S SR
Sbjct: 208 SPYVSRSRSCSLSHSYS-GRSRSLSPKAKHSRRSFSLSR 245
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 152/221 (68%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G SS DR + + GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHS-SSIDRH-------------SHSSGRGGRGGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V D
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDG-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMK+AIRKLDD+EFRN ++R + VK YD
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYD 188
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 158/231 (68%), Gaps = 24/231 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 160 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 207
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 154/219 (70%), Gaps = 30/219 (13%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLFYKYGRILDI+LK+PPRPP Y F+EF++ RDAEDAI+
Sbjct: 3 RSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIK 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA----GGAGAGAGAGRFGI 119
RDGY FDG RLRVE AH G GRG S YGG + GG G G G G G+
Sbjct: 63 ARDGYVFDGHRLRVEFAHSG-GRGHPS------YGGDRHSNSYRGGGGGGGGGGGGGRGV 115
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
SR SEYRV+V GLPSSASWQDLKDHMR AGDVCFA+V R+S
Sbjct: 116 SRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRES------------------- 156
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
+GT G+VD+TN +DMK AIRKLDDTEFRNP++ I V+
Sbjct: 157 NGTRGIVDFTNYDDMKNAIRKLDDTEFRNPFSHSYIRVR 195
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 152/221 (68%), Gaps = 35/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHG GRGPSS + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHG--GRGPSSF--------------DRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R I V+ YD
Sbjct: 146 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYD 186
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 152/221 (68%), Gaps = 33/221 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G SS DR + + GR G S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHS-SSIDRH-------------SHSSGRGGRGGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V D
Sbjct: 107 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDG-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMK+AIRKLDD+EFRN ++R + VK YD
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYD 188
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 153/221 (69%), Gaps = 21/221 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIQGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDGR------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD
Sbjct: 160 GTTGVVDYTCYEDMKYAVKKLDDTEFRNAFSHGYVRVREYD 200
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 150/221 (67%), Gaps = 35/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDR----------------SSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R + V+ YD
Sbjct: 146 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYD 186
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 147/215 (68%), Gaps = 33/215 (15%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE ARDAEDAIR
Sbjct: 3 RASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGYNFDGCRLRVELAHGG R S D + +G G S+ S
Sbjct: 63 GRDGYNFDGCRLRVELAHGGR-RHSSPVDH-------------YSSYSGSSGSRGPSKRS 108
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G
Sbjct: 109 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-------------------GGMT 149
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
G+VDYTN +DMKYAI+KLDD+EFRN ++R I V+
Sbjct: 150 GIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVR 184
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 153/231 (66%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR+ EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG PS + + + S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV D +G
Sbjct: 105 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS---------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVVDY+N +DMKYAIRKLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 149 ---GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE---SRSVSRS 193
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 151/216 (69%), Gaps = 34/216 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSARRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRIT 216
T G+VDYTN +DMKYAIRKLDD++FRN ++R I
Sbjct: 147 ETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRCSIV 182
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 153/231 (66%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR+ EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG PS + + + S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV D +G
Sbjct: 105 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS---------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVVDY+N +DMKYAIRKLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 149 ---GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE---SRSVSRS 193
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 153/221 (69%), Gaps = 21/221 (9%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHG GR S R GGG GG G G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG--GRRSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPS 118
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 119 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 159
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD
Sbjct: 160 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD 200
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 157/231 (67%), Gaps = 28/231 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 115 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 155
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 156 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 149/221 (67%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R RTIYVGNLP DIRE E+EDLF KYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNGRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGC+LRVELAHGG G S DR Y +GR G
Sbjct: 61 AIYGRDGYDFDGCKLRVELAHGGKG---PSFDRPNSY--------------TSSGRRGAL 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRVIV GLPSSASWQDLKDHMR+AGDVCF++V P +T
Sbjct: 104 RRSDYRVIVTGLPSSASWQDLKDHMRRAGDVCFSDV--------YPGAGAIT-------- 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
G+V++ N EDMK+AIRKLDD+EFRN ++R I V+ Y+
Sbjct: 148 ---GIVEFPNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYN 185
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 157/231 (67%), Gaps = 28/231 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+
Sbjct: 115 RRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR------------------- 155
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 156 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 153/231 (66%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R++RTIYVGNLP DIR+ EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDGCRLRVE+AHGG PS + + + S
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF+EV D +G
Sbjct: 105 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS---------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVVDY+N +DMKYAIRKLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 149 ---GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE---SRSVSRS 193
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 149/231 (64%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 135
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 136 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 173
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSR 226
GT G+VDYTN +DMKYAI+KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 174 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 224
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 154/219 (70%), Gaps = 30/219 (13%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRTIYVGNLP D+RE E++DLFYKYGRILDI+LK+PPRPP Y F+EF++ RDAEDAI+
Sbjct: 3 RSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIK 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA----GGAGAGAGAGRFGI 119
RDGY FDG RLRVE AH G GRG S YGG + GG G G G G G+
Sbjct: 63 ARDGYVFDGHRLRVEFAHSG-GRGHPS------YGGDRHSNSYRGGGGGGGGGGGGGRGV 115
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
SR SEYRV+V GLPSSASWQDLKDHMR AGDVCFA+V R+S
Sbjct: 116 SRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRES------------------- 156
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
+GT G+VD+TN +DMK AIRKLDDTEFRNP++ I V+
Sbjct: 157 NGTRGIVDFTNYDDMKNAIRKLDDTEFRNPFSHSYIRVR 195
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 149/231 (64%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 102 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 161
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 162 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 210
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 211 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 248
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSR 226
GT G+VDYTN +DMKYAI+KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 249 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 299
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 152/221 (68%), Gaps = 35/221 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHG GRGPSS + + + AG+ G S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHG--GRGPSSF--------------DRSSSYSSAGQRGAS 104
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R I V+ YD
Sbjct: 146 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYD 186
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 149/231 (64%), Gaps = 38/231 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNS-SSRDRYSSHSNGRGGRGVSRRS---------- 135
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
EYRVIV GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 136 ---EYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 173
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSR 226
GT G+VDYTN +DMKYAI+KLDD+EFRN +++ + V+ YD RSP R
Sbjct: 174 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRDSRSPGR 224
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 155/222 (69%), Gaps = 33/222 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR SRTIYVGNLP D+R EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+ARDAED
Sbjct: 1 MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+ RDGYNFDG RLRVELAHG GRG SSS + G+G G+S
Sbjct: 61 AIQYRDGYNFDGFRLRVELAHG--GRGYSSS------------VDRYSSYSGGSGSRGVS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF++V R+
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRER-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 222
G G+VDYTN +DMKYAIRKLDD+EFRN ++R I V+ YDR
Sbjct: 148 GMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAFIRVREYDR 189
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 149/221 (67%), Gaps = 36/221 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+ R TIYVGNLP DIRE EV+DLFYKYGRI++I+LKIPPRPP + FVEFE+A DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDA-DAED 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G + + + AG+ G S
Sbjct: 60 AIYGRDGYNFDGHRLRVELAHGGRG----------------TSSFDRSSSYSSAGQRGAS 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 104 KRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA-------------------G 144
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R + V+ YD
Sbjct: 145 ATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYD 185
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 150/220 (68%), Gaps = 33/220 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG I I+LK+PPRPP Y FVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVE AHGG G SS DR + G G +S
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHS-SSRDRYNSHSNGRGGRG-------------VS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMRKAGDVCF++V D
Sbjct: 107 RRSEYRVLVSGLPSSASWQDLKDHMRKAGDVCFSQVFHDGR------------------- 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRY 220
GT G+VDYTN +DMKYAI+KLDD+EFRN +++G + V+ Y
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREY 187
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 146/215 (67%), Gaps = 34/215 (15%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R + TIYVGNLP DIRE E+EDLFYKYGRI+DI+LK+PPRPP YCF+EF+NARDAEDAIR
Sbjct: 3 RSNSTIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDGY FDG RLRVE AHG + SS D G+ + R +
Sbjct: 63 GRDGYKFDGHRLRVERAHGRA----SSVD-----------VYYGSHSSGSRSSGLYRRST 107
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
YRVIV GLP+SASWQDLKDHMR+AGDVCF++V R SGT
Sbjct: 108 GYRVIVHGLPTSASWQDLKDHMRRAGDVCFSQVYRKG-------------------SGTV 148
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
GVVDYT+ EDMKYAIRKLDD+EFRNP++R I V+
Sbjct: 149 GVVDYTSYEDMKYAIRKLDDSEFRNPFSRSYIRVR 183
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 150/229 (65%), Gaps = 43/229 (18%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYK--------YGRILDIELKIPPRPPCYCFVEF 52
M+ R TIYVGNLP DIRE EV+DLFYK YGRI++I+LKIPPRPP + FVEF
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEF 60
Query: 53 ENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
E+ARDAEDAI GRDGYNFDG RLRVELAHGG G + + +
Sbjct: 61 EDARDAEDAIYGRDGYNFDGHRLRVELAHGGR----------------GTSSFDRSSSYS 104
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
AG+ G S+ S+YRV+V GLPSSASWQDLKDHMR+AGDVCF +V R++
Sbjct: 105 SAGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREA------------ 152
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+ DYTN EDMK+AIRKLDD+EFRN ++R + V+ YD
Sbjct: 153 -------GATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYVRVREYD 194
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 147/218 (67%), Gaps = 33/218 (15%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R SRT+YVGNLP DIR EVEDLFYKYG I+DI+LKIPPRPP Y FVEFE+A DA+ AIR
Sbjct: 3 RASRTLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIR 62
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G DGYNFD CRLRVELAHGG R S DR + +G G +HS
Sbjct: 63 GLDGYNFDACRLRVELAHGGR-RHSSPVDRY-------------SSYSGSSGSRGPPKHS 108
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G
Sbjct: 109 DYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-------------------GGMT 149
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
G+VDYTN +DMKYAI+KLDD+EFRN ++R I V+ YD
Sbjct: 150 GIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 145/215 (67%), Gaps = 24/215 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHRLRVELAHGG-----RRSSHDARGSYSGGGRGGRDGGDGGVRGRGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR------------------- 156
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRI 215
GT G+VDYT+ EDMKYAI+KLDDTEFRN ++ G +
Sbjct: 157 GTTGIVDYTSYEDMKYAIKKLDDTEFRNAFSHGYV 191
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 154/231 (66%), Gaps = 28/231 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLF KYG ++ I+LK+PPRPP Y FVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG RLRVELAHGG SSD G GG GG G G S
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR----RSSD--DTRGSFNGGGRGGGRGRGDGGSRGPS 114
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE+RV+V L SSASWQDLKDH+ K GDVCF++V RD+
Sbjct: 115 RRSEFRVLVTWLASSASWQDLKDHIAKGGDVCFSQVYRDAR------------------- 155
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ YD SR SRS
Sbjct: 156 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYD---SRKDSRS 203
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 149/233 (63%), Gaps = 25/233 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIR EV+DLFYKYG I+ ++L+ PPR P Y FV+FE+A +AE+
Sbjct: 1 MSSCASRTLYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRG-PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
AIRGRDGYNF+GCRLRVELA+GG P R+ + G G G
Sbjct: 61 AIRGRDGYNFNGCRLRVELAYGGRKHSTPGHGGRKHSFPGRHYNTCSGISENHGP----- 115
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
S+HS++RV+V GLPSSASWQDLKDHMR+AGDVCF+ V
Sbjct: 116 SKHSDHRVLVTGLPSSASWQDLKDHMRQAGDVCFSRVFPGR------------------- 156
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSR 232
G G+VDY N +DMK+AI+KLDD+EFRN ++R + V++ D S S+S S
Sbjct: 157 GGKTGIVDYKNYDDMKHAIKKLDDSEFRNAFSRSYVRVRKDDSRRSYSQSPSH 209
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 139/221 (62%), Gaps = 53/221 (23%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP + FVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGYNFDG RLRVELAHGG G S ++ +G G R G+S
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN-----------------SGGGGRRGGVS 169
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
RH+EYRV+V GLPSSASWQDLKDHMR AGDV + C
Sbjct: 170 RHTEYRVLVTGLPSSASWQDLKDHMRNAGDV---------------------VTLKCT-- 206
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
++ IRKLDD+EF+N +++ I VK YD
Sbjct: 207 -------------VRVVIRKLDDSEFKNAFSKAYIRVKEYD 234
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 136/197 (69%), Gaps = 34/197 (17%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRILDI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S + + + A R G+S
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYD---------------RSSSYSSARRGGVS 105
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 106 RRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 146
Query: 181 GTYGVVDYTNPEDMKYA 197
T G+VDYTN +DMKYA
Sbjct: 147 ETIGIVDYTNYDDMKYA 163
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 134/199 (67%), Gaps = 32/199 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY+FDG RLRVELAHGG G S G GR G+S
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDR-------------HSSYSGSGGRGRGGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD S
Sbjct: 108 RRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDG-------------------S 148
Query: 181 GTYGVVDYTNPEDMKYAIR 199
GT G+VDYTN EDMKYA++
Sbjct: 149 GTTGIVDYTNYEDMKYAVK 167
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 133/212 (62%), Gaps = 33/212 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SRT+YVGNLP DIRE EV+ LF KYG I I+LK+PPRPPCY FV F++A +A+D
Sbjct: 54 MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADD 113
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI DGY+FDGCRLRVE AH G SSS R G GG G+S
Sbjct: 114 AICECDGYDFDGCRLRVEAAHVGYCN--SSSRDRYSIHSNGQGGR------------GVS 159
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
HSEYRV+V LPSSAS QDLKDHMRKAG VCF++V D
Sbjct: 160 SHSEYRVLVNRLPSSASCQDLKDHMRKAGAVCFSQVVHDGR------------------- 200
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWAR 212
T G+VDYTN +DMKYAI+ LD +EF+N ++R
Sbjct: 201 VTTGIVDYTNCDDMKYAIKNLDGSEFQNAFSR 232
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/270 (48%), Positives = 151/270 (55%), Gaps = 31/270 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG LRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-----RSSHDARGSYSGRGRGGRGGGDGGGRERGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD G
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRG------------------ 157
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
T G+VDYT+ EDMKYA LDDTEFRN ++ + V+ YD
Sbjct: 158 -TTGIVDYTSYEDMKYA---LDDTEFRNAFSHEYVRVREYDSRRDSRSPSRGRSYSKSRS 213
Query: 241 IVRRNRSKSLERSVSRSV----SRSMSASP 266
R ++S+ SP
Sbjct: 214 RGRSPSRSRSRSRSRSKSRSPKAKSLRRSP 243
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 132/200 (66%), Gaps = 24/200 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG LRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGG-----RRSSHDARGSYSGRGRGGRGGGDGGGRERGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR------------------- 156
Query: 181 GTYGVVDYTNPEDMKYAIRK 200
GT G+VDYT+ EDMKYAI+K
Sbjct: 157 GTTGIVDYTSYEDMKYAIKK 176
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 131/199 (65%), Gaps = 24/199 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLF KYG ++ I+LKIPPRPP Y FVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGY+FDG LRVELAHGG S G G G G G G S
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGG-----RRSSHDARGSYSGRGRGGRGGGDGGGRERGPS 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMRK G+VCF++V RD
Sbjct: 116 RRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR------------------- 156
Query: 181 GTYGVVDYTNPEDMKYAIR 199
GT G+VDYT+ EDMKYA+R
Sbjct: 157 GTTGIVDYTSYEDMKYAVR 175
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 143/239 (59%), Gaps = 59/239 (24%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYK FE+ RDA+D
Sbjct: 72 MSRRNSRTIYVGNLPGDIREREVEDLFYK----------------------FEDPRDADD 109
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVELAHGG G+ S DR Y G GG +S
Sbjct: 110 AICGRDGYNFDGYRLRVELAHGGRGQS-YSYDRPRSYSSGRRGG--------------VS 154
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 155 RRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA-------------------G 195
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 239
T G+VDYT EDMKYAIRKLDD+EFRN ++R I V+ S SRSR+ S SR RS
Sbjct: 196 ATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVR---ESISRSRTPVSSPSRGRS 251
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 133/202 (65%), Gaps = 33/202 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIR EVED+FYK+G I+DI+LKIPPRPP Y FV+FE+ARDAED
Sbjct: 1 MSSRSSRTIYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY+FDG RLRVELAHGG G S + G+ G S
Sbjct: 61 AIYYRDGYDFDGFRLRVELAHGGRGSSSSVD--------------RYSSYSGGSSSRGAS 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRV+V GLP SASWQDLKDHMRKAGDVCF++V R+
Sbjct: 107 RRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRER-------------------G 147
Query: 181 GTYGVVDYTNPEDMKYAIRKLD 202
G G+VDYTN +DMKYA+RKLD
Sbjct: 148 GMTGIVDYTNYDDMKYALRKLD 169
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/162 (67%), Positives = 120/162 (74%), Gaps = 13/162 (8%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R+SRTIYVGNLP DIRE EVEDLFYKYG+I+DI+LK+PPRPP Y FVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GRDGYNFDG RLRVE AHGG G S G G R G+S
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHD-------------RSSGFGGGGGARRGVS 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
RHSEYRV+V GLPSSASWQDLKDHMRKAGDVCF+EV R+ G
Sbjct: 108 RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 124/162 (76%), Gaps = 17/162 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++V R+ G
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGG 145
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/155 (67%), Positives = 120/155 (77%), Gaps = 17/155 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R SRTIYVGNLP DIRE EVEDLFYKYGRI+DI+LKIPPRPP Y FVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI GR GY+FDG RLRVELAHG GRGP S DR + + + AGR G +
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHG--GRGP-SFDR--------------SSSYSSAGRRGAA 103
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAE 155
+ ++YRV+V GLPSSASWQDLKDHMR+AGDVCF++
Sbjct: 104 KRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSD 138
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 127/203 (62%), Gaps = 38/203 (18%)
Query: 29 KYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGP 88
KYG I I+LK+PPRPP Y FVEFE+ +DAEDAIRGRDGY+FDG RLRVE AHGG G
Sbjct: 2 KYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNS- 60
Query: 89 SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKA 148
SS DR + G G + EYRVIV GLPSSASWQDLKDHMRKA
Sbjct: 61 SSRDRYSSHSNGRGGRGVSRRS-------------EYRVIVNGLPSSASWQDLKDHMRKA 107
Query: 149 GDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GDVCF++V D GT G+VDYTN +DMKYAI+KLDD+EFRN
Sbjct: 108 GDVCFSQVFHDGR-------------------GTTGIVDYTNYDDMKYAIKKLDDSEFRN 148
Query: 209 PWARGRITVKRYD-----RSPSR 226
+++ + V+ YD RSP R
Sbjct: 149 AFSKSYVRVREYDSRRDSRSPGR 171
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 146/239 (61%), Gaps = 28/239 (11%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---------------------GT 158
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GVV++ EDMKYA++KLDD+ FR+ I VK S R RS R R RS SR
Sbjct: 159 -GVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSR 216
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 146/239 (61%), Gaps = 28/239 (11%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---------------------GT 158
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GVV++ EDMKYA++KLDD+ FR+ I VK S R RS R R RS SR
Sbjct: 159 -GVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSR 216
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 146/239 (61%), Gaps = 28/239 (11%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---------------------GT 158
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GVV++ EDMKYA++KLDD+ FR+ I VK S R RS R R RS SR
Sbjct: 159 -GVVEFLRYEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSSGDRGRSEDRERGRSHSR 216
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 145/239 (60%), Gaps = 28/239 (11%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G+++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---------------------GT 158
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GVV++ EDMKYA++K DD+ FR+ I VK S R RS R R RS SR
Sbjct: 159 -GVVEFLRYEDMKYAVKKXDDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSR 216
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 127/214 (59%), Gaps = 47/214 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR EVED+FYKYGRI DI++K P RPP + FV+FE+ARDAEDAIRGRDGY
Sbjct: 6 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF--GISRHSEYR 126
++DG RLRVE A+G GR S+ D + G+ R+ I + E+
Sbjct: 66 DYDGARLRVEAANG--GRRESARD-----------------SARGSARYPRNIRGNGEFT 106
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
V V LP SWQDLKD MRKAGDV F EV D G GVV
Sbjct: 107 VEVSNLPPRVSWQDLKDFMRKAGDVTFTEV--DGRGG--------------------GVV 144
Query: 187 DYTNPEDMKYAIRKLDDTEFR----NPWARGRIT 216
+Y+N DMKYA+ KLDDTEFR N + R R T
Sbjct: 145 EYSNKRDMKYAVEKLDDTEFRGRSENSYVRVRQT 178
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 90/97 (92%), Gaps = 2/97 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS RFSRTIYVGNLPSDI+EYE+EDLFYKYGRILDIELKIPPRPPCYCFVEFE+ RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGY 97
AIR RDGYNFDGCRLRVELAHG GRGPSSSDRR Y
Sbjct: 61 AIRARDGYNFDGCRLRVELAHG--GRGPSSSDRRSSY 95
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 132/202 (65%), Gaps = 21/202 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE EVEDLF+KYGRI ++LKI PRPP + FVEFE+ RDA DA+RGRDG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RLRVE++HG G GG G GG GG G G G +G SR ++YRVI
Sbjct: 61 EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNP--YGPSRRTDYRVI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S+SWQDLKDHMR+AG+V F++V RD G G++DY
Sbjct: 119 VTGLPISSSWQDLKDHMRRAGEVTFSQVMRDGR-------------------GMLGLIDY 159
Query: 189 TNPEDMKYAIRKLDDTEFRNPW 210
EDM+ A+RKLD +EFRNP+
Sbjct: 160 ATREDMETALRKLDGSEFRNPY 181
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 140/233 (60%), Gaps = 28/233 (12%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 120 SQYRVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD---------------------GT 158
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWAR-GRITVKRYDRSPSRSRSRSRSR 234
GVV++ +DMKYA++KLDD+ FR+ I VK R RS R R
Sbjct: 159 -GVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSGGDRGRSEDRER 210
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 131/205 (63%), Gaps = 27/205 (13%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 6 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAV 64
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 65 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 120
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 121 SQYRVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD---------------------GT 159
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ +DMKYA++KLDD+ FR
Sbjct: 160 -GVVEFLRHDDMKYAVKKLDDSRFR 183
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 132/206 (64%), Gaps = 27/206 (13%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+
Sbjct: 5 GRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RDGY++DG RLRVE GG GPS++ RGG G G +G G GR +R
Sbjct: 64 HARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRGAGDSGRGGRGEMSNSRGRGPPARR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+V +D GT
Sbjct: 120 SQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---------------------GT 158
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ +DMKYA++KLDD+ FR+
Sbjct: 159 -GVVEFLRHDDMKYAVKKLDDSRFRS 183
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 145/246 (58%), Gaps = 36/246 (14%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+DA+
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYG--GGGAGGAGGAGAGAGAGRFGIS 120
+ RDGY++DG RLRVE GG G G SS RGG GGGA G G A
Sbjct: 63 KARDGYDYDGYRLRVEFPRGG-GPGRYSSSSRGGNSDRGGGARDRGNRGPPA-------- 113
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S++RV+V GLP+S SWQDLKDHMR+AGDVCFA+V +D
Sbjct: 114 RRSQFRVMVTGLPASGSWQDLKDHMREAGDVCFADVYKD--------------------- 152
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
GT GVV++ EDMKYAI+KLDD+ FR+ G + R + + R R RS
Sbjct: 153 GT-GVVEFLRHEDMKYAIKKLDDSRFRS--HEGEVAYIRVREDSTNNDDRRGGEYRDRSY 209
Query: 241 IVRRNR 246
RR R
Sbjct: 210 SPRRRR 215
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 123/215 (57%), Gaps = 47/215 (21%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S+ IYVGNLP IR EVEDLFYK+G+I DI+LK+P RPP Y F++FE+ARDAEDAI
Sbjct: 1 MSKRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEA 60
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
RDGY ++G RLRVE A P + ++ G + G+
Sbjct: 61 RDGYKYEGQRLRVERA------NPKNIEKEKHVRGSRSKGSNT----------------- 97
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
V V LPS SWQDLKD MRKAG+V FA++ + + G
Sbjct: 98 --VKVTNLPSRVSWQDLKDFMRKAGEVTFAKIDKHGD----------------------G 133
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
+VD+ + +DMKYAI++LDDT+FRN + R + VK+
Sbjct: 134 IVDFKHHDDMKYAIKRLDDTKFRNRFDRAYVRVKQ 168
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 143/243 (58%), Gaps = 42/243 (17%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR ++VGNLPSD+++ ++ED+FYKYGRI I++K P + FVEF++ RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFVEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ GRDGY+FDGCR+RVEL G R YG G
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGP---RGPGGRPLYGPDPRSPRHGPPP---------- 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S YRV++ GLP + SWQDLKDHMR AG++C+A+V RD
Sbjct: 107 RRSGYRVVISGLPDTGSWQDLKDHMRDAGEICYADVFRD--------------------- 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR----SPSRSRSRSRSRSR 236
GT GVV+YTN EDMKYA+RKLDDT+F++ G +T R SP+RSRSRS + +
Sbjct: 146 GT-GVVEYTNYEDMKYALRKLDDTKFKS--HEGEVTYIRVREANINSPNRSRSRSYTPRK 202
Query: 237 SRS 239
+RS
Sbjct: 203 TRS 205
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 144/243 (59%), Gaps = 42/243 (17%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR ++VGNLPSD+++ ++ED+FYKYGRI I++K P + F+EF++ RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ GRDGY+FDGCR+RVEL G RGP YG G
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGR---PLYGPDSRSPRRGPPPRR-------- 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
S YRVIV GLP + SWQDLKDHMR AG++C+A+V RD
Sbjct: 109 --SGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD--------------------- 145
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR----SPSRSRSRSRSRSR 236
GT GVV+YTN EDMKYA+RKLDDT+F++ G +T R SP+RSRSRS + +
Sbjct: 146 GT-GVVEYTNYEDMKYALRKLDDTKFKS--HEGEVTYIRVKEANINSPNRSRSRSHTPRK 202
Query: 237 SRS 239
+RS
Sbjct: 203 TRS 205
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 128/206 (62%), Gaps = 26/206 (12%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G + +YVGNLP D+RE EVED+F+KYGRI +++K R P + FVEFE+ RDAEDA+
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
R RDGY FDG R+RVE G RGPS R GG G G G G R
Sbjct: 64 RARDGYEFDGRRIRVEFTRGVGPRGPSG---RPLQDGGDHRGGDFRGGRGGGRGGGPQRR 120
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+ YRVIV GLP + SWQDLKDHMR AGDVC+A+V+RD GT
Sbjct: 121 TGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---------------------GT 159
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++T ED+KYA+RKLDDT+FR+
Sbjct: 160 -GVVEFTRYEDVKYAVRKLDDTKFRS 184
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 127/221 (57%), Gaps = 34/221 (15%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
I+VGNLP D+RE E+EDLFYKYGRI +I+LK+PPRPP + FVEFE AEDA++GRDG
Sbjct: 7 VIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGRDG 66
Query: 68 YNFDGCRLRVELAHGGSGR--------GPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
Y FD +RVEL+ GG G G DR GGGG G A F
Sbjct: 67 YVFDNNPIRVELSRGGMGGRSGGDKTSGAPPRDRDEPRGGGGGATFGRAAPPPVPSNFR- 125
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
+ S YR V+ LP SASWQDLKDH RK VC T N++ V+
Sbjct: 126 QKGSAYRATVKNLPMSASWQDLKDHFRK---VC-------------------TPNYVNVF 163
Query: 180 ---SGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
G GVV++ PED+ AIRKLDDTEFRNP+ R I V
Sbjct: 164 RDRGGVLGVVEFDTPEDLARAIRKLDDTEFRNPFERAYIRV 204
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 122/210 (58%), Gaps = 43/210 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYKYGRI DIE+K P RPP + FV FE+ RDAEDAIRGRDG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F+G RLR E++ G RG RR R S+YRVI
Sbjct: 61 SFEGARLRCEMSRGNGPRGSRQQPRRD------------------------LRRSDYRVI 96
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V LP SASWQDLKDH R+ G+V + +V R + SG G+V++
Sbjct: 97 VSNLPPSASWQDLKDHFRQVGEVVYTDVDRSLKS-----------------SG--GIVEF 137
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
+ + + AI++LDDTEF+NP+ + I VK
Sbjct: 138 ASRSEQEAAIKQLDDTEFKNPFDKVYIRVK 167
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 131/209 (62%), Gaps = 25/209 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D+ E +++D+FYK+GRI+DI+LK P RPP + F+ F++ARDAE+A+R RDGY
Sbjct: 4 IYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGY 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ DG RLRVE++ GR GG+GG GG G G + +EYRVI
Sbjct: 64 DMDGSRLRVEISR---GRRDPFGMGGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVI 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP SASWQDLKDHMRKAG+ + +V D +G G+V +
Sbjct: 121 VTGLPPSASWQDLKDHMRKAGEPTYTDV--DHKGG--------------------GIVHF 158
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITV 217
+DM YA+RKLD ++FRNP+ + RI+V
Sbjct: 159 RTRDDMDYALRKLDGSDFRNPFEKSRISV 187
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 124/213 (58%), Gaps = 50/213 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR EVED+FYKYGRI DI++K P RPP + FV+FE+ RDAEDAIRGRDGY
Sbjct: 533 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGY 592
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF--GISRHSEYR 126
++DG RLRVE A+GG RR A G+GR+ I +Y
Sbjct: 593 DYDGARLRVEPANGG---------RR-------------ESAPRGSGRYPRNIRGTGDYT 630
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
V + LP SWQDLKD MRKAGDV F EV D G G+V
Sbjct: 631 VEISNLPPRVSWQDLKDFMRKAGDVVFTEV--DGRGG--------------------GIV 668
Query: 187 DYTNPEDMKYAIRKLDDTEFR----NPWARGRI 215
+Y+N DMKYA+ KLDD+EFR N + R R+
Sbjct: 669 EYSNKRDMKYAVEKLDDSEFRGRSENSYVRVRL 701
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 128/206 (62%), Gaps = 33/206 (16%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+DA+
Sbjct: 4 GRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SR 121
+ RDGY++DG RLRVE GG GP G Y G G + G G +R
Sbjct: 63 KARDGYDYDGYRLRVEFPRGG---GP------GSYRGSRQGNSDRNSRGGDRNNRGPPAR 113
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
S++RV+V GLPSS SWQDLKDHMR+AGDVCFA+V +D G
Sbjct: 114 RSQFRVMVTGLPSSGSWQDLKDHMREAGDVCFADVYKD---------------------G 152
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEFR 207
T GVV++ EDMKYAI+KLDD+ FR
Sbjct: 153 T-GVVEFLRHEDMKYAIKKLDDSRFR 177
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 118/209 (56%), Gaps = 39/209 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIRE EVEDLF KYG+++ I++K P RPP + FVEF + RDAEDA+RGRDGY
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RLRVELA G GRG G +RV+
Sbjct: 72 DFYGNRLRVELAKGAGGRGRGFGGGPPPGFRPRQTG--------------------FRVL 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V+GLP SASWQDLKDH+R+ + V RD + G GVV++
Sbjct: 112 VKGLPMSASWQDLKDHVRQVCKPAYTNVFRDRD-------------------GVTGVVEF 152
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITV 217
+DM+ IRKLDDTEFRNP+ R + V
Sbjct: 153 ETADDMERTIRKLDDTEFRNPFDRAYVRV 181
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 137/225 (60%), Gaps = 29/225 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R +VED+F KYG++L ++LK R P + FVEFE+ARDAEDA+RGRDGY
Sbjct: 7 IYVGNLPTTVRAKDVEDIFSKYGKVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE G RGP G + A G G+ +G R + YRVI
Sbjct: 66 DYEGYRLRVEFPRGLGPRGPGGRPYDTGRNLSLSRNASGGGSSSGG------RRANYRVI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP+S SWQDLKDHMR+AGDVC+ +V RD GT G+V+Y
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD---------------------GT-GIVEY 157
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
EDMKYA+RKLDDT+F++ R D SR+ SRSRS
Sbjct: 158 GRYEDMKYALRKLDDTKFKSHEGETSYIRVREDNGESRAHSRSRS 202
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 123/205 (60%), Gaps = 53/205 (25%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP+D+RE ++EDLFYKYGRI +IELK +P + FV FE+ RDAEDAI
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 189
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GR+GY++ CRLRVE P + RGG+ GG G +R S
Sbjct: 190 GRNGYDYGQCRLRVEF--------PRTYGSRGGWPRGGRNGPP-------------TRRS 228
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 229 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------M 266
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 267 GMVEYLRKEDMEYALRKLDDTKFRS 291
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 126/201 (62%), Gaps = 38/201 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE P S G GGGGA G GR+G SR SEYRV
Sbjct: 78 DYDGYRLRVEF--------PRSGRGGGRGGGGGA-------LGTPRGRYGPPSRRSEYRV 122
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
IV GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV+
Sbjct: 123 IVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVE 160
Query: 188 YTNPEDMKYAIRKLDDTEFRN 208
+ EDM YAIRKLD+T+FR+
Sbjct: 161 FVRKEDMTYAIRKLDNTKFRS 181
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 135/225 (60%), Gaps = 32/225 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 22 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 80
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG GPSSS R G G G G G G +R S+YRV+
Sbjct: 81 DYDGYRLRVEFPRGG---GPSSSFRGRGGGDSRGRGDMGNSRGRGPP----ARRSQYRVL 133
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVCFA+V +D GT GVV++
Sbjct: 134 VTGLPPSGSWQDLKDHMREAGDVCFADVYKD---------------------GT-GVVEF 171
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
EDMKYA++KLDD+ FR+ G + R S RSRS
Sbjct: 172 LRYEDMKYAVKKLDDSRFRS--HEGEVAYIRVKEDHGGSGDRSRS 214
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 134/225 (59%), Gaps = 23/225 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R ++ED+F K+G++L ++LK RPP + FVEFE+ RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RLRVE G RGP G G G G G+G R + YRVI
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP+S SWQDLKDHMR+AGDVC+A+++RD GT GVV+Y
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD---------------------GT-GVVEY 163
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
+DMKYAIRKLDDT+F++ R D RSRSRS
Sbjct: 164 ARLDDMKYAIRKLDDTKFKSHEGETAYIRVREDDINGGGRSRSRS 208
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 131/227 (57%), Gaps = 37/227 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SEYRVI
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSEYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD--RSPSRSRSRSRS 233
EDM YA+RKLD+T+FR+ + D RSPS RSRSRS
Sbjct: 163 VRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRS 209
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEF++ RDAEDA++ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVQARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G + G G G GR +R S+YRV+
Sbjct: 69 DYDGYRLRVEFPRGSA--------------------PGRGSMGPGRGRGPPARRSQYRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVFKD---------------------GT-GVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMKYA++KLDD+ FR+
Sbjct: 147 LRYEDMKYAVKKLDDSRFRS 166
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ GG G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTYGSRGGWPRGGRNGP-------------PTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ GG G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTYGSRGGWPRGGRNGP-------------PTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G + G G G GR +R S+YRV+
Sbjct: 69 DYDGYRLRVEFPRGSA--------------------PGRGSMGPGRGRGPPARRSQYRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVFKD---------------------GT-GVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMKYA++KLDD+ FR+
Sbjct: 147 LRYEDMKYAVKKLDDSRFRS 166
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G + G G G GR +R S+YRV+
Sbjct: 69 DYDGYRLRVEFPRGSA--------------------PGRGSMGPGRGRGPPARRSQYRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVFKD---------------------GT-GVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMKYA++KLDD+ FR+
Sbjct: 147 LRYEDMKYAVKKLDDSRFRS 166
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 133/230 (57%), Gaps = 44/230 (19%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAI 62
R + IYVGNLP D + ++E+LF KYG I I+LK R P + FVEFE+ DA DA+
Sbjct: 7 RTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAV 66
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVEL G +RR GGGGA G SR
Sbjct: 67 RGRDGYNFDGYALRVELPRTGV------PERRFNRGGGGASGP--------------SRR 106
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S++RVIV GLP + SWQDLKDHMR+AGDV +A+V RD GT
Sbjct: 107 SDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---------------------GT 145
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRS-PSRSRSRS 231
GVV++ EDMKYAIR+LDD++FR+ R +R+ SRSRSRS
Sbjct: 146 -GVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYIRVREERAGGSRSRSRS 194
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 131/221 (59%), Gaps = 36/221 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLPSDIRE ++EDLFYKYG+IL I LK R P + FVEFE+ RDAEDAI GRDGY
Sbjct: 9 IYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAIDGRDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+FDGCRLRVE P GG G G G G A R S++RVI
Sbjct: 69 DFDGCRLRVE--------APRGGGGGGGDYGRRGRGNGSGGGRGPA------RRSDHRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AG+V FA+V RD GT GVV++
Sbjct: 115 VSGLPQTGSWQDLKDHMREAGEVYFADVYRD---------------------GT-GVVEF 152
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRS 229
+ D+KYA++ LDD++FR+ + DR SRSRS
Sbjct: 153 AHYSDVKYALKHLDDSKFRSHEGETSYVRVKEDRGRSRSRS 193
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 124/208 (59%), Gaps = 44/208 (21%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS + +YVGNLP DIR ++EDLF+KYG+I I+LK R P + FVEFE+ RDAED
Sbjct: 1 MSYKAESRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNR-RGPPFAFVEFEDPRDAED 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ RDGY++DG +LRVE G S R RGG GR +
Sbjct: 60 AVSARDGYDYDGYKLRVEFPRGNSARP------RGG---------------PSRGRGPPA 98
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S+YRVIV GLP + SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 99 RRSQYRVIVTGLPPTGSWQDLKDHMREAGDVCYADVYKD--------------------- 137
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ EDMKYA++KLDD+ FR+
Sbjct: 138 GT-GVVEFLRYEDMKYAVKKLDDSRFRS 164
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 129/207 (62%), Gaps = 30/207 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNESRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GR ++R G G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG-GRNEHRNNR------GNERGNQREGGRGGGGRGPPT 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLPSS SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 113 KRSQYRVLVTGLPSSGSWQDLKDHMREAGDVCFADTYKD--------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GT GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 GT-GVVEFLRHEDMKYAIKKLDDSRFR 177
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ G G +R S++RV+
Sbjct: 77 DYGQCRLRVEF--------PRTYGGRGGWPRGARNGP-------------PTRRSDFRVL 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 116 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 153
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 154 LRKEDMEYALRKLDDTKFRS 173
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 123/199 (61%), Gaps = 39/199 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP D+RE +VEDLFYKYG I + LK PP + FVEFE+ RDAED++ GR+GY
Sbjct: 11 VYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPP-FAFVEFEDRRDAEDSVHGRNGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
NFDG +LRVE G GPS +R YG GG SR +++RV+
Sbjct: 70 NFDGYKLRVEHPRGN---GPS---QRPAYGMSSFRARGGPP----------SRRTDFRVM 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 114 VSGLPPTGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 151
Query: 189 TNPEDMKYAIRKLDDTEFR 207
N +DM++A++ LDDT+FR
Sbjct: 152 VNRDDMQFAVKHLDDTKFR 170
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 135/225 (60%), Gaps = 29/225 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R +VED+F KYGR+L ++LK R P + FVEFE+ARDAEDA+RGRDGY
Sbjct: 7 IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE G RGP G + + G G SR + YRVI
Sbjct: 66 DYEGYRLRVEFPRGLGPRGPGGRPYDSG------RNLSVSRSAGGGGSSSGSRRANYRVI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP+S SWQDLKDHMR+AGDVC+ +V RD GT G+V+Y
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD---------------------GT-GIVEY 157
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
EDMKYA+RKLDDT+F++ + D SR+ SRSRS
Sbjct: 158 GRYEDMKYALRKLDDTKFKSHEGETSYIRVKEDNGESRAHSRSRS 202
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + R G+ GG G +R S++RV+
Sbjct: 108 DYGQCRLRVEF--------PRTYGGRAGWPRGGRNGPP-------------TRRSDFRVL 146
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 147 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 184
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 185 LRKEDMEYALRKLDDTKFRS 204
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 17 IYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + RGG+ G G +R S++RV+
Sbjct: 77 DYGQCRLRVEF--------PRTYGGRGGWPRGARNGP-------------PTRRSDFRVL 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 116 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 153
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 154 LRKEDMEYALRKLDDTKFRS 173
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 109/170 (64%), Gaps = 34/170 (20%)
Query: 52 FENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAG 111
FE+ RDA+DAI GRDGYNFDG RLRVELAHGG G+ S DR Y G GG
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQS-YSYDRPRSYSSGRRGG------- 52
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILL 171
+SR SEYRV+V GLPSSASWQDLKDHMR+AGDVCF++V R++
Sbjct: 53 -------VSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA----------- 94
Query: 172 TLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
T G+VDYT EDMKYAIRKLDD+EFRN ++R I V+ YD
Sbjct: 95 --------GATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVREYD 136
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 129/211 (61%), Gaps = 23/211 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R ++ED+F K+G++L ++LK RPP + FVEFE+ RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RLRVE G RGP G G G G G+G R + YRVI
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP+S SWQDLKDHMR+AGDVC+A+++RD GT GVV+Y
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRD---------------------GT-GVVEY 163
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
+DMKYAIRKLDDT+F++ +G R
Sbjct: 164 ARLDDMKYAIRKLDDTKFKSHEFQGETAYIR 194
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 10 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + R G+ GG G +R S++RV+
Sbjct: 70 DYGQCRLRVEF--------PRTYGGRAGWPRGGRNGP-------------PTRRSDFRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 146
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 147 LRKEDMEYALRKLDDTKFRS 166
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 128/206 (62%), Gaps = 26/206 (12%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SGR IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ RDA+DA
Sbjct: 3 SGRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDNRDADDA 61
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
++ RDGY++DG RLRVE GG GP S G G GG G R +R
Sbjct: 62 VKARDGYDYDGYRLRVEFPRGG---GPGSYRGSRGSTSGDRGGGSSGRDRGGNNRGPPAR 118
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
S++RV+V GLP+S SWQDLKDHMR+AGDVCFA+V +D G
Sbjct: 119 RSQFRVVVTGLPASGSWQDLKDHMREAGDVCFADVYKD---------------------G 157
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEFR 207
T GVV+Y EDMKYAI+KLDD+ FR
Sbjct: 158 T-GVVEYLRHEDMKYAIKKLDDSRFR 182
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNNRNDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 KRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 ---GVVEFLRHEDMKYAIKKLDDSRFR 175
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 121/201 (60%), Gaps = 39/201 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GA GR+G SR SEYRV
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFG----------------GIGGAPRGRYGPPSRRSEYRV 119
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV+
Sbjct: 120 VVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVE 157
Query: 188 YTNPEDMKYAIRKLDDTEFRN 208
+ EDM YA+RKLD+T+FR+
Sbjct: 158 FVRKEDMTYAVRKLDNTKFRS 178
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNNRNDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 KRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 ---GVVEFLRHEDMKYAIKKLDDSRFR 175
