Query 022982
Match_columns 289
No_of_seqs 114 out of 173
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 14:22:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022982.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022982hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qwg_A PSL synthase;, (2R)-pho 100.0 4.1E-93 1.4E-97 652.7 23.2 234 19-279 8-249 (251)
2 1u83_A Phosphosulfolactate syn 100.0 5.6E-92 1.9E-96 651.5 19.3 241 8-278 23-272 (276)
3 1ydn_A Hydroxymethylglutaryl-C 96.2 0.059 2E-06 49.0 12.5 161 39-230 81-262 (295)
4 3lmz_A Putative sugar isomeras 96.2 0.052 1.8E-06 47.1 11.6 127 102-263 31-167 (257)
5 3f4w_A Putative hexulose 6 pho 96.1 0.056 1.9E-06 46.0 11.1 144 39-229 11-158 (211)
6 3qc0_A Sugar isomerase; TIM ba 95.9 0.043 1.5E-06 47.3 9.6 140 102-263 19-181 (275)
7 3cqj_A L-ribulose-5-phosphate 95.7 0.1 3.5E-06 46.0 11.5 144 102-262 31-199 (295)
8 3p6l_A Sugar phosphate isomera 95.6 0.17 5.7E-06 43.8 12.4 101 102-237 23-135 (262)
9 1olt_A Oxygen-independent copr 95.6 0.18 6.1E-06 48.6 13.6 123 54-205 105-240 (457)
10 2ftp_A Hydroxymethylglutaryl-C 95.6 0.16 5.6E-06 46.5 12.7 158 40-230 86-266 (302)
11 2q02_A Putative cytoplasmic pr 95.5 0.31 1.1E-05 41.9 13.7 139 102-264 20-175 (272)
12 1yx1_A Hypothetical protein PA 95.3 0.13 4.5E-06 44.7 10.7 131 102-260 24-164 (264)
13 3l5l_A Xenobiotic reductase A; 95.3 0.026 8.8E-07 53.3 6.5 139 71-251 210-363 (363)
14 2cw6_A Hydroxymethylglutaryl-C 95.3 0.12 4.2E-06 47.1 10.9 159 39-230 82-263 (298)
15 3ble_A Citramalate synthase fr 95.1 0.14 4.7E-06 47.9 10.7 156 41-228 100-268 (337)
16 1rqb_A Transcarboxylase 5S sub 95.1 0.33 1.1E-05 48.7 14.0 93 103-226 119-211 (539)
17 3kws_A Putative sugar isomeras 94.9 0.2 6.8E-06 43.9 10.7 144 102-264 39-203 (287)
18 1tv8_A MOAA, molybdenum cofact 94.8 0.43 1.5E-05 43.4 13.0 101 39-152 51-168 (340)
19 2nx9_A Oxaloacetate decarboxyl 94.6 0.28 9.7E-06 48.2 11.8 95 102-227 101-195 (464)
20 1ep3_A Dihydroorotate dehydrog 94.5 0.34 1.2E-05 43.5 11.5 74 40-123 110-198 (311)
21 1f76_A Dihydroorotate dehydrog 94.5 0.44 1.5E-05 43.8 12.3 80 40-126 152-250 (336)
22 3bw2_A 2-nitropropane dioxygen 94.4 0.49 1.7E-05 44.2 12.5 65 102-207 110-174 (369)
23 2x7v_A Probable endonuclease 4 94.4 0.28 9.4E-06 42.6 10.2 143 102-261 13-180 (287)
24 3qja_A IGPS, indole-3-glycerol 94.1 0.39 1.3E-05 43.8 10.9 116 102-256 122-240 (272)
25 3ewb_X 2-isopropylmalate synth 94.1 0.27 9.4E-06 45.1 10.0 154 42-226 81-250 (293)
26 3iix_A Biotin synthetase, puta 93.9 0.95 3.3E-05 41.0 13.2 131 39-204 85-227 (348)
27 3aal_A Probable endonuclease 4 93.9 0.2 6.8E-06 44.5 8.4 143 102-263 19-187 (303)
28 1rvg_A Fructose-1,6-bisphospha 93.8 0.98 3.4E-05 42.3 13.3 202 40-272 27-246 (305)
29 1r30_A Biotin synthase; SAM ra 93.7 0.78 2.7E-05 42.5 12.4 129 39-204 100-244 (369)
30 2ftp_A Hydroxymethylglutaryl-C 93.7 0.35 1.2E-05 44.3 9.8 100 104-228 86-197 (302)
31 3p6l_A Sugar phosphate isomera 93.7 0.26 8.9E-06 42.6 8.5 101 42-151 23-136 (262)
32 3zwt_A Dihydroorotate dehydrog 93.5 1.6 5.5E-05 41.4 14.4 77 42-127 162-260 (367)
33 1ydo_A HMG-COA lyase; TIM-barr 93.3 0.43 1.5E-05 44.1 9.8 157 40-229 84-263 (307)
34 2g0w_A LMO2234 protein; putati 93.2 0.77 2.6E-05 40.6 11.1 136 102-260 37-185 (296)
35 2hk0_A D-psicose 3-epimerase; 93.2 0.91 3.1E-05 40.2 11.6 146 102-263 38-207 (309)
36 2zvr_A Uncharacterized protein 93.2 0.44 1.5E-05 41.8 9.5 144 102-262 42-205 (290)
37 3na8_A Putative dihydrodipicol 93.2 1.9 6.5E-05 39.8 14.0 145 101-275 45-225 (315)
38 3q58_A N-acetylmannosamine-6-p 93.1 0.29 1E-05 43.4 8.1 84 107-226 94-179 (229)
39 1i4n_A Indole-3-glycerol phosp 93.0 0.47 1.6E-05 43.0 9.5 108 107-254 116-226 (251)
40 2vc6_A MOSA, dihydrodipicolina 93.0 2.4 8.3E-05 38.5 14.4 144 101-275 21-201 (292)
41 1qtw_A Endonuclease IV; DNA re 93.0 0.4 1.4E-05 41.5 8.7 145 102-261 13-181 (285)
42 3tha_A Tryptophan synthase alp 92.9 0.77 2.6E-05 41.8 10.7 138 39-215 26-182 (252)
43 1ydn_A Hydroxymethylglutaryl-C 92.8 0.48 1.6E-05 42.9 9.3 98 105-227 83-192 (295)
44 3aam_A Endonuclease IV, endoiv 92.8 0.84 2.9E-05 39.5 10.6 128 102-250 15-162 (270)
45 3obe_A Sugar phosphate isomera 92.7 0.42 1.4E-05 43.0 8.7 88 102-206 37-135 (305)
46 2nx9_A Oxaloacetate decarboxyl 92.6 1.1 3.8E-05 44.0 12.1 149 44-231 103-259 (464)
47 3gr7_A NADPH dehydrogenase; fl 92.5 0.2 6.8E-06 46.9 6.5 121 71-231 196-327 (340)
48 3igs_A N-acetylmannosamine-6-p 92.4 0.45 1.5E-05 42.2 8.3 85 107-227 94-180 (232)
49 2p10_A MLL9387 protein; putati 92.4 0.79 2.7E-05 42.7 10.2 113 102-250 109-249 (286)
50 1pii_A N-(5'phosphoribosyl)ant 92.3 0.7 2.4E-05 45.3 10.3 110 107-256 123-234 (452)
51 3vni_A Xylose isomerase domain 92.3 0.57 1.9E-05 40.9 8.8 146 102-263 18-188 (294)
52 1nvm_A HOA, 4-hydroxy-2-oxoval 92.2 0.74 2.5E-05 42.9 9.9 164 26-229 85-250 (345)
53 3si9_A DHDPS, dihydrodipicolin 92.1 4.7 0.00016 37.2 15.2 145 101-275 43-223 (315)
54 2z6i_A Trans-2-enoyl-ACP reduc 92.1 0.48 1.6E-05 43.7 8.5 131 42-228 27-161 (332)
55 1jub_A Dihydroorotate dehydrog 92.1 1.4 4.7E-05 39.8 11.4 49 68-124 142-195 (311)
56 3vnd_A TSA, tryptophan synthas 91.9 1.7 5.8E-05 39.6 11.7 102 40-148 31-153 (267)
57 3tsm_A IGPS, indole-3-glycerol 91.8 2.4 8.1E-05 38.8 12.6 111 107-256 135-247 (272)
58 3bo9_A Putative nitroalkan dio 91.7 3.9 0.00013 37.7 14.1 133 42-228 41-175 (326)
59 3eeg_A 2-isopropylmalate synth 91.7 0.37 1.2E-05 45.0 7.2 125 71-226 123-251 (325)
60 1i60_A IOLI protein; beta barr 91.6 0.38 1.3E-05 41.3 6.8 140 102-261 15-176 (278)
61 2ekc_A AQ_1548, tryptophan syn 91.6 2.1 7E-05 38.3 11.8 112 26-148 20-152 (262)
62 3d0c_A Dihydrodipicolinate syn 91.4 1.1 3.8E-05 41.4 10.0 161 82-275 13-210 (314)
63 3b8i_A PA4872 oxaloacetate dec 91.4 1.7 6E-05 40.1 11.3 120 105-257 101-231 (287)
64 3ivs_A Homocitrate synthase, m 91.3 0.83 2.8E-05 44.5 9.4 146 41-222 114-272 (423)
65 4a29_A Engineered retro-aldol 91.2 3.1 0.00011 38.1 12.6 130 103-273 114-250 (258)
66 3qze_A DHDPS, dihydrodipicolin 91.2 6.1 0.00021 36.4 14.9 145 101-276 44-224 (314)
67 3eb2_A Putative dihydrodipicol 91.1 2.6 9E-05 38.5 12.3 143 101-275 25-204 (300)
68 1z41_A YQJM, probable NADH-dep 91.0 0.18 6E-06 46.9 4.2 119 71-229 196-325 (338)
69 3t7v_A Methylornithine synthas 90.9 3.2 0.00011 37.9 12.7 130 39-205 92-237 (350)
70 3vav_A 3-methyl-2-oxobutanoate 90.8 0.66 2.3E-05 42.9 7.9 94 110-230 116-209 (275)
71 2qul_A D-tagatose 3-epimerase; 90.7 1.2 4E-05 38.6 9.1 146 102-263 18-189 (290)
72 2gjl_A Hypothetical protein PA 90.5 1.7 5.9E-05 39.7 10.5 138 42-228 30-171 (328)
73 3f4w_A Putative hexulose 6 pho 90.5 0.78 2.7E-05 38.8 7.6 125 39-213 65-194 (211)
74 2cw6_A Hydroxymethylglutaryl-C 90.5 0.9 3.1E-05 41.4 8.4 144 44-226 33-192 (298)
75 3nav_A Tryptophan synthase alp 90.3 1.9 6.5E-05 39.3 10.5 141 39-218 32-194 (271)
76 1oy0_A Ketopantoate hydroxymet 90.3 0.62 2.1E-05 43.2 7.2 99 106-231 118-216 (281)
77 3ble_A Citramalate synthase fr 90.3 1.1 3.9E-05 41.7 9.2 141 46-227 50-206 (337)
78 3cny_A Inositol catabolism pro 90.3 0.4 1.4E-05 41.8 5.7 136 102-263 32-194 (301)
79 1gte_A Dihydropyrimidine dehyd 90.2 1.7 5.7E-05 46.1 11.3 78 40-124 647-738 (1025)
80 3b4u_A Dihydrodipicolinate syn 90.1 2.2 7.6E-05 38.8 10.7 78 102-206 25-106 (294)
81 2qw5_A Xylose isomerase-like T 90.0 1.5 5.2E-05 39.3 9.5 44 105-148 35-86 (335)
82 3ajx_A 3-hexulose-6-phosphate 89.9 2.4 8.1E-05 35.6 10.0 94 39-145 11-105 (207)
83 3ih1_A Methylisocitrate lyase; 89.7 1.3 4.4E-05 41.3 8.9 96 103-230 106-212 (305)
84 3dx5_A Uncharacterized protein 89.6 0.55 1.9E-05 40.8 6.0 47 102-148 16-66 (286)
85 3ewb_X 2-isopropylmalate synth 89.6 1.5 5E-05 40.2 9.1 143 42-226 31-186 (293)
86 1rqb_A Transcarboxylase 5S sub 89.5 1.3 4.3E-05 44.5 9.2 147 49-229 126-276 (539)
87 3ngf_A AP endonuclease, family 89.4 3.5 0.00012 35.6 11.1 144 102-263 24-189 (269)
88 2ehh_A DHDPS, dihydrodipicolin 89.4 2.1 7.3E-05 38.9 10.0 144 101-275 21-201 (294)
89 3eoo_A Methylisocitrate lyase; 89.4 1.3 4.3E-05 41.3 8.6 116 78-229 78-207 (298)
90 3lmz_A Putative sugar isomeras 89.2 1.2 4.2E-05 38.3 8.0 100 43-151 32-134 (257)
91 3tva_A Xylose isomerase domain 89.2 0.23 7.8E-06 43.5 3.3 151 102-263 22-188 (290)
92 1vhn_A Putative flavin oxidore 89.2 0.9 3.1E-05 41.6 7.4 79 39-125 69-164 (318)
93 3igs_A N-acetylmannosamine-6-p 89.2 1.5 5E-05 38.8 8.5 119 42-211 93-215 (232)
94 3b0p_A TRNA-dihydrouridine syn 89.0 1.1 3.8E-05 41.8 8.0 98 40-142 69-194 (350)
95 2czd_A Orotidine 5'-phosphate 89.0 2.3 8E-05 36.3 9.5 48 76-123 93-141 (208)
96 3hgj_A Chromate reductase; TIM 89.0 4.8 0.00016 37.4 12.3 83 103-206 154-260 (349)
97 1tv5_A Dhodehase, dihydroorota 88.9 5.9 0.0002 38.6 13.3 78 102-210 312-407 (443)
98 3n9r_A Fructose-bisphosphate a 88.9 5.9 0.0002 37.0 12.7 197 39-263 26-241 (307)
99 3a5f_A Dihydrodipicolinate syn 88.9 2.6 8.7E-05 38.3 10.1 142 102-275 23-201 (291)
100 1o66_A 3-methyl-2-oxobutanoate 88.8 1.3 4.4E-05 41.0 8.1 92 113-231 107-198 (275)
101 3u0h_A Xylose isomerase domain 88.6 0.55 1.9E-05 40.4 5.3 139 102-262 17-182 (281)
102 3ktc_A Xylose isomerase; putat 88.6 5 0.00017 36.1 11.8 70 56-147 7-78 (333)
103 1f6k_A N-acetylneuraminate lya 88.5 2.4 8.1E-05 38.6 9.6 141 102-275 25-203 (293)
104 2isw_A Putative fructose-1,6-b 88.4 4.6 0.00016 38.1 11.7 146 105-272 89-248 (323)
105 1m3u_A 3-methyl-2-oxobutanoate 88.4 1.1 3.6E-05 41.2 7.2 93 113-231 106-198 (264)
106 3c8f_A Pyruvate formate-lyase 88.4 6.3 0.00022 32.9 11.7 102 40-152 52-169 (245)
107 3rmj_A 2-isopropylmalate synth 88.3 1.3 4.5E-05 42.0 8.1 141 54-225 101-256 (370)
108 2rfg_A Dihydrodipicolinate syn 88.3 2.5 8.7E-05 38.5 9.7 143 101-275 21-200 (297)
109 1xg4_A Probable methylisocitra 88.2 2.6 8.7E-05 39.0 9.7 92 108-229 101-203 (295)
110 3e96_A Dihydrodipicolinate syn 88.2 2.5 8.6E-05 38.9 9.7 163 82-275 13-210 (316)
111 1ydo_A HMG-COA lyase; TIM-barr 88.2 1.5 5.3E-05 40.4 8.2 148 43-228 33-195 (307)
112 3b0p_A TRNA-dihydrouridine syn 88.1 1.6 5.3E-05 40.9 8.3 105 100-228 69-195 (350)
113 2yxg_A DHDPS, dihydrodipicolin 88.1 2.9 9.9E-05 37.9 9.9 142 101-275 21-199 (289)
114 2wkj_A N-acetylneuraminate lya 88.1 2.8 9.6E-05 38.3 9.9 142 101-275 32-211 (303)
115 1nvm_A HOA, 4-hydroxy-2-oxoval 88.0 2.1 7.2E-05 39.8 9.2 92 103-227 95-186 (345)
116 3l23_A Sugar phosphate isomera 88.0 1.7 5.9E-05 38.8 8.3 47 102-148 30-77 (303)
117 2r91_A 2-keto-3-deoxy-(6-phosp 88.0 2.5 8.7E-05 38.2 9.5 76 102-206 20-98 (286)
118 2e6f_A Dihydroorotate dehydrog 87.8 2.4 8.2E-05 38.3 9.2 77 41-124 106-198 (314)
119 3hgj_A Chromate reductase; TIM 87.8 0.61 2.1E-05 43.6 5.4 121 71-231 204-338 (349)
120 1xky_A Dihydrodipicolinate syn 87.7 3.6 0.00012 37.6 10.4 143 101-275 33-212 (301)
121 2qjg_A Putative aldolase MJ040 87.7 2.3 8E-05 37.4 8.8 144 40-226 102-255 (273)
122 3tak_A DHDPS, dihydrodipicolin 87.6 4.8 0.00016 36.5 11.1 145 101-276 22-202 (291)
123 2ojp_A DHDPS, dihydrodipicolin 87.5 2.5 8.6E-05 38.4 9.2 142 102-275 23-201 (292)
124 1o5k_A DHDPS, dihydrodipicolin 87.5 3.1 0.00011 38.1 9.8 144 101-275 33-216 (306)
125 3l5l_A Xenobiotic reductase A; 87.5 2.5 8.4E-05 39.7 9.3 87 102-208 159-269 (363)
126 3m5v_A DHDPS, dihydrodipicolin 87.4 4 0.00014 37.2 10.5 146 101-275 28-208 (301)
127 3bg3_A Pyruvate carboxylase, m 87.0 6 0.00021 40.9 12.6 147 53-231 210-363 (718)
128 3q58_A N-acetylmannosamine-6-p 87.0 2.4 8.1E-05 37.5 8.5 119 42-211 93-215 (229)
129 2v9d_A YAGE; dihydrodipicolini 86.9 5.5 0.00019 37.2 11.3 143 102-275 53-235 (343)
130 1jub_A Dihydroorotate dehydrog 86.8 2.6 9E-05 37.9 8.9 79 102-207 107-194 (311)
131 2h6r_A Triosephosphate isomera 86.7 3.1 0.0001 36.3 8.9 114 107-256 75-197 (219)
132 1w3i_A EDA, 2-keto-3-deoxy glu 86.5 2.6 9E-05 38.3 8.7 77 102-207 21-100 (293)
133 3kws_A Putative sugar isomeras 86.4 7.3 0.00025 33.7 11.3 105 42-150 39-166 (287)
134 2ztj_A Homocitrate synthase; ( 86.4 11 0.00038 35.5 13.3 140 43-226 30-180 (382)
135 2nuw_A 2-keto-3-deoxygluconate 86.3 2.6 8.9E-05 38.3 8.5 108 102-238 21-132 (288)
136 3qja_A IGPS, indole-3-glycerol 86.3 2 6.9E-05 39.0 7.8 111 68-226 147-260 (272)
137 2zds_A Putative DNA-binding pr 86.0 0.89 3E-05 40.4 5.2 149 102-263 16-214 (340)
138 3daq_A DHDPS, dihydrodipicolin 85.8 4.1 0.00014 37.0 9.6 144 101-275 23-203 (292)
139 2r8w_A AGR_C_1641P; APC7498, d 85.7 4.1 0.00014 37.9 9.7 142 102-275 56-238 (332)
140 3i65_A Dihydroorotate dehydrog 85.6 9.8 0.00034 36.9 12.6 75 43-125 198-307 (415)
141 1z41_A YQJM, probable NADH-dep 85.6 8.2 0.00028 35.5 11.7 85 103-208 146-252 (338)
142 3bg3_A Pyruvate carboxylase, m 85.3 4.6 0.00016 41.8 10.7 100 103-227 199-298 (718)
143 3ipw_A Hydrolase TATD family p 85.3 20 0.00067 33.4 14.2 169 22-241 62-250 (325)
144 3l21_A DHDPS, dihydrodipicolin 85.3 7.7 0.00026 35.5 11.3 142 101-275 36-213 (304)
145 3s5o_A 4-hydroxy-2-oxoglutarat 85.0 4.4 0.00015 37.1 9.5 143 102-275 36-217 (307)
146 3dz1_A Dihydrodipicolinate syn 85.0 4.4 0.00015 37.2 9.5 148 101-275 29-215 (313)
147 3ivs_A Homocitrate synthase, m 85.0 3.4 0.00012 40.1 9.1 140 42-228 65-218 (423)
148 3cpr_A Dihydrodipicolinate syn 85.0 5.8 0.0002 36.3 10.3 159 82-275 18-214 (304)
149 2a5h_A L-lysine 2,3-aminomutas 84.9 12 0.00041 35.6 12.8 139 39-206 146-291 (416)
150 1hjs_A Beta-1,4-galactanase; 4 84.8 3.2 0.00011 38.4 8.5 64 79-154 15-84 (332)
151 2hmc_A AGR_L_411P, dihydrodipi 84.8 4.1 0.00014 38.2 9.3 77 102-207 48-127 (344)
152 3flu_A DHDPS, dihydrodipicolin 84.7 11 0.00037 34.3 11.9 145 101-276 28-208 (297)
153 1y0e_A Putative N-acetylmannos 84.5 3.4 0.00012 35.0 8.0 90 104-228 78-174 (223)
154 3jr2_A Hexulose-6-phosphate sy 84.4 5.2 0.00018 34.3 9.2 92 39-145 17-111 (218)
155 1k77_A EC1530, hypothetical pr 84.3 2.3 7.8E-05 36.2 6.8 141 102-262 16-181 (260)
156 3q94_A Fructose-bisphosphate a 84.0 15 0.00051 33.9 12.6 162 40-230 31-207 (288)
157 3qfe_A Putative dihydrodipicol 83.5 5.4 0.00018 36.8 9.4 79 101-206 32-114 (318)
158 2hjp_A Phosphonopyruvate hydro 83.5 6.7 0.00023 36.1 10.0 98 104-229 93-203 (290)
159 3rcm_A TATD family hydrolase; 83.4 11 0.00038 34.1 11.4 170 22-240 27-211 (287)
160 3sz8_A 2-dehydro-3-deoxyphosph 83.3 2.1 7.2E-05 39.6 6.5 147 50-228 107-269 (285)
161 2qiw_A PEP phosphonomutase; st 83.2 7.1 0.00024 35.2 9.9 97 112-234 104-210 (255)
162 4e38_A Keto-hydroxyglutarate-a 83.0 3.5 0.00012 36.9 7.7 163 62-273 14-196 (232)
163 2ztj_A Homocitrate synthase; ( 82.9 7.5 0.00026 36.8 10.4 146 43-222 80-238 (382)
164 3tva_A Xylose isomerase domain 82.8 3.9 0.00013 35.5 7.8 108 42-151 25-160 (290)
165 1fob_A Beta-1,4-galactanase; B 82.8 4.4 0.00015 37.4 8.5 48 104-153 30-83 (334)
166 1gvf_A Tagatose-bisphosphate a 82.5 30 0.001 31.8 14.3 146 56-230 46-203 (286)
167 3gr7_A NADPH dehydrogenase; fl 82.3 12 0.0004 34.8 11.3 83 103-206 143-250 (340)
168 1q6o_A Humps, 3-keto-L-gulonat 82.2 2.5 8.7E-05 36.2 6.3 37 39-75 14-50 (216)
169 1qop_A Tryptophan synthase alp 82.2 26 0.0009 31.0 14.0 102 40-148 30-152 (268)
170 3m47_A Orotidine 5'-phosphate 82.1 0.86 2.9E-05 40.2 3.3 94 39-144 23-118 (228)
171 4e38_A Keto-hydroxyglutarate-a 82.1 1.1 3.7E-05 40.2 4.0 97 73-225 117-223 (232)
172 3vk5_A MOEO5; TIM barrel, tran 81.5 2.5 8.5E-05 39.3 6.3 161 23-229 38-276 (286)
173 1y0e_A Putative N-acetylmannos 81.4 20 0.00067 30.2 11.6 122 40-211 78-209 (223)
174 1s2w_A Phosphoenolpyruvate pho 81.2 9.8 0.00033 35.1 10.2 95 107-229 100-207 (295)
175 3fkr_A L-2-keto-3-deoxyarabona 81.2 7.7 0.00026 35.5 9.5 147 102-275 30-214 (309)
176 3ctl_A D-allulose-6-phosphate 81.0 3.8 0.00013 36.3 7.1 131 42-225 72-214 (231)
177 1wa3_A 2-keto-3-deoxy-6-phosph 80.9 9.3 0.00032 31.9 9.2 110 39-211 72-183 (205)
178 3m6y_A 4-hydroxy-2-oxoglutarat 80.9 6.5 0.00022 36.2 8.6 99 39-150 123-243 (275)
179 2ze3_A DFA0005; organic waste 80.9 16 0.00054 33.3 11.4 97 108-229 99-204 (275)
180 2vtf_A Endo-beta-N-acetylgluco 80.8 3.9 0.00013 41.7 8.0 90 50-143 88-201 (626)
181 3ru6_A Orotidine 5'-phosphate 80.8 5.5 0.00019 37.1 8.4 134 66-238 112-259 (303)
182 3fa4_A 2,3-dimethylmalate lyas 80.7 2.4 8.2E-05 39.5 5.9 132 103-264 97-243 (302)
183 1zzm_A Putative deoxyribonucle 80.6 24 0.00083 30.0 12.1 168 22-240 29-209 (259)
184 4fo4_A Inosine 5'-monophosphat 80.3 10 0.00035 35.9 10.3 91 67-204 79-176 (366)
185 1xwy_A DNAse TATD, deoxyribonu 80.2 25 0.00086 30.0 12.0 169 22-240 29-209 (264)
186 3m6y_A 4-hydroxy-2-oxoglutarat 80.0 13 0.00045 34.2 10.3 64 42-118 172-239 (275)
187 4gqr_A Pancreatic alpha-amylas 79.9 1.3 4.4E-05 41.3 3.8 47 104-150 26-97 (496)
188 3h5d_A DHDPS, dihydrodipicolin 79.8 20 0.00069 32.8 11.8 145 100-275 27-207 (311)
189 3lab_A Putative KDPG (2-keto-3 79.8 6 0.00021 35.2 8.0 68 102-206 26-93 (217)
190 1f6y_A 5-methyltetrahydrofolat 79.7 11 0.00038 33.9 9.9 101 42-145 30-153 (262)
191 3r2g_A Inosine 5'-monophosphat 79.7 5.5 0.00019 37.9 8.1 65 102-204 100-168 (361)
192 2qf7_A Pyruvate carboxylase pr 79.6 9.9 0.00034 41.2 11.0 102 102-228 646-747 (1165)
193 3kru_A NADH:flavin oxidoreduct 79.6 2.2 7.5E-05 40.0 5.3 107 68-210 192-311 (343)
194 3m0z_A Putative aldolase; MCSG 79.5 7.1 0.00024 35.5 8.3 38 189-226 203-242 (249)
195 3lye_A Oxaloacetate acetyl hyd 79.3 3.6 0.00012 38.4 6.6 125 103-257 105-244 (307)
196 4dpp_A DHDPS 2, dihydrodipicol 79.2 11 0.00038 35.7 10.1 101 79-206 58-162 (360)
197 3rmj_A 2-isopropylmalate synth 78.9 5.5 0.00019 37.7 7.9 94 102-226 88-193 (370)
198 1ka9_F Imidazole glycerol phos 78.8 8.8 0.0003 33.0 8.6 95 102-234 32-127 (252)
199 3t7v_A Methylornithine synthas 78.7 18 0.00062 32.8 11.1 96 41-145 126-232 (350)
200 1f76_A Dihydroorotate dehydrog 78.7 15 0.0005 33.4 10.5 81 102-208 151-248 (336)
201 1h5y_A HISF; histidine biosynt 78.2 6 0.0002 33.5 7.3 42 101-142 33-75 (253)
202 3hbl_A Pyruvate carboxylase; T 78.2 15 0.00053 39.7 12.0 102 103-228 629-730 (1150)
203 2p0o_A Hypothetical protein DU 78.2 11 0.00038 36.1 9.8 152 83-270 6-199 (372)
204 1zlp_A PSR132, petal death pro 77.9 4.8 0.00016 37.7 7.0 96 105-230 120-226 (318)
205 1ep3_A Dihydroorotate dehydrog 77.8 2 6.9E-05 38.3 4.3 75 102-206 112-197 (311)
206 3gg7_A Uncharacterized metallo 77.7 19 0.00066 32.1 10.8 164 22-240 24-198 (254)
207 3qxb_A Putative xylose isomera 77.7 4.1 0.00014 36.1 6.3 146 102-261 36-215 (316)
208 1jcn_A Inosine monophosphate d 77.6 22 0.00074 34.5 11.9 114 42-206 259-388 (514)
209 3m0z_A Putative aldolase; MCSG 77.1 15 0.00053 33.3 9.8 103 39-151 101-221 (249)
210 2j6v_A UV endonuclease, UVDE; 77.0 12 0.00039 34.2 9.2 135 97-251 57-215 (301)
211 3cqj_A L-ribulose-5-phosphate 76.9 8.3 0.00028 33.5 8.0 109 42-150 31-167 (295)
212 2qf7_A Pyruvate carboxylase pr 76.9 24 0.00083 38.2 13.0 147 53-231 658-810 (1165)
213 1yxy_A Putative N-acetylmannos 76.5 5.5 0.00019 34.1 6.6 39 104-142 91-130 (234)
214 1yxy_A Putative N-acetylmannos 76.5 34 0.0012 29.0 13.0 120 102-254 37-156 (234)
215 1wv2_A Thiazole moeity, thiazo 76.5 25 0.00085 32.3 11.2 177 39-260 31-221 (265)
216 3guw_A Uncharacterized protein 76.4 11 0.00039 33.6 8.9 177 21-241 20-210 (261)
217 1ujp_A Tryptophan synthase alp 76.4 43 0.0015 30.1 14.2 103 39-148 28-149 (271)
218 3tfx_A Orotidine 5'-phosphate 76.3 5 0.00017 36.4 6.5 89 104-228 147-236 (259)
219 3kru_A NADH:flavin oxidoreduct 76.1 6.5 0.00022 36.8 7.5 21 183-204 228-248 (343)
220 2e6f_A Dihydroorotate dehydrog 76.1 5.5 0.00019 35.9 6.7 78 102-207 107-197 (314)
221 3vni_A Xylose isomerase domain 75.8 11 0.00036 32.6 8.3 109 42-150 18-152 (294)
222 2yx0_A Radical SAM enzyme; pre 75.7 23 0.00079 32.0 10.9 85 54-152 142-245 (342)
223 1eep_A Inosine 5'-monophosphat 75.6 8.3 0.00028 36.3 8.1 66 103-204 154-221 (404)
224 2z1k_A (NEO)pullulanase; hydro 75.6 2.8 9.6E-05 39.8 4.9 46 107-152 56-119 (475)
225 1thf_D HISF protein; thermophI 75.5 12 0.00042 32.1 8.6 94 102-233 31-125 (253)
226 3ayv_A Putative uncharacterize 75.5 17 0.00058 30.8 9.4 139 102-260 11-163 (254)
227 2ekc_A AQ_1548, tryptophan syn 75.4 11 0.00036 33.6 8.4 17 189-206 219-235 (262)
228 3tdn_A FLR symmetric alpha-bet 75.3 3.5 0.00012 35.8 5.1 95 102-234 36-131 (247)
229 3tr2_A Orotidine 5'-phosphate 75.2 3.5 0.00012 36.8 5.1 92 39-142 19-111 (239)
230 3eeg_A 2-isopropylmalate synth 74.9 15 0.0005 34.1 9.4 94 103-227 83-188 (325)
231 1xim_A D-xylose isomerase; iso 74.7 3.5 0.00012 38.5 5.2 50 99-148 31-87 (393)
232 1geq_A Tryptophan synthase alp 74.4 30 0.001 29.6 10.8 69 73-148 69-138 (248)
233 3tsm_A IGPS, indole-3-glycerol 74.4 15 0.00051 33.5 9.2 34 189-225 233-266 (272)
234 2qr6_A IMP dehydrogenase/GMP r 74.3 15 0.00052 34.3 9.5 19 189-208 223-241 (393)
235 1jcn_A Inosine monophosphate d 74.0 9.8 0.00034 36.9 8.4 67 102-204 255-323 (514)
236 1o66_A 3-methyl-2-oxobutanoate 73.8 12 0.00042 34.4 8.5 137 110-269 33-218 (275)
237 1hg3_A Triosephosphate isomera 73.7 37 0.0013 30.0 11.4 115 107-256 81-203 (225)
238 1wa3_A 2-keto-3-deoxy-6-phosph 73.7 8.7 0.0003 32.1 7.0 126 39-229 20-149 (205)
239 3vav_A 3-methyl-2-oxobutanoate 73.6 13 0.00045 34.2 8.6 117 110-251 45-208 (275)
240 1tv5_A Dhodehase, dihydroorota 73.2 19 0.00064 35.1 10.1 27 183-209 309-335 (443)
241 1bxb_A Xylose isomerase; xylos 73.1 3.9 0.00013 38.0 5.1 48 101-148 33-87 (387)
242 1j0h_A Neopullulanase; beta-al 73.1 3.4 0.00011 40.8 4.9 46 107-152 182-245 (588)
243 3gdb_A Endo-D, putative unchar 72.9 3.9 0.00013 43.6 5.5 66 49-121 237-323 (937)
244 4aie_A Glucan 1,6-alpha-glucos 72.9 3.8 0.00013 39.0 5.0 46 107-152 38-102 (549)
245 1lwj_A 4-alpha-glucanotransfer 72.8 4.5 0.00016 38.1 5.5 129 107-239 29-219 (441)
246 2dh2_A 4F2 cell-surface antige 72.8 3.5 0.00012 39.1 4.8 133 105-255 40-191 (424)
247 1ur4_A Galactanase; hydrolase, 72.8 19 0.00065 34.5 9.9 50 104-155 51-114 (399)
248 1vzw_A Phosphoribosyl isomeras 72.7 8.6 0.00029 33.0 6.9 87 102-229 33-122 (244)
249 2xio_A Putative deoxyribonucle 72.4 52 0.0018 29.2 12.7 167 22-240 37-221 (301)
250 1vc4_A Indole-3-glycerol phosp 72.4 6 0.00021 35.4 6.0 82 107-228 121-202 (254)
251 1gcy_A Glucan 1,4-alpha-maltot 72.4 5.6 0.00019 38.7 6.2 126 106-238 42-221 (527)
252 1vs1_A 3-deoxy-7-phosphoheptul 72.3 15 0.00053 33.4 8.8 139 50-228 118-270 (276)
253 3ldv_A Orotidine 5'-phosphate 72.0 3.3 0.00011 37.6 4.1 91 39-141 38-129 (255)
254 3ks6_A Glycerophosphoryl diest 72.0 8.8 0.0003 33.6 6.9 123 41-205 86-232 (250)
255 3dxi_A Putative aldolase; TIM 71.9 15 0.00053 34.0 8.8 150 41-227 88-240 (320)
256 3d3a_A Beta-galactosidase; pro 71.9 3.8 0.00013 41.6 5.0 52 100-151 36-97 (612)
257 2qjg_A Putative aldolase MJ040 71.7 10 0.00035 33.2 7.3 94 105-229 103-202 (273)
258 2w91_A Endo-beta-N-acetylgluco 71.5 4.6 0.00016 41.3 5.5 85 52-142 89-193 (653)
259 3o1n_A 3-dehydroquinate dehydr 71.4 21 0.00073 32.3 9.5 104 69-204 82-195 (276)
260 2pcq_A Putative dihydrodipicol 71.3 8 0.00027 34.9 6.6 138 102-275 20-191 (283)
261 1g94_A Alpha-amylase; beta-alp 71.3 4.7 0.00016 38.2 5.2 51 102-152 16-87 (448)
262 2yyu_A Orotidine 5'-phosphate 71.3 3.2 0.00011 36.7 3.8 95 39-145 15-113 (246)
263 4avf_A Inosine-5'-monophosphat 71.1 29 0.001 33.7 11.0 55 54-121 242-298 (490)
264 2gou_A Oxidoreductase, FMN-bin 71.0 27 0.00092 32.6 10.4 25 183-207 248-272 (365)
265 3dhu_A Alpha-amylase; structur 70.9 4.6 0.00016 38.1 5.1 130 107-245 36-210 (449)
266 2hk0_A D-psicose 3-epimerase; 70.9 13 0.00044 32.6 7.8 108 42-150 38-171 (309)
267 2yb1_A Amidohydrolase; HET: AM 70.9 3.9 0.00013 36.9 4.4 69 71-146 172-243 (292)
268 2wc7_A Alpha amylase, catalyti 70.7 4.2 0.00015 38.8 4.8 46 107-152 62-125 (488)
269 1ht6_A AMY1, alpha-amylase iso 70.6 4.6 0.00016 37.8 4.9 46 107-152 27-91 (405)
270 3apt_A Methylenetetrahydrofola 70.5 38 0.0013 31.1 11.1 138 39-204 27-179 (310)
271 3hbl_A Pyruvate carboxylase; T 70.4 22 0.00077 38.5 10.8 164 32-230 619-792 (1150)
272 3zwt_A Dihydroorotate dehydrog 70.3 19 0.00066 33.9 9.2 82 102-207 162-256 (367)
273 3qc0_A Sugar isomerase; TIM ba 70.2 6.7 0.00023 33.3 5.6 105 42-149 19-142 (275)
274 1dbt_A Orotidine 5'-phosphate 70.0 2.5 8.5E-05 37.2 2.8 95 39-145 14-112 (239)
275 2zds_A Putative DNA-binding pr 70.0 37 0.0013 29.7 10.6 107 42-150 19-180 (340)
276 3l5a_A NADH/flavin oxidoreduct 70.0 11 0.00036 36.3 7.5 26 183-208 262-288 (419)
277 4aio_A Limit dextrinase; hydro 69.8 3.3 0.00011 42.0 4.1 23 130-152 379-401 (884)
278 1xla_A D-xylose isomerase; iso 69.7 3.5 0.00012 38.5 3.9 47 102-148 34-87 (394)
279 1mzh_A Deoxyribose-phosphate a 69.7 8.2 0.00028 33.6 6.1 146 39-229 18-173 (225)
280 3i65_A Dihydroorotate dehydrog 69.6 26 0.00087 33.9 10.1 84 102-209 197-307 (415)
281 3aam_A Endonuclease IV, endoiv 69.6 7.8 0.00027 33.2 5.9 106 42-150 15-140 (270)
282 3khj_A Inosine-5-monophosphate 69.2 15 0.0005 34.6 8.1 93 67-204 78-172 (361)
283 2guy_A Alpha-amylase A; (beta- 68.7 5.4 0.00019 37.9 5.1 47 106-152 48-120 (478)
284 2h6r_A Triosephosphate isomera 68.6 20 0.00067 31.0 8.3 97 69-213 97-206 (219)
285 1ps9_A 2,4-dienoyl-COA reducta 68.6 9.1 0.00031 38.1 6.9 22 183-204 226-247 (671)
286 2v82_A 2-dehydro-3-deoxy-6-pho 68.5 35 0.0012 28.5 9.7 72 54-148 33-106 (212)
287 1hvx_A Alpha-amylase; hydrolas 68.5 6.9 0.00023 37.9 5.8 46 105-150 28-102 (515)
288 1wzl_A Alpha-amylase II; pullu 68.5 4.6 0.00016 39.9 4.6 45 107-151 179-241 (585)
289 3pm6_A Putative fructose-bisph 68.4 25 0.00086 32.8 9.4 172 39-229 36-219 (306)
290 3bh4_A Alpha-amylase; calcium, 68.4 7.2 0.00025 37.2 5.9 47 104-150 24-99 (483)
291 4ab4_A Xenobiotic reductase B; 68.3 13 0.00045 35.0 7.6 85 103-232 244-329 (362)
292 3tqv_A Nicotinate-nucleotide p 68.0 12 0.00041 34.6 7.1 114 74-238 126-248 (287)
293 1ud2_A Amylase, alpha-amylase; 68.0 7.4 0.00025 37.0 5.9 46 105-150 27-101 (480)
294 1wpc_A Glucan 1,4-alpha-maltoh 68.0 7.4 0.00025 37.1 5.9 46 105-150 29-103 (485)
295 3gka_A N-ethylmaleimide reduct 67.9 13 0.00045 35.0 7.5 84 103-231 252-336 (361)
296 3ffs_A Inosine-5-monophosphate 67.6 14 0.00048 35.5 7.8 65 104-204 146-211 (400)
297 3tr2_A Orotidine 5'-phosphate 67.5 19 0.00065 32.0 8.1 161 25-227 59-235 (239)
298 2y88_A Phosphoribosyl isomeras 67.5 12 0.00042 31.9 6.7 92 102-234 32-125 (244)
299 3ngf_A AP endonuclease, family 67.5 19 0.00065 30.9 8.0 100 42-149 24-150 (269)
300 3iix_A Biotin synthetase, puta 67.5 10 0.00035 34.1 6.5 137 67-232 84-224 (348)
301 1m3u_A 3-methyl-2-oxobutanoate 67.4 15 0.00052 33.5 7.5 135 110-269 33-218 (264)
302 2qul_A D-tagatose 3-epimerase; 67.0 6.3 0.00022 33.9 4.8 108 43-150 19-153 (290)
303 1ea9_C Cyclomaltodextrinase; h 66.8 5.5 0.00019 39.3 4.8 45 107-151 178-240 (583)
304 1muw_A Xylose isomerase; atomi 66.8 4.3 0.00015 37.7 3.9 47 102-148 34-87 (386)
305 2fty_A Dihydropyrimidinase; al 66.8 46 0.0016 32.5 11.4 104 42-152 152-280 (559)
306 3l23_A Sugar phosphate isomera 66.7 26 0.00089 31.0 8.9 103 43-149 31-165 (303)
307 1jvn_A Glutamine, bifunctional 66.6 5.9 0.0002 39.3 5.0 116 103-239 282-408 (555)
308 1qop_A Tryptophan synthase alp 66.4 18 0.00062 32.1 7.8 23 189-212 218-240 (268)
309 3vup_A Beta-1,4-mannanase; TIM 66.3 6.9 0.00024 33.3 4.8 51 102-152 43-112 (351)
310 3glc_A Aldolase LSRF; TIM barr 66.2 11 0.00037 34.8 6.4 130 42-213 130-264 (295)
311 1vyr_A Pentaerythritol tetrani 66.2 33 0.0011 32.1 9.8 46 183-229 249-294 (364)
312 2aaa_A Alpha-amylase; glycosid 65.9 6.6 0.00023 37.4 5.1 47 107-153 49-121 (484)
313 1geq_A Tryptophan synthase alp 65.9 53 0.0018 28.0 10.5 22 189-211 204-225 (248)
314 3aal_A Probable endonuclease 4 65.7 16 0.00055 32.0 7.2 100 42-141 19-136 (303)
315 1p1x_A Deoxyribose-phosphate a 65.6 36 0.0012 30.8 9.7 108 41-154 89-203 (260)
316 3eww_A Ompdecase, orotidine-5' 65.5 8.1 0.00028 35.0 5.3 49 39-87 42-90 (260)
317 1oy0_A Ketopantoate hydroxymet 65.3 17 0.00058 33.5 7.5 136 111-269 51-236 (281)
318 3ff4_A Uncharacterized protein 65.2 4.4 0.00015 32.5 3.1 42 100-147 68-109 (122)
319 2e8y_A AMYX protein, pullulana 65.1 4.7 0.00016 41.0 4.1 48 105-152 255-338 (718)
320 3ldv_A Orotidine 5'-phosphate 65.0 6.3 0.00021 35.7 4.5 126 65-226 113-252 (255)
321 1h5y_A HISF; histidine biosynt 64.8 24 0.00081 29.6 7.9 74 39-121 88-174 (253)
322 4fxs_A Inosine-5'-monophosphat 64.6 33 0.0011 33.4 9.9 117 41-206 234-364 (496)
323 3qvq_A Phosphodiesterase OLEI0 64.5 15 0.00051 32.1 6.7 121 41-205 98-238 (252)
324 2dsk_A Chitinase; catalytic do 64.4 6.9 0.00024 36.4 4.8 75 67-142 58-138 (311)
325 4ef8_A Dihydroorotate dehydrog 64.3 88 0.003 29.3 12.4 127 38-204 136-305 (354)
326 3gbc_A Pyrazinamidase/nicotina 64.0 4.8 0.00016 34.0 3.3 65 76-147 117-183 (186)
327 1zja_A Trehalulose synthase; s 63.9 7.3 0.00025 38.1 5.0 48 105-152 36-102 (557)
328 3dx5_A Uncharacterized protein 63.6 17 0.00057 31.2 6.8 78 69-150 47-143 (286)
329 1rd5_A Tryptophan synthase alp 63.6 26 0.0009 30.6 8.2 19 189-207 214-232 (262)
330 2q02_A Putative cytoplasmic pr 63.6 44 0.0015 28.1 9.5 93 54-150 33-140 (272)
331 2whl_A Beta-mannanase, baman5; 63.6 10 0.00035 33.4 5.6 50 103-152 33-86 (294)
332 3aie_A Glucosyltransferase-SI; 63.6 7.5 0.00026 40.9 5.3 50 103-152 635-715 (844)
333 3vzx_A Heptaprenylglyceryl pho 63.5 13 0.00046 33.1 6.3 81 101-226 140-223 (228)
334 1zco_A 2-dehydro-3-deoxyphosph 63.4 16 0.00054 32.9 6.8 40 189-228 211-255 (262)
335 1rpx_A Protein (ribulose-phosp 63.3 12 0.00041 32.0 5.8 39 102-142 24-66 (230)
336 1w0m_A TIM, triosephosphate is 63.3 26 0.00089 31.0 8.1 114 107-256 78-200 (226)
337 3l0g_A Nicotinate-nucleotide p 63.2 21 0.00071 33.3 7.7 41 188-238 217-257 (300)
338 1eix_A Orotidine 5'-monophosph 63.2 1.8 6.1E-05 38.3 0.5 95 39-144 25-119 (245)
339 3l5a_A NADH/flavin oxidoreduct 63.1 5.2 0.00018 38.5 3.7 24 102-125 265-289 (419)
340 3bdk_A D-mannonate dehydratase 63.1 8.5 0.00029 36.7 5.2 44 104-147 33-81 (386)
341 2r14_A Morphinone reductase; H 63.1 32 0.0011 32.4 9.1 25 183-207 253-277 (377)
342 4aef_A Neopullulanase (alpha-a 62.9 7.4 0.00025 38.8 5.0 47 106-152 244-308 (645)
343 1n7k_A Deoxyribose-phosphate a 62.8 9.8 0.00034 34.0 5.3 81 41-126 92-173 (234)
344 1ypf_A GMP reductase; GUAC, pu 62.8 80 0.0027 28.9 11.7 92 69-205 80-177 (336)
345 1dos_A Aldolase class II; lyas 62.6 45 0.0015 31.7 10.1 170 39-226 38-246 (358)
346 1uuq_A Mannosyl-oligosaccharid 62.5 11 0.00038 35.5 5.9 50 101-151 62-132 (440)
347 2agk_A 1-(5-phosphoribosyl)-5- 62.3 7.1 0.00024 35.0 4.3 47 190-238 89-135 (260)
348 3oa3_A Aldolase; structural ge 62.3 12 0.00042 34.6 6.0 106 101-238 74-183 (288)
349 3exr_A RMPD (hexulose-6-phosph 62.1 51 0.0017 28.5 9.7 92 39-143 16-108 (221)
350 3tfx_A Orotidine 5'-phosphate 62.1 10 0.00035 34.3 5.4 91 39-141 15-107 (259)
351 3g3d_A UMP synthase, uridine 5 62.0 9.9 0.00034 35.5 5.3 49 39-87 94-142 (312)
352 3civ_A Endo-beta-1,4-mannanase 62.0 14 0.00049 34.3 6.5 50 104-153 56-120 (343)
353 3ru6_A Orotidine 5'-phosphate 61.9 16 0.00053 34.0 6.6 141 39-206 35-179 (303)
354 1vyr_A Pentaerythritol tetrani 61.9 20 0.00067 33.6 7.4 90 103-231 253-343 (364)
355 3nvt_A 3-deoxy-D-arabino-heptu 61.9 29 0.001 33.1 8.7 41 188-228 329-374 (385)
356 1x7f_A Outer surface protein; 61.6 6.3 0.00021 38.0 4.0 147 79-262 26-208 (385)
357 2fli_A Ribulose-phosphate 3-ep 61.5 10 0.00036 31.8 5.0 42 101-142 16-59 (220)
358 1ps9_A 2,4-dienoyl-COA reducta 61.4 5.5 0.00019 39.7 3.7 39 103-141 230-277 (671)
359 2bhu_A Maltooligosyltrehalose 61.3 8.9 0.0003 38.2 5.2 129 105-239 148-310 (602)
360 4aee_A Alpha amylase, catalyti 61.2 8.3 0.00028 39.0 5.0 46 107-152 271-334 (696)
361 2gou_A Oxidoreductase, FMN-bin 61.2 18 0.00063 33.8 7.1 90 103-231 252-342 (365)
362 3ndo_A Deoxyribose-phosphate a 61.1 18 0.00063 32.2 6.7 124 41-203 84-217 (231)
363 2hjp_A Phosphonopyruvate hydro 61.1 17 0.00058 33.4 6.7 134 111-270 32-224 (290)
364 3txv_A Probable tagatose 6-pho 61.1 56 0.0019 32.1 10.6 119 66-209 2-135 (450)
365 2zic_A Dextran glucosidase; TI 61.0 8.1 0.00028 37.7 4.8 47 106-152 36-101 (543)
366 1p0k_A Isopentenyl-diphosphate 60.8 23 0.00078 32.4 7.6 18 105-122 193-210 (349)
367 1m53_A Isomaltulose synthase; 60.8 8.9 0.0003 37.6 5.0 47 106-152 50-115 (570)
368 3o0f_A Putative metal-dependen 60.5 11 0.00038 34.7 5.4 69 71-146 184-256 (301)
369 3nco_A Endoglucanase fncel5A; 60.4 14 0.00046 33.0 5.8 49 103-151 43-103 (320)
370 2c6q_A GMP reductase 2; TIM ba 60.4 30 0.001 32.2 8.4 94 71-207 147-254 (351)
371 1qo2_A Molecule: N-((5-phospho 60.4 8 0.00027 33.3 4.2 22 102-123 31-52 (241)
372 1vrd_A Inosine-5'-monophosphat 60.1 35 0.0012 32.7 9.0 67 102-204 237-305 (494)
373 1icp_A OPR1, 12-oxophytodienoa 60.0 30 0.001 32.5 8.3 87 103-207 169-278 (376)
374 3cny_A Inositol catabolism pro 60.0 55 0.0019 28.0 9.5 101 42-150 35-161 (301)
375 1jae_A Alpha-amylase; glycosid 59.7 5.1 0.00017 38.3 3.0 51 102-152 24-97 (471)
376 1ua7_A Alpha-amylase; beta-alp 59.6 8.6 0.00029 36.1 4.5 114 85-207 10-175 (422)
377 1yad_A Regulatory protein TENI 59.6 28 0.00097 29.3 7.5 70 40-124 29-98 (221)
378 2y7e_A 3-keto-5-aminohexanoate 59.5 7.3 0.00025 35.9 3.9 46 183-229 32-77 (282)
379 1i60_A IOLI protein; beta barr 59.5 20 0.0007 30.2 6.6 54 71-124 47-107 (278)
380 1zco_A 2-dehydro-3-deoxyphosph 59.4 34 0.0011 30.7 8.3 108 24-141 129-257 (262)
381 1qho_A Alpha-amylase; glycosid 59.3 8.3 0.00028 38.8 4.6 44 107-150 58-128 (686)
382 3gdm_A Orotidine 5'-phosphate 59.3 11 0.00037 34.3 5.0 49 39-87 40-89 (267)
383 1mxg_A Alpha amylase; hyperthe 59.0 13 0.00043 35.2 5.6 46 107-152 34-109 (435)
384 2ze3_A DFA0005; organic waste 58.7 18 0.0006 33.0 6.3 132 112-270 34-222 (275)
385 2rdx_A Mandelate racemase/muco 58.7 63 0.0021 29.8 10.2 32 107-141 153-184 (379)
386 2fiq_A Putative tagatose 6-pho 58.4 40 0.0014 32.7 9.1 157 68-238 61-257 (420)
387 1m7x_A 1,4-alpha-glucan branch 58.2 14 0.00049 36.7 6.1 103 104-207 159-296 (617)
388 1vr6_A Phospho-2-dehydro-3-deo 58.2 20 0.00068 33.9 6.8 41 188-228 293-338 (350)
389 3sfw_A Dihydropyrimidinase; hy 58.2 64 0.0022 30.0 10.3 96 52-152 144-265 (461)
390 3edf_A FSPCMD, cyclomaltodextr 58.1 12 0.0004 37.1 5.4 48 105-152 152-221 (601)
391 2w6r_A Imidazole glycerol phos 58.0 11 0.00037 32.7 4.7 40 102-141 31-71 (266)
392 1vhn_A Putative flavin oxidore 57.9 19 0.00065 32.7 6.4 110 100-238 70-215 (318)
393 3nav_A Tryptophan synthase alp 57.8 43 0.0015 30.3 8.7 19 189-207 221-239 (271)
394 4ab4_A Xenobiotic reductase B; 57.8 57 0.0019 30.6 9.9 87 103-207 152-264 (362)
395 1zlp_A PSR132, petal death pro 57.7 18 0.00061 33.8 6.3 135 111-270 56-247 (318)
396 3a24_A Alpha-galactosidase; gl 57.7 10 0.00035 38.8 5.0 46 101-146 309-363 (641)
397 3khj_A Inosine-5-monophosphate 57.7 92 0.0032 29.1 11.3 18 189-206 220-237 (361)
398 1qnr_A Endo-1,4-B-D-mannanase; 57.7 9.6 0.00033 33.8 4.3 52 101-152 36-112 (344)
399 1s2w_A Phosphoenolpyruvate pho 57.5 22 0.00076 32.6 6.8 121 111-257 36-213 (295)
400 4awe_A Endo-beta-D-1,4-mannana 57.4 8.4 0.00029 33.0 3.8 51 100-152 36-123 (387)
401 2f6u_A GGGPS, (S)-3-O-geranylg 57.2 8.9 0.00031 34.2 4.0 67 100-206 148-219 (234)
402 3n3m_A Orotidine 5'-phosphate 57.0 8.7 0.0003 36.4 4.0 73 44-121 107-184 (342)
403 3obe_A Sugar phosphate isomera 56.9 56 0.0019 28.9 9.3 104 42-149 37-169 (305)
404 3c8f_A Pyruvate formate-lyase 56.8 6.5 0.00022 32.8 2.9 105 33-144 78-192 (245)
405 3gka_A N-ethylmaleimide reduct 56.7 37 0.0013 31.9 8.4 87 103-207 160-272 (361)
406 2hsa_B 12-oxophytodienoate red 56.7 39 0.0014 32.1 8.6 120 71-231 223-368 (402)
407 1sfl_A 3-dehydroquinate dehydr 56.6 58 0.002 28.6 9.2 107 68-204 45-161 (238)
408 1uok_A Oligo-1,6-glucosidase; 56.6 11 0.00038 36.8 4.9 46 107-152 37-101 (558)
409 3b8i_A PA4872 oxaloacetate dec 56.6 21 0.00071 32.8 6.4 118 111-255 38-208 (287)
410 2otd_A Glycerophosphodiester p 56.4 23 0.00079 30.6 6.5 120 42-206 96-236 (247)
411 4gj1_A 1-(5-phosphoribosyl)-5- 56.4 17 0.00058 32.0 5.7 41 188-234 87-127 (243)
412 1thf_D HISF protein; thermophI 56.3 52 0.0018 28.0 8.7 139 25-212 74-230 (253)
413 1qtw_A Endonuclease IV; DNA re 56.0 92 0.0032 26.3 10.4 59 68-126 45-114 (285)
414 3fs2_A 2-dehydro-3-deoxyphosph 56.0 31 0.0011 32.0 7.5 148 49-228 127-288 (298)
415 1bqc_A Protein (beta-mannanase 56.0 13 0.00044 32.9 4.8 47 105-151 36-86 (302)
416 4fo4_A Inosine 5'-monophosphat 55.9 1E+02 0.0036 28.9 11.4 19 189-207 224-242 (366)
417 1wza_A Alpha-amylase A; hydrol 55.8 10 0.00035 36.1 4.4 56 184-239 176-236 (488)
418 3fst_A 5,10-methylenetetrahydr 55.8 96 0.0033 28.4 10.8 133 47-206 45-184 (304)
419 3dc8_A Dihydropyrimidinase; TI 55.7 58 0.002 31.1 9.7 95 54-153 143-263 (490)
420 1gkr_A Hydantoinase, non-ATP d 55.7 1.2E+02 0.0041 27.5 11.8 92 54-150 143-263 (458)
421 3ih1_A Methylisocitrate lyase; 55.7 27 0.00092 32.4 7.1 134 111-270 46-233 (305)
422 2hsa_B 12-oxophytodienoate red 55.6 44 0.0015 31.7 8.8 88 102-207 172-288 (402)
423 3v8e_A Nicotinamidase; hydrola 55.6 6.2 0.00021 34.2 2.6 64 78-148 148-215 (216)
424 1im5_A 180AA long hypothetical 55.5 8.4 0.00029 31.9 3.3 65 77-148 113-179 (180)
425 1eix_A Orotidine 5'-monophosph 55.3 35 0.0012 29.9 7.5 17 191-207 85-101 (245)
426 4e8d_A Glycosyl hydrolase, fam 55.3 15 0.00051 37.3 5.6 53 100-152 31-93 (595)
427 3czg_A Sucrose hydrolase; (alp 55.2 15 0.00052 36.8 5.7 50 103-152 108-178 (644)
428 1gte_A Dihydropyrimidine dehyd 55.0 24 0.00083 37.3 7.5 73 102-204 649-734 (1025)
429 3ngj_A Deoxyribose-phosphate a 54.9 17 0.00058 32.7 5.4 104 102-238 44-152 (239)
430 2yr1_A 3-dehydroquinate dehydr 54.8 60 0.0021 28.9 9.1 104 68-204 61-175 (257)
431 1eep_A Inosine 5'-monophosphat 54.7 71 0.0024 29.8 10.0 55 54-121 166-222 (404)
432 3jr2_A Hexulose-6-phosphate sy 54.6 30 0.001 29.4 6.8 96 69-213 95-201 (218)
433 1g5a_A Amylosucrase; glycosylt 54.5 12 0.00041 37.5 4.9 50 103-152 115-185 (628)
434 2wan_A Pullulanase; hydrolase, 54.5 12 0.00041 39.5 5.0 48 105-152 473-554 (921)
435 3aj7_A Oligo-1,6-glucosidase; 54.5 13 0.00044 36.8 5.0 46 107-152 46-110 (589)
436 1l6s_A Porphobilinogen synthas 54.5 34 0.0012 32.2 7.6 83 101-202 58-161 (323)
437 3ajx_A 3-hexulose-6-phosphate 54.4 13 0.00045 30.9 4.4 37 103-142 12-50 (207)
438 3lab_A Putative KDPG (2-keto-3 54.0 6.7 0.00023 34.9 2.6 102 71-226 94-209 (217)
439 3hv8_A Protein FIMX; EAL phosp 53.8 31 0.0011 29.8 6.9 89 63-152 113-230 (268)
440 2c0h_A Mannan endo-1,4-beta-ma 53.7 9.8 0.00033 33.9 3.7 49 102-150 46-111 (353)
441 4axn_A Chitinase C1; hydrolase 53.6 15 0.00051 33.4 4.9 52 69-121 82-139 (328)
442 1gjw_A Maltodextrin glycosyltr 53.4 14 0.00047 36.9 5.1 49 103-151 122-203 (637)
443 1d3c_A Cyclodextrin glycosyltr 53.3 12 0.00041 37.6 4.6 47 104-150 58-136 (686)
444 3bc9_A AMYB, alpha amylase, ca 53.0 17 0.00057 36.3 5.6 48 103-150 152-229 (599)
445 2nv1_A Pyridoxal biosynthesis 52.9 9.8 0.00033 34.4 3.6 77 40-131 31-114 (305)
446 3elf_A Fructose-bisphosphate a 52.7 53 0.0018 31.1 8.7 140 73-228 77-234 (349)
447 2ze0_A Alpha-glucosidase; TIM 52.6 15 0.0005 35.9 5.0 48 105-152 35-101 (555)
448 1tz9_A Mannonate dehydratase; 52.5 16 0.00056 33.4 5.1 45 103-147 23-72 (367)
449 3gk0_A PNP synthase, pyridoxin 52.4 16 0.00055 33.8 4.9 51 65-125 137-187 (278)
450 2r8c_A Putative amidohydrolase 52.4 1E+02 0.0034 27.9 10.4 103 24-150 100-277 (426)
451 3ffs_A Inosine-5-monophosphate 52.3 86 0.0029 30.0 10.2 66 40-121 146-212 (400)
452 1rh9_A Endo-beta-mannanase; en 52.3 23 0.00078 32.0 6.0 52 100-151 41-106 (373)
453 2pz0_A Glycerophosphoryl diest 52.2 30 0.001 30.1 6.5 119 42-205 101-239 (252)
454 1vhc_A Putative KHG/KDPG aldol 52.0 52 0.0018 28.7 8.1 124 40-228 28-155 (224)
455 1ub3_A Aldolase protein; schif 51.9 29 0.00098 30.5 6.3 101 41-154 75-181 (220)
456 1edg_A Endoglucanase A; family 51.9 19 0.00065 33.1 5.4 60 92-152 53-123 (380)
457 3aty_A Tcoye, prostaglandin F2 51.8 49 0.0017 31.2 8.4 26 183-208 264-289 (379)
458 1xg4_A Probable methylisocitra 51.7 25 0.00085 32.3 6.1 135 111-270 34-225 (295)
459 1yht_A DSPB; beta barrel, hydr 51.3 22 0.00076 33.3 5.9 74 66-152 29-117 (367)
460 4dbe_A Orotidine 5'-phosphate 51.3 16 0.00055 32.0 4.6 21 193-214 175-195 (222)
461 2g0w_A LMO2234 protein; putati 51.1 44 0.0015 29.1 7.5 19 102-120 106-124 (296)
462 3qw3_A Orotidine-5-phosphate d 51.0 6.2 0.00021 35.6 1.9 91 26-122 16-112 (255)
463 3aty_A Tcoye, prostaglandin F2 50.9 31 0.001 32.6 6.8 115 71-231 229-356 (379)
464 3tdn_A FLR symmetric alpha-bet 50.9 14 0.00047 32.0 4.1 88 24-123 78-178 (247)
465 2qw5_A Xylose isomerase-like T 50.9 43 0.0015 29.7 7.5 76 45-121 35-128 (335)
466 2yv2_A Succinyl-COA synthetase 50.8 21 0.0007 32.5 5.4 52 100-154 81-135 (297)
467 3aml_A OS06G0726400 protein; s 50.8 17 0.00058 37.5 5.3 102 106-207 207-346 (755)
468 1ji1_A Alpha-amylase I; beta/a 50.7 14 0.00048 36.8 4.6 46 107-152 197-265 (637)
469 1cyg_A Cyclodextrin glucanotra 50.7 10 0.00036 38.0 3.7 48 103-150 54-132 (680)
470 3eoo_A Methylisocitrate lyase; 50.6 41 0.0014 31.0 7.4 134 111-270 39-229 (298)
471 3icg_A Endoglucanase D; cellul 50.5 11 0.00039 36.4 3.8 55 98-152 42-108 (515)
472 3k13_A 5-methyltetrahydrofolat 50.3 63 0.0022 29.7 8.7 100 43-145 43-171 (300)
473 3c6c_A 3-keto-5-aminohexanoate 50.3 15 0.00052 34.4 4.5 47 183-229 46-92 (316)
474 3thd_A Beta-galactosidase; TIM 50.3 19 0.00066 36.9 5.6 52 100-151 39-100 (654)
475 1yix_A Deoxyribonuclease YCFH; 50.2 1.1E+02 0.0039 25.6 11.7 165 23-240 31-207 (265)
476 3vgf_A Malto-oligosyltrehalose 50.2 18 0.00061 35.6 5.2 130 105-238 123-285 (558)
477 3hm7_A Allantoinase; metallo-d 50.2 1.3E+02 0.0045 27.5 10.9 81 67-152 166-270 (448)
478 3cz8_A Putative sporulation-sp 50.1 30 0.001 31.2 6.4 64 74-140 57-135 (319)
479 3m47_A Orotidine 5'-phosphate 50.1 31 0.0011 30.1 6.3 53 220-273 141-196 (228)
480 3r2j_A Alpha/beta-hydrolase-li 49.9 8.4 0.00029 33.8 2.6 64 78-148 151-216 (227)
481 3oa3_A Aldolase; structural ge 49.9 44 0.0015 30.9 7.5 126 41-204 130-262 (288)
482 2r14_A Morphinone reductase; H 49.8 30 0.001 32.6 6.5 90 103-231 257-348 (377)
483 1r30_A Biotin synthase; SAM ra 49.7 34 0.0012 31.3 6.8 140 67-235 99-244 (369)
484 3bmv_A Cyclomaltodextrin gluca 49.6 15 0.00051 36.9 4.6 48 103-150 57-137 (683)
485 3ttq_A Dextransucrase; (beta/a 49.6 16 0.00055 39.7 5.0 50 103-152 855-935 (1108)
486 2z2u_A UPF0026 protein MJ0257; 49.4 96 0.0033 27.2 9.5 80 55-152 129-224 (311)
487 3jug_A Beta-mannanase; TIM-bar 49.4 26 0.0009 32.5 6.0 16 102-117 88-103 (345)
488 3ctl_A D-allulose-6-phosphate 49.4 40 0.0014 29.6 6.9 37 101-142 13-55 (231)
489 2o55_A Putative glycerophospho 49.2 32 0.0011 29.8 6.3 125 42-205 94-244 (258)
490 2ob3_A Parathion hydrolase; me 49.2 1.5E+02 0.0051 26.7 11.7 52 188-240 203-269 (330)
491 2vr5_A Glycogen operon protein 49.2 19 0.00066 36.7 5.4 119 106-225 207-386 (718)
492 2yv1_A Succinyl-COA ligase [AD 49.1 17 0.00058 33.0 4.6 52 100-154 80-134 (294)
493 3pzg_A Mannan endo-1,4-beta-ma 49.0 22 0.00076 33.7 5.5 52 101-152 43-122 (383)
494 3o6c_A PNP synthase, pyridoxin 48.9 16 0.00053 33.6 4.2 46 68-123 109-154 (260)
495 3sr7_A Isopentenyl-diphosphate 48.9 22 0.00075 33.6 5.4 112 66-207 99-239 (365)
496 3aof_A Endoglucanase; glycosyl 48.8 23 0.00078 31.2 5.2 18 104-121 36-53 (317)
497 2tps_A Protein (thiamin phosph 48.8 59 0.002 27.1 7.7 36 72-122 67-102 (227)
498 3lot_A Uncharacterized protein 48.7 17 0.00057 34.0 4.5 77 183-260 30-121 (314)
499 3bw2_A 2-nitropropane dioxygen 48.7 1.6E+02 0.0055 26.9 11.4 51 54-122 123-173 (369)
500 1tg7_A Beta-galactosidase; TIM 48.7 14 0.00049 39.4 4.5 51 101-151 36-96 (971)
No 1
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=100.00 E-value=4.1e-93 Score=652.68 Aligned_cols=234 Identities=22% Similarity=0.396 Sum_probs=223.9
Q ss_pred CCCCCCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCC-cHHHHHHH
Q 022982 19 EKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIR 97 (289)
Q Consensus 19 ~KPR~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~ 97 (289)
+|||++|+|||+|||+ |+++++|+|++||+|||++|||||||+|||++.|++||++||+|||+|||| ||||+|++
T Consensus 8 ~KPR~~GlT~v~dkgl----g~~~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~ 83 (251)
T 1qwg_A 8 YEDFQRGLTVVLDKGL----PPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYS 83 (251)
T ss_dssp CCCCCCCCEEEEESSC----CHHHHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHH
T ss_pred CCCcccCeeEEecCCC----CHHHHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHH
Confidence 9999999999999998 888999999999999999999999999999999999999999999999997 59999999
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
|| ++++|+++||++||++|||||||++||+++|+++|++++++||+|+||+|+|++. .+.