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNNRNDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 KRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 ---GVVEFLRHEDMKYAIKKLDDSRFR 175
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 121/201 (60%), Gaps = 39/201 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GA GR+G SR SEYRV
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFG----------------GIGGAPRGRYGPPSRRSEYRV 119
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV+
Sbjct: 120 LVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVE 157
Query: 188 YTNPEDMKYAIRKLDDTEFRN 208
+ EDM YA+RKLD+T+FR+
Sbjct: 158 FVRKEDMTYAVRKLDNTKFRS 178
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 122/202 (60%), Gaps = 47/202 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVEL--AHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
++ CRLRVE A+GG G P +S R G +R S++R
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRAS--RNG---------------------PPTRRSDFR 112
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
V+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V
Sbjct: 113 VLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMV 150
Query: 187 DYTNPEDMKYAIRKLDDTEFRN 208
+Y EDM+YA+RKLDDT+FR+
Sbjct: 151 EYLRKEDMEYALRKLDDTKFRS 172
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 121/201 (60%), Gaps = 40/201 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GA GR+G SR SEYRV
Sbjct: 76 DYDGYRLRVEFPRSGR-----------------GSRGGFGIGGAPRGRYGPPSRRSEYRV 118
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV+
Sbjct: 119 VVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVE 156
Query: 188 YTNPEDMKYAIRKLDDTEFRN 208
+ EDM YA+RKLD+T+FR+
Sbjct: 157 FVRKEDMTYAVRKLDNTKFRS 177
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 110/175 (62%), Gaps = 24/175 (13%)
Query: 26 LFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSG 85
F KYG ++ I+LKIPPRPP Y FVEFE+ARDA+DAI GRDGY+FDG LRVELAHGG
Sbjct: 24 FFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAHGG-- 81
Query: 86 RGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHM 145
S G G G G G G SR SEYRV+V GLPSSASWQDLKDHM
Sbjct: 82 ---RRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHM 138
Query: 146 RKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRK 200
RK G+VCF++V RD GT G+VDYT+ EDMKYAI+K
Sbjct: 139 RKGGEVCFSQVFRDGR-------------------GTTGIVDYTSYEDMKYAIKK 174
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 127/206 (61%), Gaps = 26/206 (12%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G + +YVGNLP D+RE EVED+F+KYGRI +++K R P + FVEFE+ RDAEDA+
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAV 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
R RDGY FDG R+RVE G RGP + GG G G G G R
Sbjct: 64 RARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQ---DGGDHRGGDFRGGRGGGRGGGPQRR 120
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+ YRVIV GLP + SWQDLKDHMR AGDVC+A+V+RD GT
Sbjct: 121 TGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---------------------GT 159
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++T ED+KYA+RKLDDT+FR+
Sbjct: 160 -GVVEFTRYEDVKYAVRKLDDTKFRS 184
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 122/204 (59%), Gaps = 43/204 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI----PPRPPCYCFVEFENARDAEDAIRG 64
IYVGNLP DIR ++ED+FYKYG I DI+LK PP + FVEFE+ RDAEDA+ G
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP----FAFVEFEDPRDAEDAVYG 73
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
RDGY++DG RLRVE R G G G GG GG G SR SE
Sbjct: 74 RDGYDYDGYRLRVEFP-------------RSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE 120
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT G
Sbjct: 121 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-G 158
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRN 208
VV++ EDM YA+RKLD+T+FR+
Sbjct: 159 VVEFVRKEDMTYAVRKLDNTKFRS 182
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 125/208 (60%), Gaps = 30/208 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IY+GNLPSD+++ ++EDLFYKYGRI I++K+ P + F+EF++ RDA D
Sbjct: 1 MGSRRESRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ GRDGY+ DGCR+RVE+ G RGP A A R
Sbjct: 60 AVHGRDGYDMDGCRIRVEMTRGVGPRGPGGRPLY-------ASERDRDRRPPPAPRGPPP 112
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S YRVIV GLPSS SWQDLKDHMR AGD+C+A+V RD
Sbjct: 113 RRSGYRVIVSGLPSSGSWQDLKDHMRDAGDICYADVYRD--------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV+YT +DMKYAIRKLDDT+F++
Sbjct: 152 GT-GVVEYTKYDDMKYAIRKLDDTKFKS 178
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP G Y G G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GP------GSYRGNRNDRNNGRDGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 KRSQYRVMVTGLPPSGSWQDLKDHMREAGDVCFADTYKDGS------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 ---GVVEFLRHEDMKYAIKKLDDSRFR 175
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 121/200 (60%), Gaps = 36/200 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D++E ++EDLF+KYG+I DIELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F C+LRVE P SS G +G AGG G G +R SE+RVI
Sbjct: 66 GFGDCKLRVEY--------PRSS------GSKFSGPAGGGGGGPRGRFGPPTRRSEFRVI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD E GVV++
Sbjct: 112 VTGLPPTGSWQDLKDHMREAGDVCFADVQRDGE----------------------GVVEF 149
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+R+LD TEFR+
Sbjct: 150 LRREDMEYALRRLDSTEFRS 169
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 119/199 (59%), Gaps = 45/199 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I I+LK PP + FVEF++ RDAEDA+RGRDGY
Sbjct: 10 IYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N+DG RLRVE G S G G SR SEYRV+
Sbjct: 69 NYDGYRLRVEFPRGTSR----------------------GGYRGGRRVGQPSRRSEYRVL 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 107 VSGLPPTGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 144
Query: 189 TNPEDMKYAIRKLDDTEFR 207
N EDMKYA+++LDD++FR
Sbjct: 145 LNYEDMKYAVKQLDDSKFR 163
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 126/199 (63%), Gaps = 23/199 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG ILDI+LK PP + FVEFE+ RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG G GG GGGG GG G G +R SEYR +
Sbjct: 75 DYDGYRLRVEFPRGGRAGGGPPRGIGGGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCL 134
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD GT GVV++
Sbjct: 135 VSGLPPTGSWQDLKDHMREAGDVCFADVYRD---------------------GT-GVVEF 172
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDMKYA + LDDT+FR
Sbjct: 173 LRYEDMKYAAKHLDDTKFR 191
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 121/200 (60%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEFE+ RDA+DA+R RDGY
Sbjct: 14 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPP-FAFVEFEDPRDADDAVRARDGY 72
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG G + +G A R +R SEYRV+
Sbjct: 73 DYDGYRLRVEFPRGGGGGARGGRSQPDRFGP------------RPAARGPPARRSEYRVL 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVCFA+ +D GT GVV++
Sbjct: 121 VTGLPPSGSWQDLKDHMREAGDVCFADTFKD---------------------GT-GVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMKYA++KLDD+ FR+
Sbjct: 159 LRHEDMKYAVKKLDDSRFRS 178
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 119/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPP-------------SRRSEYRVI 123
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 161
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 162 VRKEDMTYAVRKLDNTKFRS 181
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 129/203 (63%), Gaps = 23/203 (11%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP D+RE EVED+F+KYGRI I++K R P + FVEFE+ RDAEDA+R R
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DGY FDG R+RVE G RGP GG GG G G G G G R + Y
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPGGRPLNEEGGGYRGGGDFRGGRGGGRGGGGPQRRTGY 126
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RVIV GLP + SWQDLKDHMR+AGDVC+A+V+RD GT GV
Sbjct: 127 RVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD---------------------GT-GV 164
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++T +D+KYA+RKLDDT+FR+
Sbjct: 165 VEFTRYDDVKYAVRKLDDTKFRS 187
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 34/207 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG GP S RG G G G A R
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG---GPGSY--RGNRNDRSRDGGRMGGRGPPAKR---- 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
S+YRV+V GLP S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 --SQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDGS------------------- 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 150 ---GVVEFLRHEDMKYAIKKLDDSRFR 173
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 120/200 (60%), Gaps = 37/200 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG ILDI+LK PP + FVEFE+ RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE GG G G G G +R SEYR +
Sbjct: 75 DYDGYRLRVEFPRGGGGGGGGGG--------------GLGGGPGRGRGGPPARRSEYRCL 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD GT GVV++
Sbjct: 121 VSGLPPTGSWQDLKDHMREAGDVCFADVYRD---------------------GT-GVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMKYA + LDDT+FR+
Sbjct: 159 LRYEDMKYAAKHLDDTKFRS 178
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 119/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPP-------------SRRSEYRVI 123
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 161
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 162 VRKEDMTYAVRKLDNTKFRS 181
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 118/200 (59%), Gaps = 34/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D++E ++EDLF+KYG+I DIELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F C+LRVE R G G G GG G G +R SE+RVI
Sbjct: 66 GFGDCKLRVEYP------------RSSGSKFSGPAGGGGGGGGPRGRFGPPTRRSEFRVI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD E GVV++
Sbjct: 114 VTGLPPTGSWQDLKDHMREAGDVCFADVQRDGE----------------------GVVEF 151
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+R+LD TEFR+
Sbjct: 152 LRREDMEYALRRLDSTEFRS 171
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 31/208 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR +Y+GNLP DIR+ ++EDLFYKYG I I++K+ P + F+EF++ RDA D
Sbjct: 41 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 99
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY DGCR+RVE+ G RGP G G G
Sbjct: 100 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPL--------YGPDRGERDRRPPPPRGPP 151
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S YRV+V GLP + SWQDLKDHMR+AGD+C+A+V +D
Sbjct: 152 RRSGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVFKD--------------------- 190
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV+YT +DMKYAI+KLDDT+F++
Sbjct: 191 GT-GVVEYTRQDDMKYAIKKLDDTKFKS 217
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 125/200 (62%), Gaps = 32/200 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLPS++++ ++EDLF KYGRI I++K P + F+EFE++RDAEDAIRGRDGY
Sbjct: 9 VYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAP-FAFLEFEDSRDAEDAIRGRDGY 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ DGCR+RVE+ G RGP GG G A +G YRVI
Sbjct: 68 DLDGCRIRVEMTRGVGPRGPGGRPIYGGGGYDRRPPAPRGPPVRRSG---------YRVI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ GLP+S SWQDLKDHMR AGD+C+A+V +D GT GVV+Y
Sbjct: 119 ISGLPASGSWQDLKDHMRDAGDICYADVYKD---------------------GT-GVVEY 156
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
T +DMKYA+RKLDDT+F++
Sbjct: 157 TKYDDMKYAVRKLDDTKFKS 176
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 122/199 (61%), Gaps = 32/199 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VEDLF+++G++ ++LK PP + FVEFE+ RDA DA++ R Y
Sbjct: 11 IYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPP-FVFVEFEDHRDASDAVKARSNY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG +LRVE GG GP SS R G + G G +R S+YRV+
Sbjct: 70 DYDGYKLRVEFPRGG---GPGSSYR------GRSNNDRGGSGRGGGNNRPAARRSQYRVL 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLPSS SWQDLKDHMR+AGDVCFA+V +D GT GVV++
Sbjct: 121 VSGLPSSGSWQDLKDHMREAGDVCFADVYKD---------------------GT-GVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDMKYAI+KLDD+ FR
Sbjct: 159 LRYEDMKYAIKKLDDSRFR 177
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 135/225 (60%), Gaps = 29/225 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+ +R +VED+F KYGR+L ++LK R P + FVEFE+ARDAEDA+RGRDGY
Sbjct: 7 IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAVRGRDGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE G RGP G + + G G SR + YRVI
Sbjct: 66 DYEGYRLRVEFPRGLGPRGPGGRPYDSG------RNLSVSRSACGGGSSSGSRRASYRVI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP+S SWQDLKDHMR+AGDVC+ +V RD GT G+V+Y
Sbjct: 120 VSGLPASGSWQDLKDHMREAGDVCYTDVLRD---------------------GT-GIVEY 157
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
EDMKYA+RKLDDT+F++ + D SR+ SRSRS
Sbjct: 158 GRYEDMKYALRKLDDTKFKSHEGETSYIRVKEDNGESRAHSRSRS 202
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 133/206 (64%), Gaps = 28/206 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA-----GRFG-ISRH 122
++DG RLRVE G G G GG GGGG GG GG G G G GR+G SR
Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
SEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT 176
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDM YA+RKLD+T+FR+
Sbjct: 177 -GVVEFVRKEDMTYAVRKLDNTKFRS 201
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 118/211 (55%), Gaps = 44/211 (20%)
Query: 11 VGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA----IRGRD 66
VGNLP DIRE +++DLFYKYGRI DIE+K P RPP + FVEF+N DAEDA + D
Sbjct: 1 VGNLPLDIRERDIDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTD 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F+G RLRVE++ G + GY G+G A R S+YR
Sbjct: 61 GVMFEGARLRVEMSRGTAATY--------GYDKRGSGKAPPRNL----------RRSDYR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
VI+ GLP SASWQDLKD R+AG++ + +V R G+V
Sbjct: 103 VIISGLPKSASWQDLKDFFRQAGEIVYTDVDRQGG----------------------GIV 140
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
++ N +D YAI+K DDTEF NP+ RG I V
Sbjct: 141 EFANEDDRDYAIKKFDDTEFSNPFDRGYIRV 171
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 119/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SEYRVI
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSEYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 163 VRKEDMTYAVRKLDNTKFRS 182
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 122/200 (61%), Gaps = 34/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + F+EFE+ RDA+DA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE P S G G GG G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEF--------PRSGRGGGRGGFGGGGVGGAPRGRYGPP----SRRSEYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPQSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 163 VRKEDMTYAVRKLDNTKFRS 182
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 31/208 (14%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR +Y+GNLP DIR+ ++EDLFYKYG I I++K+ P + F+EF++ RDA D
Sbjct: 1 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AIRGRDGY DGCR+RVE+ G RGP G G G
Sbjct: 60 AIRGRDGYELDGCRIRVEMTRGVGPRGPGGRPL--------YGPDRGERDRRPPPPRGPP 111
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R S YRV+V GLP + SWQDLKDHMR+AGD+C+A+V +D
Sbjct: 112 RRSGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVFKD--------------------- 150
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV+YT +DMKYAI+KLDDT+F++
Sbjct: 151 GT-GVVEYTRQDDMKYAIKKLDDTKFKS 177
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 133/208 (63%), Gaps = 26/208 (12%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G + +YVGNLP D+R+ EVED+F+KYGRI I++K R P + FVEFE+ RDAEDA+
Sbjct: 6 GSEDQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAV 64
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSS--DRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
R RDGY FDG R+RVE G RGP + GGY GG G G G G G G
Sbjct: 65 RARDGYEFDGRRIRVEFTRGVGPRGPGGRPLNDDGGYSGGRDRGDYRGGRGGGRGG-GPQ 123
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R + YRVIV GLP + SWQDLKDHMR+AGDVC+A+V+RD
Sbjct: 124 RRTGYRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD--------------------- 162
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++T +D+KYA+RKLDDT+FR+
Sbjct: 163 GT-GVVEFTRYDDVKYAVRKLDDTKFRS 189
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 120/200 (60%), Gaps = 34/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G GG G SR SEYRV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG------------GGGGGGGAPRGRYGPPSRRSEYRVV 125
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 126 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 163
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 164 VRKEDMTYAVRKLDNTKFRS 183
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 127/200 (63%), Gaps = 24/200 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE SGRG GG GGGG GG GG G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPR--SGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVI 134
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 135 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 172
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 173 VRKEDMTYAVRKLDNTKFRS 192
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE G+G R G +R S++RV+
Sbjct: 76 DYGQCRLRVEFPRTYGGQGGWPRGGRNG---------------------PPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 130/203 (64%), Gaps = 25/203 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI---SRHSEY 125
++DG RLRVE G G G GG GGG GG GG G G GA R SR SEY
Sbjct: 110 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 169
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV
Sbjct: 170 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GV 207
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++ EDM YA+RKLD+T+FR+
Sbjct: 208 VEFVRKEDMTYAVRKLDNTKFRS 230
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 145 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 204
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 205 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 251
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 252 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 289
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 290 VRKEDMTYAVRKLDNTKFRS 309
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 130/203 (64%), Gaps = 25/203 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI---SRHSEY 125
++DG RLRVE G G G GG GGG GG GG G G GA R SR SEY
Sbjct: 108 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 167
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV
Sbjct: 168 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GV 205
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++ EDM YA+RKLD+T+FR+
Sbjct: 206 VEFVRKEDMTYAVRKLDNTKFRS 228
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 125/200 (62%), Gaps = 25/200 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G GG GGGG GG GG G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRG---MGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVI 133
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 134 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 171
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 172 VRKEDMTYAVRKLDNTKFRS 191
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 130/203 (64%), Gaps = 25/203 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 37 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 96
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI---SRHSEY 125
++DG RLRVE G G G GG GGG GG GG G G GA R SR SEY
Sbjct: 97 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 156
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV
Sbjct: 157 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GV 194
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++ EDM YA+RKLD+T+FR+
Sbjct: 195 VEFVRKEDMTYAVRKLDNTKFRS 217
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VED+FYKYG I DI+LK + FVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G G G G SR SEYRVI
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPP-------------SRRSEYRVI 123
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 124 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 161
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 162 VRKEDMTYAVRKLDNTKFRS 181
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 125/200 (62%), Gaps = 26/200 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VEDLFYKYG I DI+LK P + FV+F++ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG GGGG GG G G SR SE RV+
Sbjct: 77 DYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGGGGGGMGPPRGRYGPP----SRRSENRVV 132
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 133 VSGLPPSGSWQDLKDHMREAGDVCYADVFRD---------------------GT-GVVEF 170
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 171 VRKEDMTYAVRKLDNTKFRS 190
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 124/200 (62%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP ++R+ +++D+FYKYG+I+ ++LKI PP + FVEFE+ RDA+DA+ GRDGY
Sbjct: 8 IYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPP-FAFVEFEDKRDADDAVYGRDGY 66
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
DG RLRVE G + G S G GG G G SR SEYRV+
Sbjct: 67 TLDGYRLRVEFPRGSARGGYGRS------------GGGGGGGGGARRGGAPSRRSEYRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVCFA+V RD GT GVV++
Sbjct: 115 VSGLPPTGSWQDLKDHMREAGDVCFADVFRD---------------------GT-GVVEF 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
+DMKYA++ LDD++FR+
Sbjct: 153 LRYDDMKYAVKHLDDSKFRS 172
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 163 VRKEDMTYAVRKLDNTKFRS 182
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 122/206 (59%), Gaps = 44/206 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP D++E ++EDLF+KYG+I DIELK IP + FV FE+ RDAEDA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIP-----FAFVRFEDPRDAEDAVY 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRH 122
GR+GY +LRVE P SS G G GG G GRFG +R
Sbjct: 61 GRNGYGLGDSKLRVEY--------PRSS---GAKFSGPMGGGERGEGGGPKGRFGPPTRR 109
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
SE+RVIV GLP S SWQDLKDHMR+AGDVCFA+V RD E
Sbjct: 110 SEFRVIVTGLPPSGSWQDLKDHMREAGDVCFADVQRDGE--------------------- 148
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDM+YA+R+LD TEFR+
Sbjct: 149 -GVVEFVRREDMEYALRRLDRTEFRS 173
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 165/309 (53%), Gaps = 74/309 (23%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAIRGRD 66
T+YVGNLPS++RE E+ED+F+KYG I +I++K R P + F++F++ RDA++A+R RD
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE G RGP G G G G + S YR
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGR---PTRDNGSRFGRNG----------GPPKRSNYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV GLP S SWQD+KDH+++AG++C+A V++G GVV
Sbjct: 112 LIVEGLPRSGSWQDIKDHLKQAGEICYAN----------------------VHNGE-GVV 148
Query: 187 DYTNPEDMKYAIRKLDDTEFRN---PWARGRITV---------KRYDRSPSRSRSR---- 230
++ ED++YAIRK DDT+FR+ A R+ KR RS SRS+S
Sbjct: 149 EFERYEDLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPIRGR 208
Query: 231 ------------------SRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRA 272
S S+SRSRS + R++R +S S +R VSRS SP+ R
Sbjct: 209 CSRSSSRSKSSIRGRRNGSASKSRSRSPVSRQHRDRSESGSPARRVSRSR--SPISRQR- 265
Query: 273 RSRSRSVSP 281
R+RS S +P
Sbjct: 266 RARSESGTP 274
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 108 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 154
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 155 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 192
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 193 VRKEDMTYAVRKLDNTKFRS 212
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 114/199 (57%), Gaps = 46/199 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRRGRYGPP------------------------SRRSENRVV 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 114 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 151
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 152 VRKEDMTYAVRKLDNTKFR 170
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 123/206 (59%), Gaps = 33/206 (16%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
R + IYVGNLP D++ +VE+LF KYG I +I+LK R P + F+EFE+ DA DA+
Sbjct: 2 ARSTTKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLK-SRRGPPFAFIEFEDELDAADAV 60
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVE GG+ Y G G G G G G SR
Sbjct: 61 RGRDGYNFDGYALRVEFPRGGTA----------SYNGSGGNFNSFRRGGFGRGGGGPSRR 110
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S++RV+V GLP + SWQDLKDHMR+AGDV +A+V RD GT
Sbjct: 111 SDFRVVVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---------------------GT 149
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDMKYA+RKLDD++FR+
Sbjct: 150 -GVVEFLRYEDMKYAVRKLDDSKFRS 174
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 29/212 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++L ++LK PP + FVEF++ RDAEDA+ RDGY
Sbjct: 8 IYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPP-FAFVEFDDPRDAEDAVHARDGY 66
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAG-GAGGAGAGAGAGRFGISRHSEYRV 127
++DG RLRVE G GP S GG GG GGA G+G R +R S+YRV
Sbjct: 67 DYDGYRLRVEFPRGN---GPHRSGGGGGSSSGGGSYNRGGASGGSGRSRGPPARRSQYRV 123
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+V GLP+S SWQDLKDHMR+AGDVC+A+V +D GVV+
Sbjct: 124 LVTGLPASGSWQDLKDHMREAGDVCYADVYKDGS----------------------GVVE 161
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
+ +DMKYA+RKLDD+ FR+ G +T R
Sbjct: 162 FLRYDDMKYAVRKLDDSRFRS--HEGEVTYIR 191
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 118/214 (55%), Gaps = 61/214 (28%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCY--------------CFVEFEN 54
IYVGNLP DIRE ++ED+FYK+G + DI+LK RPP + FVEF +
Sbjct: 18 IYVGNLPPDIREKDIEDMFYKFGSVADIDLK-NKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 55 ARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA 114
RDA+DA+ RDGYN+DG R+RVE G G S
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRGTKGFKGSRPRGP-------------------- 116
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLN 174
R S YRVIV GLPS+ SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 117 ----PPRRSSYRVIVSGLPSTGSWQDLKDHMREAGDVCYADVYRD--------------- 157
Query: 175 FLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ PEDMKYA+++LDDT+FR+
Sbjct: 158 ------GT-GVVEFLRPEDMKYAVKQLDDTKFRS 184
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 118/200 (59%), Gaps = 41/200 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+++RE ++E+LFYKYGRI DIELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 38 IYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNGY 97
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE + G GG G G SR SE+RV+
Sbjct: 98 DYGQCRLRVEFPK-------------------PSRGRGGFGGGPRGRNGPPSRRSEFRVL 138
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GVV++
Sbjct: 139 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGVVEF 176
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 177 LRKEDMEYALRKLDDTKFRS 196
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 110 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 156
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 157 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 194
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 195 VRKEDMTYAVRKLDNTKFRS 214
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 159/308 (51%), Gaps = 75/308 (24%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAIRGRD 66
T+YVGNLPSD+RE E+ED+F+KYG I +I++K R P + F++F++ RDA++A+R RD
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE G R G G G G + S YR
Sbjct: 65 GYEFDGKRLRVEFPRGQGP---RGPGGRPTRDNGSRFGRNG----------GPPKRSNYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV GLP S SWQD+KDH+++AG++C+A V++G GVV
Sbjct: 112 LIVEGLPRSGSWQDIKDHLKQAGEICYAN----------------------VHNGE-GVV 148
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITV--------------KRYDRSPSRSRSR-- 230
++ ED++YA RK DDT+FR+ +G KR RS SRS+S
Sbjct: 149 EFERYEDLEYAFRKYDDTKFRS--HKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPIR 206
Query: 231 -----------------SRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRAR 273
S S+SRSRS + R +R +S S +R VSRS SP+ R
Sbjct: 207 GRSSSRSKSSIRGRRTGSASKSRSRSPVSRHHRDRSESGSPARRVSRSR--SPISRQRP- 263
Query: 274 SRSRSVSP 281
+RS S +P
Sbjct: 264 ARSESGTP 271
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 25/206 (12%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS S TI++GNLP D+RE E++ LF KYGRI +++K + FV+F ++RDA+D
Sbjct: 1 MSRDASDTIFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADD 60
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+RGRDGY+FDG R+RVEL G RGP R GY G G G G
Sbjct: 61 AVRGRDGYDFDGKRIRVELTRGSGPRGPGGRPVRDGYDRGYDRRDDGYGRRQS---HGPP 117
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R SE R I+ GLP + SWQD+KDH++ AGD+C+A+V R+ +
Sbjct: 118 RRSENRAIIEGLPPTGSWQDIKDHLKSAGDICYADVGRNGD------------------- 158
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEF 206
G+V++ EDMKYAI+K DDT+F
Sbjct: 159 ---GIVEFEKHEDMKYAIKKFDDTKF 181
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 82 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 141
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 142 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 188
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 189 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 226
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 227 VRKEDMTYAVRKLDNTKFRS 246
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 116/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 30 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYGRNGY 89
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE GR G G +R S++RV+
Sbjct: 90 DYGQCRLRVEFPRTYGGR---------------------GGWPRGGRNGPPTRRSDFRVL 128
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 129 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 166
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 167 LRKEDMEYALRKLDDTKFRS 186
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 114/204 (55%), Gaps = 63/204 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI-----PPRPPCYCFVEFENARDAEDAIR 63
+YVGNLP D+RE ++ D+FYKYG I D++LK PP + FVEFE+ RDAEDA++
Sbjct: 11 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP----FAFVEFEDPRDAEDAVK 66
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GRDG+ FDG R+RVE GGSG P R S
Sbjct: 67 GRDGHEFDGYRIRVEFPRGGSGPPP--------------------------------RRS 94
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
++RV V GLP + SWQDLKDHMR+AGDV F +V +D GT
Sbjct: 95 DFRVQVSGLPPTGSWQDLKDHMREAGDVLFTDVFKD---------------------GT- 132
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ +DMK+AIR LDD++FR
Sbjct: 133 GVVEFARYDDMKFAIRNLDDSKFR 156
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 122/207 (58%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG +R G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNR---------NDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLP+S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGS------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 ---GVVEFLRHEDMKYAIKKLDDSRFR 175
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 122/207 (58%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG +R G G GR +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNR---------NDRSRDGGGRMGGRGPPA 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ S+YRV+V GLP+S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGS------------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDMKYAI+KLDD+ FR
Sbjct: 152 ---GVVEFLRHEDMKYAIKKLDDSRFR 175
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------VGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 117/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 29/208 (13%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R IYVGNLP DIR +++DLF+K+G++ ++LK PP + FVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ RDGY++DG RLRVE GG +R GG GG G G A R
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRNRDGGGGGGRMGGRGPPAKR---- 115
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
S+YRV+V GLP+S SWQDLKDHMR+AGDVCFA+ +D
Sbjct: 116 --SQYRVMVTGLPTSGSWQDLKDHMREAGDVCFADTYKDGS------------------- 154
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDMKYAI+KLDD+ FR+
Sbjct: 155 ---GVVEFLRHEDMKYAIKKLDDSRFRS 179
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLD+T+FR+
Sbjct: 153 LRKEDMEYALRKLDETKFRS 172
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 120/200 (60%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEFE+ RDAEDA RDGY
Sbjct: 10 IYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFEDPRDAEDAAHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G + G G G G GR +R S+YRV+
Sbjct: 69 DYDGYRLRVEFPRGSA--------------------PGRGGMGPGRGRGPPARRSQYRVL 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D GT GVV++
Sbjct: 109 VSGLPPSGSWQDLKDHMREAGDVCYADVFKD---------------------GT-GVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMKYA++KLDD+ FR+
Sbjct: 147 LRYEDMKYAVKKLDDSRFRS 166
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRTGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------VGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 162/309 (52%), Gaps = 74/309 (23%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAIRGRD 66
T+YVGNLPSD+RE E+ED+F+KYG I +I++K R P + F++F++ RDA++A+R D
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE G R G G G G + S YR
Sbjct: 65 GYEFDGKRLRVEFPRGKGP---RGPGGRPTRDNGSRFGRNG----------GPPKRSNYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV GLP S SWQD+KDH+++AG++C+A V++G GVV
Sbjct: 112 LIVEGLPRSGSWQDIKDHLKQAGEICYAN----------------------VHNGE-GVV 148
Query: 187 DYTNPEDMKYAIRKLDDTEFRN---PWARGRITV---------KRYDRSPSRSRSR---- 230
++ E+++YAIRK DDT+FR+ A R+ KR RS SRS+S
Sbjct: 149 EFERYENLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPNRGR 208
Query: 231 ------------------SRSRSRSRSRIVRRNRSKSLERSVSRSVSRSMSASPVKSSRA 272
S S+SRSRS + R++R +S S +R VSRS SP+ R
Sbjct: 209 CSRSSSRSKSSIRGRRTGSASKSRSRSPVSRQHRDRSESGSPARRVSRSR--SPISRQR- 265
Query: 273 RSRSRSVSP 281
R+RS S +P
Sbjct: 266 RARSESGTP 274
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLD+T+FR+
Sbjct: 153 LRKEDMEYALRKLDETKFRS 172
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPSD+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLD+T+FR+
Sbjct: 153 LRKEDMEYALRKLDETKFRS 172
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 117/210 (55%), Gaps = 46/210 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D+RE +++DLFYKYGRI I++K P RPP Y FV FE+ RDA+DA+ RD Y
Sbjct: 5 IYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNY 64
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+FDG R+RVELA+ P D R G+GGG +++R+
Sbjct: 65 DFDGGRIRVELAN----ETPRRRDDR-GFGGG-------------------RNRTDFRLE 100
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V LP SWQDLKD+ + GDV +A+VSR+ E GVV++
Sbjct: 101 VSDLPDRTSWQDLKDYFKPVGDVLYADVSRNGE----------------------GVVEF 138
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
EDM A RKLD + FRNP+ I V+
Sbjct: 139 ATKEDMFAAKRKLDGSTFRNPFDSREIRVR 168
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 134/231 (58%), Gaps = 26/231 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G+I I+LK PP + FVEFE+ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPP-FAFVEFEDPRDAEDAVHARDGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG GG GG G G R +R + YRVI
Sbjct: 70 DYDGYRLRVEFPRGSQNSG-GGHSGGRGGDGGRGGGDGGGSNGGGRSRGPPARRTNYRVI 128
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AGDVC+A+ +D GT G+V++
Sbjct: 129 VTGLPPTGSWQDLKDHMREAGDVCYADTYKD---------------------GT-GMVEF 166
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRS 239
EDMKYAI+KLDD+ FR+ G ++ R +R RSRS S
Sbjct: 167 LRYEDMKYAIKKLDDSRFRS--HEGEVSYVRVKEDSGDGNGGTRDRSRSYS 215
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 116/199 (58%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ +DAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT G V++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GAVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 124/219 (56%), Gaps = 37/219 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR +E RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRAENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV+
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEC 162
Query: 189 TNPEDMKYAIRKLDDTEFR-NPWARGRIT-VKRYDRSPS 225
EDM YA+RKLD+T+FR + W I + RSPS
Sbjct: 163 VPKEDMTYAVRKLDNTKFRSHEWETAYIPRIVDRPRSPS 201
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 121/199 (60%), Gaps = 35/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE PS G GGGG GGA G SR SE RV+
Sbjct: 78 DYYGYRLRVEFP-------PSGRGTGRGGGGGGGGGAPRGRYGPP------SRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV+++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVMEF 162
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 163 VRKEDMTYAVRKLDNTKFR 181
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 119/201 (59%), Gaps = 42/201 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++EDLFYK+G I DI+LK P + FVEFE+ RD+ DA+ RDGY
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
++DG RLRVE G G GG G G R+G SR S+YRV
Sbjct: 77 DYDGYRLRVEFPR-------------------GGRGGGGRGMGPPRTRYGPPSRRSDYRV 117
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+V GLP S SWQDLKDHMR+AGDVC+ +V RD GT GVV+
Sbjct: 118 VVSGLPQSGSWQDLKDHMREAGDVCYTDVYRD---------------------GT-GVVE 155
Query: 188 YTNPEDMKYAIRKLDDTEFRN 208
+ EDM YA+RKLD+T+FR+
Sbjct: 156 FVRKEDMTYAVRKLDNTKFRS 176
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE G G G S GG G SR SE RV+
Sbjct: 78 DYYGYRLRVEFPRSGRGTGRGGS-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 125 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 162
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 163 VRKEDMTYAVRKLDNTKFRS 182
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 116/200 (58%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAED + GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 107
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE PS G GG G SR SE RV+
Sbjct: 108 DYYGYRLRVEFP-------PSGRGTG------RGGSGGGGGGAPRGRYGPPSRRSENRVV 154
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 155 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 192
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 193 VRKEDMTYAVRKLDNTKFRS 212
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 110/186 (59%), Gaps = 45/186 (24%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYK--------------------------YGRIL 34
MS S T+Y+GNLP+DIRE E EDLFYK YGRIL
Sbjct: 1 MSRWNSCTVYLGNLPNDIREREHEDLFYKDGVTPHHLDSTCGYHPIWVMQEDLHKYGRIL 60
Query: 35 DIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRR 94
DI+LK PPR P Y FVE DAEDAI G DGY+F ++VELAHGG+G S DR
Sbjct: 61 DIDLKXPPRRPVYAFVEVIYRCDAEDAIYGHDGYDFX--IIQVELAHGGTG---PSFDRL 115
Query: 95 GGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFA 154
Y + +GR +RHS YRV+V GLPSSASWQDLKDHMR+AGDVCF+
Sbjct: 116 RSY--------------SSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFS 161
Query: 155 EVSRDS 160
+V R++
Sbjct: 162 DVYREA 167
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 116/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGD C+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDACYADVQKDG----------------------VGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 153 LRKEDMEYALRKLDDTKFRS 172
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 113/200 (56%), Gaps = 46/200 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYV NLP+D+RE ++EDLFYKYGRI DIELK + FV FE+ RDAEDAI GR+GY
Sbjct: 18 IYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAEDAIYGRNGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVEL G G SR SE+RV+
Sbjct: 78 DYGQCRLRVELP------------------------RNPGGGGPRGRTGPPSRRSEFRVL 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AG VC+A+V +D GVV++
Sbjct: 114 VSGLPPSGSWQDLKDHMREAGGVCYADVQKDG----------------------MGVVEF 151
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+R+LDD++FR+
Sbjct: 152 LRKEDMEYALRRLDDSKFRS 171
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 117/206 (56%), Gaps = 46/206 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
IYVGNLPSDIRE E+EDLF +YGRI +ELK P + F+ +++ RDAEDA+
Sbjct: 18 IYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAP-----FAFISYQDPRDAEDAV 72
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
GR+GY+F CRLRVE G G GG G+ SR
Sbjct: 73 FGRNGYDFGSCRLRVEFPRSFRGSGGGGG-------------GGGGYGGSRGRNGPPSRR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 120 SEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDG---------------------- 157
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V++ EDM+YA+RKLDDT+FR+
Sbjct: 158 MGIVEFIRKEDMEYALRKLDDTKFRS 183
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 117/202 (57%), Gaps = 53/202 (26%)
Query: 12 GNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIRGRD 66
GNLP+D+RE ++EDLFYKYGRI +IELK +P + FV FE+ RDAEDAI GR+
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIYGRN 126
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY++ CRLRVE YGG G GG +R S++R
Sbjct: 127 GYDYGQCRLRVEFPRT--------------YGGRGGWPRGGRNGPP-------TRRSDFR 165
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
V+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V
Sbjct: 166 VLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------VGMV 203
Query: 187 DYTNPEDMKYAIRKLDDTEFRN 208
+Y EDM+YA+RKLDDT+FR+
Sbjct: 204 EYLRKEDMEYALRKLDDTKFRS 225
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 119/216 (55%), Gaps = 36/216 (16%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
GR IYVGNLP DIR ++E F ++G+++ ++LK PP + FVEFE+ARDAEDA+
Sbjct: 6 GRSDARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPP-FAFVEFEDARDAEDAV 64
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
R +DGY DG +LRVE G SG P + R AG R SRH
Sbjct: 65 RYKDGYELDGYKLRVEFPRG-SGVHPGYNQR------------NRMLAGRNGCRTNASRH 111
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+ +R + GLP+S SWQDLKDHMR+AGDVCF++ VY
Sbjct: 112 TGFRCYISGLPASGSWQDLKDHMREAGDVCFSD----------------------VYKNG 149
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 218
GVV+Y ED++YA+ L+++ FR+ + +K
Sbjct: 150 NGVVEYMRAEDLEYALANLNESRFRSHEYTVNVNIK 185
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 115/200 (57%), Gaps = 35/200 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAED + GRDGY
Sbjct: 70 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 129
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G RLRVE PS G GG G SR E RV+
Sbjct: 130 DYYGYRLRVEFP-------PSGRGTG------RGGSGGGGGGAPRGRYGPPSRRCENRVV 176
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GV+++
Sbjct: 177 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVMEF 214
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 215 VRKEDMTYAVRKLDNTKFRS 234
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 116/207 (56%), Gaps = 38/207 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+VGNLP D+RE E++++FYK+GRI I++K P RPP + F+EF++ R AE+A R R+
Sbjct: 10 RAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRRN 69
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
Y F G R+RVE+A GG G G S R GY I +R
Sbjct: 70 NYEFAGMRMRVEIARGGEGSG-SQQPLRIGYR-------------------PIRNTLGFR 109
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+ V+GLP SASWQDLKD +R+ + E+ +D GVV
Sbjct: 110 LYVKGLPRSASWQDLKDFVRRVCKPLYTEIFKDHR------------------DNVLGVV 151
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARG 213
++ + +DMK A+RKLDD+EF NP+ +G
Sbjct: 152 EFESKDDMKAALRKLDDSEFTNPFDKG 178
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 119/206 (57%), Gaps = 47/206 (22%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAI 62
R + IYVGNLP D + ++E+LF KYG I I+LK R P + FVEFE+ DA DA+
Sbjct: 3 RTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVEL R G G GGA G SR
Sbjct: 63 RGRDGYNFDGYALRVELP-------------RTGGFNRGGGGASGP-----------SRR 98
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S++RVIV GLP + SWQDLKDHMR+AGDV +A+V RD GT
Sbjct: 99 SDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---------------------GT 137
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDMKYAIR+LDD++FR+
Sbjct: 138 -GVVEFLRYEDMKYAIRRLDDSKFRS 162
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 116/200 (58%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYG I +IELK + FV FE+ RDAEDA+ GR+GY
Sbjct: 16 IYVGNLPNDVREKDLEDLFYKYGHISEIELKNRHGLVPFAFVRFEDPRDAEDAVYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRSGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLD+T+FR+
Sbjct: 153 LRKEDMEYALRKLDETKFRS 172
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 114/200 (57%), Gaps = 40/200 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP D++E ++EDLFYKYG+I +IELK + FV FE+ RDA+DA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFVRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ +LRVE Y G GG G +R SE+RVI
Sbjct: 66 GYGDSKLRVE------------------YPRSKPGPMGGGGGAPRGRFGPPTRRSEFRVI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVCFA+V RD E GVV++
Sbjct: 108 VSGLPPSGSWQDLKDHMREAGDVCFADVQRDGE----------------------GVVEF 145
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+R+LD TEFR+
Sbjct: 146 LRREDMEYALRRLDGTEFRS 165
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 115/206 (55%), Gaps = 51/206 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
IYVGNLP+DIRE E+EDLF +YGRI IELK P + F+ F++ RDAEDA+
Sbjct: 18 IYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAP----FAFISFQDPRDAEDAV 73
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
R+GY F CRLRVE G +GG G+ SR
Sbjct: 74 FARNGYEFGSCRLRVEFPRSFRG-------------------SGGGYGGSRGRNGPPSRR 114
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 115 SEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDG---------------------- 152
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V++ EDM+YA+RKLDDT+FR+
Sbjct: 153 MGIVEFIRKEDMEYALRKLDDTKFRS 178
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 112/206 (54%), Gaps = 38/206 (18%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
I+VGNLP D+RE E++++FYK+GRI I++K P RPP + FVEFE+ R AE+A R R+
Sbjct: 36 AIFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNN 95
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
Y F G R+RVE+A GG A GA G I +R+
Sbjct: 96 YEFAGMRMRVEIARGGE--------------------AAGAQQPLRIGYRPIRNTMGFRL 135
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V+ LP SASWQDLKD +R+ + EV +D+ GVV+
Sbjct: 136 YVKNLPRSASWQDLKDFVRRVCKPLYTEVFKDNR------------------DNVVGVVE 177
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARG 213
+ + EDMK +RKLDDTEF NP+ +G
Sbjct: 178 FESKEDMKATVRKLDDTEFANPFDKG 203
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 122/200 (61%), Gaps = 29/200 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR ++EDLFYK+G+I ++LK PP +CFVEFE+ RDA DA+ RDGY
Sbjct: 9 VYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPP-FCFVEFEDPRDASDAVHERDGY 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N+DG LRVE GG G S GGGG G G G SR SEYRV+
Sbjct: 68 NYDGYTLRVEFPRGGGPGGSRSR------GGGGGYGFRGGRGPPGGRGGPPSRRSEYRVL 121
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+ +V +D GT GVV++
Sbjct: 122 VSGLPPSGSWQDLKDHMREAGDVCYTDVYKD---------------------GT-GVVEF 159
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDMK+A+ KLDDT+FR+
Sbjct: 160 LRKEDMKHAVSKLDDTKFRS 179
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 122/206 (59%), Gaps = 29/206 (14%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR-PPCYCFVEFENARDAEDAI 62
R + IYVGNLP D + ++E+LF KYG I I+LK R P + FVEFE+ DA DA+
Sbjct: 3 RTTHKIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAV 62
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
RGRDGYNFDG LRVEL GS + + GG GG G+ SR
Sbjct: 63 RGRDGYNFDGYALRVELPRTGSYNNGNGGPNNNQFRRGGFNRGGGGGSSGP------SRR 116
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S++RVIV GLP + SWQDLKDHMR+AGDV +A+V RD GT
Sbjct: 117 SDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---------------------GT 155
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDMKYAIR+LDD++FR+
Sbjct: 156 -GVVEFLRYEDMKYAIRRLDDSKFRS 180
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 114/200 (57%), Gaps = 43/200 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI ++ELK + FV E+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 VSGLPPSGSWQDLKDHMREAGDVCYADVRKDG----------------------VGMVEY 152
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKL DT+F +
Sbjct: 153 LRKEDMEYALRKLHDTKFHS 172
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 111/199 (55%), Gaps = 41/199 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DI EV+D+FYKYG + D++LK + FVEF + RDA +A+ GRDGY
Sbjct: 17 IYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDGY 76
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+++G RLRVE + R YGGG G R SR S+ RV+
Sbjct: 77 DYEGYRLRVEFPR----------NYRAIYGGG---------RGLLETRGTSSRRSDNRVL 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AG VC+A V RD GVV++
Sbjct: 118 VSGLPPSGSWQDLKDHMREAGYVCYAAVRRDGS----------------------GVVEF 155
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKL++T+FR
Sbjct: 156 VWKEDMSYAVRKLNNTKFR 174
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 114/200 (57%), Gaps = 48/200 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 V-----SGSWQDLKDHMREAGDVCYADVQKDG----------------------VGMVEY 147
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 148 LRKEDMEYALRKLDDTKFRS 167
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 112/203 (55%), Gaps = 49/203 (24%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+ +YVGNLP+D+R+ EVED+F+KYGRI I++K R P + F+EFE+ RDAEDA+R R
Sbjct: 7 DQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVK-SGRGPAFAFIEFEDNRDAEDAVRAR 65
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DGY FDG R+RVE G RGP + R A
Sbjct: 66 DGYEFDGRRIRVEFTRGVGPRGPVAQSTRKEVATVEAVTI-------------------- 105
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ +DLKDHMR+AGDVC+A+V+RD GT GV
Sbjct: 106 ------VEDVVVVKDLKDHMREAGDVCYADVARD---------------------GT-GV 137
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++T +D+KYAIRKLDDT+FR+
Sbjct: 138 VEFTRYDDVKYAIRKLDDTKFRS 160
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 114/200 (57%), Gaps = 48/200 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE P + G G G +R S++RV+
Sbjct: 76 DYGQCRLRVEF--------PRTY-------------GGRGGWPRGGRNGPPTRRSDFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 115 V-----SGSWQDLKDHMREAGDVCYADVQKDG----------------------VGMVEY 147
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 148 LRKEDMEYALRKLDDTKFRS 167
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 104/200 (52%), Gaps = 69/200 (34%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G
Sbjct: 78 DYDGYRLRVEFPRSGR-------------------------------------------- 93
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
LP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 94 ---LPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 128
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
EDM YA+RKLD+T+FR+
Sbjct: 129 VRKEDMTYAVRKLDNTKFRS 148
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 110/198 (55%), Gaps = 53/198 (26%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
SR +YVGNLP DIRE E+++LFYKYGRILDI +K P Y FV FE+ RDAEDA+ GR
Sbjct: 5 SRRVYVGNLPRDIRERELDELFYKYGRILDIHIKGP-----YAFVTFEDERDAEDAVHGR 59
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG NF G RLRVEL++ G RG + D G +HSE+
Sbjct: 60 DGINFAGGRLRVELSNPGR-RGANPRDNFSG------------------------KHSEF 94
Query: 126 RVIVRGLPSSASWQDLKDHMRKA-GDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
RV+++GLP +ASWQD+KD + DV F +V+RD G
Sbjct: 95 RVLIKGLPRTASWQDVKDFFKDERLDVVFTDVNRDG----------------------VG 132
Query: 185 VVDYTNPEDMKYAIRKLD 202
+ ++ N EDM +A+ K++
Sbjct: 133 MAEFGNQEDMNFALDKMN 150
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 105/184 (57%), Gaps = 43/184 (23%)
Query: 25 DLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGS 84
DLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY++ CRLRVE
Sbjct: 1 DLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEF----- 55
Query: 85 GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDH 144
P + RGG+ G G +R S++RV+V GLP S SWQDLKDH
Sbjct: 56 ---PRTYGGRGGWPRGARNGPP-------------TRRSDFRVLVSGLPPSGSWQDLKDH 99
Query: 145 MRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDT 204
MR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT
Sbjct: 100 MREAGDVCYADVQKDG----------------------MGMVEYLRKEDMEYALRKLDDT 137
Query: 205 EFRN 208
+FR+
Sbjct: 138 KFRS 141
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 74/98 (75%), Gaps = 19/98 (19%)
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG T+G+VD
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG-------------------TFGIVD 41
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPS 225
YTN +DMKYAIRKLDDTEFRNPWAR I VK+YD SP+
Sbjct: 42 YTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDGSPT 79
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 119/216 (55%), Gaps = 53/216 (24%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R IYVGNLP DIRE E++DLFYK+GRI +I +K P Y FV FE++RDAEDA+R RD
Sbjct: 4 RRIYVGNLPYDIREREIDDLFYKFGRIEEITIKGP-----YAFVSFEDSRDAEDAVRRRD 58
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY F G RLRVE A+GG RR GA A G +HSE+R
Sbjct: 59 GYEFGGGRLRVEFANGG---------RR----------ERGARAFNG-------QHSEFR 92
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+ V LP +ASWQD+KD R+AG+V FAEV D GT G+V
Sbjct: 93 LRVSNLPRTASWQDVKDFCREAGEVLFAEVFHD---------------------GT-GLV 130
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 222
++ +DM++A+R L++ + R+ I DR
Sbjct: 131 EFRREDDMEWALRNLNERKLRSHLGDSDIVTLVEDR 166
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 138/262 (52%), Gaps = 53/262 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +++DLFYK+G++ ++LK PP + FVEFE+ RDA+DA+ RDGY
Sbjct: 10 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFEDPRDADDAVHARDGY 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE P GG G G G + G A R S++RV+
Sbjct: 69 DYDGYRLRVEF--------PRGGGHGSFRGGRGGGDRGRSSRGPPA------RRSQFRVL 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVCFA+ +D G VV++
Sbjct: 115 VTGLPPSGSWQDLKDHMREAGDVCFADAFKDGSG----------------------VVEF 152
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSK 248
EDMKYAI+KLDD+ FR+ G ++ R R RR+ +
Sbjct: 153 LRYEDMKYAIKKLDDSRFRS--HEGEVSYIRV--------------KEDRGGSDRRSGGR 196
Query: 249 SLERSVSRSVSRSMSASPVKSS 270
S RS S S + SPVK S
Sbjct: 197 SRSRSYSPRRRGSPTYSPVKRS 218
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 98/170 (57%), Gaps = 38/170 (22%)
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
I GRDGY+FDGCRLRVE+AHGG PS + + + SR
Sbjct: 1 IYGRDGYDFDGCRLRVEIAHGGRRFSPSVD----------------RYSSSYSASRAPSR 44
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
S+Y V+V GLP SASWQDLKDHMRKAGDVCF+EV D +G
Sbjct: 45 RSDYHVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMS----------------- 87
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVVDY+N +DMKYAIRKLD TEFRN ++ I V+ Y+ SRS SRS
Sbjct: 88 --GVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIRVREYE---SRSVSRS 132
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 116/200 (58%), Gaps = 32/200 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP DIR+ ++ED+FYKYG+++D++L P + F+EFE+ RDA+DAIRGRDGY
Sbjct: 11 VYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETP-FAFIEFEDPRDADDAIRGRDGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
FDG +LRVEL GY GGG G G G +G ++++
Sbjct: 70 MFDGYKLRVELPRSSPRYVGGRGGGGRGYYGGGRRDGYGRGGGRQSG---------HKLM 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ GLP + SWQD+KDH R+AGDV +A V RD GT GVV++
Sbjct: 121 ITGLPPTGSWQDIKDHFRQAGDVIYANVERD---------------------GT-GVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
E K A+R LDD++FR+
Sbjct: 159 ARYEHAKRAVRDLDDSKFRS 178
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 124/234 (52%), Gaps = 36/234 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E + RR G GG GG +G +G R SE+RV
Sbjct: 82 AHLGFHRIRIERSR--------QRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V GLP +ASWQDLKDHMR+AGDV +A + G GVV+
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI-----------------------EGGVGVVE 170
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKR---YDRSPSRSR-SRSRSRSRS 237
Y+N +DM YA+RKL + FRN + +I V+R D PSR R S R R R
Sbjct: 171 YSNGDDMDYALRKLHGSVFRNIFHTAKIRVERDLGDDYVPSRRRPSLGRERDRQ 224
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 122/234 (52%), Gaps = 36/234 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E R R G + G G G G +G R SE+RV
Sbjct: 82 AHLGFHRIRIE-------RSRQRLRRPGEFRRDRGGYGGRESGGNGPA-YGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V GLP +ASWQDLKDHMR+AGDV +A + G GVV+
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI-----------------------EGGVGVVE 170
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKR---YDRSPSRSR-SRSRSRSRS 237
Y+N +DM YA+RKL + FRN + +I V+R D PSR R S R R R
Sbjct: 171 YSNGDDMDYALRKLHGSVFRNIFHTAKIRVERDLGDDYVPSRRRPSLGRERDRQ 224
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 124/234 (52%), Gaps = 36/234 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E + RR G GG GG +G +G R SE+RV
Sbjct: 82 AHLGFHRIRIERSR--------QRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V GLP +ASWQDLKDHMR+AGDV +A + G GVV+
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI-----------------------EGGVGVVE 170
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKR---YDRSPSRSR-SRSRSRSRS 237
Y+N +DM YA+RKL + FRN + +I V+R D PSR R S R R R
Sbjct: 171 YSNGDDMDYALRKLHGSVFRNIFHTAKIRVERDLGDDYVPSRRRPSLGRERDRQ 224
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 113/212 (53%), Gaps = 32/212 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIE++ FV+F + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ R+R+E R R G + G G G G +G R SE+RV
Sbjct: 82 AHLGFHRIRIE-------RSRQRLRRPGEFRRDRGGYGGRESGGNGPA-YGPPRRSEFRV 133
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V GLP +ASWQDLKDHMR+AGDV +A + G GVV+
Sbjct: 134 RVYGLPPTASWQDLKDHMRRAGDVGYANI-----------------------EGGVGVVE 170
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
Y+N +DM YA+RKL + FRN + +I V+R
Sbjct: 171 YSNGDDMDYALRKLHGSVFRNIFHTAKIRVER 202
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 112/236 (47%), Gaps = 42/236 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + + ++ ++F KYG I DI++K Y F+EFE+ R AEDA+ RD
Sbjct: 15 VFVGNLPEKVDDRDIHEIFDKYGEIRDIDIKHGKTSNYTSYAFIEFESVRSAEDAVECRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FD RLRVE A G S R Y G+ R+ ++YR
Sbjct: 75 GYEFDRYRLRVEFA----GEKKSRRHPRSSYEDRGS-------------RYPPPTRTDYR 117
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+++ LP WQ LKDHMRKAG V + + G V
Sbjct: 118 LVISNLPHGCRWQHLKDHMRKAGPVGYVNIQHGR-----------------------GYV 154
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIV 242
D+ + DMKYA+RKLD TE RI +K+ D SRSR R RS SR R
Sbjct: 155 DFMHKSDMKYALRKLDGTELSTSEDSARIRIKKDDYRRSRSRDAYRRRSHSRGRYA 210
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 103/195 (52%), Gaps = 40/195 (20%)
Query: 11 VGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR-DGYN 69
VGNLP DIR +VEDLFYKYGR+ P PP + FV FE DAEDA+RGR DG
Sbjct: 5 VGNLPLDIRTRDVEDLFYKYGRL-------PTIPPAFAFVSFEYPEDAEDAVRGRADGVM 57
Query: 70 FDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH---SEYR 126
F+G RLRVE++ SS D +GG G G + AG R S++R
Sbjct: 58 FEGQRLRVEMSR-------SSQDGYVEWGGSWVGKEEDGGRASQAGNRAPPRDLRRSDHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+I+ GLP SASWQDLKD R AG+V F++V R G+V
Sbjct: 111 IIISGLPPSASWQDLKDFFRSAGEVIFSDVDRQGG----------------------GIV 148
Query: 187 DYTNPEDMKYAIRKL 201
++ N D +YAI K+
Sbjct: 149 EFANKSDQEYAISKV 163
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 111/212 (52%), Gaps = 32/212 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIP-PRPPCYCFVEFENARDAEDAIRGRDG 67
I+V NLP D+ E E+EDLFYK+GRI DIEL+ FV+F + + A++AI GRDG
Sbjct: 23 IFVANLPLDVTENELEDLFYKFGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEGRDG 82
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
R+R+E + RR G G G G +G R SE+RV
Sbjct: 83 TRLGFHRIRIERSR--------QRLRRPGEFGRSDRSGYGREGGGSGPAYGPPRRSEFRV 134
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V GLP +ASWQDLKDHMR+AGDV +A + G GVV+
Sbjct: 135 RVYGLPPTASWQDLKDHMRRAGDVGYANI-----------------------DGGVGVVE 171
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
Y+N DM YA+RKL + FRN + +I V+R
Sbjct: 172 YSNGSDMDYALRKLHGSVFRNIFHTAKIRVER 203
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 99/170 (58%), Gaps = 34/170 (20%)
Query: 39 KIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYG 98
+I R F+EF++ RDA DA+RGRDGY+FDGCRLRVEL G RGP
Sbjct: 6 QIHTRRTILSFIEFDDPRDARDAVRGRDGYSFDGCRLRVELTRGVGPRGPGGR------- 58
Query: 99 GGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSR 158
A + R R S YRV++ GLP+S SWQDLKDHMR+AGD+C+AEVS+
Sbjct: 59 -----PLYAAEQMSPRRRAPPPRRSGYRVVISGLPASGSWQDLKDHMREAGDICYAEVSK 113
Query: 159 DSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
D GT GVV+Y N +DMKYA+RKLDDT+F++
Sbjct: 114 D---------------------GT-GVVEYINYDDMKYAVRKLDDTKFKS 141
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 134/254 (52%), Gaps = 53/254 (20%)
Query: 49 FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA 108
F + E+ RDA DA+ GRDGY+FDGCR+RVEL G RGP YG G
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGR---PLYGPDPRSPRRGP 57
Query: 109 GAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAM 168
S YRVIV GLP + SWQDLKDHMR AG++C+A+V RD
Sbjct: 58 PPRR----------SGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD--------- 98
Query: 169 ILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR----SP 224
GT GVV+YTN EDMKYA+RKLDDT+F++ G +T R SP
Sbjct: 99 ------------GT-GVVEYTNYEDMKYALRKLDDTKFKS--HEGEVTYIRVKEANINSP 143
Query: 225 SRSRSRSRSRSRSRS----------RIVRRNRSKSLERSVSRSVSRSMSASPVKSSRARS 274
+RSRSRS + ++RS R S+S S + V R S SPV SS +RS
Sbjct: 144 NRSRSRSHTPRKTRSSPKYSPTRSPSKSRSRSSRSRSHSRTSFVRR--STSPVHSSNSRS 201
Query: 275 RSRSVSPDKVRSGS 288
S++ S + RSGS
Sbjct: 202 PSKTRSKTRSRSGS 215
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 101/170 (59%), Gaps = 26/170 (15%)
Query: 39 KIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYG 98
K+ P+ ++RDAEDA+ RDGY++DG RLRVE GG GPS++ RGG G
Sbjct: 54 KLEPKSKAPIISLQNDSRDAEDAVHARDGYDYDGYRLRVEFPRGG---GPSNN-FRGGRG 109
Query: 99 GGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSR 158
G +G G GR +R S+YRV+V GLP + SWQDLKDHMR+AGDVCFA+V +
Sbjct: 110 AGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVYK 169
Query: 159 DSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
D GT GVV++ +DMKYA++KLDD+ FR+
Sbjct: 170 D---------------------GT-GVVEFLRHDDMKYAVKKLDDSRFRS 197
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 108/214 (50%), Gaps = 59/214 (27%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPR--PPCYCFVEFENARDAEDAIRGRD 66
IYV NLP DI E+E++D FYK+GRI I +K R CY ++EF+++ +DAI+ RD
Sbjct: 8 IYVANLPPDITEHELDDKFYKFGRIRQITIKQSRRRDDECYAYIEFDSSSSVDDAIKYRD 67
Query: 67 GYNFDGCRLRVELAH---GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
GY F R+ V++ G S RGP +
Sbjct: 68 GYKFGRYRIFVDILREKGGKSSRGPPM-------------------------------RT 96
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
+YRVIV LPSSASWQDLKDHMRKAG V ++ V+R
Sbjct: 97 DYRVIVDNLPSSASWQDLKDHMRKAGPVGYSSVNRGK----------------------- 133
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
G V+Y +DM++A+ LD +EF+N +++ I V
Sbjct: 134 GYVEYETKKDMEWALENLDKSEFKNIYSKSIIRV 167
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 121/235 (51%), Gaps = 47/235 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
I+VGNLP DI E+E++F K+G I DI++K Y F+EF + RDAEDA+ RD
Sbjct: 16 IFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAEDAVESRD 75
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GYNFD RLRVE + G R + D+ Y + +R +E+R
Sbjct: 76 GYNFDKYRLRVEFS--GRKRSGNQGDKLRRYND-----------------YSNTR-TEHR 115
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+++ + SS WQD+KDHM++AG V +C+ G G V
Sbjct: 116 LVISNISSSCRWQDIKDHMKRAGPV----------------------GHVCIKDGR-GYV 152
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-RSPSRSRSRSRSRSRSRSR 240
+Y N DMKYA+ K D +E ++ RI V+ D RS S S RSR RS S+++
Sbjct: 153 EYINKSDMKYALEKYDGSELQSAGRSYRIKVRMDDHRSHSHSNERSR-RSASQNK 206
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 77/137 (56%), Gaps = 17/137 (12%)
Query: 28 YKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 87
Y+YGRILDI+LKIPPRPP Y VEFE+ DA+DAI GRD YNFDG RL + +A
Sbjct: 269 YQYGRILDIDLKIPPRPPRYAVVEFEDPHDADDAIYGRDEYNFDGYRLLLIVAEASLILM 328
Query: 88 PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRK 147
A A + V+V GLPSS SWQDLKDHMR+
Sbjct: 329 IVQ-----------------AAISVHAVEVFLGALISMVVMVTGLPSSVSWQDLKDHMRR 371
Query: 148 AGDVCFAEVSRDSEGWQ 164
AGDVCF++V R+ W
Sbjct: 372 AGDVCFSDVYREVGEWM 388
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 113/219 (51%), Gaps = 26/219 (11%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
TI+VGNLP DIRE E++DLFYKYGRI+ I++ PP + F+EFE+ RDAEDA RDG
Sbjct: 16 TIFVGNLPLDIRERELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDG 75
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAG---------AGRFG 118
Y FDG RLRVE++ G SG G R GG G GG G+ G F
Sbjct: 76 YEFDGNRLRVEISKGSSGGGGFGGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFE 135
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCV 178
R +E+ V+VR LP ASWQDLKD R++G V +A DS +
Sbjct: 136 RPRRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFIDSNTGEQ------------- 182
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
G VD+ D + A D EF N + +I
Sbjct: 183 ----IGEVDFEYLTDAENACDDCDGIEFENRFGVSKIQC 217
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 113/202 (55%), Gaps = 37/202 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRI--LDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+YVGNLP ++ ++EDLF KYG I +DI + P + F+EFE+ RDA DA+ G+D
Sbjct: 14 VYVGNLPQFVKNRDIEDLFDKYGPIKAIDIHNRFDP---AFAFLEFEDPRDASDAVYGKD 70
Query: 67 GYNFDGCRLRVELA-HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G F+G R+RV+ + +GR + S GGG G G R SE
Sbjct: 71 GERFEGQRIRVQFPRNSAAGRERTESGSNNNGGGGYVRGRGRGPP---------IRRSEN 121
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RV+V GLP + SWQDLKDHMR+AG+V +A+V +D GT V
Sbjct: 122 RVLVSGLPPTGSWQDLKDHMREAGEVLYADVYKD---------------------GT-AV 159
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
++ N EDMK+A++ LDD++F+
Sbjct: 160 CEFANYEDMKWAVKYLDDSKFK 181
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 102/199 (51%), Gaps = 53/199 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR K P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIR------------------TKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 60 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++
Sbjct: 107 VSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GVVEF 144
Query: 189 TNPEDMKYAIRKLDDTEFR 207
EDM YA+RKLD+T+FR
Sbjct: 145 VRKEDMTYAVRKLDNTKFR 163
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 54/198 (27%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE E+ D F +YGRI + +K P RPP + F+ +EN +DA DA+R +
Sbjct: 4 VFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNNT 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+RVE++ G P R ++YRV
Sbjct: 64 TFGGSRIRVEMSRGIDDARP--------------------------------RGTQYRVK 91
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ GLP + SWQDLKD +RK GDV ++V R G S +
Sbjct: 92 ISGLPDTMSWQDLKDFLRKGGDVVHSDVDRRGNGSAS----------------------F 129
Query: 189 TNPEDMKYAIRKLDDTEF 206
P++M AIRKLD T+
Sbjct: 130 ATPDEMLRAIRKLDGTDL 147
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 90/198 (45%), Gaps = 71/198 (35%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYV LP+D+RE ++ED FYKY RI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 8 IYVVGLPTDVREKDLEDFFYKYDRIHEIELKNWHGLVPFAFVHFEDPRDAEDAIYGRNGY 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ CRLRVE GRG
Sbjct: 68 DYGQCRLRVEFPRTYGGRG----------------------------------------- 86
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
SWQDLKDHMR DVC+A V +D G+V+Y
Sbjct: 87 --------SWQDLKDHMRAVWDVCYAHVQKDG----------------------VGMVEY 116
Query: 189 TNPEDMKYAIRKLDDTEF 206
DM+YA+RKLDD +F
Sbjct: 117 LRKADMEYALRKLDDIKF 134
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 102/207 (49%), Gaps = 47/207 (22%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC---YCFVEFENARDAED 60
R S IYVGNLP ++ E EV DLF KYGRI I++K P P + FV + ++RDAE
Sbjct: 10 RISSCIYVGNLPGNVVEDEVYDLFSKYGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEY 69
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI RDGY +DG RLRVE + G R G Y G G
Sbjct: 70 AIDRRDGYKYDGVRLRVEYS--GENRS------YGKYRNKEEG-------------TGPP 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+E+R+I+ LP S WQ LKD MR+ GDV +A V R
Sbjct: 109 VRTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANVERGK-------------------- 148
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ + +DM YAI K D +EF+
Sbjct: 149 ---GVVEFISRDDMLYAIEKFDGSEFK 172
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 107/204 (52%), Gaps = 53/204 (25%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE R G G G GG GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFP-------------RSGRGAGRGGGGGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V +GDVC+A+V RD GT GVV++
Sbjct: 125 V------------------SGDVCYADVYRD---------------------GT-GVVEF 144
Query: 189 TNPEDMKYAIRKLDDTEFRNPWAR 212
EDM YA+RKLD+T+FR+ A
Sbjct: 145 VRKEDMTYAVRKLDNTKFRSHEAH 168
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + E ++ DLF K+G I D+++K Y F+EF + R AEDA+ RD
Sbjct: 15 VFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY +D RLRVE A R S DR + R+ ++YR
Sbjct: 75 GYEYDRYRLRVEFAGEKKPRRYPSYDR--------------PRDRDRSNRYPPPTRTDYR 120
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+++ LP WQ LKDHMRKAG V + + G V
Sbjct: 121 LVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK-----------------------GFV 157
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
DY + DMKYAIRKLD +E P RI VK+
Sbjct: 158 DYMHKSDMKYAIRKLDGSELTTPDDSCRIRVKK 190
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 102/208 (49%), Gaps = 47/208 (22%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC---YCFVEFENARDAE 59
R S IYVGNLP ++ E EV DLF K+GRI I++K P P + FV + ++RDAE
Sbjct: 9 NRISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAE 68
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
AI RDGY +DG RLRVE SG S YG G G
Sbjct: 69 YAIDRRDGYKYDGVRLRVEY----SGENKS-------YGKYRKKEEGA----------GP 107
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
+E+R+I+ LP S WQ LKD MR+ GDV +A + R
Sbjct: 108 PVRTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANIER--------------------- 146
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ + +DM YAI K D +EF+
Sbjct: 147 --GRGVVEFISRDDMLYAIEKFDGSEFK 172
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 108/212 (50%), Gaps = 40/212 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G +S RG G G SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK-----------------SRRGRYVVE 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDH+R+AG+ A+V ++ GT G V +
Sbjct: 113 VSGLPLSGSWQDLKDHLREAGECGHADVFKN---------------------GT-GEVSF 150
Query: 189 TNPEDMKYAIRKLDDTEFR-NPWARGRITVKR 219
+ EDM AI K + + FR + + +IT+++
Sbjct: 151 FHKEDMLEAIEKFNGSTFRSHEGEKAKITIRQ 182
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 46/198 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGNLP +I E E+E F ++G+I+++ LK P RPP + F+E+E+ RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G +RVE+ S GP +S R +GG G +++RV
Sbjct: 87 ELHGAEIRVEI----SRNGPKAS-RDEKFGGRHHG-------------------TQFRVE 122
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ +P S SWQDLKD +R G V A+V R GV +
Sbjct: 123 LSNIPRSVSWQDLKDFLRIGGVVVHADVDRRGN----------------------GVASF 160
Query: 189 TNPEDMKYAIRKLDDTEF 206
TN ++M+ AIRKL D +
Sbjct: 161 TNQQEMERAIRKLKDAKL 178
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 53/198 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE ++ D F ++GRI + +K P RPP + F+ ++N DA DA+R G
Sbjct: 4 VFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHGA 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
GCRLRVE++ G D R R ++YRV
Sbjct: 64 MLSGCRLRVEMSRG------LVDDAR-------------------------PRGTQYRVK 92
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ GLP++ SWQDLKD +RK GDV ++V R G S +
Sbjct: 93 ISGLPATMSWQDLKDFLRKGGDVVHSDVDRRGNGTAS----------------------F 130
Query: 189 TNPEDMKYAIRKLDDTEF 206
++M+ AIR+LD T+
Sbjct: 131 ATSDEMRRAIRQLDGTDL 148
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 46/198 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGNLP +I E E+E F ++G+I+++ LK P RPP + F+E+E+ RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G +RVE+ S GP +S R +GG G +++RV
Sbjct: 87 ELHGAEIRVEI----SRNGPKAS-RDEKFGGRHHG-------------------TQFRVE 122
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ +P S SWQDLKD +R G V A+V R GV +
Sbjct: 123 LSNIPRSVSWQDLKDFLRIGGVVVHADVDRRGN----------------------GVASF 160
Query: 189 TNPEDMKYAIRKLDDTEF 206
TN ++M+ AIRKL D +
Sbjct: 161 TNQQEMERAIRKLKDAKL 178
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNLP D+RE EVEDLF+KYGRI ++LKI PRPP + FVEFE+ RDA DA+RGRDG
Sbjct: 6 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGI 65
Query: 69 NFDGCRLRVELAHG 82
F G RLRVE++HG
Sbjct: 66 EFQGQRLRVEVSHG 79
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 66/146 (45%)
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
G FG SR +++RVIV LP S SWQDLKDHMR+AG+V F++V RD G
Sbjct: 157 GPNPFGPSRRTDFRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGM--------- 207
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPW---------------------- 210
G++DY D++ A+RKLDD+EF+NP+
Sbjct: 208 ----------LGLIDYATRSDLELALRKLDDSEFKNPYDTARIRVREDRGDGPAGVSGGG 257
Query: 211 -------------------------A 211
+
Sbjct: 258 SRGRRSRSRSKSRSKSRSRSRSKSRS 283
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 105/212 (49%), Gaps = 49/212 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D + E+E+ F K+GRI+ +LK + F+EF ++RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGCRLRVELA--HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
F G +LRVEL + R PSS R+G +R +Y
Sbjct: 69 EFHGKKLRVELPFRYRDEPRRPSSR------------------------RYGTTRRGKYV 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+ V GLP + SWQDLKDHMR AG+ A+V R G G +
Sbjct: 105 LEVTGLPPTGSWQDLKDHMRDAGECGHADVFR----------------------GGVGEI 142
Query: 187 DYTNPEDMKYAIRKLDDTEFR-NPWARGRITV 217
+ + DM YAI + D + FR + + RI+V
Sbjct: 143 TFFSRSDMDYAIERFDGSTFRSHEGEKSRISV 174
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + E +++DLF K+G I DI++K Y F+EF + R AEDA+ RD
Sbjct: 15 VFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY +D RLRVE A R S +R + R+ ++YR
Sbjct: 75 GYEYDRYRLRVEFAGEKRPRRYPSYER--------------PRDRDRSNRYPPPTRTDYR 120
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+++ LP WQ LKDHMRKAG V + + G V
Sbjct: 121 LVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK-----------------------GFV 157
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKR 219
D+ + DMKYAIRKLD +E P RI VK+
Sbjct: 158 DFLHKSDMKYAIRKLDGSELSTPDDSCRIRVKK 190
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 107/228 (46%), Gaps = 48/228 (21%)
Query: 2 SGRFSRT--IYVGNLPSDIREYEVEDLFYKYGRI--LDIELKIPPRPPCYCFVEFENARD 57
S R++RT IYVGNLP ++ E EV DLF K+GRI +DI+L Y FV + + +D
Sbjct: 5 SSRYNRTSCIYVGNLPGNVLEDEVYDLFGKFGRIKYIDIKLTRGSSSTAYAFVHYYDIKD 64
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
AE AI RDGY FDG RLRVE SG S R G
Sbjct: 65 AEYAIERRDGYKFDGERLRVEF----SGENKSFGKYRRKEDG-----------------I 103
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
G +E+R+IV LP + WQ LKD MR+ GDV +A +
Sbjct: 104 GPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK----------------- 146
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPS 225
G+V++ + + M YAI K D EF+ I V+R RS S
Sbjct: 147 ------GIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLS 188
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 88/161 (54%), Gaps = 17/161 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G SS RG G G SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYSSRGRGMMGRGSK-----------------SRRGRYVVE 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMI 169
V GLP S SWQDLKDH+R+AG+ A+V ++ G ++ I
Sbjct: 113 VSGLPLSGSWQDLKDHLREAGECGHADVFKNGTGEKAKITI 153
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 88/161 (54%), Gaps = 17/161 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G +S RG G G SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRGSK-----------------SRRGRYVVE 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMI 169
V GLP S SWQDLKDH+R+AG+ A+V ++ G ++ I
Sbjct: 113 VSGLPLSGSWQDLKDHLREAGECGHADVFKNGTGEKAKITI 153
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 102/198 (51%), Gaps = 26/198 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +V+ F YGR+ DI LK + FVEFE+ RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELAHG S RGP G + GG RFG + Y+++
Sbjct: 60 ELLGERVSVELAHG-SRRGPGGRIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRTNYQLV 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V F + + G+V++
Sbjct: 119 VENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRP--------------------NQGIVEF 158
Query: 189 TNPEDMKYAIRKLDDTEF 206
+N DM+ A+ KLD+T+
Sbjct: 159 SNYADMRNALNKLDNTDL 176
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 97/202 (48%), Gaps = 77/202 (38%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV------ 71
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
GR G + YR+
Sbjct: 72 ---------------------------------------------YGRDGYD-YDGYRLR 85
Query: 129 V---RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
V R LP S SWQDLKDHMR+AGDVC+A+V RD GT GV
Sbjct: 86 VEFPRRLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT-GV 123
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
V++ EDM YA+RKLD+T+FR
Sbjct: 124 VEFVRKEDMTYAVRKLDNTKFR 145
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 118/238 (49%), Gaps = 62/238 (26%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAI 62
IYV NL K GRI +IELK +P + FV F++ RDAEDAI
Sbjct: 65 CIYVANLRQTCSRRTC-----KCGRICEIELKNRHGLVP-----FAFVRFKDPRDAEDAI 114
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
GR+GY++ CRLRVE P + RGG GG GA G
Sbjct: 115 CGRNGYDYGQCRLRVEF--------PRTYGGRGGCPRGGRTGAPARG------------- 153
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
S++RV+V GLP S SWQDLKDH+ +AGDVC+A+V +D
Sbjct: 154 SDFRVLVSGLPPSGSWQDLKDHIPEAGDVCYADVQKDG---------------------- 191
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSR 240
G+V++ EDM YA+RKLDDT+FR+ G + R P R+ S S SRS SR
Sbjct: 192 MGMVEHLRKEDMDYALRKLDDTKFRS--HEGETSYIRV--YPERNTSYCYSWSRSGSR 245
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 100/208 (48%), Gaps = 48/208 (23%)
Query: 4 RFSRT---IYVGNLPSDIREYEVEDLFYKYGRILDIELK-IPPRPPCYCFVEFENARDAE 59
RFS++ IYVGNLP ++ E EV DLF KYGRI I++K Y FV + + +DA+
Sbjct: 6 RFSKSSSCIYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDAD 65
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
AI RDGY FDG RLRVE H G R G Y G G
Sbjct: 66 YAIERRDGYKFDGFRLRVE--HSGENRSF------GKYRKKDDG-------------VGP 104
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
+E RVIV LP + WQ LKD MR+ GDV +A + R
Sbjct: 105 PIRTENRVIVTNLPDNCRWQHLKDIMRQCGDVGYANIERGK------------------- 145
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G+V++ + +DM YAI K D EF+
Sbjct: 146 ----GIVEFVSYDDMLYAIEKFDGAEFK 169
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 43/162 (26%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ FV FE RDAEDAI GR+GY++ CRLRVE G
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFPRAY---------------------GG 45
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
G G +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 46 RGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG------ 99
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 100 ----------------MGMVEYLRKEDMEYALRKLDDTKFRS 125
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 101/219 (46%), Gaps = 46/219 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRI--LDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
IYVGNLP ++ E EV DLF KYGRI +DI+L Y FV + + +DAE AI RD
Sbjct: 13 IYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYDIKDAEYAIERRD 72
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY FDG RLRVE SG S R G G +E+R
Sbjct: 73 GYKFDGERLRVEF----SGENKSFGKYRRKEDG-----------------IGPPLRTEHR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV LP + WQ LKD MR+ GDV +A + G+V
Sbjct: 112 IIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK-----------------------GIV 148
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPS 225
++ + + M YAI K D EF+ I V+R RS S
Sbjct: 149 EFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVRRDKRSLS 187
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 101/197 (51%), Gaps = 48/197 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++V NLP D+RE E++D F +YG ++D+ LK+ P Y FVEFE AE+A++G++G
Sbjct: 5 VFVANLPKDVRESELKDEFSRYGTVIDVTLKLTGHTP-YGFVEFEEESAAEEAVKGKNGS 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G LRVE+A+G RGP G ++G H+ YRV
Sbjct: 64 VLGGLSLRVEVANG---RGP---------------------KGDRGSKYGPPVHTNYRVE 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V LP SWQDLKDHMRK GDV + C G G+V+Y
Sbjct: 100 VTHLPYHCSWQDLKDHMRKEGDVGY-----------------------CSVDGGVGIVEY 136
Query: 189 TNPEDMKYAIRKLDDTE 205
TN +DM AI+ LDD++
Sbjct: 137 TNYDDMMRAIKYLDDSK 153
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 40/198 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L +RE ++E F +G+I ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 4 VYVGHLSYRVRERDLERFFRGFGKIREVLLK-----NGFGFVEFDDYRDADDAVYELNGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
DG R+ VELAHG + R P A A +G R+G ++YRVI
Sbjct: 59 ELDGERVVVELAHGTARRPPPPR---------------SAWADSGTNRYGPPTRTDYRVI 103
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ L S SWQDLKD MR+ GDV +A+ R + GVV++
Sbjct: 104 IENLSSRISWQDLKDRMRQVGDVTYADAHR--------------------HRRNEGVVEF 143
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLD+TE
Sbjct: 144 ASYSDMKRAIEKLDNTEI 161
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 44/206 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +V+ F YGR+ DI LK + FVEFE+ RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLKN-----GFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS----- 123
G R+ VELAHG S RGP GG G + GRF R S
Sbjct: 60 ELLGERVSVELAHG-SRRGP----------GGRIVAPGSRDWRSPPGRFNAPRESRFGPP 108
Query: 124 ---EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
Y++IV L S SWQDLKD+MR+AG+V F + +
Sbjct: 109 VRTNYQLIVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRP------------------- 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEF 206
G+V+++N DM+ A+ KLD+T+
Sbjct: 150 -NQGIVEFSNYADMRNALNKLDNTDL 174
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 64/74 (86%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP D++E ++ED+FYKYG+I D++LK+P RPP + FV FE++RDA++A+R RDGY
Sbjct: 56 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGY 115
Query: 69 NFDGCRLRVELAHG 82
+FDG RLRVE++ G
Sbjct: 116 DFDGYRLRVEMSRG 129
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 104/212 (49%), Gaps = 39/212 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ G SS G GR SR Y V
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYSS----------------RGGRGMMGRGMKSRRGRYVVE 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDH+R+AG+ A+ V+ G V +
Sbjct: 114 VSGLPLSGSWQDLKDHLREAGECGHAD----------------------VFKNGLGEVSF 151
Query: 189 TNPEDMKYAIRKLDDTEFR-NPWARGRITVKR 219
+ EDM AI K + + FR + + +IT+++
Sbjct: 152 FHKEDMLEAIEKFNGSTFRSHEGEKSKITIRQ 183
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 148/318 (46%), Gaps = 76/318 (23%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR IYVG L +RE ++E F YGRI+D+ LK Y FVEF++ RDA+D
Sbjct: 1 MSGR----IYVGRLSYSVRERDIERFFRNYGRIVDVLLK-----NGYGFVEFDDYRDADD 51
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG----- 115
A+ +G G R+ +E A RGP+ D R G GG G G G
Sbjct: 52 AVYELNGKELCGERVVIEHA-----RGPNRKDDRDGGYRDRGDRGGGRGGGRQPGWMDKS 106
Query: 116 --RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTL 173
R+G +EYR++V L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 107 GSRYGPPARTEYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHK------------ 154
Query: 174 NFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWAR--------------------- 212
G+V++++ DMK A+ KLDDTE R
Sbjct: 155 --------NEGIVEFSSRADMKTALEKLDDTEINGRRIRLVEDRSRSRRRSHSRSHSRGR 206
Query: 213 -----------GRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVSRSVSRS 261
R RSP +SRS SR RS V R RSKS++RSVSR S+S
Sbjct: 207 YRSRSPRSRSRSRRRSVSRSRSPVHRNGKSRSLSRDRS--VSRGRSKSMDRSVSRDRSKS 264
Query: 262 MSASPVKSSRARSRSRSV 279
S V R++SR RSV
Sbjct: 265 RDRS-VSRDRSKSRDRSV 281
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 101/199 (50%), Gaps = 37/199 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F+G +LRVE+ P ++ G Y G G SR Y V
Sbjct: 70 DFEGNKLRVEV--------PFNARENGRYNARGGGRGMMHRGPK-------SRRGRYVVE 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDH+R+AG+ A+V +D GT G V +
Sbjct: 115 VTGLPISGSWQDLKDHLREAGECGHADVFKD---------------------GT-GEVSF 152
Query: 189 TNPEDMKYAIRKLDDTEFR 207
N +DM AI K + + FR
Sbjct: 153 FNKDDMLEAIDKFNGSIFR 171
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 43/152 (28%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
DAEDAI GR+GY++ CRLRVE GR AG GA
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------------------AGWPRGARN 82
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFL 176
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 83 GPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---------------- 126
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 127 ------MGMVEYLRKEDMEYALRKLDDTKFRS 152
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 85/161 (52%), Gaps = 43/161 (26%)
Query: 48 CFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG 107
FV FE+ RDAEDAI GR+GY++ CRLRVE G
Sbjct: 1 AFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGR 39
Query: 108 AGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPA 167
G G +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 40 GGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG------- 92
Query: 168 MILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 93 ---------------VGMVEYLRKEDMEYALRKLDDTKFRS 118
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 42/152 (27%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSG-RGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
DA+DA+R R+GYNFDG +L+VE SG +G S+ RG G
Sbjct: 1 DADDAVRARNGYNFDGYKLKVERPRSSSGFQGRPSNYIRGRPGP---------------- 44
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
S+ +EYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 45 ---PSKRTEYRVIVEGLPGSGSWQDLKDHMREAGDVCYADVYRDGS-------------- 87
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ N EDMK+A++ +DDT+FR
Sbjct: 88 --------GVVEFVNKEDMKFALKHMDDTKFR 111
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 107/211 (50%), Gaps = 39/211 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G +LRVE+ P ++ G Y G G G G + GR Y V
Sbjct: 70 DFGGNKLRVEV--------PFNARDNGKYNSRGGRGMMGRGMKSRRGR--------YVVE 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDH+R+AG+ A+ V+ G V +
Sbjct: 114 VSGLPLSGSWQDLKDHLREAGECGHAD----------------------VFKNGLGEVSF 151
Query: 189 TNPEDMKYAIRKLDDTEFR-NPWARGRITVK 218
+ EDM AI K + + FR + + +IT++
Sbjct: 152 FHKEDMLEAIEKFNGSTFRSHEGEKSKITIR 182
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE--------------------GVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 87/155 (56%), Gaps = 35/155 (22%)
Query: 54 NARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAG 113
RDAEDA+ GRDGY++DG RLRVE G G G GG GG G
Sbjct: 20 QPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRG-------------TGRGGGGGGGGGAPR 66
Query: 114 AGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTL 173
SR SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 67 GRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD-------------- 112
Query: 174 NFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ EDM YA+RKLD+T+FR+
Sbjct: 113 -------GT-GVVEFVRKEDMTYAVRKLDNTKFRS 139
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 36/202 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L +RE +++ F YG++L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYVGRLGYHVREKDIQRFFGSYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAG----AGAGAGRFGISRHSE 124
+ G R+ VE A RGP R GYG G G G +G ++G +E
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTE 111
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
+R++V L S SWQDLKD MR+AG+V +A+ + + P G
Sbjct: 112 FRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHK-----ERP---------------NEG 151
Query: 185 VVDYTNPEDMKYAIRKLDDTEF 206
V+++ + D+K A+ KLD TE
Sbjct: 152 VIEFRSYSDLKRAVEKLDGTEI 173
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTRERDLEKFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S DR G + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARGGSHRDRYDDRYGRRGRYDRYNNSSRSNSRYGPPLRTEYRLI 119
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GVV++
Sbjct: 120 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQNR--------------------NEGVVEF 159
Query: 189 TNPEDMKYAIRKLDDTEF 206
+DMK AI KLDDTE
Sbjct: 160 ATLKDMKTAIEKLDDTEL 177
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 34/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDIQRFFGGYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R GYG G +G +G ++G +E+R+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYGYGSR--SGYRNQRSGRDKYGPPVRTEFRLI 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 110 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RANEGVIEF 149
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 150 RSYSDMKRAMEKLDGTEI 167
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNE--------------------GVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +++ F YGR+ DI LK + FVEF++ RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA+G S RGP R RFG + +EY++I
Sbjct: 60 ELLGERVSVELAYG-SRRGPGG--RIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 117 VENLSSHVSWQDLKDYMRQAGEVTYADAHK--------------------IRPNEGVVEF 156
Query: 189 TNPEDMKYAIRKLDDTEF 206
N DMK AI KLD+T+
Sbjct: 157 ANYSDMKNAISKLDNTDL 174
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 34/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDLQRFFGGYGKLLEIDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E A RGP R GYG G +G G ++G +E+R++
Sbjct: 59 DLCGERVIIEHA-----RGPRRD--RDGYGYGSR--SGYRNQRTGRDKYGPPVRTEFRLV 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 110 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RANEGVIEF 149
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 150 RSYSDMKRAVEKLDGTEI 167
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 102/212 (48%), Gaps = 49/212 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D + E+E+ F K+GRI+ ELK + F+EF ++RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 NFDGCRLRVELA--HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
F G +LRVEL + R PS R +R +Y
Sbjct: 69 EFHGKKLRVELPFRYKDEPRRPSGRRYRT------------------------TRRGKYV 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+ V GLP S SWQDLKDHMR AG+ A+V R G G +
Sbjct: 105 LEVTGLPPSGSWQDLKDHMRDAGECGHADVFR----------------------GGVGEI 142
Query: 187 DYTNPEDMKYAIRKLDDTEFR-NPWARGRITV 217
+ + DM YAI + D + FR + + RI+V
Sbjct: 143 TFFSRSDMDYAIERFDGSTFRSHEGEKSRISV 174
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGN+P D + ++ DLF YGR+L +++K + + FV + + RDA+DA+ D +
Sbjct: 9 LYVGNIPEDATKEDIYDLFETYGRVLYVDIK-NGKISRFAFVAYRDFRDADDAVNYLDKF 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++ G LRVE + +G GP G+GG G G G R S++RV
Sbjct: 68 DYHGRSLRVEHS---TGVGPR------GWGGQPLSSINGDNFRIARGPGGPQRRSDFRVF 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEG 162
V G+P + SWQDLKDH R AG++CFA +S + G
Sbjct: 119 VEGIPQTGSWQDLKDHFRPAGEICFAMISHNKTG 152
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 103/211 (48%), Gaps = 50/211 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP D + EVE+ F K+G+I+ ELK + FVEF + RDA DAI+ +DG
Sbjct: 9 LYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARDAIKNKDGA 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F+G RLRVE+ P SS R+ + R R +Y V
Sbjct: 69 EFNGKRLRVEV--------PFSSKRQ-------------------SRRSDPPRKGKYLVE 101
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDH+R AG+ A V R G G V +
Sbjct: 102 VTGLPPTGSWQDLKDHLRAAGECGHANVFR----------------------GGVGEVSF 139
Query: 189 TNPEDMKYAIRKLDDTEFR-NPWARGRITVK 218
+ DM+YAI K D + F+ + + RITV+
Sbjct: 140 FSRGDMEYAIDKFDGSTFKSHQGEKARITVR 170
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G+ RGPS R G + R+G +EYR++
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRER----DRYDRDRRGGRYDKNSSRYGPPLRTEYRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L + SWQDLKD+MR+AG+V +A+ + + GVV++
Sbjct: 116 VENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKNE--------------------GVVEF 155
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI KLDDTE
Sbjct: 156 ATLSDMKTAIEKLDDTEL 173
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L +RE +++ F YGR+ DI LK + FVEF++ RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA+G S RGP R RFG + +EY++I
Sbjct: 60 ELLGERVSVELAYG-SRRGPGG--RIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 117 VENLSSHVSWQDLKDYMRQAGEVTYADAHK--------------------IRPNEGVVEF 156
Query: 189 TNPEDMKYAIRKLDDTEF 206
N DMK AI KLD+T+
Sbjct: 157 ANYSDMKNAISKLDNTDL 174
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDSSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + G ++ GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHK---GRKNE-----------------GVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 KSYSDMKRALEKLDGTEV 165
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 102/211 (48%), Gaps = 50/211 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLPS+ + E+E+ F K+G+I ++K + FVEFE+ RDA+DAI+ +DGY
Sbjct: 10 VYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDGY 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RLRVE+ SDR GY + R R Y V
Sbjct: 70 EFKGSRLRVEVPF---------SDR--GY----------------SRRRPTPRRGHYTVE 102
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR AG+ A+V R G G V +
Sbjct: 103 VLGLPPSGSWQDLKDHMRDAGECGHADVFR----------------------GGVGEVSF 140
Query: 189 TNPEDMKYAIRKLDDTEFR-NPWARGRITVK 218
+ DM AI D + FR + + +ITV+
Sbjct: 141 FSRRDMDAAIEMFDGSTFRSHEGEKAKITVR 171
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 105/198 (53%), Gaps = 27/198 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G S RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-SARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 159 ASLSDMKTAIEKLDDTEL 176
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S ++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKN-----GFAFVEFDDYRDADDAVYE 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG-------GAGGAGGAGAGAGA 114
+G G R+ VE A G + RG D RGGYG +
Sbjct: 56 LNGKELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSADSVNRNTRTASSYKQSL 114
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLN 174
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 115 PRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE----------- 163
Query: 175 FLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 164 ---------GVVEFATYSDLKNAIDKLDDTEL 186
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 103/200 (51%), Gaps = 28/200 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS--SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G R+ VE A G + RGP RGG G G GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPARG-TARGPGGRREYDRGGDRYGDRGRGGGGRYDKNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV L S SWQDLKD+MR+AG+V +A+ + + GVV
Sbjct: 120 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRK--------------------NEGVV 159
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
++ DMK AI KLDDTE
Sbjct: 160 EFATSSDMKTAIEKLDDTEL 179
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP RR G G G G G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGP----RRDGSYGSGRSGYGYRRSGRD--KYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 103/198 (52%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 158 ASLSDMKTAIEKLDDTEL 175
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L D+RE ++E F YGRI DI LK + FV+ + RDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA G RGP DR G RFG + Y+++
Sbjct: 60 RLMGERVTVELARGMR-RGPPDYDR-------------------GPRRFGPPTRTNYQLL 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL-----LTLNFLCVYSGTY 183
V L +S SWQDLKD MR+AGDV + S WQ + +T
Sbjct: 100 VENLSTSVSWQDLKDFMRQAGDVTYTXNLSTSVSWQDLKDFMRQAGDVTYTDAHKLRRHQ 159
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + DMK A+R LD+
Sbjct: 160 GVVEFASYSDMKNALRSLDNVSL 182
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 106/212 (50%), Gaps = 37/212 (17%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVG LP+D+R ++EDLF YGR+ D+ + + FVEFE+ RDAEDA++
Sbjct: 1 MSTRVYVGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GTFGFVEFEHHRDAEDAVKD 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSS-------DRRGGYGGGGAGGAGGAGAGAGAGRF 117
DG NF G R+ V+ A R P + DRRGG GG G+ R
Sbjct: 56 FDGKNFMGERIVVQHAKQSERRRPEPAGYGSDPYDRRGG-GGREPPSRYGSSVAPPPRRE 114
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV--SRDSEGWQSPAMILLTLNF 175
R ++R IV LP + SWQDLKD R+ G V FA+V +R E
Sbjct: 115 PRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADVDAARPDE-------------- 160
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GV++Y N +D + A+ K++ TE R
Sbjct: 161 --------GVIEYDNRDDYERALDKIEGTELR 184
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTEV 165
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 28/200 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG--AGAGAGAGRFGISRHSEYR 126
G R+ VE A G+ RGPS R Y GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
++V L + SWQDLKD+MR+AG+V +A+ + + GVV
Sbjct: 120 LVVENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKNE--------------------GVV 159
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
++ DMK AI KLDDTE
Sbjct: 160 EFATLSDMKTAIEKLDDTEL 179
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 103/198 (52%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 158 ASLSDMKTAIEKLDDTEL 175
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 LSYSDMKRALEKLDGTEV 165
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 27/198 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 159 ASLSDMKTAIEKLDDTEL 176
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 110/219 (50%), Gaps = 40/219 (18%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS SR IYVGNLPS + +VE+ F KYG IL ++K + F+EFE+ARDA D
Sbjct: 3 MSESISR-IYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAAD 61
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
AI+ +DG ++ G +LRVE+ P ++ G YG G G G G +
Sbjct: 62 AIKEKDGSDYGGNKLRVEV--------PFNARDNGKYGPRGGRGMMGRGMRSRR------ 107
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
Y V V GLP S SWQDLKDH+R+AG+ A+ V+
Sbjct: 108 --GRYVVEVSGLPLSGSWQDLKDHLREAGECGHAD----------------------VFK 143
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR-NPWARGRITVK 218
G V + + EDM AI K + + FR + + +IT++
Sbjct: 144 NGIGEVSFFHKEDMLEAIEKFNGSTFRSHEGEKSKITIR 182
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 47/194 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGNLP++I E ++ F K+G+I I LK+P RPP + F+E+E + A++A+R +G