T Consensus 84 qg--~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~------~~~------------ 143 (251)
T 1qwg_A 84 KG--KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPD------KDK------------ 143 (251)
T ss_dssp TT--CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHH------HHT------------
T ss_pred cC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCc------ccC------------
Confidence 99 9999999999999999999999999999999999999999999999999999852 111
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEecc------ccccCCCCccHHHHHHHHhccCCCceEEecCCchhHHHHHHHhC
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSD------DVCKHADSLRADIIAKVIGRLGLEKTMFEATNPRTSEWFIRRYG 251 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEar------GI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k~qQ~~~I~~fG 251 (289)
..|++++|+++++||+|||++|||||| ||||++|+||+|++++|++++|++|||||||+|+||+|||++||
T Consensus 144 ---~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l~~eklifEAp~k~qq~~fI~~fG 220 (251)
T 1qwg_A 144 ---QLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFG 220 (251)
T ss_dssp ---TCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEEECCSHHHHHHHHHHHC
T ss_pred ---CCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHhCChhhEEEECCChHHHHHHHHHhC
Confidence 226999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred CCcccc-cCCCCchhhhhhhcccCCCccc
Q 022982 252 PKVNLF-VDHSQVMDLECLRGRNLGKSHR 279 (289)
Q Consensus 252 ~~VNLg-I~~~eVl~LE~LR~g~~G~~~~ 279 (289)
|||||| |+|+||++|||||+|+||.++.
T Consensus 221 ~~VNLgNI~~~eVi~LE~LR~GLrgDT~~ 249 (251)
T 1qwg_A 221 SSVNLANIAFDEVISLETLRRGLRGDTFG 249 (251)
T ss_dssp TTCCEEEEEGGGHHHHHHHHHTCSGGGTT
T ss_pred CCccccCCCHHHHHHHHHHHccccccccc
Confidence 999998 9999999999999999987653
No 2
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=100.00 E-value=5.6e-92 Score=651.49 Aligned_cols=241 Identities=21% Similarity=0.370 Sum_probs=211.8
Q ss_pred ccccC-CCCCCCCCCCCCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCcee
Q 022982 8 WKSFD-EYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV 86 (289)
Q Consensus 8 ~~~f~-~~~~R~~KPR~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v 86 (289)
++.|. ++|.|++|||.+|+|||+|||+ |+++++|+|++||+|||++||||||++|||+ |++||++||+|||+|
T Consensus 23 m~~~~f~~~~R~~KPR~~GlT~v~Dkgl----g~~~~~DlLe~ag~yID~lKfg~GTs~l~~~--l~ekI~l~~~~gV~v 96 (276)
T 1u83_A 23 MNDFSLELPVRTNKPRETGQSILIDNGY----PLQFFKDAIAGASDYIDFVKFGWGTSLLTKD--LEEKISTLKEHDITF 96 (276)
T ss_dssp --CCCCCCCCCCCSSCSSSCEEEEESSC----CHHHHHHHHHHHGGGCCEEEECTTGGGGCTT--HHHHHHHHHHTTCEE
T ss_pred cccccCCCCCcCCCCcccCceEEecCCC----CHHHHHHHHHHhhhhcceEEecCcchhhhHH--HHHHHHHHHHcCCeE
Confidence 34555 4699999999999999999999 8889999999999999999999999999997 999999999999999
Q ss_pred cCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccc
Q 022982 87 STG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165 (289)
Q Consensus 87 ~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~ 165 (289)
||| ||||+|+.|| ++++|+++||++||++|||||||++||+++|+++|+++++. |+|+||+|+|++. .+.
T Consensus 97 ~~GGTlfE~~l~qg--~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~EvG~K~~~------~~~ 167 (276)
T 1u83_A 97 FFGGTLFEKYVSQK--KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVLSEVGSKDAE------LAS 167 (276)
T ss_dssp EECHHHHHHHHHTT--CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEEEECSCCC-----------
T ss_pred eCCcHHHHHHHHcC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEeeeccccCcc------ccC
Confidence 997 5999999999 99999999999999999999999999999999999999999 9999999999862 111
Q ss_pred ccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc-----ccccCCCCccHHHH-HHHHhccCCCceEEecCC
Q 022982 166 AFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-----DVCKHADSLRADII-AKVIGRLGLEKTMFEATN 239 (289)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-----GI~d~~G~~r~d~v-~~ii~~l~~eklifEAP~ 239 (289)
..+++++|+++++||+|||++|||||| ||||++|+||+|++ ++|++++|++|||||||+
T Consensus 168 ---------------~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r~d~v~~~i~~~l~~eklifEAp~ 232 (276)
T 1u83_A 168 ---------------RQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDIDINRLIFEAPN 232 (276)
T ss_dssp ----------------CCSTHHHHHHHHHHHHTEEEEEEC------------------CCHHHHHTTTSCGGGEEEECCS
T ss_pred ---------------CCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCcHHHHHHHHHhhCChhhEEEECCC
Confidence 125888899999999999999999996 89999999999999 999999999999999999
Q ss_pred chhHHHHHHHhCCCcccc-cCCCCchhhhhhhcccCCCcc
Q 022982 240 PRTSEWFIRRYGPKVNLF-VDHSQVMDLECLRGRNLGKSH 278 (289)
Q Consensus 240 k~qQ~~~I~~fG~~VNLg-I~~~eVl~LE~LR~g~~G~~~ 278 (289)
|+||+|||++|||||||| |+|+||++|||||+|+||.++
T Consensus 233 k~qq~~fI~~fGp~VNLgNI~~~eVi~LE~LR~GLrgDT~ 272 (276)
T 1u83_A 233 KTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTF 272 (276)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEGGGHHHHHHHHTTCSGGGC
T ss_pred HHHHHHHHHHhCCCccccCCCHHHHHHHHHHHcccccccc
Confidence 999999999999999998 999999999999999998764
No 3
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=96.20 E-value=0.059 Score=49.01 Aligned_cols=161 Identities=11% Similarity=0.055 Sum_probs=103.6
Q ss_pred chhHHHHHHHhhcccccEEEecCccc--------cccChh---HHHHHHHHHHhCCceec--CCc-H-HHHHHHhCCchH
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSH--------SLMPKP---FIEEVVKRAHQHDVYVS--TGD-W-AEHLIRNGPSAF 103 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs--------~l~p~~---~l~eKI~l~~~~gV~v~--~Gt-l-fE~a~~qg~~~~ 103 (289)
....++..++. -+|.+-+...+| -...++ .+++-++.+|++|+.|. -++ + .|.....+|+.+
T Consensus 81 n~~~i~~a~~~---G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~ 157 (295)
T 1ydn_A 81 NMKGYEAAAAA---HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAV 157 (295)
T ss_dssp SHHHHHHHHHT---TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHH
T ss_pred CHHHHHHHHHC---CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHH
Confidence 34445555554 456666665555 222233 34666999999999875 121 1 133334455567
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~ 183 (289)
.++++.+.+.|.+.|=|.|-.--+.+++-.++|+.+++. +.- ..+++... . |
T Consensus 158 ~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~~-~~l~~H~H-n------~------------------- 209 (295)
T 1ydn_A 158 ASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI-APA-HSLAGHYH-D------T------------------- 209 (295)
T ss_dssp HHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT-SCG-GGEEEEEB-C------T-------------------
T ss_pred HHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-CCC-CeEEEEEC-C------C-------------------
Confidence 777777779999999999866678888889999999885 210 12444321 1 1
Q ss_pred HHHHHHHHHHHHHccCcEEEEecccccc------CCCCccHHHHHHHHhccCC
Q 022982 184 VDLLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 184 ~~~~I~~~~~dLeAGA~~ViiEarGI~d------~~G~~r~d~v~~ii~~l~~ 230 (289)
...-+..+...++|||++|=+=--|+-. ..||+.++.+-..+...|.
T Consensus 210 ~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~ 262 (295)
T 1ydn_A 210 GGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGF 262 (295)
T ss_dssp TSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCC
Confidence 1112566788899999977654457776 7899998877766665553
No 4
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=96.19 E-value=0.052 Score=47.14 Aligned_cols=127 Identities=6% Similarity=0.116 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL--EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+++.++.++++||+.||+....+ .++.++..++.+.+++.|+++.. ++.-..
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~------------------------ 85 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYA-VGPIYM------------------------ 85 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEE-EEEEEE------------------------
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEE-Eecccc------------------------
Confidence 689999999999999999998743 56778888999999999998653 332110
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecC--------CchhHHHHHHHhC
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT--------NPRTSEWFIRRYG 251 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP--------~k~qQ~~~I~~fG 251 (289)
.+.+.+.+.++..-+.||.+|.+... .. .-..+.++++..|+ ++.+|.- +..+-..+++..+
T Consensus 86 --~~~~~~~~~i~~A~~lGa~~v~~~p~-----~~--~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~~~~~~ll~~~~ 155 (257)
T 3lmz_A 86 --KSEEEIDRAFDYAKRVGVKLIVGVPN-----YE--LLPYVDKKVKEYDF-HYAIHLHGPDIKTYPDATDVWVHTKDLD 155 (257)
T ss_dssp --CSHHHHHHHHHHHHHHTCSEEEEEEC-----GG--GHHHHHHHHHHHTC-EEEEECCCTTCSSSCSHHHHHHHHTTSC
T ss_pred --CCHHHHHHHHHHHHHhCCCEEEecCC-----HH--HHHHHHHHHHHcCC-EEEEecCCCcccccCCHHHHHHHHHhCC
Confidence 12556666677777899999998642 11 22345566666665 3666654 2334455666555
Q ss_pred CCcccccCCCCc
Q 022982 252 PKVNLFVDHSQV 263 (289)
Q Consensus 252 ~~VNLgI~~~eV 263 (289)
|+|-+..|..+.
T Consensus 156 p~vg~~~D~~h~ 167 (257)
T 3lmz_A 156 PRIGMCLDVGHD 167 (257)
T ss_dssp TTEEEEEEHHHH
T ss_pred CCccEEEchhhH
Confidence 654443554433
No 5
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.07 E-value=0.056 Score=46.01 Aligned_cols=144 Identities=15% Similarity=0.043 Sum_probs=86.5
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+...-++++..++++|++|.|+=.+.-... +-|+..+++ +++++-..-+ .. -.+.+++.|.+.|.|
T Consensus 11 ~~~~~~~~~~~~~~~~diie~G~p~~~~~g~----~~i~~ir~~~~~~~i~~~~~~-----~~--~~~~~~~~~~~~Gad 79 (211)
T 3f4w_A 11 TLPEAMVFMDKVVDDVDIIEVGTPFLIREGV----NAIKAIKEKYPHKEVLADAKI-----MD--GGHFESQLLFDAGAD 79 (211)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHTT----HHHHHHHHHCTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhhcCccEEEeCcHHHHhccH----HHHHHHHHhCCCCEEEEEEEe-----cc--chHHHHHHHHhcCCC
Confidence 4556677777777899999999711111122 234444443 6666433211 12 234458999999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCccccee-eeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHH
Q 022982 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF-AVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCL 195 (289)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~-g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dL 195 (289)
.|=+.+-. +.+...++++.+++.|+++..++ +. | ++ .++++..+
T Consensus 80 ~v~v~~~~---~~~~~~~~~~~~~~~g~~~~v~~~~~-----------------------~------t~---~~~~~~~~ 124 (211)
T 3f4w_A 80 YVTVLGVT---DVLTIQSCIRAAKEAGKQVVVDMICV-----------------------D------DL---PARVRLLE 124 (211)
T ss_dssp EEEEETTS---CHHHHHHHHHHHHHHTCEEEEECTTC-----------------------S------SH---HHHHHHHH
T ss_pred EEEEeCCC---ChhHHHHHHHHHHHcCCeEEEEecCC-----------------------C------CH---HHHHHHHH
Confidence 99996543 34566789999999888765431 11 1 12 56677788
Q ss_pred HccCcEEEEeccccccC-CCCccHHHHHHHHhccC
Q 022982 196 EAGADMIMIDSDDVCKH-ADSLRADIIAKVIGRLG 229 (289)
Q Consensus 196 eAGA~~ViiEarGI~d~-~G~~r~d~v~~ii~~l~ 229 (289)
++|+++|.+. .|.... .+....+.+.++.+.++
T Consensus 125 ~~g~d~i~v~-~g~~g~~~~~~~~~~i~~l~~~~~ 158 (211)
T 3f4w_A 125 EAGADMLAVH-TGTDQQAAGRKPIDDLITMLKVRR 158 (211)
T ss_dssp HHTCCEEEEE-CCHHHHHTTCCSHHHHHHHHHHCS
T ss_pred HcCCCEEEEc-CCCcccccCCCCHHHHHHHHHHcC
Confidence 9999999886 322111 11113466666665443
No 6
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=95.89 E-value=0.043 Score=47.34 Aligned_cols=140 Identities=21% Similarity=0.204 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+++.++.++++||+.||+... .+...+..++.+.+++.|+++..--.-.+.. ..|++. + .
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-----~~d~~~--------r----~ 79 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRD--QVAAIGLGEAGRIVRANGLKLTGLCRGGFFP-----APDASG--------R----E 79 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHH--HHHHHCHHHHHHHHHHHTCEESCEEEEECCC-----CSSHHH--------H----H
T ss_pred CHHHHHHHHHHcCCCEEEeccc--cccccCHHHHHHHHHHcCCceEEeecCCCcC-----CCCHHH--------H----H
Confidence 6889999999999999999764 2345667788889999999876532111111 111100 0 0
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCCC----c--cHHHHHHH---HhccCCCceEEecC------------Cc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADS----L--RADIIAKV---IGRLGLEKTMFEAT------------NP 240 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~----~--r~d~v~~i---i~~l~~eklifEAP------------~k 240 (289)
...+.+.+.++..-+.||..|++-+-........ + -.+.+.++ ++..|+ +|.+|.- +.
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lE~~~~~~~~~~~~~~~~ 158 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGV-PLAIEPLHPMYAADRACVNTL 158 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTC-CEEECCCCGGGTTTTBSCCCH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeECCCcccCCccccCCH
Confidence 1134445555555578999999876322211101 0 01223333 344555 5888851 34
Q ss_pred hhHHHHHHHhCCCcccc--cCCCCc
Q 022982 241 RTSEWFIRRYGPKVNLF--VDHSQV 263 (289)
Q Consensus 241 ~qQ~~~I~~fG~~VNLg--I~~~eV 263 (289)
.+-..+++..++ |+| .|..+.
T Consensus 159 ~~~~~l~~~~~~--~vg~~~D~~h~ 181 (275)
T 3qc0_A 159 GQALDICETLGP--GVGVAIDVYHV 181 (275)
T ss_dssp HHHHHHHHHHCT--TEEEEEEHHHH
T ss_pred HHHHHHHHHhCc--ccEEEEEhhhh
Confidence 567789999998 665 554443
No 7
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=95.69 E-value=0.1 Score=45.95 Aligned_cols=144 Identities=15% Similarity=0.274 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-------cCChhHHHHHHHHHHHcCCcccceeeeecC-CCCCCCcccccccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL-------EIPEETLLRYVRLVKSAGLKAKPKFAVMFN-KSDIPSDRDRAFGAYVAR 173 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~-~~evg~~~d~~~~~~~~~ 173 (289)
.+++.++.++++||+.||++.... .++.++..++.+.+++.|+++.. +..-.. .-..+ ..|++.
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~~~~~l~-~~d~~~------ 102 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS-MCLSAHRRFPLG-SEDDAV------ 102 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE-EEEGGGGTSCTT-CSSHHH------
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE-EecCcccCCCCC-CCCHHH------
Confidence 799999999999999999986542 45677788899999999999753 221000 00011 011100
Q ss_pred CCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHH-------HH---HHHhccCCCceEEecC-----
Q 022982 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADI-------IA---KVIGRLGLEKTMFEAT----- 238 (289)
Q Consensus 174 ~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~-------v~---~ii~~l~~eklifEAP----- 238 (289)
. ....+.+.+.++..-+.||..|++-+-..+.. .-+.+. +. ++++..|+ +|.+|.-
T Consensus 103 --r----~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lEn~~~~~~ 173 (295)
T 3cqj_A 103 --R----AQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQ--EANNETRRRFRDGLKESVEMASRAQV-TLAMEIMDYPLM 173 (295)
T ss_dssp --H----HHHHHHHHHHHHHHHHHTCCEEEECCCSCSSS--CCCHHHHHHHHHHHHHHHHHHHHHTC-EEEEECCSSGGG
T ss_pred --H----HHHHHHHHHHHHHHHHcCCCEEEECCCCCCcC--cCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEeeCCCccc
Confidence 0 01245555666666678999999865322111 112221 22 22333444 5788853
Q ss_pred -CchhHHHHHHHhCC-CcccccCCCC
Q 022982 239 -NPRTSEWFIRRYGP-KVNLFVDHSQ 262 (289)
Q Consensus 239 -~k~qQ~~~I~~fG~-~VNLgI~~~e 262 (289)
...+-..+++..|+ +|-+.+|...
T Consensus 174 ~~~~~~~~l~~~v~~~~vg~~~D~~h 199 (295)
T 3cqj_A 174 NSISKALGYAHYLNNPWFQLYPDIGN 199 (295)
T ss_dssp CSHHHHHHHHHHHCCTTEEEECBHHH
T ss_pred CCHHHHHHHHHhcCCCCeEEEeccch
Confidence 44667789999985 4444355443
No 8
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.63 E-value=0.17 Score=43.78 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS------------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~ 169 (289)
.+++.++.++++||++||+.... ..++.++..++-+.+++.|+++.. ++.-.. .
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~-------~------ 88 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG-TGVYVA-------E------ 88 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEE-EEEECC-------S------
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEE-EeccCC-------c------
Confidence 68999999999999999998652 356788888999999999998643 222110 0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEec
Q 022982 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEA 237 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEA 237 (289)
+.+.+-+.++..-+.||..|.+... .-.-..+.++++..|+ ++.+|.
T Consensus 89 -------------~~~~~~~~i~~A~~lGa~~v~~~~~-------~~~~~~l~~~a~~~gv-~l~~En 135 (262)
T 3p6l_A 89 -------------KSSDWEKMFKFAKAMDLEFITCEPA-------LSDWDLVEKLSKQYNI-KISVHN 135 (262)
T ss_dssp -------------STTHHHHHHHHHHHTTCSEEEECCC-------GGGHHHHHHHHHHHTC-EEEEEC
T ss_pred -------------cHHHHHHHHHHHHHcCCCEEEecCC-------HHHHHHHHHHHHHhCC-EEEEEe
Confidence 1233344555555789999999752 1112345555555554 355554
No 9
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=95.58 E-value=0.18 Score=48.61 Aligned_cols=123 Identities=17% Similarity=0.297 Sum_probs=87.5
Q ss_pred ccEEEecCccccccChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchH-HHHHHHHHHcCCCEEEecCCcc------
Q 022982 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAF-KEYVEDCKQVGFDTIELNVGSL------ 125 (289)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~-~~yl~~~k~lGF~~IEISdGti------ 125 (289)
++.+-||+||..+.+.+.|++.++.++++ ++. .+ .|+.+.-+|+.+ ++.++.+++.|++.|+++--+.
T Consensus 105 i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~--~~--~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~ 180 (457)
T 1olt_A 105 VSQLHWGGGTPTYLNKAQISRLMKLLRENFQFN--AD--AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR 180 (457)
T ss_dssp EEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEE--EE--EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHH
T ss_pred eEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCC--CC--cEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHH
Confidence 78899999999999999999999999873 110 00 011111233333 5788999999999999974443
Q ss_pred ----cCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCc
Q 022982 126 ----EIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (289)
Q Consensus 126 ----~i~~~~r~~lI~~~~~~G~~-v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~ 200 (289)
.-+.++-.+.|+.+++.||. +...+=. +. |. +|.+++.+.++..++.|.+
T Consensus 181 ~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~--Gl----------------Pg-------et~e~~~~tl~~~~~l~~~ 235 (457)
T 1olt_A 181 LVNREQDEEFIFALLNHAREIGFTSTNIDLIY--GL----------------PK-------QTPESFAFTLKRVAELNPD 235 (457)
T ss_dssp HHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEE--SC----------------TT-------CCHHHHHHHHHHHHHHCCS
T ss_pred HhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEc--CC----------------CC-------CCHHHHHHHHHHHHhcCcC
Confidence 24577888999999999997 5554422 11 11 1478889999999999999
Q ss_pred EEEEe
Q 022982 201 MIMID 205 (289)
Q Consensus 201 ~ViiE 205 (289)
.|-+=
T Consensus 236 ~i~~y 240 (457)
T 1olt_A 236 RLSVF 240 (457)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88764
No 10
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.56 E-value=0.16 Score=46.46 Aligned_cols=158 Identities=15% Similarity=0.118 Sum_probs=103.5
Q ss_pred hhHHHHHHHhhcccccEEEecCccccccChh-----------HHHHHHHHHHhCCceec------CCcHHHHHHHhCCch
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPKP-----------FIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSA 102 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~-----------~l~eKI~l~~~~gV~v~------~GtlfE~a~~qg~~~ 102 (289)
...++..++. =+|.+-+..++|-++.+. .+++-++.+|++|+.|. .|.-++- .-+|+.
T Consensus 86 ~~~i~~a~~a---G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~--~~~~~~ 160 (302)
T 2ftp_A 86 LKGFEAALES---GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDG--DVDPRQ 160 (302)
T ss_dssp HHHHHHHHHT---TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHH
T ss_pred HHHHHHHHhC---CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCC--CCCHHH
Confidence 3345555553 467777767776653322 34888999999999883 2321121 233445
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.++++.+.+.|.|.|=|.|-.--+.+.+-.++|+.+++. +. .-.++... ..+
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~-~~-~~~l~~H~-Hn~------------------------ 213 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASE-VP-RERLAGHF-HDT------------------------ 213 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTT-SC-GGGEEEEE-BCT------------------------
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEe-CCC------------------------
Confidence 6666666669999999999877678888888999999874 21 11344432 111
Q ss_pred cHHHHHHHHHHHHHccCcEEEEecccccc------CCCCccHHHHHHHHhccCC
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d------~~G~~r~d~v~~ii~~l~~ 230 (289)
...-+..+...++|||++|=+=-.|+=+ ..||..++.+-..+...|.
T Consensus 214 -~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~ 266 (302)
T 2ftp_A 214 -YGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEI 266 (302)
T ss_dssp -TSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCC
Confidence 1122678888999999976443348877 7899998888777765543
No 11
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=95.51 E-value=0.31 Score=41.86 Aligned_cols=139 Identities=12% Similarity=0.143 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--c-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL--E-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~-i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+++.++.++++||+.||+..... . .+..+..++-+.+++.|+++.+ ++.-.+... . |.+
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~-~~~~~~~~~---~-~~~------------ 82 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVT-INAVYPFNQ---L-TEE------------ 82 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEE-EEEETTTTS---C-CHH------------
T ss_pred CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEe-chhhhccCC---c-HHH------------
Confidence 688999999999999999985432 2 2446677788888999998654 222111110 0 110
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCcc---HHHHHH---HHhccCCCceEEecC--------CchhHH
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLR---ADIIAK---VIGRLGLEKTMFEAT--------NPRTSE 244 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r---~d~v~~---ii~~l~~eklifEAP--------~k~qQ~ 244 (289)
..+.+.+.++..-+.||..|.+-+- .... ..++ .+.+.+ +++..|+ +|.+|.- ...+-.
T Consensus 83 ----~~~~~~~~i~~a~~lG~~~v~~~~g-~~~~-~~~~~~~~~~l~~l~~~a~~~gv-~l~~E~~~~~~~~~~~~~~~~ 155 (272)
T 2q02_A 83 ----VVKKTEGLLRDAQGVGARALVLCPL-NDGT-IVPPEVTVEAIKRLSDLFARYDI-QGLVEPLGFRVSSLRSAVWAQ 155 (272)
T ss_dssp ----HHHHHHHHHHHHHHHTCSEEEECCC-CSSB-CCCHHHHHHHHHHHHHHHHTTTC-EEEECCCCSTTCSCCCHHHHH
T ss_pred ----HHHHHHHHHHHHHHhCCCEEEEccC-CCch-hHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCCCcccccCHHHHH
Confidence 1344455555566789999988432 1111 1121 223333 3444554 5777763 345566
Q ss_pred HHHHHhCCCcccccCCCCch
Q 022982 245 WFIRRYGPKVNLFVDHSQVM 264 (289)
Q Consensus 245 ~~I~~fG~~VNLgI~~~eVl 264 (289)
.+++..+|+|.+.+|..+..
T Consensus 156 ~l~~~v~~~~g~~~D~~h~~ 175 (272)
T 2q02_A 156 QLIREAGSPFKVLLDTFHHH 175 (272)
T ss_dssp HHHHHHTCCCEEEEEHHHHH
T ss_pred HHHHHhCcCeEEEEEchHhh
Confidence 89999996555546555443
No 12
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=95.31 E-value=0.13 Score=44.69 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+++.++.++++||+.||+......-+. +..++-+.+++.|+++..-..... .+. +..
T Consensus 24 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~-~~~-----~~~--------------- 81 (264)
T 1yx1_A 24 GQASFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLEL-WRE-----DGQ--------------- 81 (264)
T ss_dssp CGGGGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEE-ECT-----TSS---------------
T ss_pred CHHHHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhh-cCC-----chh---------------
Confidence 5788999999999999999754332123 666788889999998753211110 000 000
Q ss_pred ccH-HHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCC------chhHHHHHHHh---C
Q 022982 182 EDV-DLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATN------PRTSEWFIRRY---G 251 (289)
Q Consensus 182 ~~~-~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~------k~qQ~~~I~~f---G 251 (289)
. +.+.+.++..-+.||..|.+-.-. +.... .-..+.++++..|+ +|.+|.-. ..+-..+++.. |
T Consensus 82 --~~~~~~~~i~~A~~lGa~~v~~~~g~-~~~~~--~l~~l~~~a~~~Gv-~l~lEn~~~~~~~~~~~~~~ll~~v~~~~ 155 (264)
T 1yx1_A 82 --LNPELEPTLRRAEACGAGWLKVSLGL-LPEQP--DLAALGRRLARHGL-QLLVENDQTPQGGRIEVLERFFRLAERQQ 155 (264)
T ss_dssp --BCTTHHHHHHHHHHTTCSEEEEEEEC-CCSSC--CHHHHHHHHTTSSC-EEEEECCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHHcCCCEEEEecCC-CCcHH--HHHHHHHHHHhcCC-EEEEecCCCCCCCCHHHHHHHHHHHHhcC
Confidence 1 223344444557899999987632 22222 44556667777776 68888653 24566788888 8
Q ss_pred CCcccccCC
Q 022982 252 PKVNLFVDH 260 (289)
Q Consensus 252 ~~VNLgI~~ 260 (289)
++|-+-.|.
T Consensus 156 ~~vg~~~D~ 164 (264)
T 1yx1_A 156 LDLAMTFDI 164 (264)
T ss_dssp CSEEEEEET
T ss_pred CCeEEEEeh
Confidence 765554555
No 13
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.30 E-value=0.026 Score=53.32 Aligned_cols=139 Identities=18% Similarity=0.174 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhC-------CceecCCcHHHHH-HHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHHH
Q 022982 71 FIEEVVKRAHQH-------DVYVSTGDWAEHL-IRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRYV 136 (289)
Q Consensus 71 ~l~eKI~l~~~~-------gV~v~~GtlfE~a-~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i--~~~~r~~lI 136 (289)
.+.|.|+-.++. +|++++..|.+-- +... ...++.+.+.+.|+|+|+||+|+.. + ++.....++
T Consensus 210 ~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~--~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~ 287 (363)
T 3l5l_A 210 FLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE--ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIA 287 (363)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH--HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHH
T ss_pred HHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH--HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHH
Confidence 566777777754 2355554333211 2222 5566778888999999999998642 1 233345666
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEeccccccCCCC
Q 022982 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADS 215 (289)
Q Consensus 137 ~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~ 215 (289)
+.+++. +. +|=++. | .+. | .+.+++.|++| ||.|++ +|.+..
T Consensus 288 ~~ir~~-~~-iPVi~~-------G--------gI~-----------s----~e~a~~~l~~G~aD~V~i-GR~~la---- 330 (363)
T 3l5l_A 288 ERVRRE-AK-LPVTSA-------W--------GFG-----------T----PQLAEAALQANQLDLVSV-GRAHLA---- 330 (363)
T ss_dssp HHHHHH-HT-CCEEEC-------S--------STT-----------S----HHHHHHHHHTTSCSEEEC-CHHHHH----
T ss_pred HHHHHH-cC-CcEEEe-------C--------CCC-----------C----HHHHHHHHHCCCccEEEe-cHHHHh----
Confidence 766663 00 121111 1 111 1 46777889999 999988 565543
Q ss_pred ccHHHHHHHHhccCCCceEEecCCchhHHHHHHHhC
Q 022982 216 LRADIIAKVIGRLGLEKTMFEATNPRTSEWFIRRYG 251 (289)
Q Consensus 216 ~r~d~v~~ii~~l~~eklifEAP~k~qQ~~~I~~fG 251 (289)
..+++.++.+.++.+.. +...+.|..|++.+|+
T Consensus 331 -nPdl~~k~~~~lg~~~~--~~~~~~~~~~~~~~~~ 363 (363)
T 3l5l_A 331 -DPHWAYFAAKELGVEKA--SWTLPAPYAHWLERYR 363 (363)
T ss_dssp -CTTHHHHHHHHTTCTTG--GGGSCHHHHHHHC---
T ss_pred -CchHHHHHHHHcCCCcc--cCCCCchhHhHhhccC
Confidence 26789999998885321 2355678888877663
No 14
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=95.30 E-value=0.12 Score=47.14 Aligned_cols=159 Identities=13% Similarity=0.130 Sum_probs=107.0
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccCh-----------hHHHHHHHHHHhCCceec------CCcHHHHHHHhCCc
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPS 101 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~------~GtlfE~a~~qg~~ 101 (289)
....++..++. -+|.+-+...+|-.+.+ +.+++-|+.+|++|+.|. .|- |.+-..+++
T Consensus 82 ~~~~i~~a~~a---g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~--~~~~~~~~~ 156 (298)
T 2cw6_A 82 NLKGFEAAVAA---GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGC--PYEGKISPA 156 (298)
T ss_dssp SHHHHHHHHHT---TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCB--TTTBSCCHH
T ss_pred CHHhHHHHHHC---CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC--CcCCCCCHH
Confidence 34455666654 46777776666655322 356778999999999884 221 211123445
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+.++.+.+.++|.+.|=+.|-.--+.+++-.++|+.+++. +. .-.+++.+ .. |
T Consensus 157 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~-~~-~~~i~~H~-Hn------~----------------- 210 (298)
T 2cw6_A 157 KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE-VP-LAALAVHC-HD------T----------------- 210 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH-SC-GGGEEEEE-BC------T-----------------
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEE-CC------C-----------------
Confidence 67788888899999999999988899999999999999985 21 11344432 11 1
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEecccccc------CCCCccHHHHHHHHhccCC
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d------~~G~~r~d~v~~ii~~l~~ 230 (289)
...-+..+...++|||+.|=.=--|+=+ ..||..++.+-..+...|.
T Consensus 211 --~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~g~ 263 (298)
T 2cw6_A 211 --YGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGI 263 (298)
T ss_dssp --TSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHHTC
T ss_pred --CchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhcCC
Confidence 1112556777899999976543347766 7999999988877765443
No 15
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=95.10 E-value=0.14 Score=47.94 Aligned_cols=156 Identities=16% Similarity=0.149 Sum_probs=107.4
Q ss_pred hHHHHHHHhhcccccEEEecCccccccCh-----------hHHHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHH
Q 022982 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYV 107 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~G--tlfE~a~~qg~~~~~~yl 107 (289)
+.++..++.- +|.+-+-..+|-.+.+ +.+++-++.++++|+.|... .|+. .-...++.+-+..
T Consensus 100 ~~i~~a~~~g---~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~-~~~~~~~~~~~~~ 175 (337)
T 3ble_A 100 KTVDWIKDSG---AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSN-GFRNSPDYVKSLV 175 (337)
T ss_dssp HHHHHHHHHT---CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH-HHHHCHHHHHHHH
T ss_pred hhHHHHHHCC---CCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC-CCcCCHHHHHHHH
Confidence 3555556544 4556665555543311 46788899999999987754 3322 3344556778888
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHH
Q 022982 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (289)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
+.+.++|.+.|=+.|-.--+.+.+-.++|+.+++. +. .-.+++.+. . | ...-
T Consensus 176 ~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~p-~~~i~~H~H-n------d-------------------~GlA 227 (337)
T 3ble_A 176 EHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQK-YP-DIHFEFHGH-N------D-------------------YDLS 227 (337)
T ss_dssp HHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHH-CT-TSCEEEECB-C------T-------------------TSCH
T ss_pred HHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHh-cC-CCeEEEEec-C------C-------------------cchH
Confidence 88999999999999988889999999999999985 21 123455331 1 1 2223
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
+-.+-..++|||+.|=.=--|+=...||..++.+-..+...
T Consensus 228 ~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 228 VANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp HHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 67778899999996643345888899999988777666543
No 16
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=95.07 E-value=0.33 Score=48.69 Aligned_cols=93 Identities=20% Similarity=0.273 Sum_probs=72.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
.+.+++.+.+.|.+.|-|.+.+-++ +.-...|+.+++.|..|-.-+.-.+ +. .-
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd~--~ni~~~i~~ak~~G~~v~~~i~~~~---------~~---------------~~ 172 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMNDP--RNMAHAMAAVKKAGKHAQGTICYTI---------SP---------------VH 172 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEEEEECCC---------ST---------------TC
T ss_pred cHHHHHHHHhCCCCEEEEEEehhHH--HHHHHHHHHHHHCCCeEEEEEEeee---------CC---------------CC
Confidence 7889999999999999999888777 5556899999999987533332211 11 01
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
|++.+++.+++-.++||+.| .|+|..|-.....+.++++
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I-----~L~DT~G~~~P~~v~~lv~ 211 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSI-----ALKDMAALLKPQPAYDIIK 211 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEE-----EeCCCCCCcCHHHHHHHHH
Confidence 58899999999999999855 4788889888888888876
No 17
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=94.93 E-value=0.2 Score=43.91 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+++.++.++++||+.||+..... .++..++.+.+++.|+++.+ +..-... ... ..|++. + .
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~---~~~~~~~~~~l~~~gl~v~~-~~~~~~~-~l~-~~d~~~--------r----~ 100 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGL---AGRVNEIKQALNGRNIKVSA-ICAGFKG-FIL-STDPAI--------R----K 100 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTC---GGGHHHHHHHHTTSSCEECE-EECCCCS-CTT-BSSHHH--------H----H
T ss_pred CHHHHHHHHHHcCCCEEEecCCch---HHHHHHHHHHHHHcCCeEEE-EecCCCC-cCC-CCCHHH--------H----H
Confidence 688999999999999999998743 45667788888889998754 2221100 000 111100 0 0
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEecc-ccccCCCCccH-------HHHH---HHHhccCCCceEEe--cC-------Cch
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSD-DVCKHADSLRA-------DIIA---KVIGRLGLEKTMFE--AT-------NPR 241 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEar-GI~d~~G~~r~-------d~v~---~ii~~l~~eklifE--AP-------~k~ 241 (289)
...+.+.+.++..-+.||..|++-+- +-++..-..+. +.+. ++++..|+ +|.+| .+ ...
T Consensus 101 ~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~~~~~~~~~~~~~ 179 (287)
T 3kws_A 101 ECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGT-SVIFEPLNRKECFYLRQVA 179 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTC-CEEECCCCTTTCSSCCCHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCcccCcccCCHH
Confidence 12344555555566789999988542 22221000111 1222 23344555 68888 32 355
Q ss_pred hHHHHHHHhC-CCcccccCCCCch
Q 022982 242 TSEWFIRRYG-PKVNLFVDHSQVM 264 (289)
Q Consensus 242 qQ~~~I~~fG-~~VNLgI~~~eVl 264 (289)
+-..+++..| |+|.+.+|..+..
T Consensus 180 ~~~~ll~~v~~~~vg~~~D~~h~~ 203 (287)
T 3kws_A 180 DAASLCRDINNPGVRCMGDFWHMT 203 (287)
T ss_dssp HHHHHHHHHCCTTEEEEEEHHHHH
T ss_pred HHHHHHHHcCCCCeeEEeehHHHH
Confidence 6778999999 6666655554443
No 18
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=94.80 E-value=0.43 Score=43.40 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=74.1
Q ss_pred chhHHHHHHHhhcc-cccEEEecCccccccChhHHHHHHHHHHhCCc----eecC-CcHHHHHHHhCCchHHHHHHHHHH
Q 022982 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (289)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV----~v~~-GtlfE~a~~qg~~~~~~yl~~~k~ 112 (289)
....+..+++.+.+ -+..+.|.+|--.+.+ .+.+.++.+++.+. .+.| |+++ +++++.+++
T Consensus 51 s~e~i~~~i~~~~~~g~~~i~~tGGEPll~~--~l~~li~~~~~~~~~~~i~i~TNG~ll-----------~~~~~~L~~ 117 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKKIRITGGEPLMRR--DLDVLIAKLNQIDGIEDIGLTTNGLLL-----------KKHGQKLYD 117 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESSCGGGST--THHHHHHHHTTCTTCCEEEEEECSTTH-----------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccchh--hHHHHHHHHHhCCCCCeEEEEeCccch-----------HHHHHHHHH
Confidence 55677777765543 3788999999988887 47899999998853 3444 6543 345677788
Q ss_pred cCCCEEEecCCccc-----------CChhHHHHHHHHHHHcCCcccceeee
Q 022982 113 VGFDTIELNVGSLE-----------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 113 lGF~~IEISdGti~-----------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
.|++.|.||=-+.+ .+.+.-.+.|+.+++.|+.|...+-+
T Consensus 118 ~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv 168 (340)
T 1tv8_A 118 AGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVI 168 (340)
T ss_dssp HTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 99999999977652 15677888999999999865554444
No 19
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=94.56 E-value=0.28 Score=48.18 Aligned_cols=95 Identities=17% Similarity=0.247 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
-++.+++.+.+.|.+.|-|.+.+-++ +.-...|+.+++.|.+|..-+.--+ +. .
T Consensus 101 v~~~~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~~v~~~i~~~~---------~~---------------~ 154 (464)
T 2nx9_A 101 VVDTFVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGAHAQGTLCYTT---------SP---------------V 154 (464)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEEEEECCC---------CT---------------T
T ss_pred hhHHHHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCCEEEEEEEeee---------CC---------------C
Confidence 36889999999999999999887776 4556899999999988643332211 01 0
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
-|++.+++.+++-.++||+.| .|+|..|-..+..+.++++.
T Consensus 155 ~~~e~~~~~a~~l~~~Gad~I-----~l~DT~G~~~P~~v~~lv~~ 195 (464)
T 2nx9_A 155 HNLQTWVDVAQQLAELGVDSI-----ALKDMAGILTPYAAEELVST 195 (464)
T ss_dssp CCHHHHHHHHHHHHHTTCSEE-----EEEETTSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEE-----EEcCCCCCcCHHHHHHHHHH
Confidence 158889999999999999866 47888888888888877753
No 20
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=94.54 E-value=0.34 Score=43.48 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=52.9
Q ss_pred hhHHHHHHHhhc--ccccEEEecCccc--------cccChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCchHH
Q 022982 40 HNVLEDIFESMG--QFVDGLKFSGGSH--------SLMPKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFK 104 (289)
Q Consensus 40 ~~~~~DlLe~ag--~yID~lKfg~GTs--------~l~p~~~l~eKI~l~~~~-gV~v~----~GtlfE~a~~qg~~~~~ 104 (289)
+..+.+..+.+- ...|++-+.+++- ...+.+.+.+.++.+++. ++++. ++ + ..+.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~-~---------~~~~ 179 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN-V---------TDIV 179 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC-S---------SCSH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-h---------HHHH
Confidence 455666666555 5789998877643 334667788999988887 77544 33 2 2567
Q ss_pred HHHHHHHHcCCCEEEecCC
Q 022982 105 EYVEDCKQVGFDTIELNVG 123 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdG 123 (289)
++.+.+.+.|.|+|-++++
T Consensus 180 ~~a~~l~~~G~d~i~v~~~ 198 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINT 198 (311)
T ss_dssp HHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 7888999999999999874
No 21
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.46 E-value=0.44 Score=43.76 Aligned_cols=80 Identities=9% Similarity=0.103 Sum_probs=50.2
Q ss_pred hhHHHHHHHhhcccccEEEecCcccc------ccChhHHHHHHHHHHhC----------Cceec---CCcHHHHHHHhCC
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHS------LMPKPFIEEVVKRAHQH----------DVYVS---TGDWAEHLIRNGP 100 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~------l~p~~~l~eKI~l~~~~----------gV~v~---~GtlfE~a~~qg~ 100 (289)
...+.+..+.+.++.|++=+-++|-. +...+.+.+.++-.++. ++++. ..+|- .
T Consensus 152 ~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~-----~-- 224 (336)
T 1f76_A 152 KDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLS-----E-- 224 (336)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCC-----H--
T ss_pred HHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCC-----H--
Confidence 34555555555678898877776543 33445556666665543 45442 12221 1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCccc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSLE 126 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~ 126 (289)
+.+.++.+.+.+.|.|+|.+|+++..
T Consensus 225 ~~~~~~a~~l~~~Gvd~i~vsn~~~~ 250 (336)
T 1f76_A 225 EELIQVADSLVRHNIDGVIATNTTLD 250 (336)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCBCC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCccc
Confidence 14677788999999999999998753
No 22
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.37 E-value=0.49 Score=44.24 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.++++++.+.+.|.+.|.+.-|.- . .++++.+++.|+++. ++-.
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~g~~---~---~~~i~~~~~~g~~v~----~~v~-------------------------- 153 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHFGVP---D---REVIARLRRAGTLTL----VTAT-------------------------- 153 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEESSCC---C---HHHHHHHHHTTCEEE----EEES--------------------------
T ss_pred cHHHHHHHHHhcCCCEEEEeCCCC---c---HHHHHHHHHCCCeEE----EECC--------------------------
Confidence 589999999999999999987753 1 357777787776543 3110
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
+ ++.++...++|||+|++++.
T Consensus 154 -t----~~~a~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 154 -T----PEEARAVEAAGADAVIAQGV 174 (369)
T ss_dssp -S----HHHHHHHHHTTCSEEEEECT
T ss_pred -C----HHHHHHHHHcCCCEEEEeCC
Confidence 1 34566778999999999885
No 23
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=94.37 E-value=0.28 Score=42.58 Aligned_cols=143 Identities=13% Similarity=0.130 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCC-CCCCccccccccccccC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRDRAFGAYVARA 174 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~-evg~~~d~~~~~~~~~~ 174 (289)
.+++.++.++++||+.||+..+. ..++.++..++.+.+++.|+++.+ +....+.. ... ..|++
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~h~~~~~~~~-~~~~~-------- 82 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWEN-AFCHSGYLINLA-SPKDD-------- 82 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGG-EEEECCTTCCTT-CSSHH--------
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcce-eEEecccccccC-CCCHH--------
Confidence 57788999999999999997532 145667888899999999999622 22211110 001 01110
Q ss_pred CCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccH-------HHHHHHHhccCCCceEEecC---------
Q 022982 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIAKVIGRLGLEKTMFEAT--------- 238 (289)
Q Consensus 175 ~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~-------d~v~~ii~~l~~eklifEAP--------- 238 (289)
.+ ....+.+.+.++..-+.||..|.+-.-...+ .-+. +.+.++++...-=+|.+|.-
T Consensus 83 ~r----~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~---~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~ 155 (287)
T 2x7v_A 83 IW----QKSVELLKKEVEICRKLGIRYLNIHPGSHLG---TGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGY 155 (287)
T ss_dssp HH----HHHHHHHHHHHHHHHHHTCCEEEECCEECTT---SCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECS
T ss_pred HH----HHHHHHHHHHHHHHHHcCCCEEEEecCCCCC---CCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCC
Confidence 00 0124455556666667899999885422211 1112 23344443311226778863
Q ss_pred CchhHHHHHHHhC--CCcccccCCC
Q 022982 239 NPRTSEWFIRRYG--PKVNLFVDHS 261 (289)
Q Consensus 239 ~k~qQ~~~I~~fG--~~VNLgI~~~ 261 (289)
+..+-..+++..+ |+|-+.+|..
T Consensus 156 ~~~~~~~l~~~~~~~~~vg~~~D~~ 180 (287)
T 2x7v_A 156 KLEQLKKIRDLVDQRDRVAITYDTC 180 (287)
T ss_dssp SHHHHHHHHHHCSCGGGEEEEEEHH
T ss_pred CHHHHHHHHHhcCCCCCeEEEEEhh
Confidence 3455678999998 4555434443
No 24
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.08 E-value=0.39 Score=43.80 Aligned_cols=116 Identities=20% Similarity=0.284 Sum_probs=81.3
Q ss_pred hHHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~y-l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
-+++| +++|+..|-|+|=+-+. .++.++..++++.+++.|+.+..|+.-
T Consensus 122 iid~~qv~~A~~~GAD~VlLi~a--~l~~~~l~~l~~~a~~lGl~~lvev~t---------------------------- 171 (272)
T 3qja_A 122 VVQPYQIHEARAHGADMLLLIVA--ALEQSVLVSMLDRTESLGMTALVEVHT---------------------------- 171 (272)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCEEEEEESS----------------------------
T ss_pred ccCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHCCCcEEEEcCC----------------------------
Confidence 57788 99999999999988544 456778888999999999987655421
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCC-ceEEecCCc-hhHHHHHHHhCCCccc
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATNP-RTSEWFIRRYGPKVNL 256 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e-klifEAP~k-~qQ~~~I~~fG~~VNL 256 (289)
+ +++++.+++||++|-+-.|.+-.- .+.-+.+.++...++.+ -++-|.=-. ..+..-+...|.+-=+
T Consensus 172 ---~----ee~~~A~~~Gad~IGv~~r~l~~~--~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~Gadgvl 240 (272)
T 3qja_A 172 ---E----QEADRALKAGAKVIGVNARDLMTL--DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVL 240 (272)
T ss_dssp ---H----HHHHHHHHHTCSEEEEESBCTTTC--CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred ---H----HHHHHHHHCCCCEEEECCCccccc--ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 2 344556688999999987743111 23345677787777633 456666544 6677778888876444
No 25
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=94.07 E-value=0.27 Score=45.14 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=105.1
Q ss_pred HHHHHHHhh-cccccEEEecCccccccCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHH
Q 022982 42 VLEDIFESM-GQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVED 109 (289)
Q Consensus 42 ~~~DlLe~a-g~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~ 109 (289)
.++..++.. +.=+|.+-+-..+|-+..+ +.+++-++.++++|..|..+- |.+-..+++.+-++.+.
T Consensus 81 di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~--~d~~~~~~~~~~~~~~~ 158 (293)
T 3ewb_X 81 DIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP--EDATRSDRAFLIEAVQT 158 (293)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE--ETGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe--ccCCCCCHHHHHHHHHH
Confidence 344455531 1126666666666654422 236788899999999877532 22334455677888899
Q ss_pred HHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc--cceeeeecCCCCCCCccccccccccccCCCCccccccHHHH
Q 022982 110 CKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (289)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v--~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
+.++|.+.|-+.|-.--+.+.+-.++|+.+++. +.- .-.+++.+. . |...-
T Consensus 159 ~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~~~~l~~H~H-n-------------------------d~Gla 211 (293)
T 3ewb_X 159 AIDAGATVINIPDTVGYTNPTEFGQLFQDLRRE-IKQFDDIIFASHCH-D-------------------------DLGMA 211 (293)
T ss_dssp HHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHH-CTTGGGSEEEEECB-C-------------------------TTSCH
T ss_pred HHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHh-cCCccCceEEEEeC-C-------------------------CcChH
Confidence 999999999999999999999999999999884 110 012455331 1 12223
Q ss_pred HHHHHHHHHccCcEEEEecc--ccccCCCCccHHHHHHHHh
Q 022982 188 IRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEar--GI~d~~G~~r~d~v~~ii~ 226 (289)
+-.+...++|||+. +++- |+=...||.-++.+-..+.
T Consensus 212 ~AN~laA~~aGa~~--vd~sv~GlGeraGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 212 TANALAAIENGARR--VEGTINGIGERAGNTALEEVAVALH 250 (293)
T ss_dssp HHHHHHHHHTTCCE--EEEBGGGCCTTTCBCBHHHHHHHHH
T ss_pred HHHHHHHHHhCCCE--EEeeccccccccccHhHHHHHHHHH
Confidence 67788899999994 5775 8888999999887766554
No 26
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=93.93 E-value=0.95 Score=41.00 Aligned_cols=131 Identities=19% Similarity=0.156 Sum_probs=89.8
Q ss_pred chhHHHHHHHhhcc-cccEEEecCccccccChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+..+.+.++.+-+ -+..+-|.+|...+++.+.+.+.++.+++.++.+.. .+. .-++.++.+++.|++
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~----------l~~e~l~~L~~ag~~ 154 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE----------WPREYYEKWKEAGAD 154 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC----------CCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC----------CCHHHHHHHHHhCCC
Confidence 34455555544333 377888999996677767899999999999887763 221 236778888999999
Q ss_pred EEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 117 TIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 117 ~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
.+-+|--+. .-+.+++.+.|+.+++.|+.+.+ +.-.+.. . ++.++
T Consensus 155 ~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~--~~i~G~p----~-------------------et~e~ 209 (348)
T 3iix_A 155 RYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGA--GSMVGLP----G-------------------QTIDD 209 (348)
T ss_dssp EEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEE--CBEESCT----T-------------------CCHHH
T ss_pred EEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeecc--ceEEeCC----C-------------------CCHHH
Confidence 998875554 23788999999999999986433 3222210 0 13666
Q ss_pred HHHHHHHHHHccCcEEEE
Q 022982 187 LIRRAERCLEAGADMIMI 204 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~Vii 204 (289)
+.+.+....+.|++.|-+
T Consensus 210 ~~~~~~~l~~l~~~~i~i 227 (348)
T 3iix_A 210 LVDDLLFLKEHDFDMVGI 227 (348)
T ss_dssp HHHHHHHHHHHTCSEECC
T ss_pred HHHHHHHHHhcCCCEEee
Confidence 677777666778887654
No 27
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=93.88 E-value=0.2 Score=44.54 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCC-CCCCccc-ccccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRD-RAFGAYVAR 173 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~-evg~~~d-~~~~~~~~~ 173 (289)
.+++.++.++++||++||+.... ..++.++..++-+.+++.|+++.+ +-.+.. ... ..| ++
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~h~~~~~nl~-s~d~~~------- 87 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIV---VHAPYIINIG-NTTNLD------- 87 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEE---EECCTTCCTT-CSSCHH-------
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEE---EeccccccCC-CCCcHH-------
Confidence 58899999999999999994322 134467777888889999995322 211100 000 011 10
Q ss_pred CCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh---ccC----CCceEEecC--------
Q 022982 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG---RLG----LEKTMFEAT-------- 238 (289)
Q Consensus 174 ~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~---~l~----~eklifEAP-------- 238 (289)
.+ ....+.+.+.++.+-+.||..|++-.-... +.-+.+..+.+++ .+. -=+|.+|.-
T Consensus 88 -~r----~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~---~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~ 159 (303)
T 3aal_A 88 -TF----SLGVDFLRAEIERTEAIGAKQLVLHPGAHV---GAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECG 159 (303)
T ss_dssp -HH----HHHHHHHHHHHHHHHHHTCSEEEECCEECT---TSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEEC
T ss_pred -HH----HHHHHHHHHHHHHHHHcCCCEEEECCCcCC---CCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccC
Confidence 00 112555666667777889999988653221 1122222322222 221 137888875
Q ss_pred -CchhHHHHHHHhC--CCcccccCCCCc
Q 022982 239 -NPRTSEWFIRRYG--PKVNLFVDHSQV 263 (289)
Q Consensus 239 -~k~qQ~~~I~~fG--~~VNLgI~~~eV 263 (289)
.+.+-..+|+..+ |+|-+.+|..++
T Consensus 160 ~t~~~~~~li~~v~~~~~vg~~lD~~H~ 187 (303)
T 3aal_A 160 RTFEELAYIIDGVAYNDKLSVCFDTCHT 187 (303)
T ss_dssp SSHHHHHHHHHHCTTGGGEEEEEEHHHH
T ss_pred CCHHHHHHHHHhcCCCCCEEEEEEccCH
Confidence 4556677999998 455554555443
No 28
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=93.81 E-value=0.98 Score=42.28 Aligned_cols=202 Identities=15% Similarity=0.146 Sum_probs=120.7
Q ss_pred hhHHHHHHHhhcccc--cEEEecCccccccChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHc
Q 022982 40 HNVLEDIFESMGQFV--DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQV 113 (289)
Q Consensus 40 ~~~~~DlLe~ag~yI--D~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~l 113 (289)
...++.+++.|-+.= =++-++-|+...++.+.+...+..+.+++|+|.. |..+ +.+..|-+.