Sbjct: 4 IFVGNLPTEIDEETLQSHFSKHGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESNGI 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G ++RVE++ G + +S + RFG ++YRV
Sbjct: 64 ELLGSKIRVEISRSGPNQTRDTSSNK---------------------RFG----TQYRVT 98
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD R+ GDV V +SG+ GV +
Sbjct: 99 VSNLSSKISWQDLKDFFRRGGDVVHTNVD---------------------HSGS-GVGSF 136
Query: 189 TNPEDMKYAIRKLD 202
++M+ AIRKLD
Sbjct: 137 ATYDEMERAIRKLD 150
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 103/198 (52%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 158 ASLSDMKTAIEKLDDTEL 175
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDTE
Sbjct: 161 VEFASLSDMKTAIEKLDDTEL 181
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAEDAIRGRD 66
++VGNLP + ++ DLF K+G I DI++K Y F++F + R AEDA+ RD
Sbjct: 15 VFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASVRSAEDAVDSRD 74
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
GY +D +LRVE A G G R ++YR
Sbjct: 75 GYEYDRYKLRVEFA-----------------------GEGKPRKHDDDRRDRDRHRTDYR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+++ LP WQ LKDHMRKAG V + +S G V
Sbjct: 112 LVISNLPHGCRWQHLKDHMRKAGPVGYVNISHGK-----------------------GYV 148
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITV 217
D+ + DMKYA+RK+D +E P RI +
Sbjct: 149 DFIHKSDMKYALRKMDGSELSTPDDTSRIKL 179
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 78/133 (58%), Gaps = 13/133 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++DG RLRVE G G G GG G SR SE RV+
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGG-------------GGGGGGAPRGRYGPPSRRSENRVV 124
Query: 129 VRGLPSSASWQDL 141
V GLP S SWQDL
Sbjct: 125 VSGLPPSGSWQDL 137
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDTE
Sbjct: 161 VEFASLSDMKTAIEKLDDTEL 181
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDTE
Sbjct: 161 VEFASLSDMKTAIEKLDDTEL 181
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R G GGGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDTE
Sbjct: 161 VEFASLSDMKTAIEKLDDTEL 181
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 42/198 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L D+RE ++E F YGRI ++ LK Y FVEF++ RDAEDA+ +G
Sbjct: 5 VFVGRLNYDVRERDLEKFFKGYGRIGEVLLK-----NGYGFVEFDDYRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA G RGP + GYGG + + R+G +EY+++
Sbjct: 60 KLMGERISVELARGIR-RGPGT-----GYGGASS-----------SRRYGPPSRTEYQLL 102
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L SS SWQDLKD MR+AG+V + + + L N GVV++
Sbjct: 103 VENLSSSVSWQDLKDFMRQAGEVTYTDAHK------------LRRN--------EGVVEF 142
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KL+ +
Sbjct: 143 ATYSDMKNALIKLNHMDL 160
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 102/201 (50%), Gaps = 29/201 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSS---DRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G + RG + DR G GGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARG-TARGSNRDRYDDRYGNRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GV 159
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDTE
Sbjct: 160 VEFASLSDMKTAIEKLDDTEL 180
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 103/198 (52%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ R GG G GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG--SNRDRYDDRYGGRRGGGGRYNDKSSSRYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------------------NEGVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 158 ASLSDMKTAIEKLDDTEL 175
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 101/198 (51%), Gaps = 34/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE +GP R GGY G GG G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHT-----KGPR---RDGGYSGRSKPRPGGYGR-WGRDRYGPPIRTDYRLI 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 110 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK--------------------NEGVIEF 149
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD TE
Sbjct: 150 RQYSDMKRALEKLDGTEV 167
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 105/198 (53%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG G + + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYEDRYGGRRGGGGRYNDKSSS-RYGPPLRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 118 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 158 ASLSDMKTAIEKLDDTEL 175
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 106/218 (48%), Gaps = 47/218 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
I V N+PS++RE E++D+FYK+GRI IE++ R Y +V+F + +DA DA
Sbjct: 4 IVVSNIPSNLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR------ 116
+ R+GY DG + VE+ S D RG Y G G G G G+
Sbjct: 64 KSRNGYEIDGQPITVEVD------SDSRDDSRGPYAKGKGKGGRYDDYGGGYGKGGSGSP 117
Query: 117 ------FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
G+S + YRV+V LP ASWQDLKD MR AG+ F EV+RD
Sbjct: 118 LGFYDSMGMSENY-YRVVVTNLPRGASWQDLKDRMRDAGECRFTEVTRDG---------- 166
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GV + D++ A+R LDDTE ++
Sbjct: 167 ------------VGVAGFAGQSDVERAVRTLDDTEMKS 192
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 96/195 (49%), Gaps = 47/195 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG + +D RE +VE LF KYGR D+ LK + FVEF++ RDA+DA+R G
Sbjct: 4 LYVGRVSADARERDVEHLFGKYGRTRDVTLK-----NGFGFVEFDDVRDADDAMRDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G RL VE A+ G R R RF ++YRV+
Sbjct: 59 DFMGDRLIVERANSGGRRDRGEPRER---------------------RFAPPTRTQYRVL 97
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V L + SWQDLKD +R G +V FA+ R+ +G GVV+
Sbjct: 98 VENLSTRISWQDLKDFVRTCGVEVTFADAHRERDG--------------------TGVVE 137
Query: 188 YTNPEDMKYAIRKLD 202
+ N DM++AIR+LD
Sbjct: 138 FANSTDMRHAIRRLD 152
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 103/211 (48%), Gaps = 38/211 (18%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVG LP D+R +++DLF YGR+ D+ + + FVEFE+ RDAEDA++
Sbjct: 1 MSTRVYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMG-----SFGFVEFEHPRDAEDAVKD 55
Query: 65 RDGYNFDGCRLRVELAHGG------SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
DG NF G R+ V+ A G +G G DRRGG G GA
Sbjct: 56 FDGRNFMGERIVVQHAKSGERRREPAGYGADPYDRRGGPPGREPPSRYGAPPPRRE---P 112
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEV--SRDSEGWQSPAMILLTLNFL 176
R ++R IV LP + SWQDLKD R+ G + FA+V SR E
Sbjct: 113 RIRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADVDPSRPDE--------------- 157
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GV++Y N +D + A+ K++ E R
Sbjct: 158 -------GVIEYDNRDDYERALDKIEGIELR 181
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 36/197 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTE 205
+ DMK A+ KLD TE
Sbjct: 148 VSYSDMKRALEKLDGTE 164
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 101/201 (50%), Gaps = 29/201 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA---GRFGISRHSEY 125
G R+ VE A G + RG + YGG GG + R+G +EY
Sbjct: 61 ELLGERVVVEPARG-TARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GV 159
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDTE
Sbjct: 160 VEFASLSDMKTAIEKLDDTEL 180
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 78/152 (51%), Gaps = 46/152 (30%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
DAEDAI GR+GY++ CRLRVEL G G
Sbjct: 120 DAEDAIYGRNGYDYGQCRLRVELP------------------------RNPGGGGPRGRT 155
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFL 176
SR SEYRV+V GLP S SWQDLKDHMR+AG VC+A+V +D
Sbjct: 156 GPPSRRSEYRVLVSGLPPSGSWQDLKDHMREAGGVCYADVQKDG---------------- 199
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDM+YA+R+LDD++FR+
Sbjct: 200 ------MGVVEFLRKEDMEYALRRLDDSKFRS 225
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 110/233 (47%), Gaps = 46/233 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YGR+ +I LK + FVEFE+ RD++DA+ +G
Sbjct: 30 VYIGRLSYQTRERDVERFFRGYGRLREINLK-----NGFGFVEFEDPRDSDDAVYELNGK 84
Query: 69 NFDGCRLRVELAHGGSGRGPSSSD-RRGGYGGGGA---------GGAGGAGAGAGAGRFG 118
G R+ +E A RGP D R GY G GG G G ++G
Sbjct: 85 ELCGERVTIEHA-----RGPVRRDYRDSGYSNRGGDRDSYRSDRGGFGPPRRRGGVDKYG 139
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCV 178
+E+R+IV L S SWQDLKD+MR+AG+V FA+ + +
Sbjct: 140 PPTRTEHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHKQHK----------------- 182
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVV+ + D+K I KLD TE GR +K + P R RSRS
Sbjct: 183 ---NEGVVELASHSDLKNVIAKLDGTEI-----SGR-KIKLIEDRPKRHRSRS 226
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 101/215 (46%), Gaps = 40/215 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI---RGR 65
IY+G+LP + E +VE F K+G+I+ +E K YCF+E+ + RDA DAI GR
Sbjct: 17 IYIGSLPGEYTEKDVEREFEKFGKIVKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 66 DGYNF-DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F D LRVE+ SGR SD A G GRF +
Sbjct: 77 PPPGFRDAAPLRVEIPLARSGRTDGFSD-----------DAMPRGLAGRRGRFVLE---- 121
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
VRGLP S SWQDLKDH R GDV FAEV +D + S G
Sbjct: 122 ----VRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDS----------------VMG 161
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR-NPWARGRITVK 218
V + + DM AI LD + FR + + RITV+
Sbjct: 162 KVSFFSKRDMMEAIEALDGSTFRSHEGEKSRITVR 196
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 81/153 (52%), Gaps = 43/153 (28%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDA+ GR+GY++ CRLRVE GR G G
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFPRAYGGR---------------------GGWPRGGR 79
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 80 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--------------- 124
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 125 -------MGMVEYLRKEDMEYALRKLDDTKFRS 150
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 103/213 (48%), Gaps = 35/213 (16%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR I+VG L RE ++E F +GRI DI +K +CFVEF+++RDA+D
Sbjct: 1 MSGR---RIFVGRLSYRAREGDIERFFKGFGRITDINIK-----NGFCFVEFDDSRDADD 52
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA-------GGAGAGAG 113
A+ + G R+ VELA G G D GG G G G
Sbjct: 53 AVYEMNNQMLCGERVTVELAKGTQRWGQERRDYGGGRDYGRGDYGGGYGGRNNDRGFGRR 112
Query: 114 AGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTL 173
+F +EYRVIV L + +WQ+LKDH+R+AG++ +A+ +
Sbjct: 113 QSKFAPPMRTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHK--------------- 157
Query: 174 NFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ GVVD+ + +DMK AI K ++TE
Sbjct: 158 -----HRRNEGVVDFASYDDMKNAIEKFNNTEL 185
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 81/167 (48%), Gaps = 43/167 (25%)
Query: 46 CYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELA-----HGGSGRGPSSSDRRGGYGGG 100
CY FVEFE R AEDA+ R GY + G LRVE GSG P++ G +GGG
Sbjct: 5 CYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSRRAGSGVNPNTIPT-GSFGGG 63
Query: 101 GAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
AG R + +RV+V LP WQ LKDHMRKAG V FAE
Sbjct: 64 SAG---------------PPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAE----- 103
Query: 161 EGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
V S GVV+Y +PED++YA+R LD TE R
Sbjct: 104 -----------------VLSQGRGVVEYEHPEDLQYAVRSLDKTELR 133
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 44/200 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP + ++ED F K+G+++ +LK + F+E+E+ARDA DAI+ RDG
Sbjct: 10 VYVGNLPESCTQKDIEDEFGKFGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGS 69
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
++G RLRVE P S A G A G R Y V
Sbjct: 70 EYEGRRLRVET--------PFS--------------AKDDGRPARRRGPGAPRRGRYIVE 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP + SWQDLKDHMR+AG+ A+V R G G V +
Sbjct: 108 VSGLPPTGSWQDLKDHMREAGECAHADVFR----------------------GGVGEVSF 145
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
+ DM+YAI K D + F++
Sbjct: 146 YSRSDMEYAIDKFDGSTFKS 165
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 80/153 (52%), Gaps = 43/153 (28%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ CRLRVE G G G
Sbjct: 4 RDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRGGWPRGGR 42
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 43 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--------------- 87
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 88 -------VGMVEYLRKEDMEYALRKLDDTKFRS 113
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 80/153 (52%), Gaps = 43/153 (28%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ CRLRVE G G G
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRGGWPRGGR 39
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 40 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--------------- 84
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 85 -------VGMVEYLRKEDMEYALRKLDDTKFRS 110
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 99/198 (50%), Gaps = 33/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G P D+ G G G G ++G +EYR+I
Sbjct: 60 ELLGERVSVERARG----TPRGCDQ----WRGSGGRGYGPPRGRSRDKYGPPTRTEYRLI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 112 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------------------NEGVVEF 151
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLDDTE
Sbjct: 152 ASYSDMKNAIDKLDDTEL 169
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 101/201 (50%), Gaps = 29/201 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA---GRFGISRHSEY 125
G R+ VE A G + RG + YGG GG + R+G +EY
Sbjct: 61 ELLGERVVVEPARG-TARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------------------NEGV 159
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDT+
Sbjct: 160 VEFASLSDMKTAIEKLDDTDL 180
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 101/220 (45%), Gaps = 44/220 (20%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S ++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYE 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAG 106
+G G R+ VE A G+ RG D RGGYG
Sbjct: 56 LNGKELLGERITVERAR-GTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRT 114
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+ R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 115 TSSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR----- 169
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 170 ---------------NEGVVEFATYSDLKNAIEKLDDTEL 194
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 36/195 (18%)
Query: 12 GNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFD 71
G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G +
Sbjct: 1 GRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLC 55
Query: 72 GCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRG 131
G R+ VE A RGP R G YG +G +G +G ++G +EYR+IV
Sbjct: 56 GERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLIVEN 104
Query: 132 LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNP 191
L S SWQDLKD+MR+AG+V +A+ + + GV+++ +
Sbjct: 105 LSSRCSWQDLKDYMRQAGEVTYADAHKGRK--------------------NEGVIEFVSY 144
Query: 192 EDMKYAIRKLDDTEF 206
DMK A+ KLD TE
Sbjct: 145 SDMKRALEKLDGTEV 159
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 102/201 (50%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G GS R DR GG GGG + R+G +EY
Sbjct: 61 ELLGERVVVEPARGTARGSHRDRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------------------NEGV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK AI KLDDT+
Sbjct: 161 VEFASLSDMKTAIEKLDDTDL 181
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G + RG D RGGYG +
Sbjct: 114 ELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------- 223
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 224 -----------NEGVVEFATYSDLKNAIDKLDDTEL 248
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 100/213 (46%), Gaps = 65/213 (30%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPC---YCFVEFENARD 57
MS ++R +Y+G LP DI E EVE L ++GRI D+ C + FVE+ ++RD
Sbjct: 1 MSSGYTR-VYIGRLPRDITEREVERLAREFGRIRDVR--------CLNGFAFVEYSDSRD 51
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGR---GPSSSDRRGGYGGGGAGGAGGAGAGAGA 114
A D +R DG +D RL V+ A GS R SSS RRG YG
Sbjct: 52 ARDCVRELDGSRYDRERLSVQPAKSGSDRRDRPASSSLRRGDYG---------------- 95
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLN 174
++V+GLP+ SWQDLKD RK GDV F + D+ G
Sbjct: 96 ------------IVVQGLPARTSWQDLKDLFRKVGDVIFTNI--DNSG------------ 129
Query: 175 FLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G+V++T+ D AI + D TEF+
Sbjct: 130 --------DGIVEFTSETDKNSAIEQFDKTEFQ 154
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 98/207 (47%), Gaps = 54/207 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+L R+ +++ F +YGRI I++++ + F+EFE+ RDAEDA+ DG
Sbjct: 5 IYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRM-----GFAFIEFEDRRDAEDAVAEMDGR 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
FDG R+ V+ G GP + RR +E+R+
Sbjct: 60 EFDGARIVVQPGRGHRPNGPKFATRR----------------------------TEHRIT 91
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEV-SRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V GL S SWQDLKD R+AG V +++V R W GVV+
Sbjct: 92 VEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRW--------------------GVVE 131
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGR 214
Y + +DMK AIR LDDT + R R
Sbjct: 132 YVSRDDMKAAIRTLDDTRLGGKYIRVR 158
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 80/152 (52%), Gaps = 43/152 (28%)
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
DAEDAI GR+GY++ CRLRVE GR G G
Sbjct: 132 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGR---------------------GGWPRGGRN 170
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFL 176
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 171 GPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---------------- 214
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 215 ------MGMVEYLRKEDMEYALRKLDDTKFRS 240
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 80/153 (52%), Gaps = 43/153 (28%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ CRLRVE G G G
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFPRTY---------------------GGRGGWPRGGR 39
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 40 SGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--------------- 84
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLD+T+FR+
Sbjct: 85 -------MGMVEYLRKEDMEYALRKLDETKFRS 110
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 34/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R GY G + + G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYSYGSRRYS--SRRATGRDKYGPPVRTEYRLI 109
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 110 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE--------------------GVIEF 149
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 150 RSYSDMKRALDKLDGTEI 167
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 92/204 (45%), Gaps = 55/204 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S +RE +++D F ++G+I DI LK + FVE++++ DAE A+R DG
Sbjct: 7 VYVGHLSSRVRERDLDDEFSRFGKIRDISLK-----QGFAFVEYDHSEDAEYAVRKMDGV 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N +G R+ VE A RGP RGG G YR+
Sbjct: 62 NLEGMRILVEFAKETPKRGP-----RGGSG--------------------------YRIY 90
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
L + SWQDLKD RKAG V + +V GV++Y
Sbjct: 91 AENLSQNTSWQDLKDFARKAGKVIYTDV-------------------FSERGEKLGVIEY 131
Query: 189 TNPEDMKYAIRKLDDTEFRNPWAR 212
EDM+ A+ KLD TE R
Sbjct: 132 ATREDMEDALYKLDGTELHRSKVR 155
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 37/199 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F +G+I ++ LK + FVEF++ RDAEDAI +
Sbjct: 4 VYVGRLSYRARERDVEHFFRGFGKIREVTLK-----NGFGFVEFDDPRDAEDAIYELNNR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A +G DRRG Y RFG R++E+R++
Sbjct: 59 DLMGERVIVEFA-----KGTRYDDRRGAYP------LITPSYLLFRPRFGRPRNTEWRLV 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRD-SEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+ L S A+W+D+KD+MR+AGDV FA+ + EG GVVD
Sbjct: 108 INNLSSRATWRDIKDYMRQAGDVTFADAHKQLGEG--------------------RGVVD 147
Query: 188 YTNPEDMKYAIRKLDDTEF 206
+ +DMK A+++LD TE
Sbjct: 148 FATYDDMKDALKRLDGTEL 166
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G + RG D RGGYG +
Sbjct: 114 ELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------- 223
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 224 -----------NEGVVEFATYSDLKNAIDKLDDTEL 248
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G + RG D RGGYG +
Sbjct: 114 ELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------- 223
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 224 -----------NEGVVEFATYSDLKNAIDKLDDTEL 248
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 82/153 (53%), Gaps = 43/153 (28%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
+DAEDAI GR+GY++ CRLRVE P + G G G
Sbjct: 15 QDAEDAIYGRNGYDYGQCRLRVEF--------PRTY-------------GGRGGWPRGGR 53
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 54 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--------------- 98
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 99 -------VGMVEYLRKEDMEYALRKLDDTKFRS 124
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 94/198 (47%), Gaps = 45/198 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L D+RE ++E F YGRI DI LK + FV+ + RDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA G RGP DR G RFG + Y+++
Sbjct: 60 RLMGERVTVELARGMR-RGPPDYDR-------------------GPRRFGPPTRTNYQLL 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L +S SWQDLKD MR+AGDV + + + GVV++
Sbjct: 100 VENLSTSVSWQDLKDFMRQAGDVTYTDAHK--------------------LRRHQGVVEF 139
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+R LD+
Sbjct: 140 ASYSDMKNALRSLDNVSL 157
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 25 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 84
Query: 69 NFDGCRLRVELAHG--GSGRGPSS 90
++DG RLRVE G+G GPSS
Sbjct: 85 DYDGYRLRVEFPRSGRGTGSGPSS 108
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G+ RG D RGGYG +
Sbjct: 114 ELLGERITVERAR-GTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
R+G +EYR+IV L S SWQDLKD+MR AG+V +A+ +
Sbjct: 173 KQSLPRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRR--------- 223
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 224 -----------NEGVVEFATYSDLKNAIDKLDDTEL 248
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 96/198 (48%), Gaps = 34/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD+ EV ++F KY D+ LK + FVEF++ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTR-----FAFVEFDHNRDADHALERLDGT 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG ++G ++Y++I
Sbjct: 74 LFRGQRIVVEIA-----RGPKTADKYLFRGGMDREPT----QATWVQKYGAPEITQYKLI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+R L + WQDLKD MRKAG V +A+V R+ + G+V +
Sbjct: 125 IRNLSTRIEWQDLKDLMRKAGRVTYAQVHRN--------------------NLREGIVCF 164
Query: 189 TNPEDMKYAIRKLDDTEF 206
N DM AI DD E
Sbjct: 165 ENKHDMLRAIDIFDDYEL 182
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 95/198 (47%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F +GRI DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RG S R G + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPA-----RGIDRSADRYRRDRYYERDRGRSRYDDYNYRYGPPTRTEYRLI 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 116 VENLSSRISWQDLKDYMRQAGEVTYADAHKQHR--------------------NEGVVEF 155
Query: 189 TNPEDMKYAIRKLDDTEF 206
DM+ AI KLD TE
Sbjct: 156 ATHSDMRAAIEKLDGTEL 173
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+G LP+D+R ++EDLF YGR+ D+ + + FVEFE+ RDAEDA++
Sbjct: 1 MSTRVYIGKLPADVRRGDIEDLFRDYGRLYDVRIMG-----SFGFVEFEHPRDAEDAVKD 55
Query: 65 RDGYNFDGCRLRVELAHGG-------SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
DG NF G R+ V+ A G +G DRR GG + GA R
Sbjct: 56 FDGKNFMGERILVQHAKSGERRRAEPAGYASDPYDRR---GGARDAPSSRYGAPPPPRRE 112
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R ++R ++ LP + SWQDLKD R+ G + FA+V ++
Sbjct: 113 PRLRRGQFRCVISNLPPNTSWQDLKDIGREHGSISFADVDPNNP---------------- 156
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G ++Y N +D + A+ K++ E R
Sbjct: 157 ----DEGFIEYDNRDDYERALDKIEGIELR 182
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 44/216 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 NFDGCRLRVELAHGGSGRGPSS---SDRRGGYGGG---------------GAGGAGGAGA 110
G R+ VE A G + RG D RGGYG +
Sbjct: 114 ELLGERITVERARG-TPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSY 172
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
R+G +EYR+ V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 173 KQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------- 223
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ D+K AI KLDDTE
Sbjct: 224 -----------NEGVVEFATYSDLKNAIDKLDDTEL 248
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 38 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 92
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 93 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 147
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 148 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE--------------------GVIEF 187
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 188 RSYSDMKRALDKLDGTEI 205
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 35/204 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L +RE ++E F KYGRI ++ +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA------GAGRFGISRH 122
G R+ VE A G P D+ G GG G G G R+G
Sbjct: 60 ELLGERVSVERARG----TPRGCDQWRGSGGRGYGPPRGRSRDNREPDMRSHDRYGPPTR 115
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+EYR+IV L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 116 TEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR--------------------N 155
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + DMK AI KLDDTE
Sbjct: 156 EGVVEFASYSDMKNAIDKLDDTEL 179
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+I D+ LK + FV F++ RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E+A G + RGP GG + + + GI H YR+I
Sbjct: 62 SLCGERVMLEIAKG-TPRGP---------GGESSSSSYYQQQQPRSSTKGIPNHG-YRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S +WQDLKD+MR+ G+V +A+ +R Y GVV++
Sbjct: 111 VENLSSRVTWQDLKDYMRQCGEVVYADANR--------------------YRRNEGVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
++ ++MKYAI KL+ TE
Sbjct: 151 SSRKEMKYAIEKLNGTEI 168
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG G GG + G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 79/153 (51%), Gaps = 43/153 (28%)
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG 115
RDAEDAI GR+GY++ C LRVE G G G
Sbjct: 1 RDAEDAIYGRNGYDYGQCWLRVEFPRTY---------------------GGRGGWPRGGR 39
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 40 NGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG--------------- 84
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 85 -------VGMVEYLRKEDMEYALRKLDDTKFRS 110
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 32/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDAEDA+ +G
Sbjct: 4 VYIGRLSYHVREKDLQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDAEDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R GY G + +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRD--RDGYSYSSRSGGYSSRRTSGRDKYGPPVRTEYRLI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 112 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 151
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 152 RSYSDMKRALDKLDGTEI 169
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 99/200 (49%), Gaps = 37/200 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F +GRI DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDR--RGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G R+ VE A G S+DR RG +GG G +G +EYR
Sbjct: 61 ELLGERVVVEPARGID----RSADRYRRGDRHYERSGG------GRSRYEYGPPTRTEYR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV + S SWQDLKD+MR+AG+V +A+ + GVV
Sbjct: 111 LIVENVSSRISWQDLKDYMRQAGEVTYADAHKQHR--------------------NEGVV 150
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
++ DM+ AI KLD TE
Sbjct: 151 EFATHSDMRAAIEKLDGTEL 170
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 38/198 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L D+RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VELA RG G + R+G +EY++
Sbjct: 60 DLMGDRVSVELA-------------RGIRRGADYYRSRSTAPSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + L N GVV++
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHK------------LRRN--------EGVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD+T+
Sbjct: 147 ATYSDMKNALDKLDNTDL 164
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG G GG + G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 96/200 (48%), Gaps = 46/200 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLPSD + E+E+ F K+GRIL +LK + F+EF ++RDA DAIR +DG+
Sbjct: 9 IYIGNLPSDCSQKELEEEFEKFGRILYCDLKRSYTGSSFAFIEFSDSRDARDAIRDKDGF 68
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G +LRVEL + S R G R +Y +
Sbjct: 69 EFHGKKLRVELPFRERDQASGGSRRHG------------------------PRRGKYVLE 104
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V GLP S SWQDLKDHMR AG A+V R G G + +
Sbjct: 105 VTGLPPSGSWQDLKDHMRDAGHCGHADVFR----------------------GGVGEISF 142
Query: 189 TNPEDMKYAIRKLDDTEFRN 208
+ DM+YAI K D + F++
Sbjct: 143 FSRSDMEYAIEKYDGSTFKS 162
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 43/231 (18%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSG+ +Y G LP+ E ++E+L +G++ +++ K Y +V F+ +DA+
Sbjct: 1 MSGK----VYCGRLPATATEKDLENLVKVFGKVREVDFK-----EGYAYVVFKENKDADR 51
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ + F G ++ +E A + R G GG A G G A + G
Sbjct: 52 AVAALNNSEFHGAKILMEKA----------KEMRNGVGGYTAAG----GYTARTRQMGPP 97
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
SE+RVIV L + A W +LK+ M AG+VC+A+ R G
Sbjct: 98 VRSEFRVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPGE----------------- 140
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRS 231
GVV++T EDMK AI LD EF R R + R S SRSRS S
Sbjct: 141 ---GVVEFTTEEDMKRAIASLDKCEFYGKRIRLRQELPRSGTSKSRSRSPS 188
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 38/198 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L D+RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VELA RG G + R+G +EY++
Sbjct: 60 DLMGDRVSVELA-------------RGIRRGADYYRSRSTAPSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + L N GVV++
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHK------------LRRN--------EGVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD+T+
Sbjct: 147 ATYSDMKNALDKLDNTDL 164
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNE--------------------GVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ +LD TE
Sbjct: 154 RSYSDMKRALDRLDGTEI 171
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 81/147 (55%), Gaps = 32/147 (21%)
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
+ RDGY++DG RLRVE GG GP S G G G R +R
Sbjct: 1 VHARDGYDYDGYRLRVEFPRGG---GPGSYRGN-------RSGGSSGGDRGGGRRGPPAR 50
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
S++RV+V GLP S SWQDLKDHMR+AGDVCFA+V +D G
Sbjct: 51 RSQFRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---------------------G 89
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEFRN 208
T GVV++ EDMKYA++KLDD+ FR+
Sbjct: 90 T-GVVEFLRLEDMKYAVKKLDDSRFRS 115
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 95/201 (47%), Gaps = 46/201 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP E ++E F YGR+ D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G G + S SD R R+G + Y
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHR------------------SHERYGPPTRTNY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 103 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHR--------------------NEGV 142
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K AI KLDDTE
Sbjct: 143 VEFASYSDLKNAIEKLDDTEL 163
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G + VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGEHVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 106/215 (49%), Gaps = 40/215 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK------IPPRPPCYCFVEFENARDAEDAI 62
I V N+PS +RE E++D+FYK+GRI IE++ R Y +V+F + +DA DA
Sbjct: 4 IVVSNIPSTLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSS---------DRRGGYGGGGAGGAGGAGAGAG 113
+ R+GY DG + VE+ G R S S R G GGG G G AG
Sbjct: 64 KSRNGYEIDGQPITVEV--DGDYRDDSRSIPSKGKGKGGGRYGDYGGGYGKGGSGSPSAG 121
Query: 114 AGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTL 173
G+S YRV+V LP ASWQDLKD MR AG+ F EV+RD
Sbjct: 122 YDSMGMS-EKYYRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDG------------- 167
Query: 174 NFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GV + D++ A+R LDDTE ++
Sbjct: 168 ---------VGVAGFAGQSDVERAVRTLDDTEMKS 193
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 101/203 (49%), Gaps = 29/203 (14%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
R+SR IY+G LP RE +VE F +GRI DI LK + FVEF++ RDAEDA+
Sbjct: 3 RYSR-IYIGRLPYQAREKDVERFFRGFGRIRDINLK-----NGFGFVEFDDYRDAEDAVY 56
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G G R+ VE A G R R GG G G + A ++G +
Sbjct: 57 ELHGRELLGERVIVEHARGNRDRDDYRDRRGGGRDFRQDRGRDGR---SNASKYGPPLRT 113
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
++R++V + S SWQDLKD MR AG++ +A+ + G
Sbjct: 114 DFRILVENVSSRVSWQDLKDFMRTAGEITYADAHKQKTGE-------------------- 153
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
G+V+Y EDMK AIRKL+ T+
Sbjct: 154 GIVEYATYEDMKNAIRKLNGTDL 176
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 55/205 (26%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+G L D + ++E LF YG I +I LK + FVEF + RDA+D +
Sbjct: 1 MSTRVYIGRLARDASKRDIERLFKNYGDIREINLKT-----GFGFVEFADERDAKDVVYD 55
Query: 65 RDGYNFDGCRLRVELAHGG---SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G +F G RL VE+A G R P +DR SR
Sbjct: 56 FHGKSFLGERLIVEIAKGTRRHDERRPRGNDR--------------------------SR 89
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
S YR+IV + +WQDLKD MRKAG+V FA++SRD
Sbjct: 90 -SHYRLIVENIAPGTNWQDLKDMMRKAGEVTFADISRD--------------------RP 128
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEF 206
+ G+V++ +DM+YA++KL+D E
Sbjct: 129 SEGIVEFHVRDDMEYALKKLNDREL 153
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 97/201 (48%), Gaps = 38/201 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 23 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 72
Query: 69 NFDGCRL---RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G L RV + H S RG GGG + G+ R+G +E+
Sbjct: 73 ELNGKELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGS-----RYGPPVRTEH 127
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD MRKAG+V F + R ++ GV
Sbjct: 128 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTK--------------------NEGV 167
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K AI KLD TE
Sbjct: 168 VEFASRSDLKNAISKLDGTEL 188
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVEL--AHGGSGRGPSSS 91
++ CRLRVE A+GG G P +S
Sbjct: 76 DYGQCRLRVEFPRAYGGRGGWPRAS 100
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 31/199 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGP-SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ G R+ VE A RGP D G GG + +G ++G +E+R+
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEFRL 113
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
IV L S SWQDLKD MR+AG+V +A+ ++ GV++
Sbjct: 114 IVENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIE 153
Query: 188 YTNPEDMKYAIRKLDDTEF 206
+ + DMK A+ KLD TE
Sbjct: 154 FRSYSDMKRALDKLDGTEI 172
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 97/201 (48%), Gaps = 38/201 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDGCRL---RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G L RV + H S RG GGG + G+ R+G +E+
Sbjct: 56 ELNGKELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGS-----RYGPPVRTEH 110
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD MRKAG+V F + R ++ GV
Sbjct: 111 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTK--------------------NEGV 150
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K AI KLD TE
Sbjct: 151 VEFASRSDLKNAISKLDGTEL 171
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 100/203 (49%), Gaps = 39/203 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GN+ + RE +VE F YG++ +I LK Y FVEFE+ RDA+DA++ DG
Sbjct: 8 LYLGNVSDETRERDVEKFFKGYGKLREIALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGY---GGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+ +G R+RVE A S D+RGG GA R R ++Y
Sbjct: 63 DMNGSRVRVEFAR-------SPRDKRGGSRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQY 115
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCF--AEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
R+ V L S ASWQDLKD+ R GD+ + A R++E
Sbjct: 116 RIRVENLSSRASWQDLKDYFRSCGDITYTNAHKPRNNE---------------------- 153
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + M+ A+ +LDDTE
Sbjct: 154 GVVEFGDKRAMENALDRLDDTEL 176
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+++LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G + VE A RGP YG GG + +G ++G +EYR+I
Sbjct: 59 ELCGEHVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 31/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L +RE +++ F YG++L+I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYVGKLSYHVREKDIQRFFSGYGKLLEIDLK-----NGYGFVEFEDMRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ +E A RGP D G G G GG + G ++G +E+R+I
Sbjct: 59 ELCGERVVIEHA-----RGPRR-DGYGYGGHQGDGGGYSSWNRTGRDKYGPPVRTEHRLI 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ + GV+++
Sbjct: 113 VENLSSRCSWQDLKDFMRQAGEVTYADAHKG--------------------RANEGVIEF 152
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD T+
Sbjct: 153 RSRSDMKRALEKLDGTDI 170
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 50/201 (24%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R IYVG +P D +VE F +YG ++D+ + + F+E+++ RDAEDA+ +
Sbjct: 6 RRIYVGRIPPDASRTDVEKYFGRYGTLMDVRIM-----AGFGFLEYDSVRDAEDAVHDLN 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL VE A GR S GG+G R +R
Sbjct: 61 GRDFMGERLIVEFAKAPRGRDIHS----GGHG---------------------PRRGGFR 95
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
++V+GL SWQDLKD R+AG+V A+V R+ G G++
Sbjct: 96 LLVKGLSHETSWQDLKDFARQAGNVTRADVDRNMPG--------------------EGLI 135
Query: 187 DYTNPEDMKYAIRKLDDTEFR 207
++ + +D AIRKLD TE +
Sbjct: 136 EFASQDDADNAIRKLDGTELK 156
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 29/201 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+LP +RE +V+ F +GRI +I LK Y F+EF++ RDA+DA+ +G
Sbjct: 7 IYIGHLPYGVRERDVKKFFKGFGRIKEILLK-----NGYGFIEFDDYRDADDAVYELNGR 61
Query: 69 NFDGCRLRVELAHGGSGRGPS---SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G R+ VE A G+ RG S R G R+G + Y
Sbjct: 62 ELNGERVSVERAR-GTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD MR+AG+V +A+ + + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRK--------------------NEGV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K A+ KLDDTE
Sbjct: 161 VEFASYSDLKTALDKLDDTEL 181
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 95/201 (47%), Gaps = 46/201 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP E ++E F YGR+ D+ +K Y FVEF++ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G G + S SD R R+G + Y
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHR------------------SHERYGPPTRTNY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + GV
Sbjct: 103 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNE--------------------GV 142
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K AI KLDDTE
Sbjct: 143 VEFASYSDLKNAIEKLDDTEL 163
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 36/184 (19%)
Query: 23 VEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHG 82
VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G + G R+ VE A
Sbjct: 1 VERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-- 53
Query: 83 GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLK 142
RGP R G YG +G +G +G ++G +EYR+IV L S SWQDLK
Sbjct: 54 ---RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLK 104
Query: 143 DHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLD 202
D+MR+AG+V +A+ + + GV+++ + DMK A+ KLD
Sbjct: 105 DYMRQAGEVTYADAHKGRK--------------------NEGVIEFVSYSDMKRALEKLD 144
Query: 203 DTEF 206
TE
Sbjct: 145 GTEV 148
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP YG GG + +G ++G +E+R+I
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 114 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 154 RSYSDMKRALDKLDGTEI 171
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+I D+ LK + FV F++ RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E+A G + RGP DRR + + + GI H YR+I
Sbjct: 62 SLCGERVMLEIAKG-TPRGPGG-DRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLI 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S +WQDLKD+MR+ G+V +A+ +R Y GVV++
Sbjct: 119 VENLSSRVTWQDLKDYMRQCGEVVYADANR--------------------YRRNEGVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEF 206
++ ++MKYAI KL+ TE
Sbjct: 159 SSRKEMKYAIEKLNGTEI 176
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 95/203 (46%), Gaps = 40/203 (19%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP+D R +V F YGRI+D + + FVEFENA+DAEDA+
Sbjct: 1 MSRRLYLGRLPTDARSDDVSKFFDGYGRIIDCRVMT-----GFGFVEFENAKDAEDAVHN 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G + VE A R + RGG GG GA GI
Sbjct: 56 FNGKPFMGVNIVVEFAKESRPRREVYDNDRGG---------GGHGAPRSRRPPGI----- 101
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+IV G+ SWQDLKD R AG V FA++ RD G G
Sbjct: 102 -RLIVSGVSRDTSWQDLKDFGRDAGSVSFADIDRDVPGQ--------------------G 140
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++Y + ED A+++LD + R
Sbjct: 141 VLEYLSREDADRAVKELDGKDLR 163
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L RE +VE F YGRI +I LK + FVEFE+ RDA+DA+ +G
Sbjct: 6 VFVGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFEDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
R+ +E A G S R Y G G+ ++G +E+R+I
Sbjct: 61 ELCNERVTIEHARARRGGRGRYSQRFSYY----------QSYGGGSSQYGPPLRTEHRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V F + R++ GVV++
Sbjct: 111 VENLSSRVSWQDLKDFMRKAGEVTFVDAHRNNP--------------------NEGVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD +E
Sbjct: 151 ASSSDMKSAMDKLDGSEL 168
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR +VEDLFYKYG I DI+LK P + FV+FE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGY 76
Query: 69 NFDGCRLRVEL 79
++DG RLRVE
Sbjct: 77 DYDGYRLRVEF 87
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 97/206 (47%), Gaps = 45/206 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS--------SDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
C RV + H S RG S R GGY +GG+ R+G
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGS----------RYGPP 108
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+E+R+IV L S SWQDLKD MRK G+V F + R +
Sbjct: 109 VRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKK------------------- 149
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + DMK AI KLD T+
Sbjct: 150 -NEGVVEFASHSDMKNAIEKLDGTDL 174
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 32/200 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR--FGISRHSEYR 126
G R+ VE A RGP G G G G + G + + +GR +G +EYR
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYGGGYWGGGRSNGYSSRSRSGRDKYGPPVRTEYR 113
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV L S SWQDLKD MR+AG+V +A+ ++ GV+
Sbjct: 114 LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVI 153
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
++ DMK A+ KLD T+
Sbjct: 154 EFRTYSDMKRALDKLDGTDI 173
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 97/201 (48%), Gaps = 29/201 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L +RE ++E F K GR+ DI +K Y FVEF++ RDA+DA+ +G
Sbjct: 7 VFVGGLSHRVRERDLERFFQKIGRVKDIAMK-----NGYAFVEFDDYRDADDAVYELNGR 61
Query: 69 NFDGCRLRVELAHGGSGRGPS---SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G R+ VE A G+ RG S R G R+G + Y
Sbjct: 62 ELNGERVSVERAR-GTPRGSDVWRGSGRGGDLPPPPPRRPRRDARDDRNDRYGPPTRTNY 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD MR+AG+V +A+ + + GV
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRK--------------------NEGV 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K A+ KLDDTE
Sbjct: 161 VEFASYSDLKTALDKLDDTEL 181
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 37/203 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHG-----GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G R+ VE A G G SS D+ G GG + +G ++G +
Sbjct: 59 ELCGERVIVEHARGPRRDRGDWVVVSSHDK-------GGGGGYSSRRTSGRDKYGPPVRT 111
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
E+R+IV L S SWQDLKD MR+AG+V +A+ ++
Sbjct: 112 EFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNE 151
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 152 GVIEFRSYSDMKRALDKLDGTEI 174
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 35/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A RGP R G G + + G ++G +EYR++
Sbjct: 59 ELCGERVIVEHA-----RGP-----RRDRDFYGGGSGYSSRSRTGRDKYGPPVRTEYRLV 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 109 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 148
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD T+
Sbjct: 149 RSHSDMKRALDKLDGTDI 166
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 31/199 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YGR+L+++LK Y FV+FE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVKFEDSRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGP-SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ G R+ VE A RGP D G GG + +G ++G +E+R+
Sbjct: 59 DLCGERVIVEHA-----RGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEHRL 113
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
IV L S SWQDLKD MR+AG+V +A+ ++ GV++
Sbjct: 114 IVENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIE 153
Query: 188 YTNPEDMKYAIRKLDDTEF 206
+ + DMK A+ KLD TE
Sbjct: 154 FRSYSDMKRALDKLDGTEI 172
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 104/221 (47%), Gaps = 41/221 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+LP + + +VE F K+G+I+ +E K YCF+E+ + RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGCR----LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G R LRVE+ + S R G+G A G GRF +
Sbjct: 77 PPPGMRGAAPLRVEIPL-------ARSSRPDGFG----EEALPRGLAGRRGRFVLE---- 121
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
VRGLP S SWQDLKDH R GDV FAEV +D + S G
Sbjct: 122 ----VRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDS----------------VMG 161
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR-NPWARGRITVKRYDRSP 224
V + + DM AI LD + FR + + RI+V R R+P
Sbjct: 162 KVSFFSKRDMMEAIEVLDGSTFRSHEGEKSRISV-REKRAP 201
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 94/198 (47%), Gaps = 33/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G LP D+RE +VE YG+I DI LK Y FVEF++ RDAEDA+ +G
Sbjct: 4 IFLGRLPRDVRESDVEKFLRGYGKIRDISLK-----RGYGFVEFDDHRDAEDAVHDLNGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE + G G DRR G G +G + Y VI
Sbjct: 59 DLIGERVVVEFSKGRRSEG-GGRDRRDF-------SGRGGRDGGRRPIYGPPVRTNYSVI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+ RK G V +A+ + G GVV++
Sbjct: 111 VENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGE--------------------GVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ +D+ AI KLDDTE
Sbjct: 151 ESKDDLNTAIEKLDDTEL 168
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 104/221 (47%), Gaps = 41/221 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G+LP + + +VE F K+G+I+ +E K YCF+E+ + RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 NFDGCR----LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G R LRVE+ + S R G+G A G GRF +
Sbjct: 77 PPPGMRGAAPLRVEIPL-------ARSSRPDGFG----EEALPRGLAGRRGRFVLE---- 121
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
VRGLP S SWQDLKDH R GDV FAEV +D + S G
Sbjct: 122 ----VRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDS----------------VMG 161
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR-NPWARGRITVKRYDRSP 224
V + + DM AI LD + FR + + RI+V R R+P
Sbjct: 162 KVSFFSKRDMMEAIEVLDGSTFRSHEGEKSRISV-REKRAP 201
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 45/201 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE ++E LF YGRI +I LK + FVEFE+ RDAEDA +G
Sbjct: 9 LYVGRLSHRTRERDLERLFSPYGRIREILLK-----SGFAFVEFEDTRDAEDACYELNGK 63
Query: 69 NFDGCRLRVELAHGGS-GRG--PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+ G R+ VE+A G GRG P R G+ ++G + ++Y
Sbjct: 64 DLLGDRIVVEMAKGTERGRGGLPMRGQRDKGW----------------MDKYGPFKRTDY 107
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
RVIV L + SWQDLKD MRK G +VC+A+ + +
Sbjct: 108 RVIVGNLSTRVSWQDLKDMMRKVGCEVCYADAHK--------------------HRKNEA 147
Query: 185 VVDYTNPEDMKYAIRKLDDTE 205
V+++ DMK AI+K D E
Sbjct: 148 VIEFATRSDMKRAIQKYDGHE 168
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 48/210 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGS------------GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR 116
G R+ VE G + S S + GGYG G G R
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGRWG-----------GRDR 107
Query: 117 FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFL 176
+G ++YR+IV L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 108 YGPPVRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRR--------------- 152
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ DMK A+ KLD TE
Sbjct: 153 -----NEGVIEFRQYSDMKRALEKLDGTEV 177
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
R+ +ELA GRG G Y A +G G R+G +E+R+I
Sbjct: 61 VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSG---GPSRYGPPVRTEHRII 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V + + R + GVV++
Sbjct: 118 VENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNE--------------------GVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD E
Sbjct: 158 ASYSDMKSALDKLDGVEL 175
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 31/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYEP--- 55
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N C RV + H RGP G GG + +G ++G +E+R+I
Sbjct: 56 NAKLCGERVIVEH---ARGPXXXXXXFSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLI 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 113 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 152
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 153 RSYSDMKRALDKLDGTEI 170
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA RG G + A R+G +EY++
Sbjct: 60 ELLGDRVSVELA-------------RGIRRGADYYRSRAASRSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ R GVV++
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHR--------------------LRRNEGVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD+T+
Sbjct: 147 ATYSDMKNALEKLDNTDL 164
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 45/202 (22%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S+ IY+G +P D + ++E F YGRI DI + + FVEFEN +DAED +
Sbjct: 3 SKRIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMN-----GFGFVEFENPKDAEDVVANF 57
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G N G + +ELA S +R GG+ G +R Y
Sbjct: 58 QGKNLLGEPIIIELAKE------SRRERGGGFEERGPRP--------------FTRRPGY 97
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RV++ G+ SWQDLKD R+AG V F+++ R++ G G+
Sbjct: 98 RVLIHGVSRDTSWQDLKDFGREAGAVTFSDLDRENPGE--------------------GI 137
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
++Y P+D++ A+R L++ E R
Sbjct: 138 LEYLTPDDLENALRLLNNRELR 159
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 96/203 (47%), Gaps = 46/203 (22%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G LP D+R EV F YGRI+D + + FVEFE++RDAEDA++
Sbjct: 1 MARRLYLGRLPPDVRSEEVSKFFDGYGRIVDCRVMT-----GFGFVEFESSRDAEDAMQN 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G NF G + VE A + RR Y A A R
Sbjct: 56 FNGKNFMGSNIVVEFAK-------ETRPRRDPYDADRAVRA--------------RRPPG 94
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
+RVIV G+ SWQDLKD R+AG V +A++ RD+ G G
Sbjct: 95 FRVIVSGISRDTSWQDLKDFGREAGSVSYADIDRDNPG--------------------EG 134
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
+++Y + ED + A++ LD + R
Sbjct: 135 ILEYLSREDSERAVKDLDGRDLR 157
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F +G+I DI LK Y FVEF+++RDA+DA+ +
Sbjct: 6 VFIGRLSHRARENDVERFFKGFGKIRDINLK-----NGYGFVEFDDSRDADDAVYEMNNR 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGA-------------GAG 115
+ G R+ VELA G R D R + G
Sbjct: 61 DLCGERVTVELARG-VPRSSGGRDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAIG 119
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
++G + YRVIV L + SWQDLKD++R+AG+V +A+ +
Sbjct: 120 KYGPPTRTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHK----------------- 162
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ GVVD+ +DMK AI KLD+TE
Sbjct: 163 ---HRRNEGVVDFATYDDMKRAIDKLDNTEI 190
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP DIR ++ED+FYKYG I DI+LK P + FVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 NFDGCRLRVEL 79
++DG RLRVE
Sbjct: 78 DYDGYRLRVEF 88
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 36/201 (17%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +Y G LP D RE ++E YGR+ +I +K+ Y FVEF++ RDA+D +
Sbjct: 4 STRVYFGRLPRDCRERDLEKFVRGYGRVREISMKLG-----YGFVEFDDYRDADDCVYDL 58
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G N G R+ VE R PS G G + + GR R +E+
Sbjct: 59 NGRNLLGERVVVE-----HSRNPSR-----GSDYGYRRDSSSRSRSSRRGRTPPIR-TEH 107
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+ V L S ++WQDLK++M K G+V FA+ + +G GV
Sbjct: 108 RLAVENLSSRSNWQDLKEYMGKVGEVTFADAHKRRQG--------------------EGV 147
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ +DMK A++KLDDTEF
Sbjct: 148 VEFATKDDMKTALKKLDDTEF 168
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 74/127 (58%), Gaps = 14/127 (11%)
Query: 16 SDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRL 75
SD+++ ++ED+FYKYGRI I++K P + F+EF++ RDA DA+ GRDGY+FDGCR+
Sbjct: 30 SDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRI 88
Query: 76 RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSS 135
RVEL G RGP YG G S YRVIV GLP +
Sbjct: 89 RVELTRGVGPRGPGGR---PLYGPDPRSPRRGPPPRR----------SGYRVIVSGLPDT 135
Query: 136 ASWQDLK 142
SWQDLK
Sbjct: 136 GSWQDLK 142
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F +GRI +I LK + FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ +E A G G + GG GG G G GG G + R+G +E+
Sbjct: 61 ELVGERVIIEHARGPARGRDEYRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPVRTEF 120
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R++V L S SWQDLKD+MR+AG+V FA+ + + G+
Sbjct: 121 RIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHK--------------------NEGI 160
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ DMK A+ KLD TE
Sbjct: 161 VEFATYSDMKNAVEKLDGTEI 181
>gi|194376808|dbj|BAG57550.1| unnamed protein product [Homo sapiens]
Length = 125
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+D+RE ++EDLFYKYGRI +IELK + FV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 NFDGCRLRVEL 79
++ CRLRVE
Sbjct: 76 DYGQCRLRVEF 86
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 42/186 (22%)
Query: 24 EDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGG 83
+D YG+IL+++LK Y FVEF++ RDA+DA+ +G + G R+ VE A
Sbjct: 15 QDNTMGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA--- 66
Query: 84 SGRGPSSSDRRGGYGGGGAGGAGGAGAG---AGAGRFGISRHSEYRVIVRGLPSSASWQD 140
RGP R G YG +G +G G +G ++G +EYR+IV L S SWQD
Sbjct: 67 --RGPR---RDGSYG------SGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQD 115
Query: 141 LKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRK 200
LKD+MR+AG+V +A+ + + GV+++ + DMK A+ K
Sbjct: 116 LKDYMRQAGEVTYADAHKGRK--------------------NEGVIEFVSYSDMKRALEK 155
Query: 201 LDDTEF 206
LD TE
Sbjct: 156 LDGTEV 161
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK Y FVEFE++RDA+DA+
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYEP--- 55
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
N C RV + H RGPS GG + +G ++G +E+R+I
Sbjct: 56 NAKLCGERVIVEH---ARGPSRE-----GSYSSGGGGYSSRRTSGRDKYGPPVRTEFRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 108 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 148 RSYSDMKRALDKLDGTEI 165
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E++D F +YG + +I + PP + FV+FE+ RDA+DAIR DG
Sbjct: 5 VYVGGLPRDATSREIQDGFNRYGHVSNI--WVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G R+RVELA GGS R GG G G G + ++YRV
Sbjct: 63 DFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDRGRNP-----PQRTDYRVR 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V LP W+++KD +R G+V + + D + ++
Sbjct: 118 VTDLPRDVDWRNVKDFLRTGGEVTYCNIEADGS----------------------AIAEF 155
Query: 189 TNPEDMKYAIRKLDDTEF 206
+DM+ AI+KLDDTEF
Sbjct: 156 QTKDDMEDAIKKLDDTEF 173
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 103/211 (48%), Gaps = 47/211 (22%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARD 57
MS S T +Y+GNLP + + ++E F +G I +++L + F+E+++ D
Sbjct: 1 MSNEVSNTRLYLGNLPPNATKADIEAHFATHGTGEITEVKLMH-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A D + DG +F G RL V+ A G R P GYG AGGA A R
Sbjct: 56 ARDVVP--DGSDFKGTRLTVQFARGPRPREPP------GYG------AGGAHHERAAPR- 100
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFL 176
R + +R+ + GLP+ SWQDLKD R+AG DV ++E +RDS
Sbjct: 101 --PRRTIHRMTITGLPNETSWQDLKDFARQAGPDVVYSETARDS---------------- 142
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G V+Y N D++ A+ KLD EF+
Sbjct: 143 -----GRGFVEYENANDLRTAVEKLDGFEFK 168
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 108/227 (47%), Gaps = 45/227 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE +GP RR G G R+G ++YR+I
Sbjct: 59 ELCGERVIVE-----HTKGP----RRDG-----GYSGRSGYGRWGRDRYGPPIRTDYRLI 104
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 105 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK--------------------NEGVIEF 144
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRS 235
DMK A+ KLD TE GR ++ + P R RS SRS
Sbjct: 145 RQYSDMKRALEKLDGTE-----VNGR-KIRLIEDRPGAKRRRSYSRS 185
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 34/159 (21%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G G R+ VE +GP RR G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVE-----HTKGP----RRDG-----GYSGR 1254
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
G R+G ++YR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 1255 SGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK----- 1309
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTE 205
GV+++ DMK A+ KLD TE
Sbjct: 1310 ---------------NEGVIEFRQYSDMKRALEKLDGTE 1333
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 26/198 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L++++K Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G R +GGG + + + G ++G +EYR+I
Sbjct: 59 ELCGERVIVEHARGPR-RDRDGYGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 118 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNQGVIEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD T+
Sbjct: 158 RSYSDMKRALDKLDGTDI 175
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 103/249 (41%), Gaps = 68/249 (27%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYC----------- 48
S ++VG L +RE ++E F KYGRI ++ +K + R C
Sbjct: 1 MSTRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVYGRDKSLCQRDLERFFRGY 60
Query: 49 -------------FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSS---SD 92
FVEF++ RDA+DA+ +G G R+ VE A G + RG D
Sbjct: 61 GRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARG-TPRGSDQWRYGD 119
Query: 93 RRGGYGGG---------------GAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSAS 137
RGGYG + R+G +EYR+ V L S S
Sbjct: 120 SRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVS 179
Query: 138 WQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYA 197
WQDLKD+MR+AG+V +A+ + GVV++ D+K A
Sbjct: 180 WQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEFATYSDLKNA 219
Query: 198 IRKLDDTEF 206
I KLDDTE
Sbjct: 220 IDKLDDTEL 228
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 89/194 (45%), Gaps = 47/194 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G LPS +VED F YGRILD +L + F+E EN RDA D + DG
Sbjct: 6 LFIGRLPSQAAREDVEDFFKGYGRILDCKLMN-----GFGFLELENPRDARDIVN--DGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE A G R + D GA ++ R + YR+I
Sbjct: 59 EFMGERIIVEPARGERRRRDTFRD--------------------GAAKYPRPRRTGYRLI 98
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L SWQDLKD MRKAG+ F + R+ G GVV++
Sbjct: 99 VENLAEDVSWQDLKDVMRKAGEPTFTDAHREQRG--------------------TGVVEF 138
Query: 189 TNPEDMKYAIRKLD 202
+ +DMK+A+ L+
Sbjct: 139 STEDDMKHALDTLN 152
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 38/198 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++RE ++E F +GRI +I +K + FVEF++ RDA+DA+ +G
Sbjct: 5 VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VELA RG G + A R+G +EY++
Sbjct: 60 ELLGDRVSVELA-------------RGIRRGADYYRSRAASRSPPRRRYGPPTRTEYQLT 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ R L N GVV++
Sbjct: 107 VENLSSRVSWQDLKDYMRQAGEVTYADAHR------------LRRN--------EGVVEF 146
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD+T+
Sbjct: 147 ATYSDMKNALDKLDNTDL 164
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 111/239 (46%), Gaps = 48/239 (20%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + +VE+ F ++G +I DI+L + F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A RGP + G + A R
Sbjct: 56 RDVVPAYHGTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR-- 97
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + YR+ + GLP + SWQDLKD R++G DV ++E RD EG
Sbjct: 98 -PRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR-------------- 141
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
G V++ D+K AI KLD EF+ ++ D P R RSRS R
Sbjct: 142 ------GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 194
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 39/198 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE +GP G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHT-----KGPRRD---------GGYSGRSGYGRWGRDRYGPPIRTDYRLI 104
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 105 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK--------------------NEGVIEF 144
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD TE
Sbjct: 145 RQYSDMKRALEKLDGTEV 162
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 104/237 (43%), Gaps = 62/237 (26%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +Y+G L RE +VE F YGR+ D+ LK Y FVEFE+ RDA+D
Sbjct: 236 MKNRMGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLK-----NGYGFVEFEDYRDADD 290
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ +G + G R+ VE A GG P DRR Y A + G G ++G
Sbjct: 291 AVYELNGKDLAGERVIVEHARGG----PRGDDRRNSYRDYPP--ARRSRGGGGRDKYGPP 344
Query: 121 RHSEYRVIVRGLPSSASWQ-------------------------------DLKDHMRKAG 149
+EYR+IV L S SWQ DLKD+MR+AG
Sbjct: 345 TRTEYRLIVENLSSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAG 404
Query: 150 DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+V +A+ ++ + G+V++ + DMK A+ KLD TE
Sbjct: 405 EVTYADAHKEHK--------------------NEGIVEFASYSDMKNAVSKLDGTEI 441
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 47/215 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F +GRI +I LK + FVEFE+ RDA+DA+ +G
Sbjct: 44 VYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGK 98
Query: 69 NFDGCRLRVELAHGGSGRGPSS--SDRRGGYGGGG---------------AGGAGGAGAG 111
G R+ +E A RGP+ + R GY G G GG G
Sbjct: 99 ELVGERVIIEHA-----RGPARGRDEYRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGS 153
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILL 171
+ R+G +E+R++V L S SWQDLKD+MR+AG+V FA+ + +
Sbjct: 154 RSSQRYGPPVRTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNE-------- 205
Query: 172 TLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
G+V++ DMK A+ KLD TE
Sbjct: 206 ------------GIVEFATYSDMKNAVEKLDGTEI 228
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 32/200 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++I+LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLKN-----GYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR--FGISRHSEYR 126
G R+ VE A RGP G G GG G + + + GR +G +EYR
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDFYGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYR 113
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
++V L S SWQDLKD MR+AG+V +A+ ++ GV+
Sbjct: 114 LVVENLSSRCSWQDLKDFMRQAGEVTYADAHKEHTN--------------------EGVI 153
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
++ + DMK A+ KLD T+
Sbjct: 154 EFRSYSDMKRALDKLDGTDI 173
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 33/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYVGKLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE G R GG G + G G G G R+G ++YR+I
Sbjct: 59 DLCGKRVIVEHTIG--------QRRDGGNRSGRSNRYGRGGGGGGGDRYGPPTRTDYRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ ++ + GV+++
Sbjct: 111 VENLSSRCSWQDLKDYMRQAGEVTYADTNKGRK--------------------NEGVIEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD TE
Sbjct: 151 RQYSDMKRALEKLDGTEV 168
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 97/205 (47%), Gaps = 44/205 (21%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGR--ILDIELKIPPRPPCYCFVEFENARDAEDAI 62
S +Y+G LP RE +V+ FY YGR I +I LK Y FVEF+ + DAEDA+
Sbjct: 1 MSNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILK-----DGYGFVEFDYSDDAEDAV 55
Query: 63 RGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
+G G R+ VE A G S +GGY G G A ++G
Sbjct: 56 YECNGKKMLGERILVEPARGTS---------KGGYSSGRRGRA--------RDKYGPPLR 98
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+ +R+ V L S SWQDLKD+ R+ GDV + + + +G
Sbjct: 99 TPWRMTVENLSSRVSWQDLKDYCRQIGDVTYGDAHKQKQG-------------------- 138
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFR 207
GV+++ +D+K A+RKLD E +
Sbjct: 139 EGVIEFATKKDLKKALRKLDGKELK 163
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 100/201 (49%), Gaps = 32/201 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++GNLP +RE ++E F +YGR+ +I +K Y F EF++ RDA+DA+ Y
Sbjct: 9 VFLGNLPYSVRERDIERFFERYGRVYNIFIKSGK----YGFCEFDDYRDADDAV-----Y 59
Query: 69 NFDGCRL---RVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+GC L R+ + H GR G GGGG G G G G++G + Y
Sbjct: 60 KLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKYGPPTRTNY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RVIV L + SWQDLKD MR+AG+V FA+ D GV
Sbjct: 120 RVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNE--------------------GV 159
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DM+ AI K D+ E
Sbjct: 160 VEFISRRDMERAIDKFDNHEL 180
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP RE ++E F YGR D+ +K Y FVEF++ RDA+DA+ Y
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAV-----Y 108
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L G S D R + R+G +EYR+
Sbjct: 109 ELNGKELL----------GESRDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLT 158
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 159 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNE--------------------GVVEF 198
Query: 189 TNPEDMKYAIRKLDDTEF 206
D+K AI KLDDTE
Sbjct: 199 ATYSDLKNAIDKLDDTEL 216
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 63/99 (63%), Gaps = 23/99 (23%)
Query: 111 GAGAGRFGI-SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMI 169
GA GR+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 2 GAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------- 51
Query: 170 LLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ EDM YA+RKLD+T+FR+
Sbjct: 52 -----------GT-GVVEFVRKEDMTYAVRKLDNTKFRS 78
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 90/209 (43%), Gaps = 59/209 (28%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y G LP D RE ++E F +GRI +I L+ Y FVEF++ RDAEDAI +G
Sbjct: 5 VYAGKLPHDTRERDLERFFEGFGRIREILLR-----RGYAFVEFDDYRDAEDAIYELNGA 59
Query: 69 NFDGCRLRVELA-----HGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G R+ VE GGS P R +
Sbjct: 60 KLLGQRIVVEATKRPPRFGGSSNRPKPPQR-----------------------------T 90
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
+R+IV L S W++LK +MRKAG+V FA+ RD
Sbjct: 91 YHRLIVENLSSRIDWRELKAYMRKAGNVTFADAHRDRMNE-------------------- 130
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWAR 212
GVV++ + DMK A++ DDTE + R
Sbjct: 131 GVVEFASRHDMKQALKMFDDTELNGRYIR 159
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 45/241 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L SDIRE ++E+ F YGRI +I LK Y FVEF+ RDA+DA+ +G
Sbjct: 6 VYVGQLTSDIRENDLENFFKGYGRIREITLK-----NGYGFVEFDERRDADDAVHDLNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG---------- 118
G ++RVE+AH S DR GGG G G R G
Sbjct: 61 PLLGEKIRVEMAHR------FSRDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVN 114
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCV 178
R S YR++V L S+ SW++LKD M +AG+VCF +V
Sbjct: 115 PPRRSRYRLLVENLSSAISWRELKDFMNQAGEVCFTDVYPQRRE---------------- 158
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSR 238
G+V++ + M+ A++KL+ E R RIT ++ D + S +R+R+ + +
Sbjct: 159 -----GIVEFESSSAMENALKKLNGEELNG--RRIRITEEKLDSNKS-NRNRNSVMGQQQ 210
Query: 239 S 239
S
Sbjct: 211 S 211
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP D+ + +V F +G + ++ K C FV + + R+A+DA+ +
Sbjct: 8 VYVGNLPLDVTKEQVGQFFSNWGEVTYVDFKQTKTGRC-AFVGYYDRREAQDAVMMMNSA 66
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RLRVE +G GP RG G + A G+ GI R +++RV
Sbjct: 67 VFHGRRLRVEFP---NGLGP-----RGRNGQPMSSMNSNARIRRPPGQ-GIQRRTDFRVQ 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEV 156
VRG+P + SWQD+KDH+R AG+V FA++
Sbjct: 118 VRGIPETGSWQDIKDHVRAAGEVVFADI 145
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 32/192 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP ++RE +VE F +YGRI ++ +K Y FVEF++ RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKFFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
F G R+RVE+A R P R G+ G+ +
Sbjct: 62 EFQGGRVRVEMA-----RDPRDRRGRDRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGN 116
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCF--AEVSRDSEG---------WQSP 166
+ YR+ V+ L S SWQDLKD+ R AGD+ + A R EG W +P
Sbjct: 117 PPGPKTNYRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPRQGEGVVEFASSQDWNTP 176
Query: 167 AMILLTLNFLCV 178
+ +++ V
Sbjct: 177 LTTKTSWSWMAV 188
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 95/204 (46%), Gaps = 32/204 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA + Y
Sbjct: 6 VYVGGLPHGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAP-TQTHY 59
Query: 69 NFDGCRLRVEL------AHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH 122
F RV + A GG R R GGG + R+G
Sbjct: 60 IFLLLIYRVTVEPARGTARGGGSRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLR 119
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+EYR+ V L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 120 TEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKNE------------------- 160
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ DMK AI KLDDTE
Sbjct: 161 -GVVEFATSSDMKTAIDKLDDTEL 183
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H R GGG G G+ + R +E R+I
Sbjct: 61 EL--CNERVTIEHARVR---LRGGRGRRPGGGRFSDRYGRGSQSSRSRNPPPVRTENRLI 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 116 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 155
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K A+ KL E
Sbjct: 156 ASYSDLKNALEKLSGKEM 173
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 112/239 (46%), Gaps = 50/239 (20%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + +VE+ F ++G +I DI+L + F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A RGP + G + A R
Sbjct: 56 RDVVP--DGTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR-- 95
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + YR+ + GLP + SWQDLKD R++G DV ++E RD EG
Sbjct: 96 -PRRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEGR-------------- 139
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
G V++ D+K AI KLD EF+ ++ D P R RSRS R
Sbjct: 140 ------GFVEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 192
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 14/152 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP+D ++ D+F KY D++LK + F+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSDIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG R+G ++Y+++
Sbjct: 74 TFRGRRISVEVA-----RGPRTADKYRFKGGLNHEPV----QATWVKRYGTPEITKYKIL 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
V+ L + WQDLKD M+KAG V +A +++
Sbjct: 125 VKNLSTRIEWQDLKDLMKKAGTVTYALAHKNN 156
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H S R G GG GG G + + R+G +E+R+I
Sbjct: 61 EL--CSERVTIEHARSRR--GRGGGPGMGRFGGGGGGGYRPSRSSGPRYGPPVRTEHRLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V F + R ++ GVV++
Sbjct: 117 VENLSSRISWQDLKDMMRKAGEVTFVDAHRPNK--------------------NEGVVEF 156
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI K D TE
Sbjct: 157 ASRSDMKSAISKFDGTEL 174
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H R R GG GGG G G+ R +E R+I
Sbjct: 61 EL--CNERVTIEHA-RVRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLI 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 118 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K A+ KL E
Sbjct: 158 ASHSDLKNALDKLSGKEI 175
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 30/203 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L++++K Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHG-----GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G R+ VE A G G SS G + + + G ++G +
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRT 118
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
EYR+IV L S SWQDLKD MR+AG+V +A+ ++
Sbjct: 119 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNQ 158
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD T+
Sbjct: 159 GVIEFRSYSDMKRALDKLDGTDI 181
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
R+ +E A GRG GG G A G R+G +E+R+I
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRII 120
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V + + R + GVV++
Sbjct: 121 VENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNE--------------------GVVEF 160
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD E
Sbjct: 161 ASYTDMKNALDKLDGVEL 178
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 103/198 (52%), Gaps = 24/198 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++GNLP +RE ++E F +YGR+ +I +K Y F EF++ RDA+DA+ +G
Sbjct: 9 VFLGNLPYSVRERDIERFFERYGRVYNIFIKSGK----YGFCEFDDYRDADDAVYKLNGC 64
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ R+ VE A GG SS GG GGGG G G G G G++G + YRVI
Sbjct: 65 ELNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPPTRTNYRVI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L + SWQDLKD MR+AG+V FA+ D GVV++
Sbjct: 125 VENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNE--------------------GVVEF 164
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DM+ AI K D+ E
Sbjct: 165 ISRRDMERAIDKFDNHEL 182
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 23/95 (24%)
Query: 115 GRFGI-SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTL 173
GR+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 39 GRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------------- 84
Query: 174 NFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ EDM YA+RKLD+T+FR+
Sbjct: 85 -------GT-GVVEFVRKEDMTYAVRKLDNTKFRS 111
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 96/216 (44%), Gaps = 49/216 (22%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELK-------------IPPRPPCYCFVE 51
+R +Y+G LP D R +V F YGRI+D + + + FVE
Sbjct: 1 MARRLYLGRLPPDARSDDVAKFFDGYGRIVDCRVMTGSSDKRRSANPGLTAPSSGFGFVE 60
Query: 52 FENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAG 111
FEN++DAEDA+ +G F G + VE A S RR Y GGG G G A +
Sbjct: 61 FENSKDAEDAVHHFNGKPFMGVNIVVEFAK-------ESRPRRDVYEGGGERGFGSARS- 112
Query: 112 AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILL 171
R R+IV G+ SWQDLKD R+AG V FA++ RD G
Sbjct: 113 --------RRPPGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFPGQ-------- 156
Query: 172 TLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G+++Y + +D A++ LD + R
Sbjct: 157 ------------GILEYLSRDDADRAVKDLDGKDLR 180
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M G R +Y+GN+ D RE +VE F YG++ ++ LK Y FVEFE+ RDA+D
Sbjct: 1 MPGNHHR-LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADD 54
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ DG + +G R+RVE A R P R Y G R
Sbjct: 55 AVQDLDGKDMNGSRVRVEFA-----RSPREK-RNSRY--QSRRSPPRGRRGPPMKRNPPG 106
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCF--AEVSRDSEGWQSPAMILLTLNFLCV 178
R ++YR+ V L + SWQDLKD+ R G++ + A R++E
Sbjct: 107 RRTQYRIRVENLSTRTSWQDLKDYFRSCGEITYTNAHKPRNNE----------------- 149
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + M+ A+ +LDDT+
Sbjct: 150 -----GVVEFGDKRAMENALDRLDDTDL 172
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 23/95 (24%)
Query: 115 GRFGI-SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTL 173
GR+G SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 5 GRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------------- 50
Query: 174 NFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ EDM YA+RKLD+T+FR+
Sbjct: 51 -------GT-GVVEFVRKEDMTYAVRKLDNTKFRS 77
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 101/245 (41%), Gaps = 75/245 (30%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G++ ++++G LP +R +++D F YGRI+DI +K Y FVEFE+ RDA DA+
Sbjct: 2 GKYGFSVWMGGLPERVRSRDIDDFFKGYGRIVDISIKTK-----YAFVEFEDERDAADAV 56
Query: 63 RGRDGYNFDGCRLRVELAHG------------------------------------GSGR 86
+ D +G R+R+E++ G G GR
Sbjct: 57 KDLDDQKLNGSRVRLEVSKGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGR 116
Query: 87 GPS-----SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDL 141
S SDRR + A ++G + + V V L S SWQDL
Sbjct: 117 SRSRSPARGSDRRETFYSKPA-----------YKKYGAPEKTRWTVEVDNLSSRCSWQDL 165
Query: 142 KDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKL 201
KD MRKAG+V + + G GVV Y +D K AI +L
Sbjct: 166 KDFMRKAGEVTYGDAHGSDIG------------------RNRGVVCYEREDDAKRAIEEL 207
Query: 202 DDTEF 206
D EF
Sbjct: 208 DGREF 212
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 94/212 (44%), Gaps = 54/212 (25%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDG---CRLRVELAHGGSGRGPSSSD-----------RRGGYGGGGAGGAGGAGAGAGA 114
+G C RV + H + RG R Y +GG
Sbjct: 56 ELNGKVLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGP--------- 106
Query: 115 GRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLN 174
R+G +E+R+IV L S SWQDLKD MRKAG+V + + R +
Sbjct: 107 -RYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNE----------- 154
Query: 175 FLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + DMK A+ KLD E
Sbjct: 155 ---------GVVEFASYTDMKNALDKLDGVEL 177
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 93/203 (45%), Gaps = 44/203 (21%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP D R +V+ F +GRI+D + + FVEFE+ +DAE+A+
Sbjct: 1 MSRRLYLGRLPPDARSEDVQKFFDGFGRIIDCRVMT-----GFGFVEFESPKDAEEAVHT 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G +F G + VE A S RR Y G G A R
Sbjct: 56 FNGKSFMGANIVVEFAK-------ESRPRREPY-------ENERGHGPRA-----RRPPG 96
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R++V G+ SWQDLKD R AG V FA++ R+S G G
Sbjct: 97 IRLVVTGVSRDTSWQDLKDFGRDAGSVSFADIDRESPGQ--------------------G 136
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++Y N ED A+R+LD E R
Sbjct: 137 VLEYLNREDADRAVRELDGKELR 159
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M R +++GNLP +RE ++E F +YGR+ +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGSRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A+ +G +G R+ VE H GR G GG G R
Sbjct: 57 AVYKLNGGELNGERITVE--HARGGRRAEGRGGGFRGDRNRGRGVGGRGKYGPPTR---- 110
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ YRVIV L S SWQDLKD MR+AG+V FA+ D
Sbjct: 111 --TNYRVIVENLSSRVSWQDLKDVMRRAGEVTFADAHNDRRNE----------------- 151
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ + DM AI K D+ E +
Sbjct: 152 ---GVVEFISRRDMDRAIEKFDNHELQ 175
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP+D + D+F KY D++LK + F+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSGIRDIFSKYRDRFDMKLKTR-----FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG R+G ++Y+++
Sbjct: 74 TFRGRRISVEVA-----RGPRTADKYRFKGGLNHEPV----QATWVKRYGTPEITKYKIL 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
V+ L + WQDLKD M+KAG V +A +++
Sbjct: 125 VKNLSTRIEWQDLKDLMKKAGTVTYALAHKNN 156
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 22/89 (24%)
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
+R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG------------------- 51
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 52 ---MGMVEYLRKEDMEYALRKLDDTKFRS 77
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 18/152 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y + +G+ R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFAQRFSYY-----------SQSGSSRYGPPVRTEHRII 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
V L S SWQDLKD MRKAG+V + + R++
Sbjct: 108 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNN 139
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 73/162 (45%), Gaps = 39/162 (24%)
Query: 46 CYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA 105
CY FVEFE R AEDA+ R GY + G LRVE + RR G
Sbjct: 73 CYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFT--------AQPARRLGSNPNFIPMG 124
Query: 106 GGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQS 165
G +G R + +R +V LP WQ LKDHMR+AG V FAE
Sbjct: 125 GASGP---------PRRTGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAE---------- 165
Query: 166 PAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
V S GVV++ + ED+KYA+R LD +E R
Sbjct: 166 ------------VLSHGRGVVEFEHAEDLKYAVRSLDKSEMR 195
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDG---CRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G C RV + H + RG GG G A G R+G +E+
Sbjct: 56 ELNGKVLCSERVTIEHARNHRGRGGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEH 115
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLK MRKAG+V + + R + GV
Sbjct: 116 RIIVENLSSRVSWQDLKGFMRKAGEVTYVDAHRSNRNE--------------------GV 155
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + DMK A+ KLD E
Sbjct: 156 VEFASYTDMKSALDKLDGVEL 176
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 91/197 (46%), Gaps = 60/197 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ Y
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAV-----Y 53
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ +G L GYG G G R+G ++YR+I
Sbjct: 54 DLNGKEL-------------------CGYGRWG-----------GRDRYGPPVRTDYRLI 83
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GV+++
Sbjct: 84 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRR--------------------NEGVIEF 123
Query: 189 TNPEDMKYAIRKLDDTE 205
DMK A+ KLD TE
Sbjct: 124 RQYSDMKRALEKLDGTE 140
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 31/169 (18%)
Query: 38 LKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGY 97
L++ P Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G
Sbjct: 18 LEVLHPAPRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGS 68
Query: 98 GGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVS 157
G G G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+
Sbjct: 69 YGSGRSGYGYRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAH 126
Query: 158 RDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ + GV+++ + DMK A+ KLD TE
Sbjct: 127 KGRK--------------------NEGVIEFVSYSDMKRALEKLDGTEV 155
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 90/203 (44%), Gaps = 47/203 (23%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +Y+G LP+D R +V F YG+I+D + + FVEFE++RDAEDA+
Sbjct: 1 MSRRLYLGRLPTDARTDDVSKFFEGYGKIVDCRVMT-----GFGFVEFESSRDAEDALNH 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G L VE A R DR A R R
Sbjct: 56 FNGKPFMGTNLVVEFAKESRPRRDPYDDR------------------APRAR----RPPG 93
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+IV G+ SWQDLKD R+AG V FA++ RD G G
Sbjct: 94 IRIIVSGISRDTSWQDLKDFGREAGSVSFADIERDVPG--------------------QG 133
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++Y ED + A++ LD + R
Sbjct: 134 VLEYLAREDAERAVKDLDGKDLR 156
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 41/201 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
I+VG L + R ++E+ F G R+ D+ +K+ Y FVEFE+ RDA+DA+ D
Sbjct: 12 IFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDKRDADDAVYELD 66
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDR-RGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
F G R+ VE A G + G + +R RGGY + G GR ++E+
Sbjct: 67 RKEFFGSRITVEHATGTARGGDTRGERDRGGY----------SVRERGRGR---PYNTEW 113
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S W DLKD+ R AG+V F + +++ G GV
Sbjct: 114 RLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG--------------------EGV 153
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + +MK A++K D +EF
Sbjct: 154 VEFRSYREMKRALKKFDGSEF 174
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 97/200 (48%), Gaps = 27/200 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLP ++RE +VE LF +YGRI ++ +K Y FVEF++ RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKLFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG--ISRHSEYR 126
F G R+RVE+A R DR GGG GG GR G + YR
Sbjct: 62 EFQGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYR 121
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+ V+ L S SWQDLKD+ R AG++ + +G GVV
Sbjct: 122 ITVQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQGE--------------------GVV 161
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
++ + + YAI D+ E
Sbjct: 162 EFASSRGLDYAIDHQDELEL 181
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP ++RE +VE +GRI ++ +K Y FVEF++ RDA+D + DG
Sbjct: 7 VYIGNLPENVRERDVEKFLKDHGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+F G R+RVE+A R G GG + + YRV+
Sbjct: 62 DFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGNPPGPK------TNYRVV 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCF--AEVSRDSEG 162
V L S SWQDLKD+ R AGD+ + A R EG
Sbjct: 116 VENLSSRTSWQDLKDYFRAAGDITYTNAHTPRQGEG 151
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 41/209 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F +G + ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 5 VYIGRLSYQTRERDVERFFRGFGHLREVNLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDR-RGGYGGG----------GAGGAGGAGAGAGAGRF 117
+ G R+ +E A RGP DR GGY G G G G G G ++
Sbjct: 60 DLCGERVIIEHA-----RGPVRRDRDSGGYRGSERDYRGDRGGGYGPPRRRGGGGGIDKY 114
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
G ++ R+IV L S SWQDLKD+MR+AG+V +A+ ++ +
Sbjct: 115 GPPTRTDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHK---------------- 158
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ DMK A+ KLD TE
Sbjct: 159 ----NEGVVEFATYSDMKNAMSKLDGTEI 183
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 54/266 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGTGKITEIKLMN-----GFGFIEYEDAMDARDIVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRG--PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G RL V+ A G + P +DR R +
Sbjct: 64 GSDFKGERLTVQFARGPRRKENFPVPTDRPN---------------------LPRPRRTI 102
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
+R+I+ GLP + SWQDLKD R++G DV ++E R+
Sbjct: 103 FRMIISGLPET-SWQDLKDFARQSGLDVVYSETGREP---------------------GR 140
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVR 243
G+V++ D+K A+ KLD EF+ ++ YD P R RSRS R +
Sbjct: 141 GIVEFETANDLKTAVEKLDGREFKGTRVTCVPDIQPYDDRPYRDPYRSRSPRRGYPPMDE 200
Query: 244 RNRSKSLERSVS-RSVSRSMSASPVK 268
+R S+ R S RS R S P++
Sbjct: 201 YDRRYSVPRGYSPRSHYRERSPIPMR 226
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
Length = 1100
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 52/242 (21%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + ++E+ F + G+I +I+L + F+E+E+A DA
Sbjct: 796 MSEVSSTRLYLGNLPRNVTKKDIEEYFGSHGTGKITEIKLMN-----GFGFIEYEDAMDA 850
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A RGP + G A R
Sbjct: 851 RDVVPAFHGSDFKGERLTVQFA-----RGPRHKET-----------FNGPSDRPAAPR-- 892
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + +R+ V GLP+ SWQDLKD R++G DV ++E +R+ +G
Sbjct: 893 -PRRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDG--------------- 936
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
G V++ + D+K A+ KLD E +G D P+ R+ R RS
Sbjct: 937 -----RGFVEFESHADLKTAVEKLDGREL-----KGSQVTCVADVQPAEERAPYRDPYRS 986
Query: 238 RS 239
RS
Sbjct: 987 RS 988
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 100/201 (49%), Gaps = 28/201 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 5 VYIGRLPYHAREKDVERFFRGYGRIREINLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGG---GGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A G + G GY G+GG R+G ++Y
Sbjct: 60 ELCGERVIVENARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDY 119
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD+MR+AG+V +A+ + ++ G+
Sbjct: 120 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKQNK--------------------NEGI 159
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ DM+ A+RKLD TE
Sbjct: 160 VEFATYRDMENALRKLDGTEI 180
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 71/199 (35%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP ++ + E+E +F Y + E+ + R + FVEF+N DA+DAI
Sbjct: 188 VYLGNLPVNVSKSEIESVFKNYNPV---EVTLKER---FGFVEFDNKVDADDAIHD---- 237
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
HG G S +R YRV+
Sbjct: 238 -----------LHGTKVSGSSREER------------------------------SYRVV 256
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
++ LP +WQD+KD MRKAG V FA+V +D +G GVV++
Sbjct: 257 IKNLPPRTTWQDVKDFMRKAGRVVFADVLKDCDG--------------------EGVVEF 296
Query: 189 TNPEDMKYAIRKLDDTEFR 207
+DMKYA+R+LDD +
Sbjct: 297 AQYDDMKYALRELDDKKLN 315
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++
Sbjct: 115 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAK--------------------NDGIVEF 154
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 155 AAYADMKEAIEKFDGYEL 172
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++
Sbjct: 115 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAK--------------------NDGIVEF 154
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 155 AAYADMKEAIEKFDGYEL 172
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 22/89 (24%)
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------------------- 88
Query: 180 SGTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GT GVV++ EDM YA+RKLD+T+FR+
Sbjct: 89 -GT-GVVEFVRKEDMTYAVRKLDNTKFRS 115
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRI 33
IYVGNLP DIR ++ED+FYKYG I
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAI 42
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++
Sbjct: 115 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAK--------------------NDGIVEF 154
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 155 AAYADMKEAIEKFDGYEL 172
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 47/202 (23%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S+ +YVGNL + ++ LF ++G I DI +K + Y FVEF +A++A
Sbjct: 1 MSKRLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSS 60
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+ +F G +RVE G Y G + R G R ++
Sbjct: 61 LNSTHFMGRDIRVEYTRGLR------------YSTGDSI------------RRGPPRRTD 96
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
YR+ V LP + SWQDLKD+M + G V + ++ YG
Sbjct: 97 YRIEVTHLPHNCSWQDLKDYMSRIGPVGYCDIRH-----------------------GYG 133
Query: 185 VVDYTNPEDMKYAIRKLDDTEF 206
VV++ + EDMK A+RKLDDT+
Sbjct: 134 VVEFIHYEDMKRAVRKLDDTKM 155
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A R P + GGG GG GG G G+G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHA-----RLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRYGPPTRTEYRVI 113
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD RKAG+V +A+ + ++ G+V++
Sbjct: 114 VENLSSRVSWQDLKDLTRKAGEVTYADAHKSAK--------------------NDGIVEF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 154 AAYADMKEAIEKFDGYEL 171
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 26/198 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP ++E ++E F YG++ ++ +K Y FVEFE+ RDA+DA+ +G
Sbjct: 5 VYIGGLPYRVKERDIERFFRGYGKLREVLIK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G RG + G+ + A R+G ++YR++
Sbjct: 60 ELCGERVSVEHARGSGRRGGRDDRNDRDHRDRGSRRSNWMDNNAPP-RYGPPTRTDYRLV 118
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GVV++
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQHR--------------------NEGVVEF 158
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K AI KLD T+
Sbjct: 159 ASYSDLKTAIEKLDGTDL 176
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 44/210 (20%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAE 59
M+ +S T +Y+GNL D R+ EVED F ++G +E+K+ + F+++++ DA+
Sbjct: 1 MANEYSGTRLYLGNLHKDARKQEVEDFFKEHGSGNVVEIKLMN---GFGFIQYDSEADAK 57
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR-FG 118
D + G +F G L V+ A G S P D GG A R F
Sbjct: 58 DVVPAYHGRDFKGQPLTVQFARG-SRHNPRHHDFPGG-----------------ADRTFP 99
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + +R+ + GL SWQDLKD RK+G DV F+EV+R+ +G
Sbjct: 100 RPRRTAFRMNISGLNPDTSWQDLKDFARKSGSDVVFSEVTRERDGR-------------- 145
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G+V++ +D++ A+ LD TEF+
Sbjct: 146 ------GMVEFETHDDLRRAVAFLDRTEFK 169
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 50/222 (22%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAE 59
M+ S T +Y+GNLP + + +VE F +G E+K+ + F+E+++ DA+
Sbjct: 1 MTTEVSSTRLYLGNLPRNATKSDVEAHFATHGTGEITEVKLMN---GFGFIEYKDPMDAQ 57
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
D + DG NF G RL V+ AHG R GG+G
Sbjct: 58 DVVP--DGSNFMGERLTVQFAHG-------PRHREGGFGNHERAAPR------------- 95
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCV 178
R + +R+ + GLP+ SWQDLKD R++ DV ++E RDS G
Sbjct: 96 PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG---------------- 139
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEF---RNPWARGRITV 217
G V++ D++ A+ KLD EF RN R R+++
Sbjct: 140 ----RGFVEFETAADLRTAVEKLDGREFKGQRNMLTRSRLSL 177
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 58/198 (29%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++L+++LK Y FVEFE+ RDA+DA+ Y
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDLK-----NGYGFVEFEDTRDADDAV-----Y 53
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L G SS R G ++G +EYR+I
Sbjct: 54 ELNGKEL----------CGYSSRSR------------------TGRDKYGPPVRTEYRLI 85
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 86 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RANEGVIEF 125
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DM+ A+ KLD T+
Sbjct: 126 RSYSDMRRALEKLDGTDI 143
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G GG G G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGG-----------GGRSGYGRWGGRDRYGPPVRTDYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRR--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ KLD TE
Sbjct: 148 RQYSDMKRALEKLDGTEV 165
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 34/202 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L +RE +++ F YG++++ +LK Y FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGKLSYHVREKDIQRFFGGYGKLMETDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGP----SSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G R+ VE A RGP G GG + + + +G ++G +E
Sbjct: 59 ELCGERVIVEHA-----RGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTE 113
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
YR+IV L S SWQDLKD MR+AG+V +A+ ++ G
Sbjct: 114 YRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEG 153
Query: 185 VVDYTNPEDMKYAIRKLDDTEF 206
V+++ + DM+ A+ KLD T+
Sbjct: 154 VIEFRSHSDMRRALDKLDVTDI 175
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 37/166 (22%)
Query: 44 PPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAG 103
P Y FVEF++ RDA+DA+ +G + G R+ VE A RGP R G YG
Sbjct: 23 PVWYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDGSYG----- 69
Query: 104 GAGGAGAG---AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDS 160
+G +G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 70 -SGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR 128
Query: 161 EGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ GV+++ + DMK A+ KLD TE
Sbjct: 129 K--------------------NEGVIEFVSYSDMKRALEKLDGTEV 154
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 93/203 (45%), Gaps = 32/203 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VG L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFVGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHG-----GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
C RV + H G GG GGG G G+ R +
Sbjct: 61 EL--CNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPPMRT 118
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 119 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NE 158
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K A+ KL E
Sbjct: 159 GVVEFASYSDLKNALEKLSGKEI 181
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G G
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGYG 87
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 88 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK----- 140
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 141 ---------------NEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 36/197 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G GG G G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGG-----------GGRSGYGRWGGRDRYGPPVRTDYRLI 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + GV+++
Sbjct: 108 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRR--------------------NEGVIEF 147
Query: 189 TNPEDMKYAIRKLDDTE 205
DMK A+ KLD TE
Sbjct: 148 RQYSDMKRALEKLDGTE 164
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 60/198 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L S+R + +G R+G +++R++
Sbjct: 56 ELNGKEL--------------CSER----------------SLSGPNRYGPPVRTDHRLV 85
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V F + R ++ GVV++
Sbjct: 86 VENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTK--------------------NEGVVEF 125
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI KLD TE
Sbjct: 126 ASRSDMKNAISKLDGTEL 143
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G G
Sbjct: 32 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGYG 82
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 83 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK----- 135
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 136 ---------------NEGVIEFVSYSDMKRALEKLDGTEV 160
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 113/229 (49%), Gaps = 41/229 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L S +RE +VE F YG++ ++ LK + FVEF+++RDAEDA+ +
Sbjct: 4 VYLGRLNSSVRERDVEKFFRDYGKLKEVTLK-----GTFGFVEFDDSRDAEDAVYDLNNK 58
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
G R+ VE A GRG D R G GG GG G G AG ++Y
Sbjct: 59 ELCGDRIIVEFARNRREARGRG----DDRYGRSRGGRSSGGGGGGGPAAGYGSAPVRTDY 114
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGD--VCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
R+ + L S SWQDLKD++R D V +A+ + S G
Sbjct: 115 RLYINNLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVGQ-------------------- 154
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKR---YDRSPSRSRS 229
+V++ + +D++YAI+KLD+TE +ITV R RSP SRS
Sbjct: 155 AIVEFDSKDDLRYAIKKLDNTEINGK----KITVSRDGGDSRSPIASRS 199
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A P + GGGG GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHAR----LPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVI 114
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQ+LKD MRKAG+V +A+ + ++ G+V++
Sbjct: 115 VENLSSRVSWQELKDLMRKAGEVTYADAHKSAK--------------------NDGIVEF 154
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 155 AAYADMKEAIEKFDGYEL 172