T Consensus 27 ~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~------------e~~~~ai~~ 94 (305)
T 1rvg_A 27 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSY------------ESVLRALRA 94 (305)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSH------------HHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCH------------HHHHHHHHc
Confidence 344444554432211 1344444443333444445554444446666664 3334 344566789
Q ss_pred CCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 114 GFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 114 GF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
||+.|=|.--. +|.++= .++++.+...|.-|--|+|.=-+ .+|.. ... .-.+ ...||++..+
T Consensus 95 GFtSVMiDgS~--~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg------~Ed~~---~~~--~~~~-~yT~Peea~~ 160 (305)
T 1rvg_A 95 GFTSVMIDKSH--EDFETNVRETRRVVEAAHAVGVTVEAELGRLAG------IEEHV---AVD--EKDA-LLTNPEEARI 160 (305)
T ss_dssp TCSEEEECCTT--SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCC------SCC-----------CCT-TCCCHHHHHH
T ss_pred CCCeeeeCCCC--CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccC------ccCCc---ccc--cccc-ccCCHHHHHH
Confidence 99999886554 455443 36778888899999999998321 12110 000 0000 1126888888
Q ss_pred HHHHHHHccCcEEEEec---ccccc--CCCCccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCCccc--ccCCC
Q 022982 190 RAERCLEAGADMIMIDS---DDVCK--HADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPKVNL--FVDHS 261 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEa---rGI~d--~~G~~r~d~v~~ii~~l~~eklifEAP-~k~qQ~~~I~~fG~~VNL--gI~~~ 261 (289)
.+++ -|.|.+=+== -|.|. .+-.++.|.+++|-+.++.-=++==+. -|+..+..|+.||-++.= ||+.+
T Consensus 161 Fv~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e 237 (305)
T 1rvg_A 161 FMER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPE 237 (305)
T ss_dssp HHHH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHH
T ss_pred HHHH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHH
Confidence 7774 5888665432 28998 566899999999999887443443333 477888999999999876 47766
Q ss_pred Cchhhhhhhcc
Q 022982 262 QVMDLECLRGR 272 (289)
Q Consensus 262 eVl~LE~LR~g 272 (289)
|+- +|.+.|
T Consensus 238 ~i~--~ai~~G 246 (305)
T 1rvg_A 238 DIK--KAISLG 246 (305)
T ss_dssp HHH--HHHHTT
T ss_pred HHH--HHHHCC
Confidence 653 244444
No 29
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=93.68 E-value=0.78 Score=42.48 Aligned_cols=129 Identities=12% Similarity=0.069 Sum_probs=86.4
Q ss_pred chhHHHHHHHhhcc-cccEEEecCcc--ccccChhHHHHHHHHHHhCCceec--CCcHHHHHHHhCCchHHHHHHHHHHc
Q 022982 39 SHNVLEDIFESMGQ-FVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQV 113 (289)
Q Consensus 39 g~~~~~DlLe~ag~-yID~lKfg~GT--s~l~p~~~l~eKI~l~~~~gV~v~--~GtlfE~a~~qg~~~~~~yl~~~k~l 113 (289)
.+.++.+.++.+.+ -++-+-|++|+ -...+.+.+.+.++.+++.|+.++ +|. .-++.++.+++.
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~-----------l~~e~l~~L~~a 168 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT-----------LSESQAQRLANA 168 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS-----------CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC-----------CCHHHHHHHHHC
Confidence 45555555544322 36777787765 344566789999999999988654 242 235678888999
Q ss_pred CCCEEEecCCcc---------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccH
Q 022982 114 GFDTIELNVGSL---------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (289)
Q Consensus 114 GF~~IEISdGti---------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~ 184 (289)
|++.|-||=.+- .-+.+++.+.|+.+++.|+.+. .+.-.+.. ++.
T Consensus 169 Gvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~--~~~I~Gl~------------------------et~ 222 (369)
T 1r30_A 169 GLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVC--SGGIVGLG------------------------ETV 222 (369)
T ss_dssp CCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEE--CCEEECSS------------------------CCH
T ss_pred CCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeee--eeeEeeCC------------------------CCH
Confidence 999999886551 1456889999999999998654 33332211 136
Q ss_pred HHHHHHHHHHHHcc--CcEEEE
Q 022982 185 DLLIRRAERCLEAG--ADMIMI 204 (289)
Q Consensus 185 ~~~I~~~~~dLeAG--A~~Vii 204 (289)
+++++.++.-.+.| .+.|-+
T Consensus 223 ed~~~~l~~l~~l~~~~~~i~~ 244 (369)
T 1r30_A 223 KDRAGLLLQLANLPTPPESVPI 244 (369)
T ss_dssp HHHHHHHHHHHSSSSCCSEEEE
T ss_pred HHHHHHHHHHHhhcCCCCEEEe
Confidence 66677777666676 666554
No 30
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.67 E-value=0.35 Score=44.27 Aligned_cols=100 Identities=9% Similarity=0.067 Sum_probs=71.8
Q ss_pred HHHHHHHHHcCCCEEEecCCccc--------CChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLE--------IPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~--------i~~~~----r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~ 171 (289)
.+.++.+.+.|++.|-|.+++-+ ++.++ -.+.|+.+++.|..|-.+++.-++. ..+
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~-----e~~------- 153 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGC-----PYD------- 153 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCB-----TTT-------
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC-----CcC-------
Confidence 46788888899999999887744 34333 3577899999999987777764321 111
Q ss_pred ccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
+..|++.+++.+++..++||+.|-+ .|..|-..+..+.++++.+
T Consensus 154 --------~~~~~~~~~~~~~~~~~~G~d~i~l-----~DT~G~~~P~~~~~lv~~l 197 (302)
T 2ftp_A 154 --------GDVDPRQVAWVARELQQMGCYEVSL-----GDTIGVGTAGATRRLIEAV 197 (302)
T ss_dssp --------BCCCHHHHHHHHHHHHHTTCSEEEE-----EESSSCCCHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHcCCCEEEE-----eCCCCCcCHHHHHHHHHHH
Confidence 0126999999999999999998764 4666766777777766544
No 31
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.66 E-value=0.26 Score=42.56 Aligned_cols=101 Identities=11% Similarity=0.121 Sum_probs=74.2
Q ss_pred HHHHHHHhhccc-ccEEEecCcc-----------ccccChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGS-----------HSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVE 108 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT-----------s~l~p~~~l~eKI~l~~~~gV~v~~-GtlfE~a~~qg~~~~~~yl~ 108 (289)
.+++.++.+.+. .|.+=+.... ...++++.+++.-++++++|+.++. +.+.. ...+.+++.++
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~ 98 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVA----EKSSDWEKMFK 98 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECC----SSTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCC----ccHHHHHHHHH
Confidence 355566555554 7888776543 1234566789999999999998775 33322 23457999999
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 022982 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
.|+.+|.+.|-+.-| .+.+.++.+.+++.|+++.-|-.
T Consensus 99 ~A~~lGa~~v~~~~~-----~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 99 FAKAMDLEFITCEPA-----LSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HHHHTTCSEEEECCC-----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHcCCCEEEecCC-----HHHHHHHHHHHHHhCCEEEEEeC
Confidence 999999999999865 46778999999999998666655
No 32
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=93.47 E-value=1.6 Score=41.37 Aligned_cols=77 Identities=18% Similarity=0.215 Sum_probs=52.9
Q ss_pred HHHHHH---HhhcccccEEEecCccc------cccChhHHHHHHHHHHh--------CCce----ecCC-cHHHHHHHhC
Q 022982 42 VLEDIF---ESMGQFVDGLKFSGGSH------SLMPKPFIEEVVKRAHQ--------HDVY----VSTG-DWAEHLIRNG 99 (289)
Q Consensus 42 ~~~DlL---e~ag~yID~lKfg~GTs------~l~p~~~l~eKI~l~~~--------~gV~----v~~G-tlfE~a~~qg 99 (289)
..+|+. +..++|.|++=+=.||- .+..++.+.+.++..++ .+++ +.|+ +.
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~-------- 233 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS-------- 233 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH--------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCH--------
Confidence 445554 45667788887766542 45667778888877654 3444 4454 22
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccC
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i 127 (289)
+.+.++.+.|.+.|.|.|-+++.+...
T Consensus 234 -~~~~~ia~~~~~aGadgi~v~ntt~~r 260 (367)
T 3zwt_A 234 -QDKEDIASVVKELGIDGLIVTNTTVSR 260 (367)
T ss_dssp -HHHHHHHHHHHHHTCCEEEECCCBSCC
T ss_pred -HHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 257788899999999999999998654
No 33
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=93.28 E-value=0.43 Score=44.09 Aligned_cols=157 Identities=10% Similarity=0.076 Sum_probs=104.7
Q ss_pred hhHHHHHHHhhcccccEEEecCccccccCh-----------hHHHHHHHHHHhCCceec------CCcHHHHHHHhCCch
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSA 102 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~------~GtlfE~a~~qg~~~ 102 (289)
...++..++.- +|.+-+...+|-.+.+ +.+++-|+.++++|..|. .|--++- .-+++.
T Consensus 84 ~~~i~~a~~~g---~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~--~~~~~~ 158 (307)
T 1ydo_A 84 QRGLENALEGG---INEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK--DVPIEQ 158 (307)
T ss_dssp HHHHHHHHHHT---CSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHH
T ss_pred HHhHHHHHhCC---cCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC--CCCHHH
Confidence 34555566643 6666666666544221 345788999999999884 2322221 223446
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.++.+.+.++|.+.|=|.|-.--+.+++-.++|+.+++. +. .-.+++.+. .|
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~-~~~l~~H~H-------nd------------------ 211 (307)
T 1ydo_A 159 VIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR-FP-ANQIALHFH-------DT------------------ 211 (307)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT-SC-GGGEEEECB-------GG------------------
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEEC-------CC------------------
Confidence 7777788899999999999988889999999999999884 21 113455321 11
Q ss_pred cHHHHHHHHHHHHHccCcEEEEecccccc------CCCCccHHHHHHHHhccC
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLG 229 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d------~~G~~r~d~v~~ii~~l~ 229 (289)
...-+..+...++|||+.|=.=--|+=. ..||..++.+-..+...|
T Consensus 212 -~Gla~AN~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~g 263 (307)
T 1ydo_A 212 -RGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMD 263 (307)
T ss_dssp -GSCHHHHHHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHTT
T ss_pred -CchHHHHHHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhcC
Confidence 2223677788999999865333347766 789999887776765544
No 34
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=93.25 E-value=0.77 Score=40.65 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cC--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL-EI--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i--~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+++.++.++++||+.||+..... .+ +..+..++-+.+++.|+++.. ++. . .... ..|+ ...
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~-~--~~~~-~~~~--------~~~-- 101 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE-VEY-I--TQWG-TAED--------RTA-- 101 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE-EEC-B--CCCS-STTT--------CCH--
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe-ehh-h--hccc-cCCh--------HHH--
Confidence 789999999999999999975321 11 234556788888999998765 222 1 1110 0011 000
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCc--cHHHHHHHHhc-cCCCceEEec------CCchhHHHHHHH
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSL--RADIIAKVIGR-LGLEKTMFEA------TNPRTSEWFIRR 249 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~--r~d~v~~ii~~-l~~eklifEA------P~k~qQ~~~I~~ 249 (289)
+..+.+.+.++..-+.||..|.+ +- ... -.+ -.+.+.++.+. .|+ +|.+|. ....+-..+++.
T Consensus 102 ---~~~~~~~~~i~~A~~lGa~~v~~-g~--~~~-~~~~~~~~~l~~l~~~a~Gv-~l~lE~~~~~~~~~~~~~~~l~~~ 173 (296)
T 2g0w_A 102 ---EQQKKEQTTFHMARLFGVKHINC-GL--LEK-IPEEQIIVALGELCDRAEEL-IIGLEFMPYSGVADLQAAWRVAEA 173 (296)
T ss_dssp ---HHHHHHHHHHHHHHHHTCCEEEE-CC--CSC-CCHHHHHHHHHHHHHHHTTS-EEEEECCTTSSSCSHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHcCCCEEEE-cC--CCC-CCHHHHHHHHHHHHHHhcCC-EEEEEecCCCCCCCHHHHHHHHHH
Confidence 01344455555555789999988 32 211 111 12223333322 344 677885 345566789999
Q ss_pred hCC-CcccccCC
Q 022982 250 YGP-KVNLFVDH 260 (289)
Q Consensus 250 fG~-~VNLgI~~ 260 (289)
.|+ +|-+.+|.
T Consensus 174 v~~~~vgl~~D~ 185 (296)
T 2g0w_A 174 CGRDNAQLICDT 185 (296)
T ss_dssp HTCTTEEEEEEH
T ss_pred hCCCCeEEEEeh
Confidence 985 44443443
No 35
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=93.24 E-value=0.91 Score=40.24 Aligned_cols=146 Identities=16% Similarity=0.193 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt-i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+++ ++.++++||+.||+.... ...+.++..++.+.+++.|+++..-.+.- ...... ..|++. +
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~-~~~~l~-~~d~~~--------r---- 102 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPS-KTKNLS-SEDAAV--------R---- 102 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCC-SSSCSS-CSCHHH--------H----
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCC-CCCCCC-CCCHHH--------H----
Confidence 7889 999999999999998542 23344677788899999999977621110 000000 111100 0
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEec---cccccCCCCccH-------HHHH---HHHhccCCCceEEecC---------
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDS---DDVCKHADSLRA-------DIIA---KVIGRLGLEKTMFEAT--------- 238 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEa---rGI~d~~G~~r~-------d~v~---~ii~~l~~eklifEAP--------- 238 (289)
....+.+.+.++..-+.||..|++-. .|.+.....-+. +.+. +.++..|+ +|.+|.-
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~ 181 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGI-NLCIEVLNRFENHVLN 181 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCCTTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCC-EEEEeecccccccccC
Confidence 01244555566666678999998542 133211110111 1222 23334454 5888864
Q ss_pred CchhHHHHHHHhCC-CcccccCCCCc
Q 022982 239 NPRTSEWFIRRYGP-KVNLFVDHSQV 263 (289)
Q Consensus 239 ~k~qQ~~~I~~fG~-~VNLgI~~~eV 263 (289)
...+-..++++.|+ +|-+.+|....
T Consensus 182 ~~~~~~~l~~~v~~~~vg~~~D~~H~ 207 (309)
T 2hk0_A 182 TAAEGVAFVKDVGKNNVKVMLDTFHM 207 (309)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEHHHH
T ss_pred CHHHHHHHHHHcCCCCeEEEEehhhH
Confidence 34567789999984 55544554433
No 36
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=93.24 E-value=0.44 Score=41.82 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee--ecCCCCCCC-ccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV--MFNKSDIPS-DRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~--k~~~~evg~-~~d~~~~~~~~~~~~~~ 178 (289)
.+++.++.++++||+.||+..... ...+..++-+.+++.|+++.+ ++. .++...... ..|++. +
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~~l~~~gl~~~~-~~~~~p~~~~~~~l~~~d~~~--------r-- 108 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDP--SIVDWNEVKILSEELNLPICA-IGTGQAYLADGLSLTHPNDEI--------R-- 108 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCG--GGSCHHHHHHHHHHHTCCEEE-EECTHHHHTTCCCTTCSSHHH--------H--
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCc--chhhHHHHHHHHHHcCCeEEE-EeccCccccCCCCCCCCCHHH--------H--
Confidence 688999999999999999986532 235566788888999999743 222 000000000 011100 0
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHH-------HHHHHHhccCCCceEEecC---------Cchh
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRAD-------IIAKVIGRLGLEKTMFEAT---------NPRT 242 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d-------~v~~ii~~l~~eklifEAP---------~k~q 242 (289)
....+.+.+.++..-+.||..|+.-..|.+. +.-+.+ .+.++.+...-=+|.+|.- ...+
T Consensus 109 --~~~~~~~~~~i~~A~~lG~~~v~~~~~g~~~--~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn~~~~~~~~~~~~~~ 184 (290)
T 2zvr_A 109 --KKAIERVVKHTEVAGMFGALVIIGLVRGRRE--GRSYEETEELFIESMKRLLELTEHAKFVIEPLNRYETDFINTIDD 184 (290)
T ss_dssp --HHHHHHHHHHHHHHHHHTCEEEESGGGCCCT--TSCHHHHHHHHHHHHHHHHHHCSSCCEEECCCCTTTCSSCCSHHH
T ss_pred --HHHHHHHHHHHHHHHHcCCCEEEecCCCCCC--CcCHHHHHHHHHHHHHHHHHHhccCEEEEEeCCCcCccccCCHHH
Confidence 0124455556666667899998832124321 112222 2233332211146888863 4567
Q ss_pred HHHHHHHhCC-CcccccCCCC
Q 022982 243 SEWFIRRYGP-KVNLFVDHSQ 262 (289)
Q Consensus 243 Q~~~I~~fG~-~VNLgI~~~e 262 (289)
-..+++..|+ +|-+..|...
T Consensus 185 ~~~l~~~~~~~~vgl~~D~~h 205 (290)
T 2zvr_A 185 ALRILRKINSNRVGILADTFH 205 (290)
T ss_dssp HHHHHHHHCCTTEEEEEEHHH
T ss_pred HHHHHHHcCCCCEEEEEehhH
Confidence 7789999984 5544355443
No 37
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.16 E-value=1.9 Score=39.84 Aligned_cols=145 Identities=12% Similarity=0.132 Sum_probs=100.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+ |
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv-------g---------------- 101 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV-------S---------------- 101 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-------C----------------
Confidence 368888999999999999876543 479999999999999883 0011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.+++.+
T Consensus 102 ----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~ 177 (315)
T 3na8_A 102 ----DLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVRE 177 (315)
T ss_dssp ----CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhc
Confidence 114788899999999999999999652 15663 236778888888555
Q ss_pred cCCCce--EEec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKT--MFEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~ekl--ifEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
.| +| |=|+ .+-.+...+++..++++.+.--.++ +.+++|..|--|
T Consensus 178 ~p--nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~D~-~~l~~l~~G~~G 225 (315)
T 3na8_A 178 VD--NVTMVKESTGDIQRMHKLRLLGEGRVPFYNGCNP-LALEAFVAGAKG 225 (315)
T ss_dssp ST--TEEEEEECSSCHHHHHHHHHHTTTCSCEEECCGG-GHHHHHHHTCSE
T ss_pred CC--CEEEEECCCCCHHHHHHHHHHcCCCEEEEeCchH-HHHHHHHCCCCE
Confidence 55 33 2244 4566777888888888777654444 458998877444
No 38
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=93.09 E-value=0.29 Score=43.38 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=59.3
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
++++.+.|.|.|-+.. +.-.+++...++++.+++.|+.+..++.-
T Consensus 94 i~~~~~aGad~I~l~~-~~~~~p~~l~~~i~~~~~~g~~v~~~v~t---------------------------------- 138 (229)
T 3q58_A 94 VDALAQAGADIIAFDA-SFRSRPVDIDSLLTRIRLHGLLAMADCST---------------------------------- 138 (229)
T ss_dssp HHHHHHHTCSEEEEEC-CSSCCSSCHHHHHHHHHHTTCEEEEECSS----------------------------------
T ss_pred HHHHHHcCCCEEEECc-cccCChHHHHHHHHHHHHCCCEEEEecCC----------------------------------
Confidence 5678999999997644 44445577779999999988876654321
Q ss_pred HHHHHHHHHHccCcEEEEeccccccC--CCCccHHHHHHHHh
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIG 226 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~--~G~~r~d~v~~ii~ 226 (289)
.+.+++..++||++|.+-.+|.+.. ......+++.++.+
T Consensus 139 -~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~ 179 (229)
T 3q58_A 139 -VNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSH 179 (229)
T ss_dssp -HHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHT
T ss_pred -HHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHH
Confidence 4667788899999998877776443 22334566776665
No 39
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=93.01 E-value=0.47 Score=43.04 Aligned_cols=108 Identities=12% Similarity=0.140 Sum_probs=81.6
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
+.+++..|-|+|=+.-. .++.++..++++.+++.|+.++-|+.-
T Consensus 116 i~ea~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~---------------------------------- 159 (251)
T 1i4n_A 116 VKLASSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHS---------------------------------- 159 (251)
T ss_dssp HHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 44589999999998877 467789999999999999999888764
Q ss_pred HHHHHHHHHHc-cCcEEEEeccccccCCCCccHHHHHHHHhccCCCc-eEEecCCc-hhHHHHHHHhCCCc
Q 022982 187 LIRRAERCLEA-GADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK-TMFEATNP-RTSEWFIRRYGPKV 254 (289)
Q Consensus 187 ~I~~~~~dLeA-GA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ek-lifEAP~k-~qQ~~~I~~fG~~V 254 (289)
.+++++.+++ |++.|-|+-|++-.- .+.-+...+++..++.+. +|-|+=-. ..+...+... .+.
T Consensus 160 -~eE~~~A~~l~g~~iIGinnr~l~t~--~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~a 226 (251)
T 1i4n_A 160 -REDLEKVFSVIRPKIIGINTRDLDTF--EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNA 226 (251)
T ss_dssp -HHHHHHHHTTCCCSEEEEECBCTTTC--CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSE
T ss_pred -HHHHHHHHhcCCCCEEEEeCcccccC--CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCE
Confidence 3567888999 999999999987443 344566677888887654 55577643 5555555555 443
No 40
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=93.01 E-value=2.4 Score=38.45 Aligned_cols=144 Identities=16% Similarity=0.096 Sum_probs=101.1
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=.|+ |
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv-------g--------------- 77 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGA-------G--------------- 77 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC-------C---------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C---------------
Confidence 36888899999999999987653 4489999999999999874 2 11111233 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -+|+. .| ++..+.+.++++
T Consensus 78 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 78 -----SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 113678899999999999999998652 15653 23 678888888875
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+. .+|+- |+ .+-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 153 ~~--pnIvgiK~s~gd~~~~~~~~~~~~~~f~v~-~G~d~~~~~~l~~G~~G 201 (292)
T 2vc6_A 153 DC--PNVKGVXDATGNLLRPSLERMACGEDFNLL-TGEDGTALGYMAHGGHG 201 (292)
T ss_dssp HC--TTEEEEEECSCCTHHHHHHHHHSCTTSEEE-ESCGGGHHHHHHTTCCE
T ss_pred hC--CCEEEEecCCCCHHHHHHHHHHcCCCEEEE-ECchHHHHHHHHcCCCE
Confidence 34 34432 44 46677778888888877764 33455678999877554
No 41
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=92.98 E-value=0.4 Score=41.47 Aligned_cols=145 Identities=10% Similarity=0.130 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHHHHHHcCCcccceeeeecCCC-CCCCccccccccccccC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRDRAFGAYVARA 174 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~-evg~~~d~~~~~~~~~~ 174 (289)
.+++.++.++++||+.||+..... .++.++..++-+.+++.|+++.+ +..-.+.. ... ..|++
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~l~-~~~~~-------- 82 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQ-ILPHDSYLINLG-HPVTE-------- 82 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGG-BCCBCCTTCCTT-CSSHH--------
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCcee-EEecCCcccccC-CCCHH--------
Confidence 588999999999999999953322 35667888899999999998521 11110000 000 01110
Q ss_pred CCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCC--Ccc---HHHHHHHHhc-cCCCceEEecC---------C
Q 022982 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHAD--SLR---ADIIAKVIGR-LGLEKTMFEAT---------N 239 (289)
Q Consensus 175 ~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G--~~r---~d~v~~ii~~-l~~eklifEAP---------~ 239 (289)
.+ ....+.+.+.++..-+.||..|.+-.-....... ... .+.+.+++++ .|+ +|.+|.- .
T Consensus 83 ~r----~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv-~l~lEn~~~~~~~~~~~ 157 (285)
T 1qtw_A 83 AL----EKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGV-TAVIENTAGQGSNLGFK 157 (285)
T ss_dssp HH----HHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSC-EEEEECCCCCTTBCCSS
T ss_pred HH----HHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCC-EEEEecCCCCCCcccCC
Confidence 00 1124455556666667899999886532211100 001 1223444433 343 6888864 3
Q ss_pred chhHHHHHHHhC--CCcccccCCC
Q 022982 240 PRTSEWFIRRYG--PKVNLFVDHS 261 (289)
Q Consensus 240 k~qQ~~~I~~fG--~~VNLgI~~~ 261 (289)
..+-..+++..+ |+|-+.+|..
T Consensus 158 ~~~~~~l~~~v~~~~~~g~~~D~~ 181 (285)
T 1qtw_A 158 FEHLAAIIDGVEDKSRVGVCIDTC 181 (285)
T ss_dssp HHHHHHHHHHCSCGGGEEEEEEHH
T ss_pred HHHHHHHHHhhcCccceEEEEEhH
Confidence 455678899984 3444435543
No 42
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=92.88 E-value=0.77 Score=41.76 Aligned_cols=138 Identities=9% Similarity=0.129 Sum_probs=93.4
Q ss_pred chhHHHHHHHhhccc-ccEEEecCccc-cccChhHH--------------HHHHHHHHhCC--ceecCCcHHHHHHHhCC
Q 022982 39 SHNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFI--------------EEVVKRAHQHD--VYVSTGDWAEHLIRNGP 100 (289)
Q Consensus 39 g~~~~~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l--------------~eKI~l~~~~g--V~v~~GtlfE~a~~qg~ 100 (289)
.+..+.+++...-+- .|++=+|.=-| .+.+-..+ +.-.++.++.- +++..=|++...+..|
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G- 104 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYG- 104 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhh-
Confidence 567788888876554 89999997433 12222233 33444444432 3333337888888886
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
+++|++.|++.|.|.+=|-| +|.++..++.+.++++|+...+=+.. .
T Consensus 105 --~e~F~~~~~~aGvdG~IipD----LP~eE~~~~~~~~~~~Gl~~I~lvaP---~------------------------ 151 (252)
T 3tha_A 105 --LEKFVKKAKSLGICALIVPE----LSFEESDDLIKECERYNIALITLVSV---T------------------------ 151 (252)
T ss_dssp --HHHHHHHHHHTTEEEEECTT----CCGGGCHHHHHHHHHTTCEECEEEET---T------------------------
T ss_pred --HHHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHHHHHcCCeEEEEeCC---C------------------------
Confidence 89999999999999999887 88889999999999999986654422 0
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEecc-ccccCCCC
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSD-DVCKHADS 215 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEar-GI~d~~G~ 215 (289)
+++++++. -.+.+..+|-+-++ |++-....
T Consensus 152 --t~~eRi~~---ia~~a~gFiY~Vs~~GvTG~~~~ 182 (252)
T 3tha_A 152 --TPKERVKK---LVKHAKGFIYLLASIGITGTKSV 182 (252)
T ss_dssp --SCHHHHHH---HHTTCCSCEEEECCSCSSSCSHH
T ss_pred --CcHHHHHH---HHHhCCCeEEEEecCCCCCcccC
Confidence 13344444 44566677777776 77765533
No 43
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.84 E-value=0.48 Score=42.92 Aligned_cols=98 Identities=10% Similarity=0.070 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCEEEecCCcc--------cCChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccc
Q 022982 105 EYVEDCKQVGFDTIELNVGSL--------EIPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVA 172 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti--------~i~~~~----r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~ 172 (289)
+-++.+.+.|++.|-|+...- ..+.++ -.+.|+.+++.|++|-.+++.-++. .|.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~------e~~------- 149 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVEC------PYD------- 149 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEE------TTT-------
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecC------CcC-------
Confidence 456788889999999986332 344443 2456899999999987777653311 110
Q ss_pred cCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 173 RAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
+..|++++.+.++...++||+.|-+= |..|-..+..+.++++.
T Consensus 150 -------~~~~~~~~~~~~~~~~~~G~d~i~l~-----Dt~G~~~P~~~~~lv~~ 192 (295)
T 1ydn_A 150 -------GPVTPQAVASVTEQLFSLGCHEVSLG-----DTIGRGTPDTVAAMLDA 192 (295)
T ss_dssp -------EECCHHHHHHHHHHHHHHTCSEEEEE-----ETTSCCCHHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHhcCCCEEEec-----CCCCCcCHHHHHHHHHH
Confidence 01269999999999999999987654 66676666666666643
No 44
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=92.83 E-value=0.84 Score=39.45 Aligned_cols=128 Identities=11% Similarity=0.138 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCC-CCCCccccccccccccC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRDRAFGAYVARA 174 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~-evg~~~d~~~~~~~~~~ 174 (289)
.+++.++.++++||++||+.... ..++.++..++-+.+++.|+.. +.+-.+.. ...+ |++
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~---~~~h~~~~~~l~s--~~~-------- 81 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLP---AVIHASYLVNLGA--EGE-------- 81 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCC---EEEECCTTCCTTC--SST--------
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCce---EEEecCcccCCCC--CHH--------
Confidence 58889999999999999995532 2455778888889999999932 22211110 0111 111
Q ss_pred CCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc----cCCCceEEecC---------Cch
Q 022982 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR----LGLEKTMFEAT---------NPR 241 (289)
Q Consensus 175 ~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~----l~~eklifEAP---------~k~ 241 (289)
.+ ..+.+.+.+.++..-+.||..|.+-.-.. +. +.-.+-+.++++. .|+ +|.+|.- ...
T Consensus 82 ~r----~~~~~~~~~~i~~a~~lGa~~vv~h~g~~-~~--~~~~~~l~~l~~~a~~~~gv-~l~lEn~~~~~~~~~~~~~ 153 (270)
T 3aam_A 82 LW----EKSVASLADDLEKAALLGVEYVVVHPGSG-RP--ERVKEGALKALRLAGVRSRP-VLLVENTAGGGEKVGARFE 153 (270)
T ss_dssp HH----HHHHHHHHHHHHHHHHHTCCEEEECCCBS-CH--HHHHHHHHHHHHHHTCCSSS-EEEEECCCCCTTBSCCSHH
T ss_pred HH----HHHHHHHHHHHHHHHHcCCCEEEECCCCC-CH--HHHHHHHHHHHHhhcccCCC-EEEEecCCCCCCccCCCHH
Confidence 01 12356666777777788999998865322 11 1122333444433 343 7888875 344
Q ss_pred hHHHHHHHh
Q 022982 242 TSEWFIRRY 250 (289)
Q Consensus 242 qQ~~~I~~f 250 (289)
+-..+++..
T Consensus 154 ~~~~l~~~v 162 (270)
T 3aam_A 154 ELAWLVADT 162 (270)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHhC
Confidence 556777776
No 45
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=92.68 E-value=0.42 Score=42.98 Aligned_cols=88 Identities=11% Similarity=0.106 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCC------cccC-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG------SLEI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG------ti~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~ 170 (289)
.+++.++.++++||++||+... ...+ +.++..++-+.+++.|+++.+ ++........ ++
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~-~~~~~~~~~~----~~----- 106 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISS-SHLTPSLREY----TK----- 106 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEE-EBCCCSCCCC----CG-----
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEE-eecccccccc----ch-----
Confidence 6999999999999999999853 1233 223677888889999999743 2221111100 00
Q ss_pred cccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
..+ ....+.+-+.++..-+.||.+|++-+
T Consensus 107 ---~~~----~~~~~~~~~~i~~A~~lG~~~v~~~~ 135 (305)
T 3obe_A 107 ---ENM----PKFDEFWKKATDIHAELGVSCMVQPS 135 (305)
T ss_dssp ---GGH----HHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred ---hhH----HHHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 000 01134444555555578999999853
No 46
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=92.57 E-value=1.1 Score=43.96 Aligned_cols=149 Identities=11% Similarity=0.149 Sum_probs=105.6
Q ss_pred HHHHHhh-cccccEEEecCccccccChhHHHHHHHHHHhCCceec-----CCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 44 EDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 44 ~DlLe~a-g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~-----~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
+..++.+ ..=+|.+-+-..++-+ +.+++-|+.++++|..+. ..+. ..+++.+-+..+.+.+.|.+.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~~-----~~~~e~~~~~a~~l~~~Gad~ 174 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDV---RNMQQALQAVKKMGAHAQGTLCYTTSP-----VHNLQTWVDVAQQLAELGVDS 174 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCCT-----TCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHH---HHHHHHHHHHHHCCCEEEEEEEeeeCC-----CCCHHHHHHHHHHHHHCCCCE
Confidence 3344333 3448888877665555 579999999999999762 2221 124456677777888999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHc
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEA 197 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeA 197 (289)
|=|.|-.--+.+.+-.++|+.+++. +. -.+++.+ ..+ ...-+-.+...++|
T Consensus 175 I~l~DT~G~~~P~~v~~lv~~l~~~-~~--~~i~~H~-Hnd-------------------------~GlAvAN~laAv~A 225 (464)
T 2nx9_A 175 IALKDMAGILTPYAAEELVSTLKKQ-VD--VELHLHC-HST-------------------------AGLADMTLLKAIEA 225 (464)
T ss_dssp EEEEETTSCCCHHHHHHHHHHHHHH-CC--SCEEEEE-CCT-------------------------TSCHHHHHHHHHHT
T ss_pred EEEcCCCCCcCHHHHHHHHHHHHHh-cC--CeEEEEE-CCC-------------------------CChHHHHHHHHHHh
Confidence 9999988888899989999999885 22 2355533 111 12236777788999
Q ss_pred cCcEEEEecc--ccccCCCCccHHHHHHHHhccCCC
Q 022982 198 GADMIMIDSD--DVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 198 GA~~ViiEar--GI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
||+.| ++- |+=...||...+.+-..+...+.+
T Consensus 226 Ga~~V--D~ti~g~gertGN~~lE~lv~~L~~~g~~ 259 (464)
T 2nx9_A 226 GVDRV--DTAISSMSGTYGHPATESLVATLQGTGYD 259 (464)
T ss_dssp TCSEE--EEBCGGGCSTTSCCBHHHHHHHHTTSTTC
T ss_pred CCCEE--EEeccccCCCCcCHHHHHHHHHHHhcCCC
Confidence 99955 654 888889999988887777766543
No 47
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.53 E-value=0.2 Score=46.92 Aligned_cols=121 Identities=19% Similarity=0.330 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhC-----CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHHH
Q 022982 71 FIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLVK 140 (289)
Q Consensus 71 ~l~eKI~l~~~~-----gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~lI~~~~ 140 (289)
.+.|.|+-.++. +|++++..|.+--+. .+...++.+.+.+.|+|+|+||+|... .++.-..++++.++
T Consensus 196 ~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~--~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik 273 (340)
T 3gr7_A 196 FLGEVIDAVREVWDGPLFVRISASDYHPDGLT--AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIR 273 (340)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC--GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEeccccccCCCCC--HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHH
Confidence 455666666543 446677554432111 235667788888899999999988642 12333456777777
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHH
Q 022982 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRAD 219 (289)
Q Consensus 141 ~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d 219 (289)
+. +. +|=++. | .+. | .+.+++.|++| ||.|++ +|.+.. +++
T Consensus 274 ~~-~~-iPVi~~-------G--------gI~-----------s----~e~a~~~L~~G~aD~V~i-GR~~la-----nPd 315 (340)
T 3gr7_A 274 RE-AD-IPTGAV-------G--------LIT-----------S----GWQAEEILQNGRADLVFL-GRELLR-----NPY 315 (340)
T ss_dssp HH-TT-CCEEEE-------S--------SCC-----------C----HHHHHHHHHTTSCSEEEE-CHHHHH-----CTT
T ss_pred HH-cC-CcEEee-------C--------CCC-----------C----HHHHHHHHHCCCeeEEEe-cHHHHh-----Cch
Confidence 73 11 221221 1 111 1 46778889999 999998 465443 257
Q ss_pred HHHHHHhccCCC
Q 022982 220 IIAKVIGRLGLE 231 (289)
Q Consensus 220 ~v~~ii~~l~~e 231 (289)
++.++.+.++.+
T Consensus 316 l~~ki~~~l~~~ 327 (340)
T 3gr7_A 316 WPYAAARELGAK 327 (340)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHCCCC
Confidence 889999888854
No 48
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.40 E-value=0.45 Score=42.18 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=59.6
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
++++.+.|.|.|-+... .-..++...++++.+++.|+.+..++.-
T Consensus 94 i~~~~~~Gad~V~l~~~-~~~~p~~l~~~i~~~~~~g~~v~~~v~t---------------------------------- 138 (232)
T 3igs_A 94 VDALAQAGAAIIAVDGT-ARQRPVAVEALLARIHHHHLLTMADCSS---------------------------------- 138 (232)
T ss_dssp HHHHHHHTCSEEEEECC-SSCCSSCHHHHHHHHHHTTCEEEEECCS----------------------------------
T ss_pred HHHHHHcCCCEEEECcc-ccCCHHHHHHHHHHHHHCCCEEEEeCCC----------------------------------
Confidence 56789999999977544 4344467778999999988776654321
Q ss_pred HHHHHHHHHHccCcEEEEeccccccC--CCCccHHHHHHHHhc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIGR 227 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~--~G~~r~d~v~~ii~~ 227 (289)
.+.+++..++||++|.+-.+|.... ......+++.++.+.
T Consensus 139 -~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~ 180 (232)
T 3igs_A 139 -VDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA 180 (232)
T ss_dssp -HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT
T ss_pred -HHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc
Confidence 4667788899999998877776442 223456777777653
No 49
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=92.37 E-value=0.79 Score=42.67 Aligned_cols=113 Identities=13% Similarity=0.179 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--------------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG--------------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG--------------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~ 167 (289)
..+.|++.+|+.||..| ++=- --.|..++-.++|+++++.||...+=+-
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~---------------- 171 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVF---------------- 171 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEEC----------------
T ss_pred CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecC----------------
Confidence 58999999999999999 8776 3457778888999999999887444110
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc----ccccCCCCccH----HHHHHHH---hccCCC-ceEE
Q 022982 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD----DVCKHADSLRA----DIIAKVI---GRLGLE-KTMF 235 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar----GI~d~~G~~r~----d~v~~ii---~~l~~e-klif 235 (289)
+ .++++.-.+||||.|.+|-- |+....-.+.. +.++++. .++.++ .+|.
T Consensus 172 ---------------~----~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc 232 (286)
T 2p10_A 172 ---------------S----PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILS 232 (286)
T ss_dssp ---------------S----HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred ---------------C----HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEe
Confidence 1 56777788999999999986 55444333332 2344444 445444 4556
Q ss_pred ec-CC-chhHHHHHHHh
Q 022982 236 EA-TN-PRTSEWFIRRY 250 (289)
Q Consensus 236 EA-P~-k~qQ~~~I~~f 250 (289)
-| |- ..+-+.++.+.
T Consensus 233 ~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 233 HGGPIANPEDARFILDS 249 (286)
T ss_dssp ESTTCCSHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHhc
Confidence 66 53 23345555555
No 50
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=92.33 E-value=0.7 Score=45.34 Aligned_cols=110 Identities=13% Similarity=0.147 Sum_probs=84.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
+.+++..|-|+|=+.... ++.++..++++.+++.|+.++-|+.-
T Consensus 123 i~ea~~~GAD~ILLi~a~--l~~~~l~~l~~~a~~lgm~~LvEvh~---------------------------------- 166 (452)
T 1pii_A 123 IYLARYYQADACLLMLSV--LDDDQYRQLAAVAHSLEMGVLTEVSN---------------------------------- 166 (452)
T ss_dssp HHHHHHTTCSEEEEETTT--CCHHHHHHHHHHHHHTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEEccc--CCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 445899999999998885 66788999999999999999988765
Q ss_pred HHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCC-ceEEecCC-chhHHHHHHHhCCCccc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATN-PRTSEWFIRRYGPKVNL 256 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e-klifEAP~-k~qQ~~~I~~fG~~VNL 256 (289)
.+++++.+++||+.|-|+-|++-. -++.-+...+++..+|.+ -+|-|+=- -.++...+... .+-=|
T Consensus 167 -~eE~~~A~~lga~iIGinnr~L~t--~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avL 234 (452)
T 1pii_A 167 -EEEQERAIALGAKVVGINNRDLRD--LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFL 234 (452)
T ss_dssp -HHHHHHHHHTTCSEEEEESEETTT--TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEE
T ss_pred -HHHHHHHHHCCCCEEEEeCCCCCC--CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEE
Confidence 467788999999999999998744 355577778888888755 46777763 34556666655 44333
No 51
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=92.32 E-value=0.57 Score=40.91 Aligned_cols=146 Identities=14% Similarity=0.201 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+++.++.++++||+.||+....+ .++.++..++-+.+++.|+++..-.+.... .... ..|++. +
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~-~~l~-~~d~~~--------r---- 83 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAE-QNLS-SPDPDI--------R---- 83 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGG-GCTT-CSCHHH--------H----
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCC-cCCC-CCCHHH--------H----
Confidence 689999999999999999997643 567888889999999999997652221000 0000 011100 0
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEec-ccc---ccCCCCccHH-------HHH---HHHhccCCCceEEecC--------
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDS-DDV---CKHADSLRAD-------IIA---KVIGRLGLEKTMFEAT-------- 238 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEa-rGI---~d~~G~~r~d-------~v~---~ii~~l~~eklifEAP-------- 238 (289)
....+.+.+.++..-+.||..|.+-- -|. +.. +.-+.+ .+. +.++..|+ +|.+|.-
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lEn~~~~~~~~~ 161 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTK-TIDKKGDWERSVESVREVAKVAEACGV-DFCLEVLNRFENYLI 161 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTS-CCCHHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCCTTTCSSC
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCcccCccc
Confidence 01234455555556678999997521 111 111 111111 122 22334454 5888853
Q ss_pred -CchhHHHHHHHhCC-CcccccCCCCc
Q 022982 239 -NPRTSEWFIRRYGP-KVNLFVDHSQV 263 (289)
Q Consensus 239 -~k~qQ~~~I~~fG~-~VNLgI~~~eV 263 (289)
+..+-..+++..++ +|-+.+|..+.
T Consensus 162 ~~~~~~~~l~~~v~~~~vg~~~D~~h~ 188 (294)
T 3vni_A 162 NTAQEGVDFVKQVDHNNVKVMLDTFHM 188 (294)
T ss_dssp CSHHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred CCHHHHHHHHHHcCCCCEEEEEEhhhh
Confidence 34567789999984 44443555443
No 52
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.15 E-value=0.74 Score=42.93 Aligned_cols=164 Identities=13% Similarity=0.122 Sum_probs=110.1
Q ss_pred ceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHH
Q 022982 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKE 105 (289)
Q Consensus 26 lT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~ 105 (289)
+.++..|+.. -.+.++...++ -+|.+-+.. .+..-+..++-++.++++|+.+... +|.+....++.+.+
T Consensus 85 i~~l~~p~~~---~~~~i~~a~~a---Gvd~v~I~~---~~s~~~~~~~~i~~ak~~G~~v~~~--~~~a~~~~~e~~~~ 153 (345)
T 1nvm_A 85 IATLLLPGIG---SVHDLKNAYQA---GARVVRVAT---HCTEADVSKQHIEYARNLGMDTVGF--LMMSHMIPAEKLAE 153 (345)
T ss_dssp EEEEECBTTB---CHHHHHHHHHH---TCCEEEEEE---ETTCGGGGHHHHHHHHHHTCEEEEE--EESTTSSCHHHHHH
T ss_pred EEEEecCCcc---cHHHHHHHHhC---CcCEEEEEE---eccHHHHHHHHHHHHHHCCCEEEEE--EEeCCCCCHHHHHH
Confidence 4444456551 13344444443 477776652 2333367899999999999976543 12233344557888
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHH
Q 022982 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~ 185 (289)
..+.+.+.|.+.|=+.|-+-.+.+++-.++|+.++++ +...-.+++.+. . | ..
T Consensus 154 ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~pi~~H~H-n------~-------------------~G 206 (345)
T 1nvm_A 154 QGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAV-LKPETQVGMHAH-H------N-------------------LS 206 (345)
T ss_dssp HHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHH-SCTTSEEEEECB-C------T-------------------TS
T ss_pred HHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHh-cCCCceEEEEEC-C------C-------------------cc
Confidence 8888999999999999988888899999999999985 110123555331 1 1 22
Q ss_pred HHHHHHHHHHHccCcEEEEecc--ccccCCCCccHHHHHHHHhccC
Q 022982 186 LLIRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 186 ~~I~~~~~dLeAGA~~ViiEar--GI~d~~G~~r~d~v~~ii~~l~ 229 (289)
.-+..+...++|||+. |++- |+=...||...+.+-..+...|
T Consensus 207 ~avAn~laA~~aGa~~--vd~tv~GlG~~aGN~~le~lv~~L~~~g 250 (345)
T 1nvm_A 207 LGVANSIVAVEEGCDR--VDASLAGMGAGAGNAPLEVFIAVAERLG 250 (345)
T ss_dssp CHHHHHHHHHHTTCCE--EEEBGGGCSSTTCBCBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCE--EEecchhccCCccCcCHHHHHHHHHhcC
Confidence 2377888899999986 5764 8888899999887776666544
No 53
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=92.11 E-value=4.7 Score=37.21 Aligned_cols=145 Identities=12% Similarity=0.109 Sum_probs=102.0
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. +=++.-=+|+ |
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv-------g---------------- 99 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA-------G---------------- 99 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC-------C----------------
Confidence 36888899999999999965443 3489999999999999884 1011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||-|++=.- -||+. .-++..+.+.+++++
T Consensus 100 ----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 175 (315)
T 3si9_A 100 ----SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRD 175 (315)
T ss_dssp ----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhh
Confidence 114788899999999999999998662 15653 346778889988865
Q ss_pred cCCCce--EEec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKT--MFEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~ekl--ifEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
.| +| |=|+ .+-.+...+++..++++.+.- -+|-+.+++|..|--|
T Consensus 176 ~p--nIvgiKdssgd~~~~~~l~~~~~~~f~v~~-G~d~~~l~~l~~G~~G 223 (315)
T 3si9_A 176 FK--NIIGVKDATGKIERASEQREKCGKDFVQLS-GDDCTALGFNAHGGVG 223 (315)
T ss_dssp CT--TEEEEEECSCCTHHHHHHHHHHCSSSEEEE-SCGGGHHHHHHTTCCE
T ss_pred CC--CEEEEEeCCCCHHHHHHHHHHcCCCeEEEe-cCHHHHHHHHHcCCCE
Confidence 65 33 2244 567777888999998877743 3455678889877544
No 54
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.10 E-value=0.48 Score=43.70 Aligned_cols=131 Identities=15% Similarity=0.229 Sum_probs=78.5
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC-CceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
.+...+..+|- ++++=.+ .++.+.+++.++.+++. +.++ | .++ +... .++++++.|.+.|+|.|+
T Consensus 27 ~la~av~~aG~-lG~i~~~-----~~~~~~~~~~i~~i~~~~~~p~--gvnl~---~~~~--~~~~~~~~a~~~g~d~V~ 93 (332)
T 2z6i_A 27 DLAGAVSKAGG-LGIIGGG-----NAPKEVVKANIDKIKSLTDKPF--GVNIM---LLSP--FVEDIVDLVIEEGVKVVT 93 (332)
T ss_dssp HHHHHHHHHTS-BEEEECT-----TCCHHHHHHHHHHHHHHCCSCE--EEEEC---TTST--THHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCC-cEEeCCC-----CCCHHHHHHHHHHHHHhcCCCE--EEEec---CCCC--CHHHHHHHHHHCCCCEEE
Confidence 45555666664 6666222 23556678777777753 1111 2 111 0122 588999999999999999
Q ss_pred ecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccC
Q 022982 120 LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA 199 (289)
Q Consensus 120 ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA 199 (289)
++.|. | .++++.+++.|+++..-+ . + ++.++...++||
T Consensus 94 ~~~g~---p----~~~i~~l~~~g~~v~~~v-----~--------------------------~----~~~a~~~~~~Ga 131 (332)
T 2z6i_A 94 TGAGN---P----SKYMERFHEAGIIVIPVV-----P--------------------------S----VALAKRMEKIGA 131 (332)
T ss_dssp ECSSC---G----GGTHHHHHHTTCEEEEEE-----S--------------------------S----HHHHHHHHHTTC
T ss_pred ECCCC---h----HHHHHHHHHcCCeEEEEe-----C--------------------------C----HHHHHHHHHcCC
Confidence 99883 3 246677777777655221 0 1 345666778999
Q ss_pred cEEEEecc--ccccCCCCccHHHHHHHHhcc
Q 022982 200 DMIMIDSD--DVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 200 ~~ViiEar--GI~d~~G~~r~d~v~~ii~~l 228 (289)
|.|++++. |=... .....+++.++.+.+
T Consensus 132 D~i~v~g~~~GG~~g-~~~~~~ll~~i~~~~ 161 (332)
T 2z6i_A 132 DAVIAEGMEAGGHIG-KLTTMTLVRQVATAI 161 (332)
T ss_dssp SCEEEECTTSSEECC-SSCHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCCC-CccHHHHHHHHHHhc
Confidence 99999875 21111 123346666666544
No 55
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.09 E-value=1.4 Score=39.83 Aligned_cols=49 Identities=10% Similarity=-0.006 Sum_probs=35.7
Q ss_pred ChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 022982 68 PKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (289)
Q Consensus 68 p~~~l~eKI~l~~~~-gV~v~----~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (289)
+.+.+.+.++-.++. ++++. ++ | ....+.++.+.|.+.|.|.|-+++.+
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~~-~-------~~~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPPY-F-------DLVHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCC-C-------SHHHHHHHHHHHTTSCCCEEEECCCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCC-C-------CHHHHHHHHHHHHHcCCcEEEecCCC
Confidence 666788888888876 55443 33 2 11256778889999999999999986
No 56
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.90 E-value=1.7 Score=39.57 Aligned_cols=102 Identities=16% Similarity=0.288 Sum_probs=66.9
Q ss_pred hhHHHHHHHhhc-ccccEEEecCcc-ccccChhH-----------------HHHHHHHHHhC--CceecCCcHHHHHHHh
Q 022982 40 HNVLEDIFESMG-QFVDGLKFSGGS-HSLMPKPF-----------------IEEVVKRAHQH--DVYVSTGDWAEHLIRN 98 (289)
Q Consensus 40 ~~~~~DlLe~ag-~yID~lKfg~GT-s~l~p~~~-----------------l~eKI~l~~~~--gV~v~~GtlfE~a~~q 98 (289)
+..+.+++...- .=+|++=+|.=- -.+++-.. +-+.++-.|+. ++++..=|++.-.+..
T Consensus 31 ~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~ 110 (267)
T 3vnd_A 31 PELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFAN 110 (267)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHh
Confidence 455555555443 348999998211 11222222 22344444543 3443322677777777
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
| +++|++.|++.|+|.+=|. ++|.++..++++.++++|+++.+
T Consensus 111 g---~e~f~~~~~~aGvdgvii~----Dlp~ee~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 111 G---IDEFYTKAQAAGVDSVLIA----DVPVEESAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp C---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEC
T ss_pred h---HHHHHHHHHHcCCCEEEeC----CCCHhhHHHHHHHHHHcCCeEEE
Confidence 5 8999999999999999996 56778888999999999988655
No 57
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=91.78 E-value=2.4 Score=38.81 Aligned_cols=111 Identities=11% Similarity=0.107 Sum_probs=86.1
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
+.+++..|-|+|=+..- .++.++..++++.+++.|+.++.|+.-
T Consensus 135 i~ea~~~GAD~VlLi~a--~L~~~~l~~l~~~a~~lGl~~lvevh~---------------------------------- 178 (272)
T 3tsm_A 135 VYEARSWGADCILIIMA--SVDDDLAKELEDTAFALGMDALIEVHD---------------------------------- 178 (272)
T ss_dssp HHHHHHTTCSEEEEETT--TSCHHHHHHHHHHHHHTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEccc--ccCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 66789999999998766 457888899999999999998887742
Q ss_pred HHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCC-ceEEecCC-chhHHHHHHHhCCCccc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATN-PRTSEWFIRRYGPKVNL 256 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e-klifEAP~-k~qQ~~~I~~fG~~VNL 256 (289)
.+++++.+++||++|=+-.|.+..- .+.-+...+++..++.+ -+|-|.=- ...+...+...|.+-=|
T Consensus 179 -~eEl~~A~~~ga~iIGinnr~l~t~--~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvL 247 (272)
T 3tsm_A 179 -EAEMERALKLSSRLLGVNNRNLRSF--EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFL 247 (272)
T ss_dssp -HHHHHHHTTSCCSEEEEECBCTTTC--CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEE
T ss_pred -HHHHHHHHhcCCCEEEECCCCCccC--CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 3566788899999999988865332 34566777888888754 46777764 56788888888887655
No 58
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=91.72 E-value=3.9 Score=37.65 Aligned_cols=133 Identities=18% Similarity=0.206 Sum_probs=81.9
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCC-ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHD-VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~g-V~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (289)
.+......+| ++.++= + ..++.+.+++.|+.+++.- .++--+.+. ... .++++++.+.+.|.+.|.+
T Consensus 41 ~la~av~~aG-glG~i~----~-~~~~~~~l~~~i~~i~~~~~~p~gVnl~~----~~~--~~~~~~~~~~~~g~d~V~l 108 (326)
T 3bo9_A 41 TLAAAVSEAG-GLGIIG----S-GAMKPDDLRKAISELRQKTDKPFGVNIIL----VSP--WADDLVKVCIEEKVPVVTF 108 (326)
T ss_dssp HHHHHHHHTT-SBEEEE----C-TTCCHHHHHHHHHHHHTTCSSCEEEEEET----TST--THHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCC-CcEEeC----C-CCCCHHHHHHHHHHHHHhcCCCEEEEEec----cCC--CHHHHHHHHHHCCCCEEEE
Confidence 4555556666 666662 1 2246677888888888752 222112111 122 6789999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCc
Q 022982 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (289)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~ 200 (289)
+-|. | .++++.+++.|.++.+.+. + .+.+++..++|||
T Consensus 109 ~~g~---p----~~~~~~l~~~g~~v~~~v~-------------------------------s----~~~a~~a~~~GaD 146 (326)
T 3bo9_A 109 GAGN---P----TKYIRELKENGTKVIPVVA-------------------------------S----DSLARMVERAGAD 146 (326)
T ss_dssp ESSC---C----HHHHHHHHHTTCEEEEEES-------------------------------S----HHHHHHHHHTTCS
T ss_pred CCCC---c----HHHHHHHHHcCCcEEEEcC-------------------------------C----HHHHHHHHHcCCC
Confidence 8773 4 2567788888777654210 1 3556667899999
Q ss_pred EEEEeccccccCCC-CccHHHHHHHHhcc
Q 022982 201 MIMIDSDDVCKHAD-SLRADIIAKVIGRL 228 (289)
Q Consensus 201 ~ViiEarGI~d~~G-~~r~d~v~~ii~~l 228 (289)
.|++++.+---..| ....+++.++.+.+
T Consensus 147 ~i~v~g~~~GG~~G~~~~~~ll~~i~~~~ 175 (326)
T 3bo9_A 147 AVIAEGMESGGHIGEVTTFVLVNKVSRSV 175 (326)
T ss_dssp CEEEECTTSSEECCSSCHHHHHHHHHHHC
T ss_pred EEEEECCCCCccCCCccHHHHHHHHHHHc
Confidence 99999852100112 23445666666544
No 59
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=91.70 E-value=0.37 Score=44.99 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=90.8
Q ss_pred HHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc--cc
Q 022982 71 FIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA--KP 148 (289)
Q Consensus 71 ~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v--~~ 148 (289)
.+++-|+.++++|..|..|- |.+-.-+|+.+-+..+.+.+.|.+.|-+.|-.--+.+.+-.++|+.+++. +.- .-
T Consensus 123 ~~~~~v~~a~~~g~~v~f~~--~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~~~ 199 (325)
T 3eeg_A 123 MAVAAVKQAKKVVHEVEFFC--EDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDN-VSNIDKA 199 (325)
T ss_dssp TTHHHHHHHHTTSSEEEEEE--ETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHH-CSCGGGS
T ss_pred HHHHHHHHHHHCCCEEEEEc--cccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHh-CCCCCce
Confidence 45688999999999887652 22233455567788888889999999999999999999999999999884 110 01
Q ss_pred eeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc--ccccCCCCccHHHHHHHHh
Q 022982 149 KFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 149 E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar--GI~d~~G~~r~d~v~~ii~ 226 (289)
.+++.+. . |...-+-.+...++|||+.| ++- |+=...||.-++.+-..+.
T Consensus 200 ~i~~H~H-n-------------------------d~GlA~AN~laA~~aGa~~v--d~tv~GlGer~GN~~lE~vv~~L~ 251 (325)
T 3eeg_A 200 ILSAHCH-N-------------------------DLGLATANSLAALQNGARQV--ECTINGIGERAGNTALEEVVMAME 251 (325)
T ss_dssp EEEECBC-C-------------------------TTSCHHHHHHHHHHHTCCEE--EEBGGGCCSTTCCCBHHHHHHHHH
T ss_pred EEEEEeC-C-------------------------CCCHHHHHHHHHHHhCCCEE--EEecccccccccchhHHHHHHHHH
Confidence 3444321 1 12223677888999999974 664 8888999999887766654
No 60
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=91.64 E-value=0.38 Score=41.26 Aligned_cols=140 Identities=17% Similarity=0.277 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHcCCCEEEec-CCccc--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELN-VGSLE--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS-dGti~--i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+++.++.++++||+.||+. ..... ++..+..++.+.+++.|+++.+ ++.-.+.. + .|++ .+
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~---~-~~~~--------~~-- 79 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLA-LNALVFFN---N-RDEK--------GH-- 79 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEE-EEEEECCS---S-CCHH--------HH--
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeee-eccccccc---c-CCHH--------HH--
Confidence 68899999999999999998 54331 2335566788888999998754 43321111 0 1110 00
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccH-------HH---HHHHHhccCCCceEEecC--------Cc
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DI---IAKVIGRLGLEKTMFEAT--------NP 240 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~-------d~---v~~ii~~l~~eklifEAP--------~k 240 (289)
....+.+.+.++..-+.||..|.+=+ |.... +.-+. +. +.++++..|+ +|.+|.- +.
T Consensus 80 --~~~~~~~~~~i~~a~~lG~~~v~~~~-g~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~ 154 (278)
T 1i60_A 80 --NEIITEFKGMMETCKTLGVKYVVAVP-LVTEQ-KIVKEEIKKSSVDVLTELSDIAEPYGV-KIALEFVGHPQCTVNTF 154 (278)
T ss_dssp --HHHHHHHHHHHHHHHHHTCCEEEEEC-CBCSS-CCCHHHHHHHHHHHHHHHHHHHGGGTC-EEEEECCCCTTBSSCSH
T ss_pred --HHHHHHHHHHHHHHHHcCCCEEEEec-CCCCC-CCCHHHHHHHHHHHHHHHHHHHHhcCC-EEEEEecCCccchhcCH
Confidence 01244555566666678999998843 21111 11011 11 2223333454 5777754 34
Q ss_pred hhHHHHHHHhCC-CcccccCCC
Q 022982 241 RTSEWFIRRYGP-KVNLFVDHS 261 (289)
Q Consensus 241 ~qQ~~~I~~fG~-~VNLgI~~~ 261 (289)
.+-..+++..|+ +|-+.+|..