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 98/198 (49%), Gaps = 33/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A R P + G GG GG G G+G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHA-----RLPPGT---RGGSRRAGGGGGGGGGGSGRDRYGPPTRTEYRVI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++
Sbjct: 111 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAK--------------------NDGIVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 151 AAYADMKEAIEKFDGYEL 168
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 100/198 (50%), Gaps = 29/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H S RG G +GGGG GG GG G G + +E+R+I
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGGGYRYGPPVR--TEHRLI 116
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V F + R ++ GVV++
Sbjct: 117 VENLSSRISWQDLKDMMRKAGEVTFVDAHRPNK--------------------NEGVVEF 156
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK AI K D TE
Sbjct: 157 ASRSDMKSAISKFDGTEL 174
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 95/201 (47%), Gaps = 38/201 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAG---RFGISRHSEY 125
C RV + H R G G G GG A G G+ R +E
Sbjct: 61 EL--CNERVTIEHARV--------RLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTEN 110
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV L S SWQDLKD MR+AG+V FA+ R + LN GV
Sbjct: 111 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPN------------LN--------EGV 150
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + D+K A+ KL E
Sbjct: 151 VEFASHSDLKNALEKLSGKEI 171
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 51/232 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G R + +R
Sbjct: 64 GSDFMGERLTVQFARGARHR------------------EGGPGFTHERNSQPRPRRTPHR 105
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G G
Sbjct: 106 MQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNGE--------------------GF 145
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
V++ N D++ A+ KLD+ EF +G+ + P R+ R+RSRS
Sbjct: 146 VEFENAADLRTAVEKLDNREF-----KGQRVTCVANTQPDIPRNDHRARSRS 192
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 90/202 (44%), Gaps = 47/202 (23%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+R +Y+G LP D R +V F YG I+D + + FVEFE+ RDAEDA+
Sbjct: 3 ARRLYLGRLPPDTRSEDVSKFFDGYGHIVDCRVMT-----GFGFVEFESTRDAEDALNHF 57
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G F+G + +E A S RR Y A R R
Sbjct: 58 NGKPFNGANIVIEFAK-------ESRPRRDVYE---------------ADRPRARRPPGI 95
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+IV G+ SWQDLKD R+AG+V +A++ RD G G+
Sbjct: 96 RLIVSGVSRDTSWQDLKDFGREAGNVSYADIDRDHPGE--------------------GI 135
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
++Y ED A+R+LD + R
Sbjct: 136 LEYLTREDADRAVRELDGKDLR 157
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 98/198 (49%), Gaps = 32/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG +P E ++E F YGR+ DI LK Y FVEF+N +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G RL VE A R P + RGG G GG GG G R+G +EYRVI
Sbjct: 59 DLRGERLIVEHA-----RLPPGT--RGGSRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVI 111
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V +A+ + ++ G+V++
Sbjct: 112 VENLSSRVSWQDLKDLMRKAGEVTYADAHKSAK--------------------NDGIVEF 151
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK AI K D E
Sbjct: 152 AAYADMKEAIEKFDGYEL 169
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 41/228 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + EVE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNVTKAEVEGHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G + R GG GG A R R +++R
Sbjct: 62 GSDFMGERLTVQFARG-------TRHRDGGAAPGGFNNNNNTHNERAAPR---PRRTQHR 111
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E RD G G
Sbjct: 112 MQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNGR--------------------GF 151
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V++ D++ A+ KLD EF+ + + D P +R RSRS
Sbjct: 152 VEFETAADLRTAVEKLDGREFKGKPVNC-VADTQPDIPPRDNRGRSRS 198
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 31/161 (19%)
Query: 46 CYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGA 105
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G
Sbjct: 5 AYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGY 55
Query: 106 GGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQS 165
G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 56 GYRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK---- 109
Query: 166 PAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 110 ----------------NEGVIEFVSYSDMKRALEKLDGTEV 134
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 51/232 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G R + +R
Sbjct: 64 GSDFMGERLTVQFARGARHR------------------EGGPGFTHERNSQPRPRRTPHR 105
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G G
Sbjct: 106 MQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNGE--------------------GF 145
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
V++ N D++ A+ KLD+ EF +G+ + P R+ R+RSRS
Sbjct: 146 VEFENAADLRTAVEKLDNREF-----KGQRVTCVANTQPDIPRNDHRARSRS 192
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGG-------------YGGGGAGGAGGAGAGAGAG 115
C RV + H S RG GG + G G G G G+
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSS 118
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNF 175
R+G +E+R+IV L S SWQDLKD MRKAG+V F + R ++
Sbjct: 119 RYGPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNK-------------- 164
Query: 176 LCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + DMK AI KLD T+
Sbjct: 165 ------NEGVVEFASHSDMKNAIDKLDGTDL 189
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 43/202 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
I+VG L + R ++E+ F G R+ D+ +K+ Y FVEFE+ RDA+DA+ D
Sbjct: 12 IFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDKRDADDAVYELD 66
Query: 67 GYNFDGCRLRVELAHGG--SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F G RL VE A G + DRR G+ G GR ++E
Sbjct: 67 RKEFFGSRLTVEHAKHGPRADMDKRDGDRRKGHEN-----------DRGRGR---PYNTE 112
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
+R+IV L S W DLKD+ R AG+V F + +++ G G
Sbjct: 113 WRLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG--------------------EG 152
Query: 185 VVDYTNPEDMKYAIRKLDDTEF 206
VV++ + +MK A++K D +EF
Sbjct: 153 VVEFRSYREMKRALKKFDGSEF 174
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G G
Sbjct: 22 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDGSYGSGRSGYG 72
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 73 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK----- 125
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 126 ---------------NEGVIEFVSYSDMKRALEKLDGTEV 150
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 86/198 (43%), Gaps = 46/198 (23%)
Query: 30 YGRI--LDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRG 87
+GRI +DI+L Y FV + + +DAE AI RDGY FDG RLRVE SG
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEF----SGEN 56
Query: 88 PSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRK 147
S G Y G G +E+R+IV LP + WQ LKD MR+
Sbjct: 57 KSF----GKYRRKEDG-------------IGPPLRTEHRIIVSNLPDNCKWQHLKDIMRQ 99
Query: 148 AGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GDV +A + G+V++ + + M YAI K D EF+
Sbjct: 100 CGDVGYANIEHGK-----------------------GIVEFVDRDGMLYAIEKFDRAEFK 136
Query: 208 NPWARGRITVKRYDRSPS 225
I V+R RS S
Sbjct: 137 VHDQVTNIKVRRDKRSLS 154
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 31/160 (19%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP RR G G G G
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGP----RRDSSYGSGRSGYG 56
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 57 YRRSGRD--KYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK----- 109
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 110 ---------------NEGVIEFKSYSDMKRALEKLDGTEV 134
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVG L E ++E F YGRI DI LK + FVEF++ RDA+DA+
Sbjct: 4 MSARVYVGRLSYRASERDIEHFFRGYGRIRDIVLK-----NGFGFVEFDDPRDADDAVYE 58
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G G R+ +E + RGP S R G+GG R+G + +
Sbjct: 59 LNGKELCGERVILEFSR----RGPRS---RMGFGGFDR-----FPPPRRESRYGPPQQTR 106
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
YR+IV L S SWQDLKD MR AG+V FA+ + Q P G
Sbjct: 107 YRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHK-----QHP---------------NEG 146
Query: 185 VVDYTNPEDMKYAIRKLDDTE 205
+V + +D++ A+ KL E
Sbjct: 147 IVCFLTRDDLERALDKLQGKE 167
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 46/229 (20%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +Y+G +P + ++E F +YG +LD+ + + F+E++ RDAEDA+ +
Sbjct: 6 RRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIM-----AGFGFLEYDQVRDAEDAVHDLN 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL VE A + P G G G G G R S +R
Sbjct: 61 GREFMGDRLIVEFA-----KAPRGGRE-----------MYGGGGGGSYGGGGGPRRSGFR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
+IV+G+ SWQDLKD R+AG+V A+V R+ G G++
Sbjct: 105 LIVKGISHETSWQDLKDFARQAGNVIRADVDRNMPG--------------------EGLI 144
Query: 187 DYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRS 235
+Y++ +D A+RKLD T+ +G + DR R RSRS S
Sbjct: 145 EYSSQDDADNALRKLDGTDL-----KGMVVTLFEDRPGGGRRDRSRSPS 188
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G L RE +VE F YGRI DI+LK + FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H R + GG G G+ +G R +E R+I
Sbjct: 61 EL--CNERVTIEHARVR---LRGGRGRTWTGGRFSDRYGRGSQSGRSRNPPPVRTENRLI 115
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSR 158
V L S SWQDLKD MR+AG+V FA+ R
Sbjct: 116 VENLSSRVSWQDLKDFMRQAGEVTFADAHR 145
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 31/160 (19%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP R G YG +G +G
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDGSYG---SGRSG 49
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 50 YGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK----- 104
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 105 ---------------NEGVIEFVSYSDMKRALEKLDGTEV 129
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 62/244 (25%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
MS S +Y+GNLP ++ + ++E+ F + G+I +I+L + F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVNKQDIEEHFGSHGTGKITEIKLMQ-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
+D + G +F G RL V+ A G R P G + A R
Sbjct: 56 KDVVPAFHGTDFKGERLTVQFARGPRRREPFP----------------GPPERSAAPR-- 97
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + YR+ + GLP + SWQDLKD R++G DV ++E +RD +G
Sbjct: 98 -PRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSE-TRDRDG--------------- 139
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK---------RYDRSPSRSR 228
G V++ N D++ A+ KLD T+F+ R+T R R P RSR
Sbjct: 140 -----KGFVEFENGNDLRTAVEKLDGTDFKG----SRVTCTADIQPPMEDRVPRDPYRSR 190
Query: 229 SRSR 232
S R
Sbjct: 191 SPRR 194
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 10/77 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELK-----IPPRPPCYCFVEFENARDAEDAIR 63
IYVGNLP D++E ++EDLFYKYG+I +IELK IP + F+ FE+ RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFIRFEDPRDADDAVY 60
Query: 64 GRDGYNFDGCRLRVELA 80
GR+GY + +LRVE
Sbjct: 61 GRNGYVYGDSKLRVEYP 77
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 23/122 (18%)
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
G R S+YR+IV GLP S SWQD+KDH+R+AGD+C+A V
Sbjct: 152 GPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANV--------------------- 190
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
G+V++T EDM AIRK DDT+ ++ + D SRSRS SR RS
Sbjct: 191 --ENGRGIVEFTRAEDMHKAIRKFDDTKLKSHKGETAYIRVKEDTRSSRSRSPKTSRRRS 248
Query: 238 RS 239
RS
Sbjct: 249 RS 250
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 53/232 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG G R + +R
Sbjct: 62 GSDFMGERLTVQFARGARHR------------------EGGPGFTHERNSQPRPRRTPHR 103
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G G
Sbjct: 104 MQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNGE--------------------GF 143
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRS 237
V++ N D++ A+ KLD+ EF +G+ + P R+ R+RSRS
Sbjct: 144 VEFENAADLRTAVEKLDNREF-----KGQRVTCVANTQPDIPRNDHRARSRS 190
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 104/235 (44%), Gaps = 62/235 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y + +G+ R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFSQRFSY----------YQSTSGSSRYGPPVRTEHRII 108
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V + + R++ GVV++
Sbjct: 109 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE--------------------GVVEF 148
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVR 243
+ DMK A+ KLD TE R ++T R
Sbjct: 149 ASYSDMKSALEKLDGTELNG--RRIKLTEDH-----------------------R 178
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 46/207 (22%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
S R +Y+G LP D +V+ F YG ++D + + F+E+E+++DAEDA
Sbjct: 4 SATMGRRLYLGKLPPDTAPEDVKKTFGAYGTVVDCRVMT-----GFGFIEYESSKDAEDA 58
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGR-GPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
+ +G F+G + VE A R P DR G GG
Sbjct: 59 VNEMNGKTFNGNSIAVEFARENRPRREPYERDREYGAPRRRPGG---------------- 102
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+RV+V G+ SWQDLKD R+AG V FA++ RD G
Sbjct: 103 ----FRVLVTGVSRDTSWQDLKDFGREAGSVTFADIDRDVPGQ----------------- 141
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GV++Y + +D +A+R LD + R
Sbjct: 142 ---GVLEYMSRDDADHAVRYLDRRDLR 165
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 48/226 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+ S + +VED F K+G E+K+ + F+E+ N DA D + G
Sbjct: 26 VYLCPFVSTATKKDVEDFFVKHGHGTIQEIKLMN---GFGFIEYSNPSDARDIVPIFHGK 82
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F RL V+ A G P+ +D G G R R + YR+
Sbjct: 83 EFMDSRLTVQFARGPR---PTRNDFNGPSGD----------------RTPRPRRTPYRMN 123
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+ GLP+ SWQDLKD RK+G DV F+EVSR+ +G G+V+
Sbjct: 124 ISGLPTDTSWQDLKDFARKSGVDVVFSEVSRNRDGS--------------------GIVE 163
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
+ +D++ AI KLD+ +F+ GR++ D+ SR RSRS
Sbjct: 164 FETADDLRIAINKLDNYDFKG----GRVSCTS-DQQARNSRGRSRS 204
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 17/124 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+GNLP D++E ++EDLF+KYG+I +IELK + F+ FE+ RDA+DA+ GR+GY
Sbjct: 6 IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGY 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYRV 127
+ +LRVE P S+ GG G G GRFG +R SE+RV
Sbjct: 66 VYGNSKLRVEY--------PRST--------GGKPTPMGPGGAGPRGRFGPPTRRSEFRV 109
Query: 128 IVRG 131
IV G
Sbjct: 110 IVTG 113
>gi|159163527|pdb|1X4C|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 2
Length = 108
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 22/85 (25%)
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
E RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT
Sbjct: 15 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---------------------GT- 52
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDM YA+RKLD+T+FR+
Sbjct: 53 GVVEFVRKEDMTYAVRKLDNTKFRS 77
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 96/197 (48%), Gaps = 37/197 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G G GG G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGG------------GGGGYGRWGGRDRYGPPIRTDYRLI 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 107 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK--------------------NEGVIEF 146
Query: 189 TNPEDMKYAIRKLDDTE 205
DMK A+ KLD TE
Sbjct: 147 RLYSDMKRALEKLDGTE 163
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 94/199 (47%), Gaps = 26/199 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+L +RE ++E F +G+I ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VYIGHLSYRVRERDLEKFFRGFGKIREVLLK-----NGFGFVEFDDDRDADDAVYELNGR 60
Query: 69 NFDGCRLRVELAH-GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
DG R L GS G YG A A R+G ++YRV
Sbjct: 61 ELDGERYFTTLGRRAGSRNGTPRPGCAQLYGHVSNCFRLFGRATAPVNRYGPPTRTDYRV 120
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
I+ L S SWQDLKD MR+ GDV +A+ R GVV+
Sbjct: 121 IIENLSSRISWQDLKDRMRQVGDVTYADAHRRKRNE--------------------GVVE 160
Query: 188 YTNPEDMKYAIRKLDDTEF 206
+ + DM+ AI KLD+TE
Sbjct: 161 FASYSDMRRAIDKLDNTEL 179
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 96/209 (45%), Gaps = 40/209 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI ++ LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLKN-----GFGFVEFDDPRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----------SDRRGGYGGGGAGGAGGAGAGAGAGRF 117
C RV + H S RG S R Y G GG G G+
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGP 118
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
+ +E+R+IV L S SWQDLKD MRK G+V F + R ++
Sbjct: 119 PV--RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNK---------------- 160
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + DMK A+ KLD T+
Sbjct: 161 ----NEGVVEFASHSDMKNALDKLDGTDL 185
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 45/228 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE+ F +G I +I+L + F+E+++A DA D +
Sbjct: 16 LYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 70
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A GG+ R GY A A R R + +R
Sbjct: 71 GSEFMGERLVVQFARGGN-------RPRDGYND----------APRMAPR---PRRTVHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP SWQDLKD R++G DV ++EV+R+ + G G
Sbjct: 111 MTITGLPFETSWQDLKDFARQSGLDVVYSEVARERD----------------ASGGGKGF 154
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V+Y +D+ A+ KLD+ +F+ R I+ + D R R RSRS
Sbjct: 155 VEYETAQDLASAVEKLDNHDFKGSTVRC-ISDPQADIPRPRERFRSRS 201
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 27/200 (13%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VGNL S E ++ D F K+G + ++ + PP + FV F + RDA DA+R DG
Sbjct: 9 VWVGNLGSTCEERDLRDEFSKFGELN--KVWVARNPPGFAFVWFADDRDAGDAVREIDGK 66
Query: 69 NFDGCRLRVELAH-GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG-ISRHSEYR 126
+ G RVE++H G RGP GG GGGG GG GG G G GA R G + + Y+
Sbjct: 67 SIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGYGGGGGGGGGYGAPRVGGAAPRTGYK 126
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
V + GLP W +LKD +RKAGDV +A+V G GV
Sbjct: 127 VRITGLPEGMRWSELKDFVRKAGDVTYADV-----------------------RGDEGVA 163
Query: 187 DYTNPEDMKYAIRKLDDTEF 206
+++N +DM A+R+LDDT F
Sbjct: 164 EFSNRDDMSRAVRELDDTYF 183
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 85/163 (52%), Gaps = 37/163 (22%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A RGP R G YG +G
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDGSYG------SG 68
Query: 107 GAGAG---AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGW 163
+G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 69 RSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK-- 126
Query: 164 QSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 127 ------------------NEGVIEFVSYSDMKRALEKLDGTEV 151
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 46/203 (22%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G LP D R EV F +G ++D+ + + FVEFE++RDAEDA+R
Sbjct: 1 MARRLYLGKLPPDTRTDEVTKYFDGFGPLVDVRVMT-----GFGFVEFESSRDAEDALRD 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G F G + VE A GR DR + A R R +
Sbjct: 56 IRGKPFLGSNIVVEFAKENRGRRNDYEDR------------------SFAPR---RRPAG 94
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ V + SWQDLKD R+AG V FA++ R+ G G
Sbjct: 95 IRISVDNISKDTSWQDLKDFGREAGSVSFADIDREVPG--------------------RG 134
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
+++Y + +D + A+++LD E R
Sbjct: 135 ILEYASRDDAEQAVKELDGKELR 157
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 98/202 (48%), Gaps = 31/202 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRH----SE 124
C RV + H S RG G +GGGG GG GG G ++
Sbjct: 61 EL--CSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTD 118
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
+R++V L S SWQDLKD MRKAG+V F + R ++ G
Sbjct: 119 HRLVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTK--------------------NEG 158
Query: 185 VVDYTNPEDMKYAIRKLDDTEF 206
VV++ + DMK AI KLD TE
Sbjct: 159 VVEFASRSDMKNAISKLDGTEL 180
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 117/264 (44%), Gaps = 50/264 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + YR
Sbjct: 64 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVYR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
++V GLP + SWQDLKD R AG DV ++E R+ G
Sbjct: 105 MMVSGLPET-SWQDLKDFARGAGLDVVYSETGREP---------------------GRGF 142
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRN 245
V++ D+K AI KLD +F+ ++ D P R RSRS RS + +
Sbjct: 143 VEFETANDLKTAIEKLDGRDFKGSRVSCVADIQPVDERPFRDPYRSRSPRRSYPPVDEYD 202
Query: 246 RSKSLERSVS-RSVSRSMSASPVK 268
R R S R+ R S P++
Sbjct: 203 RRFPPPRGYSPRAHYRERSPIPMR 226
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 117/264 (44%), Gaps = 50/264 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + YR
Sbjct: 64 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVYR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
++V GLP + SWQDLKD R AG DV ++E R+ G
Sbjct: 105 MMVSGLPET-SWQDLKDFARGAGLDVVYSETGREP---------------------GRGF 142
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRN 245
V++ D+K AI KLD +F+ ++ D P R RSRS RS + +
Sbjct: 143 VEFETANDLKTAIEKLDGRDFKGSRVSCVADIQPVDERPFRDPYRSRSPRRSYPPVDEYD 202
Query: 246 RSKSLERSVS-RSVSRSMSASPVK 268
R R S R+ R S P++
Sbjct: 203 RRFPPPRGYSPRAHYRERSPIPMR 226
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 99/219 (45%), Gaps = 51/219 (23%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR +Y+G L +RE +VE F YGR+ DI LK Y FVEFE+ RDA+D
Sbjct: 1 MSGR----VYIGRLSYQVRERDVERFFKGYGRVTDILLK-----NGYGFVEFEDYRDADD 51
Query: 61 ---------AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGA- 110
+ G R+ VE A G SS G GG G + A
Sbjct: 52 AVYELNGKDLM---------GDRVLVEHAKGTPRGEGRSSSGGRGSDRGGGGDRYNSYAP 102
Query: 111 ---GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPA 167
A R+G ++YR++V L S SWQDLKD+MR+AG+V +A+ +
Sbjct: 103 PRRSARDSRYGPPVRTQYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKSKRNE---- 158
Query: 168 MILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
G+V++ DM AIRKL+ TE
Sbjct: 159 ----------------GIVEFATRSDMDNAIRKLNKTEI 181
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 114/275 (41%), Gaps = 40/275 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y +G R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFSQRFSYYPSQSGS-----------RYGPPIRTEHRII 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V + + R++ GVV++
Sbjct: 108 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE--------------------GVVEF 147
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSK 248
+ DMK A+ KLD TE R R+T
Sbjct: 148 ASYSDMKSALEKLDGTELNG--RRIRLTEDHRRHRSRSRSRSYSRSRSRSRSTGSSRSDS 205
Query: 249 SLERSVSRSVSRSMSASPVKSSRARSRSRSVSPDK 283
+ SR+RSRSRS +P K
Sbjct: 206 RSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTPKK 240
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K AI KL E
Sbjct: 151 ASYSDLKNAIEKLSGKEI 168
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K AI KL E
Sbjct: 151 ASYSDLKNAIEKLSGKEI 168
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 85/175 (48%), Gaps = 31/175 (17%)
Query: 38 LKIPPR------PPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSS 91
L PPR P Y FVEFE++RDA+DA+ +G G R+ VE A RGP
Sbjct: 61 LTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA-----RGPRRD 115
Query: 92 DRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDV 151
YG GG + +G ++G +EYR+IV L S SWQDLKD MR+AG+V
Sbjct: 116 RDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEV 175
Query: 152 CFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+A+ ++ GV+++ + DMK A+ KLD TE
Sbjct: 176 TYADAHKERT--------------------NEGVIEFRSYSDMKRALDKLDGTEI 210
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 57/240 (23%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARD 57
MS S +Y+GNLP ++ + E+ED F + G+I +I+L + F+E+E+A D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A+D + DG +F G RL V+ A RGP + G + A R
Sbjct: 56 AKDVVP--DGTDFKGERLTVQFA-----RGPRHKE-----------TFSGPPDRSSAPR- 96
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFL 176
R + YR+ + GLP + SWQDLKD R++G DV ++E D G+
Sbjct: 97 --PRRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHDGRGF------------- 140
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK----RYDRSPSRSRSRSR 232
V++ D+K A+ KLD EF+ ++ R R P RSRS R
Sbjct: 141 ---------VEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSQEDRQPREPYRSRSPGR 191
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----SDRRGGYGGGGAGGAGGAGAGAGAGRFGISR-H 122
C RV + H + SDR A A G R S
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRL-------------AVADLGNDRRKCSTCK 105
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+ R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 106 NRNRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------N 145
Query: 183 YGVVDYTNPEDMKYAIRKL 201
GVV++ + D+K AI KL
Sbjct: 146 EGVVEFASYGDLKNAIEKL 164
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 118/264 (44%), Gaps = 52/264 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D + D
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + YR
Sbjct: 62 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVYR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
++V GLP + SWQDLKD R AG DV ++E R+ G
Sbjct: 103 MMVSGLPET-SWQDLKDFARGAGLDVVYSETGREP---------------------GRGF 140
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRN 245
V++ D+K AI KLD +F+ ++ D P R RSRS RS + +
Sbjct: 141 VEFETANDLKTAIEKLDGRDFKGSRVSCVADIQPVDERPFRDPYRSRSPRRSYPPVDEYD 200
Query: 246 RSKSLERSVS-RSVSRSMSASPVK 268
R R S R+ R S P++
Sbjct: 201 RRFPPPRGYSPRAHYRERSPIPMR 224
>gi|432852804|ref|XP_004067393.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oryzias
latipes]
Length = 146
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 22/88 (25%)
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
R E V V GLP + SWQDLKDHMR+AGDVCFA+V RD E
Sbjct: 6 RRREEDVGVPGLPPTGSWQDLKDHMREAGDVCFADVQRDGE------------------- 46
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRN 208
GVV++ EDM+YA+R+LD TEFR+
Sbjct: 47 ---GVVEFLRREDMEYALRRLDRTEFRS 71
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 57/232 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+Y+GNLP ++ + E+ED F + G+I +I+L + F+E+E+A DA+D +
Sbjct: 9 LYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP-- 61
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG +F G RL V+ A RGP + G + A R R + Y
Sbjct: 62 DGTDFKGERLTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ + GLP + SWQDLKD R++G DV ++E D G+
Sbjct: 103 RMQISGLPET-SWQDLKDFARQSGLDVVYSETGHDGRGF--------------------- 140
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK----RYDRSPSRSRSRSR 232
V++ D+K A+ KLD EF+ ++ R R P RSRS R
Sbjct: 141 -VEFETGSDLKTAVEKLDGREFKGSRVLCTQDIQSLEDRQSRDPYRSRSPGR 191
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 53/203 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+Y+GNLP ++ + E+ED F + G+I +I+L + F+E+E+A DA+D +
Sbjct: 9 LYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP-- 61
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG +F G RL V+ A RGP + G + A R R + Y
Sbjct: 62 DGTDFKGERLTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIY 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ + GLP + SWQDLKD R++G DV ++E D G+
Sbjct: 103 RMQISGLPET-SWQDLKDFARQSGLDVVYSEAGHDGRGF--------------------- 140
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++ D+K A+ KLD EF+
Sbjct: 141 -VEFETGSDLKTAVEKLDGREFK 162
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 29/201 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G LP DIRE +++ F K+G + +I +K YCF+++E R+AEDA+
Sbjct: 28 IYIGKLPGDIRERDIDKAFSKFGHVREIAMK-----GNYCFLQYEKTREAEDAVYEMHDR 82
Query: 69 NFDGCRLRVELAHGGSG---RGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+F G R++VE A R PS GYGG + R R S+Y
Sbjct: 83 SFFGERIQVEHARQPKEFGFRAPSRFGGSRGYGGYSRSSTYSSSRDYSRRRSPPQR-SDY 141
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
R+ V L + QDLK M+KAGDV F++ R G GV
Sbjct: 142 RLSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVGE--------------------GV 181
Query: 186 VDYTNPEDMKYAIRKLDDTEF 206
V++ + +DM+ A++KLD E
Sbjct: 182 VEFASRKDMERALKKLDGLEI 202
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 91/199 (45%), Gaps = 34/199 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEF++ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHG-GSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
C RV + H RG RG Y + A R +E R+
Sbjct: 61 EL--CNERVTIEHARLRSRGGPRGLGRGRYNDRFSSRRPRGDRSAPPIR------TENRL 112
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
IV L S SWQDLKD MR+AG+V FA+ R P + GVV+
Sbjct: 113 IVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVE 152
Query: 188 YTNPEDMKYAIRKLDDTEF 206
+ + D+K AI KL E
Sbjct: 153 FASYSDLKNAIEKLSGKEI 171
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 15/104 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP+D E+ED F+++GRI + + RPP + F+EFE++RDAEDA+R DG
Sbjct: 12 VYVGGLPNDATSQELEDAFHRFGRIRKVW--VARRPPGFAFIEFEDSRDAEDAVRALDGT 69
Query: 69 NFDGCRLRVELAH----------GGSGRGPSSSDRRGG---YGG 99
G R RVEL+H GGS G SSDR G YGG
Sbjct: 70 RICGVRARVELSHGRRRNGAPDYGGSRGGRFSSDRPHGAPDYGG 113
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K AI KL E
Sbjct: 151 ASYSDLKNAIEKLSGKEI 168
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + + A R +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGGRYSDRFSSRRPRNDRRNAPPVR------TENRLI 112
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 113 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 152
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K AI KL E
Sbjct: 153 ASYSDLKNAIEKLSGKEI 170
>gi|148687918|gb|EDL19865.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Mus
musculus]
Length = 184
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 22/86 (25%)
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+ + + GLP S SWQDLKDHMR+AGDVC+A+V +D
Sbjct: 72 AHFPFMTPGLPPSGSWQDLKDHMREAGDVCYADVQKDG---------------------- 109
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRN 208
G+V+Y EDM+YA+RKLDDT+FR+
Sbjct: 110 MGMVEYLRKEDMEYALRKLDDTKFRS 135
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 94/197 (47%), Gaps = 41/197 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE G G G G G R+G ++YR+I
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGG----------------GGGGGGRDRYGPPIRTDYRLI 102
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD+MR+AG+V +A+ + + GV+++
Sbjct: 103 VENLSSRCSWQDLKDYMRQAGEVTYADTHKGRK--------------------NEGVIEF 142
Query: 189 TNPEDMKYAIRKLDDTE 205
DMK A+ KLD TE
Sbjct: 143 RLYSDMKRALEKLDGTE 159
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 50/203 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +I+L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G S R G+ A R + +R
Sbjct: 64 GSDFMGERLTVQFARG-------SRHREHGHDRNSAP---------------RPRRTPHR 101
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ GT G
Sbjct: 102 MQITGLPNDTSWQDLKDFARQSGADVVYSETNRN--------------------GGTEGF 141
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++ D++ A+ KLD EF+N
Sbjct: 142 VEFETAADLRTAVEKLDGREFKN 164
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 89/203 (43%), Gaps = 44/203 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
C RV + H + SDR + R +
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDR------------FSSRRPRNDRRNAPPVRT 106
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NE 146
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 147 GVVEFASYSDLKNAIEKLSGKEI 169
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 89/203 (43%), Gaps = 44/203 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
C RV + H + SDR + R +
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDR------------FSSRRPRNDRRNAPPVRT 106
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NE 146
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 147 GVVEFASYSDLKNAIEKLSGKEI 169
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 89/203 (43%), Gaps = 44/203 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPSAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSS-----SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
C RV + H + SDR + R +
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDR------------FSSRRPRNDRRNAPPVRT 106
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 107 ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NE 146
Query: 184 GVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 147 GVVEFASYGDLKNAIEKLSGKEI 169
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 102/231 (44%), Gaps = 48/231 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+ L + + +VE+ F ++G +I DI+L + F+E+E+A DA D +
Sbjct: 106 FFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVPAYH 160
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP + G + A R R + YR
Sbjct: 161 GTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR---PRRTPYR 201
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP + SWQDLKD R++G DV ++E RD EG G
Sbjct: 202 MQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG--------------------RGF 240
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
V++ D+K AI KLD EF+ ++ D P R RSRS R
Sbjct: 241 VEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 291
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 45 PCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGG 104
P Y FVEFE++RDA+DA+ +G G R+ VE A RGP YG GG
Sbjct: 98 PRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA-----RGPRRDRDGYSYGSRSGGG 152
Query: 105 AGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQ 164
+ +G ++G +EYR+IV L S SWQDLKD MR+AG+V +A+ ++
Sbjct: 153 GYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERT--- 209
Query: 165 SPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 210 -----------------NEGVIEFRSYSDMKRALDKLDGTEI 234
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 41/203 (20%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R +Y+G +P+D R +V+ F YGRI+D + + FVEFE+++DAE+ ++
Sbjct: 1 MTRRLYLGRIPTDARSEDVQKFFEGYGRIVDCRVMT-----GFGFVEFESSKDAEEVVQV 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+G F G + VE A +R G GG G A R
Sbjct: 56 FNGKAFMGAPILVEFAK---------ENRPRRDDDRGYGGGGAYPPRA-------RRPPG 99
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+IV G+ SWQDLKD R+AG++ FA++ RD G G
Sbjct: 100 VRLIVSGISRDTSWQDLKDFGREAGNITFADIDRDVPGQ--------------------G 139
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++Y + +D +A++ LD + R
Sbjct: 140 VLEYMSRDDADHAVKTLDGKDLR 162
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEF++ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + R + A +E R+I
Sbjct: 61 EL--CSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPP--------LRTENRLI 110
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V FA+ R P + GVV++
Sbjct: 111 VENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEF 150
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ D+K AI KL E
Sbjct: 151 ASYSDLKNAIEKLSGKEI 168
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P +DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRP-RNDRRN----------------- 100
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 101 -----APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIKDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 89/209 (42%), Gaps = 56/209 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRS 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL--------- 144
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ----NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 89/209 (42%), Gaps = 56/209 (26%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR------- 121
C RV + H + G + RF R
Sbjct: 61 EL--CSERVTIEHARARSRGGRG------------------RGRYSDRFSSRRPRNDRRN 100
Query: 122 ----HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 101 APPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL--------- 144
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ----NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNA---------------- 101
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 102 ------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 90/214 (42%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|390457607|ref|XP_003731973.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Callithrix jacchus]
Length = 373
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 44/196 (22%)
Query: 13 NLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDG 72
+LPS+ + ED+ YKY I D++LK P PP + +DA+ G ++D
Sbjct: 32 HLPSESPTKDTEDMIYKYCTIRDMDLKNPRDPPGPLL-----SSVTQDAVYGLHSCDYDR 86
Query: 73 CRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGL 132
C +V G G G S+ G+ G ++R S RV+V L
Sbjct: 87 CLTQVGSPPNGLGTGQGGSESPQGFHGSP-----------------LTRWSXNRVVVSWL 129
Query: 133 PSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPE 192
P S Q+LK HM + G V +AE VY GV++ E
Sbjct: 130 PPDGSXQELKXHMHETGGVYYAE----------------------VYQNGSGVMEDVKKE 167
Query: 193 DMKYAIRKLDDTEFRN 208
DM + RKLD+T+FR+
Sbjct: 168 DMNFLARKLDNTKFRS 183
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 50/228 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G LP RE ++E F + GRI I LK Y FV+F RDA DA+ +G
Sbjct: 6 VFIGRLPRGSREQDIEKFFSRCGRIRGIMLKR-----GYAFVDFRTDRDASDAVHDMNGR 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE+A G +G R A G EY+++
Sbjct: 61 SMRGERMTVEIASGRQRKGSRDQKHRSSSARNDASSNG-----------------EYQIV 103
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SW+D KD +R+ + ++ + + L + G+V +
Sbjct: 104 VENLSSRISWKDFKDMIRR----------------EDIEVVHVDAHKLHKHQ---GIVKF 144
Query: 189 TNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
D+K AI+K + E I +R + + +RS SR RS SR
Sbjct: 145 RTHSDLKRAIKKFQNRE---------IEGRRLEITETRSGSRERSGSR 183
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 50/231 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+ L + + +VE+ F ++G +I DI+L + F+E+E+A DA D + D
Sbjct: 107 FFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMS-----GFGFIEYEDALDARDVVP--D 159
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP + G + A R R + YR
Sbjct: 160 GTDFKGSRLTVQFA-----RGPRHKE-----------TFSGPSDRSNAPR---PRRTPYR 200
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP + SWQDLKD R++G DV ++E RD EG G
Sbjct: 201 MQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG--------------------RGF 239
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
V++ D+K AI KLD EF+ ++ D P R RSRS R
Sbjct: 240 VEFETGADLKTAIEKLDGREFKGSRVTCTQDIQAPDDRPVRDPYRSRSPVR 290
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 49/239 (20%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+++ DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G +F G RL V+ A RGP R+ + G A
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFA-----RGPR---RKEAFQGPPDRNA-----------LP 96
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + +R+ + GLP + SWQDLKD R++G DV ++E R+
Sbjct: 97 RPRRTMFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGREQ----------------- 138
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
G V++ D+K A+ KLD EF+ ++ ++ P R RSRS R
Sbjct: 139 ----GRGFVEFETASDLKTAVEKLDQREFKGSVVSCVADIQNFEERPVRDPYRSRSPPR 193
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 54/233 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D +
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + +R
Sbjct: 64 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTIFR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
++V GLP + SWQDLKD R++G DV ++E R+ G
Sbjct: 105 MMVSGLPET-SWQDLKDFARQSGLDVVYSETGREL---------------------GRGF 142
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSRSRSRSRS 233
V++ D+K AI KLD EF+ ++ Y R P RSRS RS
Sbjct: 143 VEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAIRDPYRSRSPRRS 195
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 100/246 (40%), Gaps = 81/246 (32%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG+L S RE +VE F YGRI +I LK + FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
C RV + H + RG +R Y + +G+ R+G +E+R+I
Sbjct: 61 EL--CDERVTIEHARARRGRGRFAQRFSYY-----------SQSGSSRYGPPVRTEHRII 107
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MRKAG+V + + R++ GVV++
Sbjct: 108 VENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNE--------------------GVVEF 147
Query: 189 TNPEDMKYAIRKLDDTEFR----------------------------------------- 207
+ DMK A+ KLD TE
Sbjct: 148 ASYSDMKSALEKLDGTELNGRRIKLIEDHRRHRSRSRSRSYSRSRSKSKSTGSSRSYSRS 207
Query: 208 --NPWA 211
+
Sbjct: 208 RSRSRS 213
>gi|349604033|gb|AEP99695.1| Splicing factor, arginine/serine-rich 9-like protein, partial
[Equus caballus]
Length = 105
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 22/78 (28%)
Query: 131 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTN 190
GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 1 GLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------MGMVEYLR 38
Query: 191 PEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 39 KEDMEYALRKLDDTKFRS 56
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 95/205 (46%), Gaps = 53/205 (25%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP + ++E F +GRI DI LK + FVEF++ARDA+DA+ +
Sbjct: 8 VFVGRLPPRANDRDLEKFFKGFGRINDINLK-----QGFAFVEFDDARDADDAVYELNHK 62
Query: 69 NFDGCRLRVELAHGGSGRGPSS-------SDRRGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G R+ VE AH G G S RR Y
Sbjct: 63 ELLGERVSVEHAHPSRGGGGGGGRGFRDRSPRRDRYP---------------------PY 101
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
++EYR+IV L + A WQDLKD+MR+AG+V F + +D G
Sbjct: 102 NTEYRLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVGE------------------ 143
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEF 206
GV D++N DM YA++KLD TE
Sbjct: 144 --GVCDFSNESDMLYALKKLDGTEL 166
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 16/134 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG +G +G +G ++G +EYR+I
Sbjct: 59 DLCGERVIVEHA-----RGPR---RDGSYG---SGRSGYGYRRSGRDKYGPPTRTEYRLI 107
Query: 129 VRGLPSSASWQDLK 142
V L S SWQDLK
Sbjct: 108 VENLSSRCSWQDLK 121
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 41/159 (25%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEF++ RDA+DA+ +G + G R+ VE A G G G S
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRGYGYRRS--------------- 48
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 49 ------GRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK----- 97
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTE 205
GV+++ + DMK A+ KLD TE
Sbjct: 98 ---------------NEGVIEFKSYSDMKRALEKLDGTE 121
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 47/202 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +++L + F+E+++ DA D +
Sbjct: 9 LYLGNLPRNATKTDVEAHFATHGTGEITEVKLM-----NGFGFIEYKDPMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G S R GG G A R + +R
Sbjct: 64 GSDFMGERLTVQFARG-------SRHREGGNFGNHERTAPR------------PRRTPHR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E RDS G G
Sbjct: 105 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG--------------------RGF 144
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
V++ D++ A+ KLD EF+
Sbjct: 145 VEFETAADLRTAVEKLDGREFK 166
>gi|426374380|ref|XP_004054052.1| PREDICTED: serine/arginine-rich splicing factor 9 [Gorilla gorilla
gorilla]
Length = 115
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 22/78 (28%)
Query: 131 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTN 190
GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y
Sbjct: 11 GLPPSGSWQDLKDHMREAGDVCYADVQKDG----------------------VGMVEYLR 48
Query: 191 PEDMKYAIRKLDDTEFRN 208
EDM+YA+RKLDDT+FR+
Sbjct: 49 KEDMEYALRKLDDTKFRS 66
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 44/194 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG +P ++ D F YG+ILD +L + FVE E+ARDA D + G
Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE A G + A ++ R + +R+I
Sbjct: 61 EFMGSRIVVEPARGERR-------------------RRENFRESAASKYPRPRRTGFRLI 101
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L SWQDLKD MRKAG+ F + R++ G GVV++
Sbjct: 102 VENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPGA--------------------GVVEF 141
Query: 189 TNPEDMKYAIRKLD 202
+ EDM+ A+ L+
Sbjct: 142 STEEDMRNALTSLN 155
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 36/208 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG---------AGAGAGAGRFGI 119
G R+ ++ + G G S RGG +GGAGG G R+G
Sbjct: 60 ELGGERVILDYSKPRGGGGFGGSGGRGGRVSSYSGGAGGRDRYDRFDRGGPPRRESRYGR 119
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCV 178
+ +RV+V L S SWQDLKD +R+ G + +AE + P LL
Sbjct: 120 PYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK------RPNEALLC------ 167
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ P D+K I K D +
Sbjct: 168 ---------FATPSDLKRCIEKCDGMDL 186
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 44/194 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG +P ++ D F YG+ILD +L + FVE E+ARDA D + G
Sbjct: 2 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 56
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE A G + A ++ R + +R+I
Sbjct: 57 EFMGSRIVVEPARGERR-------------------RRENFRESAASKYPRPRRTGFRLI 97
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L SWQDLKD MRKAG+ F + R++ G GVV++
Sbjct: 98 VENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPGA--------------------GVVEF 137
Query: 189 TNPEDMKYAIRKLD 202
+ EDM+ A+ L+
Sbjct: 138 STEEDMRNALTSLN 151
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
+YVG L S RE ++ED F KYGRI+ +++K Y F+E+ ++RDA+DA+RG DG
Sbjct: 7 VVYVGRLSSRTRERDLEDAFSKYGRIIRLDMKAG-----YAFIEYNDSRDADDAVRGMDG 61
Query: 68 YNFDGCRLRVELAHGGSGR 86
+ DG R+ VE +H G GR
Sbjct: 62 NDLDGARISVEPSHRGEGR 80
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKI-PPRPPCYCFVEFENARDAEDAIRGRDG 67
I++GNLP+DI E + D F G I I++K P Y F+EF DAE A++ R+G
Sbjct: 173 IFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFVKLEDAEKAVKTRNG 232
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ +RVE + G RGP R G A G G G S +RV
Sbjct: 233 FPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSVARGRG--------GPQLRSVHRV 284
Query: 128 IVRGLPSSASWQDLKDHMRKAGD-----VCFAEVS 157
V P S +WQD+KD R D VCF+ ++
Sbjct: 285 YVDNCPPSTTWQDIKDLFRGKNDPTGIEVCFSAIN 319
>gi|221042258|dbj|BAH12806.1| unnamed protein product [Homo sapiens]
Length = 143
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 23/98 (23%)
Query: 110 AGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMI 169
+G G R G + +++ R+ V LP SWQDLKDHMR+AGDVC+A+V RD
Sbjct: 2 SGGGVIR-GPAGNNDCRIYVGNLPPGGSWQDLKDHMREAGDVCYADVYRDGT-------- 52
Query: 170 LLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ EDM YA+RKLD+T+FR
Sbjct: 53 --------------GVVEFVRKEDMTYAVRKLDNTKFR 76
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 25/160 (15%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FVEFE++RDA+DA+ +G G R+ VE A RGP YG GG
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHA-----RGPRRDRDGYSYGSRXGGGGY 55
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
+ +G ++G +E+R+IV L S SWQDLKD MR+AG+V +A+ ++
Sbjct: 56 SSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKE------- 108
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 109 -------------RTNEGVIEFRSYSDMKRALDKLDGTEI 135
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 51/263 (19%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D + D
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSSHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + +R
Sbjct: 62 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTVFR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+++ GLP + SWQDLKD R++G DV ++E R+ G
Sbjct: 103 MLISGLPET-SWQDLKDFARQSGLDVVYSETGREP---------------------GRGF 140
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRN 245
V++ D+K A+ KLD +F+ ++ +D R RSRS RS + +
Sbjct: 141 VEFETAADLKTAVDKLDGRDFKGSRVSCIADIQSHDDRALRDPYRSRSPRRSYPPMEEYD 200
Query: 246 RSKSLERSVSRSVSRSMSASPVK 268
R R S R S PV+
Sbjct: 201 RRFPAPRGYSPRHYRERSPVPVR 223
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 84/158 (53%), Gaps = 21/158 (13%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+R +Y+G+LP ++ + +VED+F G ILD+ + Y FVEFE++RDAEDA+R
Sbjct: 3 NRRVYIGHLPPNVTKTDVEDVFKGLGPILDVRILG-----NYGFVEFESSRDAEDALRDY 57
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
+G + G + VE RR YG G G GG G R G+
Sbjct: 58 NGVSLLGENIIVEAPR---------ERRRDAYGPGVGGYRGGDAPPRGPPRRGV------ 102
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGD-VCFAEVSRDSEG 162
R+ V G+P S SWQDLKD+ R + V +A+V R + G
Sbjct: 103 RINVVGIPGSTSWQDLKDYGRLGSNMVTYADVDRYNPG 140
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +VE F +G I +++L + F+E+++A DA D +
Sbjct: 9 LYLGNLPRHATKSDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G + R GG G A
Sbjct: 64 GSDFMGERLTVQFARG-------TRHREGGMGHERAPPRPRRTPHR-------------- 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E RDS G G
Sbjct: 103 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR--------------------GF 142
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
V++ D++ AI KLD EF+ +R + V P R R+RSRS R
Sbjct: 143 VEFETAADLRTAIEKLDGREFKG--SRVQCIVDLQPDMPPRDRARSRSPGR 191
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 56/233 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA D + D
Sbjct: 9 LYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A RGP R+ + G R + +R
Sbjct: 62 GSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMPRPRRTIFR 102
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
++V GLP + SWQDLKD R++G DV ++E R+ G
Sbjct: 103 MMVSGLPET-SWQDLKDFARQSGLDVVYSETGREL---------------------GRGF 140
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSRSRSRSRS 233
V++ D+K AI KLD EF+ ++ Y R P RSRS RS