T Consensus 155 ~~~~~l~~~~~~~~~g~~~D~~ 176 (278)
T 1i60_A 155 EQAYEIVNTVNRDNVGLVLDSF 176 (278)
T ss_dssp HHHHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHHHhCCCCeeEEEEeE
Confidence 567788999985 554434443
No 61
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=91.61 E-value=2.1 Score=38.34 Aligned_cols=112 Identities=16% Similarity=0.212 Sum_probs=72.5
Q ss_pred ceeEecCCCCCCCchhHHHHHHHhhccc-ccEEEecCccc-cccChhHHH-----------------HHHHHHHhC--Cc
Q 022982 26 VTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DV 84 (289)
Q Consensus 26 lT~V~DkGl~~~~g~~~~~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~--gV 84 (289)
+++|. +|++ .+....++++..-+. +|.+.+|.=-+ .+++-..++ +-++-.+++ ++
T Consensus 20 i~~i~-~g~p---~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 20 VSYLM-VGYP---DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp EEEEE-TTSS---CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred EEEec-CCCC---ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 44443 6663 445566666655555 99999986322 122222333 334444544 45
Q ss_pred eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 85 ~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
++..=|..-.++..| +++|++.|++.|+|.+=+. ++|.++-.++++.++++|+.+.+
T Consensus 96 Pi~~m~y~n~v~~~g---~~~f~~~~~~aG~dgvii~----dl~~ee~~~~~~~~~~~gl~~i~ 152 (262)
T 2ekc_A 96 PFLLMTYYNPIFRIG---LEKFCRLSREKGIDGFIVP----DLPPEEAEELKAVMKKYVLSFVP 152 (262)
T ss_dssp CEEEECCHHHHHHHC---HHHHHHHHHHTTCCEEECT----TCCHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEecCcHHHHhh---HHHHHHHHHHcCCCEEEEC----CCCHHHHHHHHHHHHHcCCcEEE
Confidence 443214445555554 7999999999999988886 56778889999999999988654
No 62
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=91.39 E-value=1.1 Score=41.38 Aligned_cols=161 Identities=17% Similarity=0.118 Sum_probs=106.7
Q ss_pred CCceecCCcHH--HHHHHhCCchHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeec
Q 022982 82 HDVYVSTGDWA--EHLIRNGPSAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMF 154 (289)
Q Consensus 82 ~gV~v~~Gtlf--E~a~~qg~~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~ 154 (289)
.||.+..=|.| +- -.=+.+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 13 ~Gv~~a~vTPF~~~d-g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv-- 88 (314)
T 3d0c_A 13 STISGINIVPFLEGT-REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RATVVAGI-- 88 (314)
T ss_dssp SSEEECCCCCBCTTT-CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEE--
T ss_pred CceEEeeeccccCCC-CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCeEEecC--
Confidence 46655555544 21 0112236888999999999999987543 4489999999999999873 1 11111122
Q ss_pred CCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------cc
Q 022982 155 NKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DV 209 (289)
Q Consensus 155 ~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI 209 (289)
| . +..+.|++++..-++|||.|++=.- -|
T Consensus 89 -----g--------------------~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 89 -----G--------------------Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSII 142 (314)
T ss_dssp -----C--------------------S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEE
T ss_pred -----C--------------------c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 1 1 3677899999999999999998652 26
Q ss_pred ccCCCCccHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCC--CcccccCCCCchhhhhhhcccCC
Q 022982 210 CKHADSLRADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGP--KVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 210 ~d~~G~~r~d~v~~ii~~l~~eklif--EA-P~k~qQ~~~I~~fG~--~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
|+..|.+..+.+.++++ ..+|+- |+ .+-.+...+++..++ ++.+.--.+++..+++|..|--|
T Consensus 143 Yn~tg~l~~~~~~~La~---~pnIvgiKdssgd~~~~~~~~~~~~~~~~f~v~~G~d~~~~~~~l~~G~~G 210 (314)
T 3d0c_A 143 YFKDAHLSDDVIKELAP---LDKLVGIKYAINDIQRVTQVMRAVPKSSNVAFICGTAEKWAPFFYHAGAVG 210 (314)
T ss_dssp EECCTTSCTHHHHHHTT---CTTEEEEEECCCCHHHHHHHHHHSCGGGCCEEEETTHHHHHHHHHHHTCCE
T ss_pred EeCCCCcCHHHHHHHHc---CCCEEEEEeCCCCHHHHHHHHHhcCCCCCEEEEEeCcHHHHHHHHHcCCCE
Confidence 77556566788888863 345542 55 466677778888876 66664334443788899877444
No 63
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=91.37 E-value=1.7 Score=40.07 Aligned_cols=120 Identities=19% Similarity=0.208 Sum_probs=80.0
Q ss_pred HHHHHHHHcCCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccC
Q 022982 105 EYVEDCKQVGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~ 174 (289)
+-.+..-+.|..+|-|=|+.. -+|.++.++-|+.+++.+- -+.|-++- ..|. .
T Consensus 101 ~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~--~~~~~i~a-------Rtda-a------- 163 (287)
T 3b8i_A 101 RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARV--DPALTIIA-------RTNA-E------- 163 (287)
T ss_dssp HHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCC--STTSEEEE-------EEET-T-------
T ss_pred HHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCC--CCCcEEEE-------echh-h-------
Confidence 334444458999999999864 3788899999999999865 23344421 1111 0
Q ss_pred CCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCC
Q 022982 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPK 253 (289)
Q Consensus 175 ~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP-~k~qQ~~~I~~fG~~ 253 (289)
....++.|++++...+||||.|.+|+- ...+++.+|.+.++.--+|.|-- .+..-..=+...|
T Consensus 164 ------~~gl~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL~~lG-- 227 (287)
T 3b8i_A 164 ------LIDVDAVIQRTLAYQEAGADGICLVGV--------RDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLG-- 227 (287)
T ss_dssp ------TSCHHHHHHHHHHHHHTTCSEEEEECC--------CSHHHHHHHHTTCCSCEEEECTTCGGGCCHHHHHHTT--
T ss_pred ------hcCHHHHHHHHHHHHHcCCCEEEecCC--------CCHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHHHHcC--
Confidence 124789999999999999999999963 23688999999888444477741 1222223355566
Q ss_pred cccc
Q 022982 254 VNLF 257 (289)
Q Consensus 254 VNLg 257 (289)
||+-
T Consensus 228 v~~v 231 (287)
T 3b8i_A 228 VRVV 231 (287)
T ss_dssp EEEE
T ss_pred CcEE
Confidence 5554
No 64
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=91.28 E-value=0.83 Score=44.47 Aligned_cols=146 Identities=16% Similarity=0.220 Sum_probs=98.1
Q ss_pred hHHHHHHHhhcccccEEEecCccccccCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHH
Q 022982 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVED 109 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~ 109 (289)
..++..+++- +|.+-+-..||-.+.+ +.+.+-++.++++|+.|..+ +|.++..+++.+-+.++.
T Consensus 114 ~di~~A~~aG---~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~--~eda~r~d~~~~~~v~~~ 188 (423)
T 3ivs_A 114 DDARVAVETG---VDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFS--SEDSFRSDLVDLLSLYKA 188 (423)
T ss_dssp HHHHHHHHTT---CSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEE--EESGGGSCHHHHHHHHHH
T ss_pred hhHHHHHHcC---CCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEE--EccCcCCCHHHHHHHHHH
Confidence 3455555543 5566666666544322 34556789999999988754 233444555566777788
Q ss_pred HHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 110 CKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
+.+.|.+.|-+.|-.--+.+.+-.++|+.+++. + ...+++.+. . | ...-+-
T Consensus 189 ~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~-~--~~~i~~H~H-n------d-------------------~GlAvA 239 (423)
T 3ivs_A 189 VDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV-V--SCDIECHFH-N------D-------------------TGMAIA 239 (423)
T ss_dssp HHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH-C--SSEEEEEEB-C------T-------------------TSCHHH
T ss_pred HHHhCCCccccCCccCcCCHHHHHHHHHHHHhh-c--CCeEEEEEC-C------C-------------------CchHHH
Confidence 889999999999999888899989999999874 2 224555331 1 1 222367
Q ss_pred HHHHHHHccCcEEEEecc--ccccCCCCccHHHHH
Q 022982 190 RAERCLEAGADMIMIDSD--DVCKHADSLRADIIA 222 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEar--GI~d~~G~~r~d~v~ 222 (289)
.+...++|||+ .|++- |+=+..||...+.+-
T Consensus 240 N~laAv~aGa~--~vd~ti~GlGERaGNa~Le~vv 272 (423)
T 3ivs_A 240 NAYCALEAGAT--HIDTSILGIGERNGITPLGALL 272 (423)
T ss_dssp HHHHHHHTTCC--EEEEBGGGCSSTTCBCBHHHHH
T ss_pred HHHHHHHhCCC--EEEEecccccCcccchhHHHHH
Confidence 77889999999 55664 999999998876553
No 65
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=91.20 E-value=3.1 Score=38.13 Aligned_cols=130 Identities=20% Similarity=0.209 Sum_probs=96.2
Q ss_pred HHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 103 FKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 103 ~~~y-l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
+++| +.+++.+|=|+|=+-.. -++.++..++++.+++.||.|+-|+.-
T Consensus 114 id~yQI~eAr~~GADaILLI~a--~L~~~~l~~l~~~A~~lGl~~LvEVh~----------------------------- 162 (258)
T 4a29_A 114 VKESQIDDAYNLGADTVLLIVK--ILTERELESLLEYARSYGMEPLILIND----------------------------- 162 (258)
T ss_dssp CSHHHHHHHHHHTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCCCEEEESS-----------------------------
T ss_pred ccHHHHHHHHHcCCCeeehHHh--hcCHHHHHHHHHHHHHHhHHHHHhcch-----------------------------
Confidence 5555 67899999999976543 367888899999999999999998754
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCce-EEecC-CchhHHHHHHHhCCCccc-c-
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT-MFEAT-NPRTSEWFIRRYGPKVNL-F- 257 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekl-ifEAP-~k~qQ~~~I~~fG~~VNL-g- 257 (289)
-+++++.+++||+.|-|..|.+- +-++.-+.-.+++..+|.+.+ |-|.= ....+...++..|.+-=| |
T Consensus 163 ------~~El~rAl~~~a~iIGINNRnL~--tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGe 234 (258)
T 4a29_A 163 ------ENDLDIALRIGARFIGIMSRDFE--TGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISS 234 (258)
T ss_dssp ------HHHHHHHHHTTCSEEEECSBCTT--TCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECH
T ss_pred ------HHHHHHHhcCCCcEEEEeCCCcc--ccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECH
Confidence 35677889999999999888762 345567778889999987766 55665 345678889999988666 4
Q ss_pred --cCCCCchhhhhhhccc
Q 022982 258 --VDHSQVMDLECLRGRN 273 (289)
Q Consensus 258 --I~~~eVl~LE~LR~g~ 273 (289)
+...| ++..|..|.
T Consensus 235 almr~~d--~~~~Li~G~ 250 (258)
T 4a29_A 235 SLMRNPE--KIKELIEGS 250 (258)
T ss_dssp HHHHCTT--HHHHHHC--
T ss_pred HHhCCCc--HHHHHHcCc
Confidence 33333 445555444
No 66
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.17 E-value=6.1 Score=36.37 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=100.9
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+ |
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv-------g---------------- 100 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT-------G---------------- 100 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------C----------------
Confidence 368888999999999999775333 479999999999999884 1011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.++++
T Consensus 101 ----~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~- 175 (314)
T 3qze_A 101 ----ANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK- 175 (314)
T ss_dssp ----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT-
T ss_pred ----CcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc-
Confidence 114788899999999999999999762 15664 34677888888873
Q ss_pred cCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCCC
Q 022982 228 LGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLGK 276 (289)
Q Consensus 228 l~~ekli--fEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G~ 276 (289)
.| +|+ =|+ ++-.+...+++..+++..+.-- +|-+.+++|..|--|-
T Consensus 176 ~p--nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G-~d~~~l~~l~~Ga~G~ 224 (314)
T 3qze_A 176 VP--NIIGIKEATGDLQRAKEVIERVGKDFLVYSG-DDATAVELMLLGGKGN 224 (314)
T ss_dssp ST--TEEEEEECSCCHHHHHHHHHHSCTTSEEEES-CGGGHHHHHHTTCCEE
T ss_pred CC--CEEEEEcCCCCHHHHHHHHHHcCCCeEEEec-ChHHHHHHHHCCCCEE
Confidence 43 442 244 5667778888889988777533 3445789999775543
No 67
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.14 E-value=2.6 Score=38.49 Aligned_cols=143 Identities=19% Similarity=0.182 Sum_probs=97.3
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc----cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSL----EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti----~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+. ||. .|+.++|.++++.+.+. +=++.-=+|+-
T Consensus 25 ~~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------------------- 81 (300)
T 3eb2_A 25 DVMGRLCDDLIQAGVHGLTPL-GSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA---------------------- 81 (300)
T ss_dssp HHHHHHHHHHHHTTCSCBBTT-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE----------------------
T ss_pred HHHHHHHHHHHHcCCCEEEEC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC----------------------
Confidence 367888888889999999554 443 69999999999999884 11111112330
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccCC----CCccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKHA----DSLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~~----G~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+.= -++..+.+.++.
T Consensus 82 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La- 155 (300)
T 3eb2_A 82 -----STSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA- 155 (300)
T ss_dssp -----ESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH-
T ss_pred -----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH-
Confidence 114788899999999999999999652 157642 257778888885
Q ss_pred ccCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~ekli--fEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+.| +|+ =|+ .+-.+...+++..++++.+..-.++ +.+++|..|--|
T Consensus 156 ~~p--nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~d~-~~~~~l~~G~~G 204 (300)
T 3eb2_A 156 EHP--RIRYIKDASTNTGRLLSIINRCGDALQVFSASAH-IPAAVMLIGGVG 204 (300)
T ss_dssp TST--TEEEEEECSSBHHHHHHHHHHHGGGSEEEECTTS-CHHHHHHTTCCE
T ss_pred cCC--CEEEEEcCCCCHHHHHHHHHHcCCCeEEEeCcHH-HHHHHHhCCCCE
Confidence 343 442 244 4566777788888887777654444 448888877444
No 68
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=91.00 E-value=0.18 Score=46.94 Aligned_cols=119 Identities=18% Similarity=0.285 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhC-----CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHHH
Q 022982 71 FIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLVK 140 (289)
Q Consensus 71 ~l~eKI~l~~~~-----gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~lI~~~~ 140 (289)
.+.|.++-.++. +|++++..|.+--+ ..+...++.+.+.+.|.++|+||+|+.. .++.....+++.++
T Consensus 196 ~~~eiv~avr~~v~~pv~vris~~~~~~~g~--~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir 273 (338)
T 1z41_A 196 FLREIIDEVKQVWDGPLFVRVSASDYTDKGL--DIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIR 273 (338)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEECCCCSTTSC--CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEecCcccCCCCC--CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHH
Confidence 355666665543 33555644433100 0113556777888899999999999753 22323356777777
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHH
Q 022982 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRAD 219 (289)
Q Consensus 141 ~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d 219 (289)
+. +++. .--+| .+.+ .+.+++.|++| ||.|++ +|.+..+ .+
T Consensus 274 ~~-------~~iP--Vi~~G--------gi~s---------------~~~a~~~l~~G~aD~V~i-GR~~i~n-----Pd 315 (338)
T 1z41_A 274 EQ-------ADMA--TGAVG--------MITD---------------GSMAEEILQNGRADLIFI-GRELLRD-----PF 315 (338)
T ss_dssp HH-------HCCE--EEECS--------SCCS---------------HHHHHHHHHTTSCSEEEE-CHHHHHC-----TT
T ss_pred HH-------CCCC--EEEEC--------CCCC---------------HHHHHHHHHcCCceEEee-cHHHHhC-----ch
Confidence 63 2211 11011 1111 46777888999 999988 5655432 56
Q ss_pred HHHHHHhccC
Q 022982 220 IIAKVIGRLG 229 (289)
Q Consensus 220 ~v~~ii~~l~ 229 (289)
++.++.+.++
T Consensus 316 l~~ki~~~~~ 325 (338)
T 1z41_A 316 FARTAAKQLN 325 (338)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHcCCC
Confidence 7888887776
No 69
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=90.91 E-value=3.2 Score=37.88 Aligned_cols=130 Identities=11% Similarity=0.137 Sum_probs=87.8
Q ss_pred chhHHHHHHHhh-cccccEEEecCcccccc--ChhHHHHHHHHHHh-CCceec--CCcHHHHHHHhCCchHHHHHHHHHH
Q 022982 39 SHNVLEDIFESM-GQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQ-HDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQ 112 (289)
Q Consensus 39 g~~~~~DlLe~a-g~yID~lKfg~GTs~l~--p~~~l~eKI~l~~~-~gV~v~--~GtlfE~a~~qg~~~~~~yl~~~k~ 112 (289)
.+.++.+.++.+ ..-+.-+-|.+|....+ +.+.+.+.++..++ +++.++ +|. .-++.++.+++
T Consensus 92 s~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~-----------~~~e~l~~L~~ 160 (350)
T 3t7v_A 92 TMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGL-----------MDNATLLKARE 160 (350)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSS-----------CCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCCC-----------CCHHHHHHHHH
Confidence 344444444433 33367777777764433 45678888888875 466544 231 34677888899
Q ss_pred cCCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 113 VGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 113 lGF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
.|++.+-++--+. ..+.+++.+.++.+++.|+++.+ +.-.+.. +
T Consensus 161 aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~--~~i~Glg------------------------e 214 (350)
T 3t7v_A 161 KGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVED--GILTGVG------------------------N 214 (350)
T ss_dssp TTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEE--EEEESSS------------------------C
T ss_pred cCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEcc--ceEeecC------------------------C
Confidence 9999988766554 36788999999999999997544 4433321 1
Q ss_pred cHHHHHHHHHHHHHccCcEEEEe
Q 022982 183 DVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
+.+++++.++.-.+.+.+.|-+=
T Consensus 215 t~e~~~~~l~~l~~l~~~~v~~~ 237 (350)
T 3t7v_A 215 DIESTILSLRGMSTNDPDMVRVM 237 (350)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEec
Confidence 47778888888888999977653
No 70
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.84 E-value=0.66 Score=42.86 Aligned_cols=94 Identities=21% Similarity=0.315 Sum_probs=62.7
Q ss_pred HHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 110 CKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
.+. |.++|-|-||. ...+.|+.+.++|.+|.-.+|.+.. + ...++.+....+ .....+++|+
T Consensus 116 ~ka-Ga~aVklEdg~------~~~~~i~~l~~~GIpv~gHlgltPq-~------~~~~gg~~vqgr----t~~~a~~~i~ 177 (275)
T 3vav_A 116 MRA-GAQMVKFEGGE------WLAETVRFLVERAVPVCAHVGLTPQ-S------VHAFGGFKVQGK----TEAGAAQLLR 177 (275)
T ss_dssp HHT-TCSEEEEECCG------GGHHHHHHHHHTTCCEEEEEESCGG-G------HHHHC---CCCC----SHHHHHHHHH
T ss_pred HHc-CCCEEEECCch------hHHHHHHHHHHCCCCEEEecCCCce-E------EeccCCeEEEcC----CHHHHHHHHH
Confidence 344 99999999994 4477899999999999988887421 1 111111111001 0113689999
Q ss_pred HHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCC
Q 022982 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ 230 (289)
.++..-+|||+.|.+|+= .++++.+|.+++++
T Consensus 178 rA~a~~eAGA~~ivlE~v---------p~~~a~~It~~l~i 209 (275)
T 3vav_A 178 DARAVEEAGAQLIVLEAV---------PTLVAAEVTRELSI 209 (275)
T ss_dssp HHHHHHHHTCSEEEEESC---------CHHHHHHHHHHCSS
T ss_pred HHHHHHHcCCCEEEecCC---------CHHHHHHHHHhCCC
Confidence 999999999999999972 33455666665553
No 71
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=90.74 E-value=1.2 Score=38.62 Aligned_cols=146 Identities=13% Similarity=0.191 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+++.++.++++||+.||+..... ..+..+..++.+.+++.|+++..-.+.-... ... ..|++. +
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~l~-~~d~~~--------r---- 83 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEY-DFA-SPDKSV--------R---- 83 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGG-CTT-CSCHHH--------H----
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCC-CCC-CCCHHH--------H----
Confidence 689999999999999999986542 3344677788999999999987632210000 010 011100 0
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEec---ccc--ccCCCCccHHHHHHH----------HhccCCCceEEecC-------
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDS---DDV--CKHADSLRADIIAKV----------IGRLGLEKTMFEAT------- 238 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEa---rGI--~d~~G~~r~d~v~~i----------i~~l~~eklifEAP------- 238 (289)
....+.+.+.++..-+.||..|.+-. .|. +.. +.-+.+..+.+ ++..|+ +|.+|.-
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~ 161 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLD-MKDKRPYVDRAIESVRRVIKVAEDYGI-IYALEVVNRFEQWL 161 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTT-CCCCHHHHHHHHHHHHTTHHHHHHHTC-EEEEECCCTTTCSS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCC-cccHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEeCccccccc
Confidence 01234555555666678999998532 122 111 11222222222 223344 6888842
Q ss_pred --CchhHHHHHHHhCC-CcccccCCCCc
Q 022982 239 --NPRTSEWFIRRYGP-KVNLFVDHSQV 263 (289)
Q Consensus 239 --~k~qQ~~~I~~fG~-~VNLgI~~~eV 263 (289)
+..+-..+++..|+ +|-+..|..+.
T Consensus 162 ~~~~~~~~~l~~~~~~~~~g~~~D~~h~ 189 (290)
T 2qul_A 162 CNDAKEAIAFADAVDSPACKVQLDTFHM 189 (290)
T ss_dssp CCSHHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred cCCHHHHHHHHHHcCCCCEEEEEEchhh
Confidence 34566788999984 55443554433
No 72
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=90.53 E-value=1.7 Score=39.66 Aligned_cols=138 Identities=16% Similarity=0.156 Sum_probs=80.5
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (289)
.+......+| ++.++= .++ +.+.+.+++.++.++++ +.++--+.+....+ .+..++++++.|.+.|.+.|.+
T Consensus 30 ~la~av~~aG-glG~i~--~~~--~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~--~~~~~~~~~~~~~~~g~d~V~~ 102 (328)
T 2gjl_A 30 EMAAAVANAG-GLATLS--ALT--QPSPEALAAEIARCRELTDRPFGVNLTLLPTQ--KPVPYAEYRAAIIEAGIRVVET 102 (328)
T ss_dssp HHHHHHHHTT-SBCEEE--TTT--SSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS--SCCCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCC-CeEEeC--CCC--CCCHHHHHHHHHHHHHhcCCCeEEEEeccccc--cCccHHHHHHHHHhcCCCEEEE
Confidence 4555555666 566662 221 33356677777777653 21111111110000 1236899999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCc
Q 022982 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (289)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~ 200 (289)
+-|. | .++++.+++.|.++.+. + . + .+.+++..++|||
T Consensus 103 ~~g~---p----~~~~~~l~~~gi~vi~~--v---~--------------------------t----~~~a~~~~~~GaD 140 (328)
T 2gjl_A 103 AGND---P----GEHIAEFRRHGVKVIHK--C---T--------------------------A----VRHALKAERLGVD 140 (328)
T ss_dssp EESC---C----HHHHHHHHHTTCEEEEE--E---S--------------------------S----HHHHHHHHHTTCS
T ss_pred cCCC---c----HHHHHHHHHcCCCEEee--C---C--------------------------C----HHHHHHHHHcCCC
Confidence 8763 4 35778888878776521 2 0 1 3456678899999
Q ss_pred EEEEeccc---cccCCCCccHHHHHHHHhcc
Q 022982 201 MIMIDSDD---VCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 201 ~ViiEarG---I~d~~G~~r~d~v~~ii~~l 228 (289)
.|++++.+ -.........+++.++.+.+
T Consensus 141 ~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~ 171 (328)
T 2gjl_A 141 AVSIDGFECAGHPGEDDIPGLVLLPAAANRL 171 (328)
T ss_dssp EEEEECTTCSBCCCSSCCCHHHHHHHHHTTC
T ss_pred EEEEECCCCCcCCCCccccHHHHHHHHHHhc
Confidence 99998752 11111123456677776544
No 73
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.51 E-value=0.78 Score=38.77 Aligned_cols=125 Identities=10% Similarity=0.119 Sum_probs=72.5
Q ss_pred chhH-HHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNV-LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~-~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
++++ .+.+.+.-+ |++=+.. ...++.+++-++.++++|+.+...- -+|....+.++.+.+.|.|.
T Consensus 65 ~~~~~~~~~~~~Ga---d~v~v~~----~~~~~~~~~~~~~~~~~g~~~~v~~-------~~~~t~~~~~~~~~~~g~d~ 130 (211)
T 3f4w_A 65 GGHFESQLLFDAGA---DYVTVLG----VTDVLTIQSCIRAAKEAGKQVVVDM-------ICVDDLPARVRLLEEAGADM 130 (211)
T ss_dssp CHHHHHHHHHHTTC---SEEEEET----TSCHHHHHHHHHHHHHHTCEEEEEC-------TTCSSHHHHHHHHHHHTCCE
T ss_pred chHHHHHHHHhcCC---CEEEEeC----CCChhHHHHHHHHHHHcCCeEEEEe-------cCCCCHHHHHHHHHHcCCCE
Confidence 4445 555555444 5555432 2234668899999999998654210 01223455667778889999
Q ss_pred EEecCCccc--CChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHH
Q 022982 118 IELNVGSLE--IPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAER 193 (289)
Q Consensus 118 IEISdGti~--i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~ 193 (289)
|=++.|+-. .+.. -.+.++++++. ...+....|+. .+.++.
T Consensus 131 i~v~~g~~g~~~~~~-~~~~i~~l~~~~~~~~i~~~gGI~----------------------------------~~~~~~ 175 (211)
T 3f4w_A 131 LAVHTGTDQQAAGRK-PIDDLITMLKVRRKARIAVAGGIS----------------------------------SQTVKD 175 (211)
T ss_dssp EEEECCHHHHHTTCC-SHHHHHHHHHHCSSCEEEEESSCC----------------------------------TTTHHH
T ss_pred EEEcCCCcccccCCC-CHHHHHHHHHHcCCCcEEEECCCC----------------------------------HHHHHH
Confidence 988776431 1111 13456666653 34444444441 134555
Q ss_pred HHHccCcEEEEeccccccCC
Q 022982 194 CLEAGADMIMIDSDDVCKHA 213 (289)
Q Consensus 194 dLeAGA~~ViiEarGI~d~~ 213 (289)
.+++||+.|++= +.|+++.
T Consensus 176 ~~~~Gad~vvvG-sai~~~~ 194 (211)
T 3f4w_A 176 YALLGPDVVIVG-SAITHAA 194 (211)
T ss_dssp HHTTCCSEEEEC-HHHHTCS
T ss_pred HHHcCCCEEEEC-HHHcCCC
Confidence 678999999884 5687764
No 74
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.46 E-value=0.9 Score=41.36 Aligned_cols=144 Identities=10% Similarity=0.078 Sum_probs=88.8
Q ss_pred HHHHHhhcccccEEEecCccccc-cC--hhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 44 EDIFESMGQFVDGLKFSGGSHSL-MP--KPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs~l-~p--~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
-+.|..+| ||.+=+||+.+.- .| .+ ..+.++.+++. |+.+. .|. .+ .+-++.+.+.|.+.|-
T Consensus 33 ~~~L~~~G--v~~IE~g~~~~~~~~p~~~d-~~~~~~~~~~~~~~~~~--~l~-----~~----~~~i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 33 IDMLSEAG--LSVIETTSFVSPKWVPQMGD-HTEVLKGIQKFPGINYP--VLT-----PN----LKGFEAAVAAGAKEVV 98 (298)
T ss_dssp HHHHHHTT--CSEECCEECCCTTTCGGGTT-HHHHHHHSCCCTTCBCC--EEC-----CS----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHcC--cCEEEECCCcCcccccccCC-HHHHHHHHhhCCCCEEE--EEc-----CC----HHhHHHHHHCCCCEEE
Confidence 33444455 8888899875531 11 12 24444444443 43322 121 23 3347788889999999
Q ss_pred ecCCcccCC------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHH
Q 022982 120 LNVGSLEIP------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (289)
Q Consensus 120 ISdGti~i~------------~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
|+..+-+.- .+.-.+.|+.+++.|++|.-.+..-+ +...+ +..+++.+
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~-----~~~~~---------------~~~~~~~~ 158 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCAL-----GCPYE---------------GKISPAKV 158 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTT-----CBTTT---------------BSCCHHHH
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEe-----eCCcC---------------CCCCHHHH
Confidence 977654331 13445679999999998643322211 11111 11268999
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
++.++...++||+.|- |.|..|-..+..+.++++
T Consensus 159 ~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~ 192 (298)
T 2cw6_A 159 AEVTKKFYSMGCYEIS-----LGDTIGVGTPGIMKDMLS 192 (298)
T ss_dssp HHHHHHHHHTTCSEEE-----EEETTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEE-----ecCCCCCcCHHHHHHHHH
Confidence 9999999999999774 568888888888877775
No 75
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=90.35 E-value=1.9 Score=39.34 Aligned_cols=141 Identities=13% Similarity=0.220 Sum_probs=83.9
Q ss_pred chhHHHHHHHhhc-ccccEEEecCccc-cccChhHHH-----------------HHHHHHHhC--CceecCCcHHHHHHH
Q 022982 39 SHNVLEDIFESMG-QFVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIR 97 (289)
Q Consensus 39 g~~~~~DlLe~ag-~yID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~--gV~v~~GtlfE~a~~ 97 (289)
.+..+.+++...- .-.|++=+|.=-| .+.+-..++ +.++-.|+. ++++..=|++...+.
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 4556666655543 2499999994321 122222233 345555554 343332267888777
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
.| +++|++.|++.|+|.+=|. ++|.++..++++.++++|+.+.+=+.. .
T Consensus 112 ~g---~~~f~~~~~~aGvdGvIip----Dlp~ee~~~~~~~~~~~gl~~I~lvap---~--------------------- 160 (271)
T 3nav_A 112 RG---IDDFYQRCQKAGVDSVLIA----DVPTNESQPFVAAAEKFGIQPIFIAPP---T--------------------- 160 (271)
T ss_dssp TC---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEEEECT---T---------------------
T ss_pred Hh---HHHHHHHHHHCCCCEEEEC----CCCHHHHHHHHHHHHHcCCeEEEEECC---C---------------------
Confidence 75 8999999999999999886 577788889999999999885443311 0
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEecc-ccccCCCCccH
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSD-DVCKHADSLRA 218 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-GI~d~~G~~r~ 218 (289)
+++ +++++-.+.+..+|=.-++ |++........
T Consensus 161 -----t~~---eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~ 194 (271)
T 3nav_A 161 -----ASD---ETLRAVAQLGKGYTYLLSRAGVTGAETKANM 194 (271)
T ss_dssp -----CCH---HHHHHHHHHCCSCEEECCCC--------CCH
T ss_pred -----CCH---HHHHHHHHHCCCeEEEEeccCCCCcccCCch
Confidence 123 3444444667777877776 66665544443
No 76
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=90.34 E-value=0.62 Score=43.18 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=67.3
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHH
Q 022982 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~ 185 (289)
-.+..++-|.++|-|-|| ++....|+.+.++|..|.-.+|..-.. ...++.+....+- . ..+
T Consensus 118 a~rl~~eaGa~aVklEdg------~e~~~~I~al~~agIpV~gHiGLtPqs-------v~~~ggf~v~grt----~-~a~ 179 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGG------ERVAEQIACLTAAGIPVMAHIGFTPQS-------VNTLGGFRVQGRG----D-AAE 179 (281)
T ss_dssp HHHHHHTTCCSEEEEEBS------GGGHHHHHHHHHHTCCEEEEEECCC---------------------C----H-HHH
T ss_pred HHHHHHHhCCeEEEECCc------HHHHHHHHHHHHCCCCEEeeecCCcce-------ecccCCeEEEeCc----H-HHH
Confidence 355668899999999999 467889999999999888888874211 1111111110010 1 268
Q ss_pred HHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 186 LLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 186 ~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
++|+.+++..+|||+.|.+|+- ..++.++|.+.+++-
T Consensus 180 ~~i~rA~a~~eAGA~~ivlE~v---------p~~~a~~it~~l~iP 216 (281)
T 1oy0_A 180 QTIADAIAVAEAGAFAVVMEMV---------PAELATQITGKLTIP 216 (281)
T ss_dssp HHHHHHHHHHHHTCSEEEEESC---------CHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHcCCcEEEEecC---------CHHHHHHHHHhCCCC
Confidence 9999999999999999999982 245677777776643
No 77
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=90.32 E-value=1.1 Score=41.67 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=86.3
Q ss_pred HHHhhcccccEEEecCccccccChhHHHHHHHHHHh----CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022982 46 IFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 46 lLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~----~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (289)
.|..+| ||.+=.||+.+.-.+.+.+++..+.... -++.+. ++..+ . + .++.+.+.|.+.|-|.
T Consensus 50 ~L~~~G--v~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~-------~l~~~--~-~-~i~~a~~~g~~~v~i~ 116 (337)
T 3ble_A 50 LLQKLN--VDRVEIASARVSKGELETVQKIMEWAATEQLTERIEIL-------GFVDG--N-K-TVDWIKDSGAKVLNLL 116 (337)
T ss_dssp HHHTTC--CSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEE-------EESST--T-H-HHHHHHHHTCCEEEEE
T ss_pred HHHHcC--CCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEE-------EEccc--h-h-hHHHHHHCCCCEEEEE
Confidence 444455 7888888876533333556655554321 122221 22222 1 1 5788888999999986
Q ss_pred CCcccC------------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 122 VGSLEI------------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 122 dGti~i------------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
..+-++ ..+.-.+.|+.+++.|++|. +...+ +...+..+++.+++
T Consensus 117 ~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~--~~~~~---------------------~~~~~~~~~~~~~~ 173 (337)
T 3ble_A 117 TKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKIN--VYLED---------------------WSNGFRNSPDYVKS 173 (337)
T ss_dssp EECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEE--EEEET---------------------HHHHHHHCHHHHHH
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE--EEEEE---------------------CCCCCcCCHHHHHH
Confidence 543222 12455678899999998753 44421 00001125889999
Q ss_pred HHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
.+++..++||+.|. |+|..|-..+..+.++++.
T Consensus 174 ~~~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~ 206 (337)
T 3ble_A 174 LVEHLSKEHIERIF-----LPDTLGVLSPEETFQGVDS 206 (337)
T ss_dssp HHHHHHTSCCSEEE-----EECTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEE-----EecCCCCcCHHHHHHHHHH
Confidence 99999999999774 5777787777777666643
No 78
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=90.28 E-value=0.4 Score=41.81 Aligned_cols=136 Identities=13% Similarity=0.173 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+++.++.++++||+.||+. +.. + +..++-+.+++.|+++..- ...... + |..+ .
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~-~~~--~--~~~~~~~~l~~~gl~~~~~-~~~~~~-------~--------~~~~----~ 86 (301)
T 3cny_A 32 NLQQLLSDIVVAGFQGTEVG-GFF--P--GPEKLNYELKLRNLEIAGQ-WFSSYI-------I--------RDGI----E 86 (301)
T ss_dssp CHHHHHHHHHHHTCCEECCC-TTC--C--CHHHHHHHHHHTTCEECEE-EEEECH-------H--------HHHH----H
T ss_pred CHHHHHHHHHHhCCCEEEec-CCC--C--CHHHHHHHHHHCCCeEEEE-eccCCC-------C--------hhhH----H
Confidence 68899999999999999999 333 3 5667888899999997764 221100 0 0000 1
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEecc-----ccccC--C--CCc-cHH-------H---HHHHHhccCCCceEEecC---
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSD-----DVCKH--A--DSL-RAD-------I---IAKVIGRLGLEKTMFEAT--- 238 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEar-----GI~d~--~--G~~-r~d-------~---v~~ii~~l~~eklifEAP--- 238 (289)
...+.+.+.++..-+.||..|++=+- |-+.. . ... +.+ . +.++++..|+ +|.+|.-
T Consensus 87 ~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lE~~~~~ 165 (301)
T 3cny_A 87 KASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGL-KVAYHHHMGT 165 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCC-EEEEecCCCc
Confidence 12455566666666899999988641 33211 0 111 222 1 2233344555 5888853
Q ss_pred ---CchhHHHHHHHhCC-CcccccCCCCc
Q 022982 239 ---NPRTSEWFIRRYGP-KVNLFVDHSQV 263 (289)
Q Consensus 239 ---~k~qQ~~~I~~fG~-~VNLgI~~~eV 263 (289)
.+.+-..++++.++ +|-+..|..+.
T Consensus 166 ~~~~~~~~~~l~~~~~~~~vg~~~D~~h~ 194 (301)
T 3cny_A 166 GIQTKEETDRLMANTDPKLVGLLYDTGHI 194 (301)
T ss_dssp SSCSHHHHHHHHHTSCTTTCEEEEEHHHH
T ss_pred ccCCHHHHHHHHHhCCccceeEEechHHH
Confidence 45677889999985 45544554433
No 79
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.16 E-value=1.7 Score=46.12 Aligned_cols=78 Identities=10% Similarity=0.074 Sum_probs=49.8
Q ss_pred hhHHHHHHHhh-cccccEEEec-----------CccccccChhHHHHHHHHHHhC-CceecC-CcHHHHHHHhCCchHHH
Q 022982 40 HNVLEDIFESM-GQFVDGLKFS-----------GGSHSLMPKPFIEEVVKRAHQH-DVYVST-GDWAEHLIRNGPSAFKE 105 (289)
Q Consensus 40 ~~~~~DlLe~a-g~yID~lKfg-----------~GTs~l~p~~~l~eKI~l~~~~-gV~v~~-GtlfE~a~~qg~~~~~~ 105 (289)
+..+.++.+.+ ....|++=+- +|.+.....+.+.+.++-.+++ ++++.- .. .+...+.+
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-------~~~~~~~~ 719 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-------PNVTDIVS 719 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-------SCSSCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-------CChHHHHH
Confidence 44555555544 2345666554 4555556778899999999887 655442 11 01124677
Q ss_pred HHHHHHHcCCCEEEecCCc
Q 022982 106 YVEDCKQVGFDTIELNVGS 124 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGt 124 (289)
+.+.+.+.|.|+|-+||.+
T Consensus 720 ~a~~~~~~G~d~i~v~Nt~ 738 (1025)
T 1gte_A 720 IARAAKEGGADGVTATNTV 738 (1025)
T ss_dssp HHHHHHHHTCSEEEECCCE
T ss_pred HHHHHHHcCCCEEEEeccc
Confidence 7888899999999998754
No 80
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.06 E-value=2.2 Score=38.83 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCC-cccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGL-KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~-~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-= ++.-=+|+ |
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-------g----------------- 80 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV-------L----------------- 80 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE-------C-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------C-----------------
Confidence 67888999999999999886553 57999999999999998411 11111233 1
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
..+..+.|++++..-++|||.|++=.
T Consensus 81 ---~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 81 ---VDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp ---CSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ---CccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 11477889999999999999999854
No 81
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=89.97 E-value=1.5 Score=39.31 Aligned_cols=44 Identities=14% Similarity=0.237 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCEEEecCCcc-cCC----hhHHHHHHHHHHHcCCc---ccc
Q 022982 105 EYVEDCKQVGFDTIELNVGSL-EIP----EETLLRYVRLVKSAGLK---AKP 148 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-~i~----~~~r~~lI~~~~~~G~~---v~~ 148 (289)
+.++.++++||+.||++.... ..+ ..+..++-+.+++.|++ +.+
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~ 86 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKIST 86 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEE
Confidence 899999999999999986543 222 36677888889999999 655
No 82
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.85 E-value=2.4 Score=35.63 Aligned_cols=94 Identities=14% Similarity=0.062 Sum_probs=61.4
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
.+....++++..++++|++|+|++.+.-...+.+++.- +.+ ++++..+--+ .+ --+.|.+.+.+.|.|.
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~---~~~~~~~i~~~l~~-----~d--i~~~~~~~a~~~Gad~ 80 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVK---KAHPDKIVFADMKT-----MD--AGELEADIAFKAGADL 80 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHH---HHSTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHH---HhCCCCeEEEEEEe-----cC--ccHHHHHHHHhCCCCE
Confidence 56688889999999999999999865334444444422 223 5554432100 12 1355788999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCc
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKSAGLK 145 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (289)
|=|..+.- .+.-.++++.+++.|..
T Consensus 81 v~vh~~~~---~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 81 VTVLGSAD---DSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp EEEETTSC---HHHHHHHHHHHHHHTCE
T ss_pred EEEeccCC---hHHHHHHHHHHHHcCCc
Confidence 98887654 23445677777777766
No 83
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.72 E-value=1.3 Score=41.32 Aligned_cols=96 Identities=18% Similarity=0.257 Sum_probs=68.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~ 171 (289)
+-+-.+...+.|..+|-|=|+.. -+|.++.++-|+.+++.| +.|-+.- ..|. +
T Consensus 106 v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~----~~~~I~A-------Rtda-~---- 169 (305)
T 3ih1_A 106 VARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA----PSLYIVA-------RTDA-R---- 169 (305)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC----TTSEEEE-------EECC-H----
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC----CCeEEEE-------eecc-c----
Confidence 33445666678999999999863 477888888898888873 2344421 1121 0
Q ss_pred ccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCC
Q 022982 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ 230 (289)
.....++.|++++...+||||.|.+|+- -..+++.+|.+.++.
T Consensus 170 --------~~~g~~~ai~Ra~ay~eAGAD~i~~e~~--------~~~~~~~~i~~~~~~ 212 (305)
T 3ih1_A 170 --------GVEGLDEAIERANAYVKAGADAIFPEAL--------QSEEEFRLFNSKVNA 212 (305)
T ss_dssp --------HHHCHHHHHHHHHHHHHHTCSEEEETTC--------CSHHHHHHHHHHSCS
T ss_pred --------cccCHHHHHHHHHHHHHcCCCEEEEcCC--------CCHHHHHHHHHHcCC
Confidence 0124789999999999999999999984 135778888887764
No 84
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=89.61 E-value=0.55 Score=40.83 Aligned_cols=47 Identities=26% Similarity=0.221 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc----ccCChhHHHHHHHHHHHcCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS----LEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt----i~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+++.++.++++||++||+.... ..++.++..++.+.+++.|+++..
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 66 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITM 66 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEE
T ss_pred CHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 46677777777777777774211 113345556666666777776543
No 85
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=89.61 E-value=1.5 Score=40.23 Aligned_cols=143 Identities=12% Similarity=0.123 Sum_probs=87.4
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhC-CchHHHHHHHHHHcCCCEEEe
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIEL 120 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg-~~~~~~yl~~~k~lGF~~IEI 120 (289)
.+-+.|..+| +|.+=.||..+.=-+.+.+++..+.. -++.+.. +.++ +..++..++..+..|.+.|-|
T Consensus 31 ~i~~~L~~~G--v~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~-------l~~~~~~di~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 31 QIALQLEKLG--IDVIEAGFPISSPGDFECVKAIAKAI--KHCSVTG-------LARCVEGDIDRAEEALKDAVSPQIHI 99 (293)
T ss_dssp HHHHHHHHHT--CSEEEEECGGGCHHHHHHHHHHHHHC--CSSEEEE-------EEESSHHHHHHHHHHHTTCSSEEEEE
T ss_pred HHHHHHHHcC--CCEEEEeCCCCCccHHHHHHHHHHhc--CCCEEEE-------EecCCHHHHHHHHHHHhhcCCCEEEE
Confidence 3445566666 77788888654322233444433322 2343321 1111 114666666677789998887
Q ss_pred cCCccc--------CChh----HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHH
Q 022982 121 NVGSLE--------IPEE----TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (289)
Q Consensus 121 SdGti~--------i~~~----~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I 188 (289)
...+-+ .+.+ .-.+.|+.+++.|+.|. |+..+. +..|++.++
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~--~~~~d~------------------------~~~~~~~~~ 153 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQ--FSPEDA------------------------TRSDRAFLI 153 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEE--EEEETG------------------------GGSCHHHHH
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEE--EEeccC------------------------CCCCHHHHH
Confidence 654432 2222 34577888899888753 444221 012588899
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
+.+++..++||+.| .|.|..|-..+..+.++++
T Consensus 154 ~~~~~~~~~G~~~i-----~l~DT~G~~~P~~v~~lv~ 186 (293)
T 3ewb_X 154 EAVQTAIDAGATVI-----NIPDTVGYTNPTEFGQLFQ 186 (293)
T ss_dssp HHHHHHHHTTCCEE-----EEECSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EecCCCCCCCHHHHHHHHH
Confidence 99999999999976 4788888888887777764
No 86
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=89.47 E-value=1.3 Score=44.52 Aligned_cols=147 Identities=11% Similarity=0.126 Sum_probs=100.1
Q ss_pred hhcccccEEEecCccccccChhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc
Q 022982 49 SMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (289)
Q Consensus 49 ~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v--~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (289)
....=+|.+-+-..++-+ +.+++-|+.++++|..+ +... |.....+++.+-+..+.+.+.|.+.|=|-|-.--
T Consensus 126 a~~aGvd~vrIf~s~sd~---~ni~~~i~~ak~~G~~v~~~i~~--~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~ 200 (539)
T 1rqb_A 126 SAENGMDVFRVFDAMNDP---RNMAHAMAAVKKAGKHAQGTICY--TISPVHTVEGYVKLAGQLLDMGADSIALKDMAAL 200 (539)
T ss_dssp HHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEEC--CCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCC
T ss_pred HHhCCCCEEEEEEehhHH---HHHHHHHHHHHHCCCeEEEEEEe--eeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 333448888887766665 57999999999999966 2110 0001223445666677778899999999998888
Q ss_pred CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 127 IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 127 i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
+.+.+-.++|+.++++ +...-.+++.+ .. |...-+-.+...++|||+.| ++
T Consensus 201 ~~P~~v~~lv~~l~~~-~p~~i~I~~H~-Hn-------------------------d~GlAvAN~laAveAGa~~V--D~ 251 (539)
T 1rqb_A 201 LKPQPAYDIIKAIKDT-YGQKTQINLHC-HS-------------------------TTGVTEVSLMKAIEAGVDVV--DT 251 (539)
T ss_dssp CCHHHHHHHHHHHHHH-HCTTCCEEEEE-BC-------------------------TTSCHHHHHHHHHHTTCSEE--EE
T ss_pred cCHHHHHHHHHHHHHh-cCCCceEEEEe-CC-------------------------CCChHHHHHHHHHHhCCCEE--EE
Confidence 8899889999999884 10012344432 11 12223677788999999965 65
Q ss_pred c--ccccCCCCccHHHHHHHHhccC
Q 022982 207 D--DVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 207 r--GI~d~~G~~r~d~v~~ii~~l~ 229 (289)
- |+=...||...+.+-..+...|
T Consensus 252 ti~g~GertGN~~lE~lv~~L~~~g 276 (539)
T 1rqb_A 252 AISSMSLGPGHNPTESVAEMLEGTG 276 (539)
T ss_dssp BCGGGCSTTSBCBHHHHHHHTTTSS
T ss_pred eccccCCCccChhHHHHHHHHHhcC
Confidence 4 8878889988887766665544
No 87
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=89.42 E-value=3.5 Score=35.61 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+++.++.++++||+.||+..-. ..+..++-+.+++.|+++.. ++. +..... ..+.-+ ...|... .
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~l~~~gl~~~~-~~~--~~~~~~-~~~~~~--~~~~~~r----~ 89 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPY----DFDADVIARELKQHNLTQVL-FNM--PPGDWA-AGERGM--AAISGRE----Q 89 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCT----TSCHHHHHHHHHHTTCEEEE-EEC--CCSCTT-TTCCBC--TTCTTCH----H
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----cCCHHHHHHHHHHcCCcEEE-Eec--CCCccc-cCCCCc--CCCccHH----H
Confidence 79999999999999999998521 23456788888999999754 221 110000 000000 0001110 1
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccH-------HHHHH---HHhccCCCceEEec------C-----Cc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIAK---VIGRLGLEKTMFEA------T-----NP 240 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~-------d~v~~---ii~~l~~eklifEA------P-----~k 240 (289)
...+.+.+.++..-+.||..|.+-+ | . ..+.-+. +.+.+ +++..|+ +|.+|. | ..
T Consensus 90 ~~~~~~~~~i~~A~~lGa~~v~~~~-g-~-~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~n~~~~~~~~~~~~ 165 (269)
T 3ngf_A 90 EFRDNVDIALHYALALDCRTLHAMS-G-I-TEGLDRKACEETFIENFRYAADKLAPHGI-TVLVEPLNTRNMPGYFIVHQ 165 (269)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEECCB-C-B-CTTSCHHHHHHHHHHHHHHHHHHHGGGTC-EEEECCCCTTTSTTBSCCCH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcc-C-C-CCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeeCCcccCccchhcCH
Confidence 1234445555555578999998854 3 2 2221111 22222 3344555 588894 2 45
Q ss_pred hhHHHHHHHhCC-CcccccCCCCc
Q 022982 241 RTSEWFIRRYGP-KVNLFVDHSQV 263 (289)
Q Consensus 241 ~qQ~~~I~~fG~-~VNLgI~~~eV 263 (289)
.+-..++++.|+ +|-+.+|...+
T Consensus 166 ~~~~~l~~~v~~~~vg~~~D~~h~ 189 (269)
T 3ngf_A 166 LEAVGLVKRVNRPNVAVQLDLYHA 189 (269)
T ss_dssp HHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEhhhH
Confidence 567889999984 44443554443
No 88
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.40 E-value=2.1 Score=38.87 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=101.4
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv-------g--------------- 77 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGT-------G--------------- 77 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C---------------
Confidence 36788899999999999988654 4489999999999999873 2 11111233 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .| ++..+.+.++++
T Consensus 78 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (294)
T 2ehh_A 78 -----GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLAS 152 (294)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHh
Confidence 114778899999999999999998652 15663 23 678899999984
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+. .+|+- |+ ++-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 153 ~~--pnivgiKds~gd~~~~~~~~~~~~~~f~v~-~G~d~~~~~~l~~G~~G 201 (294)
T 2ehh_A 153 EC--ENIVASKESTPNMDRISEIVKRLGESFSVL-SGDDSLTLPMMALGAKG 201 (294)
T ss_dssp HC--TTEEEEEECCSCHHHHHHHHHHHCTTSEEE-ESSGGGHHHHHHTTCCE
T ss_pred hC--CCEEEEEeCCCCHHHHHHHHHhcCCCeEEE-ECcHHHHHHHHHCCCCE
Confidence 44 45542 55 46667778888888776654 33455678899877544
No 89
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=89.37 E-value=1.3 Score=41.27 Aligned_cols=116 Identities=19% Similarity=0.257 Sum_probs=74.0
Q ss_pred HHHhCCceecC-C--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcC
Q 022982 78 RAHQHDVYVST-G--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAG 143 (289)
Q Consensus 78 l~~~~gV~v~~-G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G 143 (289)
+++..++++.- + || .+|..+-+-.+...+.|..+|-|=|+.. -+|.++-++-|+.+++.-
T Consensus 78 I~r~~~~PviaD~d~Gy------g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~ 151 (298)
T 3eoo_A 78 ITNATNLPLLVDIDTGW------GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDAR 151 (298)
T ss_dssp HHHHCCSCEEEECTTCS------SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHC
T ss_pred HHhhcCCeEEEECCCCC------CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhc
Confidence 45566776553 1 23 1222334445566678999999999874 367887777777776641
Q ss_pred CcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHH
Q 022982 144 LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAK 223 (289)
Q Consensus 144 ~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ 223 (289)
- -+.|-+.- .-|. + .....++.|++++...+||||.|.+|+- -..+++.+
T Consensus 152 ~--~~~~~I~A-------RTDa-~------------~~~gldeai~Ra~ay~~AGAD~if~~~~--------~~~ee~~~ 201 (298)
T 3eoo_A 152 T--DETFVIMA-------RTDA-A------------AAEGIDAAIERAIAYVEAGADMIFPEAM--------KTLDDYRR 201 (298)
T ss_dssp S--STTSEEEE-------EECT-H------------HHHHHHHHHHHHHHHHHTTCSEEEECCC--------CSHHHHHH
T ss_pred c--CCCeEEEE-------eehh-h------------hhcCHHHHHHHHHhhHhcCCCEEEeCCC--------CCHHHHHH
Confidence 0 12333310 1121 0 1224789999999999999999999984 14777888
Q ss_pred HHhccC
Q 022982 224 VIGRLG 229 (289)
Q Consensus 224 ii~~l~ 229 (289)
+.+.++
T Consensus 202 ~~~~~~ 207 (298)
T 3eoo_A 202 FKEAVK 207 (298)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 887776
No 90
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=89.25 E-value=1.2 Score=38.26 Aligned_cols=100 Identities=14% Similarity=0.068 Sum_probs=70.4
Q ss_pred HHHHHHhhccc-ccEEEecCccc-cccChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 43 LEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~eKI~l~~~~gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
+++.++.+.+. .|.+=+..... .-++.+.+++..++++++|+.++. +.+.. +..+.+++.++.|+++|.+.|=
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v~ 107 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLIV 107 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc----CCHHHHHHHHHHHHHhCCCEEE
Confidence 45555544443 67777665421 123456689999999999998775 32211 2334789999999999999999
Q ss_pred ecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 022982 120 LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 120 ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
+.-| .+.+.++.+.+++.|.++.-|-.
T Consensus 108 ~~p~-----~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 108 GVPN-----YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp EEEC-----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred ecCC-----HHHHHHHHHHHHHcCCEEEEecC
Confidence 8654 57778899999999998666654
No 91
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=89.24 E-value=0.23 Score=43.48 Aligned_cols=151 Identities=13% Similarity=0.138 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccc-----ccccccccCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR-----AFGAYVARAP 175 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt-i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~-----~~~~~~~~~~ 175 (289)
.+++.++.++++||+.||+.... ..++.++..++.+.+++.|+++..- ..-...... .|. .++ ...|..
T Consensus 22 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~g~~~---~~~~~~~~~~~-~~~~~~ 96 (290)
T 3tva_A 22 GLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI-FGGFDGESY---ADIPTTARTVG-LVPLET 96 (290)
T ss_dssp SSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE-ECCCTTCCC---SSHHHHHHHSS-SCSTTT
T ss_pred CHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE-eeccCCccc---ccccccccccC-CCCHHH
Confidence 67888999999999999999743 3577888889999999999987552 210000000 000 000 000111
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEeccccccCC--CCcc--HHHHHH---HHhccCCCceEEecC--CchhHHHH
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHA--DSLR--ADIIAK---VIGRLGLEKTMFEAT--NPRTSEWF 246 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~--G~~r--~d~v~~---ii~~l~~eklifEAP--~k~qQ~~~ 246 (289)
+ ....+.+.+.++..-+.||..|++-+ |....+ ..++ .+.+.+ +++..|+ ++.+|.- .+.+-..+
T Consensus 97 r----~~~~~~~~~~i~~a~~lG~~~v~~~~-G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~~~~~~~~~~l 170 (290)
T 3tva_A 97 R----ASRVAEMKEISDFASWVGCPAIGLHI-GFVPESSSPDYSELVRVTQDLLTHAANHGQ-AVHLETGQESADHLLEF 170 (290)
T ss_dssp H----HHHHHHHHHHHHHHHHHTCSEEEECC-CCCCCTTSHHHHHHHHHHHHHHHHHHTTTC-EEEEECCSSCHHHHHHH
T ss_pred H----HHHHHHHHHHHHHHHHcCCCEEEEcC-CCCcccchHHHHHHHHHHHHHHHHHHHcCC-EEEEecCCCCHHHHHHH
Confidence 1 11244555555555678999999864 211111 0010 112222 3334454 5667763 45677889
Q ss_pred HHHhC-CCcccccCCCCc
Q 022982 247 IRRYG-PKVNLFVDHSQV 263 (289)
Q Consensus 247 I~~fG-~~VNLgI~~~eV 263 (289)
++.+| |+|-+-.|..+.
T Consensus 171 ~~~~~~~~~g~~~D~~h~ 188 (290)
T 3tva_A 171 IEDVNRPNLGINFDPANM 188 (290)
T ss_dssp HHHHCCTTEEEEECHHHH
T ss_pred HHhcCCCCEEEEeccHHH
Confidence 99998 555553554443
No 92
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=89.19 E-value=0.9 Score=41.63 Aligned_cols=79 Identities=14% Similarity=0.187 Sum_probs=55.8
Q ss_pred chhHHHHHHHhhcccccEEEe------------cCccccccChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCc
Q 022982 39 SHNVLEDIFESMGQFVDGLKF------------SGGSHSLMPKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPS 101 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKf------------g~GTs~l~p~~~l~eKI~l~~~~-gV~v~----~GtlfE~a~~qg~~ 101 (289)
.+..+.+....+-++.|.+-+ ++|++.+-..+.+.+.++-.++. +++|. +| |-+ .+
T Consensus 69 ~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G-~~~------~~ 141 (318)
T 1vhn_A 69 EPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG-WEK------NE 141 (318)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC-SSS------CC
T ss_pred CHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC-CCh------HH
Confidence 355666666666666888776 45667777788899999888774 55443 33 311 12
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL 125 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti 125 (289)
.+ ++.+.+.+.|.++|.|+.++-
T Consensus 142 ~~-~~a~~l~~~G~d~i~v~g~~~ 164 (318)
T 1vhn_A 142 VE-EIYRILVEEGVDEVFIHTRTV 164 (318)
T ss_dssp HH-HHHHHHHHTTCCEEEEESSCT
T ss_pred HH-HHHHHHHHhCCCEEEEcCCCc
Confidence 33 888999999999999998764
No 93
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=89.16 E-value=1.5 Score=38.84 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=74.4
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (289)
+.+.+++.- +|++=+ +++.+.+++.+++-++.+|++|+.+...- ... +..+.+.++|+|+|=++
T Consensus 93 ~i~~~~~~G---ad~V~l--~~~~~~~p~~l~~~i~~~~~~g~~v~~~v----------~t~-eea~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 93 DVDALAQAG---AAIIAV--DGTARQRPVAVEALLARIHHHHLLTMADC----------SSV-DDGLACQRLGADIIGTT 156 (232)
T ss_dssp HHHHHHHHT---CSEEEE--ECCSSCCSSCHHHHHHHHHHTTCEEEEEC----------CSH-HHHHHHHHTTCSEEECT
T ss_pred HHHHHHHcC---CCEEEE--CccccCCHHHHHHHHHHHHHCCCEEEEeC----------CCH-HHHHHHHhCCCCEEEEc
Confidence 455555443 455533 34455444679999999999999877641 011 23355678999999543
Q ss_pred C-Cccc---CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHc
Q 022982 122 V-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEA 197 (289)
Q Consensus 122 d-Gti~---i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeA 197 (289)
. |..+ ....+ .++++++++.+..|..+-|+.. .+.+++.+++
T Consensus 157 ~~g~t~~~~~~~~~-~~~i~~l~~~~ipvIA~GGI~t---------------------------------~~d~~~~~~~ 202 (232)
T 3igs_A 157 MSGYTTPDTPEEPD-LPLVKALHDAGCRVIAEGRYNS---------------------------------PALAAEAIRY 202 (232)
T ss_dssp TTTSSSSSCCSSCC-HHHHHHHHHTTCCEEEESCCCS---------------------------------HHHHHHHHHT
T ss_pred CccCCCCCCCCCCC-HHHHHHHHhcCCcEEEECCCCC---------------------------------HHHHHHHHHc
Confidence 2 2211 11112 3677777776677777777621 3556677899
Q ss_pred cCcEEEEecccccc
Q 022982 198 GADMIMIDSDDVCK 211 (289)
Q Consensus 198 GA~~ViiEarGI~d 211 (289)
||+-|+| +..|++
T Consensus 203 GadgV~V-Gsal~~ 215 (232)
T 3igs_A 203 GAWAVTV-GSAITR 215 (232)
T ss_dssp TCSEEEE-CHHHHC
T ss_pred CCCEEEE-ehHhcC
Confidence 9999999 566764
No 94
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=89.05 E-value=1.1 Score=41.84 Aligned_cols=98 Identities=17% Similarity=0.222 Sum_probs=60.5
Q ss_pred hhHHHHHHHhhccc-ccEEEec------------CccccccChhHHHHHHHHHHh-CCceecC----CcHHHHHHHhCCc
Q 022982 40 HNVLEDIFESMGQF-VDGLKFS------------GGSHSLMPKPFIEEVVKRAHQ-HDVYVST----GDWAEHLIRNGPS 101 (289)
Q Consensus 40 ~~~~~DlLe~ag~y-ID~lKfg------------~GTs~l~p~~~l~eKI~l~~~-~gV~v~~----GtlfE~a~~qg~~ 101 (289)
+..+.+....+-++ .|.+=+. +|++.+-..+.+.+.|+-.++ .+++|.. | |-+. ....
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g-~~~~---~~~~ 144 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG-LEGK---ETYR 144 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC-BTTC---CCHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC-cCcc---ccHH
Confidence 44555444444333 5555554 567777888889999988887 3665443 4 2221 0001
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC----------ChhHHHHHHHHHHHc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEI----------PEETLLRYVRLVKSA 142 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i----------~~~~r~~lI~~~~~~ 142 (289)
...++.+.+.+.|.++|-|+.++-.. +.-+ ..+|+.+++.
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~-~~~i~~ik~~ 194 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR-HDWVHRLKGD 194 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCccc-HHHHHHHHHh
Confidence 35677888999999999999976421 1112 4678887773
No 95
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=89.02 E-value=2.3 Score=36.29 Aligned_cols=48 Identities=4% Similarity=-0.081 Sum_probs=33.7
Q ss_pred HHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 022982 76 VKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (289)
Q Consensus 76 I~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (289)
++.++++ ||.+.|.|-.|....+-.+.++.....+.+.||+.+-++..
T Consensus 93 i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~ 141 (208)
T 2czd_A 93 VMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT 141 (208)
T ss_dssp HHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS
T ss_pred HHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC
Confidence 5666666 99888876333221100238999999999999999988865
No 96
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.95 E-value=4.8 Score=37.43 Aligned_cols=83 Identities=20% Similarity=0.227 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCc--c------c----------CChhHHH----HHHHHHHHcCCcccce--eeeecCCCC
Q 022982 103 FKEYVEDCKQVGFDTIELNVGS--L------E----------IPEETLL----RYVRLVKSAGLKAKPK--FAVMFNKSD 158 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGt--i------~----------i~~~~r~----~lI~~~~~~G~~v~~E--~g~k~~~~e 158 (289)
|-+--+.|++.|||.|||.-+. + + -+.+.|. ++|+.+++. +-++ +++|..
T Consensus 154 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~a---vG~d~pV~vRls--- 227 (349)
T 3hgj_A 154 FVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREV---VPRELPLFVRVS--- 227 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH---SCTTSCEEEEEE---
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHH---hcCCceEEEEec---
Confidence 3333455678899999997654 1 1 1345554 455555553 1111 455442
Q ss_pred CCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 159 IPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 159 vg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
|..|...+. ++++.++.++..-++|+++|-+=.
T Consensus 228 --------------~~~~~~~g~-~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 228 --------------ATDWGEGGW-SLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp --------------SCCCSTTSC-CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred --------------cccccCCCC-CHHHHHHHHHHHHHcCCCEEEEec
Confidence 222221122 578889999998999999998754
No 97
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=88.94 E-value=5.9 Score=38.59 Aligned_cols=78 Identities=18% Similarity=0.157 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-----------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-----------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-----------------~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d 164 (289)
.+.+..+.|.+.|.|+|-+++++..-. ...-.++|+.+++.=-.-+|=++.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~------------ 379 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS------------ 379 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE------------
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE------------
Confidence 567788889999999999999987311 111357788887740001233333
Q ss_pred cccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc-cc
Q 022982 165 RAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD-VC 210 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG-I~ 210 (289)
|. +.|+ +.+.+.|++||+.|++ +|+ +|
T Consensus 380 ---GG-----------I~s~----~DA~e~l~aGAd~Vqi-grall~ 407 (443)
T 1tv5_A 380 ---GG-----------IFSG----LDALEKIEAGASVCQL-YSCLVF 407 (443)
T ss_dssp ---SS-----------CCSH----HHHHHHHHTTEEEEEE-SHHHHH
T ss_pred ---CC-----------CCCH----HHHHHHHHcCCCEEEE-cHHHHh
Confidence 11 1123 4555677899999998 454 44
No 98
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=88.87 E-value=5.9 Score=37.03 Aligned_cols=197 Identities=15% Similarity=0.145 Sum_probs=116.5
Q ss_pred chhHHHHHHHhhccc--ccEEEecCccccccChhHHHHHHHHHHh--CCceecC----CcHHHHHHHhCCchHHHHHHHH
Q 022982 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQ--HDVYVST----GDWAEHLIRNGPSAFKEYVEDC 110 (289)
Q Consensus 39 g~~~~~DlLe~ag~y--ID~lKfg~GTs~l~p~~~l~eKI~l~~~--~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~ 110 (289)
....++.+++.|-+- ==++-++-|+...++.+.+...+..+.+ ++|+|.. |.-+| .+..|
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e------------~~~~a 93 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFE------------SCEKA 93 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHH------------HHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHH------------HHHHH
Confidence 344555555544321 1135555555555555666666655544 6777774 43333 34456
Q ss_pred HHcCCCEEEecCCcccCCh--hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHH
Q 022982 111 KQVGFDTIELNVGSLEIPE--ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (289)
Q Consensus 111 k~lGF~~IEISdGti~i~~--~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I 188 (289)
-+.||+.|=|.--..++.+ +.=.++++.+...|.-|--|+|.= |-.+|.. ....- +....||++..
T Consensus 94 i~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~i------gG~Ed~~-----~~~~~-~~~yT~Peea~ 161 (307)
T 3n9r_A 94 VKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRL------MGIEDNI-----SVDEK-DAVLVNPKEAE 161 (307)
T ss_dssp HHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCC------CCC----------------CCSCCHHHHH
T ss_pred HHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeee------ccccCCc-----ccccc-cccCCCHHHHH
Confidence 7899999999655554332 122367788888999999999982 1122210 00000 00112688888
Q ss_pred HHHHHHHHccCcEEEEe---ccccccC--CCCccHHHHHHHHhccCCCceEEecC--CchhHHHHHHHhCCCccc--ccC
Q 022982 189 RRAERCLEAGADMIMID---SDDVCKH--ADSLRADIIAKVIGRLGLEKTMFEAT--NPRTSEWFIRRYGPKVNL--FVD 259 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiE---arGI~d~--~G~~r~d~v~~ii~~l~~eklifEAP--~k~qQ~~~I~~fG~~VNL--gI~ 259 (289)
+.+++ -|.|.+=+= +-|.|.. +-.++.|.+++|-+..+.- |.+=-- -|+.-+..|++||-++.= ||+
T Consensus 162 ~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~P-LVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p 237 (307)
T 3n9r_A 162 QFVKE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIP-LVLHGASAIPDNVRKSYLDAGGDLKGSKGVP 237 (307)
T ss_dssp HHHHH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSC-EEESSCCCCCHHHHHHHHHTTCCCTTCBCCC
T ss_pred HHHHH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCC-eEEeCCCCcchHHHHHHHHhcCccCCCCCCC
Confidence 87774 698876553 2389973 4578999999994322322 555433 367778889999998876 466
Q ss_pred CCCc
Q 022982 260 HSQV 263 (289)
Q Consensus 260 ~~eV 263 (289)
.+|+
T Consensus 238 ~e~i 241 (307)
T 3n9r_A 238 FEFL 241 (307)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 99
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=88.87 E-value=2.6 Score=38.31 Aligned_cols=142 Identities=11% Similarity=0.092 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gv-------g---------------- 78 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK-RIPVIAGT-------G---------------- 78 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC-------C----------------
Confidence 6788889888999999988654 3489999999999999873 2 11111233 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc--------c-----------------cccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD--------D-----------------VCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar--------G-----------------I~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- | ||+. .-++..+.+.++++
T Consensus 79 ----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~- 153 (291)
T 3a5f_A 79 ----SNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE- 153 (291)
T ss_dssp ----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT-
T ss_pred ----cccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc-
Confidence 114778899999999999999998652 1 4553 23577888888864
Q ss_pred cCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
..+|+- |+ .+-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 154 --~pnivgiK~s~gd~~~~~~~~~~~~~~f~v~-~G~d~~~~~~l~~G~~G 201 (291)
T 3a5f_A 154 --DKNIVAVXEASGNISQIAQIKALCGDKLDIY-SGNDDQIIPILALGGIG 201 (291)
T ss_dssp --STTEEEEEECSCCHHHHHHHHHHHGGGSEEE-ESCGGGHHHHHHTTCCE
T ss_pred --CCCEEEEeCCCCCHHHHHHHHHhcCCCeEEE-eCcHHHHHHHHHCCCCE
Confidence 345542 55 56677778888888766553 33455688899977544
No 100
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=88.84 E-value=1.3 Score=40.97 Aligned_cols=92 Identities=17% Similarity=0.260 Sum_probs=63.4
Q ss_pred cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHH
Q 022982 113 VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAE 192 (289)
Q Consensus 113 lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~ 192 (289)
-|.++|-|-|| ++....|+.+.++|..|.-.+|..-.. ...++.+.. .... ...+++|+.++
T Consensus 107 aGa~aVklEdg------~e~~~~I~al~~agIpV~gHiGLtPQs-------~~~~ggf~v----~grt-~~a~~~i~rA~ 168 (275)
T 1o66_A 107 AGAHMVKLEGG------VWMAETTEFLQMRGIPVCAHIGLTPQS-------VFAFGGYKV----QGRG-GKAQALLNDAK 168 (275)
T ss_dssp TTCSEEEEECS------GGGHHHHHHHHHTTCCEEEEEESCGGG-------TTC----------------CHHHHHHHHH
T ss_pred cCCcEEEECCc------HHHHHHHHHHHHcCCCeEeeeccCcee-------ecccCCeEE----EeCh-HHHHHHHHHHH
Confidence 89999999999 467889999999999988888873211 111111111 0001 23689999999
Q ss_pred HHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 193 RCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 193 ~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
+..+|||+.|.+|+- ..++.++|.+.+++-
T Consensus 169 a~~eAGA~~ivlE~v---------p~~~a~~it~~l~iP 198 (275)
T 1o66_A 169 AHDDAGAAVVLMECV---------LAELAKKVTETVSCP 198 (275)
T ss_dssp HHHHTTCSEEEEESC---------CHHHHHHHHHHCSSC
T ss_pred HHHHcCCcEEEEecC---------CHHHHHHHHHhCCCC
Confidence 999999999999982 245677777766643
No 101
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=88.63 E-value=0.55 Score=40.39 Aligned_cols=139 Identities=19% Similarity=0.260 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+++.++.++++||+.||+...... ++..+..++.+.+++.|+++.. ++.-.+.. ..|+.+
T Consensus 17 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~----~~~~~~------------ 79 (281)
T 3u0h_A 17 SLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLAN-LGLPLNLY----DSEPVF------------ 79 (281)
T ss_dssp CHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECC-EECCSCTT----SCHHHH------------
T ss_pred CHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEE-eccccccc----CCCHHH------------
Confidence 6889999999999999999865431 2345567788888999998754 33211110 011110
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccH-------HHHHHH---HhccCCCceEEecC-----------
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIAKV---IGRLGLEKTMFEAT----------- 238 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~-------d~v~~i---i~~l~~eklifEAP----------- 238 (289)
...++.+.+.++..-+.||..|.+-.- ......+. +.+.++ ++..|+ +|.+|.-
T Consensus 80 -~~~~~~~~~~i~~A~~lG~~~v~~~~~---p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~~~~~~~~~~~~ 154 (281)
T 3u0h_A 80 -LRELSLLPDRARLCARLGARSVTAFLW---PSMDEEPVRYISQLARRIRQVAVELLPLGM-RVGLEYVGPHHLRHRRYP 154 (281)
T ss_dssp -HHHHHTHHHHHHHHHHTTCCEEEEECC---SEESSCHHHHHHHHHHHHHHHHHHHGGGTC-EEEEECCCCGGGCCSSEE
T ss_pred -HHHHHHHHHHHHHHHHcCCCEEEEeec---CCCCCcchhhHHHHHHHHHHHHHHHHHcCC-EEEEEecccccccccccc
Confidence 011334445555556789999985321 11111111 222222 344555 4777842
Q ss_pred ---CchhHHHHHHHhCC-CcccccCCCC
Q 022982 239 ---NPRTSEWFIRRYGP-KVNLFVDHSQ 262 (289)
Q Consensus 239 ---~k~qQ~~~I~~fG~-~VNLgI~~~e 262 (289)
...+-..+++..|+ +|-+.+|+.+
T Consensus 155 ~~~~~~~~~~l~~~v~~~~vg~~~D~~h 182 (281)
T 3u0h_A 155 FVQSLADLKTFWEAIGAPNVGALVDSYH 182 (281)
T ss_dssp CCCSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred ccCCHHHHHHHHHHcCCCCeeEEeehhH
Confidence 45567789999985 5554344443
No 102
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=88.57 E-value=5 Score=36.08 Aligned_cols=70 Identities=19% Similarity=0.118 Sum_probs=47.9
Q ss_pred EEEecCccccccChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHc-CCCEEEecCCcccCChhHHH
Q 022982 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETLL 133 (289)
Q Consensus 56 ~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~l-GF~~IEISdGti~i~~~~r~ 133 (289)
.-|||.|++.+-++= ..++. |+ +.+..+++.++.++++ ||+.||+.-.. .. .++..
T Consensus 7 ~~~~~~~~w~~~~~~--------------~~f~~~g~------~~~~~~~e~l~~aa~~~G~~~VEl~~~~-~~-~~~~~ 64 (333)
T 3ktc_A 7 YPEFGAGLWHFANYI--------------DRYAVDGY------GPALSTIDQINAAKEVGELSYVDLPYPF-TP-GVTLS 64 (333)
T ss_dssp CCCEEEEGGGGSCCC--------------CSSSTTCS------SCCCCHHHHHHHHHHHSSEEEEEEEESC-ST-TCCHH
T ss_pred CCcceeeeeeeeccc--------------ccccCCCC------CCCCCHHHHHHHHHHhCCCCEEEecCCC-cc-hhHHH
Confidence 358888888876521 22221 22 1134799999999999 99999996111 11 35667
Q ss_pred HHHHHHHHcCCccc
Q 022982 134 RYVRLVKSAGLKAK 147 (289)
Q Consensus 134 ~lI~~~~~~G~~v~ 147 (289)
++-+.+++.|+++.
T Consensus 65 ~l~~~l~~~Gl~i~ 78 (333)
T 3ktc_A 65 EVKDALKDAGLKAI 78 (333)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCeEE
Confidence 78888999999874
No 103
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.47 E-value=2.4 Score=38.57 Aligned_cols=141 Identities=11% Similarity=0.061 Sum_probs=95.6
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCc---ccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 102 AFKEYVEDCKQ-VGFDTIELNVGS---LEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
.+.++++++-+ -|.+.|=+.-.| ..|+.++|.++++.+.+. | ++.-=.|+ |
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv-------g--------------- 81 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQV-------G--------------- 81 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC-------C---------------
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEec-------C---------------
Confidence 57888999888 999999886543 579999999999999873 1 11111222 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .| ++..+.+.++++
T Consensus 82 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 82 -----SVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp -----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 114778899999999999999998652 15663 34 677888888874
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
..+|+- |+ .+-.+...+++. +++..+.--.+ -+.+++|..|--|
T Consensus 157 ---~pnIvgiK~s~gd~~~~~~~~~~-~~~f~v~~G~d-~~~~~~l~~G~~G 203 (293)
T 1f6k_A 157 ---NPKVLGVKFTAGDFYLLERLKKA-YPNHLIWAGFD-EMMLPAASLGVDG 203 (293)
T ss_dssp ---STTEEEEEECSCCHHHHHHHHHH-CTTSEEEECCG-GGHHHHHHTTCSE
T ss_pred ---CCCEEEEEECCCCHHHHHHHHHh-CCCeEEEECcH-HHHHHHHHCCCcE
Confidence 345542 44 455666666666 56655543333 3578888877544
No 104
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=88.44 E-value=4.6 Score=38.07 Aligned_cols=146 Identities=14% Similarity=0.223 Sum_probs=93.9
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 105 EYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
+.+..|-+.||+.|=|.--. +|.++= .++++.+...|.-|--|+|.= |..+|.. . -.+ .
T Consensus 89 e~i~~ai~~GFtSVMiDgS~--~p~eENi~~Tk~vv~~ah~~gvsVEaELG~v------gg~Ed~v-----~---~~~-~ 151 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMIDASH--HPFDENVRITKEVVAYAHARSVSVEAELGTL------GGIEEDV-----Q---NTV-Q 151 (323)
T ss_dssp HHHHHHHHTTCSEEEECCTT--SCHHHHHHHHHHHHHHHHTTTCEEEEEESCC------------------------C-C
T ss_pred HHHHHHHHcCCCeEEecCCC--CCHHHHHHHHHHHHHHHHHcCCeEEEEeCCc------cCCccCc-----c---ccc-c
Confidence 45777889999999886554 454443 367788888999999999982 1112210 0 000 1
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEec---ccccc--CCCC--ccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCC
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDS---DDVCK--HADS--LRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGP 252 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEa---rGI~d--~~G~--~r~d~v~~ii~~l~~eklifEAP-~k~qQ~~~I~~fG~ 252 (289)
..||++..+.+++ -|.|.+=+== -|.|. .+-. ++.|.+++|-+.++.-=++==+. -|+..+..|+.||-
T Consensus 152 yTdPeea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg 228 (323)
T 2isw_A 152 LTEPQDAKKFVEL---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGG 228 (323)
T ss_dssp CCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHH---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhcc
Confidence 1268888888774 6888665432 28998 4434 78999999988886443443333 57778889999999
Q ss_pred Cccc--ccCCCCchhhhhhhcc
Q 022982 253 KVNL--FVDHSQVMDLECLRGR 272 (289)
Q Consensus 253 ~VNL--gI~~~eVl~LE~LR~g 272 (289)
++.= ||+.+|+- +|.+.|
T Consensus 229 ~~~~~~Gvp~e~i~--~ai~~G 248 (323)
T 2isw_A 229 KMPDAVGVPIESIV--HAIGEG 248 (323)
T ss_dssp CCTTCBCCCHHHHH--HHHHTT
T ss_pred ccccCCCCCHHHHH--HHHHCC
Confidence 9876 47766653 344444
No 105
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=88.41 E-value=1.1 Score=41.22 Aligned_cols=93 Identities=17% Similarity=0.291 Sum_probs=64.3
Q ss_pred cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHH
Q 022982 113 VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAE 192 (289)
Q Consensus 113 lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~ 192 (289)
-|.++|-|-|| ++....|+.+.++|..|.-.+|..-. ....++.+....+ .....+++|+.++
T Consensus 106 aGa~aVklEgg------~e~~~~I~al~~agipV~gHiGLtPq-------~v~~~ggf~v~gr----t~~~a~~~i~rA~ 168 (264)
T 1m3u_A 106 AGANMVKIEGG------EWLVETVQMLTERAVPVCGHLGLTPQ-------SVNIFGGYKVQGR----GDEAGDQLLSDAL 168 (264)
T ss_dssp TTCSEEECCCS------GGGHHHHHHHHHTTCCEEEEEESCGG-------GHHHHTSSCCCCC----SHHHHHHHHHHHH
T ss_pred cCCCEEEECCc------HHHHHHHHHHHHCCCCeEeeecCCce-------eecccCCeEEEeC----CHHHHHHHHHHHH
Confidence 89999999999 46788999999999888888887321 1111111111000 0112589999999
Q ss_pred HHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 193 RCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 193 ~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
+..+|||+.|.+|+- ..++.++|.+.+++-
T Consensus 169 a~~eAGA~~ivlE~v---------p~~~a~~it~~l~iP 198 (264)
T 1m3u_A 169 ALEAAGAQLLVLECV---------PVELAKRITEALAIP 198 (264)
T ss_dssp HHHHHTCCEEEEESC---------CHHHHHHHHHHCSSC
T ss_pred HHHHCCCcEEEEecC---------CHHHHHHHHHhCCCC
Confidence 999999999999982 245677777766643
No 106
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=88.37 E-value=6.3 Score=32.87 Aligned_cols=102 Identities=16% Similarity=0.281 Sum_probs=66.3
Q ss_pred hhHHHHHHHhhccc----ccEEEecCccccccChhHHHHHHHHHHhCCcee--cC-CcHHHHHHHhCCchHHHHHHHHHH
Q 022982 40 HNVLEDIFESMGQF----VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--ST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (289)
Q Consensus 40 ~~~~~DlLe~ag~y----ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v--~~-GtlfE~a~~qg~~~~~~yl~~~k~ 112 (289)
+..+.+.++...++ ++.+-|++|.-.+.| +.|.+.++.++++|+.+ .+ |++++ .++.+ +.+.+
T Consensus 52 ~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~-~~l~~l~~~~~~~~~~i~i~Tng~~~~-----~~~~~----~~l~~ 121 (245)
T 3c8f_A 52 VEDLMKEVVTYRHFMNASGGGVTASGGEAILQA-EFVRDWFRACKKEGIHTCLDTNGFVRR-----YDPVI----DELLE 121 (245)
T ss_dssp HHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGH-HHHHHHHHHHHTTTCCEEEEECCCCCC-----CCHHH----HHHHH
T ss_pred HHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCH-HHHHHHHHHHHHcCCcEEEEeCCCcCc-----CHHHH----HHHHH
Confidence 44555566555544 578899999988865 56899999999998854 34 64422 11233 33444
Q ss_pred cCCCEEEecCCccc---------CChhHHHHHHHHHHHcCCcccceeee
Q 022982 113 VGFDTIELNVGSLE---------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 113 lGF~~IEISdGti~---------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
. ++.|-||=-+.+ .+.+...+.|+.+++.|+.+.-.+.+
T Consensus 122 ~-~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~~ 169 (245)
T 3c8f_A 122 V-TDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVV 169 (245)
T ss_dssp T-CSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred h-CCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHHhcCCEEEEEEee
Confidence 4 678888754431 34467778999999999865444333
No 107
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=88.34 E-value=1.3 Score=42.03 Aligned_cols=141 Identities=13% Similarity=0.101 Sum_probs=98.8
Q ss_pred ccEEEecCccccccCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022982 54 VDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (289)
Q Consensus 54 ID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (289)
+|.+-+-..+|-++.+ +.+++-++.++++|..|..+ .|.+...+|+.+-+..+.+.+.|.+.|-+.|
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~--~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~D 178 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFS--CEDALRSEIDFLAEICGAVIEAGATTINIPD 178 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEE--EETGGGSCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEe--cCCCCccCHHHHHHHHHHHHHcCCCEEEecC
Confidence 5666666666655432 23455788999999877654 2333445556777888889999999999999
Q ss_pred CcccCChhHHHHHHHHHHHcCCcc--cceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCc
Q 022982 123 GSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (289)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v--~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~ 200 (289)
-.--+.+.+-.++|+.++++ +.. .-.+++.+. . |...-+-.+-..++|||+
T Consensus 179 T~G~~~P~~~~~lv~~l~~~-~~~~~~~~l~~H~H-n-------------------------d~GlAvAN~laAv~aGa~ 231 (370)
T 3rmj_A 179 TVGYSIPYKTEEFFRELIAK-TPNGGKVVWSAHCH-N-------------------------DLGLAVANSLAALKGGAR 231 (370)
T ss_dssp SSSCCCHHHHHHHHHHHHHH-STTGGGSEEEEECB-C-------------------------TTSCHHHHHHHHHHTTCC
T ss_pred ccCCcCHHHHHHHHHHHHHh-CCCcCceEEEEEeC-C-------------------------CCChHHHHHHHHHHhCCC
Confidence 99999999999999999885 111 123555331 1 122236777889999999
Q ss_pred EEEEecc--ccccCCCCccHHHHHHHH
Q 022982 201 MIMIDSD--DVCKHADSLRADIIAKVI 225 (289)
Q Consensus 201 ~ViiEar--GI~d~~G~~r~d~v~~ii 225 (289)
.| ++- |+=+..||.-.+.+-..+
T Consensus 232 ~v--d~tv~GlGeraGN~~lE~vv~~L 256 (370)
T 3rmj_A 232 QV--ECTVNGLGERAGNASVEEIVMAL 256 (370)
T ss_dssp EE--EEBGGGCSSTTCBCBHHHHHHHH
T ss_pred EE--EEeccccCcccccccHHHHHHHH
Confidence 65 664 888899999988765544
No 108
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=88.25 E-value=2.5 Score=38.54 Aligned_cols=143 Identities=16% Similarity=0.130 Sum_probs=98.5
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv-------g--------------- 77 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGA-------G--------------- 77 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC-------C---------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcc-------C---------------
Confidence 36788899999999999987543 3489999999999999873 2 11111233 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.++++
T Consensus 78 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 78 -----SNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 114778899999999999999998652 15663 23577888888874
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
. .+|+- |+ ++-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 153 -~--pnIvgiKds~gd~~~~~~~~~~~~~~f~v~-~G~d~~~l~~l~~G~~G 200 (297)
T 2rfg_A 153 -L--PRIVGVKDATTDLARISRERMLINKPFSFL-SGDDMTAIAYNASGGQG 200 (297)
T ss_dssp -S--TTEEEEEECSCCTTHHHHHHTTCCSCCEEE-ESCGGGHHHHHHTTCCE
T ss_pred -C--CCEEEEEeCCCCHHHHHHHHHhcCCCEEEE-eCcHHHHHHHHHCCCCE
Confidence 3 45542 55 46667777787777766553 33455678888877444
No 109
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=88.19 E-value=2.6 Score=39.04 Aligned_cols=92 Identities=21% Similarity=0.315 Sum_probs=63.7
Q ss_pred HHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 108 EDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 108 ~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+..-+.|..+|-|-||.. -+|.++.++-|+.+++.+- .+.|-++- ..|.. +
T Consensus 101 ~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~--~~~~~i~a-------Rtda~---------~ 162 (295)
T 1xg4_A 101 KSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMA-------RTDAL---------A 162 (295)
T ss_dssp HHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS--STTSEEEE-------EECCH---------H
T ss_pred HHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc--CCCcEEEE-------ecHHh---------h
Confidence 333457999999999862 4788888888888888643 23333321 11110 0
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
....++.|++++...+||||.|.+|+. . ..+++.+|.+.++
T Consensus 163 ----~~gl~~ai~ra~ay~eAGAd~i~~e~~--~------~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 163 ----VEGLDAAIERAQAYVEAGAEMLFPEAI--T------ELAMYRQFADAVQ 203 (295)
T ss_dssp ----HHCHHHHHHHHHHHHHTTCSEEEETTC--C------SHHHHHHHHHHHC
T ss_pred ----hcCHHHHHHHHHHHHHcCCCEEEEeCC--C------CHHHHHHHHHHcC
Confidence 123689999999999999999999985 1 3567777777666
No 110
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=88.19 E-value=2.5 Score=38.93 Aligned_cols=163 Identities=13% Similarity=0.005 Sum_probs=101.7
Q ss_pred CCceecCCcHHHH-HHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCC
Q 022982 82 HDVYVSTGDWAEH-LIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNK 156 (289)
Q Consensus 82 ~gV~v~~GtlfE~-a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~ 156 (289)
.||.+..=|.|-- --.=+.+.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 13 ~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv---- 88 (316)
T 3e96_A 13 ETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI---- 88 (316)
T ss_dssp SSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----
T ss_pred CceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----
Confidence 4665555454411 001112368889999999999999776543 589999999999999884 1011111222
Q ss_pred CCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------cccc
Q 022982 157 SDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCK 211 (289)
Q Consensus 157 ~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d 211 (289)
| . +..+.|++++..-++|||.|++=.- -+|+
T Consensus 89 ---g--------------------~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 89 ---G--------------------Y-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp ---C--------------------S-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred ---C--------------------c-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 1 1 3677899999999999999998531 1576
Q ss_pred CCCCccHHHHHHHHhccCCCceE--Eec-CCchhHHHHHHHhCC-Ccc-cccCCCCchhhhhhhcccCC
Q 022982 212 HADSLRADIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRYGP-KVN-LFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 212 ~~G~~r~d~v~~ii~~l~~ekli--fEA-P~k~qQ~~~I~~fG~-~VN-LgI~~~eVl~LE~LR~g~~G 275 (289)
..-++..+.+.+++ +.| +|+ =|+ ++-.+...+++..++ +.. +.--.++.+.++.|..|--|
T Consensus 145 ~g~~l~~~~~~~La-~~p--nIvgiKdssgd~~~~~~~~~~~~~~~f~~v~~G~d~~~~~~~l~~G~~G 210 (316)
T 3e96_A 145 KDPEISDRVLVDLA-PLQ--NLVGVKYAINDLPRFAKVVRSIPEEHQIAWICGTAEKWAPFFWHAGAKG 210 (316)
T ss_dssp CCTTSCTHHHHHHT-TCT--TEEEEEECCCCHHHHHHHHTTSCGGGCCEEEETTCTTTHHHHHHHTCCE
T ss_pred CCCCCCHHHHHHHH-cCC--CEEEEEeCCCCHHHHHHHHHhcCCCCceEEEeCChHHHHHHHHHCCCCE
Confidence 53466777777776 343 332 233 456666777777776 555 44344455556666655433
No 111
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=88.17 E-value=1.5 Score=40.36 Aligned_cols=148 Identities=14% Similarity=0.162 Sum_probs=87.3
Q ss_pred HHHHHHhhcccccEEEecCccccc-cCh-hHHHHHHHHHHh-CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 43 LEDIFESMGQFVDGLKFSGGSHSL-MPK-PFIEEVVKRAHQ-HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GTs~l-~p~-~~l~eKI~l~~~-~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
+-+.|..+| ||.+=.||+.+.- .|. ..-.+.++.+++ -++.+. .| .++ .+=++.+.+.|.+.|-
T Consensus 33 i~~~L~~~G--v~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~--~l-----~~~----~~~i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 33 WINQLSRTG--LSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYA--AL-----VPN----QRGLENALEGGINEAC 99 (307)
T ss_dssp HHHHHHTTT--CSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEE--EE-----CCS----HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHcC--CCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEE--EE-----eCC----HHhHHHHHhCCcCEEE
Confidence 344556666 7888888765431 110 012233333222 133222 12 233 2236777778999999
Q ss_pred ecCCcccC--------Ch----hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHH
Q 022982 120 LNVGSLEI--------PE----ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (289)
Q Consensus 120 ISdGti~i--------~~----~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
|...+-++ +. +.-.+.|+.+++.|++|-..+..-+ +...+ +..|++.+
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~-----~~~~~---------------~~~~~~~~ 159 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVF-----GCPYE---------------KDVPIEQV 159 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTT-----CBTTT---------------BCCCHHHH
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEe-----cCCcC---------------CCCCHHHH
Confidence 97644332 22 3346789999999998743322211 11111 11268999
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
++.+++..++||+.|. |.|..|-..+..+.++++.+
T Consensus 160 ~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~l 195 (307)
T 1ydo_A 160 IRLSEALFEFGISELS-----LGDTIGAANPAQVETVLEAL 195 (307)
T ss_dssp HHHHHHHHHHTCSCEE-----EECSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEE-----EcCCCCCcCHHHHHHHHHHH
Confidence 9999999999999664 56888888888877777543
No 112
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=88.12 E-value=1.6 Score=40.86 Aligned_cols=105 Identities=21% Similarity=0.349 Sum_probs=64.3
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCc-------------ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccc
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGS-------------LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDR 165 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGt-------------i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~ 165 (289)
|+.+.+..+.+++.|||.|||+-|+ +.-..+.-.++|+.+++. ++ | +++|... | -+|.
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~---P-V~vKiR~---g-~~~~ 140 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRV---P-VTVKMRL---G-LEGK 140 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSS---C-EEEEEES---C-BTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCC---c-eEEEEec---C-cCcc
Confidence 3467777778888999999999652 233445556677777763 32 2 5555321 1 0110
Q ss_pred ccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc----ccccC----CCCccHHHHHHHHhcc
Q 022982 166 AFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD----DVCKH----ADSLRADIIAKVIGRL 228 (289)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar----GI~d~----~G~~r~d~v~~ii~~l 228 (289)
.+.++.++.++...++|++.|+|-+| |+.-. ......+.+.++.+.+
T Consensus 141 ----------------~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~ 195 (350)
T 3b0p_A 141 ----------------ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDF 195 (350)
T ss_dssp ----------------CCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHC
T ss_pred ----------------ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhC
Confidence 13566788888888999999999987 22111 1123566777776655
No 113
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.08 E-value=2.9 Score=37.90 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=96.4
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv-------g--------------- 77 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA-------G--------------- 77 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC-------C---------------
Confidence 36788889989999999988654 3479999999999999873 2 11111233 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.++++
T Consensus 78 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (289)
T 2yxg_A 78 -----SNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAE 152 (289)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHH
Confidence 114778899999999999999998652 15663 23577888888873
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+. .+|+- |+ ++-.+...+++.. +..+ ..-+|-+.+++|..|--|
T Consensus 153 ~~--pnivgiK~s~gd~~~~~~~~~~~--~f~v-~~G~d~~~~~~l~~G~~G 199 (289)
T 2yxg_A 153 EY--SNISAVKEANPNLSQVSELIHDA--KITV-LSGNDELTLPIIALGGKG 199 (289)
T ss_dssp HC--TTEEEEEECCSCTHHHHHHHHHT--CSEE-EESCGGGHHHHHHTTCCE
T ss_pred hC--CCEEEEEeCCCCHHHHHHHHHhC--CeEE-EECcHHHHHHHHHCCCCE
Confidence 44 44532 55 4566666777765 3333 444566788888877444
No 114
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.07 E-value=2.8 Score=38.35 Aligned_cols=142 Identities=17% Similarity=0.120 Sum_probs=90.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv-------g--------------- 88 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG-KIKLIAHV-------G--------------- 88 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C---------------
Confidence 36888999999999999988654 3489999999999999873 1 11111122 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc---------------------c-----cccC---CC-CccHHHHHHHH
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD---------------------D-----VCKH---AD-SLRADIIAKVI 225 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar---------------------G-----I~d~---~G-~~r~d~v~~ii 225 (289)
..+..+.|++++..-++|||.|++=.- + ||+. .| ++..+.+.+++
T Consensus 89 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La 163 (303)
T 2wkj_A 89 -----CVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLV 163 (303)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 114778899999999999999998652 1 3442 23 46677777776
Q ss_pred hccCCCceEE--ecC-CchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 226 GRLGLEKTMF--EAT-NPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 226 ~~l~~eklif--EAP-~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+ ..+|+- |+. +-.+...+++. ++++.+.--. |-+.+++|..|--|
T Consensus 164 ~---~pnIvgiK~s~gd~~~~~~~~~~-~~~f~v~~G~-d~~~~~~l~~G~~G 211 (303)
T 2wkj_A 164 T---LPGVGALXQTSGDLYQMEQIRRE-HPDLVLYNGY-DNIFASGLLAGADG 211 (303)
T ss_dssp T---STTEEEEEECCCCHHHHHHHHHH-CTTCEEEECC-GGGHHHHHHHTCCE
T ss_pred c---CCCEEEEeCCCCCHHHHHHHHHh-CCCeEEEeCc-HHHHHHHHHCCCCE
Confidence 3 244432 443 44455555555 5554443323 33467777765433
No 115
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.02 E-value=2.1 Score=39.81 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=66.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
..++++.|.+.|.+.|-|.+-.-++ +.-.+.|+.+++.|+.| ++...+.. ..
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v--~~~~~~a~------------------------~~ 146 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVATHCTEA--DVSKQHIEYARNLGMDT--VGFLMMSH------------------------MI 146 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEE--EEEEESTT------------------------SS
T ss_pred cHHHHHHHHhCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEE--EEEEEeCC------------------------CC
Confidence 4678999999999999997422221 45568999999999875 44442210 11
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
+++.+.+.++...++||+.|- |.|-.|-..+..+.++++.
T Consensus 147 ~~e~~~~ia~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~ 186 (345)
T 1nvm_A 147 PAEKLAEQGKLMESYGATCIY-----MADSGGAMSMNDIRDRMRA 186 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEE-----EECTTCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEE-----ECCCcCccCHHHHHHHHHH
Confidence 588899999999999999764 5677777777777766643
No 116
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=88.02 E-value=1.7 Score=38.78 Aligned_cols=47 Identities=19% Similarity=0.351 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+++.++.++++||+.||+....- .....+..++-+.+++.|+++.+
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~ 77 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIIS 77 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEE
Confidence 699999999999999999985211 02233456777888999999754
No 117
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=87.96 E-value=2.5 Score=38.22 Aligned_cols=76 Identities=16% Similarity=0.145 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ +|+ | .
T Consensus 20 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi--~Gv-------g--~--------------- 73 (286)
T 2r91_A 20 LFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVI--VQV-------A--S--------------- 73 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEE--Eee-------C--C---------------
Confidence 67888999999999999886543 47999999999999988411111 222 1 0
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
.+..+.|++++..-++|||.|++=.
T Consensus 74 ---~~t~~ai~la~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 74 ---LNADEAIALAKYAESRGAEAVASLP 98 (286)
T ss_dssp ---SSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 1377889999999999999999854
No 118
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=87.83 E-value=2.4 Score=38.26 Aligned_cols=77 Identities=3% Similarity=-0.043 Sum_probs=47.1
Q ss_pred hHHHHHHHhhccc-cc---EEEecCcccc-------ccChhHHHHHHHHHHhC-CceecC---CcHHHHHHHhCCchHHH
Q 022982 41 NVLEDIFESMGQF-VD---GLKFSGGSHS-------LMPKPFIEEVVKRAHQH-DVYVST---GDWAEHLIRNGPSAFKE 105 (289)
Q Consensus 41 ~~~~DlLe~ag~y-ID---~lKfg~GTs~-------l~p~~~l~eKI~l~~~~-gV~v~~---GtlfE~a~~qg~~~~~~ 105 (289)
..+.+..+.+-++ +| ++=+.++|-. -.+.+.+.+.++-.++. ++++.- .+| ..+.+.+
T Consensus 106 ~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-------~~~~~~~ 178 (314)
T 2e6f_A 106 EENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYF-------DIAHFDT 178 (314)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCC-------CHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCC-------CHHHHHH
Confidence 3444443333333 46 6666665332 22556677888877765 654432 122 1125777
Q ss_pred HHHHHHHcC-CCEEEecCCc
Q 022982 106 YVEDCKQVG-FDTIELNVGS 124 (289)
Q Consensus 106 yl~~~k~lG-F~~IEISdGt 124 (289)
+.+.+.+.| .|.|-+++.+
T Consensus 179 ~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 179 AAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp HHHHHHTCTTEEEEEECCCE
T ss_pred HHHHHHhcCCceEEEEeCCC
Confidence 888999999 9999999977
No 119
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.81 E-value=0.61 Score=43.55 Aligned_cols=121 Identities=19% Similarity=0.291 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhC-------CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHHHH
Q 022982 71 FIEEVVKRAHQH-------DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRYVR 137 (289)
Q Consensus 71 ~l~eKI~l~~~~-------gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i--~~~~r~~lI~ 137 (289)
.+.|.|+-.++. +|++++..|.+--+ ..+...++.+.+.+.|.|+|+||+|... + ++.....+++
T Consensus 204 ~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~--~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 281 (349)
T 3hgj_A 204 FPLQVAQAVREVVPRELPLFVRVSATDWGEGGW--SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFAD 281 (349)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSC--CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccccccCCCC--CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHH
Confidence 456666666653 34566643332100 0113445667777889999999987542 1 2323456677
Q ss_pred HHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCc
Q 022982 138 LVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSL 216 (289)
Q Consensus 138 ~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~ 216 (289)
.+++. +++. .--+| .+. | .+.+++.|++| ||.|++ +|.+..
T Consensus 282 ~ir~~-------~~iP--Vi~~G--------gi~-----------t----~e~a~~~l~~G~aD~V~i-GR~~la----- 323 (349)
T 3hgj_A 282 AVRKR-------VGLR--TGAVG--------LIT-----------T----PEQAETLLQAGSADLVLL-GRVLLR----- 323 (349)
T ss_dssp HHHHH-------HCCE--EEECS--------SCC-----------C----HHHHHHHHHTTSCSEEEE-STHHHH-----
T ss_pred HHHHH-------cCce--EEEEC--------CCC-----------C----HHHHHHHHHCCCceEEEe-cHHHHh-----
Confidence 77763 2211 10011 111 1 46677889999 999998 676653
Q ss_pred cHHHHHHHHhccCCC
Q 022982 217 RADIIAKVIGRLGLE 231 (289)
Q Consensus 217 r~d~v~~ii~~l~~e 231 (289)
+.|++.++.+.++.+
T Consensus 324 nPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 324 DPYFPLRAAKALGVA 338 (349)
T ss_dssp CTTHHHHHHHHTTCC
T ss_pred CchHHHHHHHHCCCC
Confidence 257889999888843
No 120
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=87.74 E-value=3.6 Score=37.58 Aligned_cols=143 Identities=14% Similarity=0.148 Sum_probs=99.6
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv-------g--------------- 89 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGT-------G--------------- 89 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCC-------C---------------
Confidence 36888899999999999988654 3489999999999999873 1 11111222 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.++++
T Consensus 90 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 90 -----SNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 114778899999999999999998652 15663 23577888888874
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
..+|+- |+ .+-.+...+++..+++..+. .-+|-+.+++|..|--|
T Consensus 165 ---~pnIvgiKdssgd~~~~~~~~~~~~~~f~v~-~G~d~~~l~~l~~G~~G 212 (301)
T 1xky_A 165 ---IENIVAIKDAGGDVLTMTEIIEKTADDFAVY-SGDDGLTLPAMAVGAKG 212 (301)
T ss_dssp ---STTEEEEEECSSCHHHHHHHHHHSCTTCEEE-ESSGGGHHHHHHTTCCE
T ss_pred ---CCCEEEEEcCCCCHHHHHHHHHhcCCCeEEE-ECcHHHHHHHHHcCCCE
Confidence 345543 44 46667777888888776654 33455688888877544
No 121
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=87.68 E-value=2.3 Score=37.41 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=85.1
Q ss_pred hhHHHHHHHhhcccccEEEecCccccccCh---hHHHHHHHHHHhCCceecCC----cHHHHHHHh--CCchHHHHHHHH
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVSTG----DWAEHLIRN--GPSAFKEYVEDC 110 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~l~p~---~~l~eKI~l~~~~gV~v~~G----tlfE~a~~q--g~~~~~~yl~~~ 110 (289)
....+..++.-.+.||+. +-.|+. ..+ +.+++-++++|++|+++... |. + . .. .++.+.+..+.+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~-l~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~-~-l-~~~~~~~~~~~~a~~a 175 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIH-VNVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMMYPRGK-H-I-QNERDPELVAHAARLG 175 (273)
T ss_dssp CSCHHHHHHTTCSEEEEE-EEETST--THHHHHHHHHHHHHHHHHHTCCEEEEEEECST-T-C-SCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEE-EecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCc-c-c-CCCCCHhHHHHHHHHH
Confidence 447788888777777552 222322 111 25788899999999866542 11 0 0 00 112455555888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
.+.|.|+|=+|.. .+ .++++.+++. ...++..=|+. ..+.+++.+
T Consensus 176 ~~~Gad~i~~~~~---~~----~~~l~~i~~~~~ipvva~GGi~---------------------------~~~~~~~~~ 221 (273)
T 2qjg_A 176 AELGADIVKTSYT---GD----IDSFRDVVKGCPAPVVVAGGPK---------------------------TNTDEEFLQ 221 (273)
T ss_dssp HHTTCSEEEECCC---SS----HHHHHHHHHHCSSCEEEECCSC---------------------------CSSHHHHHH
T ss_pred HHcCCCEEEECCC---CC----HHHHHHHHHhCCCCEEEEeCCC---------------------------CCCHHHHHH
Confidence 9999999999952 22 2445555442 22222222220 013677888
Q ss_pred HHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
.++..+++||+.|++ ++.|+.+.. + ...+.++.+
T Consensus 222 ~~~~~~~~Ga~gv~v-g~~i~~~~~-~-~~~~~~l~~ 255 (273)
T 2qjg_A 222 MIKDAMEAGAAGVAV-GRNIFQHDD-V-VGITRAVCK 255 (273)
T ss_dssp HHHHHHHHTCSEEEC-CHHHHTSSS-H-HHHHHHHHH
T ss_pred HHHHHHHcCCcEEEe-eHHhhCCCC-H-HHHHHHHHH
Confidence 899999999999999 888887652 2 334444443
No 122
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=87.61 E-value=4.8 Score=36.46 Aligned_cols=145 Identities=11% Similarity=0.082 Sum_probs=99.4
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.++++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+. +=++.-=+|+ |
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-------g---------------- 78 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT-------G---------------- 78 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC-------C----------------
Confidence 3678889999999999996654433 78999999999999884 1011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -+|+. .-++..+.+.+++ +
T Consensus 79 ----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La-~ 153 (291)
T 3tak_A 79 ----ANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLA-E 153 (291)
T ss_dssp ----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHT-T
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHH-c
Confidence 114788899999999999999998762 15653 2367778888887 3
Q ss_pred cCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCCC
Q 022982 228 LGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLGK 276 (289)
Q Consensus 228 l~~ekli--fEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G~ 276 (289)
.| +|+ =|+ .+..+...++++.+++..+.- -+|-+.+++|..|--|-
T Consensus 154 ~p--nivgiK~ssgd~~~~~~~~~~~~~~f~v~~-G~d~~~~~~l~~G~~G~ 202 (291)
T 3tak_A 154 IP--NIVGIKDATGDVPRGKALIDALNGKMAVYS-GDDETAWELMLLGADGN 202 (291)
T ss_dssp ST--TEEEEEECSCCHHHHHHHHHHHTTSSEEEE-CCHHHHHHHHHTTCCEE
T ss_pred CC--CEEEEEeCCCCHHHHHHHHHHcCCCeEEEE-CcHHHHHHHHHCCCCEE
Confidence 43 332 244 566777788888888877743 33556788888775443
No 123
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=87.54 E-value=2.5 Score=38.36 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=.|+ |
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv-------g---------------- 78 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGT-------G---------------- 78 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C----------------
Confidence 6788888888899999988654 3489999999999999873 2 11111233 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -||+. .| ++..+.+.++++
T Consensus 79 ----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~- 153 (292)
T 2ojp_A 79 ----ANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK- 153 (292)
T ss_dssp ----CSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT-
T ss_pred ----CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc-
Confidence 114778899999999999999998652 15663 23 577888888874
Q ss_pred cCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
..+|+- |+ ++-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 154 --~pnivgiK~s~gd~~~~~~~~~~~~~~f~v~-~G~d~~~~~~l~~G~~G 201 (292)
T 2ojp_A 154 --VKNIIGIXEATGNLTRVNQIKELVSDDFVLL-SGDDASALDFMQYGGHG 201 (292)
T ss_dssp --STTEEEC-CCSCCTHHHHHHHTTSCTTSBCE-ESCGGGHHHHHHTTCCE
T ss_pred --CCCEEEEeCCCCCHHHHHHHHHhcCCCEEEE-ECcHHHHHHHHHCCCcE
Confidence 345543 44 45667777777777766654 23345568888877444
No 124
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=87.50 E-value=3.1 Score=38.14 Aligned_cols=144 Identities=11% Similarity=0.115 Sum_probs=99.6
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=.|+ |
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv-------g--------------- 89 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGA-------G--------------- 89 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcC-------C---------------
Confidence 36888999999999999988654 3489999999999999873 1 11111222 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .| ++..+.+.++++
T Consensus 90 -----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (306)
T 1o5k_A 90 -----TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAA 164 (306)
T ss_dssp -----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHH
Confidence 114778899999999999999998652 15663 23 678888888874
Q ss_pred ccCCCceEE--ec-CCchhHHHHHHHhCC---CcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTMF--EA-TNPRTSEWFIRRYGP---KVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~eklif--EA-P~k~qQ~~~I~~fG~---~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+. .+|+- |+ ++-.+...+++..++ ++.+. .-+|-+.+++|..|--|
T Consensus 165 ~~--pnIvgiKdssgd~~~~~~~~~~~~~~~~~f~v~-~G~d~~~l~~l~~G~~G 216 (306)
T 1o5k_A 165 DL--KNVVGIXEANPDIDQIDRTVSLTKQARSDFMVW-SGNDDRTFYLLCAGGDG 216 (306)
T ss_dssp HC--TTEEEEEECCCCHHHHHHHHHHHHHHCTTCEEE-ESSGGGHHHHHHHTCCE
T ss_pred hC--CCEEEEeCCCCCHHHHHHHHHhcCCCCCcEEEE-ECcHHHHHHHHHCCCCE
Confidence 34 45543 44 466677778887765 65553 33455688888876444
No 125
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=87.46 E-value=2.5 Score=39.67 Aligned_cols=87 Identities=17% Similarity=0.210 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc--c----------------cCChhHHHH----HHHHHHHcCCcccce--eeeecCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS--L----------------EIPEETLLR----YVRLVKSAGLKAKPK--FAVMFNKS 157 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt--i----------------~i~~~~r~~----lI~~~~~~G~~v~~E--~g~k~~~~ 157 (289)
.|-+--+.|++.|||.|||.-+. + -=+.+.|.| +|+.+++. +-++ +++|..
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a---vg~d~pV~vRis-- 233 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREV---WPENLPLTARFG-- 233 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTT---SCTTSCEEEEEE--
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHH---cCCCceEEEEec--
Confidence 34444456778899999998542 1 013455654 55555553 1111 455432
Q ss_pred CCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc
Q 022982 158 DIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD 208 (289)
Q Consensus 158 evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG 208 (289)
|..|...+..+.++.++.++..-++|+++|-+=+.+
T Consensus 234 ---------------~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~ 269 (363)
T 3l5l_A 234 ---------------VLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGF 269 (363)
T ss_dssp ---------------EECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred ---------------chhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 222222221257888999999999999999886543
No 126
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=87.37 E-value=4 Score=37.23 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=98.1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. |-++.-=+|+ |
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv-------g--------------- 85 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA-------G--------------- 85 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC-------C---------------
Confidence 468889999999999999775433 479999999999999884 2011111122 1
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHh
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIG 226 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.++++
T Consensus 86 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 86 -----SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFR 160 (301)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHh
Confidence 114778899999999999999999762 15653 34677888888875
Q ss_pred ccC-CCceEEecCCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLG-LEKTMFEATNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~-~eklifEAP~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
..| +-=+=...++-.+...+++.. +++.+. .-+|-+.+++|..|--|
T Consensus 161 ~~pnivgiKdssgd~~~~~~~~~~~-~~f~v~-~G~d~~~~~~l~~G~~G 208 (301)
T 3m5v_A 161 DCENIYGVKEASGNIDKCVDLLAHE-PRMMLI-SGEDAINYPILSNGGKG 208 (301)
T ss_dssp HCTTEEEEEECSSCHHHHHHHHHHC-TTSEEE-ECCGGGHHHHHHTTCCE
T ss_pred cCCCEEEEEeCCCCHHHHHHHHHhC-CCeEEE-EccHHHHHHHHHcCCCE
Confidence 323 111112345667777788887 776664 33445578888877444
No 127
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=87.04 E-value=6 Score=40.90 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=101.5
Q ss_pred cccEEEecCccccccChhHHHHHHHHHHhCCceec-----CCcHHHHHHHh--CCchHHHHHHHHHHcCCCEEEecCCcc
Q 022982 53 FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRN--GPSAFKEYVEDCKQVGFDTIELNVGSL 125 (289)
Q Consensus 53 yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~-----~GtlfE~a~~q--g~~~~~~yl~~~k~lGF~~IEISdGti 125 (289)
=+|.+-+-..++ .-+.++.-++.++++|..+. +|.| |-.... +++.+-+..+.+.+.|.+.|=|-|-.-
T Consensus 210 Gvd~irIf~s~n---~l~~l~~~i~~ak~~G~~v~~~i~~~~d~-~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G 285 (718)
T 3bg3_A 210 GMDVFRVFDSLN---YLPNMLLGMEAAGSAGGVVEAAISYTGDV-ADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAG 285 (718)
T ss_dssp TCCEEEEECSSC---CHHHHHHHHHHHHTTTSEEEEEEECCSCT-TCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTS
T ss_pred CcCEEEEEecHH---HHHHHHHHHHHHHHcCCeEEEEEEeeccc-cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCC
Confidence 478887776444 45689999999999997642 3333 322211 223455666677789999999999999
Q ss_pred cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEe
Q 022982 126 EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 126 ~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
-+.+.+-.++|+.++++ +. ...+++.+. . | ...-+-..-..++|||+.|=.=
T Consensus 286 ~~~P~~v~~lV~~lk~~-~p-~~~I~~H~H-n------d-------------------~GlAvANslaAveAGa~~VD~t 337 (718)
T 3bg3_A 286 LLKPTACTMLVSSLRDR-FP-DLPLHIHTH-D------T-------------------SGAGVAAMLACAQAGADVVDVA 337 (718)
T ss_dssp CCCHHHHHHHHHHHHHH-ST-TCCEEEECC-C------T-------------------TSCHHHHHHHHHHTTCSEEEEB
T ss_pred CcCHHHHHHHHHHHHHh-CC-CCeEEEEEC-C------C-------------------ccHHHHHHHHHHHhCCCEEEec
Confidence 99999999999999985 21 223555331 1 1 2223677778899999965333
Q ss_pred ccccccCCCCccHHHHHHHHhccCCC
Q 022982 206 SDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 206 arGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
-.|+=...||...+.+-..+...+.+
T Consensus 338 i~GlGertGN~~lE~vv~~L~~~g~~ 363 (718)
T 3bg3_A 338 ADSMSGMTSQPSMGALVACTRGTPLD 363 (718)
T ss_dssp CGGGCSTTSCCBHHHHHHHHTTSTTC
T ss_pred CcccccccCchhHHHHHHHHHhcCCC
Confidence 35888899999988887777666543
No 128
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.04 E-value=2.4 Score=37.46 Aligned_cols=119 Identities=17% Similarity=0.171 Sum_probs=73.8
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (289)
+.+.+++.- .|++=+ +++.+.+++.+++-++.+|++|+.+.... ... +..+.+.+.|+|+|=++
T Consensus 93 ~i~~~~~aG---ad~I~l--~~~~~~~p~~l~~~i~~~~~~g~~v~~~v----------~t~-eea~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 93 DVDALAQAG---ADIIAF--DASFRSRPVDIDSLLTRIRLHGLLAMADC----------STV-NEGISCHQKGIEFIGTT 156 (229)
T ss_dssp HHHHHHHHT---CSEEEE--ECCSSCCSSCHHHHHHHHHHTTCEEEEEC----------SSH-HHHHHHHHTTCSEEECT
T ss_pred HHHHHHHcC---CCEEEE--CccccCChHHHHHHHHHHHHCCCEEEEec----------CCH-HHHHHHHhCCCCEEEec
Confidence 445554443 455533 34444444679999999999999877641 012 22345678999999543
Q ss_pred C-Cccc---CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHc
Q 022982 122 V-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEA 197 (289)
Q Consensus 122 d-Gti~---i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeA 197 (289)
. |... ....+ .++++++++.+..|..|-|+.. .+.+++.+++
T Consensus 157 ~~g~t~~~~~~~~~-~~li~~l~~~~ipvIA~GGI~t---------------------------------~~d~~~~~~~ 202 (229)
T 3q58_A 157 LSGYTGPITPVEPD-LAMVTQLSHAGCRVIAEGRYNT---------------------------------PALAANAIEH 202 (229)
T ss_dssp TTTSSSSCCCSSCC-HHHHHHHHTTTCCEEEESSCCS---------------------------------HHHHHHHHHT
T ss_pred CccCCCCCcCCCCC-HHHHHHHHHcCCCEEEECCCCC---------------------------------HHHHHHHHHc
Confidence 2 2211 11122 3677777776777777777721 3556677899
Q ss_pred cCcEEEEecccccc
Q 022982 198 GADMIMIDSDDVCK 211 (289)
Q Consensus 198 GA~~ViiEarGI~d 211 (289)
||+-|+| +..|++
T Consensus 203 GadgV~V-Gsai~~ 215 (229)
T 3q58_A 203 GAWAVTV-GSAITR 215 (229)
T ss_dssp TCSEEEE-CHHHHC
T ss_pred CCCEEEE-chHhcC
Confidence 9999999 555664
No 129
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.92 E-value=5.5 Score=37.24 Aligned_cols=143 Identities=11% Similarity=0.090 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv-------g---------------- 108 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGT-------G---------------- 108 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C----------------
Confidence 67888888889999999886543 579999999999999874 1 11111232 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -||+. .| ++..+.+.+++++
T Consensus 109 ----~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~ 184 (343)
T 2v9d_A 109 ----GTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADS 184 (343)
T ss_dssp ----SSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHh
Confidence 114788899999999999999998652 15664 23 6788899988744
Q ss_pred cCCCceEE--ec-CCchhHHHHHHHhC---CCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKTMF--EA-TNPRTSEWFIRRYG---PKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~eklif--EA-P~k~qQ~~~I~~fG---~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
. .+|+- |+ .+-.+...+++..+ +++.+. .-+|-+.+++|..|--|
T Consensus 185 ~--pnIvgiKdssgd~~~~~~l~~~~~~~~~~f~v~-~G~D~~~l~~l~~Ga~G 235 (343)
T 2v9d_A 185 R--SNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVL-CGYDDHLFNTLLLGGDG 235 (343)
T ss_dssp C--TTEEEEEECCSCHHHHHHHHHHHHHHCTTCEEE-ESSGGGHHHHHHTTCCE
T ss_pred C--CCEEEEEeCCCCHHHHHHHHHhcCCCCCCEEEE-ECcHHHHHHHHHCCCCE
Confidence 4 34432 55 45667777888887 666654 33455678999877433
No 130
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.82 E-value=2.6 Score=37.94 Aligned_cols=79 Identities=15% Similarity=0.051 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHcCCC-EEEecCCcc------c--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccc
Q 022982 102 AFKEYVEDCKQVGFD-TIELNVGSL------E--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVA 172 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~-~IEISdGti------~--i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~ 172 (289)
.+.+..+.+.+.||| +|||+-++= . -+.+...++|+.+++.= -+| +.+|-.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~P-v~vKi~----------------- 166 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKP-LGVKLP----------------- 166 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSC-EEEEEC-----------------
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCC-EEEEEC-----------------
Confidence 455666677788999 999975421 1 25666778898888751 122 444431
Q ss_pred cCCCCccccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 173 RAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
|. | |.+++.+.++...++||+.|++-.+
T Consensus 167 ~~-~------~~~~~~~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 167 PY-F------DLVHFDIMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp CC-C------SHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred CC-C------CHHHHHHHHHHHHHcCCcEEEecCC
Confidence 00 1 3667778889999999999998765
No 131
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=86.69 E-value=3.1 Score=36.27 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=74.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
.+.|++.|.|+|-|-+---.+|.++-.++++.+++.|+.+..+++-.
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~--------------------------------- 121 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI--------------------------------- 121 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS---------------------------------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc---------------------------------
Confidence 79999999999999555446888888999999999999999888651
Q ss_pred HHHHHHHHHHccCcEEEEeccccccCCC----CccH---HHHHHHHhccC-CCceEEecCCc-hhHHHHHHHhCCCccc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKHAD----SLRA---DIIAKVIGRLG-LEKTMFEATNP-RTSEWFIRRYGPKVNL 256 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~~G----~~r~---d~v~~ii~~l~-~eklifEAP~k-~qQ~~~I~~fG~~VNL 256 (289)
...++-.+.|+.+|=+|.+-... .| .... +.+.++++.+. --.++-|---+ ..+...+...|.|.=|
T Consensus 122 --~e~~~~~~~~~~~i~~~~~~~iG-tG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvl 197 (219)
T 2h6r_A 122 --NTSKAVAALSPDCIAVEPPELIG-TGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVL 197 (219)
T ss_dssp --HHHHHHTTTCCSEEEECCCC---------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEE
T ss_pred --hHHHHHHhCCCCEEEEEeccccc-cCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEE
Confidence 01122345588888899872211 12 1111 23334455554 23567777654 5777778888877655
No 132
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.45 E-value=2.6 Score=38.30 Aligned_cols=77 Identities=21% Similarity=0.128 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ .|+ | .
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gvi--aGv-------g--~--------------- 74 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKII--FQV-------G--G--------------- 74 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEE--Eec-------C--C---------------
Confidence 67888899899999999886543 57999999999999998411011 222 1 0
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
.+..+.|++++..-++|||.|++=.-
T Consensus 75 ---~~t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 75 ---LNLDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp ---SCHHHHHHHHHHGGGSCCSEEEEECC
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 13778899999999999999998653
No 133
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=86.40 E-value=7.3 Score=33.72 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=67.2
Q ss_pred HHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecC---C--cHH----HHHHHhCCchHHHHHHHHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G--DWA----EHLIRNGPSAFKEYVEDCK 111 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~---G--tlf----E~a~~qg~~~~~~yl~~~k 111 (289)
.+++.++.+.+. .|.+=+.... ..+.+++.-++++++|+.++. + +++ +....+.-+.+++.++.|+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 114 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGG----LAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAG 114 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTT----CGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----hHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 466667666655 6777777653 245689999999999997752 2 121 1111111126889999999
Q ss_pred HcCCCEEEecCCcccC------Ch-------hHHHHHHHHHHHcCCccccee
Q 022982 112 QVGFDTIELNVGSLEI------PE-------ETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 112 ~lGF~~IEISdGti~i------~~-------~~r~~lI~~~~~~G~~v~~E~ 150 (289)
++|.+.|=+..|+... .. +...++.+.+++.|+++.-|-
T Consensus 115 ~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 166 (287)
T 3kws_A 115 ELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEP 166 (287)
T ss_dssp HTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECC
T ss_pred HcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 9999999987664432 22 233445566777787755553
No 134
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=86.39 E-value=11 Score=35.54 Aligned_cols=140 Identities=9% Similarity=0.097 Sum_probs=91.3
Q ss_pred HHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022982 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (289)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (289)
+-+.|..+| ||.+=.||+.+ .| ...+-++.+++.+.....-+| .+. ..++ ++.+.+.|.+.|-|..