Sbjct: 141 VEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAIRDPYRSRSPRRS 193
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 89/214 (41%), Gaps = 66/214 (30%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G L RE +VE F YG I DI+LK + FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGXIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 NFDGCRLRVELAHGG----------------SGRGPSSSDRRGGYGGGGAGGAGGAGAGA 112
C RV + H S R P + DRR
Sbjct: 61 EL--CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRN-DRRNAP--------------- 102
Query: 113 GAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLT 172
+E R+IV L S SWQDLKD MR+AG+V FA+ R P +
Sbjct: 103 -------PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHR-------PKL---- 144
Query: 173 LNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GVV++ + D+K AI KL E
Sbjct: 145 ---------NEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 56/241 (23%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG +F G RL V+ A RGP R+ + G
Sbjct: 56 RDVVP--DGSDFKGERLTVQFA-----RGPR---RKENFPGP-----------MDRPNMP 94
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + +R++V GLP + SWQDLKD R++G DV ++E R+
Sbjct: 95 RPRRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGREL----------------- 136
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD-----RSPSRSRSRSR 232
G V++ D+K AI KLD EF+ ++ Y R P RSRS R
Sbjct: 137 ----GRGFVEFETANDLKTAIEKLDGREFKGSRVTCIADIQTYPDERAIRDPYRSRSPRR 192
Query: 233 S 233
S
Sbjct: 193 S 193
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL S+ +YE+EDLF KYG + +I I PP + F+E+E+ RDAEDA+RG DG
Sbjct: 13 VYIGNLKSNANKYEIEDLFTKYGPLKNIW--IARNPPGFAFIEYEDPRDAEDAVRGLDGT 70
Query: 69 NFDGCRLRVELAHGGSG-------RGPSSSDRRG 95
G R+ V+++ G RG SS RRG
Sbjct: 71 RCCGSRIIVQMSTGKRSRDKSPVHRGRSSPPRRG 104
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
T+++G L R+ ++ED F KYG++ I L+ Y FV+F++ RDAEDAI+ DG
Sbjct: 6 TVFIGGLSDRARDKDIEDFFDKYGKVTQIRLR-----DRYGFVDFDDRRDAEDAIKDLDG 60
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
+ G R+R+ELA+ G S S RG GG G RF +
Sbjct: 61 SSLCGERVRLELANRSRGSRRSGSRDRGRRGGDRGGDERRGSNRPHRTRFTLE------- 113
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
V L S SW DLKD MRKAG+V + + + G V
Sbjct: 114 -VENLSSRVSWADLKDMMRKAGEVTYTDAHQ-------------------RMGKNRGEVC 153
Query: 188 YTNPEDMKYAIRKLD 202
+ N ED++ A +K D
Sbjct: 154 FANSEDLRAAYKKFD 168
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 47/202 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +++L + F+E+++ DA D +
Sbjct: 9 LYLGNLPRNATKTDVEAHFATHGTGEITEVKLMN-----GFGFIEYKDPMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G S R GG G A R + +R
Sbjct: 64 GSDFMGERLTVQFARG-------SRHREGGNFGNHERTAP------------RPRRTPHR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E RDS G G
Sbjct: 105 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR--------------------GF 144
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
V++ D++ A+ KLD EF+
Sbjct: 145 VEFETAADLRTAVEKLDGREFK 166
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHGGSGR 86
DG G R+RVE+++G + R
Sbjct: 67 LDGTRCCGTRIRVEMSNGRTRR 88
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 51/239 (21%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP ++ + ++E+ F +G +I +I+L + F+E+++ DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + DG F G RL V+ A RGP R+ + G A
Sbjct: 56 RDIVP--DGSEFKGERLTVQFA-----RGPR---RKEAFPGPSERNA-----------LP 94
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
R + +R+ + GLP + SWQDLKD R++G DV ++E R+
Sbjct: 95 RPRRTIFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGREQ----------------- 136
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
G V++ D+K A+ KLD EF+ ++ ++ P R RSRS R
Sbjct: 137 ----GRGFVEFETANDLKTAVEKLDQREFKGSVVSCVADIQSFEERPMRDPYRSRSPPR 191
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI ++ + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIR--KVWVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D EVED F +YGRI + + RPP + FVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEVEDAFSRYGRIRKVW--VARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|449664983|ref|XP_002156792.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 244
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 28/198 (14%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++G+L D R ++E F +G I+ + Y FV F++ RDA+DAI +G
Sbjct: 6 LFIGHLSPDARTRDLERFFKDHGFSKTIQEVVV--KTGYGFVVFDDRRDADDAIYELNGK 63
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G RL+VE A SGR SD+ G G G + R+G ++++R++
Sbjct: 64 ELMGARLQVEYAK-PSGR----SDKYDG-GYRDRERERSRDRGGFSSRYGRPYNTDFRLV 117
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+ + + SWQD+KD+ R+AG+V FA+ R+ G GVV++
Sbjct: 118 IENVSTRCSWQDIKDYFRQAGEVTFAKCHREKMGE--------------------GVVEF 157
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+RKLD +E
Sbjct: 158 ASSSDMKNALRKLDGSEL 175
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW--VARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI ++ + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIR--KVWVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
S +Y+GNLP + + +VE F +G I +++L + F+E+++A DA D +
Sbjct: 6 STRLYLGNLPRNATKADVEAHFATHGTGEITEVKLMN-----GFGFIEYKDAMDARDVVP 60
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
G +F G RL V+ A G R GG G A R +
Sbjct: 61 AFHGSDFMGERLTVQFARGARHR---------------EGGMGHERAPP------RPRRT 99
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+R+ + GLP+ SWQDLKD R++ DV ++E RDS G
Sbjct: 100 PHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR------------------- 140
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV-KRYDRSPSRSRSRSRSRSR 236
G V++ D++ A+ KLD EF+ AR + V + D P R+RSRS R
Sbjct: 141 -GFVEFETAADLRTAVEKLDGREFKG--ARVQCLVDTQPDMPPRDPRARSRSPGR 192
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|225711430|gb|ACO11561.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 186
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD+ EV ++F KY D+ LK + FVEF++ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYRNRFDVVLKTR-----FAFVEFDHNRDADHALERLDGT 73
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G R+ VE+A RGP ++D+ GG ++G ++Y++I
Sbjct: 74 LFRGQRIVVEIA-----RGPKTADKYLFRGGMDREPT----QATWVQKYGAPEITQYKLI 124
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
DLK MRKAG V +A+ R++ G+V +
Sbjct: 125 -----------DLKALMRKAGRVTYAQAHRNNL--------------------REGIVCF 153
Query: 189 TNPEDMKYAIRKLDDTEF 206
N DM AI DD E
Sbjct: 154 ENKHDMLRAIDIFDDYEL 171
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 99/242 (40%), Gaps = 51/242 (21%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDA 58
M+ S +Y+GNLP +I + +++D F + G I +I+L + F+E+E+ DA
Sbjct: 1 MADVSSTRLYLGNLPRNITKQDIQDHFGTHGAGSIKEIKLMN-----GFGFIEYEDPMDA 55
Query: 59 EDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
D + G F G RL V+ A RGP D G
Sbjct: 56 RDVVPAFHGTEFKGERLTVQFA-----RGPRRKD---------------DFNGPSDRNIP 95
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG--DVCFAEVSRDSEGWQSPAMILLTLNFL 176
R + YR+ + GL SWQDLKD R +G DV ++E R+ +G
Sbjct: 96 RPRRTIYRMQITGLQPDTSWQDLKDFARNSGQLDVVYSETGRERDG-------------- 141
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRSRSR 236
G V++ D+K A+ KLD F+ ++ D P R RS R
Sbjct: 142 ------KGFVEFETQADLKTAVEKLDGQTFKGATVHCVADIQ--DERPDMRSYRQRSPPR 193
Query: 237 SR 238
R
Sbjct: 194 GR 195
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ D RE +V F KYG I++++ K + F+E+E AE AI+ +G
Sbjct: 140 IFVGNISPDAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKISHAEIAIKEENGQ 194
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G L V+ H G+ + +D RG Y A R + + R++
Sbjct: 195 FFFGEELNVQPHHAGN-YFHNRNDNRGFYP---PPYARNYSPNRNENR---EKKNALRIV 247
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V+ + ASWQDLKD R G V +A + +D + +G+++Y
Sbjct: 248 VKNVDEKASWQDLKDFGRDVGSVNYANIIQDDNKER------------------FGIIEY 289
Query: 189 TNPEDMKYAIRKLDDTEF 206
N E++K A+ L+ +F
Sbjct: 290 YNYENVKKAVEVLNGRKF 307
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 42/198 (21%)
Query: 10 YVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYN 69
YVG L + E +++ F YGR+ DI +K + FVEF++ RDA+DA+ +G
Sbjct: 1 YVGGLSYRVGERDLDRFFRSYGRLRDIVIK-----NGFGFVEFDDDRDADDAVYEMNGKE 55
Query: 70 FDGCRLRVELAHGGS-GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A R P + RG + + RFG++ ++YR+
Sbjct: 56 LLGGRVTVEKARAAPRMRWPRAPPPRGFH----------------SSRFGMAARTDYRLT 99
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ + Y GVV++
Sbjct: 100 VEDLSSRVSWQDLKDFMRQAGEVTYADAHK--------------------YRRNEGVVEF 139
Query: 189 TNPEDMKYAIRKLDDTEF 206
DMK A+ +LD E
Sbjct: 140 ATYADMKNAMHRLDGKEL 157
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKVWVAR--RPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI ++ + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 21 VYVGGLPQDATSQELEDAFNRFGRIR--KVWVARRPPGFAFVEFEDARDAEDAVKALDGT 78
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 79 RICGVRARVEISH 91
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
SR ++VGNLP DI + ++E+ F ++GR+LD+ + +PP + FV+FE+ RDAEDA++G
Sbjct: 45 SRQVFVGNLPDDIEKMDLENEFRQFGRLLDV--WVARKPPGFAFVKFEDQRDAEDAVQGL 102
Query: 66 DGYNFDGCRLRVELAH 81
+ G +RVE++H
Sbjct: 103 NRRTAFGREIRVEISH 118
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + FVEFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWL--ARRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKVW--VARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP RE +VED F YGRI +I LK + FVEF++ RDA+DA+ +G
Sbjct: 92 VYIGRLPYRARERDVEDFFKGYGRIREILLKNG-----FGFVEFDDPRDADDAVYHLNGR 146
Query: 69 NFDGCRLRVELAH-GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRV 127
G R+ VE+ GR S RG YG G + ++G + +R
Sbjct: 147 ELCGERIIVEMTKRPPKGRDAFRSSYRGSYGSRGF--SPERRRRDRDDKYGPPSQTPWRC 204
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCF 153
IV + + SWQ H+R A CF
Sbjct: 205 IVSNVSTRVSWQ----HLRMAQAKCF 226
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG I ++ + PP + FVE+E+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKVFSKYGSIRNVW--VARNPPGFAFVEYEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHGGSGR 86
DG G R+RVE+++G + R
Sbjct: 67 LDGTRCCGTRIRVEMSNGRTRR 88
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 82/187 (43%), Gaps = 44/187 (23%)
Query: 20 EYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVEL 79
E +VE F YGRI DI+LK + FVEFE+ RDA+DA+ DG C RV +
Sbjct: 1 EKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKEL--CSERVTI 53
Query: 80 AHGGSGRGPSS-----SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPS 134
H + SDR + R +E R+IV L S
Sbjct: 54 EHARARSRGGRGRGRYSDR------------FSSRRPRNDRRNAPPVRTENRLIVENLSS 101
Query: 135 SASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDM 194
SWQDLKD MR+AG+V FA+ R P + GVV++ + D+
Sbjct: 102 RVSWQDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEFASYSDL 141
Query: 195 KYAIRKL 201
K AI KL
Sbjct: 142 KNAIEKL 148
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG+++D+ +K + FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMKN-----GFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E G S GGY G G G + R+ + +R++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSG--GGYRGREPTFRRG-GERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG 149
V L + SWQD+KDH+RK G
Sbjct: 116 VDNLSTRYSWQDIKDHIRKLG 136
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP D E+ED F ++GRI + + RPP + FVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 79/259 (30%)
Query: 1 MSGRFSRTIYVGNLPSD---------------IREYEVEDLF--YKYGRILDIELKIPPR 43
MS S +Y+GNLP + + + ++E+ F + G+I +I+L
Sbjct: 1 MSEVSSTRLYLGNLPRNADSKGHLFCLDSLPPVNKQDIEEHFGSHGTGKITEIKLMQ--- 57
Query: 44 PPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAG 103
+ F+E+E+A DA+D + DG +F G RL V+ A G R P
Sbjct: 58 --GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRRREPFP------------- 100
Query: 104 GAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEG 162
G + A R R + YR+ + GLP + SWQDLKD R++G DV ++E +RD +G
Sbjct: 101 ---GPPERSAAPR---PRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSE-TRDRDG 152
Query: 163 WQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITV----- 217
G V++ N D++ A+ KLD T+F+ R+T
Sbjct: 153 K--------------------GFVEFENGNDLRTAVEKLDGTDFKG----SRVTCTADIQ 188
Query: 218 ----KRYDRSPSRSRSRSR 232
R R P RSRS R
Sbjct: 189 PPMEDRVPRDPYRSRSPRR 207
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 32/206 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ D RE EV F KYG I++I+ K + F+E+ AE+AI +G
Sbjct: 143 IFVGNISPDAREEEVRRKFAKYGDIINIQWKR-----RFAFIEYSKPIYAENAIHEENGK 197
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGG-------AGGAGAGAGAGRF-GIS 120
++ G L V+ H P + G YG +F I
Sbjct: 198 HYMGEELSVQAHH----LSPFKNSYSGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIE 253
Query: 121 RHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYS 180
+ + R++V+ + SWQDLKD R+ G V +A V I +
Sbjct: 254 KKNSLRIVVKNIDEKVSWQDLKDFGREVGSVNYANV------------IYNNNGNNKEW- 300
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEF 206
YG+++Y N E MK A+ L+ +F
Sbjct: 301 --YGIIEYYNYETMKRAVEVLNGKKF 324
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + F+EFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLPS + +VE+ F K+G IL ++K + F+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 NFDGCRLRVELAHGGSGRG 87
+F G +LRVE+ G
Sbjct: 70 DFGGNKLRVEVPFNARANG 88
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + FVEFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLAR--RPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 19/78 (24%)
Query: 145 MRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDT 204
MR+AGDVCF++V RD G G+V+YTN EDMKYAIRKLDD+
Sbjct: 1 MRRAGDVCFSQVFRDR-------------------GGMTGIVEYTNYEDMKYAIRKLDDS 41
Query: 205 EFRNPWARGRITVKRYDR 222
EFRN ++ I V+ YDR
Sbjct: 42 EFRNAFSWAYIRVREYDR 59
>gi|89267363|emb|CAJ82789.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 32 RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDG---CRLRVELAHG-----G 83
RI +I LK + FVEF++ RDA+DA+ Y +G C RV + H
Sbjct: 1 RIREINLK-----NGFGFVEFDDHRDADDAV-----YELNGKVLCNERVTIEHARNRRGR 50
Query: 84 SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKD 143
G G Y A +G G R+G +E+R+IV L S SWQDLKD
Sbjct: 51 GGMMGGGGGGGGRYPNRFAYRQSNSG---GPSRYGPPVRTEHRIIVENLSSRVSWQDLKD 107
Query: 144 HMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDD 203
MRKAG+V + + R + GVV++ + DMK A+ KLD
Sbjct: 108 FMRKAGEVTYVDAHRSNRNE--------------------GVVEFASYTDMKNALDKLDG 147
Query: 204 TEF 206
E
Sbjct: 148 VEL 150
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + +YE+ED F KYG + ++ + PP + FVEFE+ RDAED++RG DG
Sbjct: 13 VYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGCRLRVELAHGGS 84
G R+RVE++ G S
Sbjct: 71 RVCGQRVRVEMSSGQS 86
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 89/223 (39%), Gaps = 50/223 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP + +VE F K+G E+KI + F+E+++ DA D + G
Sbjct: 10 LYLGNLPKHATKADVEAHFSKHGTGEITEIKIMN---GFGFIEYKDPMDARDVVPAFHGS 66
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G RL V+ A G R D GYG A +
Sbjct: 67 MFMGERLTVQFARGNRHR-----DTANGYGHERAPPRPRRTPHR--------------ME 107
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+ GLP SWQ AG DV + E SR W+ G+V+
Sbjct: 108 ITGLPDGCSWQ--------AGVDVVYTETSRRGNSWE-------------------GIVE 140
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSR 230
+ P DM+ AI KLD EF+N RYDR SRS R
Sbjct: 141 FETPADMRTAIEKLDGREFKNSRTAQPSEPPRYDRGRSRSPIR 183
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ + RE +V F KYG I++++ K + F+E+E AE AI+ +G
Sbjct: 227 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKT-----RFAFIEYEKTSHAEIAIKEENGQ 281
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
F G L V+ H G+ + SD R Y G + + + R++
Sbjct: 282 FFFGEELNVQPHHAGN-YFHNRSDNRSFYPPYGRTYSPNRNESR-------EKKNALRIV 333
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V+ + ASWQDLKD R G V +A + +D + +G+++Y
Sbjct: 334 VKNIDEKASWQDLKDFGRDVGSVNYANIIQDDNKER------------------FGIIEY 375
Query: 189 TNPEDMKYAIRKLDDTEF 206
N E +K A+ L+ +F
Sbjct: 376 YNSETVKKAVEVLNGRKF 393
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 64/198 (32%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG+IL+++LK Y FVEF++ RDA+DA+ +G
Sbjct: 2 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 56
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ VE A RGP R G YG G S+HS
Sbjct: 57 DLCGERVIVEHA-----RGPR---RDGSYGS------------------GRSKHS----- 85
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
+G+ L D+MR+AG+V +A+ + G ++ GV+++
Sbjct: 86 -KGIL-------LSDYMRQAGEVTYADAHK---GRKNE-----------------GVIEF 117
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 118 VSYSDMKRALEKLDGTEV 135
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + +YE+ED F KYG + ++ + PP + FVEFE+ RDAED++RG DG
Sbjct: 13 VYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGCRLRVELAHGGS 84
G R+RVE++ G S
Sbjct: 71 RVCGQRVRVEMSSGQS 86
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP+D E+E+ F KYGRI + L RPP + F+EFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 NFDGCRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +Y+GNL + +YE+ED F KYG + ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 ISCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVELAHGGS 84
DG G R+RVE++ G S
Sbjct: 67 LDGTRVCGQRVRVEMSSGQS 86
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 41/203 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG GG G R + +R
Sbjct: 62 GSDFMGERLTVQFARGSRHREQGGG-----------GGGGGGGYNHDRNSAPRPRRTPHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++G DV ++E +R+ G
Sbjct: 111 MQISGLPNDTSWQDLKDFARQSGLDVVYSETNRNGSNE--------------------GF 150
Query: 186 VDYTNPEDMKYAIRKLDDTEFRN 208
V++ D++ A+ KLD+ EF+N
Sbjct: 151 VEFETAADLRSAVEKLDNREFKN 173
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
G R+RVE++ G S + G G GGAG
Sbjct: 71 RCCGTRIRVEMSSGRSRERSRRGGGQSGEAGSNRGGAG 108
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI + + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ +YE+E +F KYG I ++ + PP + FVEFE+ RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 NFDGCRLRVELAHGGSGR 86
G R+RVE+++G + R
Sbjct: 71 RCCGTRIRVEMSNGRTRR 88
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 49/203 (24%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAG-AGAGRFGISRHSEY 125
G +F G RL V+ A G R GG+ AG R + +
Sbjct: 62 GSDFMGERLTVQFARGTRHR------------------EGGSAAGFNNERAPPRPRRTPH 103
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ + GLP+ SWQDLKD R++ DV ++E RD G G
Sbjct: 104 RMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNGR--------------------G 143
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++ D++ A+ KLD EF+
Sbjct: 144 FVEFETAADLRTAVEKLDGREFK 166
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 39/204 (19%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S ++VG+LP + ++ED F + GRI D+ K Y FVEF + RDA DAI
Sbjct: 1 MSARVFVGHLPRKVDRRDIEDYFDRIGRIRDVVHK-----GNYAFVEFADERDARDAISE 55
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF--GISRH 122
+G ++ G R+ VELA+ S G GR G R
Sbjct: 56 LNGTSWKGERIIVELANRRRRSRSQSG------------DRRGRNPRRKPGRITRGPPRR 103
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
++Y++ ++ L + SWQDLKD + V +A+
Sbjct: 104 TDYQISIKNLSTRVSWQDLKDIFGEVAKVVYADAHNKRR--------------------N 143
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEF 206
YG+V++ E+M K + F
Sbjct: 144 YGIVEFDTKEEMNRCYEKFNGKSF 167
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG+++D+ +K + FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E G S GY G G G + R+ + +R++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSG--SGYRGREPTFRRG-GERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG 149
+ L + SWQD+KDH+RK G
Sbjct: 116 IDNLSTRFSWQDIKDHIRKLG 136
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 52/237 (21%)
Query: 1 MSGRFSRT-IYVGNLPSDIREYEVEDLFYKYGR--ILDIELKIPPRPPCYCFVEFENARD 57
M+ S T +Y+GNLP + + ++E F +G I +++L + F+E+++ D
Sbjct: 1 MTTEVSNTRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMN-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF 117
A D + DG +F G RL V+ A RGP R G+ G
Sbjct: 56 ARDVVP--DGSDFMGERLTVQFA-----RGPRQ--RESGFSGHERAPP------------ 94
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFL 176
R + +R+ + GLP+ SWQDLKD R+ G DV ++E RDS G
Sbjct: 95 -RPRRTPHRMQITGLPNETSWQDLKDFARQPGLDVVYSETGRDSNGR------------- 140
Query: 177 CVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
G V+Y D++ A+ KLD EF+ + I + D P R RSRS
Sbjct: 141 -------GFVEYETAADLRTAVDKLDGREFKGNRVQC-IADTQPDMPPRDGRGRSRS 189
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ + RE +V F KYG I++++ K + F+E+E AE AI+ +G
Sbjct: 311 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKT-----RFAFIEYEKTSHAEIAIKEENGQ 365
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRHSEYRV 127
F G L V+ H G+ + G R I + + R+
Sbjct: 366 LFFGEELNVQPHHAGNYFNNRND--------NRNYYPPTYGRNYSPNRNEIREKKNALRI 417
Query: 128 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
++R + ASWQDLKD R G V +A + +D + +G+++
Sbjct: 418 VIRNVDEKASWQDLKDFGRDIGSVNYANIFQDENKER------------------FGIIE 459
Query: 188 YTNPEDMKYAIRKLDDTEF 206
Y N E++K A+ L+ +F
Sbjct: 460 YYNYENVKKAVEVLNGRKF 478
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 20/84 (23%)
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
++YRVIV L S SWQDLKD++R+AGDV FAE + +
Sbjct: 152 TKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQSVQNE------------------- 192
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEF 206
G+VD+ +DMK AI KLDDTE
Sbjct: 193 -GIVDFATYDDMKAAIEKLDDTEL 215
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + ++VE +F KYG + ++ + PP + FVEFE++RDAEDA+R DG
Sbjct: 12 VYIGNLATHASRHDVESVFSKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRAVDGS 69
Query: 69 NFDGCRLRVELAHG 82
G R++ E++HG
Sbjct: 70 RICGSRVKCEMSHG 83
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 44/200 (22%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNLP D + +VE F +G E+K+ + F+E+E+A DA D + G
Sbjct: 9 LYLGNLPRDATKADVEAHFATHGTGTIKEIKLMN---GFGFIEYEDAMDARDVVPAFHGS 65
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G RL V+ A G R A A R R + +R+
Sbjct: 66 ELKGDRLTVQFARGSRQRD------------------NFAATDRTAPR---PRRTPHRMQ 104
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+ GL SWQDLKD R++ DV ++E RD +G S V+
Sbjct: 105 ISGLSGETSWQDLKDFARQSSLDVVYSETGRDRDGKGS-------------------FVE 145
Query: 188 YTNPEDMKYAIRKLDDTEFR 207
+ D++ A+ KLD EF+
Sbjct: 146 FETAADLRTAVEKLDGREFK 165
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAH 81
DG G R+RVE+++
Sbjct: 67 LDGTRCCGTRVRVEMSN 83
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNVW--VARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E+ F KYG + ++ I PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKFEIENAFNKYGPLRNVW--IARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVELAHGGS 84
G R+RVE++ G S
Sbjct: 71 RCCGTRIRVEMSSGRS 86
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + +I + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHELEGKFSKYGPLRNIW--VARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG + G R+RVE+
Sbjct: 67 LDGVHLCGTRVRVEM 81
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG+I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA----------GAGAGAGRFG 118
G R+ ++ + G G GG + +GG G R+G
Sbjct: 60 ELGGDRVILDYSKPRGGGGSGGGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPRRESRYG 119
Query: 119 ISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLC 177
+ +RV+V L S SWQDLKD +R+ G + +AE + P LL
Sbjct: 120 RPYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEA------HKRPNEALLC----- 168
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ P D+K I K D +
Sbjct: 169 ----------FATPSDLKRCIDKCDGMDL 187
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SG IYVG+L S + ++ED F YG I ++ + PP + FVEFE+ RDAEDA
Sbjct: 10 SGNPDCKIYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDA 67
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRG 87
+RG DG + G R+RVEL++ GS +G
Sbjct: 68 VRGLDGRSICGRRVRVELSNAGSRKG 93
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG++ D+ +K + FV+F+ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQEQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G R+ +E G + +R GG G G + R+ + +R++
Sbjct: 59 DLCGERVILEFPRRKVG---YNEERSGGGFRGREPTFRRGGERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG 149
+ L + SWQD+KDH+RK G
Sbjct: 116 IDNLSTRYSWQDIKDHIRKLG 136
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 47/202 (23%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYG--RILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + +VE F +G I +I+L + F+E+++A DA D + D
Sbjct: 9 LYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G +F G RL V+ A G R GG A G A R + +R
Sbjct: 62 GSDFMGERLTVQFARGTRHRE-----------GGSAPGFNNERAPP------RPRRTPHR 104
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E RD G G
Sbjct: 105 MQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNGR--------------------GF 144
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
V++ D++ A+ KLD EF+
Sbjct: 145 VEFETAADLRTAVEKLDGREFK 166
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 36 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNVW--VARNPPGFAFVEFEDPRDAEDAVRG 93
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 94 LDGTRCCGTRVRVEM 108
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SG IYVG+L S + ++ED F YG I ++ + PP + FVEFE+ RDAEDA
Sbjct: 10 SGNPDCKIYVGDLGSSASKQDLEDAFSYYGSIRNVW--VARNPPGFAFVEFEDPRDAEDA 67
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRG 87
+RG DG + G R+RVEL++ GS +G
Sbjct: 68 VRGLDGRSICGRRVRVELSNAGSRKG 93
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++G SG G
Sbjct: 68 TICGRRARVEMSNGKSGSG 86
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL ++ +YE+E +F KYG + ++ + PP + F+EFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGNNGSKYELECIFSKYGPLRNV--WVARNPPGFAFIEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAHG 82
DG G R RVE++ G
Sbjct: 67 LDGSRMCGTRARVEMSSG 84
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S+ + E+ED F YG + + + PP + FVEFE+ARDAEDA+RG DG
Sbjct: 16 VYVGDLGSNADKQEIEDAFSYYGPLRSVW--VARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 69 NFDGCRLRVELAHGGSG 85
G R RVEL+ G S
Sbjct: 74 TICGRRARVELSTGKSA 90
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++G SG G
Sbjct: 68 TICGRRARVEMSNGKSGSG 86
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M G R +Y+GN+ D RE +VE F YG++ ++ LK Y FVEFE+ RDA+D
Sbjct: 1 MPGNHHR-LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADD 54
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGIS 120
A++ DG + +G R+RVE A R P R Y + G G G
Sbjct: 55 AVQDLDGKDMNGSRVRVEFA-----RSPREK-RNSRYQSRRSPPRGRRGPPMKRNPPG-- 106
Query: 121 RHSEYRVIVRGLPSSASWQ 139
R ++YR+ V L + SWQ
Sbjct: 107 RRTQYRIRVENLSTRTSWQ 125
>gi|448878364|gb|AGE46145.1| arginine/serine-rich splicing factor SR30 transcript IV [Sorghum
bicolor]
Length = 97
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 19/71 (26%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYK-------------------YGRILDIELKIP 41
M+ R TIYVGNLP DIRE EV+DLFYK YGRI++I+LKIP
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKSNGWSSGREGNVDCEWSIFYGRIVEIDLKIP 60
Query: 42 PRPPCYCFVEF 52
PRPP + FVE
Sbjct: 61 PRPPGFAFVEL 71
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIEGKFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG + G R+RVE+
Sbjct: 67 LDGIHLCGTRVRVEM 81
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+LP D +E E+E F YG + + + PP + FVEFE+ RDA+D++RG DG
Sbjct: 32 VYVGDLPRDAQEKELERAFSYYGPLKSVWVAR--NPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 69 NFDGCRLRVELAHG 82
+ G R+RVEL+ G
Sbjct: 90 SLCGTRVRVELSTG 103
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAEDA R DG
Sbjct: 29 VYVGNLGSGAAKHEIEAAFTKFGPLRNVW--VARNPPGFAFVEFEDSRDAEDACRALDGS 86
Query: 69 NFDGCRLRVELAH 81
G R+RVE++H
Sbjct: 87 RLCGTRVRVEMSH 99
>gi|56758208|gb|AAW27244.1| SJCHGC09413 protein [Schistosoma japonicum]
Length = 214
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRVRVEM 81
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G+ RGPS R G + R+G +EYR++
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRER----DRYDRDRRGGRYDKNSSRYGPPLRTEYRLV 115
Query: 129 VRGLPSSASWQ 139
V L + SWQ
Sbjct: 116 VENLSTRVSWQ 126
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA +G DG
Sbjct: 14 VYVGNLGDNASKHEIEDVFRRYGKVRSVW--VARNPPGFAFVEFEDERDAEDAAKGLDGS 71
Query: 69 NFDGCRLRVELA 80
G R VE++
Sbjct: 72 RICGVRAAVEMS 83
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding
protein srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LPSD E+E++F ++GRI ++ + RPP + FVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 63 RICGVRARVELS 74
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ R +VE+ F +G I I LK P Y FV FE+ RDAE+A R DG
Sbjct: 8 LYIGYLPNQARMSDVEEFFKGFGHIKSINLK-----PGYGFVVFEDKRDAEEAARDLDGK 62
Query: 69 NFDGCRLRVELAHGG----------SGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
G ++ VE+A G SG P D R G+ G + G +
Sbjct: 63 RMCGEKVDVEMAKGPGNKSRKEYSRSGDRPIVRDTRSGFNGRRRSRSRDRGFSS------ 116
Query: 119 ISRHSEYR----VIVRGLPSSASWQDLKDHMRKAG----DVCFAEVSRD 159
+ YR + + L + SWQDLKD +R D C A D
Sbjct: 117 -RKKEPYRDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYED 164
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 41/162 (25%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ F+E+++ DA D + G +F G RL V+ A G S R GG+G
Sbjct: 1569 FGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARG-------SRHREGGFGNHERTAPR 1621
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQS 165
R + +R+ + GLP+ SWQDLKD R++ DV ++E RDS G
Sbjct: 1622 -------------PRRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG--- 1665
Query: 166 PAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
G V++ D++ A+ KLD EF+
Sbjct: 1666 -----------------RGFVEFETAADLRTAVEKLDGREFK 1690
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP+ + +VE F YG++ D+ +K + FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ +E G + +R G G G + R+ + +R++
Sbjct: 59 ELCGERVILEFPRRKVG---YNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLV 115
Query: 129 VRGLPSSASWQDLKDHMRKAG 149
+ L + SWQD+KDH+RK G
Sbjct: 116 IDNLSTRYSWQDIKDHIRKLG 136
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 42/205 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L + + E +++ F YG+I DI +K Y FV+F++ RDA+DA+ +G
Sbjct: 4 LYVGRLNNRVIERDLKKFFDNYGKIRDIMMK-----NGYAFVDFDDYRDADDAVYDLNGK 58
Query: 69 NFDGCRLRVELAHG---GSGRGPSSSDR----RGGYGGGGAGGAGGAGAGAGAGRFGISR 121
G R+ +E A G GSG P +R R G+G ++G
Sbjct: 59 ELMGDRVIIEHAKGIERGSGGAPYGRERFKDDRSGFG----------RKQRARDKYGPPV 108
Query: 122 HSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSG 181
+++ + V L S SWQDLKD+ R +V +A+ R G C+ +
Sbjct: 109 RTKWMLRVENLSSRVSWQDLKDYCRPHAEVTYADAHRKERG------------VACICTS 156
Query: 182 TYGVVDYTNPEDMKYAIRKLDDTEF 206
TY EDMK IRK+D+TE
Sbjct: 157 TY--------EDMKNLIRKIDNTEL 173
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAH 81
DG G R+RVE+++
Sbjct: 67 LDGTRCCGTRVRVEMSN 83
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S + E+ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGDLGSSASKQELEDAFSYYGSLQNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVEL++G
Sbjct: 71 TLCGRRVRVELSNG 84
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVELAH 81
DG G R+RVE+++
Sbjct: 67 LDGTRCCGTRVRVEMSN 83
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 NFDGCRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S+ E+E+ F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 14 VYVGNLGSNAARGEIEEAFSKYGTLRNVW--VARNPPGFAFVEFEDPRDAEDAVRALDGV 71
Query: 69 NFDGCRLRVELAHG 82
G R++VE++ G
Sbjct: 72 RLCGARVKVEMSTG 85
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 43/228 (18%)
Query: 9 IYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +V F + G+I +I+L + F+E+E+ DA D +
Sbjct: 9 LYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A G R AG G A R R + YR
Sbjct: 64 GSQFMGERLTVQFARGSRNRDGGGG----------AGNGSGFSGERSAPR---PRRTPYR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E R + G G
Sbjct: 111 MQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNGE--------------------GF 150
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V++ D+ A+ LD EF+ R + P R R RSRS
Sbjct: 151 VEFETAADLATAVDALDGKEFKEKVVRCVANAQA--DPPVRDRGRSRS 196
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAED
Sbjct: 1 MEWSLDCKVYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAED 58
Query: 61 AIRGRDGYNFDGCRLRVELAH 81
A R DG G R+RVE++H
Sbjct: 59 ACRALDGSRLCGTRVRVEMSH 79
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 55/223 (24%)
Query: 18 IREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCR 74
+ + E+ED F + G+I +I+L + F+E+E+A DA+D + G +F G R
Sbjct: 32 VTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVPAFHGTDFKGER 86
Query: 75 LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPS 134
L V+ A RGP + G + A R R + YR+ + GLP
Sbjct: 87 LTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIYRMQISGLPE 127
Query: 135 SASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPED 193
+ SWQDLKD R++G DV ++E D G+ V++ D
Sbjct: 128 T-SWQDLKDFARQSGLDVVYSETGHDGRGF----------------------VEFETGSD 164
Query: 194 MKYAIRKLDDTEFRNPWARGRITVK----RYDRSPSRSRSRSR 232
+K A+ KLD EF+ ++ R R P RSRS R
Sbjct: 165 LKTAVEKLDGREFKGSRVLCTQDIQSQEDRQPRDPYRSRSPGR 207
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 43/228 (18%)
Query: 9 IYVGNLPSDIREYEVEDLF--YKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +V F + G+I +I+L + F+E+E+ DA D +
Sbjct: 9 LYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A G R AG G A R R + YR
Sbjct: 64 GSQFMGERLTVQFARGSRNRDGGGG----------AGNGSGFSGERSAPR---PRRTPYR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP+ SWQDLKD R++ DV ++E R + G G
Sbjct: 111 MQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNGE--------------------GF 150
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V++ D+ A+ LD EF+ R + P R R RSRS
Sbjct: 151 VEFETAADLATAVDALDGKEFKEKVVRCVANAQA--DPPVRDRGRSRS 196
>gi|428186342|gb|EKX55192.1| hypothetical protein GUITHDRAFT_160399 [Guillardia theta CCMP2712]
Length = 321
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
Y FV+FE + DAEDAI DGY +G +LRV+ HG S G DR G GG G+ G
Sbjct: 6 YGFVKFEKSSDAEDAISQYDGYELEGNKLRVQ--HGRSQAGRRGDDRGGYDGGQGSRGPR 63
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSP 166
G + RV V G+ SWQDLKD RKAG+ + + DS+
Sbjct: 64 PTG--------------QNRVYVDGIDEKTSWQDLKDFARKAGNPAYTDTVMDSK----- 104
Query: 167 AMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDT 204
G YGV++Y ED A R LD T
Sbjct: 105 --------------GKYGVIEYRTAEDCYSACRMLDGT 128
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSVW--IARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHG 82
G G R RVEL+ G
Sbjct: 66 GRTVCGRRARVELSTG 81
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|395854494|ref|XP_003799724.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Otolemur
garnettii]
Length = 179
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 22/90 (24%)
Query: 118 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLC 177
G S +++ + V LP SWQDLKDH R+AGDVC+A++ +D
Sbjct: 45 GPSWNNDCSIFVGNLPPGGSWQDLKDHPREAGDVCYADIYQD------------------ 86
Query: 178 VYSGTYGVVDYTNPEDMKYAIRKLDDTEFR 207
T VV++ ED+ YAI +LD+T+FR
Sbjct: 87 ----TTSVVEFVQKEDITYAIEELDNTKFR 112
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVGNL S ++E+E F K+G + ++ + PP + FVEFE++RDAED
Sbjct: 1 MEWSLDCKVYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAED 58
Query: 61 AIRGRDGYNFDGCRLRVELAH 81
A R DG G R+RVE++H
Sbjct: 59 ACRALDGSRLCGTRVRVEMSH 79
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 47/203 (23%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +Y+GNLP + +VE F +G E+K+ + F+E+++A DA D +
Sbjct: 6 STRLYLGNLPRHATKADVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARDVVP-- 60
Query: 66 DGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEY 125
DG +F G RL V+ A G + R GG G R + +
Sbjct: 61 DGSDFMGERLTVQFARG-------TRHREGGMGH--------------ERAPPRPRRTPH 99
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ + GLP+ SWQDLKD R++ DV ++E RDS G G
Sbjct: 100 RMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGR--------------------G 139
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR 207
V++ D++ A+ KLD EF+
Sbjct: 140 FVEFETAADLRTAVEKLDGREFK 162
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNVW--VARNPPGFAFVEFEDKRDAEDACRSLDGQ 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
SG +YVGNL S + E+E +F YG + ++ + PP + FVEFE+ RDAEDA
Sbjct: 6 SGPLDCKVYVGNLGSQGSKNELERVFGYYGALKNVW--VARNPPGFAFVEFEDNRDAEDA 63
Query: 62 IRGRDGYNFDGCRLRVELAHGGSGRG 87
+R DG G R RVE++ G S RG
Sbjct: 64 VRALDGRTVCGVRARVEMSSGQSRRG 89
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
++++GNL R ++E F YG + DI LK Y FV+F++ DA+DA++ D
Sbjct: 412 HSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLD 466
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR---------- 116
G G ++R+EL++GG R D + + + + + R
Sbjct: 467 GKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYR 526
Query: 117 -FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAE 155
+G + ++Y + + L SWQDLKD R+ G+V + E
Sbjct: 527 KYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYGE 566
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+LP + E E+E +F +YGR+ ++ + PP + FVEFE+A DA DA+R DG
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNV--WVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 69 NFDGCRLRVELAHGGSGRGP 88
G R RVEL+ G S + P
Sbjct: 70 VMCGVRARVELSTGKSRQKP 89
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|145346370|ref|XP_001417662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577890|gb|ABO95955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 129
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVGNLP D +V+ F +G + +E+K P PP + FV F++ARDAE A R D
Sbjct: 1 RAVYVGNLPLDASSRDVDRRFAAHGVVARVEVKRPRHPPAFAFVTFDDARDAERAARAED 60
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G FDG RGP R GA A + +R +E+
Sbjct: 61 GTTFDGR------------RGPYDRPR----------WRDGADARSMVRERAATRKTEHS 98
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFA 154
V V LP A W+D+KD R+AG V +A
Sbjct: 99 VKVEDLPRGADWRDVKDAFRRAGRVTYA 126
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S+ + E+ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 10 VYVGDLGSNASKQELEDAFSYYGSLRNV--WVARHPPGFAFVEFEDPRDAEDAVRGLDGR 67
Query: 69 NFDGCRLRVELAHG 82
G R RVEL++G
Sbjct: 68 TICGRRARVELSNG 81
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|449432024|ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Cucumis sativus]
gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Cucumis sativus]
Length = 253
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+VGN D R+ E+E LF KYGR+ I++K + FV FE+ RDAEDAIRG D
Sbjct: 2 RPIFVGNFGYDTRQSELERLFSKYGRVERIDMK-----SGFAFVYFEDERDAEDAIRGLD 56
Query: 67 G--YNFDGCRLRVELAHGGSGR 86
+ +D RL VE A G GR
Sbjct: 57 NLPFGYDRRRLSVEWARGERGR 78
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 10 LSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 67
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 68 LDGTRCCGTRVRVEM 82
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
++ +YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA +G
Sbjct: 8 YNSKVYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKG 65
Query: 65 RDGYNFDGCRLRVELA 80
DG G R VE++
Sbjct: 66 LDGSRICGVRATVEMS 81
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
++ +YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA +G
Sbjct: 8 YNSKVYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKG 65
Query: 65 RDGYNFDGCRLRVELA 80
DG G R VE++
Sbjct: 66 LDGSRICGVRATVEMS 81
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L ++ + E+ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 9 VYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 66
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++GG G G
Sbjct: 67 TICGRRARVEMSNGGRGYG 85
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE++RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGNSASKHEIETAFSKYGPLRNV--WVARNPPGFAFVEFEDSRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRVRVEM 81
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
T+++G+LP I+ V+D F +YG + I L + F++F +DA++A++ DG
Sbjct: 8 TVWMGDLPPGIKRGHVKDFFEEYGPLGGIRLM-----NNFGFIDFRKKKDAKEAVKELDG 62
Query: 68 YNFDGCRLRVELAHGGSGRGPSSSDRRG-GYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G R+R+E + GP S ++G Y GG + + ++Y
Sbjct: 63 KKLKGARIRLEHSD-----GPGGSKKKGEDYDAVNFPPIGGQ-----SSMYERPYRTKYT 112
Query: 127 VIVRGLPSSASWQDLKDHMRKAGDVCFAEV 156
+ V L + SW DLK+ MR+AG+V + +
Sbjct: 113 ISVSNLSTRFSWADLKNFMRRAGEVTYTDA 142
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ I PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|194901400|ref|XP_001980240.1| GG19772 [Drosophila erecta]
gi|195500858|ref|XP_002097554.1| GE26284 [Drosophila yakuba]
gi|190651943|gb|EDV49198.1| GG19772 [Drosophila erecta]
gi|194183655|gb|EDW97266.1| GE26284 [Drosophila yakuba]
Length = 135
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNDKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDL 141
V L S SWQ L
Sbjct: 119 VENLSSRVSWQSL 131
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFAKYGPLRNVW--VARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|326431779|gb|EGD77349.1| Rsf1 [Salpingoeca sp. ATCC 50818]
Length = 89
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M+GR +YVG LP D + E+E F K+GR+ D+ + +PP + F+EFEN DA D
Sbjct: 1 MAGRMR--VYVGGLPDDADKRELEAEFSKFGRLQDV--WVARKPPGFAFIEFENDMDARD 56
Query: 61 AIRGRDGYNFDGCRLRVELA 80
A+R DG G R+RVE+A
Sbjct: 57 AVRELDGRELCGNRVRVEIA 76
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNL S ++E F YGR++++ + PP + +VEFE+ RDA+DAI+G DG
Sbjct: 7 IYVGNLSSSTTRGDLEYEFEYYGRLINV--WVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 69 NFDGCRLRVELAHG 82
G R+RVE +HG
Sbjct: 65 ELHGRRIRVERSHG 78
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 90/217 (41%), Gaps = 47/217 (21%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++ + D + ++EDLF +G I +++L Y F+EF++ DA A DG
Sbjct: 16 LFLRPIGPDTNKEQIEDLFSSHGPIKEVKLIK-----NYGFIEFDSLDDAIRAKDNVDGQ 70
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+G L A+ R P + R G G + +RV
Sbjct: 71 PLNGEPLFCTYANPIKVREPRTYRDRNDRNDRG----------------GDRKEDIFRVN 114
Query: 129 VRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVD 187
+ GL SWQDLKD R A DV + VSRD EG G V+
Sbjct: 115 ISGLAPGVSWQDLKDFGRTADVDVTYTNVSRDREG--------------------EGTVE 154
Query: 188 YTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSP 224
+ + + M+ A+ KLD TEF +G I + D +P
Sbjct: 155 FRSADQMEQAVSKLDGTEF-----KGEIVTLKIDPNP 186
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG--AGAGAGAGRFGISRHSEYR 126
G R+ VE A G+ RGPS R Y GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQ 139
++V L + SWQ
Sbjct: 120 LVVENLSTRVSWQ 132
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVGNL + ++E+E F KYG + ++ + +PP + FVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 57/223 (25%)
Query: 18 IREYEVEDLFYKY---GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCR 74
+ + E+ED F + G+I +I+L + F+E+E+A DA+D + DG +F G R
Sbjct: 32 VTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGER 84
Query: 75 LRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPS 134
L V+ A RGP + G + A R R + YR+ + GLP
Sbjct: 85 LTVQFA-----RGPRHKE-----------TFSGPSDRSSAPR---PRRTIYRMQISGLPE 125
Query: 135 SASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPED 193
+ SWQDLKD R++G DV ++E D G+ V++ D
Sbjct: 126 T-SWQDLKDFARQSGLDVVYSETGHDGRGF----------------------VEFETGSD 162
Query: 194 MKYAIRKLDDTEFRNPWARGRITVK----RYDRSPSRSRSRSR 232
+K A+ KLD EF+ ++ R R P RSRS R
Sbjct: 163 LKTAVEKLDGREFKGSRVLCTQDIQSQEDRQPRDPYRSRSPGR 205
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S+ ++E+E F KYG + ++ + PP + FVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGSNASKHEIEAAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRIRVEM 81
>gi|28571693|ref|NP_788669.1| B52, isoform D [Drosophila melanogaster]
gi|281361721|ref|NP_001163603.1| B52, isoform I [Drosophila melanogaster]
gi|195329208|ref|XP_002031303.1| GM24118 [Drosophila sechellia]
gi|195571105|ref|XP_002103544.1| GD18917 [Drosophila simulans]
gi|23171195|gb|AAN13577.1| B52, isoform D [Drosophila melanogaster]
gi|194120246|gb|EDW42289.1| GM24118 [Drosophila sechellia]
gi|194199471|gb|EDX13047.1| GD18917 [Drosophila simulans]
gi|272476965|gb|ACZ94900.1| B52, isoform I [Drosophila melanogaster]
Length = 135
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDL 141
V L S SWQ L
Sbjct: 119 VENLSSRVSWQSL 131
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 77/183 (42%), Gaps = 56/183 (30%)
Query: 30 YGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPS 89
YGRI DI+LK + FVEFE+ RDA+DA+ DG C RV + H +
Sbjct: 3 YGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGKEL--CSERVTIEHARARSRGG 55
Query: 90 SSDRRGGYGGGGAGGAGGAGAGAGAGRFGISR-----------HSEYRVIVRGLPSSASW 138
G + RF R +E R+IV L S SW
Sbjct: 56 RG------------------RGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSW 97
Query: 139 QDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAI 198
QDLKD MR+AG+V FA+ R P + GVV++ + D+K AI
Sbjct: 98 QDLKDFMRQAGEVTFADAHR-------PKL-------------NEGVVEFASYGDLKNAI 137
Query: 199 RKL 201
KL
Sbjct: 138 EKL 140
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSVW--IARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHG 82
G G R RVEL+ G
Sbjct: 66 GRTVCGRRARVELSTG 81
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL S ++E+E F K+G + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 9 LSCKVYVGNLGSSASKHEIESAFSKFGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 66
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 67 LDGTRCCGTRVRVEM 81
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVG+L + R ++E LF KYGR+ D+++K Y FVEF + RDA+DA
Sbjct: 10 STRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRD-----YAFVEFSDPRDADDARHYL 64
Query: 66 DGYNFDGCRLRVELAHG---GS----GRGP 88
DG +FDG R+ VE A G GS GRGP
Sbjct: 65 DGKDFDGSRIIVEFAKGVPRGSREYLGRGP 94
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNL S ++E F YGR++++ + PP + +VEFE+ RDA+DAI+G DG
Sbjct: 7 IYVGNLSSSTTRGDLEYEFEYYGRLINV--WVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 69 NFDGCRLRVELAHG 82
G R+RVE +HG
Sbjct: 65 ELHGRRIRVERSHG 78
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L + R +VE LF +YGR+ ++ELK Y FVEF + RDA+DA DG
Sbjct: 41 LYVGRLSTRTRTQDVEYLFGRYGRVRNVELKHD-----YGFVEFSDPRDADDARYELDGR 95
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+FDG R+ VE A G+ RGP S
Sbjct: 96 DFDGSRIIVEFAK-GTPRGPGGS 117
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHG 82
G G R RVEL+ G
Sbjct: 66 GRTVCGRRARVELSTG 81
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + ++E+E F KYG + + I PP + FVEFE+ RDAEDA+RG DG
Sbjct: 12 VYIGNLGQNGTKHEIEASFTKYGPLKNT--WIARNPPGFAFVEFEDPRDAEDAVRGLDGT 69
Query: 69 NFDGCRLRVELA 80
G R+RVE++
Sbjct: 70 RICGVRVRVEMS 81
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 13 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 70
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 71 LDGTRCCGTRVRVEM 85
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKHEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVGNL + ++E+E F KYG + ++ + +PP + FVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 43/192 (22%)
Query: 47 YCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ F+E+E+A DA D + DG +F G RL V+ A RGP +
Sbjct: 4 FGFIEYEDAMDARDVVP--DGSDFKGERLTVQFA-----RGPRHKE-----------TFN 45
Query: 107 GAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQS 165
G A R R + +R+ V GLP+ SWQDLKD R++G DV ++E +R+ +G
Sbjct: 46 GPSDRPSAPR---PRRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGR-- 100
Query: 166 PAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKR-YDRSP 224
G V++ + D+K A+ KLD E + V+ +R P
Sbjct: 101 ------------------GFVEFESHADLKTAVEKLDGRELKGSQVTCVADVQPAEERPP 142
Query: 225 SRSRSRSRSRSR 236
R RSRS R
Sbjct: 143 YRDPYRSRSPPR 154
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 13 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 70
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 71 LDGTRCCGTRVRVEM 85
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 56/198 (28%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK + + GR
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK--------------------NGVPGRRCL 43
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ +LR A G G S RR +G ++G +E+R+I
Sbjct: 44 HACPGQLRDAGARGLGCGGGGYSSRR----------------TSGRDKYGPPVRTEFRLI 87
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 88 VENLSSRCSWQDLKDFMRQAGEVTYADAHKE--------------------RTNEGVIEF 127
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 128 RSYSDMKRALDKLDGTEI 145
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
++++GNL R ++E F YG + DI LK Y FV+F++ DA+DA++ D
Sbjct: 168 HSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLD 222
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGR---------- 116
G G ++R+EL++GG R D + + + + + R
Sbjct: 223 GKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYR 282
Query: 117 -FGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCF 153
+G + ++Y + + L SWQDLKD R+ G+V +
Sbjct: 283 KYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSY 320
>gi|300681335|emb|CAZ96065.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 324
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+ GNL D+R EVE LF KYGR+ ++LK R + FV E+ RDAEDAI D
Sbjct: 26 RPIFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G S RR +R ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTVGRRGSSRRSPTN---------------------ARPTK 124
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H K G V + ++ Q + + GT G
Sbjct: 125 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQ----FEVQEDATRALEGTNG 180
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR----NPWARGRITVKRYDRSPSRSRSRS 231
++YA+R D+ R +P RGR +RSP R RS S
Sbjct: 181 SHFMDRVISVEYALRDDDEKGERGNGYSPDRRGR------ERSPGRRRSPS 225