T Consensus 30 ia~~L~~~G--v~~IE~g~p~~--~~--~~~~~~~~i~~~~~~~~v~~~-----~r~--~~~d-i~~a~~~g~~~v~i~~ 95 (382)
T 2ztj_A 30 IAKALDEFG--IEYIEVTTPVA--SP--QSRKDAEVLASLGLKAKVVTH-----IQC--RLDA-AKVAVETGVQGIDLLF 95 (382)
T ss_dssp HHHHHHHHT--CSEEEECCTTS--CH--HHHHHHHHHHTSCCSSEEEEE-----EES--CHHH-HHHHHHTTCSEEEEEE
T ss_pred HHHHHHHcC--cCEEEEcCCcC--CH--HHHHHHHHHHhcCCCcEEEEE-----ccc--Chhh-HHHHHHcCCCEEEEEe
Confidence 445566666 88888888654 23 355677777777654221223 122 2333 6778888999999876
Q ss_pred Cccc-------CCh----hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHH
Q 022982 123 GSLE-------IPE----ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRA 191 (289)
Q Consensus 123 Gti~-------i~~----~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~ 191 (289)
.+-+ .+. +.-.+.|+.+++.|-....++...+.. ..|++.+++.+
T Consensus 96 ~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~------------------------~~~~~~~~~~~ 151 (382)
T 2ztj_A 96 GTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF------------------------RSEEQDLLAVY 151 (382)
T ss_dssp CC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT------------------------TSCHHHHHHHH
T ss_pred ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC------------------------CCCHHHHHHHH
Confidence 5543 232 445688999999983322344442110 11588999999
Q ss_pred HHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 192 ERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 192 ~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
+...++ |+.| .|+|..|-..+..+.++++
T Consensus 152 ~~~~~~-a~~i-----~l~DT~G~~~P~~~~~lv~ 180 (382)
T 2ztj_A 152 EAVAPY-VDRV-----GLADTVGVATPRQVYALVR 180 (382)
T ss_dssp HHHGGG-CSEE-----EEEETTSCCCHHHHHHHHH
T ss_pred HHHHHh-cCEE-----EecCCCCCCCHHHHHHHHH
Confidence 999999 9866 4788889888988888886
No 135
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=86.31 E-value=2.6 Score=38.25 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ .|+ | .
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gVi--aGv-------g--~--------------- 74 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLI--FQV-------G--S--------------- 74 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEE--EEC-------C--C---------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeE--Eee-------C--C---------------
Confidence 67888999999999999886543 47999999999999987410011 222 1 1
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEecccccc-CCCCccHHHHHHHHhccCCCceEEecC
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIGRLGLEKTMFEAT 238 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d-~~G~~r~d~v~~ii~~l~~eklifEAP 238 (289)
.+..+.|++++..-++|||.|++=.--.+. .+-+---+-..+|++..++-=++.--|
T Consensus 75 ---~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 75 ---LNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYP 132 (288)
T ss_dssp ---SCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 147788999999999999999986643222 111101112234555555555566655
No 136
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=86.26 E-value=2 Score=39.04 Aligned_cols=111 Identities=14% Similarity=0.223 Sum_probs=59.7
Q ss_pred ChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCC
Q 022982 68 PKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 68 p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~ 144 (289)
+.+.+++.++.+|++|+.+-. |+ . ..++ ++.+.++|.+.|=|++-. ...+.+.-.++.+.+. .+.
T Consensus 147 ~~~~l~~l~~~a~~lGl~~lv----ev---~---t~ee-~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~-~~~ 214 (272)
T 3qja_A 147 EQSVLVSMLDRTESLGMTALV----EV---H---TEQE-ADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLP-SSV 214 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE----EE---S---SHHH-HHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSC-TTS
T ss_pred CHHHHHHHHHHHHHCCCcEEE----Ec---C---CHHH-HHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCc-ccC
Confidence 344577777777777775422 11 1 2333 344556778887777522 2333333333322211 145
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHH
Q 022982 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKV 224 (289)
Q Consensus 145 ~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~i 224 (289)
.+..|.|++ + .+.+++.+++||+-|+| ++.|+.... -...+.++
T Consensus 215 pvVaegGI~-----------------------------t----~edv~~l~~~GadgvlV-Gsal~~a~d--p~~~~~~l 258 (272)
T 3qja_A 215 IRIAESGVR-----------------------------G----TADLLAYAGAGADAVLV-GEGLVTSGD--PRAAVADL 258 (272)
T ss_dssp EEEEESCCC-----------------------------S----HHHHHHHHHTTCSEEEE-CHHHHTCSC--HHHHHHHH
T ss_pred EEEEECCCC-----------------------------C----HHHHHHHHHcCCCEEEE-cHHHhCCCC--HHHHHHHH
Confidence 556666662 1 24556677999999998 444666553 13344555
Q ss_pred Hh
Q 022982 225 IG 226 (289)
Q Consensus 225 i~ 226 (289)
++
T Consensus 259 ~~ 260 (272)
T 3qja_A 259 VT 260 (272)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 137
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=86.00 E-value=0.89 Score=40.43 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--cccC-----ChhHHHHHHHHHHHcCCcccceeeeec-------CCCCCC-----C-
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG--SLEI-----PEETLLRYVRLVKSAGLKAKPKFAVMF-------NKSDIP-----S- 161 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG--ti~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~-------~~~evg-----~- 161 (289)
.+++.++.++++||+.||+... .++. +.+...++.+.+++.|+++.. ++.-. +..+.. +
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~g~~~~~p~~~~~~~~~~~~ 94 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA-ISNHLVGQAVCDAIIDERHEAILPA 94 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE-EEEHHHHHHHHCSCCSHHHHHHSCH
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE-eeccccccccccccccccccccccc
Confidence 7899999999999999999863 3332 345567888999999999753 22100 100000 0
Q ss_pred ---c-cccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecccc-ccCC-----C--CccHH-------HH-
Q 022982 162 ---D-RDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDV-CKHA-----D--SLRAD-------II- 221 (289)
Q Consensus 162 ---~-~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI-~d~~-----G--~~r~d-------~v- 221 (289)
. .|++ . ......+.+.+.++..-+.||..|++-.-.. .+.. . ..+.+ .+
T Consensus 95 ~l~~~~~~~-------~----~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (340)
T 2zds_A 95 RIWGDGDAE-------G----VRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWN 163 (340)
T ss_dssp HHHTTCCHH-------H----HHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccCCHH-------H----HHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHH
Confidence 0 0000 0 0011245556666666688999999864211 1000 0 00111 12
Q ss_pred --HHHHhccCCCceEEec------CCchhHHHHHHHhC--CCcccccCCCCc
Q 022982 222 --AKVIGRLGLEKTMFEA------TNPRTSEWFIRRYG--PKVNLFVDHSQV 263 (289)
Q Consensus 222 --~~ii~~l~~eklifEA------P~k~qQ~~~I~~fG--~~VNLgI~~~eV 263 (289)
.++++..|+ +|.+|. .+..+-..+++..| |+|-+..|....
T Consensus 164 ~l~~~a~~~Gv-~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~vg~~~D~~H~ 214 (340)
T 2zds_A 164 PILDVFDAEGV-RFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHF 214 (340)
T ss_dssp HHHHHHHHHTC-EEEEECCTTSSCCSHHHHHHHHHHTTTCTTEEEEECCHHH
T ss_pred HHHHHHHHcCC-EEEEEcCCCcccCCHHHHHHHHHhcCCCCCeeEEEchhhH
Confidence 223344455 678885 34556678999998 666665665544
No 138
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=85.84 E-value=4.1 Score=36.98 Aligned_cols=144 Identities=14% Similarity=0.075 Sum_probs=94.6
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G-~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- =++.-=+|+ |
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv-------g---------------- 79 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT-------G---------------- 79 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC-------C----------------
Confidence 478889999999999999665333 4789999999999998841 011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.++++
T Consensus 80 ----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~- 154 (292)
T 3daq_A 80 ----TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ- 154 (292)
T ss_dssp ----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT-
T ss_pred ----cccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc-
Confidence 114788899999999999999998762 15653 24667778887775
Q ss_pred cCCCceE--EecC-CchhHHHHHHHhCC-CcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKTM--FEAT-NPRTSEWFIRRYGP-KVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~ekli--fEAP-~k~qQ~~~I~~fG~-~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
. .+|+ =|+. +-.+...+++..++ +..+.- -+|-+-+++|..|--|
T Consensus 155 ~--pnivgiK~ssgd~~~~~~~~~~~~~~~f~v~~-G~d~~~~~~l~~G~~G 203 (292)
T 3daq_A 155 H--PYIVALKDATNDFEYLEEVKKRIDTNSFALYS-GNDDNVVEYYQRGGQG 203 (292)
T ss_dssp S--TTEEEEEECCCCHHHHHHHHTTSCTTTSEEEE-SCGGGHHHHHHTTCCE
T ss_pred C--CCEEEEEeCCCCHHHHHHHHHHCCCCCEEEEE-CCHHHHHHHHhcCCCE
Confidence 3 3443 2443 45566667777766 555543 3344567888876544
No 139
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=85.67 E-value=4.1 Score=37.89 Aligned_cols=142 Identities=8% Similarity=0.091 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv-------g---------------- 111 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGI-------G---------------- 111 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEE-------C----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C----------------
Confidence 6788888888899999988654 3489999999999999874 1 11111233 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-CccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~---~G-~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||-|++=.- -||+. .| ++..+.+.++++
T Consensus 112 ----~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~- 186 (332)
T 2r8w_A 112 ----ALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY- 186 (332)
T ss_dssp ----CSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT-
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc-
Confidence 114778899999999999999998652 15663 23 677888888874
Q ss_pred cCCCceEE--ec-CC----chhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKTMF--EA-TN----PRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~eklif--EA-P~----k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
..+|+- |+ ++ -.+...+++..++++.+.-- +|-+.+++|..|--|
T Consensus 187 --~pnIvgiKdssgd~~~~~~~~~~l~~~~~~~f~v~~G-~D~~~l~~l~~G~~G 238 (332)
T 2r8w_A 187 --IPNIRAIKMPLPADADYAGELARLRPKLSDDFAIGYS-GDWGCTDATLAGGDT 238 (332)
T ss_dssp --STTEEEEEECCCTTCCHHHHHHHHTTTSCTTCEEEEC-CHHHHHHHHHTTCSE
T ss_pred --CCCEEEEEeCCCCchhHHHHHHHHHHhcCCCEEEEeC-chHHHHHHHHCCCCE
Confidence 345542 55 34 45566677777777666533 344668888877444
No 140
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=85.60 E-value=9.8 Score=36.86 Aligned_cols=75 Identities=9% Similarity=0.168 Sum_probs=48.1
Q ss_pred HHHHH---HhhcccccEEEecCcc------ccccChhHHHHHHHHHHhC---------------------Cce-----ec
Q 022982 43 LEDIF---ESMGQFVDGLKFSGGS------HSLMPKPFIEEVVKRAHQH---------------------DVY-----VS 87 (289)
Q Consensus 43 ~~DlL---e~ag~yID~lKfg~GT------s~l~p~~~l~eKI~l~~~~---------------------gV~-----v~ 87 (289)
.+|++ +...+|.|++=+=.+| ..+..++.|.+.++-.++. .++ +.
T Consensus 198 ~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~ 277 (415)
T 3i65_A 198 VDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA 277 (415)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEec
Confidence 45554 4556778887766554 4567777788777766653 333 34
Q ss_pred CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc
Q 022982 88 TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (289)
Q Consensus 88 ~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti 125 (289)
|+ |- . +.+.+..+.|.+.|.|.|-++|.+.
T Consensus 278 pd-~~-----~--~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 278 PD-LN-----Q--EQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp SC-CC-----H--HHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred CC-CC-----H--HHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 54 20 1 1578888999999999999999876
No 141
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=85.60 E-value=8.2 Score=35.54 Aligned_cols=85 Identities=27% Similarity=0.316 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCc--c------cC----------ChhHH----HHHHHHHHHcCCcccceeeeecCCCCCC
Q 022982 103 FKEYVEDCKQVGFDTIELNVGS--L------EI----------PEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIP 160 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGt--i------~i----------~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~~evg 160 (289)
+-+--+.+++.|||.|||.-+. + +. +.+.| +++|+.+++.= -.-+++|....+
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v---~~pv~vris~~~-- 220 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW---DGPLFVRVSASD-- 220 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEEEECCC--
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc---CCcEEEEecCcc--
Confidence 4444556678999999997653 1 11 22344 45666666641 123666643211
Q ss_pred CccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc
Q 022982 161 SDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD 208 (289)
Q Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG 208 (289)
+...+. +.++.++.++..-++|+++|-+=++.
T Consensus 221 ---------------~~~~g~-~~~~~~~~a~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 221 ---------------YTDKGL-DIADHIGFAKWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp ---------------CSTTSC-CHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ---------------cCCCCC-CHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 111111 57788889998889999999986553
No 142
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=85.33 E-value=4.6 Score=41.76 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=72.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
.+++++.+.+.|.+.|-|.+..-++ +.....|+.+++.|..|. +.+... .++ .|+ ++ ..-
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~l--~~l~~~i~~ak~~G~~v~--~~i~~~-~d~---~dp--------~r----~~~ 258 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNYL--PNMLLGMEAAGSAGGVVE--AAISYT-GDV---ADP--------SR----TKY 258 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCCH--HHHHHHHHHHHTTTSEEE--EEEECC-SCT---TCT--------TC----CTT
T ss_pred hHHHHHHHHhcCcCEEEEEecHHHH--HHHHHHHHHHHHcCCeEE--EEEEee-ccc---cCC--------CC----CCC
Confidence 6899999999999999999866543 466678999999996543 334321 111 121 11 011
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
|++.+++.+++..++||+.| .|+|..|-.....+.++++.
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I-----~l~DT~G~~~P~~v~~lV~~ 298 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHIL-----CIKDMAGLLKPTACTMLVSS 298 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEE-----EEECTTSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEE-----EEcCcCCCcCHHHHHHHHHH
Confidence 58999999999999999866 47899999998888887753
No 143
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=85.33 E-value=20 Score=33.37 Aligned_cols=169 Identities=14% Similarity=0.176 Sum_probs=105.3
Q ss_pred CCCCceeEecCCCCCCCchhHHHHHHHhhccccc----EEEecCccccccCh----h-HHHHHHHHHHhC--CceecC--
Q 022982 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD----GLKFSGGSHSLMPK----P-FIEEVVKRAHQH--DVYVST-- 88 (289)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID----~lKfg~GTs~l~p~----~-~l~eKI~l~~~~--gV~v~~-- 88 (289)
|..|++-++-+|. .+...+..++.+..|=| .+..+.|-+...-. + .+.+..+++.++ .|.--+
T Consensus 62 ~~aGV~~ii~~g~----~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEi 137 (325)
T 3ipw_A 62 ERNGLSHIIITSG----CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEI 137 (325)
T ss_dssp HHTTEEEEEECCC----SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEE
T ss_pred HHcCCcEEEEccC----CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEee
Confidence 4679999999999 66689999999988865 77778776654322 1 567777777664 221111
Q ss_pred C-cHH-----HHHHHhCCchHHHHHHHHHH-cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCC
Q 022982 89 G-DWA-----EHLIRNGPSAFKEYVEDCKQ-VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPS 161 (289)
Q Consensus 89 G-tlf-----E~a~~qg~~~~~~yl~~~k~-lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~ 161 (289)
| .+. -...++. .|.+.++.|++ ++...|==+-.. .+ ++++.+++.+.... -|+-...+ |
T Consensus 138 GLD~~~~~~~~~~~Q~~--~F~~ql~lA~e~~~lPviiH~r~A----~~---d~l~iL~~~~~~~~--~gViH~Fs--G- 203 (325)
T 3ipw_A 138 GLDYERLQFSDKETQLS--GYRTLSILHQKYPYLPFFFHCRKS----WS---DLCQLNKELGYNGC--KGVVHCFD--G- 203 (325)
T ss_dssp EEETTCCSSSCHHHHHH--HHHHTHHHHHHCTTCCEEEEEESC----HH---HHHHHHHHTTCTTS--CEEECSCC--C-
T ss_pred ecCCCcCCCCCHHHHHH--HHHHHHHHHHHhhCCeEEEEeCch----HH---HHHHHHHhcCCCCC--cEEEEECC--C-
Confidence 2 121 1223444 79999999999 999877444332 23 45666666543311 23422111 1
Q ss_pred ccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCCch
Q 022982 162 DRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNPR 241 (289)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k~ 241 (289)
+ .+++++.|+.|. ++=+=+- ++. +.+.+ ++++.+|++||+.|..-|-
T Consensus 204 --s-----------------------~e~a~~~l~lG~-yis~~G~-~~k-----~~~~~-~~v~~iPldrlLlETDaP~ 250 (325)
T 3ipw_A 204 --T-----------------------EEEMNQILNEGW-DIGVTGN-SLQ-----SIELL-NVMKQIPIERLHIETDCPY 250 (325)
T ss_dssp --C-----------------------HHHHHHHHHTTC-EEEECSG-GGS-----SHHHH-HHHTTSCGGGEEECCCTTS
T ss_pred --C-----------------------HHHHHHHHhcCc-EEeeCcc-ccC-----cHHHH-HHHHhCCcccEEEeCCCcc
Confidence 1 578888999994 4433332 332 23334 5889999999999977653
No 144
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.27 E-value=7.7 Score=35.47 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=89.1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+ |
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv-------g---------------- 92 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA-------G---------------- 92 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC-------C----------------
Confidence 368889999999999999776443 479999999999999884 1011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -||+. .-++..+.+.+++ +
T Consensus 93 ----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La-~ 167 (304)
T 3l21_A 93 ----TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA-S 167 (304)
T ss_dssp ----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH-T
T ss_pred ----CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh-c
Confidence 114788899999999999999999762 14543 2356677777776 3
Q ss_pred cCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 228 LGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~~ekli--fEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
.| +|+ =|+ .+-.+...++. ++++.+. .-+|-+-+++|..|--|
T Consensus 168 ~p--nIvgiKdssgd~~~~~~~~~--~~~f~v~-~G~d~~~l~~l~~Ga~G 213 (304)
T 3l21_A 168 HP--NIVGVXDAKADLHSGAQIMA--DTGLAYY-SGDDALNLPWLRMGATG 213 (304)
T ss_dssp ST--TEEEEEECSCCHHHHHHHHH--HHCCEEE-ESSGGGHHHHHHHTCCE
T ss_pred CC--CEEEEECCCCCHHHHHHHhc--CCCeEEE-eCchHHHHHHHHcCCCE
Confidence 33 332 233 34444444552 3444443 33444557777766433
No 145
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.04 E-value=4.4 Score=37.11 Aligned_cols=143 Identities=10% Similarity=0.092 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=.|+ |
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-------g----------------- 91 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS-------G----------------- 91 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC-------C-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec-------C-----------------
Confidence 67888889999999999776544 369999999999999884 0011001122 1
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEecc----------c-----------------cccC---CC-CccHHHHHHHHh
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSD----------D-----------------VCKH---AD-SLRADIIAKVIG 226 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEar----------G-----------------I~d~---~G-~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=.- | ||+. .| ++..+.+.++++
T Consensus 92 ---~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 92 ---CESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp ---CSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred ---CCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 114778899999999999999998431 1 4553 22 566777777763
Q ss_pred ccCCCceE--Eec-CCchhHHHHHHHh-CCCcccccCCCCchhhhhhhcccCC
Q 022982 227 RLGLEKTM--FEA-TNPRTSEWFIRRY-GPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 227 ~l~~ekli--fEA-P~k~qQ~~~I~~f-G~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
.+ +|+ =|+ .+-.+...++++. +++..+.--. |-+-+++|..|--|
T Consensus 169 -~p--nIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~-d~~~l~~l~~G~~G 217 (307)
T 3s5o_A 169 -HP--NIVGMXDSGGDVTRIGLIVHKTRKQDFQVLAGS-AGFLMASYALGAVG 217 (307)
T ss_dssp -ST--TEEEEEECSCCHHHHHHHHHHTTTSSCEEEESS-GGGHHHHHHHTCCE
T ss_pred -CC--CEEEEEcCCCCHHHHHHHHHhccCCCeEEEeCc-HHHHHHHHHcCCCE
Confidence 33 332 244 3555556666666 5666664333 33567777766443
No 146
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=84.99 E-value=4.4 Score=37.22 Aligned_cols=148 Identities=9% Similarity=0.052 Sum_probs=87.9
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
+.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- . .+-+-- -+|
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g---rvpVia---Gvg----------------- 84 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K---SMQVIV---GVS----------------- 84 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T---TSEEEE---ECC-----------------
T ss_pred HHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C---CCcEEE---ecC-----------------
Confidence 367888888889999999654333 3699999999999998853 1 111100 111
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEecc--------------------c------cccC----CCCccHHHHHHHHhc
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSD--------------------D------VCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEar--------------------G------I~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.= + ||+. .-++..+.+.++++.
T Consensus 85 ---~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (313)
T 3dz1_A 85 ---APGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMD 161 (313)
T ss_dssp ---CSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHh
Confidence 114778899999999999999998431 2 3442 225566677776654
Q ss_pred cC-CCceEEec-CCchhHHHHHHHhC----CCcccccCCCCchhhhhhhcccCC
Q 022982 228 LG-LEKTMFEA-TNPRTSEWFIRRYG----PKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 228 l~-~eklifEA-P~k~qQ~~~I~~fG----~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
.| +-=|=.++ ++-.+...+++..+ ++..+.--.++..-..+|..|--|
T Consensus 162 ~pnIvgiKd~~~~~~~~~~~~~~~~~~~~~~~f~v~~G~d~~~l~~~l~~G~~G 215 (313)
T 3dz1_A 162 SASCVMLKHEDWPGLEKITTLRGFQKDGSLRPLSILCGNGGLFLDFEMERGADG 215 (313)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHTSSCCCEEEECGGGTTHHHHHHHTCCE
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHhcCccCCCCeEEEeCCcHHHHHHHHHCCCcE
Confidence 43 11111243 34455556666665 555554333332222246655444
No 147
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=84.98 E-value=3.4 Score=40.10 Aligned_cols=140 Identities=14% Similarity=0.226 Sum_probs=87.1
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCc--eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV--YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV--~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
.+-+.|..+| ||.+=.||..+. | . -.+-++...+.+. .++. | .+. ..++ ++.+.+.|.+.|-
T Consensus 65 ~Ia~~L~~~G--v~~IEvG~P~as--p-~-d~~~~~~i~~~~~~~~v~~--~-----~r~--~~~d-i~~A~~aG~~~V~ 128 (423)
T 3ivs_A 65 QIAKALDNFG--VDYIELTSPVAS--E-Q-SRQDCEAICKLGLKCKILT--H-----IRC--HMDD-ARVAVETGVDGVD 128 (423)
T ss_dssp HHHHHHHHHT--CSEEEECCTTSC--H-H-HHHHHHHHHTSCCSSEEEE--E-----EES--CHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHcC--CCEEEEeecccC--H-H-HHHHHHHHHhcCCCCEEEE--e-----ecc--Chhh-HHHHHHcCCCEEE
Confidence 3455666777 788888885443 2 2 2233333444443 2221 1 121 2333 5777888999998
Q ss_pred ecCCcc--------cCC----hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHH
Q 022982 120 LNVGSL--------EIP----EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (289)
Q Consensus 120 ISdGti--------~i~----~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
|...+- ..+ .+.-.+.|+.+++.|+.| +|...+. + ..|++.+
T Consensus 129 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V--~~~~eda-----------~-------------r~d~~~~ 182 (423)
T 3ivs_A 129 VVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEV--RFSSEDS-----------F-------------RSDLVDL 182 (423)
T ss_dssp EEEEC-------------CHHHHHHHHHHHHHHTTTCEE--EEEEESG-----------G-------------GSCHHHH
T ss_pred EEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEE--EEEEccC-----------c-------------CCCHHHH
Confidence 864432 222 344456899999999876 4444221 0 1258889
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
++.+++..++||+.| .|+|..|-..+..+.++++.+
T Consensus 183 ~~v~~~~~~~Ga~~i-----~l~DTvG~~~P~~v~~lv~~l 218 (423)
T 3ivs_A 183 LSLYKAVDKIGVNRV-----GIADTVGCATPRQVYDLIRTL 218 (423)
T ss_dssp HHHHHHHHHHCCSEE-----EEEETTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcc-----ccCCccCcCCHHHHHHHHHHH
Confidence 999999999999875 478888888888888877543
No 148
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=84.96 E-value=5.8 Score=36.25 Aligned_cols=159 Identities=16% Similarity=0.104 Sum_probs=101.2
Q ss_pred CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--C-CcccceeeeecC
Q 022982 82 HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--G-LKAKPKFAVMFN 155 (289)
Q Consensus 82 ~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G-~~v~~E~g~k~~ 155 (289)
.||.+..=|.|-.=-.=+.+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ..|+ +|+
T Consensus 18 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi--aGv--- 92 (304)
T 3cpr_A 18 GTVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI--AGV--- 92 (304)
T ss_dssp CSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE--EEC---
T ss_pred CceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE--ecC---
Confidence 466555444331000111236888899999999999877543 3489999999999999873 2 1111 233
Q ss_pred CCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccc
Q 022982 156 KSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVC 210 (289)
Q Consensus 156 ~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~ 210 (289)
| ..+..+.|++++..-++|||.|++=.- -||
T Consensus 93 ----g--------------------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 93 ----G--------------------TNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp ----C--------------------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred ----C--------------------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 1 114778899999999999999998652 156
Q ss_pred cC----CCCccHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 211 KH----ADSLRADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 211 d~----~G~~r~d~v~~ii~~l~~eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+. .-++..+.+.++++ ..+|+- |+ ++-.+...+++.. +..+ ..-+|-+.+++|..|--|
T Consensus 149 n~P~~tg~~l~~~~~~~La~---~pnIvgiKdssgd~~~~~~~~~~~--~f~v-~~G~d~~~l~~l~~G~~G 214 (304)
T 3cpr_A 149 DIPGRSGIPIESDTMRRLSE---LPTILAVXDAKGDLVAATSLIKET--GLAW-YSGDDPLNLVWLALGGSG 214 (304)
T ss_dssp ECHHHHSSCCCHHHHHHHTT---STTEEEEEECSCCHHHHHHHHHHH--CCEE-EECSGGGHHHHHHTTCCE
T ss_pred eCccccCcCCCHHHHHHHHc---CCCEEEEecCCCCHHHHHHHHHhc--CEEE-EECcHHHHHHHHHCCCCE
Confidence 63 23567788887763 345543 44 4556666677665 3333 444555678888876444
No 149
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=84.92 E-value=12 Score=35.56 Aligned_cols=139 Identities=17% Similarity=0.221 Sum_probs=86.6
Q ss_pred chhHHHHHHHhhcc--cccEEEecCccccccChhHHHHHHHHHHhC-Cc-eecCCcHHHHHHHhCCchHHHHHHHHHHcC
Q 022982 39 SHNVLEDIFESMGQ--FVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVG 114 (289)
Q Consensus 39 g~~~~~DlLe~ag~--yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lG 114 (289)
....+..+++.+.+ -+.-+-|.+|--.+.+.+.|.+.++.+++. ++ .+.-+|-.=+.+-+- --+++++.+++.
T Consensus 146 s~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~--it~e~l~~L~~~- 222 (416)
T 2a5h_A 146 PMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQR--ITPELVNMLKKY- 222 (416)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGG--CCHHHHHHHGGG-
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEeccccccccc--CCHHHHHHHHhc-
Confidence 45677777776554 367789999999999977799999999987 44 233233110011010 125677777777
Q ss_pred CCEEEecC---CcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHH
Q 022982 115 FDTIELNV---GSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRA 191 (289)
Q Consensus 115 F~~IEISd---Gti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~ 191 (289)
+.|-||- +.-.|. ++..+.|+++++.|+.+....-+-.+ ++ | +.+.+.+.+
T Consensus 223 -~~v~Isl~~~~~~ei~-~~v~~ai~~L~~aGi~v~i~~vll~G---vN---d------------------~~e~l~~l~ 276 (416)
T 2a5h_A 223 -HPVWLNTHFNHPNEIT-EESTRACQLLADAGVPLGNQSVLLRG---VN---D------------------CVHVMKELV 276 (416)
T ss_dssp -CSEEEEECCCSGGGCC-HHHHHHHHHHHHTTCCEEEEEECCTT---TT---C------------------SHHHHHHHH
T ss_pred -CcEEEEEecCCHHHHh-HHHHHHHHHHHHcCCEEEEEEEEECC---CC---C------------------CHHHHHHHH
Confidence 5555542 333555 67789999999999875544433111 11 1 245566666
Q ss_pred HHHHHccCcEEEEec
Q 022982 192 ERCLEAGADMIMIDS 206 (289)
Q Consensus 192 ~~dLeAGA~~ViiEa 206 (289)
+...+.|+....+.-
T Consensus 277 ~~l~~lgv~~~~i~~ 291 (416)
T 2a5h_A 277 NKLVKIRVRPYYIYQ 291 (416)
T ss_dssp HHHHHTTEEEEEEEC
T ss_pred HHHHHcCCceEEEee
Confidence 666788988765553
No 150
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=84.78 E-value=3.2 Score=38.40 Aligned_cols=64 Identities=17% Similarity=0.150 Sum_probs=46.6
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec------CCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022982 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN------VGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 79 ~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS------dGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+.+||+..+.. .| .-++.++.+|++|+++|-|. .|.-+ .+.-++++++|+++||+|.-.|+.
T Consensus 15 ~e~~g~~~~~~--------~G--~~~d~~~ilk~~G~N~VRi~~w~~P~~g~~~--~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 15 EERAGVSYKNT--------NG--NAQPLENILAANGVNTVRQRVWVNPADGNYN--LDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp HHHTTCCCBCT--------TS--CBCCHHHHHHHTTCCEEEEEECSSCTTCTTS--HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHcCCEEECC--------CC--CcccHHHHHHHCCCCEEEEeeeeCCCCCcCC--HHHHHHHHHHHHHCCCEEEEEecc
Confidence 56677766651 12 23456788899999999994 44333 466778999999999999999877
Q ss_pred ec
Q 022982 153 MF 154 (289)
Q Consensus 153 k~ 154 (289)
.+
T Consensus 83 sd 84 (332)
T 1hjs_A 83 SD 84 (332)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 151
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=84.77 E-value=4.1 Score=38.21 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+......|+ +|+ .+
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVi--aGv---g~--------------------- 101 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVI--VGT---GA--------------------- 101 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEE--EEC---CC---------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEE--Eec---CC---------------------
Confidence 5677777777888888776544 346889999999888322222222 333 10
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
.+..+.|++++..-++|||.|++=.-
T Consensus 102 ---~st~eai~la~~A~~~Gadavlv~~P 127 (344)
T 2hmc_A 102 ---VNTASAVAHAVHAQKVGAKGLMVIPR 127 (344)
T ss_dssp ---SSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 13677788888888889998888654
No 152
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=84.74 E-value=11 Score=34.29 Aligned_cols=145 Identities=14% Similarity=0.068 Sum_probs=100.1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G-~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- =++.-=+|+ |
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-------g---------------- 84 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT-------G---------------- 84 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC-------C----------------
Confidence 367888889899999999875444 3789999999999998830 011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCCccHHHHHHHHhc
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRADIIAKVIGR 227 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii~~ 227 (289)
..+..+.|++++..-++|||.|++=.- -+|+. .-++..+.+.++. +
T Consensus 85 ----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La-~ 159 (297)
T 3flu_A 85 ----ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA-E 159 (297)
T ss_dssp ----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT-T
T ss_pred ----CcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH-c
Confidence 114788899999999999999998762 15663 3467778888886 3
Q ss_pred cCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCCC
Q 022982 228 LGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLGK 276 (289)
Q Consensus 228 l~~ekli--fEA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G~ 276 (289)
.| +|+ =|+ .+-.+...++++.+++..+.-- +|-+.+++|..|--|-
T Consensus 160 ~p--nivgiKdssgd~~~~~~~~~~~~~~f~v~~G-~d~~~l~~l~~G~~G~ 208 (297)
T 3flu_A 160 IP--NIVGVKEASGNIGSNIELINRAPEGFVVLSG-DDHTALPFMLCGGHGV 208 (297)
T ss_dssp ST--TEEEEEECSCCHHHHHHHHHHSCTTCEEEEC-CGGGHHHHHHTTCCEE
T ss_pred CC--CEEEEEeCCCCHHHHHHHHHhcCCCeEEEEC-cHHHHHHHHhCCCCEE
Confidence 43 442 244 5667777888888888777533 3455788898775443
No 153
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=84.49 E-value=3.4 Score=35.02 Aligned_cols=90 Identities=16% Similarity=0.204 Sum_probs=55.5
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.++++.+.+.|.+.|.+......=|.+...++++.+++. |+.+. +.-
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~----~~~--------------------------- 126 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIM----ADI--------------------------- 126 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEE----EEC---------------------------
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEE----ecC---------------------------
Confidence 456778889999999987654332224456788888887 65542 210
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCC-----CccHHHHHHHHhcc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHAD-----SLRADIIAKVIGRL 228 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G-----~~r~d~v~~ii~~l 228 (289)
.+++ .+++..++||++|++-..|.++... ...-+.+.++.+.+
T Consensus 127 ~t~~----e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~ 174 (223)
T 1y0e_A 127 ATVE----EAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV 174 (223)
T ss_dssp SSHH----HHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC
T ss_pred CCHH----HHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC
Confidence 0133 3455779999999986665543321 12334566666554
No 154
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=84.42 E-value=5.2 Score=34.33 Aligned_cols=92 Identities=7% Similarity=-0.025 Sum_probs=56.3
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC--CceecC-CcHHHHHHHhCCchHHHHHHHHHHcCC
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGF 115 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF 115 (289)
.+....++++..+.++|++|+|+=-..-...+.+++ .+++ +.++.. .-+.+ .-..|.+.|.+.|.
T Consensus 17 ~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~~----lr~~~~~~~i~ld~~l~d--------~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 17 NLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVST----LRHNHPNHILVCDMKTTD--------GGAILSRMAFEAGA 84 (218)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHH----HHHHCTTSEEEEEEEECS--------CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHHH----HHHhCCCCcEEEEEeecc--------cHHHHHHHHHhcCC
Confidence 566777888878889999999952111122233333 3333 444432 11211 12347788999999
Q ss_pred CEEEecCCcccCChhHHHHHHHHHHHcCCc
Q 022982 116 DTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (289)
Q Consensus 116 ~~IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (289)
|.|=+-+-.. .+...++++.+++.|.+
T Consensus 85 d~i~vh~~~~---~~~~~~~~~~~~~~g~~ 111 (218)
T 3jr2_A 85 DWITVSAAAH---IATIAACKKVADELNGE 111 (218)
T ss_dssp SEEEEETTSC---HHHHHHHHHHHHHHTCE
T ss_pred CEEEEecCCC---HHHHHHHHHHHHHhCCc
Confidence 9998876542 34456788888887664
No 155
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=84.31 E-value=2.3 Score=36.19 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=77.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecC-CC--CCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFN-KS--DIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~-~~--evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+++.++.++++||+.||+..- .. .+..++-+.+++.|+++.+ ++.-.. .. +-+...|+ ..+
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~-~~---~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~g~~~~~~~~--------~~~-- 80 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFP-YN---YSTLQIQKQLEQNHLTLAL-FNTAPGDINAGEWGLSALP--------GRE-- 80 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCC-TT---SCHHHHHHHHHHTTCEEEE-EECCCCCGGGTCSCSTTCT--------TCH--
T ss_pred CHHHHHHHHHHhCCCEEEecCC-CC---CCHHHHHHHHHHcCCceEE-EecCCcccccccCCCCCCh--------hHH--
Confidence 6888899999999999999852 12 2345677888999999765 322100 00 00000011 100
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccH-------HHHH---HHHhccCCCceEEecC----------
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIA---KVIGRLGLEKTMFEAT---------- 238 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~-------d~v~---~ii~~l~~eklifEAP---------- 238 (289)
....+.+.+.++..-+.||..|.+-+ |.+.. +.-+. +.+. +.++..|+ ++.+|.=
T Consensus 81 --~~~~~~~~~~i~~a~~lG~~~v~~~~-g~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~~E~~~~~~~~~~~~ 155 (260)
T 1k77_A 81 --HEAHADIDLALEYALALNCEQVHVMA-GVVPA-GEDAERYRAVFIDNIRYAADRFAPHGK-RILVEALSPGVKPHYLF 155 (260)
T ss_dssp --HHHHHHHHHHHHHHHHTTCSEEECCC-CBCCT-TSCHHHHHHHHHHHHHHHHHHHGGGTC-EEEECCCCTTTSTTBSC
T ss_pred --HHHHHHHHHHHHHHHHcCCCEEEECc-CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEeCCccCCCcCcc
Confidence 11245555666666678999998854 22211 11111 1222 23334454 5777753
Q ss_pred -CchhHHHHHHHhCC-CcccccCCCC
Q 022982 239 -NPRTSEWFIRRYGP-KVNLFVDHSQ 262 (289)
Q Consensus 239 -~k~qQ~~~I~~fG~-~VNLgI~~~e 262 (289)
...+-..++++.|+ +|-+..|..+
T Consensus 156 ~~~~~~~~l~~~~~~~~~g~~~D~~h 181 (260)
T 1k77_A 156 SSQYQALAIVEEVARDNVFIQLDTFH 181 (260)
T ss_dssp CSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred CCHHHHHHHHHHhCCCCEEEEeeHHH
Confidence 33467788999985 4544344433
No 156
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=84.01 E-value=15 Score=33.91 Aligned_cols=162 Identities=15% Similarity=0.131 Sum_probs=95.0
Q ss_pred hhHHHHHHHhhccc--ccEEEecCccccc-cChhHHHHHH-HHHH--hCCceecC----CcHHHHHHHhCCchHHHHHHH
Q 022982 40 HNVLEDIFESMGQF--VDGLKFSGGSHSL-MPKPFIEEVV-KRAH--QHDVYVST----GDWAEHLIRNGPSAFKEYVED 109 (289)
Q Consensus 40 ~~~~~DlLe~ag~y--ID~lKfg~GTs~l-~p~~~l~eKI-~l~~--~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~ 109 (289)
...++.+++.|-+- ==++-++-|+... .+.+.+...+ .+++ .++|+|.. |..+|. +..
T Consensus 31 ~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~------------i~~ 98 (288)
T 3q94_A 31 LEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEK------------CKE 98 (288)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHH------------HHH
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHH------------HHH
Confidence 44445555444321 0134444444443 2444444443 3555 56676664 344553 445
Q ss_pred HHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHH
Q 022982 110 CKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLL 187 (289)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
|-+.||+.|=+.--..++.+- .=.++++.+...|.-|--|+|.= |-++|..- . ......||++.
T Consensus 99 ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~v------gG~Ed~~~----~----~~~~yT~Peea 164 (288)
T 3q94_A 99 AIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTV------GGQEDDVI----A----EGVIYADPAEC 164 (288)
T ss_dssp HHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBC------BCSCSSCG----G----GGCBCCCHHHH
T ss_pred HHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeee------ccccCCcC----C----ccccCCCHHHH
Confidence 677899999996555443321 12367788889999999999982 11222100 0 00011268777
Q ss_pred HHHHHHHHHccCcEEEEe---ccccccCCCCccHHHHHHHHhccCC
Q 022982 188 IRRAERCLEAGADMIMID---SDDVCKHADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiE---arGI~d~~G~~r~d~v~~ii~~l~~ 230 (289)
.+.++ +-|.|.+=+= +-|.|..+-.++.|.+++|-+.++.
T Consensus 165 ~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~v 207 (288)
T 3q94_A 165 KHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGV 207 (288)
T ss_dssp HHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCS
T ss_pred HHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCC
Confidence 77666 5788876553 2389988888999999999887753
No 157
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=83.49 E-value=5.4 Score=36.80 Aligned_cols=79 Identities=10% Similarity=0.102 Sum_probs=57.5
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G-~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
+.+.++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+.- =++.-=+|+ |
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-------g---------------- 88 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV-------G---------------- 88 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC-------C----------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------C----------------
Confidence 3688889999999999997765443 699999999999998841 011111122 1
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
..+..+.|++++..-++|||.|++=.
T Consensus 89 ----~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 89 ----AHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp ----CSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred ----CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 11477889999999999999999854
No 158
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=83.47 E-value=6.7 Score=36.11 Aligned_cols=98 Identities=19% Similarity=0.188 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~ 170 (289)
-+-.+..-+.|..+|-|-|+.. -+|.++.++-|+.+++.+-. +.|-++- ..|..
T Consensus 93 ~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~--~~~~i~a-------Rtda~---- 159 (290)
T 2hjp_A 93 HYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD--RDFVVIA-------RVEAL---- 159 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS--TTSEEEE-------EECTT----
T ss_pred HHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc--CCcEEEE-------eehHh----
Confidence 3334444458999999999863 36777777788877776432 3344421 11210
Q ss_pred cccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
+. ....++.|++++...+||||.|.+|++ -...+++.+|.+.++
T Consensus 160 -----~a---~~g~~~ai~Ra~ay~eAGAd~i~~e~~-------~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 160 -----IA---GLGQQEAVRRGQAYEEAGADAILIHSR-------QKTPDEILAFVKSWP 203 (290)
T ss_dssp -----TT---TCCHHHHHHHHHHHHHTTCSEEEECCC-------CSSSHHHHHHHHHCC
T ss_pred -----hc---cccHHHHHHHHHHHHHcCCcEEEeCCC-------CCCHHHHHHHHHHcC
Confidence 00 113789999999999999999999983 122467888888777
No 159
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=83.40 E-value=11 Score=34.12 Aligned_cols=170 Identities=17% Similarity=0.162 Sum_probs=101.4
Q ss_pred CCCCceeEecCCCCCCCchhHHHHHHHhhccccc---EEEecCccccccC----hhHHHHHHHHHHhCCceecC--C-cH
Q 022982 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD---GLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVST--G-DW 91 (289)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID---~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~v~~--G-tl 91 (289)
+..|++-++-+|. .+...+..++.+..|=+ .+..+.|-+.-.. ++.+.+..+++++..|.--+ | .+
T Consensus 27 ~~~gV~~~v~~g~----~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaIGEiGLD~ 102 (287)
T 3rcm_A 27 LEAGVTQMLLTGT----SLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGECGLDF 102 (287)
T ss_dssp HHTTEEEEEECCC----SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEEEEEEEET
T ss_pred HHcCCeEEEEecC----CHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEEEEeeeCC
Confidence 4679999999998 66688888888888865 4777777665432 34466655666554432211 2 12
Q ss_pred H----HHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022982 92 A----EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (289)
Q Consensus 92 f----E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~ 167 (289)
. ....++. .|.+-++.|+++|...+==+-. ..+ ++++.+++.+.. +.-++-...+ | +
T Consensus 103 ~~~~~~~~~Q~~--~F~~ql~lA~e~~lPv~iH~r~----a~~---~~l~il~~~~~~--~~~~V~H~fs--G---~--- 163 (287)
T 3rcm_A 103 NRDFSPRPLQEK--ALEAQLTLAAQLRLPVFLHERD----ASE---RLLAILKDYRDH--LTGAVVHCFT--G---E--- 163 (287)
T ss_dssp TTCSSCHHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHHTTGGG--CSCEEECSCC--C---C---
T ss_pred CcccCcHHHHHH--HHHHHHHHHHHhCCCEEEEcCC----cHH---HHHHHHHHcCCC--CCeEEEEeCC--C---C---
Confidence 1 1123343 7999999999999887632332 223 455555554322 1113321111 1 0
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc-cccCCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD-VCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG-I~d~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
.+++++.++.|.+.=+- | ++.. -|...+.++++.+|++||++|...|
T Consensus 164 --------------------~e~a~~~l~~G~yis~~---g~i~~~---k~~~~l~~~v~~ip~drlLlETD~P 211 (287)
T 3rcm_A 164 --------------------REALFAYLDLDLHIGIT---GWICDE---RRGTHLHPLVGNIPEGRLMLESDAP 211 (287)
T ss_dssp --------------------HHHHHHHHHTTCEEEEC---GGGGCT---TTCGGGHHHHTTSCTTSEEECCCTT
T ss_pred --------------------HHHHHHHHHCCcEEEEC---chhccc---cCHHHHHHHHHhcCCccEEEeccCC
Confidence 46777888899654332 4 2221 1223467888999999999998755
No 160
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=83.26 E-value=2.1 Score=39.65 Aligned_cols=147 Identities=14% Similarity=0.222 Sum_probs=79.6
Q ss_pred hcccccEEEecCccccccChhHHHHHHHHHHhCCc--eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe-cCCccc
Q 022982 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV--YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL-NVGSLE 126 (289)
Q Consensus 50 ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV--~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI-SdGti~ 126 (289)
..+|+|++|+|-+... +.+.|++ +. +.|. .+..|... .++.+..-++++++-|-+-|=+ --|+ +
T Consensus 107 l~~~vd~lqIgA~~~~--n~~LLr~-va---~~gkPVilK~G~~~------t~~ei~~ave~i~~~Gn~~i~L~erg~-~ 173 (285)
T 3sz8_A 107 VAEIADVLQVPAFLAR--QTDLVVA-IA---KAGKPVNVKKPQFM------SPTQLKHVVSKCGEVGNDRVMLCERGS-S 173 (285)
T ss_dssp HHTTCSEEEECGGGTT--CHHHHHH-HH---HTSSCEEEECCTTS------CGGGTHHHHHHHHHTTCCCEEEEECCE-E
T ss_pred HHHhCCEEEECccccC--CHHHHHH-HH---ccCCcEEEeCCCCC------CHHHHHHHHHHHHHcCCCcEEEEeCCC-C
Confidence 4578999999865443 3335554 33 3455 44567530 1113344455556666653333 2233 2
Q ss_pred CChhH---HHHHHHHHHHc--CCcccceeeeecCCCCC---CCccccccccccccCCCCccccccHHHHHHHHHHHHHcc
Q 022982 127 IPEET---LLRYVRLVKSA--GLKAKPKFAVMFNKSDI---PSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG 198 (289)
Q Consensus 127 i~~~~---r~~lI~~~~~~--G~~v~~E~g~k~~~~ev---g~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG 198 (289)
-+..+ -++.|..+++. |+. ++. ++...+ |..+.. +-| ..+.++..+...+.+|
T Consensus 174 y~~~~~~vdl~~i~~lk~~~~~~p----V~~-D~sHs~q~p~~~~~~------------s~G--~r~~v~~~a~AAvA~G 234 (285)
T 3sz8_A 174 FGYDNLVVDMLGFRQMAETTGGCP----VIF-DVTHSLQCRDPLGDA------------SGG--RRRQVLDLARAGIAVG 234 (285)
T ss_dssp CSSSCEECCTTHHHHHHHHTTSCC----EEE-ETTTTCC-----------------------------HHHHHHHHHHHC
T ss_pred CCCCcCccCHHHHHHHHHhCCCCC----EEE-eCCCccccCCCcCCC------------CCC--chhhHHHHHHHHHHhC
Confidence 22222 24567777775 444 333 111111 000000 000 1344577889999999
Q ss_pred CcEEEEecc-----ccccCCCCccHHHHHHHHhcc
Q 022982 199 ADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 199 A~~ViiEar-----GI~d~~G~~r~d~v~~ii~~l 228 (289)
|+-+|||-- -+.|..-.+..+.++++++.+
T Consensus 235 A~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i 269 (285)
T 3sz8_A 235 IAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQM 269 (285)
T ss_dssp CSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHH
T ss_pred CCEEEEEeccChhccCCchhhccCHHHHHHHHHHH
Confidence 999999983 678888889988888888654
No 161
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=83.23 E-value=7.1 Score=35.21 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=63.2
Q ss_pred HcCCCEEEecCCc-----ccCChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 112 QVGFDTIELNVGS-----LEIPEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 112 ~lGF~~IEISdGt-----i~i~~~~r~~lI~~~~~~----G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.|..+|-|=||. --+|.++.++-|+.+++. |.. |-+.- . .|. + +. ... ....
T Consensus 104 ~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~----~~v~a-R------td~-~---~~--g~~-~~~~ 165 (255)
T 2qiw_A 104 EAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVD----VVING-R------TDA-V---KL--GAD-VFED 165 (255)
T ss_dssp HTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCC----CEEEE-E------ECH-H---HH--CTT-TSSS
T ss_pred HcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCC----eEEEE-E------ech-h---hc--cCC-cchH
Confidence 4899999999986 235677788888888776 543 22210 0 010 0 00 000 0001
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC-CCceE
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG-LEKTM 234 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~-~ekli 234 (289)
..++.|++++...+|||+.|.+|+- ...+++.+|.+.++ +-+++
T Consensus 166 ~~~~ai~ra~a~~eAGAd~i~~e~~--------~~~~~~~~i~~~~~~P~n~~ 210 (255)
T 2qiw_A 166 PMVEAIKRIKLMEQAGARSVYPVGL--------STAEQVERLVDAVSVPVNIT 210 (255)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCC--------CSHHHHHHHHTTCSSCBEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEcCC--------CCHHHHHHHHHhCCCCEEEE
Confidence 2789999999999999999999973 23588999998887 44444
No 162
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=83.05 E-value=3.5 Score=36.90 Aligned_cols=163 Identities=15% Similarity=0.212 Sum_probs=89.6
Q ss_pred ccccccChhHHHHHHHHHHhCCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 022982 62 GSHSLMPKPFIEEVVKRAHQHDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (289)
Q Consensus 62 GTs~l~p~~~l~eKI~l~~~~gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (289)
||--+|=++...+..+..++++| .|.-+. +++...+..+.|-+-|+++|||.-- ...-.+.|+.++
T Consensus 14 ~~~~~~~~~~m~~~~~~l~~~~vv~Vir~~--------~~~~a~~~a~al~~gGi~~iEvt~~-----t~~a~e~I~~l~ 80 (232)
T 4e38_A 14 GTENLYFQSMMSTINNQLKALKVIPVIAID--------NAEDIIPLGKVLAENGLPAAEITFR-----SDAAVEAIRLLR 80 (232)
T ss_dssp ------CCCCHHHHHHHHHHHCEEEEECCS--------SGGGHHHHHHHHHHTTCCEEEEETT-----STTHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHhCCEEEEEEcC--------CHHHHHHHHHHHHHCCCCEEEEeCC-----CCCHHHHHHHHH
Confidence 55556655667777888888898 555452 2234556667788889999999433 334568888887
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc-----------cc
Q 022982 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-----------DV 209 (289)
Q Consensus 141 ~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-----------GI 209 (289)
+. .|+.-+ | - |..++ .++++..++|||+.|+.=+- |+
T Consensus 81 ~~----~~~~~i-------G--a----GTVlt---------------~~~a~~Ai~AGA~fIvsP~~~~~vi~~~~~~gi 128 (232)
T 4e38_A 81 QA----QPEMLI-------G--A----GTILN---------------GEQALAAKEAGATFVVSPGFNPNTVRACQEIGI 128 (232)
T ss_dssp HH----CTTCEE-------E--E----ECCCS---------------HHHHHHHHHHTCSEEECSSCCHHHHHHHHHHTC
T ss_pred Hh----CCCCEE-------e--E----CCcCC---------------HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCC
Confidence 73 122222 1 0 11111 68899999999999985431 21
Q ss_pred ccCCCCccHHHHHHHHhccCCCceEEecCCchh-HHHHHHHh-C--CCccc---c-cCCCCchhhhhhhccc
Q 022982 210 CKHADSLRADIIAKVIGRLGLEKTMFEATNPRT-SEWFIRRY-G--PKVNL---F-VDHSQVMDLECLRGRN 273 (289)
Q Consensus 210 ~d~~G~~r~d~v~~ii~~l~~eklifEAP~k~q-Q~~~I~~f-G--~~VNL---g-I~~~eVl~LE~LR~g~ 273 (289)
-==-|-...+++.+-+ +.|.+-|-+ =|-..+ =..||+.+ | |++.+ | |.++++- |.|..|.
T Consensus 129 ~~ipGv~TptEi~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p~p~ip~~ptGGI~~~n~~--~~l~aGa 196 (232)
T 4e38_A 129 DIVPGVNNPSTVEAAL-EMGLTTLKF-FPAEASGGISMVKSLVGPYGDIRLMPTGGITPSNID--NYLAIPQ 196 (232)
T ss_dssp EEECEECSHHHHHHHH-HTTCCEEEE-CSTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHH--HHHTSTT
T ss_pred CEEcCCCCHHHHHHHH-HcCCCEEEE-CcCccccCHHHHHHHHHHhcCCCeeeEcCCCHHHHH--HHHHCCC
Confidence 1001222344444333 466666655 332222 13566654 3 36666 4 8877653 4455443
No 163
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=82.94 E-value=7.5 Score=36.77 Aligned_cols=146 Identities=17% Similarity=0.125 Sum_probs=96.3
Q ss_pred HHHHHHhhcccccEEEecCccccccCh----------hHHHHHHHHHHhCC--ceecCCcHHHHHHHhCCchHHHHHHHH
Q 022982 43 LEDIFESMGQFVDGLKFSGGSHSLMPK----------PFIEEVVKRAHQHD--VYVSTGDWAEHLIRNGPSAFKEYVEDC 110 (289)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GTs~l~p~----------~~l~eKI~l~~~~g--V~v~~GtlfE~a~~qg~~~~~~yl~~~ 110 (289)
++..+++ =+|.+-+-..+|-+..+ +.+++-++.++++| +.|... +|.+...+++.+-+..+.+
T Consensus 80 i~~a~~~---g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~--~ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 80 AKVAVET---GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS--AEDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHHHT---TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE--ETTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHc---CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE--EEeCCCCCHHHHHHHHHHH
Confidence 4444543 35666666566643332 45788899999999 766542 1223344555677778888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
.+. .+.|=|.|-.--+.+.+-.++|+.+++. |. .-.+++.+. .+ ...-+-
T Consensus 155 ~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~--~~~i~~H~H-nd-------------------------~GlAvA 205 (382)
T 2ztj_A 155 APY-VDRVGLADTVGVATPRQVYALVREVRRVVGP--RVDIEFHGH-ND-------------------------TGCAIA 205 (382)
T ss_dssp GGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTT--TSEEEEEEB-CT-------------------------TSCHHH
T ss_pred HHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCC--CCeEEEEeC-CC-------------------------ccHHHH
Confidence 899 9999998888888898888999999884 11 223555331 11 122367
Q ss_pred HHHHHHHccCcEEEEeccccccCCCCccHHHHH
Q 022982 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIA 222 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~ 222 (289)
.+...++|||+.|=.=-.|+=+..||...+.+-
T Consensus 206 N~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv 238 (382)
T 2ztj_A 206 NAYEAIEAGATHVDTTILGIGERNGITPLGGFL 238 (382)
T ss_dssp HHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHH
T ss_pred HHHHHHHhCCCEEEEccccccccccchhHHHHH
Confidence 777889999996544445888899999987664
No 164
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=82.79 E-value=3.9 Score=35.51 Aligned_cols=108 Identities=11% Similarity=0.117 Sum_probs=68.2
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCC-c------HHHH-------------HHHhCCc
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WAEH-------------LIRNGPS 101 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-t------lfE~-------------a~~qg~~ 101 (289)
..=+.+..+| .|.+=+.+.....++++.+++..++++++|+.+..- . +... ...+.-+
T Consensus 25 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 102 (290)
T 3tva_A 25 VHLEVAQDLK--VPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVA 102 (290)
T ss_dssp BCHHHHHHTT--CSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHH
T ss_pred HHHHHHHHcC--CCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHH
Confidence 4444555555 677777764443455677999999999999976542 1 1110 0000012
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hhH-------HHHHHHHHHHcCCcccceee
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EET-------LLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-~~~-------r~~lI~~~~~~G~~v~~E~g 151 (289)
.+++.++.|+++|.+.|=+..|...-. .+. ..++.+.+++.|+++.-|-.
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 689999999999999999987765322 222 33455667777887655554
No 165
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=82.78 E-value=4.4 Score=37.43 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCEEEe------cCCcccCChhHHHHHHHHHHHcCCcccceeeee
Q 022982 104 KEYVEDCKQVGFDTIEL------NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVM 153 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEI------SdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (289)
++.++.+|++|+++|-+ +.|..+ .+.-++++++++++||+|.-.|...
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d--~~~~~~~~~~ak~~Gl~v~ld~hys 83 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYD--LDYNLELAKRVKAAGMSLYLDLHLS 83 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTC--HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccC--HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 45688899999999999 355444 5667789999999999999988764
No 166
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=82.45 E-value=30 Score=31.80 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=88.3
Q ss_pred EEEecCccccccChh-HHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh
Q 022982 56 GLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE 130 (289)
Q Consensus 56 ~lKfg~GTs~l~p~~-~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~ 130 (289)
++-++-|+...++.+ ...--..++++++|+|.. |. + .+.+..|-+.||+.|=+.--.. |.+
T Consensus 46 Ilq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~-----------~-~e~i~~ai~~GFtSVMiDgS~l--p~e 111 (286)
T 1gvf_A 46 ILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHE-----------S-LDDIRRKVHAGVRSAMIDGSHF--PFA 111 (286)
T ss_dssp EEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEEC-----------C-HHHHHHHHHTTCCEEEECCTTS--CHH
T ss_pred EEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCC-----------C-HHHHHHHHHcCCCeEEECCCCC--CHH
Confidence 355555554444422 223333455667776664 31 1 2556677789999998866554 444
Q ss_pred HH----HHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 131 TL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 131 ~r----~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
+= .++++.+...|.-|--|+|.= |-.+|..-. .. ..+ ...||++..+.++ +-|.|.+=+==
T Consensus 112 eNi~~Tk~vv~~ah~~gvsVEaElG~v------gg~ed~~~~---~~--~~~-~~T~Peea~~Fv~---~TgvD~LAvai 176 (286)
T 1gvf_A 112 ENVKLVKSVVDFCHSQDCSVEAELGRL------GGVEDDMSV---DA--ESA-FLTDPQEAKRFVE---LTGVDSLAVAI 176 (286)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEESCC------C----------------CC-SSCCHHHHHHHHH---HHCCSEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEEeec------cCcccCccc---cc--ccc-cCCCHHHHHHHHH---HHCCCEEEeec
Confidence 32 467788888999999999983 211221000 00 000 1126888877777 47888554432
Q ss_pred ---cccccCCCCccHHHHHHHHhccCC
Q 022982 207 ---DDVCKHADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 207 ---rGI~d~~G~~r~d~v~~ii~~l~~ 230 (289)
-|+|..+-.++.|.+++|-+.+++
T Consensus 177 Gt~HG~Y~~~p~Ld~~~L~~I~~~~~v 203 (286)
T 1gvf_A 177 GTAHGLYSKTPKIDFQRLAEIREVVDV 203 (286)
T ss_dssp SCCSSCCSSCCCCCHHHHHHHHHHCCS
T ss_pred CccccCcCCCCccCHHHHHHHHHhcCC
Confidence 289998888999999999988763
No 167
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=82.33 E-value=12 Score=34.81 Aligned_cols=83 Identities=22% Similarity=0.312 Sum_probs=49.2
Q ss_pred HHHHH---HHHHHcCCCEEEecCCc-------c-----------cCChhHHH----HHHHHHHHcCCcccceeeeecCCC
Q 022982 103 FKEYV---EDCKQVGFDTIELNVGS-------L-----------EIPEETLL----RYVRLVKSAGLKAKPKFAVMFNKS 157 (289)
Q Consensus 103 ~~~yl---~~~k~lGF~~IEISdGt-------i-----------~i~~~~r~----~lI~~~~~~G~~v~~E~g~k~~~~ 157 (289)
+++|. +.|++.|||.|||.-+. + -=+.+.|. ++|+.+++.= ..-+++|....
T Consensus 143 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v---~~pv~vRls~~ 219 (340)
T 3gr7_A 143 VQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW---DGPLFVRISAS 219 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEEEESC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc---CCceEEEeccc
Confidence 44554 45678899999998652 0 12345554 4555665531 12266665322
Q ss_pred CCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 158 DIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 158 evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
+ +...+. +.++.++.++..-++|+++|-+=.
T Consensus 220 ~-----------------~~~~g~-~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 220 D-----------------YHPDGL-TAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp C-----------------CSTTSC-CGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred c-----------------ccCCCC-CHHHHHHHHHHHHHcCCCEEEEec
Confidence 1 111111 466678888888899999998843
No 168
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=82.21 E-value=2.5 Score=36.20 Aligned_cols=37 Identities=5% Similarity=-0.090 Sum_probs=28.3
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHH
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEV 75 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eK 75 (289)
.+....++++.+++|+|++|.|.|-+.-+..+.+++.
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv~~~~f~~~G~~~i~~l 50 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDL 50 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHH
T ss_pred CHHHHHHHHHHhcccCCEEEECHHHHHHhCHHHHHHH
Confidence 4567788889899999999999997765665655543
No 169
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.21 E-value=26 Score=31.00 Aligned_cols=102 Identities=16% Similarity=0.238 Sum_probs=63.2
Q ss_pred hhHHHHHHHhhccc-ccEEEecCccc-cccChhHHH-----------------HHHHHHHhC--CceecCCcHHHHHHHh
Q 022982 40 HNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRN 98 (289)
Q Consensus 40 ~~~~~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~--gV~v~~GtlfE~a~~q 98 (289)
+..+.++++..-+. +|.+-+|.=-+ .+++-..+. +-++-.+++ ++++-.=+...-++..
T Consensus 30 ~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~ 109 (268)
T 1qop_A 30 IEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNN 109 (268)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHh
Confidence 34555555554444 99999986221 122223333 445555665 3333210233344444
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+++|++.|.+.|.|.|=+.| ++.++..++++.++++|+++.+
T Consensus 110 ---g~~~~~~~~~~aGadgii~~d----~~~e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 110 ---GIDAFYARCEQVGVDSVLVAD----VPVEESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp ---CHHHHHHHHHHHTCCEEEETT----CCGGGCHHHHHHHHHTTCEEEC
T ss_pred ---hHHHHHHHHHHcCCCEEEEcC----CCHHHHHHHHHHHHHcCCcEEE
Confidence 479999999999999888864 4456777899999999887543
No 170
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=82.12 E-value=0.86 Score=40.24 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=60.6
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHh-CCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ-HDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~-~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+.....+++..++|+|++|+|.+-..-+..+.+++ .++ +|..+..-- +.. -|+.++.|.+.+.++|.|
T Consensus 23 ~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~----l~~~~g~~v~lD~Kl~D-----ipnTv~~~~~~~~~~gad 93 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAE----FRKRFGCRIIADFKVAD-----IPETNEKICRATFKAGAD 93 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEEHHHHHHHCTHHHHH----HHHHHCCEEEEEEEECS-----CHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCcccEEEEcHHHHHhcCHHHHHH----HHhcCCCeEEEEEeecc-----cHhHHHHHHHHHHhCCCC
Confidence 567888999999999999999887765556565554 333 444443321 211 133567777777888888
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCC
Q 022982 117 TIELNVGSLEIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (289)
.|-|.- ....+....+++.+++.|-
T Consensus 94 ~vtvh~---~~G~~~l~~~~~~~~~~g~ 118 (228)
T 3m47_A 94 AIIVHG---FPGADSVRACLNVAEEMGR 118 (228)
T ss_dssp EEEEES---TTCHHHHHHHHHHHHHHTC
T ss_pred EEEEec---cCCHHHHHHHHHHHHhcCC
Confidence 887753 2234555566777666553
No 171
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=82.11 E-value=1.1 Score=40.23 Aligned_cols=97 Identities=12% Similarity=0.199 Sum_probs=58.4
Q ss_pred HHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH--HHHHHHHHHHc--CCcc
Q 022982 73 EEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET--LLRYVRLVKSA--GLKA 146 (289)
Q Consensus 73 ~eKI~l~~~~gV~v~~G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~--r~~lI~~~~~~--G~~v 146 (289)
.+-++.++++|+++.|| |.-|+. .+.++|+|+|-+ .|.+. =..+|+.++.- ...+
T Consensus 117 ~~vi~~~~~~gi~~ipGv~TptEi~-------------~A~~~Gad~vK~------FPa~~~gG~~~lkal~~p~p~ip~ 177 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPGVNNPSTVE-------------AALEMGLTTLKF------FPAEASGGISMVKSLVGPYGDIRL 177 (232)
T ss_dssp HHHHHHHHHHTCEEECEECSHHHHH-------------HHHHTTCCEEEE------CSTTTTTHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHcCCCEEcCCCCHHHHH-------------HHHHcCCCEEEE------CcCccccCHHHHHHHHHHhcCCCe
Confidence 45566677777777776 455543 235789999977 22222 13677777762 2333
Q ss_pred cceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccC----CCCccHHHHH
Q 022982 147 KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH----ADSLRADIIA 222 (289)
Q Consensus 147 ~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~----~G~~r~d~v~ 222 (289)
.|.=|+ + .+.+...|++||..+.+ +.-+++. +|+| +.|.
T Consensus 178 ~ptGGI-------------------~---------------~~n~~~~l~aGa~~~vg-Gs~l~~~~~i~~~~~--~~i~ 220 (232)
T 4e38_A 178 MPTGGI-------------------T---------------PSNIDNYLAIPQVLACG-GTWMVDKKLVTNGEW--DEIA 220 (232)
T ss_dssp EEBSSC-------------------C---------------TTTHHHHHTSTTBCCEE-ECGGGCHHHHHTTCH--HHHH
T ss_pred eeEcCC-------------------C---------------HHHHHHHHHCCCeEEEE-CchhcChHHhhcCCH--HHHH
Confidence 333233 0 25678899999999888 6667654 4553 4444
Q ss_pred HHH
Q 022982 223 KVI 225 (289)
Q Consensus 223 ~ii 225 (289)
+.+
T Consensus 221 ~~a 223 (232)
T 4e38_A 221 RLT 223 (232)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 172
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=81.54 E-value=2.5 Score=39.34 Aligned_cols=161 Identities=14% Similarity=0.124 Sum_probs=99.3
Q ss_pred CCCceeEecCCCCCCCchhHHHHHHHh-hcccccEEEecCccccccC-hhHHHHHHHHHHh-CCceec---C---Cc---
Q 022982 23 RFGVTEMRSPHYTLSSSHNVLEDIFES-MGQFVDGLKFSGGSHSLMP-KPFIEEVVKRAHQ-HDVYVS---T---GD--- 90 (289)
Q Consensus 23 ~~GlT~V~DkGl~~~~g~~~~~DlLe~-ag~yID~lKfg~GTs~l~p-~~~l~eKI~l~~~-~gV~v~---~---Gt--- 90 (289)
..|+-.++||-=. .+..+..+++. +-...|.+=+| |.-++. ++.+.+-++.+++ +++++. | |.
T Consensus 38 ~~~~~~liDPdK~---~~~~~~~~~~~~~~sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~ 112 (286)
T 3vk5_A 38 QPGPVHIIDPFKV---PVTEAVEKAAELTRLGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFP 112 (286)
T ss_dssp CCEEEEEECTTTS---CHHHHHHHHHHHHHTTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSC
T ss_pred cCCceEEECCCCC---CcHHHHHHHHHHHhcCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccc
Confidence 5688899999652 23333334443 44458999998 544540 5679999999999 787443 3 21
Q ss_pred --------------------H----HHHHHH---------------------h----------------CCchH--HHHH
Q 022982 91 --------------------W----AEHLIR---------------------N----------------GPSAF--KEYV 107 (289)
Q Consensus 91 --------------------l----fE~a~~---------------------q----------------g~~~~--~~yl 107 (289)
| +|+... - .++.. ..|-
T Consensus 113 i~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa 192 (286)
T 3vk5_A 113 VVRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYL 192 (286)
T ss_dssp CCTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHH
T ss_pred cccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHH
Confidence 2 233321 0 12233 6899
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc---CCcccceeeeecCCCCCCCccccccccccccCCCCccccccH
Q 022982 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA---GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDV 184 (289)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~---G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~ 184 (289)
....++|+..|=+.-+.-. .-.++|+++++. ...+.--+|+. +
T Consensus 193 ~~gad~G~~lV~LD~~~~~----v~~e~V~~I~~~~~~~iPV~vGGGIr------------------s------------ 238 (286)
T 3vk5_A 193 HVARAFGFHMVYLYSRNEH----VPPEVVRHFRKGLGPDQVLFVSGNVR------------------S------------ 238 (286)
T ss_dssp HHHHHTTCSEEEEECSSSC----CCHHHHHHHHHHSCTTCEEEEESSCC------------------S------------
T ss_pred HHHHHcCCCEEEEcCCCCc----CCHHHHHHHHHhcCCCCCEEEEeCCC------------------C------------
Confidence 9999999999988865522 223677777764 12333333331 1
Q ss_pred HHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 185 DLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 185 ~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
.+++++.+++|||.|+|=+- ++++. -.+++.+++.+.+
T Consensus 239 ---~Eda~~ll~aGAD~VVVGSA-av~d~---~Pelv~e~a~~~~ 276 (286)
T 3vk5_A 239 ---GRQVTEYLDSGADYVGFAGA-LEQPD---WRSALAEIAGRRP 276 (286)
T ss_dssp ---HHHHHHHHHTTCSEEEESGG-GSSTT---HHHHHHHHHC---
T ss_pred ---HHHHHHHHHcCCCEEEECch-hhcCC---CHHHHHHHHHhCC
Confidence 57888899999999999664 33332 2477888886653
No 173
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=81.42 E-value=20 Score=30.21 Aligned_cols=122 Identities=13% Similarity=0.207 Sum_probs=70.8
Q ss_pred hhHHHHHHHhhcccccEEEecCccccccCh-hHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK-PFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~l~p~-~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
..+++.+++.-. |++=++ +.++.++ +.+.+-++.+|++ |..+..+. ...++ ...+.+.|.|
T Consensus 78 ~~~i~~~~~~Ga---d~v~l~--~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~----------~t~~e-~~~~~~~G~d 141 (223)
T 1y0e_A 78 SKEVDELIESQC---EVIALD--ATLQQRPKETLDELVSYIRTHAPNVEIMADI----------ATVEE-AKNAARLGFD 141 (223)
T ss_dssp HHHHHHHHHHTC---SEEEEE--CSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC----------SSHHH-HHHHHHTTCS
T ss_pred HHHHHHHHhCCC---CEEEEe--eecccCcccCHHHHHHHHHHhCCCceEEecC----------CCHHH-HHHHHHcCCC
Confidence 345666555443 555554 4444433 4578888888888 87665431 12333 3347889999
Q ss_pred EEEecCC-cc----cCC-hhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 117 TIELNVG-SL----EIP-EETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 117 ~IEISdG-ti----~i~-~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
+|=++.. +. ... .....++++++++. +..+...=|+ .+ .+
T Consensus 142 ~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI-----------------------------~~----~~ 188 (223)
T 1y0e_A 142 YIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNV-----------------------------IT----PD 188 (223)
T ss_dssp EEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSC-----------------------------CS----HH
T ss_pred EEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCC-----------------------------CC----HH
Confidence 9987653 21 111 23345677777763 2222222122 01 46
Q ss_pred HHHHHHHccCcEEEEecccccc
Q 022982 190 RAERCLEAGADMIMIDSDDVCK 211 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d 211 (289)
.+++.+++||+.|++ ++.|++
T Consensus 189 ~~~~~~~~Gad~v~v-G~al~~ 209 (223)
T 1y0e_A 189 MYKRVMDLGVHCSVV-GGAITR 209 (223)
T ss_dssp HHHHHHHTTCSEEEE-CHHHHC
T ss_pred HHHHHHHcCCCEEEE-ChHHcC
Confidence 667778899999999 566876
No 174
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=81.21 E-value=9.8 Score=35.06 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=62.8
Q ss_pred HHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccc
Q 022982 107 VEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~ 173 (289)
.+...+.|..+|-|=|+.. -+|.++.++-|+.+++.+- .+.|-++- ..|..
T Consensus 100 v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~--~~~~~i~a-------Rtda~------- 163 (295)
T 1s2w_A 100 VRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQT--DPDFCIVA-------RVEAF------- 163 (295)
T ss_dssp HHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCS--STTCEEEE-------EECTT-------
T ss_pred HHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcc--cCCcEEEE-------eehHH-------
Confidence 4444468999999999862 2678888888888887652 23344421 11210
Q ss_pred CCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 174 ~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
+. ....++.|++++...+||||.|.+|+. -...+++.+|.+.++
T Consensus 164 --~a---~~g~~~ai~Ra~ay~eAGAd~i~~e~~-------~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 164 --IA---GWGLDEALKRAEAYRNAGADAILMHSK-------KADPSDIEAFMKAWN 207 (295)
T ss_dssp --TT---TCCHHHHHHHHHHHHHTTCSEEEECCC-------SSSSHHHHHHHHHHT
T ss_pred --hc---cccHHHHHHHHHHHHHcCCCEEEEcCC-------CCCHHHHHHHHHHcC
Confidence 00 013689999999999999999999961 112456666776654
No 175
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.16 E-value=7.7 Score=35.55 Aligned_cols=147 Identities=16% Similarity=0.117 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G-~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- =++.-=+|+ |
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-------g----------------- 85 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT-------S----------------- 85 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------C-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec-------C-----------------
Confidence 67788888888999998775333 4799999999999998841 011111122 1
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEec-------c---------------------ccccC---CCCccHHHHHHHHh
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDS-------D---------------------DVCKH---ADSLRADIIAKVIG 226 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEa-------r---------------------GI~d~---~G~~r~d~v~~ii~ 226 (289)
..+..+.|++++..-++|||.|++=. + -||+. .-++..+.+.++.+
T Consensus 86 ---~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 86 ---HYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp ---CSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred ---CchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 11477789999999999999998842 1 14553 23566777777775
Q ss_pred ccC-CCceEEecCC-chhHHHHHHHhCCCcccccCCCCch-hhhhhhcccCC
Q 022982 227 RLG-LEKTMFEATN-PRTSEWFIRRYGPKVNLFVDHSQVM-DLECLRGRNLG 275 (289)
Q Consensus 227 ~l~-~eklifEAP~-k~qQ~~~I~~fG~~VNLgI~~~eVl-~LE~LR~g~~G 275 (289)
..| +-=+=.|++. -.+-..+++..+.++....+-+|-+ -+++|..|--|
T Consensus 163 ~~pnIvgiK~~~~~~~~~~~~~~~~~~~~~~~~~~G~d~~~l~~~l~~G~~G 214 (309)
T 3fkr_A 163 EIEQVAYFXIETPGAANKLRELIRLGGDAIEGPWDGEEAITLLADLHAGATG 214 (309)
T ss_dssp HSTTEEEEEECSSSHHHHHHHHHHHHGGGCCEEEECGGGTTHHHHHHTTCCE
T ss_pred hCCCEEEEECCCcchHHHHHHHHHhcCCceeeecCCchHHHHHHHHHCCCcE
Confidence 443 2112236654 3444556666554432112333443 35777766555
No 176
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=81.03 E-value=3.8 Score=36.25 Aligned_cols=131 Identities=17% Similarity=0.233 Sum_probs=71.4
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCce----ecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVY----VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~----v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
+++.+.+.-+++|-+. .-+ +.+ .+.+-++.+|++|+. +.|+|-.|.. ++|++ +.|.
T Consensus 72 ~i~~~~~aGAd~itvh---~Ea--~~~--~~~~~i~~i~~~G~k~gv~lnp~tp~~~~--------~~~l~-----~~D~ 131 (231)
T 3ctl_A 72 YIAQLARAGADFITLH---PET--ING--QAFRLIDEIRRHDMKVGLILNPETPVEAM--------KYYIH-----KADK 131 (231)
T ss_dssp THHHHHHHTCSEEEEC---GGG--CTT--THHHHHHHHHHTTCEEEEEECTTCCGGGG--------TTTGG-----GCSE
T ss_pred HHHHHHHcCCCEEEEC---ccc--CCc--cHHHHHHHHHHcCCeEEEEEECCCcHHHH--------HHHHh-----cCCE
Confidence 6677776666666443 111 012 488999999999987 5678765533 33332 4667
Q ss_pred EE---ecCCccc---CC-hhHHHHHHHHHH-HcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHH
Q 022982 118 IE---LNVGSLE---IP-EETLLRYVRLVK-SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIR 189 (289)
Q Consensus 118 IE---ISdGti~---i~-~~~r~~lI~~~~-~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~ 189 (289)
|- +.-|+-. +| .-+|.+-++... +.|+.+ .+.+-.+. . .+
T Consensus 132 VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~--~I~VdGGI---------------~---------------~~ 179 (231)
T 3ctl_A 132 ITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEY--EIEVDGSC---------------N---------------QA 179 (231)
T ss_dssp EEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCC--EEEEESCC---------------S---------------TT
T ss_pred EEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCc--eEEEECCc---------------C---------------HH
Confidence 75 4444331 22 223333344433 344432 24442211 0 24
Q ss_pred HHHHHHHccCcEEEEeccccccCCCCccHHHHHHHH
Q 022982 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVI 225 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii 225 (289)
.+...++||||.+++=.+.||.+... ..+.++++-
T Consensus 180 ~~~~~~~aGAd~~V~G~saif~~~d~-~~~~~~~l~ 214 (231)
T 3ctl_A 180 TYEKLMAAGADVFIVGTSGLFNHAEN-IDEAWRIMT 214 (231)
T ss_dssp THHHHHHHTCCEEEECTTTTGGGCSS-HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEccHHHhCCCCc-HHHHHHHHH
Confidence 55667899999988853789986432 234455553
No 177
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=80.87 E-value=9.3 Score=31.90 Aligned_cols=110 Identities=17% Similarity=0.205 Sum_probs=64.7
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (289)
.+.+.+..++.-. |++ ++.+. + .+-++.+|++|+++.+|.. . .+-...+.++|.+.|
T Consensus 72 ~~~~~~~a~~~Ga---d~i-v~~~~----~----~~~~~~~~~~g~~vi~g~~----------t-~~e~~~a~~~Gad~v 128 (205)
T 1wa3_A 72 SVEQCRKAVESGA---EFI-VSPHL----D----EEISQFCKEKGVFYMPGVM----------T-PTELVKAMKLGHTIL 128 (205)
T ss_dssp SHHHHHHHHHHTC---SEE-ECSSC----C----HHHHHHHHHHTCEEECEEC----------S-HHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHcCC---CEE-EcCCC----C----HHHHHHHHHcCCcEECCcC----------C-HHHHHHHHHcCCCEE
Confidence 4556666666444 555 66542 3 3567789999999999731 1 112446688999999
Q ss_pred EecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHH
Q 022982 119 ELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (289)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLe 196 (289)
-+.... ....+.++.+++. ...+.+.=|+ + .+.+...++
T Consensus 129 k~~~~~-----~~g~~~~~~l~~~~~~~pvia~GGI------------------------------~----~~~~~~~~~ 169 (205)
T 1wa3_A 129 KLFPGE-----VVGPQFVKAMKGPFPNVKFVPTGGV------------------------------N----LDNVCEWFK 169 (205)
T ss_dssp EETTHH-----HHHHHHHHHHHTTCTTCEEEEBSSC------------------------------C----TTTHHHHHH
T ss_pred EEcCcc-----ccCHHHHHHHHHhCCCCcEEEcCCC------------------------------C----HHHHHHHHH
Confidence 875421 1234566666652 1111111111 0 135566789
Q ss_pred ccCcEEEEecccccc
Q 022982 197 AGADMIMIDSDDVCK 211 (289)
Q Consensus 197 AGA~~ViiEarGI~d 211 (289)
+||+.|.+ ++.++.
T Consensus 170 ~Ga~~v~v-Gs~i~~ 183 (205)
T 1wa3_A 170 AGVLAVGV-GSALVK 183 (205)
T ss_dssp HTCSCEEE-CHHHHC
T ss_pred CCCCEEEE-CccccC
Confidence 99999988 455776
No 178
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=80.87 E-value=6.5 Score=36.18 Aligned_cols=99 Identities=18% Similarity=0.305 Sum_probs=57.7
Q ss_pred chhHHHHHHHhhcccc----------cEEEecCcccc-------ccChhHHHHHHHHHHhCCc---eecC-CcHHHHHHH
Q 022982 39 SHNVLEDIFESMGQFV----------DGLKFSGGSHS-------LMPKPFIEEVVKRAHQHDV---YVST-GDWAEHLIR 97 (289)
Q Consensus 39 g~~~~~DlLe~ag~yI----------D~lKfg~GTs~-------l~p~~~l~eKI~l~~~~gV---~v~~-GtlfE~a~~ 97 (289)
|..+.+.+|...-.+| -++|++.|-.+ ..| ++.-|+++++-|+ ++|| ||+--
T Consensus 123 gag~trg~L~~~~T~VNaLVSPTG~~G~VkISTGp~Sas~~~~~~V~---vetAiaml~dmG~~SvKffPM~Gl~~---- 195 (275)
T 3m6y_A 123 SVGATRANLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVP---IKTAIALVRDMGGNSLKYFPMKGLAH---- 195 (275)
T ss_dssp GHHHHHHHHTTCCCEEEEEEBCCSSTTEEECCCSTTGGGSSSCCEEE---HHHHHHHHHHHTCCEEEECCCTTTTT----
T ss_pred chHHHHhhcCCCccEEEEEEcCCCCcceEEeccCCCccccCCCceee---HHHHHHHHHHcCCCeeeEeecCCccc----
Confidence 5556666665444444 35678777322 333 6777777777776 6777 54310
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-cccee
Q 022982 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKF 150 (289)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~ 150 (289)
-+.+...-+.|.+-|| ++|=.-| |+.+...++++.+.++|-+ |.|.+
T Consensus 196 --leEl~avAkAca~~g~-~lEPTGG---Idl~Nf~~I~~i~l~aGv~~viPHI 243 (275)
T 3m6y_A 196 --EEEYRAVAKACAEEGF-ALEPTGG---IDKENFETIVRIALEANVEQVIPHV 243 (275)
T ss_dssp --HHHHHHHHHHHHHHTC-EEEEBSS---CCTTTHHHHHHHHHHTTCSCBCCEE
T ss_pred --HHHHHHHHHHHHHcCc-eECCCCC---ccHhHHHHHHHHHHHcCCCeecccc
Confidence 0023333456777777 7776544 4445555677777777765 66655
No 179
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=80.86 E-value=16 Score=33.34 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=63.2
Q ss_pred HHHHHcCCCEEEecCCcc-----cCChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 108 EDCKQVGFDTIELNVGSL-----EIPEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 108 ~~~k~lGF~~IEISdGti-----~i~~~~r~~lI~~~~~~----G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
+..-+.|..+|-|=|+.. -+|.++.++-|+.+++. |.. |-++- ..|. + .. .+..
T Consensus 99 ~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~----~~i~a-------Rtda-~---~~--~~g~ 161 (275)
T 2ze3_A 99 EHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVP----VFLNA-------RTDT-F---LK--GHGA 161 (275)
T ss_dssp HHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSC----CEEEE-------ECCT-T---TT--TCSS
T ss_pred HHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCC----eEEEE-------echh-h---hc--cccc
Confidence 334458999999999873 46777888888888775 433 33321 1111 0 00 0000
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
......++.|++++...+||||.|.+|+- ...+++.+|.+.++
T Consensus 162 ~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 162 TDEERLAETVRRGQAYADAGADGIFVPLA--------LQSQDIRALADALR 204 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEECTTC--------CCHHHHHHHHHHCS
T ss_pred cchhhHHHHHHHHHHHHHCCCCEEEECCC--------CCHHHHHHHHHhcC
Confidence 00012689999999999999999999973 23578888888776
No 180
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=80.83 E-value=3.9 Score=41.67 Aligned_cols=90 Identities=17% Similarity=0.327 Sum_probs=57.5
Q ss_pred hcccccEEEecCccc----cccChhHHHHHHHHHHhCCceecCCc-------------HHHHHHHhCCc----hHHHHHH
Q 022982 50 MGQFVDGLKFSGGSH----SLMPKPFIEEVVKRAHQHDVYVSTGD-------------WAEHLIRNGPS----AFKEYVE 108 (289)
Q Consensus 50 ag~yID~lKfg~GTs----~l~p~~~l~eKI~l~~~~gV~v~~Gt-------------lfE~a~~qg~~----~~~~yl~ 108 (289)
.=+|||..=. |+-+ .+.|+. -.-|+.||+|||+|. || |++-++.++.+ -+++.++
T Consensus 88 ~W~yvD~fvy-fshs~~~~~~~~P~--~~widaAHrnGV~Vl-Gt~~fe~~~~gg~~~~~~~lL~~~~~~~~~~a~kLv~ 163 (626)
T 2vtf_A 88 YWHYTDLMVY-WAGSAGEGIIVPPS--ADVIDASHRNGVPIL-GNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLE 163 (626)
T ss_dssp CGGGCSEEEE-CCCBTTTBSEECCC--HHHHHHHHHTTCCEE-EEEEECCGGGTCCHHHHHHHTCCCTTCCCHHHHHHHH
T ss_pred cccceeeeee-ecCCCccceeeCCC--cHHHHHHHHcCCEEE-EEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHH
Confidence 3368997643 4322 233322 457899999999886 32 45566645432 2799999
Q ss_pred HHHHcCCCEEEecCCcccCChhHH---HHHHHHHHHcC
Q 022982 109 DCKQVGFDTIELNVGSLEIPEETL---LRYVRLVKSAG 143 (289)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r---~~lI~~~~~~G 143 (289)
.|+.+|||.+=|+-=+-.++.+.. ..+++.+++.+
T Consensus 164 ~a~~yGFDGw~IN~E~~~~~~~~~~~l~~F~~~L~~~~ 201 (626)
T 2vtf_A 164 VADYYGFDGWFINQQTEGADEGTAEAMQAFLVYLQEQK 201 (626)
T ss_dssp HHHHHTCCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCceEEeeccccCCHHHHHHHHHHHHHHHHhC
Confidence 999999999888765534555544 44555555543
No 181
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=80.82 E-value=5.5 Score=37.10 Aligned_cols=134 Identities=16% Similarity=0.195 Sum_probs=67.8
Q ss_pred ccChhHHHHHHHHHHhCC-------cee--cCC--cHHHHHHHhCC--chHHHHHHHHHHcCCCEEEecCCcccCChhHH
Q 022982 66 LMPKPFIEEVVKRAHQHD-------VYV--STG--DWAEHLIRNGP--SAFKEYVEDCKQVGFDTIELNVGSLEIPEETL 132 (289)
Q Consensus 66 l~p~~~l~eKI~l~~~~g-------V~v--~~G--tlfE~a~~qg~--~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r 132 (289)
...++.++.-++.+++++ |.+ +++ .|-|. .+++ +.+.++-+.+++.|++.|-.|. .+
T Consensus 112 ~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l--~~~~~~e~V~~lA~~a~~~G~dGvV~s~------~E-- 181 (303)
T 3ru6_A 112 SAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSI--YRQKIEEAVINFSKISYENGLDGMVCSV------FE-- 181 (303)
T ss_dssp GGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHH--HSSCHHHHHHHHHHHHHHTTCSEEECCT------TT--
T ss_pred cCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHH--HcCCHHHHHHHHHHHHHHcCCCEEEECH------HH--
Confidence 445667777777777765 212 333 35443 2330 1233455677888988765532 22
Q ss_pred HHHHHHHHHcCCc-ccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecccccc
Q 022982 133 LRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCK 211 (289)
Q Consensus 133 ~~lI~~~~~~G~~-v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d 211 (289)
.+.||.....+|. |-|=++.+ .+. . +-+.++..+...++|||+++++ +|+||.
T Consensus 182 ~~~IR~~~~~~fl~VTPGIr~q--G~~---~--------------------~DQ~Rv~t~~~a~~aGAd~iVv-Gr~I~~ 235 (303)
T 3ru6_A 182 SKKIKEHTSSNFLTLTPGIRPF--GET---N--------------------DDQKRVANLAMARENLSDYIVV-GRPIYK 235 (303)
T ss_dssp HHHHHHHSCTTSEEEECCCCTT--C-------------------------------CCSHHHHHHTTCSEEEE-CHHHHT
T ss_pred HHHHHHhCCCccEEECCCcCcc--cCC---c--------------------ccccccCCHHHHHHcCCCEEEE-ChHHhC
Confidence 3466655544553 34433321 111 1 1233445666678999997655 799999
Q ss_pred CCCCccHHHHHHHHhccCCCceEEecC
Q 022982 212 HADSLRADIIAKVIGRLGLEKTMFEAT 238 (289)
Q Consensus 212 ~~G~~r~d~v~~ii~~l~~eklifEAP 238 (289)
+... ...+++|.+.+.- |=||++.
T Consensus 236 a~dp--~~a~~~i~~~i~~-~~~~~~~ 259 (303)
T 3ru6_A 236 NENP--RAVCEKILNKIHR-KNISEND 259 (303)
T ss_dssp SSCH--HHHHHHHHHHHC---------
T ss_pred CCCH--HHHHHHHHHHHHh-ccccccc
Confidence 8753 3455666655553 2334443
No 182
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=80.68 E-value=2.4 Score=39.50 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=77.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~ 171 (289)
+.+-.+...+.|..+|-|=|... -+|.++.++-|+.+++.-=..-++|-+- . .-|. +
T Consensus 97 v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~---A----RTDa-~---- 164 (302)
T 3fa4_A 97 VARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVI---A----RTDS-L---- 164 (302)
T ss_dssp HHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEE---E----EECC-H----
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEE---E----Eecc-c----
Confidence 44445666678999999988764 3677776666666655200001233331 1 1121 1
Q ss_pred ccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceE---EecCC-chhHHHHH
Q 022982 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM---FEATN-PRTSEWFI 247 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekli---fEAP~-k~qQ~~~I 247 (289)
+ ....++.|++++...+||||.|.+|+- -..+.+.+|.+.++.--++ .|-+. |..-..=+
T Consensus 165 ----~----~~gldeAi~Ra~ay~eAGAD~ifi~g~--------~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL 228 (302)
T 3fa4_A 165 ----Q----THGYEESVARLRAARDAGADVGFLEGI--------TSREMARQVIQDLAGWPLLLNMVEHGATPSISAAEA 228 (302)
T ss_dssp ----H----HHCHHHHHHHHHHHHTTTCSEEEETTC--------CCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHH
T ss_pred ----c----cCCHHHHHHHHHHHHHcCCCEEeecCC--------CCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHH
Confidence 0 124789999999999999999999983 1356788888877422222 34321 22223335
Q ss_pred HHhCCCcccccCCCCch
Q 022982 248 RRYGPKVNLFVDHSQVM 264 (289)
Q Consensus 248 ~~fG~~VNLgI~~~eVl 264 (289)
...| ||+-|=|...+
T Consensus 229 ~~lG--v~~v~~~~~~~ 243 (302)
T 3fa4_A 229 KEMG--FRIIIFPFAAL 243 (302)
T ss_dssp HHHT--CSEEEETTTTH
T ss_pred HHcC--CCEEEEchHHH
Confidence 6667 45653333333
No 183
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=80.65 E-value=24 Score=29.99 Aligned_cols=168 Identities=18% Similarity=0.222 Sum_probs=92.9
Q ss_pred CCCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccC----hhHHHHHHHHHHhC--Cceec--CC-cH-
Q 022982 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP----KPFIEEVVKRAHQH--DVYVS--TG-DW- 91 (289)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p----~~~l~eKI~l~~~~--gV~v~--~G-tl- 91 (289)
+..|+|.+++.|.. +...+.+++.+-.|=+ +..+.|.+.... ++.+++.-+++.++ .+.-. .| .+
T Consensus 29 ~~~Gv~~~v~~~~~----~~~~~~~~~l~~~~~~-~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiGld~~ 103 (259)
T 1zzm_A 29 AQAGVGKIIVPATE----AENFARVLALAENYQP-LYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLF 103 (259)
T ss_dssp HHTTEEEEEEECCS----GGGHHHHHHHHHHCTT-EEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEEEECC
T ss_pred HHcCCCEEEEecCC----HHHHHHHHHHHHhCCC-eEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 45799999988873 4566777777777766 667777654332 23455555566552 22111 01 11
Q ss_pred --HH-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccc
Q 022982 92 --AE-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFG 168 (289)
Q Consensus 92 --fE-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~ 168 (289)
.+ ...+.. .|...++.|+++|...+ |-.+. ..+ ++++.+++.+..+ - ++-...+ |
T Consensus 104 ~~~~~~~~q~~--~f~~~~~~a~~~~~Pv~-iH~~~---a~~---~~~~il~~~~~~~--~-~i~H~~~--g-------- 161 (259)
T 1zzm_A 104 GDDPQFERQQW--LLDEQLKLAKRYDLPVI-LHSRR---THD---KLAMHLKRHDLPR--T-GVVHGFS--G-------- 161 (259)
T ss_dssp SSCCCHHHHHH--HHHHHHHHHHHTTCCEE-EEEES---CHH---HHHHHHHHHCCTT--C-EEETTCC--S--------
T ss_pred CCCCCHHHHHH--HHHHHHHHHHHhCCcEE-EEecc---cHH---HHHHHHHhcCCCC--C-EEEEcCC--C--------
Confidence 00 122333 78899999999998865 33322 233 4555556654321 0 1111110 0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
+ .+.+++.++.|.+.-+ -+.-.|.+ ...+.++++.+|++||+||..-|
T Consensus 162 --------------~----~~~~~~~~~~g~~i~~-~g~~~~~~-----~~~~~~~~~~~~~dril~eTD~P 209 (259)
T 1zzm_A 162 --------------S----LQQAERFVQLGYKIGV-GGTITYPR-----ASKTRDVIAKLPLASLLLETDAP 209 (259)
T ss_dssp --------------C----HHHHHHHHHTTCEEEE-CGGGGCTT-----TCSHHHHHHHSCGGGEEECCCBT
T ss_pred --------------C----HHHHHHHHHCCCEEEE-Cceeeccc-----cHHHHHHHHhCCHHHEEEecCCC
Confidence 1 2456666778865543 12111222 23366778889999999998765
No 184
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=80.29 E-value=10 Score=35.88 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=60.0
Q ss_pred cChhHHHHHHHHHHhCC---ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe--cCCcccCChhHHHHHHHHHHH
Q 022982 67 MPKPFIEEVVKRAHQHD---VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL--NVGSLEIPEETLLRYVRLVKS 141 (289)
Q Consensus 67 ~p~~~l~eKI~l~~~~g---V~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI--SdGti~i~~~~r~~lI~~~~~ 141 (289)
++.+.+.+-|+..++++ |-...|+ . ....+.++.+.+.|.+.|+| +.| +.+...+.|+.+++
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~vg~-------~--~~~~~~~~~lieaGvd~I~idta~G----~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAAVGA-------A--PGNEERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRA 145 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEECCS-------C--TTCHHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCceeEEEEecc-------C--hhHHHHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHH
Confidence 45666888888888764 3222232 1 24677889999999999998 334 23456678888888
Q ss_pred c--CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 142 A--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 142 ~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
. +..|.. | + ..+ .+.+++..+||||.|.+
T Consensus 146 ~~p~v~Vi~--G--~---------------v~t---------------~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 146 AYPHLEIIG--G--N---------------VAT---------------AEGARALIEAGVSAVKV 176 (366)
T ss_dssp HCTTCEEEE--E--E---------------ECS---------------HHHHHHHHHHTCSEEEE
T ss_pred hcCCCceEe--e--e---------------eCC---------------HHHHHHHHHcCCCEEEE
Confidence 5 222211 1 0 001 46778888999999999
No 185
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=80.16 E-value=25 Score=29.99 Aligned_cols=169 Identities=15% Similarity=0.124 Sum_probs=92.4
Q ss_pred CCCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccC----hhHHHHHHHHHHhCCceecC--C-cHH--
Q 022982 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVST--G-DWA-- 92 (289)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~v~~--G-tlf-- 92 (289)
+..|++.++..+. .+...+.+++.+..|=++ ..+.|-+.... ++.+++.-+++.+..+.-.. | .+.
T Consensus 29 ~~~Gv~~~v~~~~----~~~~~~~~~~l~~~~~~i-~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~iGE~Gld~~~~ 103 (264)
T 1xwy_A 29 FDAGVNGLLITGT----NLRESQQAQKLARQYSSC-WSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRN 103 (264)
T ss_dssp HHTTCCEEEECCC----SHHHHHHHHHHHHHSTTE-EEEECCCGGGGGGCCHHHHHHHHHHHTSTTEEEEEEEEEETTTC
T ss_pred HHCCCCEEEEeCC----CHHHHHHHHHHHHhCCCE-EEEEEECCcccccCCHHHHHHHHHHhcCCCeEEEEEeccCCCCC
Confidence 4579999999887 566788888888887664 34555433222 23355555555433332110 2 110
Q ss_pred -H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceee-eecCCCCCCCcccccccc
Q 022982 93 -E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA-VMFNKSDIPSDRDRAFGA 169 (289)
Q Consensus 93 -E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g-~k~~~~evg~~~d~~~~~ 169 (289)
+ ...++. .|...++.|+++|...+==+.. ..+ ++++.+++.+.. ..+ +-...+ |
T Consensus 104 ~~~~~~q~~--~f~~~l~~a~~~~lpv~iH~~~----a~~---~~~~il~~~~~~---~~~~v~H~~~--g--------- 160 (264)
T 1xwy_A 104 FSTPEEQER--AFVAQLRIAADLNMPVFMHCRD----AHE---RFMTLLEPWLDK---LPGAVLHCFT--G--------- 160 (264)
T ss_dssp SSCHHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHGGGGGG---SSCEEECSCC--C---------
T ss_pred CCcHHHHHH--HHHHHHHHHHHhCCcEEEEcCC----chH---HHHHHHHhcCCC---CCcEEEEccC--C---------
Confidence 1 112222 5889999999999987633322 122 445555554321 111 111000 0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
+ .+.+++.++.|.+.=+ .|.... .-+.+.+.++++.+|++|||||..-|
T Consensus 161 -------------~----~~~~~~~~~~g~yi~~---~g~~~~--~~~~~~l~~~~~~~~~drll~eTD~P 209 (264)
T 1xwy_A 161 -------------T----REEMQACVAHGIYIGI---TGWVCD--ERRGLELRELLPLIPAEKLLIETDAP 209 (264)
T ss_dssp -------------C----HHHHHHHHHTTCEEEE---CGGGGC--TTTSHHHHHHGGGSCGGGEEECCCTT
T ss_pred -------------C----HHHHHHHHHCCeEEEE---CccccC--CcCcHHHHHHHHhCCHHHEEEecCCC
Confidence 1 2455666777754332 343220 01245677899999999999998765
No 186
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=80.00 E-value=13 Score=34.19 Aligned_cols=64 Identities=17% Similarity=0.281 Sum_probs=41.8
Q ss_pred HHHHHHHhhcccccEEEe---cCccccccChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 42 VLEDIFESMGQFVDGLKF---SGGSHSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKf---g~GTs~l~p~~~l~eKI~l~~~~gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
..-++|..|| ++-+|| ++ +-..+.++...+-|-++|+.+-| ||. +-+.|.+-++.|.+.|..-
T Consensus 172 tAiaml~dmG--~~SvKffPM~G----l~~leEl~avAkAca~~g~~lEPTGGI-------dl~Nf~~I~~i~l~aGv~~ 238 (275)
T 3m6y_A 172 TAIALVRDMG--GNSLKYFPMKG----LAHEEEYRAVAKACAEEGFALEPTGGI-------DKENFETIVRIALEANVEQ 238 (275)
T ss_dssp HHHHHHHHHT--CCEEEECCCTT----TTTHHHHHHHHHHHHHHTCEEEEBSSC-------CTTTHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHcC--CCeeeEeecCC----cccHHHHHHHHHHHHHcCceECCCCCc-------cHhHHHHHHHHHHHcCCCe
Confidence 3445555555 344554 43 44456788888888899996665 652 1237888888899988865
Q ss_pred E
Q 022982 118 I 118 (289)
Q Consensus 118 I 118 (289)
|
T Consensus 239 v 239 (275)
T 3m6y_A 239 V 239 (275)
T ss_dssp B
T ss_pred e
Confidence 4
No 187
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=79.94 E-value=1.3 Score=41.30 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=35.9
Q ss_pred HHHHHHHHHcCCCEEEecC----------------Ccc----cC-----ChhHHHHHHHHHHHcCCccccee
Q 022982 104 KEYVEDCKQVGFDTIELNV----------------GSL----EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd----------------Gti----~i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
++-.++++++||++|+||= |.- .| +.++..++|+.+.++|++|+-.+
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4555667899999999983 211 11 36799999999999999998665
No 188
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=79.84 E-value=20 Score=32.82 Aligned_cols=145 Identities=12% Similarity=0.050 Sum_probs=98.7
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcCC-cccceeeeecCCCCCCCccccccccccccCC
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAGL-KAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~-~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
.+.+.++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+.-= ++.-=+|+ |
T Consensus 27 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv-------g--------------- 84 (311)
T 3h5d_A 27 FDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV-------G--------------- 84 (311)
T ss_dssp TTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC-------C---------------
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------C---------------
Confidence 35789999999999999998865543 7999999999999988410 11111122 1
Q ss_pred CCccccccHHHHHHHHHHHHHccC-cEEEEecc-------------------------ccccC----CCCccHHHHHHHH
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGA-DMIMIDSD-------------------------DVCKH----ADSLRADIIAKVI 225 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA-~~ViiEar-------------------------GI~d~----~G~~r~d~v~~ii 225 (289)
..+..+.|++++..-++|| |.|++=.- -||+. .-++..+.+.++.
T Consensus 85 -----~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (311)
T 3h5d_A 85 -----TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLA 159 (311)
T ss_dssp -----CSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred -----CcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 1147788999999999997 99988662 15653 2367788888887
Q ss_pred hccCCCce--EEecCCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 226 GRLGLEKT--MFEATNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 226 ~~l~~ekl--ifEAP~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
+ . .+| |=|+.+-.+...+++..++++.+.--. |-+-+++|..|--|
T Consensus 160 ~-~--pnIvgiKdssd~~~~~~~~~~~~~~f~v~~G~-d~~~l~~l~~Ga~G 207 (311)
T 3h5d_A 160 D-H--PNIIGVKECTSLANMAYLIEHKPEEFLIYTGE-DGDAFHAMNLGADG 207 (311)
T ss_dssp T-S--TTEEEEEECSCHHHHHHHHHHCCSSCEEEECC-GGGHHHHHHHTCCE
T ss_pred c-C--CCEEEEEeCCCHHHHHHHHHHcCCCEEEEECc-HHHHHHHHHcCCCE
Confidence 4 3 344 234546666777788888776665333 44567888866444
No 189
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=79.78 E-value=6 Score=35.18 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
...+..+.|.+-|+++||| ++....-.+.|+.+++. + ...-+|. |..++
T Consensus 26 ~a~~~a~al~~gGi~~iEv-----t~~t~~a~~~I~~l~~~-~-p~~~IGA---------------GTVlt--------- 74 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEV-----TLRTEAGLAAISAIKKA-V-PEAIVGA---------------GTVCT--------- 74 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEE-----ETTSTTHHHHHHHHHHH-C-TTSEEEE---------------ECCCS---------
T ss_pred HHHHHHHHHHHcCCCEEEE-----eCCCccHHHHHHHHHHH-C-CCCeEee---------------ccccC---------
Confidence 4555667778889999999 34445667899998883 1 0112222 11122
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEec
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
.++++..++|||++|+.=+
T Consensus 75 ------~~~a~~ai~AGA~fivsP~ 93 (217)
T 3lab_A 75 ------ADDFQKAIDAGAQFIVSPG 93 (217)
T ss_dssp ------HHHHHHHHHHTCSEEEESS
T ss_pred ------HHHHHHHHHcCCCEEEeCC
Confidence 6889999999999998755
No 190
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=79.75 E-value=11 Score=33.87 Aligned_cols=101 Identities=15% Similarity=0.131 Sum_probs=68.6
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC-CceecCCc----HHHHHHHh--CC----------chHH
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFK 104 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~Gt----lfE~a~~q--g~----------~~~~ 104 (289)
..+.+++.-+++|| +|+|...+.+++.+++.+...++. +++++--| -+|.|+.. |. +.++
T Consensus 30 ~a~~~v~~GAdiID---Ig~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~d~~~ 106 (262)
T 1f6y_A 30 WARRQEEGGARALD---LNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNAEREKVE 106 (262)
T ss_dssp HHHHHHHHTCSEEE---EBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECSCHHHHH
T ss_pred HHHHHHHCCCcEEE---ECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCCCcccHH
Confidence 34555665555555 588988899999999999999987 88888765 48888876 53 2244
Q ss_pred HHHHHHHHcCCCEEEecCCcccCC--hhHH----HHHHHHHHHcCCc
Q 022982 105 EYVEDCKQVGFDTIELNVGSLEIP--EETL----LRYVRLVKSAGLK 145 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~--~~~r----~~lI~~~~~~G~~ 145 (289)
+.++.++++|...|=....--.+| .+++ .+.++++.+.|+.
T Consensus 107 ~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 107 KLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp HHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 789999999998888764211122 2333 5677888887774
No 191
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=79.67 E-value=5.5 Score=37.87 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELN--VGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS--dGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
...++++.+.+.|+|.|+|. .|. + +.-.+.|+.+++. +..|. .++- .
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~---~-~~~~e~I~~ir~~~~~~~Vi----~G~V---------------~------ 150 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAH---A-KYVGKTLKSLRQLLGSRCIM----AGNV---------------A------ 150 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCS---S-HHHHHHHHHHHHHHTTCEEE----EEEE---------------C------
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC---c-HhHHHHHHHHHHhcCCCeEE----EcCc---------------C------
Confidence 46678899999999999994 553 2 2334678888775 33322 2110 0
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
| .+.++...++|||.|.+
T Consensus 151 -----T----~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 151 -----T----YAGADYLASCGADIIKA 168 (361)
T ss_dssp -----S----HHHHHHHHHTTCSEEEE
T ss_pred -----C----HHHHHHHHHcCCCEEEE
Confidence 1 45678888999999999
No 192
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=79.61 E-value=9.9 Score=41.22 Aligned_cols=102 Identities=19% Similarity=0.144 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
..+++++.+.+.|.+.|-|.+..-+ .+.....|+.+++.|..| ++.+.... .+ .| |++ +.
T Consensus 646 ~~~~~i~~a~~~g~d~irif~sl~~--~~~~~~~i~~~~~~g~~v--~~~i~~~~-~~---~d--------~~r----~~ 705 (1165)
T 2qf7_A 646 VVKYFVRQAAKGGIDLFRVFDCLNW--VENMRVSMDAIAEENKLC--EAAICYTG-DI---LN--------SAR----PK 705 (1165)
T ss_dssp HHHHHHHHHHHHTCCEEEEECTTCC--GGGGHHHHHHHHHTTCEE--EEEEECCS-CT---TC--------TTS----GG
T ss_pred hHHHHHHHHHhcCcCEEEEEeeHHH--HHHHHHHHHHHHhccceE--EEEEEEec-cc---cC--------CCC----CC
Confidence 3678999999999999999765433 345667899999999665 44443211 01 12 111 11
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
-|++.+++.+++..++||+.| .|+|..|-..+..+.++++.+
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i-----~l~DT~G~~~P~~~~~lv~~l 747 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHII-----AVKDMAGLLKPAAAKVLFKAL 747 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEE-----EEeCccCCcCHHHHHHHHHHH
Confidence 268999999999999999966 478899999988888877643
No 193
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=79.57 E-value=2.2 Score=40.03 Aligned_cols=107 Identities=23% Similarity=0.319 Sum_probs=59.5
Q ss_pred ChhHHHHHHHHHHhC---C----ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHH
Q 022982 68 PKPFIEEVVKRAHQH---D----VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRY 135 (289)
Q Consensus 68 p~~~l~eKI~l~~~~---g----V~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~l 135 (289)
....+.|.|+-.++. + |++++.+|.+--+ ..+...++.+.+.+. .|+|+||.|... .++....++
T Consensus 192 R~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~--~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~ 268 (343)
T 3kru_A 192 RARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGI--NIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKY 268 (343)
T ss_dssp HTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSC--CHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCc--cHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehH
Confidence 335677888887765 3 3556645543100 011334455666667 999999877532 233334566
Q ss_pred HHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEeccccc
Q 022982 136 VRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVC 210 (289)
Q Consensus 136 I~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEarGI~ 210 (289)
++.+++. +. +|=++. | .+. | .+.+++.|++| ||.|++ +|++.
T Consensus 269 ~~~ir~~-~~-iPVi~~-------G--------gi~-----------t----~e~Ae~~l~~G~aD~V~i-GR~~l 311 (343)
T 3kru_A 269 AETIKKR-CN-IKTSAV-------G--------LIT-----------T----QELAEEILSNERADLVAL-GRELL 311 (343)
T ss_dssp HHHHHHH-HT-CEEEEE-------S--------SCC-----------C----HHHHHHHHHTTSCSEEEE-SHHHH
T ss_pred HHHHHHh-cC-ccccee-------e--------eee-----------H----HHHHHHHHhchhhHHHHH-HHHHh
Confidence 6776663 00 121222 1 111 1 36777888998 999988 56543
No 194
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=79.54 E-value=7.1 Score=35.53 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=17.6
Q ss_pred HHHHHHHHccCcEEEEecc-cccc-CCCCccHHHHHHHHh
Q 022982 189 RRAERCLEAGADMIMIDSD-DVCK-HADSLRADIIAKVIG 226 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEar-GI~d-~~G~~r~d~v~~ii~ 226 (289)
+-.+-+|+||+.+||=-== -|.| ..|+-|.+.+.++++
T Consensus 203 ~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~ 242 (249)
T 3m0z_A 203 EILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLE 242 (249)
T ss_dssp HHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHH
Confidence 3444455555555542211 2332 245555555555553
No 195
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=79.34 E-value=3.6 Score=38.39 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=72.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~ 171 (289)
+-+-.+...+.|..+|-|=|... -+|.++.++-|+.+++.-=..-+.|-+.- .-|. + .
T Consensus 105 v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~A-------RTDa-~---~ 173 (307)
T 3lye_A 105 VARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIA-------RTDA-L---Q 173 (307)
T ss_dssp HHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEE-------EECC-H---H
T ss_pred HHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEE-------echh-h---h
Confidence 34445666778999999999864 35777755555444432000002333310 1121 1 0
Q ss_pred ccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCce---EEecC-CchhHHHHH
Q 022982 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT---MFEAT-NPRTSEWFI 247 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekl---ifEAP-~k~qQ~~~I 247 (289)
....++.|++++...+||||.|.+|+- -..+.+.+|.+.++.-.+ |.|-+ .|..-..=+
T Consensus 174 ---------~~gldeAi~Ra~ay~eAGAD~ifi~~~--------~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL 236 (307)
T 3lye_A 174 ---------SLGYEECIERLRAARDEGADVGLLEGF--------RSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEA 236 (307)
T ss_dssp ---------HHCHHHHHHHHHHHHHTTCSEEEECCC--------SCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHH
T ss_pred ---------ccCHHHHHHHHHHHHHCCCCEEEecCC--------CCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHH
Confidence 124789999999999999999999963 135778888877752122 34532 122223335
Q ss_pred HHhCCCcccc
Q 022982 248 RRYGPKVNLF 257 (289)
Q Consensus 248 ~~fG~~VNLg 257 (289)
...|- |+-
T Consensus 237 ~~lGv--~~v 244 (307)
T 3lye_A 237 KAMGF--RIM 244 (307)
T ss_dssp HHHTC--SEE
T ss_pred HHcCC--eEE
Confidence 66674 554
No 196
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=79.25 E-value=11 Score=35.72 Aligned_cols=101 Identities=11% Similarity=-0.029 Sum_probs=66.2
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeec
Q 022982 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMF 154 (289)
Q Consensus 79 ~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~ 154 (289)
.+-.||.+..=|.|-.--.=+.+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=.|+
T Consensus 58 ~~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv-- 135 (360)
T 4dpp_A 58 IKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT-- 135 (360)
T ss_dssp HHTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--
T ss_pred cccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec--
Confidence 3556775554443310001122368888999999999999884433 489999999999998873 1011101122
Q ss_pred CCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 155 NKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 155 ~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
| ..+..+.|++++..-++|||.|++=.
T Consensus 136 -----g--------------------~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 136 -----G--------------------SNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp -----C--------------------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -----C--------------------CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 11478889999999999999999865
No 197
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=78.87 E-value=5.5 Score=37.74 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC--------Chh----HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEI--------PEE----TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i--------~~~----~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~ 169 (289)
-++.-++.++..|.+.|-|...+-++ +.+ .-.+.|+.+++.|..| +|+-.+.
T Consensus 88 di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v--~~~~ed~-------------- 151 (370)
T 3rmj_A 88 DIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV--EFSCEDA-------------- 151 (370)
T ss_dssp HHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCE--EEEEETG--------------
T ss_pred HHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEE--EEecCCC--------------
Confidence 46666666677999998887655433 222 2334677888888764 4444221
Q ss_pred ccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 170 YVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
+..|++.+++.+++..++||+.|- |+|..|-..+..+.++++
T Consensus 152 ----------~r~~~~~~~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~ 193 (370)
T 3rmj_A 152 ----------LRSEIDFLAEICGAVIEAGATTIN-----IPDTVGYSIPYKTEEFFR 193 (370)
T ss_dssp ----------GGSCHHHHHHHHHHHHHHTCCEEE-----EECSSSCCCHHHHHHHHH
T ss_pred ----------CccCHHHHHHHHHHHHHcCCCEEE-----ecCccCCcCHHHHHHHHH
Confidence 012689999999999999998764 788888888877776664
No 198
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=78.83 E-value=8.8 Score=33.00 Aligned_cols=95 Identities=20% Similarity=0.227 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
...++.+.+.+.|.++|.++|..-. .....-.++++.+++. .. .| +-+.. .+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~-iP-vi~~G--------------gi---------- 84 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VF-IP-LTVGG--------------GV---------- 84 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CC-SC-EEEES--------------SC----------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-CC-CC-EEEEC--------------Cc----------
Confidence 4667778888999999999976533 2344456778887763 10 11 11110 11
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceE
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekli 234 (289)
.+ .++++..+++|||.|++=..-+.+ .+.+.++.+.++.++++
T Consensus 85 -~~----~~~~~~~~~~Gad~V~lg~~~l~~------p~~~~~~~~~~~~~~i~ 127 (252)
T 1ka9_F 85 -RS----LEDARKLLLSGADKVSVNSAAVRR------PELIRELADHFGAQAVV 127 (252)
T ss_dssp -CS----HHHHHHHHHHTCSEEEECHHHHHC------THHHHHHHHHHCGGGEE
T ss_pred -CC----HHHHHHHHHcCCCEEEEChHHHhC------cHHHHHHHHHcCCCcEE
Confidence 11 367888889999999995543322 35677787777766543
No 199
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=78.72 E-value=18 Score=32.80 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=56.1
Q ss_pred hHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecC-C--cHHHHHHHh--CCch---HHHHHHHHHH
Q 022982 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWAEHLIRN--GPSA---FKEYVEDCKQ 112 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-G--tlfE~a~~q--g~~~---~~~yl~~~k~ 112 (289)
..+.++++..-+..+ +.+. +.+...-++.++.++++|+..++ | ++-+..+.+ .... .-+-++.+++
T Consensus 126 ~~~~~l~~~ik~~~~-i~i~-----~s~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~ 199 (350)
T 3t7v_A 126 NRFVELVQIVKEELG-LPIM-----ISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQ 199 (350)
T ss_dssp HHHHHHHHHHHHHHC-SCEE-----EECSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcC-ceEE-----EeCCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 455666665543222 2221 12222456788899999995444 4 443333322 1123 4455677888
Q ss_pred cCCCEEEecCCcc---cCChhHHHHHHHHHHHcCCc
Q 022982 113 VGFDTIELNVGSL---EIPEETLLRYVRLVKSAGLK 145 (289)
Q Consensus 113 lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~~ 145 (289)
.|+. ++.+.+ .=+.+++.+.++.+++.+..
T Consensus 200 ~Gi~---v~~~~i~Glget~e~~~~~l~~l~~l~~~ 232 (350)
T 3t7v_A 200 QGYC---VEDGILTGVGNDIESTILSLRGMSTNDPD 232 (350)
T ss_dssp HTCE---EEEEEEESSSCCHHHHHHHHHHHHHTCCS
T ss_pred cCCe---EccceEeecCCCHHHHHHHHHHHHhCCCC
Confidence 9985 333332 45778999999999998754
No 200
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=78.69 E-value=15 Score=33.44 Aligned_cols=81 Identities=19% Similarity=0.221 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHc--CCCEEEecCCcccCC-------hhHHHHHHHHHHHc--------CCcccceeeeecCCCCCCCccc
Q 022982 102 AFKEYVEDCKQV--GFDTIELNVGSLEIP-------EETLLRYVRLVKSA--------GLKAKPKFAVMFNKSDIPSDRD 164 (289)
Q Consensus 102 ~~~~yl~~~k~l--GF~~IEISdGti~i~-------~~~r~~lI~~~~~~--------G~~v~~E~g~k~~~~evg~~~d 164 (289)
..++|.+.++.+ |||+|||+-++-..+ .+.-.++|+.+++. |- -+| +.+|-..
T Consensus 151 ~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~-~~P-v~vKi~~-------- 220 (336)
T 1f76_A 151 GKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHK-YVP-IAVKIAP-------- 220 (336)
T ss_dssp THHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTS-CCC-EEEECCS--------
T ss_pred cHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccc-cCc-eEEEecC--------
Confidence 366776666533 699999986543322 22224566666553 10 012 5555310
Q ss_pred cccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc
Q 022982 165 RAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD 208 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG 208 (289)
.| +.++.++.++...++|+|.|++-.+.
T Consensus 221 ----------~~------~~~~~~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 221 ----------DL------SEEELIQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp ----------CC------CHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred ----------CC------CHHHHHHHHHHHHHcCCcEEEEeCCc
Confidence 02 35677888999999999999998764
No 201
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=78.24 E-value=6 Score=33.47 Aligned_cols=42 Identities=19% Similarity=0.104 Sum_probs=29.9
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccC-ChhHHHHHHHHHHHc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSLEI-PEETLLRYVRLVKSA 142 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i-~~~~r~~lI~~~~~~ 142 (289)
+...+..+.+.+.|+++|++++-...- ....-.++|+.+++.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~ 75 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA 75 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh
Confidence 467888999999999999999644332 222346677777763
No 202
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=78.23 E-value=15 Score=39.70 Aligned_cols=102 Identities=14% Similarity=0.234 Sum_probs=70.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
++++++.+.+.|.|.|-|.+..-++... ..+++.+++.|..+. ..+..-...+++.+. ..-
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~sd~~~~--~~~~~~~~e~g~~~~--~~i~~~~~~~~pe~~---------------~~~ 689 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLNWVDQM--KVANEAVQEAGKISE--GTICYTGDILNPERS---------------NIY 689 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCGGGG--HHHHHHHHHTTCEEE--EEEECCSCTTCTTTC---------------SSS
T ss_pred HHHHHHHHHhCCcCEEEEEeeCCHHHHH--HHHHHHHHHHhhhee--EEEeecccccChhhc---------------CCC
Confidence 5778889999999999998877766443 468888888885543 222211111211110 012
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
|++.+++.+++-.++||+.| .|.|..|-.....+.++++.+
T Consensus 690 ~~~~~~~~a~~~~~~Ga~~i-----~l~Dt~G~~~P~~~~~lv~~l 730 (1150)
T 3hbl_A 690 TLEYYVKLAKELEREGFHIL-----AIKDMAGLLKPKAAYELIGEL 730 (1150)
T ss_dssp SHHHHHHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCee-----eEcCccCCCCHHHHHHHHHHH
Confidence 68999999999999999865 478888888888887777543
No 203
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=78.19 E-value=11 Score=36.07 Aligned_cols=152 Identities=19% Similarity=0.237 Sum_probs=94.2
Q ss_pred CceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHcCCcccceeeeecCCC
Q 022982 83 DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAVMFNKS 157 (289)
Q Consensus 83 gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~ 157 (289)
||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||+|...+..+. ..