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEF++ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFDDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGG--AGAGAGAGRFGISRHSEYR 126
G R+ VE A G+ RGPS R Y GG + R+G +EYR
Sbjct: 61 ELLGERVVVEPAR-GTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYR 119
Query: 127 VIVRGLPSSASWQ 139
++V L + SWQ
Sbjct: 120 LVVENLSTRVSWQ 132
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL + +++E F KYG + ++ + PP + FVEFE++RDAEDA+R DG
Sbjct: 12 VYIGNLANHTSRHDIESAFGKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRALDGS 69
Query: 69 NFDGCRLRVELAH 81
G R++ E++H
Sbjct: 70 RICGSRVKCEMSH 82
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY--GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +V F + G+I +I+L + F+E+++ DA D +
Sbjct: 9 LYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN-----GFGFIEYDDPLDARDVVPAFH 63
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRHSEY 125
G F G RL V+ A G R S GG GG GG G G G R G R + +
Sbjct: 64 GSTFMGERLTVQFARGTRNREGGSG--------GGGGGGGGGGGGYGGERSGPRPRRTAF 115
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ + GLP SWQDLKD R++ DV ++E R++ G G
Sbjct: 116 RMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNGE--------------------G 155
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V++ D+ A+ LD EF++ R + + D P R RSRS
Sbjct: 156 FVEFETAADLASAVEALDGKEFKDKIVRC-VANTQPDPPPRDGRGRSRS 203
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL S + ++E +F +YG I ++ + PP + FVEFE++RDAEDA++ DG
Sbjct: 13 VYIGNLGSRATKDDIEAVFSRYGPIRNV--WVARNPPGFAFVEFEDSRDAEDAVKALDGT 70
Query: 69 NFDGCRLRVELAH 81
G R+RVE++H
Sbjct: 71 RICGARVRVEMSH 83
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 12/90 (13%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
S +YVG+L + R ++E LF KYGR+ D+++K Y FVEF + RDA+DA
Sbjct: 10 STRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRD-----YAFVEFSDPRDADDARHYL 64
Query: 66 DGYNFDGCRLRVELAHG---GS----GRGP 88
DG FDG R+ VE A G GS GRGP
Sbjct: 65 DGKEFDGSRIIVEFAKGVPRGSREYLGRGP 94
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 20/96 (20%)
Query: 111 GAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMIL 170
G G+ R+G +EYR+IV L S SWQDLKD+MR+AG+V +A+ ++
Sbjct: 174 GRGSDRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRR--------- 224
Query: 171 LTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
G+V++++ D+K AI KLD TE
Sbjct: 225 -----------NEGIVEFSSSSDLKAAIDKLDGTEL 249
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G LP +++ ++E F YGRI DI +K Y FVEF++ RDA+DA+ +G
Sbjct: 6 VYIGGLPYGVKDRDIERFFKGYGRIRDILIK-----NGYGFVEFDDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDR 93
+ G R+ VE A G P SDR
Sbjct: 61 DLLGERVSVERARG----TPRGSDR 81
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSVW--VARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
N GC+LRVEL+ G RGP S
Sbjct: 74 NMCGCKLRVELSTGEKRSRSRGPPPS 99
>gi|222617767|gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF +ARDA++A DG
Sbjct: 73 LYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDARDADEARYNLDGR 127
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+FDG R+ VE A G RGP S
Sbjct: 128 DFDGSRMIVEFAK-GVPRGPGGS 149
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNL S ++E F YGR++++ + PP + +VEFE+ RDA+DAI+G DG
Sbjct: 15 IYVGNLSSSTTRGDLEYEFEYYGRLINVW--VAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 69 NFDGCRLRVELAHG 82
G R+RVE +HG
Sbjct: 73 ELHGRRIRVERSHG 86
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S +YE+E+ F KYG + ++ + PP + FVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|115434616|ref|NP_001042066.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|54290784|dbj|BAD61423.1| putative splicing factor [Oryza sativa Japonica Group]
gi|113531597|dbj|BAF03980.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|125524487|gb|EAY72601.1| hypothetical protein OsI_00466 [Oryza sativa Indica Group]
gi|215765664|dbj|BAG87361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF +ARDA++A DG
Sbjct: 20 LYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDARDADEARYNLDGR 74
Query: 69 NFDGCRLRVELAHG 82
+FDG R+ VE A G
Sbjct: 75 DFDGSRMIVEFAKG 88
>gi|357145457|ref|XP_003573649.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like
[Brachypodium distachyon]
Length = 277
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R I+ GNL D R+ E+E LF KYGR+ +++K + FV E+ RDAEDAI D
Sbjct: 2 RPIFCGNLDYDARQSEIERLFSKYGRVERVDIKT-----GFAFVYMEDERDAEDAIHRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
+F G RLRVE + DR GG G + ++
Sbjct: 57 RTDFGRKGRRLRVEW---------TKEDRSGGRKGNPKRSPTSV------------KPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P S +DL+ H + G + + R+ Q + T GT G
Sbjct: 96 TLFVINFDPISTRTRDLEKHFDQYGKIANIRIRRNFAFVQYESQEDAT----KALDGTNG 151
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
++YA+R DD E RN ++ R + DRSP R +R RS
Sbjct: 152 STLMDRVISVEYALR--DDDEKRNGYSPERRGGR--DRSPDRRDNRGRS 196
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 7/76 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI-RGRDG 67
+Y+G LP R+ ++++ F K G+I++IELK+ Y FVEFEN AE+++ + +G
Sbjct: 87 VYIGGLPEHTRQEDLQNCFGKIGKIVNIELKV-----GYGFVEFENREAAEESVEKYHEG 141
Query: 68 YNFDGCRLRVELAHGG 83
Y F G ++RVEL+HGG
Sbjct: 142 Y-FMGQKIRVELSHGG 156
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 MSGRFS----RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENAR 56
M RF R +Y+GNL + +VE LF K+G I +I + RPP + FV FE+ R
Sbjct: 1 MGSRFESTEGRKVYIGNLNPEATVEDVESLFSKFGTIGNI--WVARRPPGFAFVTFEDPR 58
Query: 57 DAEDAIRGRDGYNFDGCRLRVELAHG 82
DA DAI DG + G L+VEL+ G
Sbjct: 59 DATDAIEELDGSEYKGQNLKVELSKG 84
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
S +YVGNL + ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+RG
Sbjct: 40 LSCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRG 97
Query: 65 RDGYNFDGCRLRVEL 79
DG G R+RVE+
Sbjct: 98 LDGTRCCGTRVRVEM 112
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding protein
srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG+I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA-------------GAGAGAG 115
G R+ ++ + G G GG GG G G
Sbjct: 60 ELGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRES 119
Query: 116 RFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLN 174
R+G + +RV+V L S SWQDLKD +R+ G + +A E + P LL
Sbjct: 120 RYGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYA------EAHKRPNEALLC-- 171
Query: 175 FLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ P D+K I K D +
Sbjct: 172 -------------FATPSDLKRCIEKCDGMDL 190
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNLPS E+E+ F +YGR+ ++ + PP + FV FE+ RDA DA + D
Sbjct: 18 VYVGNLPSGASRTELEEAFSRYGRVKNV--WVARNPPGFAFVMFEDERDASDACKALDDR 75
Query: 69 NFDGCRLRVELAHGGS 84
N G R+RVE++ G S
Sbjct: 76 NVCGVRVRVEMSSGES 91
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK R + FV E+ RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE + DR G G A R ++
Sbjct: 86 GIDFGRKGRRIRVEW---------TKEDRTAGRRGSSRRSPTQA------------RPTK 124
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H K G V + ++ Q + + GT G
Sbjct: 125 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQ----FEVQEDATRALEGTNG 180
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR----NPWARGRITVKRYDRSPSRSRSRS 231
++YA+R D+ R +P RGR +RSP R RS S
Sbjct: 181 SHFMDRVISVEYALRDDDEKGERGNGYSPDRRGR------ERSPGRRRSPS 225
>gi|28571695|ref|NP_788670.1| B52, isoform F [Drosophila melanogaster]
gi|281361723|ref|NP_001163604.1| B52, isoform K [Drosophila melanogaster]
gi|23171196|gb|AAN13578.1| B52, isoform F [Drosophila melanogaster]
gi|272476966|gb|ACZ94901.1| B52, isoform K [Drosophila melanogaster]
Length = 147
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP +RE ++E F YGR DI +K Y FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
G R+ VE A G + RG S+ DR GG GG GG + R+G +EYR+I
Sbjct: 61 ELLGERVVVEPARG-TARG-SNRDRYDDRYGGRRGGGGGRYNEKSSSRYGPPLRTEYRLI 118
Query: 129 VRGLPSSASWQDLKDH--MRKAGDVCFA 154
V L S SWQ + +H M +A V +
Sbjct: 119 VENLSSRVSWQ-VSEHGSMYRALGVVYT 145
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 NFDGCRLRVELA 80
G R+RVE++
Sbjct: 71 RCCGTRIRVEMS 82
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L ++ + E+ED F YG + ++ + PP + FVEFE+ RDAEDAIRG DG
Sbjct: 9 VYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAIRGLDGR 66
Query: 69 NFDGCRLRVELAHGGSGRG 87
G R RVE+++G G G
Sbjct: 67 TICGRRARVEMSNGSRGYG 85
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis
mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 13 VYVGDLGSGATKQELEDAFSYYGSLRNVW--VARNPPGFAFVEFEDARDAEDAIRGLDGR 70
Query: 69 NFDGCRLRVELAHG 82
G R RVE ++G
Sbjct: 71 TICGRRARVEPSNG 84
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Query: 4 RFSRT-IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
R++ T +YVG+L S R ++E LF KYGR+ D+++K Y FVEF + RDA+DA
Sbjct: 7 RYANTRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKR-----DYAFVEFSDPRDADDAR 61
Query: 63 RGRDGYNFDGCRLRVELAHG---GS----GRGP 88
DG + DG R+ VE A G GS GRGP
Sbjct: 62 YHLDGKDLDGSRIIVEFAKGVPRGSREYLGRGP 94
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Query: 1 MSGRFSR-----TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENA 55
MS + SR +YVG L ++ + E+ED F YG + ++ + PP + FVEF++A
Sbjct: 1 MSKKMSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNVW--VARNPPGFAFVEFDDA 58
Query: 56 RDAEDAIRGRDGYNFDGCRLRVELA 80
RDAED++RG DG G R+RVEL+
Sbjct: 59 RDAEDSVRGLDGRTVCGRRVRVELS 83
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G LP D E+E F +GR+ D+ + PP + F+ FE+ARDAEDA+R DG
Sbjct: 4 IFIGGLPEDASRNELEKEFESFGRLRDV--WVARNPPGFGFIIFEDARDAEDAVREMDGK 61
Query: 69 NFDGCRLRVELAHG 82
G R+RVE A G
Sbjct: 62 RVCGSRIRVEFARG 75
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK R + FV E+ RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G S RR +R ++
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTVGRRGSSRRSPTN---------------------ARPTK 124
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H K G V + ++ Q + + GT G
Sbjct: 125 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQ----FEVQEDATRALEGTNG 180
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR----NPWARGRITVKRYDRSPSRSRSRS 231
++YA+R D+ R +P RGR +RSP R RS S
Sbjct: 181 SHFMDRVISVEYALRDDDEKGERGNGYSPDRRGR------ERSPGRRRSPS 225
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E LF +YGR+ D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRD-----YAFVEFGDPRDADDARHYLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGG 101
+FDG R+ VE + G RG D RG G G
Sbjct: 68 DFDGSRITVEFSRGAP-RGSRDFDSRGPPPGAG 99
>gi|225712646|gb|ACO12169.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 142
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + ++E+ED+F +YG++ + + PP + FVEFE+ RDAEDA + DG
Sbjct: 14 VYVGNLGDNASKHELEDVFRRYGKVRSVW--VARNPPGFAFVEFEDERDAEDASKALDGS 71
Query: 69 NFDGCRLRVELA 80
G R VE++
Sbjct: 72 RICGVRATVEMS 83
>gi|156098601|ref|XP_001615316.1| alternative splicing factor ASF-1 [Plasmodium vivax Sal-1]
gi|148804190|gb|EDL45589.1| alternative splicing factor ASF-1, putative [Plasmodium vivax]
Length = 208
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKI--PPRPPCYCFVEFENARDAE 59
+G+ IYVGN+P + + E+ F ++G+I +I++K Y F+E+E+ + AE
Sbjct: 3 AGKSGHRIYVGNIPGSMSKQEIIKAFEEFGKITEIDIKYNRNTNGTNYAFIEYESYKSAE 62
Query: 60 DAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGG--GAGGAGGAGAGAGAGRF 117
I ++G G L+VE S D++ GG GG G
Sbjct: 63 KTIENKNGQKLKGYMLKVEY----------SIDKKNKEGGDLIALGGREAVSKGLLTNVR 112
Query: 118 GISRHSEYRVIVRGLPSSASWQD-LKDHMRKAGDVCFAEVS 157
S YRV+V+ P D +K + KAG V + ++
Sbjct: 113 LPKNRSHYRVVVKNFPRKKIKLDGIKTFLMKAGKVIYTQLE 153
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + R +VE LF +YGRI +ELK Y FVEF N RDA+DA DG
Sbjct: 41 LYVGHLSTHTRTKDVEYLFGRYGRIRCVELKHD-----YGFVEFSNPRDADDARYELDGQ 95
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+ DG R+ VE A G+ RGP S
Sbjct: 96 DVDGSRIIVEFAR-GTPRGPGGS 117
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I++G LP D E+E F GR+ D+ + PP + F+ FE+ RDAEDA+R DG
Sbjct: 4 IFIGGLPEDASRTELEREFECIGRLRDV--WVARNPPGFGFIIFEDPRDAEDAVREMDGK 61
Query: 69 NFDGCRLRVELAHGGSG 85
G R+RVELA +G
Sbjct: 62 KICGSRIRVELARATTG 78
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E LF +YGRI ++ELK Y F+E+ + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLEYLFSRYGRIREVELKR-----DYAFIEYSDPRDADDAQYNLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ DG R+ VE A G RGP S R G G G G
Sbjct: 68 DVDGSRIIVEFAK-GIPRGPGGSREREYMGRGPPPGTG 104
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 3 GRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI 62
G + IYVGNLP ++E+E+ F +GR+ ++ + PP + +VEFE+ RDA DA+
Sbjct: 8 GPLNCKIYVGNLPPGAAKHEIEERFSDFGRLRNVWVAR--NPPGFAYVEFEDHRDARDAV 65
Query: 63 RGRDGYNFDGCRLRVELAHG 82
+ +G G R RVE +HG
Sbjct: 66 KSLNGKMICGVRSRVEFSHG 85
>gi|162457883|ref|NP_001105264.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680375|gb|AAT37129.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
Length = 193
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGR+ I++K Y FV FE+ RD DAIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRVERIDIK-----SGYAFVYFEDERDGNDAIRALD 56
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDR 93
GY F R R+ + G P ++ +
Sbjct: 57 GYPFGPGRRRLSVEWSRDGNKPEANTK 83
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 16 VYVGNLGNSGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 74 TLSGCRVRVELSNGEKRTRSRGPPPS 99
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ D+++K + FVEF + RDA+DA +G
Sbjct: 13 LYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKH-----DFAFVEFSDPRDADDARYSLNGR 67
Query: 69 NFDGCRLRVELA 80
+FDG R+ VE A
Sbjct: 68 DFDGSRIIVEFA 79
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF + RDA+DA DG
Sbjct: 16 LYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDPRDADDARYNLDGR 70
Query: 69 NFDGCRLRVELAHG 82
+FDG R+ VE A G
Sbjct: 71 DFDGSRMIVEFAKG 84
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R +YVG+L ++ R+ ++E +F YG + + I PP + FVEFE+ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSVW--IARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYNFDGCRLRVELAHGGSGR 86
G G R RVEL+ G R
Sbjct: 66 GRTVCGRRARVELSTGKYAR 85
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ D+++K + FVEF + RDA+DA +G
Sbjct: 45 LYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHD-----FAFVEFSDPRDADDARYSLNGR 99
Query: 69 NFDGCRLRVELAHGGS----------GRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFG 118
+FDG R+ VE A GG GRGP G G G G A + G
Sbjct: 100 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPP-------GSGRCFNCGIDGHWARDCKAG 152
Query: 119 ISRHSEYRVIVRG 131
++ YR RG
Sbjct: 153 DWKNKCYRCGERG 165
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVW--VARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++ + E+ED F YG + ++ + PP + FVEFE+ARDAED++RG DG
Sbjct: 10 VYVGELGNNASKQEIEDAFSYYGPLRNVWVAR--NPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 68 TICGRRARVELS 79
>gi|449017556|dbj|BAM80958.1| similar to Gbp1p protein [Cyanidioschyzon merolae strain 10D]
Length = 293
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 126 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
RV V L S SWQ LKDHMRKAG+V FAEV + +G S GV
Sbjct: 95 RVYVGNLAWSVSWQALKDHMRKAGEVVFAEVFTERDG----------------RSRGCGV 138
Query: 186 VDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V+Y D AI L+DTE +GR+ R DR P++ R+++
Sbjct: 139 VEYATEADSANAIATLNDTEL-----QGRLIFVREDREPNQPLRRNKT 181
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 90/234 (38%), Gaps = 52/234 (22%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIP--PRPPCYCFVEFENARDAEDAIR 63
SR +YVGNL + ++D K G ++ E+ R VE+ D+ +AI
Sbjct: 93 SRRVYVGNLAWSVSWQALKDHMRKAGEVVFAEVFTERDGRSRGCGVVEYATEADSANAI- 151
Query: 64 GRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
+ L+ L R P+ RR A G GA A G +RH
Sbjct: 152 ----ATLNDTELQGRLIFVREDREPNQPLRRNKTS---ASGFHGANATTG------NRHH 198
Query: 124 EYR---------------VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAM 168
E R +IV LP S +WQDLKD R G++ A++ D EG
Sbjct: 199 EARGRNQPPSFPSDKGRKIIVWNLPYSYTWQDLKDEFRACGNIIRADILIDQEG------ 252
Query: 169 ILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDR 222
S G + + + ED + AI+ +D E GRI R D+
Sbjct: 253 ----------RSRGAGTIVFESEEDAQRAIQMMDRAEL-----AGRIVDVRLDK 291
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG LP E+E++F ++G + ++ + RP + FVEFE+ARDA DA+R DG
Sbjct: 38 VYVGGLPERASRGELEEIFGRFGPLRNV--WVARRPWGFAFVEFEDARDAIDAVRQLDGS 95
Query: 69 NFDGCRLRVELAHGG-SGRGPSSSD--RRGG 96
G R RVEL+HG RGP D RRGG
Sbjct: 96 RMCGVRARVELSHGQRRNRGPRGYDDERRGG 126
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 40/229 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKY--GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + +V F + G+I +I+L + F+E+++ DA D + D
Sbjct: 9 LYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN-----GFGFIEYDDPLDARDVV--PD 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI-SRHSEY 125
G F G RL V+ A G R S GG GG GG G G G R G R + +
Sbjct: 62 GSTFMGERLTVQFARGTRNREGGSG--------GGGGGGGGGGGGYGGERSGPRPRRTAF 113
Query: 126 RVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R+ + GLP SWQDLKD R++ DV ++E R++ G G
Sbjct: 114 RMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNGE--------------------G 153
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYDRSPSRSRSRSRS 233
V++ D+ A+ LD EF++ R + + D P R RSRS
Sbjct: 154 FVEFETAADLASAVEALDGKEFKDKIVRC-VANTQPDPPPRDGRGRSRS 201
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELEHAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|308502850|ref|XP_003113609.1| CRE-RSP-5 protein [Caenorhabditis remanei]
gi|308263568|gb|EFP07521.1| CRE-RSP-5 protein [Caenorhabditis remanei]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G +P + RE ++E YGRI +I +K + FV+FE+ RDAEDA DG
Sbjct: 4 IYLGKIPYNARERDIERFLKGYGRITNISMKY-----GFAFVDFEDHRDAEDACHDLDGK 58
Query: 69 NFDGCRLR--VELAHGGSGRGPSSSDRRGG 96
DG +R VE+A G P SD RGG
Sbjct: 59 TMDGGSMRVVVEMARG----KPRGSDARGG 84
>gi|226472962|emb|CAX71167.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 161
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 22/71 (30%)
Query: 138 WQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYA 197
WQDLKDHMR+AGDV +A+V RD GT GVV++ EDMKYA
Sbjct: 68 WQDLKDHMREAGDVGYADVFRD---------------------GT-GVVEFLRYEDMKYA 105
Query: 198 IRKLDDTEFRN 208
IR+LDD++FR+
Sbjct: 106 IRRLDDSKFRS 116
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial
[Desmodus rotundus]
Length = 116
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 4 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 61
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 62 TLCGCRVRVELSNGEKRSRNRGPPPS 87
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 55/198 (27%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G L ++RE +++ F YGR+L+I+LK E RG
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-------------NGHGTPERXXRGL--- 47
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
GC + + G G S RR +G ++G +E+R+I
Sbjct: 48 ---GCGVCLARVGVFGGGGGGYSSRR----------------TSGRDKYGPPVRTEFRLI 88
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDY 188
V L S SWQDLKD MR+AG+V +A+ ++ GV+++
Sbjct: 89 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERT--------------------NEGVIEF 128
Query: 189 TNPEDMKYAIRKLDDTEF 206
+ DMK A+ KLD TE
Sbjct: 129 RSYSDMKRALDKLDGTEI 146
>gi|218189952|gb|EEC72379.1| hypothetical protein OsI_05650 [Oryza sativa Indica Group]
Length = 603
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 43/234 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYGR+ +++K + FV E+ RDA++AI D
Sbjct: 326 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMK-----SGFAFVYMEDERDADEAIHRLD 380
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F G RLRVE + DR GG G +R ++
Sbjct: 381 RIEFGRKGRRLRVEW---------TKEDRSGGRRGNSKRSPNN------------TRPTK 419
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H + G + + R+ Q L + GT G
Sbjct: 420 TLFVINFDPINTRTRDLERHFDQYGKISNVRIRRNFAFVQYE----LQEDATKALEGTNG 475
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRN---PWARGRITVKRYDRSPSRSRSRSRSRS 235
++YA+R DD E RN P RGR DRSP R R RS S
Sbjct: 476 STLMDRVISVEYALR--DDDEKRNGYSPERRGR------DRSPDRRDYRGRSAS 521
>gi|405974565|gb|EKC39200.1| RNA-binding protein 4 [Crassostrea gigas]
Length = 226
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M S +Y+GNLP R+ +++ +F YG++++ ++ YCF+ FEN +A+
Sbjct: 1 MPPSISTKLYIGNLPETCRKADLQKMFEAYGKVIECDIVR-----NYCFIHFENPNEAKM 55
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGG 101
A DG +F+G +L+VE++H S ++ G GG G
Sbjct: 56 AQANLDGVDFEGVKLKVEMSH-------SKVRQKPGMGGKG 89
>gi|224068024|ref|XP_002302651.1| predicted protein [Populus trichocarpa]
gi|222844377|gb|EEE81924.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 36/180 (20%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
+R ++VGN + R+ ++E LF KYGR+ +++K + FV FE+ RDA DA+RG
Sbjct: 1 MARPVFVGNFEHETRQSDLERLFSKYGRVERVDMK-----SGFAFVYFEDDRDAADAVRG 55
Query: 65 RDG--YNFDGCRLRVELAHGGSGR---GPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGI 119
D + +D RL VE A G GR GP S+
Sbjct: 56 LDNIPFGYDRRRLSVEWARGERGRHRDGPRST--------------------------AN 89
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVY 179
R ++ ++ P +D+K H + G+V + R+ Q T C +
Sbjct: 90 QRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTH 149
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 37/161 (22%)
Query: 49 FVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGA 108
FVEF++ RDA+DA+ +G + G R+ VE A RGP R YG +G +
Sbjct: 1 FVEFDDVRDADDAVYELNGKDLCGERVIVEHA-----RGPR---RDSSYG------SGRS 46
Query: 109 GAG---AGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQS 165
G G +G ++G +EYR+IV L S SWQDLKD+MR+AG+V +A+ + +
Sbjct: 47 GYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRK---- 102
Query: 166 PAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
GV+++ + DMK A+ KLD TE
Sbjct: 103 ----------------NEGVIEFKSYSDMKRALEKLDGTEV 127
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MSGR +++G LP D RE +VE +F +YGR+L ++K Y FV++E+ RDAED
Sbjct: 1 MSGRGQ--LFIGRLPLDTRERDVEQVFERYGRLLRCDVKYGT-GMAYAFVDYEDHRDAED 57
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRG 95
A++ +G G + VE A G S R + DR G
Sbjct: 58 AVKYENGREIRGQSVVVEWARGPSFRPSAGKDRMG 92
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 181 GTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVKRYD 221
GT G+VDYTN +DMKYAIRKLDD+EF+N +++ I VK YD
Sbjct: 3 GTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|353238715|emb|CCA70653.1| hypothetical protein PIIN_04589 [Piriformospora indica DSM 11827]
Length = 410
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 4 RFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIR 63
+ + +YVGNLP D RE +++D F ++G I IELK Y FV F++ + AE+A +
Sbjct: 45 KLANKVYVGNLPDDTREADLQDCFKEFGVIKSIELKT-----GYGFVAFDSRQAAEEAAK 99
Query: 64 GRDGYNFDGCRLRVELAHGGSGRG 87
+G +F G +RV AHG + G
Sbjct: 100 TYNGGSFLGNTIRVAPAHGTNKTG 123
>gi|302845634|ref|XP_002954355.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
gi|300260285|gb|EFJ44505.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
Length = 287
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IYVGNLP+DI E +V D F ++GR+ I + +PP + F+E E+ RDA DA+R DG+
Sbjct: 5 IYVGNLPADIAERDVRDEFERFGRVRTI--WVARKPPGFAFLEMEDDRDASDAVRKLDGF 62
Query: 69 N 69
Sbjct: 63 Q 63
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 41/199 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G+L + + +E F YG+I++++LK Y F+EF + DA+DA+ +G
Sbjct: 4 VYIGHLSNQAHKRNMEP-FKGYGKIVEVDLK-----NGYGFLEFGDVCDADDAVHELNGK 57
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVI 128
+ G + VE GP +G +G +G + G H+EYR+I
Sbjct: 58 DLCGDHVIVE-----HTWGPRCDSSYS------SGRSGYGYRRSGRDKNGPPTHTEYRLI 106
Query: 129 VRGLPSSASWQDLKDHMRKAGDVCFAEVS--RDSEGWQSPAMILLTLNFLCVYSGTYGVV 186
L +WQDLKD+M +AG+V +A+ R +E GV+
Sbjct: 107 DENLTGCCNWQDLKDYMHQAGEVTYADAHNGRKNE----------------------GVI 144
Query: 187 DYTNPEDMKYAIRKLDDTE 205
++ + DMK A+ LD TE
Sbjct: 145 EFKSYSDMKRALENLDGTE 163
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+GNL S ++E+E F +YG + D+ I PP + FV F++ DA+DA+ DG
Sbjct: 7 VYIGNLGSGAAKHEIEKEFARYGPLKDVW--IARNPPGFAFVVFDDPLDAQDAVEALDGR 64
Query: 69 NFDGCRLRVELAHGGS----GRGPSSSDRRGGYGG 99
G R+RVE+A G S R D RGGYGG
Sbjct: 65 RLCGARVRVEIARGDSHPSVKRSTGHRD-RGGYGG 98
>gi|222622077|gb|EEE56209.1| hypothetical protein OsJ_05182 [Oryza sativa Japonica Group]
Length = 290
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 43/234 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYGR+ +++K + FV E+ RDA++AI D
Sbjct: 13 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS-----GFAFVYMEDERDADEAIHRLD 67
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F G RLRVE + DR GG G +R ++
Sbjct: 68 RIEFGRKGRRLRVEW---------TKEDRSGGRRGNSKRSPNN------------TRPTK 106
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H + G + + R+ Q L + GT G
Sbjct: 107 TLFVINFDPINTRTRDLERHFDQYGKISNVRIRRNFAFVQ----YELQEDATKALEGTNG 162
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRN---PWARGRITVKRYDRSPSRSRSRSRSRS 235
++YA+R DD E RN P RGR DRSP R R RS S
Sbjct: 163 STLMDRVISVEYALR--DDDEKRNGYSPERRGR------DRSPDRRDYRGRSAS 208
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 15 VYVGNLGNNGNKTELERAFGYYGPLRSVW--VARNPPGFAFVEFEDPRDASDAVRELDGR 72
Query: 69 NFDGCRLRVELAHG---GSGRGPSSS 91
GCR+RVEL+ G RGP S
Sbjct: 73 TMCGCRVRVELSTGEKRSRSRGPPPS 98
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|307103428|gb|EFN51688.1| hypothetical protein CHLNCDRAFT_139931 [Chlorella variabilis]
Length = 187
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+++GNLP I + +VED+F K+GR+ + +PP + FVE+E+ RDAEDA+RG DG
Sbjct: 4 LWIGNLPPGIPDRDVEDVFAKFGRLRSCWVAR--KPPGFGFVEYEDRRDAEDAVRGTDGK 61
Query: 69 NFDGCRLRVELAHG 82
N G R+ A G
Sbjct: 62 N--GWRVEFARAAG 73
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP D E+E+ F +YG I + + RPP + F+EFE++RDA+DA++ +G
Sbjct: 17 VFVGGLPHDATTQELEEAFGRYGPIRKVWMA--RRPPGFAFIEFEDSRDADDAVKALNGA 74
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 75 RICGVRPRVEISH 87
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
Length = 151
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHG---GSGRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRNRNRGPPPS 95
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRDLDGR 133
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 134 TLCGCRVRVELSNG 147
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 49 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 106
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 107 TLCGCRVRVELSNGEKRSRNRGPPPS 132
>gi|341892188|gb|EGT48123.1| CBN-RSP-5 protein [Caenorhabditis brenneri]
gi|341901487|gb|EGT57422.1| hypothetical protein CAEBREN_20510 [Caenorhabditis brenneri]
Length = 204
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+Y+G +P + RE ++E YGRI +I +K + FV+FE++RDAEDA DG
Sbjct: 4 LYLGKIPYNARERDIERFLKGYGRITNISMKY-----GFAFVDFEDSRDAEDACHDLDGR 58
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGG 96
DG +RV + GR P SD RGG
Sbjct: 59 TMDGSSMRV-VVQMARGR-PRGSDARGG 84
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGR 65
+R I+VGN + R+ E+E LF KYGR+ +++K + FV FE+ RDA DAIRG
Sbjct: 2 ARPIFVGNFEFETRQSELERLFSKYGRVERVDMK-----SGFAFVYFEDERDAADAIRGL 56
Query: 66 DGYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHS 123
D +F D +L VE A G GR G+ R +
Sbjct: 57 DNISFGYDRRKLSVEWARGERGRHRD-----------------------GSRSMANQRPT 93
Query: 124 EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
+ ++ P +D+K H + G+V + R+ Q T C +
Sbjct: 94 KTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTHMTK- 152
Query: 184 GVVDYTNPEDMKYAIRKLDDTE 205
++D ++YA+R DD+E
Sbjct: 153 -ILDRVV--SVEYALR--DDSE 169
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGN D R+ ++E LF KYGR+ +++K Y FV FE+ RDAEDAIRG D
Sbjct: 2 RPVFVGNFDYDTRQSDLERLFSKYGRVERVDMKS-----GYAFVYFEDERDAEDAIRGTD 56
Query: 67 G--YNFDGCRLRVELAHGGSG 85
+ ++ +L VE A G G
Sbjct: 57 NTTFGYERRKLSVEWAKGFKG 77
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|115443899|ref|NP_001045729.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|41053015|dbj|BAD07946.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa
Japonica Group]
gi|113535260|dbj|BAF07643.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|215768223|dbj|BAH00452.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 43/234 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYGR+ +++K + FV E+ RDA++AI D
Sbjct: 2 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS-----GFAFVYMEDERDADEAIHRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
F G RLRVE + DR GG G +R ++
Sbjct: 57 RIEFGRKGRRLRVEW---------TKEDRSGGRRGNSKRSPNN------------TRPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H + G + + R+ Q L + GT G
Sbjct: 96 TLFVINFDPINTRTRDLERHFDQYGKISNVRIRRNFAFVQ----YELQEDATKALEGTNG 151
Query: 185 VVDYTNPEDMKYAIRKLDDTEFRN---PWARGRITVKRYDRSPSRSRSRSRSRS 235
++YA+R DD E RN P RGR DRSP R R RS S
Sbjct: 152 STLMDRVISVEYALR--DDDEKRNGYSPERRGR------DRSPDRRDYRGRSAS 197
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|297821068|ref|XP_002878417.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata
subsp. lyrata]
gi|297324255|gb|EFH54676.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata
subsp. lyrata]
Length = 264
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGN + R+ ++E LF KYGR+ +++K Y FV FE+ RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVERVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGR 86
+ F + RL VE A G GR
Sbjct: 57 NFPFGYEKRRLSVEWAKGERGR 78
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|82595824|ref|XP_726007.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481235|gb|EAA17572.1| similar to splicing factor, arginine/serine-rich 4, putative
[Plasmodium yoelii yoelii]
Length = 715
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
I+VGN+ D RE EV F KYG I++I+ K + F+E+ AE+AI G +G
Sbjct: 263 IFVGNISPDAREEEVRKKFSKYGDIINIQWK-----RRFAFIEYSKPVYAENAISGENGK 317
Query: 69 NFDGCRLRVELAH---GGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRF-GISRHSE 124
++ G L V+ H + S + Y +F I + +
Sbjct: 318 HYMGEELSVQAHHLSPFKNNYNNSYGNVYNNYRNDPRNYENKYSRNYSDNKFESIEKKNS 377
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
R++V+ + SWQDLKD R+ G + N YG
Sbjct: 378 LRIVVKNIDEKVSWQDLKDFGREVG---------------LVNYANVVYNNNGNNKEYYG 422
Query: 185 VVDYTNPEDMKYAIRKLDDTEF 206
+++Y N E MK AI L+ +F
Sbjct: 423 IIEYYNYETMKRAIDVLNGKKF 444
>gi|281338419|gb|EFB14003.1| hypothetical protein PANDA_002213 [Ailuropoda melanoleuca]
Length = 114
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L R ++E LF KYGRI ++ELK Y F+EF + RDA+DA DG
Sbjct: 13 LYVGRLSPRTRSRDLEYLFSKYGRIREVELKR-----DYAFIEFSDPRDADDAQYNLDGR 67
Query: 69 NFDGCRLRVELAHG 82
+ DG R+ VE A G
Sbjct: 68 DVDGSRIIVEFAKG 81
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
M +YVG+L S + E+E+ F YG + ++ + PP + FVEFE+ RDAED
Sbjct: 1 MPSSLDCKVYVGDLGSGASKQELEEAFSYYGPLRNV--WVARNPPGFAFVEFEDVRDAED 58
Query: 61 AIRGRDGYNFDGCRLRVELAHGGS 84
A+RG DG G R+RVEL+ G S
Sbjct: 59 AVRGLDGRTICGRRVRVELSTGKS 82
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 76 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 133
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 134 TLCGCRVRVELSNG 147
>gi|119624305|gb|EAX03900.1| splicing factor, arginine/serine-rich 3, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++ + ++E+ F YG + ++ + PP + FVEFE+ARDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L + + E+E F YG + + + PP + FVE+E+ARDAEDA++G DG
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSVWVAR--NPPGFAFVEYEDARDAEDAVKGMDGK 73
Query: 69 NFDGCRLRVELAHGGS 84
G R+RVEL++G S
Sbjct: 74 VLCGARVRVELSNGMS 89
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|148690657|gb|EDL22604.1| mCG21131, isoform CRA_b [Mus musculus]
Length = 129
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 41/202 (20%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGR--ILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
+Y+GNLP + + ++E F +G I +I+L + F+E+++ DA D + D
Sbjct: 9 LYLGNLPRNATKADIEAHFSTHGTGDIAEIKLMN-----GFGFIEYKDPMDARDVVP--D 61
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYR 126
G F G RL V+ A G R + GG GG G + A R R + +R
Sbjct: 62 GSTFLGERLTVQFARGNRHRENNGG--------GGGGGGGFNNDRSSAPR---PRRTPHR 110
Query: 127 VIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGV 185
+ + GLP SWQDLKD R G DV ++E R+ + G
Sbjct: 111 LQISGLPPDTSWQDLKDFARTPGLDVVYSETGRN--------------------GSSEGF 150
Query: 186 VDYTNPEDMKYAIRKLDDTEFR 207
V++ D++ A+ KL++ +F+
Sbjct: 151 VEFETAADLRTAVEKLNERDFK 172
>gi|268531628|ref|XP_002630941.1| C. briggsae CBR-RSP-5 protein [Caenorhabditis briggsae]
Length = 213
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G +P RE ++E YGRI +I +K + FV+FE+ RDAEDA DG
Sbjct: 4 IYLGKIPYHARERDIERFLKGYGRITNISMKY-----GFAFVDFEDYRDAEDACHDLDGK 58
Query: 69 NFDGCRLR--VELAHGGSGRGPSSSDRRGG 96
DG +R VE+A G P SD RGG
Sbjct: 59 TMDGSSMRVVVEMAKG----KPRGSDARGG 84
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R +G
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELNGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|383850973|ref|XP_003701038.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Megachile
rotundata]
Length = 206
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
+YVG+L S + E+ED F YG + ++ + PP + FVEFE+ARDAEDAIRG DG
Sbjct: 12 KVYVGDLGSSATKEELEDAFSYYGSLRNVW--VARNPPGFAFVEFEDARDAEDAIRGLDG 69
Query: 68 YNFDGCRLRVELAHG 82
G R RVE ++G
Sbjct: 70 RIICGRRARVEPSNG 84
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG+L S + ++ED F YG + ++ + PP + FVEFE+ RDAEDA+RG DG
Sbjct: 12 VYVGDLGSSASKQQLEDAFSYYGPLHNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 69
Query: 69 NFDGCRLRVELAHG 82
G R+RVEL++G
Sbjct: 70 IVCGRRIRVELSNG 83
>gi|24645765|ref|NP_524307.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|195499861|ref|XP_002097127.1| GE26048 [Drosophila yakuba]
gi|7299363|gb|AAF54555.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|194183228|gb|EDW96839.1| GE26048 [Drosophila yakuba]
gi|384217|prf||1905314A RNA-binding protein
Length = 135
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL S ++E+E F KYG + ++ + PP + FVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 NFDGCRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAI-RGRDG 67
+Y+G LP R+ ++E F K G I++IELK+ Y FVEF+N AE+++ + +G
Sbjct: 99 VYIGGLPEHTRKEDLESCFGKIGNIVNIELKV-----GYGFVEFDNREAAEESVAKYHEG 153
Query: 68 YNFDGCRLRVELAHGG 83
Y F G ++RVE++HGG
Sbjct: 154 Y-FMGNKIRVEISHGG 168
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG LP D E+E+ F +YG I + + RPP + F+EFE++RDA+DA++ +G
Sbjct: 12 VFVGGLPHDATTQELEEAFGRYGPIRKVWMAR--RPPGFAFIEFEDSRDADDAVKALNGA 69
Query: 69 NFDGCRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRPRVEISH 82
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 36/208 (17%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
IY+G L S + E ++E F YG+I D+ LK + FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK-----NGFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGA---------GRFGI 119
G R+ ++ + G G S RGG GG GG R+G
Sbjct: 60 ELGGERVILDYSKPRGGGGFSDRGGRGGGRVSSYGGGGGRDRFDRFDRGGPPKRESRYGR 119
Query: 120 SRHSEYRVIVRGLPSSASWQDLKDHMRKAG-DVCFAEVSRDSEGWQSPAMILLTLNFLCV 178
+ +RV+V L S SWQDLKD +R+ G + +AE + P LL
Sbjct: 120 PYSTRHRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK------RPNEALLC------ 167
Query: 179 YSGTYGVVDYTNPEDMKYAIRKLDDTEF 206
+ +P D+K I K D +
Sbjct: 168 ---------FASPTDLKRCIEKCDGMDL 186
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus
(Silurana) tropicalis]
Length = 234
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + + E+E F YG + + I PP + FVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVEL+ G
Sbjct: 71 VICGSRVRVELSTG 84
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32;
AltName: Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E LF +YGR+ D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRD-----YAFVEFSDPRDADDARYYLDGR 67
Query: 69 NFDGCRLRVELAHG 82
+FDG R+ VE + G
Sbjct: 68 DFDGSRITVEASRG 81
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKSELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 69 TLCGCRVRVELSNGEKRTRSRGPPPS 94
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 8 TIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDG 67
T+YVGN+ S E +++D F +YGR+ I IPP CFVE+++ RDAEDA RG
Sbjct: 6 TLYVGNISSRTTERDIKDEFGRYGRV--IRCYIPP-GKNICFVEYDDERDAEDAYRGMAS 62
Query: 68 YNFDGCRLRVELAHGG 83
DG L ++ A G
Sbjct: 63 ARVDGNTLNLQWAKAG 78
>gi|241648488|ref|XP_002410067.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215501503|gb|EEC10997.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 241
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
++VG L ++ + E+E F KYG + ++ + PP + FVEF++ RDA +AIR +G+
Sbjct: 79 VFVGGLGDNMAKEELEREFSKYGHL--SQVWVAQNPPGFAFVEFDDDRDANEAIRQMNGF 136
Query: 69 NFDGCRLRVE 78
+GC+LRVE
Sbjct: 137 VLNGCKLRVE 146
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 69 TLCGCRVRVELSNG 82
>gi|149043497|gb|EDL96948.1| rCG61099, isoform CRA_a [Rattus norvegicus]
Length = 129
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL++G RGP S
Sbjct: 70 TLCGCRVRVELSNGEKRSRNRGPPPS 95
>gi|224035701|gb|ACN36926.1| unknown [Zea mays]
gi|414588139|tpg|DAA38710.1| TPA: arginine/serine-rich splicing factor 2 [Zea mays]
Length = 239
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGR+ I++K Y FV FE+ RD DAIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRVERIDIKS-----GYAFVYFEDERDGNDAIRALD 56
Query: 67 GYNFDGCRLRVEL 79
GY F R R+ +
Sbjct: 57 GYPFGPGRRRLSV 69
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRSVWVAR--NPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGCRLRVELAHG 82
+ GCR+RVEL++G
Sbjct: 74 SLCGCRVRVELSNG 87
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 31 GRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGCRLRVELAHGGSGRGPSS 90
G+I +I+L + F+E+E+A DA D + DG +F G RL V+ A RGP
Sbjct: 8 GKITEIKLMN-----GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFA-----RGPR- 54
Query: 91 SDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAG- 149
R+ + G R + +R++V GLP + SWQDLKD R++G
Sbjct: 55 --RKENFPGP-----------PDRPNMPRPRRTIFRMLVSGLPET-SWQDLKDFARQSGL 100
Query: 150 DVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYGVVDYTNPEDMKYAIRKLDDTEFRNP 209
DV ++E R+ G V++ D+K AI KLD EF+
Sbjct: 101 DVVYSETGREQ---------------------GRGFVEFETAADLKTAIDKLDGREFKGS 139
Query: 210 WARGRITVKRYDRSPSRSRSRSRSRSRSRSRIVRRNRSKSLERSVS-RSVSRSMSASPVK 268
++ +D R RSRS RS I +R R S R+ R S P++
Sbjct: 140 RVSCVADIQPHDDRIFRDPYRSRSPRRSYPPIDEYDRRFPAPRGYSPRAHYRERSPVPLR 199
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 69 NFDGCRLRVELAHG 82
+ GCR+RVEL++G
Sbjct: 70 SLCGCRVRVELSNG 83
>gi|149390510|gb|ABR25316.1| splicing factor [Oryza sativa Indica Group]
Length = 209
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++EDLF +YGR+ +++K + FVEF +ARDA++A DG
Sbjct: 20 LYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE-----FAFVEFSDARDADEARYNLDGR 74
Query: 69 NFDGCRLRVELAHGGSGRGPSSS 91
+FDG R+ VE A G RGP S
Sbjct: 75 DFDGSRMIVEFAK-GVPRGPGGS 96
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED 60
MS R ++++G L R ++ED F KYGRIL ++K Y F++FE+ RDAED
Sbjct: 1 MSRRSQGSLFIGRLDKHTRTRDLEDRFEKYGRILRCDVKYGAEM-AYAFLDFEDHRDAED 59
Query: 61 AIRGRDGYNFDGCRLRVELAHGGSGRGPSSS 91
A++ +G + G + VE A G R SS
Sbjct: 60 ALKEENGREYQGVSMVVEWAKGAPRRQQSSQ 90
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 69 NFDGCRLRVELAHG 82
+ GCR+RVEL++G
Sbjct: 70 SLCGCRVRVELSNG 83
>gi|47680305|gb|AAT37136.1| arginine/serine-rich splicing factor 2 [Zea mays]
gi|47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [Zea mays]
Length = 239
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGR+ I++K Y FV FE+ RD DAIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRVERIDIK-----SGYAFVYFEDERDGNDAIRALD 56
Query: 67 GYNFDGCRLRVEL 79
GY F R R+ +
Sbjct: 57 GYPFGPGRRRLSV 69
>gi|384501386|gb|EIE91877.1| hypothetical protein RO3G_16588 [Rhizopus delemar RA 99-880]
Length = 184
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 6 SRTIYVGNLPSDIREYEVEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENARDAEDAI 62
S TIY GNLP D E +V +F +YGR+ I + + + + FVEFE RDAEDA
Sbjct: 108 STTIYAGNLPYDFVERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEERRDAEDAF 167
Query: 63 RGRDGYNFDGCRLRVE 78
DG++ +G RLR++
Sbjct: 168 EKFDGFSVEGRRLRLD 183
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + + E+E F YG + + I PP + FVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFGYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVEL+ G
Sbjct: 71 LISGSRVRVELSTG 84
>gi|336374485|gb|EGO02822.1| hypothetical protein SERLA73DRAFT_70307 [Serpula lacrymans var.
lacrymans S7.3]
Length = 520
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 2 SGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDA 61
+GR +YVG LP R+ ++ F K G I+++ELK+ Y FVEF+ AE++
Sbjct: 138 AGRLPNKVYVGGLPEHTRQEDLRSCFGKIGSIVNVELKV-----GYGFVEFDTKDAAEES 192
Query: 62 IRGRDGYNFDGCRLRVELAHGG 83
+ + +F G ++RVE++HGG
Sbjct: 193 VAKYNEGHFMGNKIRVEISHGG 214
>gi|194696906|gb|ACF82537.1| unknown [Zea mays]
gi|413935351|gb|AFW69902.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK + FV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G SS RR ++ ++
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTVGRKSSSRRSPTN---------------------TKPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H K G V + ++ Q + + GT G
Sbjct: 96 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQ----FEIQEDATRALEGTNG 151
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR----NPWARGRITVKRYDRSPSRSRSRS 231
++YA+R D+ R +P RGR +RSP R RS S
Sbjct: 152 SHFMDRVISVEYALRDDDEKGERGNGYSPDRRGR------ERSPGRRRSPS 196
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELERAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 69 TLCGCRVRVELSNG 82
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E +F +YGR+ D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYGRVRDVDMKR-----DYAFVEFSDPRDADDARYNLDGR 67
Query: 69 NFDGCRLRVELAHG 82
+ DG RL VE A G
Sbjct: 68 DVDGSRLIVEFAKG 81
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E LF +YGR+ D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRARDLERLFSRYGRVRDVDMKRD-----YAFVEFSDPRDADDARYYLDGR 67
Query: 69 NFDGCRLRVELAHG 82
+FDG R+ VE + G
Sbjct: 68 DFDGSRITVEASRG 81
>gi|353241704|emb|CCA73501.1| related to pre-mrna splicing factor srp55 [Piriformospora indica
DSM 11827]
Length = 194
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 48/204 (23%)
Query: 5 FSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRG 64
SR +YVG LP D+ +V F R+ ++ +I + F+EF+++ D + A+R
Sbjct: 1 MSRRLYVGKLPPDVNSEDVRRFFEDEARVKVVDCRIMT---GFGFIEFDSSEDMDTALR- 56
Query: 65 RDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
DG++F G + V++A R + R + R G++
Sbjct: 57 LDGHDFQGQPILVQVAREKPPRREPPREMR-----------------SSGRRQGVT---- 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKA-GDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTY 183
VIV + SWQDLKD R+A G V F+++ RD
Sbjct: 96 --VIVSNVSRDVSWQDLKDFGREAGGGVIFSDIDRDVP--------------------NQ 133
Query: 184 GVVDYTNPEDMKYAIRKLDDTEFR 207
G+++Y E+ + A+R+LD E R
Sbjct: 134 GILEYYTAEEAERAVRELDGRELR 157
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L ++ + ++E+ F YG + ++ + PP + FVEFE+ARDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 NFDGCRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 23/85 (27%)
Query: 123 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGT 182
+E+R+I+ LP S WQ LKD MR+ GDV +A + R
Sbjct: 17 TEHRIIISNLPESCKWQHLKDAMRQCGDVGYANIER-----------------------G 53
Query: 183 YGVVDYTNPEDMKYAIRKLDDTEFR 207
GVV++ N +DM YAI K D +EF+
Sbjct: 54 KGVVEFINRDDMLYAIEKFDGSEFK 78
>gi|148684205|gb|EDL16152.1| mCG21910 [Mus musculus]
Length = 163
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 11 VYVGNLGNNGNKTELEWAFGYYGPLRSV--WVARNPPGFAFVEFEDPRDAADAVRELDGR 68
Query: 69 NFDGCRLRVELAHG 82
GCR+RVEL++G
Sbjct: 69 TLCGCRVRVELSNG 82
>gi|432959076|ref|XP_004086176.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oryzias
latipes]
Length = 168
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ + E+E F YG + + + PP + FVEFE+ RDA DA+R DG
Sbjct: 16 VYVGNLGNNGNKTELERAFGYYGPLRTVWVAR--NPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 69 NFDGCRLRVELAHGGS---GRGPSSS 91
GCR+RVEL+ G RGP S
Sbjct: 74 TMCGCRVRVELSTGEKRSRSRGPPPS 99
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL ++ ++E F KYG + ++ + PP + FVE+E+ RDAEDA+R DG
Sbjct: 13 VYVGNLGNNTARGDLEASFSKYGALKNV--WVARNPPGFAFVEYEDPRDAEDAVRAMDGS 70
Query: 69 NFDGCRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RICGSRVRVEMSSG 84
>gi|375073655|gb|AFA34386.1| Rbp-1 RNA binding protein 1 isoform A, partial [Ostrea edulis]
Length = 123
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 11 VGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNF 70
+G+L +YE+ED+F +YG I ++ + PP + FVEF++ RD EDA + DG
Sbjct: 1 IGDLGYGAAKYELEDVFSRYGPIRNV--WVARNPPGFAFVEFQDTRDVEDATKALDGTRI 58
Query: 71 DGCRLRVELAHGGS 84
+G R+RVE++ G S
Sbjct: 59 NGRRVRVEMSSGKS 72
>gi|226494041|ref|NP_001147698.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195613160|gb|ACG28410.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195655913|gb|ACG47424.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYGR+ ++LK + FV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYNF--DGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAGGAGAGAGAGRFGISRHSE 124
G +F G R+RVE G SS RR ++ ++
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTVGRKSSSRRSPTN---------------------TKPTK 95
Query: 125 YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGWQSPAMILLTLNFLCVYSGTYG 184
++ P + +DL+ H K G V + ++ Q + + GT G
Sbjct: 96 TLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQ----FEVQEDATRALEGTNG 151
Query: 185 VVDYTNPEDMKYAIRKLDDTEFR----NPWARGRITVKRYDRSPSRSRSRS 231
++YA+R D+ R +P RGR +RSP R RS S
Sbjct: 152 SHFMDRVISVEYALRDDDEKGERGNGYSPDRRGR------ERSPGRRRSPS 196
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L S R ++E +F +YG + D+++K Y FVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYGSVRDVDMKHD-----YAFVEFRDPRDADDARYNLDGR 67
Query: 69 NFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGAGGAG 106
+ DG RL VE A G S D R G G G+G
Sbjct: 68 DIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGSG 105
>gi|242075010|ref|XP_002447441.1| hypothetical protein SORBIDRAFT_06g001100 [Sorghum bicolor]
gi|241938624|gb|EES11769.1| hypothetical protein SORBIDRAFT_06g001100 [Sorghum bicolor]
gi|448878272|gb|AGE46099.1| arginine/serine-rich splicing factor RS28 transcript I [Sorghum
bicolor]
Length = 238
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGR+ I++K + FV FE+ RD DAIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDQLFYRYGRVERIDMK-----SGFAFVYFEDERDGNDAIRALD 56
Query: 67 GYNFDGCRLRVEL 79
GY F R R+ +
Sbjct: 57 GYPFGPGRRRLSV 69
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea
mays]
Length = 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVG L R ++E LF KYGRI ++ELK Y F+EF + RDA+DA DG
Sbjct: 13 LYVGRLAPRTRSRDLEYLFSKYGRIREVELKRD-----YAFIEFSDPRDADDAQYNLDGR 67
Query: 69 NFDGCRLRVELAHG 82
DG R+ VE A G
Sbjct: 68 EVDGSRIIVEFAKG 81
>gi|115456922|ref|NP_001052061.1| Os04g0118900 [Oryza sativa Japonica Group]
gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa Japonica Group]
gi|113563632|dbj|BAF13975.1| Os04g0118900 [Oryza sativa Japonica Group]
gi|116317923|emb|CAH65946.1| H0716A07.4 [Oryza sativa Indica Group]
gi|218194243|gb|EEC76670.1| hypothetical protein OsI_14641 [Oryza sativa Indica Group]
gi|222628274|gb|EEE60406.1| hypothetical protein OsJ_13581 [Oryza sativa Japonica Group]
Length = 245
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGRI I++K + FV FE+ RD ++AIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRIDRIDMK-----SGFAFVYFEDERDGDEAIRALD 56
Query: 67 GYNFDGCRLRVELAHGGSGRGPSSSDRRGGY 97
GY F R R+ + RG RR GY
Sbjct: 57 GYPFGPGRRRLSVEWSRGDRG----SRRDGY 83
>gi|388506284|gb|AFK41208.1| unknown [Medicago truncatula]
Length = 249
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYGRI +++K + FV +E+ RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS-----GFAFVYYEDERDAEEAIRALD 56
Query: 67 GYNF--DGCRLRVELAHGGSGR 86
F D RL VE A G GR
Sbjct: 57 NIPFGHDKRRLSVEWARGERGR 78
>gi|47680295|gb|AAT37131.1| arginine/serine-rich splicing factor 1 [Zea mays]
gi|47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [Zea mays]
gi|195634831|gb|ACG36884.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 240
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 7 RTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRD 66
R ++VGNL D R E++ LFY+YGR+ I++K + FV FE+ RD DAIR D
Sbjct: 2 RPVFVGNLDYDTRHSELDHLFYRYGRVERIDMKS-----GFAFVYFEDERDGSDAIRALD 56
Query: 67 GYNFDGCRLRVEL 79
GY F R R+ +
Sbjct: 57 GYPFGPGRRRLSV 69
>gi|47227155|emb|CAG00517.1| unnamed protein product [Tetraodon nigroviridis]
Length = 82
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENAR 56
IYVGNLP DIR ++EDLFYK+G I DI+LK P + FVEFE+ R
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPR 64
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 IYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
+YVGNL + + E+E F YG + + I PP + FVEFE+ RDAEDA+RG DG
Sbjct: 41 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 69 NFDGCRLRVELAHG 82
G R+RVEL+ G
Sbjct: 99 VICGSRVRVELSTG 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,891,407,174
Number of Sequences: 23463169
Number of extensions: 238788067
Number of successful extensions: 4253234
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14720
Number of HSP's successfully gapped in prelim test: 19713
Number of HSP's that attempted gapping in prelim test: 2998121
Number of HSP's gapped (non-prelim): 858145
length of query: 289
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 148
effective length of database: 9,050,888,538
effective search space: 1339531503624
effective search space used: 1339531503624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)