T Consensus 6 GiSvY~~~~~~~--------~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~-l~ 76 (372)
T 2p0o_A 6 GISVFLGEEITN--------DTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEA-LK 76 (372)
T ss_dssp EEECCTTSCCCH--------HHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHH-HH
T ss_pred EEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHH-HH
Confidence 5667776 3333 3458999999999999866543222 1234456788999999999888776533 11
Q ss_pred CCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc-------------ccccCCCCccHHHHHHH
Q 022982 158 DIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD-------------DVCKHADSLRADIIAKV 224 (289)
Q Consensus 158 evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------GI~d~~G~~r~d~v~~i 224 (289)
..|..- +..+..-+.|++-+-+.-- -|.=+.-.+.++.++.|
T Consensus 77 ~Lg~s~-------------------------~dl~~~~~lGi~glRLD~Gf~~~eia~ls~nlkIeLNASti~~~~l~~l 131 (372)
T 2p0o_A 77 RAGFSF-------------------------DELEPLIELGVTGLRMDYGITIEQMAHASHKIDIGLNASTITLEEVAEL 131 (372)
T ss_dssp TTTCBT-------------------------TBCHHHHHHTCCEEEECSSCCHHHHHHHHTTSEEEEETTTCCHHHHHHH
T ss_pred HcCCCH-------------------------HHHHHHHHcCCCEEEEcCCCCHHHHHHHhcCCEEEEECccCCHHHHHHH
Confidence 222110 0111233557777777652 24444556688889999
Q ss_pred Hhc-cCCCceEEec-----CCch---------hHHHHHHHhCCCcccccCCCC---------chhhhhhh
Q 022982 225 IGR-LGLEKTMFEA-----TNPR---------TSEWFIRRYGPKVNLFVDHSQ---------VMDLECLR 270 (289)
Q Consensus 225 i~~-l~~eklifEA-----P~k~---------qQ~~~I~~fG~~VNLgI~~~e---------Vl~LE~LR 270 (289)
++. ...++| +| |+|. ++...+++||-+|=-||+-+. +.-||.-|
T Consensus 132 ~~~~~n~~~l--~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~rGPl~eGLPTLE~HR 199 (372)
T 2p0o_A 132 KAHQADFSRL--EAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQTRGPIFAGLPTLEKHR 199 (372)
T ss_dssp HHTTCCGGGE--EEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSSCCTTTCSCCCSBGGGT
T ss_pred HHcCCChHHe--EEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCccCCCccCCCCchHHhC
Confidence 853 336665 33 4443 378888999977776688754 45566666
No 204
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=77.87 E-value=4.8 Score=37.73 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=63.7
Q ss_pred HHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccc
Q 022982 105 EYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~ 173 (289)
+-.+..-+.|..+|-|=|+.. -+|.++.++-|+.+++..-. +.|-++- ..|..
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~--~~~~I~A-------Rtda~------- 183 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD--SDFFLVA-------RTDAR------- 183 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT--SCCEEEE-------EECTH-------
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhccc--CCcEEEE-------eeHHh-------
Confidence 334444458999999999862 36777777777777665311 3333321 11210
Q ss_pred CCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCC
Q 022982 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 174 ~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ 230 (289)
.....++.|++++...+||||.|.+|+- ...+++.+|.+.++.
T Consensus 184 ------a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~--------~~~e~~~~i~~~l~~ 226 (318)
T 1zlp_A 184 ------APHGLEEGIRRANLYKEAGADATFVEAP--------ANVDELKEVSAKTKG 226 (318)
T ss_dssp ------HHHHHHHHHHHHHHHHHTTCSEEEECCC--------CSHHHHHHHHHHSCS
T ss_pred ------hhcCHHHHHHHHHHHHHcCCCEEEEcCC--------CCHHHHHHHHHhcCC
Confidence 0113589999999999999999999973 135788888888873
No 205
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=77.83 E-value=2 Score=38.33 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=46.9
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCcc-------cC--ChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccc
Q 022982 102 AFKEYVEDCKQ-VGFDTIELNVGSL-------EI--PEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (289)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGti-------~i--~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~ 170 (289)
.+.+..+.+.+ .|||.|||.=++- .+ +.+...++|+.+++. ++. +.+|-.. .
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~p----v~vk~~~-~------------ 174 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVP----LYVKLSP-N------------ 174 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSC----EEEEECS-C------------
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCC----EEEEECC-C------------
Confidence 56666677777 8999999975432 11 444557888888886 432 3444310 0
Q ss_pred cccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
+ .++ .+.++...++||+.|++-.
T Consensus 175 -----~-----~~~---~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 175 -----V-----TDI---VPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp -----S-----SCS---HHHHHHHHHTTCSEEEECC
T ss_pred -----h-----HHH---HHHHHHHHHcCCCEEEEeC
Confidence 0 012 3456667799999999944
No 206
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=77.68 E-value=19 Score=32.05 Aligned_cols=164 Identities=11% Similarity=0.111 Sum_probs=99.0
Q ss_pred CCCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccCh---hHHHHHHHHHHhCCceec-CC-cHH----
Q 022982 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVS-TG-DWA---- 92 (289)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~---~~l~eKI~l~~~~gV~v~-~G-tlf---- 92 (289)
+..|+..|. .|. .+...+..++.+..| +.+..+.|-+.-+.. +.+.+..+++.+. |-+- .| .+.
T Consensus 24 ~~~gV~~i~-v~~----~~~~~~~~~~la~~~-~~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~-vaIGEiGLD~~~~~~ 96 (254)
T 3gg7_A 24 EERQLTVLS-VTT----TPAAWRGTLALAAGR-PHVWTALGFHPEVVSERAADLPWFDRYLPET-RFVGEVGLDGSPSLR 96 (254)
T ss_dssp HHTTCEEEE-CCS----SGGGHHHHHGGGTTC-TTEEECBCCCGGGTTTTGGGTHHHHHHGGGC-SEEEEEECCCCGGGG
T ss_pred HHCCCcEEE-ecC----CHHHHHHHHHHHHhC-CCeEEEEeeCcccccccHHHHHHHHHHhhhc-cEEEEEecCCCcccC
Confidence 356888776 366 667999999999998 457788887664431 3455555565432 2221 13 111
Q ss_pred H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022982 93 E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (289)
Q Consensus 93 E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~ 171 (289)
. ...++. .|.+.++.|+++|...|-|=..- ..+ ++++.+++.+.. --++-...+ ++
T Consensus 97 ~~~~~Q~~--~F~~ql~lA~e~~lPviSiH~r~---a~~---~~~~il~~~~~~---~~~v~H~fs-----G~------- 153 (254)
T 3gg7_A 97 GTWTQQFA--VFQHILRRCEDHGGRILSIHSRR---AES---EVLNCLEANPRS---GTPILHWYS-----GS------- 153 (254)
T ss_dssp GGHHHHHH--HHHHHHHHHHHTTCEEEEEECTT---CHH---HHHHHHHHCGGG---EEEEEETCC-----SC-------
T ss_pred CCHHHHHH--HHHHHHHHHHHcCCCEEEEEcCC---cHH---HHHHHHHHcCCC---CcEEEEeCC-----CC-------
Confidence 1 223444 79999999999999987332221 223 456666664211 111211111 11
Q ss_pred ccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc-cccCCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 172 ARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD-VCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG-I~d~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
.+++++.++.|.+.=+- | ++ +.+.+.++++.+|++||++|..-|
T Consensus 154 ----------------~e~a~~~l~~G~yis~~---g~~~------~~~~~~~~v~~ip~drlLlETD~P 198 (254)
T 3gg7_A 154 ----------------VTELRRAISLGCWFSVG---PTMV------RTQKGAALIRSMPRDRVLTETDGP 198 (254)
T ss_dssp ----------------HHHHHHHHHTTCEEEEC---HHHH------TSHHHHHHHHHSCGGGEEECCCTT
T ss_pred ----------------HHHHHHHHcCCcEEEEC---cccC------chHHHHHHHHHcCCCeEEEeCCCC
Confidence 46777788888655221 2 23 345678899999999999998766
No 207
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=77.65 E-value=4.1 Score=36.14 Aligned_cols=146 Identities=14% Similarity=0.158 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CCh----hHHHHHHHHHHHcCCcccceeee--ecCCCCCCCcccccccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPE----ETLLRYVRLVKSAGLKAKPKFAV--MFNKSDIPSDRDRAFGAYVAR 173 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~~----~~r~~lI~~~~~~G~~v~~E~g~--k~~~~evg~~~d~~~~~~~~~ 173 (289)
..+..++.++++||++||+...... .|. ++..++-+.+++.|+++..-... ........ ..|++
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~-~~d~~------- 107 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFL-APTLE------- 107 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTT-CSSHH-------
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCC-CCCHH-------
Confidence 4566678889999999999876543 122 25667778889999987542111 00000000 01110
Q ss_pred CCCCccccccHHHHHHHHHHHHHccCcEEEEeccc----cccCCCCccH-------HH---HHHHHhccCCCceEEec--
Q 022982 174 APRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD----VCKHADSLRA-------DI---IAKVIGRLGLEKTMFEA-- 237 (289)
Q Consensus 174 ~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG----I~d~~G~~r~-------d~---v~~ii~~l~~eklifEA-- 237 (289)
.+ ....+.+.+.++..-+.||..|++-.-+ .+... .-+. +- +.+.++..|+..|.+|.
T Consensus 108 -~r----~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~ 181 (316)
T 3qxb_A 108 -LQ----SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNP-ARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVP 181 (316)
T ss_dssp -HH----HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCH-HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred -HH----HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCc-ccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecC
Confidence 00 1124455566666667899999865322 11110 0011 11 22333455664488997
Q ss_pred C------CchhHHHHHHHh---C-CCcccccCCC
Q 022982 238 T------NPRTSEWFIRRY---G-PKVNLFVDHS 261 (289)
Q Consensus 238 P------~k~qQ~~~I~~f---G-~~VNLgI~~~ 261 (289)
. ...+-..+++.+ + |+|-+-+|..
T Consensus 182 ~~~~~~~t~~~~~~l~~~v~~~~~~~vg~~lD~~ 215 (316)
T 3qxb_A 182 LATEFPSSAADAARLMADLDGRTEIPVRLLVDWG 215 (316)
T ss_dssp CTTBSSCSHHHHHHHHHHHTTTSSSCEEEEEEHH
T ss_pred CccccCCCHHHHHHHHHHHhccCCCCEEEEEEcc
Confidence 2 345567899998 6 4555534443
No 208
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=77.57 E-value=22 Score=34.51 Aligned_cols=114 Identities=20% Similarity=0.296 Sum_probs=67.6
Q ss_pred HHHHHHHhhcccccEEEe--cCccccccChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 42 VLEDIFESMGQFVDGLKF--SGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKf--g~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
..+.+++ +| +|.+=+ +.|. + +...+.|+.++++ ++++..|+- . . .+..+.+.+.|.|+
T Consensus 259 ~a~~~~~-aG--~d~v~i~~~~G~----~-~~~~~~i~~i~~~~~~~pvi~~~v------~---t-~~~a~~l~~aGad~ 320 (514)
T 1jcn_A 259 RLDLLTQ-AG--VDVIVLDSSQGN----S-VYQIAMVHYIKQKYPHLQVIGGNV------V---T-AAQAKNLIDAGVDG 320 (514)
T ss_dssp HHHHHHH-TT--CSEEEECCSCCC----S-HHHHHHHHHHHHHCTTCEEEEEEE------C---S-HHHHHHHHHHTCSE
T ss_pred HHHHHHH-cC--CCEEEeeccCCc----c-hhHHHHHHHHHHhCCCCceEeccc------c---h-HHHHHHHHHcCCCE
Confidence 3344444 44 677776 4332 3 3456777777777 888876532 1 1 23356778899999
Q ss_pred EEecC--Ccc---------cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHH
Q 022982 118 IELNV--GSL---------EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVD 185 (289)
Q Consensus 118 IEISd--Gti---------~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~ 185 (289)
|-++. |.+ ..|...-..+++.+++. +..|+.-=|+ .+
T Consensus 321 I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI-----------------------------~~-- 369 (514)
T 1jcn_A 321 LRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGI-----------------------------QT-- 369 (514)
T ss_dssp EEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCC-----------------------------CS--
T ss_pred EEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCC-----------------------------CC--
Confidence 99976 332 34455556667766653 2222222222 11
Q ss_pred HHHHHHHHHHHccCcEEEEec
Q 022982 186 LLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 186 ~~I~~~~~dLeAGA~~ViiEa 206 (289)
.+.+.+.|++||+.|++=.
T Consensus 370 --~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 370 --VGHVVKALALGASTVMMGS 388 (514)
T ss_dssp --HHHHHHHHHTTCSEEEEST
T ss_pred --HHHHHHHHHcCCCeeeECH
Confidence 2455667889999999965
No 209
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=77.07 E-value=15 Score=33.33 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=70.3
Q ss_pred chhHHHHHHHhhcccc----------cEEEecCcccc-ccChh--HHHHHHHHHHhCCc---eecC-CcHHHHHHHhCCc
Q 022982 39 SHNVLEDIFESMGQFV----------DGLKFSGGSHS-LMPKP--FIEEVVKRAHQHDV---YVST-GDWAEHLIRNGPS 101 (289)
Q Consensus 39 g~~~~~DlLe~ag~yI----------D~lKfg~GTs~-l~p~~--~l~eKI~l~~~~gV---~v~~-GtlfE~a~~qg~~ 101 (289)
|..+.+.+|...-.+| -++|++.|-.+ -.+.. -++.-|+++++-|+ ++|| ||+-- -+
T Consensus 101 gag~t~~~L~~~~T~VNaLvsPTG~~G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffPm~Gl~~------l~ 174 (249)
T 3m0z_A 101 GVATSRALLGQNETVVNGLVSPTGTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMGGLKH------RA 174 (249)
T ss_dssp GHHHHHHHHTSSCSEEEEEEBCCSSTTEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECCCTTTTT------HH
T ss_pred chHHHHHhccCCCeEEEEEEcCCCccceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEeecCCccc------HH
Confidence 5556666666544454 46899999321 11111 27889999999997 8888 65310 01
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-ccceee
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFA 151 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~g 151 (289)
.+...-+.|.+-|| ++|=.-| |+.+...++++.+.++|-+ +.|.+-
T Consensus 175 E~~avAka~a~~g~-~lEPTGG---Idl~N~~~I~~i~l~aGv~~viPHIY 221 (249)
T 3m0z_A 175 EFEAVAKACAAHDF-WLEPTGG---IDLENYSEILKIALDAGVSKIIPHIY 221 (249)
T ss_dssp HHHHHHHHHHHTTC-EEEEBSS---CCTTTHHHHHHHHHHHTCSCBCCBCC
T ss_pred HHHHHHHHHHHcCc-eECCCCC---ccHhhHHHHHHHHHHcCCCeeccccc
Confidence 34444578999999 9998665 5666677899999999986 778763
No 210
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=76.95 E-value=12 Score=34.25 Aligned_cols=135 Identities=13% Similarity=0.101 Sum_probs=84.6
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcc
Q 022982 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDR 163 (289)
Q Consensus 97 ~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~-------------~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~ 163 (289)
.+|-..+.+-+++|.+.||+.+|||..++.+- .++..++-+.+++.|+.+..--.. .-..++ .
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py---~iNL~S-~ 132 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQ---YVNPGS-P 132 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCT---TCCTTC-S
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCch---hhcCCC-C
Confidence 44444788899999999999999988876553 256667777888889875331111 001111 1
Q ss_pred ccccccccccCCCCccccccHHHHHHHHHHHHHccCc--EEEEeccccccCCCCccHHHHHHHHhccCC-----CceEEe
Q 022982 164 DRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD--MIMIDSDDVCKHADSLRADIIAKVIGRLGL-----EKTMFE 236 (289)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~--~ViiEarGI~d~~G~~r~d~v~~ii~~l~~-----eklifE 236 (289)
|++ .+ ..+++.+.+.++++-+.|+. .|++=.-+.|. . +++.++.+++.+.. ++|..|
T Consensus 133 ~~e--------~r----e~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~~---~-~e~~~~r~~e~l~~~~~a~~~l~lE 196 (301)
T 2j6v_A 133 DPE--------VV----ERSLAELRYSARLLSLLGAEDGVLVLHLGGAYG---E-KGKALRRFVENLRGEEEVLRYLALE 196 (301)
T ss_dssp CHH--------HH----HHHHHHHHHHHHHHHHTTCTTCEEEEECCCCTT---C-HHHHHHHHHHHHTTCHHHHHHEEEE
T ss_pred CHH--------HH----HHHHHHHHHHHHHHHHcCCCCCEEEECCCcCCC---C-HHHHHHHHHHHHhHHHhhcceEEEE
Confidence 111 01 22477888888888888943 66666555442 2 56666666655431 378888
Q ss_pred cC----CchhHHHHHHHhC
Q 022982 237 AT----NPRTSEWFIRRYG 251 (289)
Q Consensus 237 AP----~k~qQ~~~I~~fG 251 (289)
.- ..++=..+++..+
T Consensus 197 n~~~~~t~~el~~l~~~~~ 215 (301)
T 2j6v_A 197 NDERLWNVEEVLKAAEALG 215 (301)
T ss_dssp CCSSSCCHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHHHhcCC
Confidence 74 3455567777775
No 211
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=76.90 E-value=8.3 Score=33.54 Aligned_cols=109 Identities=14% Similarity=0.129 Sum_probs=63.5
Q ss_pred HHHHHHHhhccc-ccEEEecCccc------cccChhHHHHHHHHHHhCCceecC----Cc----HH---HHHHHhCCchH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSH------SLMPKPFIEEVVKRAHQHDVYVST----GD----WA---EHLIRNGPSAF 103 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs------~l~p~~~l~eKI~l~~~~gV~v~~----Gt----lf---E~a~~qg~~~~ 103 (289)
.+++.++.+.+. +|.+=+..... .-.+.+.+++.-++++++|+.+.. +. |. +....+.-+.+
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~ 110 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM 110 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHH
Confidence 344444444332 67776655432 112456688999999999997752 11 10 11111111268
Q ss_pred HHHHHHHHHcCCCEEEecCCcc--cC-ChhH-------HHHHHHHHHHcCCccccee
Q 022982 104 KEYVEDCKQVGFDTIELNVGSL--EI-PEET-------LLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti--~i-~~~~-------r~~lI~~~~~~G~~v~~E~ 150 (289)
++.++.|+++|.+.|=+..+.. .. ..+. ..++.+.+++.|.++.-|-
T Consensus 111 ~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 167 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEI 167 (295)
T ss_dssp HHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEee
Confidence 9999999999999998864332 11 2222 3345556677787755554
No 212
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=76.89 E-value=24 Score=38.22 Aligned_cols=147 Identities=8% Similarity=0.006 Sum_probs=99.1
Q ss_pred cccEEEecCccccccChhHHHHHHHHHHhCCceec----CCcHHHHHHH--hCCchHHHHHHHHHHcCCCEEEecCCccc
Q 022982 53 FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS----TGDWAEHLIR--NGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (289)
Q Consensus 53 yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~----~GtlfE~a~~--qg~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (289)
-+|.+-+-.. +-+-+.++.-++.++++|..+. ..+-||-... .+++.+-+..+.+.+.|.+.|=|-|-.--
T Consensus 658 g~d~irif~s---l~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~ 734 (1165)
T 2qf7_A 658 GIDLFRVFDC---LNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGL 734 (1165)
T ss_dssp TCCEEEEECT---TCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCC
T ss_pred CcCEEEEEee---HHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCC
Confidence 4777666432 3455689999999999996432 2221332222 22334666667777899999999999988
Q ss_pred CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 127 IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 127 i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
+.+.+-.++|+.++++ + ...+++.+. .+ ...-+-.+-..++|||+.|=.=-
T Consensus 735 ~~P~~~~~lv~~l~~~-~--~~~i~~H~H-nd-------------------------~GlAvAn~laAv~aGa~~vd~ti 785 (1165)
T 2qf7_A 735 LKPAAAKVLFKALREA-T--GLPIHFHTH-DT-------------------------SGIAAATVLAAVEAGVDAVDAAM 785 (1165)
T ss_dssp CCHHHHHHHHHHHHHH-C--SSCEEEEEC-BT-------------------------TSCHHHHHHHHHHTTCSEEEEBC
T ss_pred cCHHHHHHHHHHHHHh-c--CCeEEEEEC-CC-------------------------CCHHHHHHHHHHHhCCCEEEecc
Confidence 9999989999999885 2 223555331 11 22236777788999999653333
Q ss_pred cccccCCCCccHHHHHHHHhccCCC
Q 022982 207 DDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 207 rGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
.|+=...||...+.+-..++..+.+
T Consensus 786 ~GlGe~~Gn~~le~vv~~L~~~g~~ 810 (1165)
T 2qf7_A 786 DALSGNTSQPCLGSIVEALSGSERD 810 (1165)
T ss_dssp GGGCSBTSCCBHHHHHHHHTTSTTC
T ss_pred cccCCCccchhHHHHHHHHHhcCCC
Confidence 4888888999888777777665543
No 213
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=76.54 E-value=5.5 Score=34.12 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCCh-hHHHHHHHHHHHc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLEIPE-ETLLRYVRLVKSA 142 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~-~~r~~lI~~~~~~ 142 (289)
.++++.+.+.|.+.|.+......-|. +.-.++|+.+++.
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~ 130 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEK 130 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHh
Confidence 56788899999999998766543331 2345788888885
No 214
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=76.52 E-value=34 Score=29.01 Aligned_cols=120 Identities=13% Similarity=0.168 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+.+..+.+.+.|+++|++. +. ..|+.+++.- -+|=+++-.. +.+ |..+ ++.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~------~~----~~i~~i~~~~--~~p~i~~~~~--~~~---~~~~--~i~--------- 88 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN------SV----RDIKEIQAIT--DLPIIGIIKK--DYP---PQEP--FIT--------- 88 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE------SH----HHHHHHHTTC--CSCEEEECBC--CCT---TSCC--CBS---------
T ss_pred hHHHHHHHHHHCCCcEeecC------CH----HHHHHHHHhC--CCCEEeeEcC--CCC---cccc--ccC---------
Confidence 67888899999999999985 12 3466666531 1221222000 000 1000 111
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCCchhHHHHHHHhCCCc
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNPRTSEWFIRRYGPKV 254 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k~qQ~~~I~~fG~~V 254 (289)
. -.++++..+++||+.|.+.+.-..+.+|..-.++++.+-+..+--.++.+...... ..-....|.+.
T Consensus 89 -~---~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~e-a~~a~~~Gad~ 156 (234)
T 1yxy_A 89 -A---TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDE-GLVAHQAGIDF 156 (234)
T ss_dssp -C---SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHH-HHHHHHTTCSE
T ss_pred -C---hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHH-HHHHHHcCCCE
Confidence 0 15677888999999999887643333333346778877766653456667765544 44445677774
No 215
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=76.49 E-value=25 Score=32.30 Aligned_cols=177 Identities=11% Similarity=0.080 Sum_probs=104.8
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecC---C-cHHHHHHHhCCchHHHHHHHHHH--
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHLIRNGPSAFKEYVEDCKQ-- 112 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~a~~qg~~~~~~yl~~~k~-- 112 (289)
.+..+++.++.+|.=| +=++---..+.....-....+...+.++.+-| | .=.|-|+.-- +.+++
T Consensus 31 ~~~~~~~a~~asg~e~--vtva~rR~~~~~~~~~~~~~~~i~~~~~~~lpNTag~~ta~eAv~~a--------~lare~~ 100 (265)
T 1wv2_A 31 DLDETRRAIEASGAEI--VTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTC--------RLARELL 100 (265)
T ss_dssp SHHHHHHHHHHSCCSE--EEEEGGGCCC-------------CTTTSEEEEECTTCCSHHHHHHHH--------HHHHTTT
T ss_pred CHHHHHHHHHHhCCCe--EEEEEEeeccccCCCcchHHhhhhhcCCEECCcCCCCCCHHHHHHHH--------HHHHHHc
Confidence 5778889998888643 33333222221001124455666676775554 5 2355554432 34455
Q ss_pred cCCCEEE--e-cCCcccCCh-hHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHH
Q 022982 113 VGFDTIE--L-NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (289)
Q Consensus 113 lGF~~IE--I-SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I 188 (289)
+|-++|- | ||--.-+|+ .+-.+..+.+++.||+|+|= -. +| .
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy-~~----------dd-----------------------~ 146 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVY-TS----------DD-----------------------P 146 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEE-EC----------SC-----------------------H
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEE-eC----------CC-----------------------H
Confidence 5666664 3 355545544 33445666666779999872 22 11 4
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCCc---ccccCC
Q 022982 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPKV---NLFVDH 260 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP-~k~qQ~~~I~~fG~~V---NLgI~~ 260 (289)
..+++--++|++.||-+++-|=.+.|-...++|..|.+..++- ||-|+= ....+......+|.+- |=+|..
T Consensus 147 ~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP-VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 147 IIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP-VLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC-BEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC-EEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 6778888999999999997333344556789999999865543 788876 4457888888999984 445654
No 216
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=76.44 E-value=11 Score=33.55 Aligned_cols=177 Identities=13% Similarity=0.067 Sum_probs=101.6
Q ss_pred CCCCCceeEecCCCCCCCc------hhHHHHHHHh----hcccccEEEecCccccccChhHHHHHHHHHHhCCceecC--
Q 022982 21 PRRFGVTEMRSPHYTLSSS------HNVLEDIFES----MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-- 88 (289)
Q Consensus 21 PR~~GlT~V~DkGl~~~~g------~~~~~DlLe~----ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-- 88 (289)
-+..|++-++-+|..+.+. ...++.+++. +..|=+.+..+.|-+...-.+...+-++.+.+..|.--+
T Consensus 20 a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~~~vvaIGEi 99 (261)
T 3guw_A 20 LKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPDYEFVLGYLEEGEWVAFGEI 99 (261)
T ss_dssp HHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGGGCCTTTHHHHHHHTTSCCSCEEEE
T ss_pred HHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEECcccccccHHHHHHHhCcCCeEEEEEe
Confidence 3567999999999865310 1345566643 667766788888877655444466667777764432111
Q ss_pred C-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022982 89 G-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (289)
Q Consensus 89 G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~ 167 (289)
| .+. .-.++. .|.+.++.|+++|...+==+-..- ..+.-.++++.+++.|+... -+++-.. +
T Consensus 100 GLD~~-~~~Q~~--~f~~ql~lA~e~~lPv~iH~r~~~--~~~a~~~~~~il~~~~~~~~-~~vi~H~--------~--- 162 (261)
T 3guw_A 100 GLELV-TDEEIE--VLKSQLELAKRMDVPCIIHTPRGN--KLKATRKTLEILESLDFPAD-LAVIDHV--------N--- 162 (261)
T ss_dssp ECSSC-CHHHHH--HHHHHHHHHHHHTCCEEEECCSSS--TTHHHHHHHHHHHHTTCCTT-SEEEESC--------C---
T ss_pred cCCCC-hHHHHH--HHHHHHHHHHHhCCeEEEEcCCCc--ccchHHHHHHHHHHcCCCCC-CEEEEeC--------C---
Confidence 3 222 122333 699999999999998874332211 12334567777777654411 1222110 0
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecccc-ccCCCCccHHHHHHHHhccCCCceEEecCCch
Q 022982 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDV-CKHADSLRADIIAKVIGRLGLEKTMFEATNPR 241 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI-~d~~G~~r~d~v~~ii~~l~~eklifEAP~k~ 241 (289)
.+++++.++.|.+.=+-=.-|+ +.++ ..++++.+|++||++|..-|-
T Consensus 163 --------------------~~~a~~~l~~G~yis~~~~pg~~t~~~-------~~~~v~~ipldrlLlETD~P~ 210 (261)
T 3guw_A 163 --------------------FETLDMVLETEYWIGLTVQPGKLSAED-------AARIVAEHGPERFMLNSDAGY 210 (261)
T ss_dssp --------------------TTTHHHHHTSSSEEEEECC-------C-------CTTGGGGCC-CCEEEECCCCC
T ss_pred --------------------HHHHHHHHhCCEEEEecCCCCcccHHH-------HHHHHHhCCcceEEEecCCCC
Confidence 2456667888865433201132 2221 136788999999999988774
No 217
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=76.36 E-value=43 Score=30.07 Aligned_cols=103 Identities=19% Similarity=0.220 Sum_probs=63.6
Q ss_pred chhHHHHHHHhhcccccEEEecCccc-cccChhHHH-----------------HHHHHHHhC-CceecCCcHHHHHHHhC
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH-DVYVSTGDWAEHLIRNG 99 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~-gV~v~~GtlfE~a~~qg 99 (289)
.+....++++..-+.+|++=+|.=-| .+.+-..++ +-+.-.|++ ++++..=++.-.++..+
T Consensus 28 ~~~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g 107 (271)
T 1ujp_A 28 SREGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWG 107 (271)
T ss_dssp CHHHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHC
T ss_pred ChHHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhh
Confidence 33455556655444499999975332 111122232 334444544 33322215556666664
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
+++|++.|++.|+|.+=+. ++|.++..++++.++++|+...+
T Consensus 108 ---~~~f~~~~~~aG~dGviv~----Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 108 ---PERFFGLFKQAGATGVILP----DLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp ---HHHHHHHHHHHTCCEEECT----TCCGGGCHHHHHHHHHHTCEEEC
T ss_pred ---HHHHHHHHHHcCCCEEEec----CCCHHHHHHHHHHHHHcCCceEE
Confidence 7999999999999977775 45557888999999999886444
No 218
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=76.34 E-value=5 Score=36.45 Aligned_cols=89 Identities=12% Similarity=0.148 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
.++-+.+++.|.+.|=.| |.+ .+.||.....+|. |-|=++.+ .+. .
T Consensus 147 ~~~A~~a~~~G~dGvV~s------~~e--~~~ir~~~~~~f~~vtPGIr~~--g~~---~-------------------- 193 (259)
T 3tfx_A 147 LSLAKMAKHSGADGVICS------PLE--VKKLHENIGDDFLYVTPGIRPA--GNA---K-------------------- 193 (259)
T ss_dssp HHHHHHHHHTTCCEEECC------GGG--HHHHHHHHCSSSEEEECCCCCC-----------------------------
T ss_pred HHHHHHHHHhCCCEEEEC------HHH--HHHHHhhcCCccEEEcCCcCCC--CCC---c--------------------
Confidence 355667788898877665 322 4677777766665 34533331 111 1
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
+-+.+|-.++..++||||++++ +|.||.+... ...+++|.+.+
T Consensus 194 gDQ~Rv~T~~~a~~aGad~iVv-Gr~I~~a~dp--~~a~~~i~~~~ 236 (259)
T 3tfx_A 194 DDQSRVATPKMAKEWGSSAIVV-GRPITLASDP--KAAYEAIKKEF 236 (259)
T ss_dssp -------CHHHHHHTTCSEEEE-CHHHHTSSSH--HHHHHHHHHHH
T ss_pred CCccccCCHHHHHHcCCCEEEE-ChHHhCCCCH--HHHHHHHHHHH
Confidence 1344567777888999997666 7999998752 34455555433
No 219
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=76.13 E-value=6.5 Score=36.77 Aligned_cols=21 Identities=14% Similarity=0.422 Sum_probs=18.0
Q ss_pred cHHHHHHHHHHHHHccCcEEEE
Q 022982 183 DVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~Vii 204 (289)
+.++.++.++..-++ +++|-+
T Consensus 228 ~~~~~~~~a~~l~~~-vd~i~v 248 (343)
T 3kru_A 228 NIDMMVEYINMIKDK-VDLIDV 248 (343)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEE
T ss_pred cHHHHHHHHHHhhcc-ccEEec
Confidence 578888888888888 999988
No 220
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.09 E-value=5.5 Score=35.88 Aligned_cols=78 Identities=21% Similarity=0.189 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHcCCC---EEEecCCccc--------CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccc
Q 022982 102 AFKEYVEDCKQVGFD---TIELNVGSLE--------IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~---~IEISdGti~--------i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~ 169 (289)
.+.+..+.+.+.||| +|||+-++=. -+.+...++|+.+++. + +| +.+|-..
T Consensus 107 ~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~---~P-v~vK~~~------------- 169 (314)
T 2e6f_A 107 ENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYG---LP-FGVKMPP------------- 169 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHC---SC-EEEEECC-------------
T ss_pred HHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcC---CC-EEEEECC-------------
Confidence 455556667778999 9999765221 1456667888888874 2 12 4555311
Q ss_pred ccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEecc
Q 022982 170 YVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSD 207 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEar 207 (289)
. | |.+++.+.++...++| |+.|++-.+
T Consensus 170 ----~-~------~~~~~~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 170 ----Y-F------DIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp ----C-C------CHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred ----C-C------CHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 0 1 3667778888889999 999997765
No 221
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=75.84 E-value=11 Score=32.64 Aligned_cols=109 Identities=11% Similarity=0.158 Sum_probs=65.4
Q ss_pred HHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecCC-c------HH---HHHHHhCCchHHHHHHHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WA---EHLIRNGPSAFKEYVEDC 110 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-t------lf---E~a~~qg~~~~~~yl~~~ 110 (289)
.+++.++.+.+. .|.+=+......-+..+.+++.-++++++|+.+... + |. +....+.-+.+++.++.|
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRL 97 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 355666655555 677777654333345677999999999999976542 1 11 111111112688899999
Q ss_pred HHcCCCEEEe--cCCcc-----cCCh-hH-------HHHHHHHHHHcCCccccee
Q 022982 111 KQVGFDTIEL--NVGSL-----EIPE-ET-------LLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 111 k~lGF~~IEI--SdGti-----~i~~-~~-------r~~lI~~~~~~G~~v~~E~ 150 (289)
+++|.+.|=+ ..|.- ..+. +. ..++.+.+++.|.++.-|-
T Consensus 98 ~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 152 (294)
T 3vni_A 98 YKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEV 152 (294)
T ss_dssp HHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 9999999963 33321 1222 22 2345566777788755554
No 222
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=75.69 E-value=23 Score=31.95 Aligned_cols=85 Identities=15% Similarity=0.267 Sum_probs=61.5
Q ss_pred ccEEEe-cCccccccChhHHHHHHHHHHhCCceec--C-CcHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCccc-
Q 022982 54 VDGLKF-SGGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLE- 126 (289)
Q Consensus 54 ID~lKf-g~GTs~l~p~~~l~eKI~l~~~~gV~v~--~-GtlfE~a~~qg~~~~~~yl~~~k~lG--F~~IEISdGti~- 126 (289)
++.+-| |+|.-.+.| .+.+.++.++++|+.+. + |++ ++.++.+++.| .+.|-||=-+.+
T Consensus 142 ~~~v~~sggGEPll~~--~l~~ll~~~~~~g~~i~l~TNG~~------------~e~l~~L~~~g~~~~~l~isld~~~~ 207 (342)
T 2yx0_A 142 PTHAAISLSGEPMLYP--YMGDLVEEFHKRGFTTFIVTNGTI------------PERLEEMIKEDKLPTQLYVSITAPDI 207 (342)
T ss_dssp CCEEEECSSSCGGGST--THHHHHHHHHHTTCEEEEEECSCC------------HHHHHHHHHTTCCCSEEEEEECCSSH
T ss_pred CCEEEEcCCCcccchh--hHHHHHHHHHHCCCcEEEEcCCCc------------HHHHHHHHhcCCCCCEEEEEccCCCH
Confidence 566888 588888887 69999999999998544 4 443 45566677877 899999855431
Q ss_pred ------------CChhHHHHHHHHHHHcCCcccceeee
Q 022982 127 ------------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 127 ------------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-+.++..+.|+.+++.|+.+.-++-+
T Consensus 208 e~~~~i~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~l 245 (342)
T 2yx0_A 208 ETYNSVNIPMIPDGWERILRFLELMRDLPTRTVVRLTL 245 (342)
T ss_dssp HHHHHHHCBSSSCHHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred HHHHHHhCCCcccHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 12566677888888888776666555
No 223
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=75.61 E-value=8.3 Score=36.30 Aligned_cols=66 Identities=15% Similarity=0.209 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
..+..+.+.+.|++.|+|+-+. . .++...++|+.+++. ++.|.. +.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~-g-~~~~~~e~i~~ir~~~~~~pviv----~~-------------------------- 201 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAH-G-HSTRIIELIKKIKTKYPNLDLIA----GN-------------------------- 201 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-C-SSHHHHHHHHHHHHHCTTCEEEE----EE--------------------------
T ss_pred HHHHHHHHHHCCCCEEEEeCCC-C-ChHHHHHHHHHHHHHCCCCeEEE----cC--------------------------
Confidence 4566777888999999994322 1 235556788888885 444321 10
Q ss_pred cccHHHHHHHHHHHHHccCcEEEE
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
..+ .+.++...++|||.|++
T Consensus 202 v~~----~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 202 IVT----KEAALDLISVGADCLKV 221 (404)
T ss_dssp ECS----HHHHHHHHTTTCSEEEE
T ss_pred CCc----HHHHHHHHhcCCCEEEE
Confidence 001 46777788999999999
No 224
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=75.56 E-value=2.8 Score=39.79 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=35.9
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
++++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 56 LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 56 LPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp HHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5677899999999973 22111 3689999999999999999877644
No 225
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=75.50 E-value=12 Score=32.07 Aligned_cols=94 Identities=20% Similarity=0.290 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
...++.+.+.+.|.++|.+++-.-.-. ...-.++|+.+++. .. .| +-+.. .
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~-ip-vi~~g--------------g----------- 82 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-ID-IP-FTVGG--------------G----------- 82 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CC-SC-EEEES--------------S-----------
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-CC-CC-EEEeC--------------C-----------
Confidence 345566777889999999997653322 22335677777763 00 11 11110 0
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCce
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT 233 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekl 233 (289)
+.++ ++++..+++|||.|++=..-+.+ .+.+.++++.++.+++
T Consensus 83 I~~~----~~~~~~~~~Gad~V~lg~~~l~~------p~~~~~~~~~~g~~~i 125 (253)
T 1thf_D 83 IHDF----ETASELILRGADKVSINTAAVEN------PSLITQIAQTFGSQAV 125 (253)
T ss_dssp CCSH----HHHHHHHHTTCSEEEESHHHHHC------THHHHHHHHHHCGGGE
T ss_pred CCCH----HHHHHHHHcCCCEEEEChHHHhC------hHHHHHHHHHcCCCcE
Confidence 1123 55777889999999985442322 3567778777776654
No 226
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=75.49 E-value=17 Score=30.76 Aligned_cols=139 Identities=16% Similarity=0.211 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCC-ccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPS-DRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~-~~d~~~~~~~~~~~~~~~~ 180 (289)
.+++.++.++++||+ ||+.-....++.+. ++-+..+..+ . .+.+-.+..++.. ..|++ .+
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~~~~~~~~~--~~~~~~~~~~-~---~~~~h~~~~~~~l~~~~~~--------~r---- 71 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLDPALLEEDA--LFQSLRRRFS-G---KLSVHLPFWNLDLLSPDPE--------VR---- 71 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECCGGGTTCHH--HHHHHHHHCC-S---CEEEECCCTTCCTTCSSHH--------HH----
T ss_pred HHHHHHHHHHhcCCC-EEEeccccccCcHH--HHHHHHHHhC-C---CeEEecCccCCCCCCCCHH--------HH----
Confidence 688999999999999 99965544444442 2222333332 1 2222211110100 01110 00
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEeccccccC-----CCCcc--HHHHH---HHHhccCCCceEEecC---CchhHHHHH
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKH-----ADSLR--ADIIA---KVIGRLGLEKTMFEAT---NPRTSEWFI 247 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~-----~G~~r--~d~v~---~ii~~l~~eklifEAP---~k~qQ~~~I 247 (289)
....+.+.+.++..-+.||.+|.+-+-..... ...++ .+.+. +.++..|+ +|.+|.- .+.+-..++
T Consensus 72 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~l~ 150 (254)
T 3ayv_A 72 GLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGV-RLLLENSHEPHPEALRPVL 150 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTC-EEEEECSSCSSGGGTHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCC-EEEEcCCCCCCHHHHHHHH
Confidence 11244555666666689999998865321111 00010 11122 22333444 6778853 456778899
Q ss_pred HHhCCCcccccCC
Q 022982 248 RRYGPKVNLFVDH 260 (289)
Q Consensus 248 ~~fG~~VNLgI~~ 260 (289)
+..+|+|-+.+|.
T Consensus 151 ~~v~~~vg~~~D~ 163 (254)
T 3ayv_A 151 EAHAGELGFCFDA 163 (254)
T ss_dssp HHHTTSSEEEEEH
T ss_pred HhcCcCEEEEEEc
Confidence 9999665554444
No 227
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=75.44 E-value=11 Score=33.63 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=13.4
Q ss_pred HHHHHHHHccCcEEEEec
Q 022982 189 RRAERCLEAGADMIMIDS 206 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEa 206 (289)
++++. +.+|||-|||=+
T Consensus 219 e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 219 EHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHH-HHTTSSEEEECH
T ss_pred HHHHH-HHcCCCEEEECH
Confidence 55666 889999999954
No 228
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=75.26 E-value=3.5 Score=35.81 Aligned_cols=95 Identities=14% Similarity=0.238 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC-ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEI-PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i-~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
...++.+.+.+.|+++|-++|-+-.- ....-.++|+++++. +++..-. . |.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-------~~ipvi~-----~-----Gg----------- 87 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-------TTLPIIA-----S-----GG----------- 87 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-------CCSCEEE-----E-----SC-----------
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-------CCCCEEE-----e-----CC-----------
Confidence 46678888899999999998754321 112224678887773 2221100 0 00
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceE
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekli 234 (289)
+.| .+.++..+++||+.|++=.. ... +.+.+.++.+.+|.++++
T Consensus 88 i~~----~~~~~~~l~~Gad~V~ig~~-~l~-----dp~~~~~~~~~~g~~~iv 131 (247)
T 3tdn_A 88 AGK----MEHFLEAFLRGADKVSINTA-AVE-----NPSLITQIAQTFGSQAVV 131 (247)
T ss_dssp CCS----HHHHHHHHHTTCSEECCSHH-HHH-----CTHHHHHHHHHHC-----
T ss_pred CCC----HHHHHHHHHcCCCeeehhhH-Hhh-----ChHHHHHHHHHhCCCcEE
Confidence 112 35577778999999998443 221 134577777777766665
No 229
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=75.16 E-value=3.5 Score=36.82 Aligned_cols=92 Identities=9% Similarity=0.045 Sum_probs=59.6
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
......++++..++|++++|+|.--..-+.. +-|+.++++|..+..-- +..+ |+-+..|.+.+.++|.|.
T Consensus 19 ~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G~----~~v~~L~~~g~~iflDlK~~DI-----~nTv~~~~~~~~~~gad~ 89 (239)
T 3tr2_A 19 TVEQARAQINPLTPELCHLKIGSILFTRYGP----AFVEELMQKGYRIFLDLKFYDI-----PQTVAGACRAVAELGVWM 89 (239)
T ss_dssp SHHHHHHHHTTCCTTTCEEEEEHHHHHHHHH----HHHHHHHHTTCCEEEEEEECSC-----HHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhCCcccEEEeCHHHHHhhCH----HHHHHHHhcCCCEEEEeccccc-----chHHHHHHHHHHhCCCCE
Confidence 5678899999999999999999754432322 23444556666555421 2111 234566778899999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHc
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKSA 142 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~ 142 (289)
|-|.- ....+....+++.+++.
T Consensus 90 vTvh~---~~G~~~~~~a~~~~~~~ 111 (239)
T 3tr2_A 90 MNIHI---SGGRTMMETVVNALQSI 111 (239)
T ss_dssp EEEEG---GGCHHHHHHHHHHHHTC
T ss_pred EEEec---cCCHHHHHHHHHHHHhc
Confidence 99964 23455555566666553
No 230
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=74.87 E-value=15 Score=34.08 Aligned_cols=94 Identities=20% Similarity=0.146 Sum_probs=63.6
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC------------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEI------------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i------------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~ 170 (289)
++.-++.++..|.+.|-|...+-++ ..+.-.+.|+.+++.|..| +|+-.+.
T Consensus 83 i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v--~f~~~d~--------------- 145 (325)
T 3eeg_A 83 INIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEV--EFFCEDA--------------- 145 (325)
T ss_dssp HHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEE--EEEEETG---------------
T ss_pred HHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE--EEEcccc---------------
Confidence 4444444555599988875443322 2233457899999999875 4554321
Q ss_pred cccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
+..|++.+++.+++..++||+.| .|.|..|-..+..+.++++.
T Consensus 146 ---------~~~~~~~~~~~~~~~~~~G~~~i-----~l~DT~G~~~P~~v~~lv~~ 188 (325)
T 3eeg_A 146 ---------GRADQAFLARMVEAVIEAGADVV-----NIPDTTGYMLPWQYGERIKY 188 (325)
T ss_dssp ---------GGSCHHHHHHHHHHHHHHTCSEE-----ECCBSSSCCCHHHHHHHHHH
T ss_pred ---------ccchHHHHHHHHHHHHhcCCCEE-----EecCccCCcCHHHHHHHHHH
Confidence 01258899999999999999865 47888888888877777643
No 231
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=74.73 E-value=3.5 Score=38.49 Aligned_cols=50 Identities=14% Similarity=0.146 Sum_probs=37.0
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc-c--CC----hhHHHHHHHHHHHcCCcccc
Q 022982 99 GPSAFKEYVEDCKQVGFDTIELNVGSL-E--IP----EETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti-~--i~----~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+-.+++.++.++++||+.||+++.-+ . .+ .++..++-+.+++.|+++..
T Consensus 31 ~~~~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (393)
T 1xim_A 31 TALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPM 87 (393)
T ss_dssp CCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CCCCHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEE
Confidence 334788999999999999999983221 1 12 45677788888999998753
No 232
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=74.36 E-value=30 Score=29.59 Aligned_cols=69 Identities=16% Similarity=0.297 Sum_probs=48.7
Q ss_pred HHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 73 EEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 73 ~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+-|+-.+++ ++++..++.....+.. .++++++.|.+.|.+.|=+. +++.++..++++.+++.|.++.+
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~---~~~~~~~~~~~~Gad~v~~~----~~~~~~~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRA---GVRNFLAEAKASGVDGILVV----DLPVFHAKEFTEIAREEGIKTVF 138 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHH---CHHHHHHHHHHHTCCEEEET----TCCGGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhc---CHHHHHHHHHHCCCCEEEEC----CCChhhHHHHHHHHHHhCCCeEE
Confidence 4455555544 6666666644444555 47899999999999999996 34456677899999998877554
No 233
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=74.36 E-value=15 Score=33.49 Aligned_cols=34 Identities=15% Similarity=0.278 Sum_probs=21.2
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHH
Q 022982 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVI 225 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii 225 (289)
+.+++..++||+-|+| ++.|+++.. -...+.+++
T Consensus 233 edv~~l~~~Ga~gvLV-G~almr~~d--~~~~~~~l~ 266 (272)
T 3tsm_A 233 EDCLRLEKSGIGTFLI-GESLMRQHD--VAAATRALL 266 (272)
T ss_dssp HHHHHHHTTTCCEEEE-CHHHHTSSC--HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEE-cHHHcCCcC--HHHHHHHHH
Confidence 4556667999999988 444666553 233444444
No 234
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=74.29 E-value=15 Score=34.32 Aligned_cols=19 Identities=21% Similarity=0.274 Sum_probs=15.8
Q ss_pred HHHHHHHHccCcEEEEeccc
Q 022982 189 RRAERCLEAGADMIMIDSDD 208 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarG 208 (289)
+.+++.+++|||.|++ ++|
T Consensus 223 e~a~~~~~~Gad~i~v-g~G 241 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIV-GGG 241 (393)
T ss_dssp HHHHHHHTTTCSEEEE-SCC
T ss_pred HHHHHHHHcCCCEEEE-CCC
Confidence 4577888999999999 774
No 235
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=73.96 E-value=9.8 Score=36.93 Aligned_cols=67 Identities=21% Similarity=0.208 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
...+..+.+.+.|++.|+|.-+.-. .+...++|+.+++. ++.|.. +. + .
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~--~~~~~~~i~~i~~~~~~~pvi~----~~----v-----------~-------- 305 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGN--SVYQIAMVHYIKQKYPHLQVIG----GN----V-----------V-------- 305 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCC--SHHHHHHHHHHHHHCTTCEEEE----EE----E-----------C--------
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCc--chhHHHHHHHHHHhCCCCceEe----cc----c-----------c--------
Confidence 3567778889999999999333211 13345788888886 443321 10 0 0
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEE
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
+ .+.+++..++|||.|.+
T Consensus 306 ---t----~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 306 ---T----AAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp ---S----HHHHHHHHHHTCSEEEE
T ss_pred ---h----HHHHHHHHHcCCCEEEE
Confidence 1 46688888999999999
No 236
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=73.83 E-value=12 Score=34.35 Aligned_cols=137 Identities=13% Similarity=0.126 Sum_probs=79.6
Q ss_pred HHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 110 CKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 110 ~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
+.+.|||+|=+.|. +..++.++.+...+.+.+. .+.+. .--|-.|+.|-
T Consensus 33 ~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~---------~~~~~----vvaD~pfgsy~-------- 91 (275)
T 1o66_A 33 MDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARG---------AKNAM----IVSDLPFGAYQ-------- 91 (275)
T ss_dssp HHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHH---------CSSSE----EEEECCTTSSS--------
T ss_pred HHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhh---------CCCCe----EEEECCCCCcc--------
Confidence 45689999965432 3578889988888888772 11100 00122232221
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEecc-------------cc------------------ccCCCCc--cHHHHHHH--
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSD-------------DV------------------CKHADSL--RADIIAKV-- 224 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------GI------------------~d~~G~~--r~d~v~~i-- 224 (289)
.++++.++.+.+.+++||+.|-+|+- || |.-.|+- -.++++.-
T Consensus 92 --~s~~~a~~na~rl~kaGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a 169 (275)
T 1o66_A 92 --QSKEQAFAAAAELMAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKA 169 (275)
T ss_dssp --SCHHHHHHHHHHHHHTTCSEEEEECSGGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHcCCcEEEECCcHHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHH
Confidence 15899999999999999999999984 32 1111211 12333322
Q ss_pred HhccCCCceEEecCCchhHHHHHHHhCCCccc-c---cCCCCchhhhhh
Q 022982 225 IGRLGLEKTMFEATNPRTSEWFIRRYGPKVNL-F---VDHSQVMDLECL 269 (289)
Q Consensus 225 i~~l~~eklifEAP~k~qQ~~~I~~fG~~VNL-g---I~~~eVl~LE~L 269 (289)
+..-|.+-|..|+...++-..+-+....=+|- | ---.||+-..-|
T Consensus 170 ~~eAGA~~ivlE~vp~~~a~~it~~l~iP~igIGaG~~~dgQvLV~~D~ 218 (275)
T 1o66_A 170 HDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDM 218 (275)
T ss_dssp HHHTTCSEEEEESCCHHHHHHHHHHCSSCEEEESSCSCSSEEEECHHHH
T ss_pred HHHcCCcEEEEecCCHHHHHHHHHhCCCCEEEECCCCCCCcceeeHHhh
Confidence 25678999999997655555555555433332 2 223456655533
No 237
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=73.74 E-value=37 Score=29.99 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=77.2
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
..+++++|.++|-+-----.+...+-.+.++.+.+.||.|+-|+|=.
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~--------------------------------- 127 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNP--------------------------------- 127 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSH---------------------------------
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCH---------------------------------
Confidence 78999999999999777655777778899999999999999998861
Q ss_pred HHHHHHHHHHccCcEEEEeccccccCC---CCccHHH---HHHHHhccC-CCceEEecCCc-hhHHHHHHHhCCCccc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKHA---DSLRADI---IAKVIGRLG-LEKTMFEATNP-RTSEWFIRRYGPKVNL 256 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~~---G~~r~d~---v~~ii~~l~-~eklifEAP~k-~qQ~~~I~~fG~~VNL 256 (289)
.+.++..+.++..|=+|-|-.--.. -....|. ..+++..++ --+++-|.--+ .....++...|.|==|
T Consensus 128 --~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~L 203 (225)
T 1hg3_A 128 --AVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVL 203 (225)
T ss_dssp --HHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred --HHHHHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEE
Confidence 0112235567888888888432111 1333443 334444444 34678888744 5666777776665444
No 238
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=73.67 E-value=8.7 Score=32.09 Aligned_cols=126 Identities=12% Similarity=0.144 Sum_probs=76.1
Q ss_pred chhHHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhC---CceecCCcHHHHHHHhCCchHHHHHHHHHHcC
Q 022982 39 SHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQH---DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVG 114 (289)
Q Consensus 39 g~~~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~---gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lG 114 (289)
.+....++.+.+-++ +|++-+.+++... .+-|+.+|+. ++.+-.|+- . ..++ .+.|.+.|
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~------~~~i~~ir~~~~~~~~ig~~~v------~---~~~~-~~~a~~~G 83 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDA------DTVIKELSFLKEKGAIIGAGTV------T---SVEQ-CRKAVESG 83 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTH------HHHHHHTHHHHHTTCEEEEESC------C---SHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhH------HHHHHHHHHHCCCCcEEEeccc------C---CHHH-HHHHHHcC
Confidence 345666666666555 8999888776321 2223334332 454433331 1 2233 46677899
Q ss_pred CCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHH
Q 022982 115 FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERC 194 (289)
Q Consensus 115 F~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~d 194 (289)
.|+| ++.++- .++++.+++.|..++| |+. |+ +++++.
T Consensus 84 ad~i-v~~~~~-------~~~~~~~~~~g~~vi~--g~~-----------------------------t~----~e~~~a 120 (205)
T 1wa3_A 84 AEFI-VSPHLD-------EEISQFCKEKGVFYMP--GVM-----------------------------TP----TELVKA 120 (205)
T ss_dssp CSEE-ECSSCC-------HHHHHHHHHHTCEEEC--EEC-----------------------------SH----HHHHHH
T ss_pred CCEE-EcCCCC-------HHHHHHHHHcCCcEEC--CcC-----------------------------CH----HHHHHH
Confidence 9999 998864 3588889999999888 331 12 235567
Q ss_pred HHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 195 LEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 195 LeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
+++||+.|-+-.... ...+.+.++.+.++
T Consensus 121 ~~~Gad~vk~~~~~~------~g~~~~~~l~~~~~ 149 (205)
T 1wa3_A 121 MKLGHTILKLFPGEV------VGPQFVKAMKGPFP 149 (205)
T ss_dssp HHTTCCEEEETTHHH------HHHHHHHHHHTTCT
T ss_pred HHcCCCEEEEcCccc------cCHHHHHHHHHhCC
Confidence 899999987643211 12355566655443
No 239
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=73.65 E-value=13 Score=34.18 Aligned_cols=117 Identities=16% Similarity=0.191 Sum_probs=71.6
Q ss_pred HHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 110 CKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 110 ~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
+.+.|||+|=+.|+ +..++.++.+...+.+.+. -+-.| +-. |-.|+.|
T Consensus 45 ~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~-~~~~~-vva-----------D~pfgsY--------- 102 (275)
T 3vav_A 45 LDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARA-QPRAL-IVA-----------DLPFGTY--------- 102 (275)
T ss_dssp HHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHT-CCSSE-EEE-----------ECCTTSC---------
T ss_pred HHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhc-CCCCC-EEE-----------ecCCCCC---------
Confidence 35789999955443 3468889988888888772 11000 111 2222222
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEecc-------------c--------c----------ccCCCCccHHHHHHHH---
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSD-------------D--------V----------CKHADSLRADIIAKVI--- 225 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------G--------I----------~d~~G~~r~d~v~~ii--- 225 (289)
.++++.++.+.+.+++||+.|-+|+- | + |.-.|+ ..+..++++
T Consensus 103 --~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgr-t~~~a~~~i~rA 179 (275)
T 3vav_A 103 --GTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGK-TEAGAAQLLRDA 179 (275)
T ss_dssp --SSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCC-SHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcC-CHHHHHHHHHHH
Confidence 15999999999999999999999973 2 1 111232 112334444
Q ss_pred ---hccCCCceEEecCCchhHHHHHHHhC
Q 022982 226 ---GRLGLEKTMFEATNPRTSEWFIRRYG 251 (289)
Q Consensus 226 ---~~l~~eklifEAP~k~qQ~~~I~~fG 251 (289)
..-|.+-|..|+....+-..+-++..
T Consensus 180 ~a~~eAGA~~ivlE~vp~~~a~~It~~l~ 208 (275)
T 3vav_A 180 RAVEEAGAQLIVLEAVPTLVAAEVTRELS 208 (275)
T ss_dssp HHHHHHTCSEEEEESCCHHHHHHHHHHCS
T ss_pred HHHHHcCCCEEEecCCCHHHHHHHHHhCC
Confidence 45688999999986654444445543
No 240
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=73.21 E-value=19 Score=35.05 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=23.0
Q ss_pred cHHHHHHHHHHHHHccCcEEEEecccc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDV 209 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI 209 (289)
+.+++.+.++...++|||.|++-.+..
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGMIISNTTT 335 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 356788899999999999999988754
No 241
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=73.11 E-value=3.9 Score=38.01 Aligned_cols=48 Identities=19% Similarity=0.266 Sum_probs=36.3
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc-c--CC----hhHHHHHHHHHHHcCCcccc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSL-E--IP----EETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti-~--i~----~~~r~~lI~~~~~~G~~v~~ 148 (289)
..+++.++.++++||+.||+++..+ . .+ .++..++.+.+++.|+++..
T Consensus 33 ~~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~ 87 (387)
T 1bxb_A 33 LDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPM 87 (387)
T ss_dssp CCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CCHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEE
Confidence 3688999999999999999983221 1 12 45677888889999998753
No 242
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=73.08 E-value=3.4 Score=40.84 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 182 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 182 LDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5778999999999982 22111 2689999999999999999877644
No 243
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=72.89 E-value=3.9 Score=43.64 Aligned_cols=66 Identities=24% Similarity=0.473 Sum_probs=43.8
Q ss_pred hhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-HHH---------HH---HHhCCc----hHHHHHHHHH
Q 022982 49 SMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAE---------HL---IRNGPS----AFKEYVEDCK 111 (289)
Q Consensus 49 ~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE---------~a---~~qg~~----~~~~yl~~~k 111 (289)
..=+|||++=. |. + +.|+. .-|+.||+|||+|. || +|| .+ +.++.+ -.++.++.|+
T Consensus 237 ~~WqyVD~fVY-fS-h-~IPp~---~winaAHrnGV~VL-GT~i~ew~~~~~~~~~~~~~L~~d~~g~~~~A~KLveiAk 309 (937)
T 3gdb_A 237 DYWQYLDSMVF-WE-G-LVPTP---DVIDAGHRNGVPVY-GTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAK 309 (937)
T ss_dssp CCGGGCSEEEE-TT-C-SSCCH---HHHHHHHHTTCCEE-EEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHH
T ss_pred eeccceeeeee-cc-c-ccCCc---hHHHHHHhcCCeEE-EEEecCcccchhhHHHHHHHhccCccchhHHHHHHHHHHH
Confidence 44578997742 53 3 35643 78999999999885 43 222 22 223322 2779999999
Q ss_pred HcCCCE----EEec
Q 022982 112 QVGFDT----IELN 121 (289)
Q Consensus 112 ~lGF~~----IEIS 121 (289)
.+|||. +|..
T Consensus 310 yyGFDGWlINiE~~ 323 (937)
T 3gdb_A 310 YYGYDGYFINQETT 323 (937)
T ss_dssp HHTCCEEEEEEEEC
T ss_pred HcCcCceEeccccc
Confidence 999998 6664
No 244
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=72.85 E-value=3.8 Score=39.04 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=35.5
Q ss_pred HHHHHHcCCCEEEecCCcc--------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNVGSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti--------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+++|+||+++|+++==+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 38 LdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 38 LDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp HHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5678999999999863111 11 3578999999999999999877754
No 245
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=72.85 E-value=4.5 Score=38.08 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=73.8
Q ss_pred HHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCC---------
Q 022982 107 VEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI--------- 159 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~ev--------- 159 (289)
|+++++|||++|+++- |.- .+ +.++..++|+.+.++|++|+-.+-...-..+-
T Consensus 29 LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~~f~~~~~~ 108 (441)
T 1lwj_A 29 VSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHTWFQKALKG 108 (441)
T ss_dssp HHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTTCHHHHHHHTT
T ss_pred hHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCchHHHHHHhcc
Confidence 5677999999999873 211 11 36899999999999999998665432110000
Q ss_pred -----------CCccc---c-cccc---c----------------cccCCCCccccccHHHHHHHHHHHHHccCcEEEEe
Q 022982 160 -----------PSDRD---R-AFGA---Y----------------VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 160 -----------g~~~d---~-~~~~---~----------------~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
+...+ + .++. + .+.-.|....+ .+.+++.++..++.|+|=.-+.
T Consensus 109 ~~~y~d~y~~~~~~~~~~~~~~~~~~~~w~~~~~~~~y~~~f~~~~pdln~~np~V--~~~l~~~~~~wl~~gvDGfR~D 186 (441)
T 1lwj_A 109 DPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYDNPQV--FDEMKRLVLHLLDMGVDGFRFD 186 (441)
T ss_dssp CHHHHTTBCBCCTTSCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCSSSHHH--HHHHHHHHHHHHTTTCCEEEET
T ss_pred CCCCcceeeecCCCCCCcccccCCCccccccccCCceEEcccCCCCCccCCCCHHH--HHHHHHHHHHHHhCCCCEEEEe
Confidence 00000 0 0000 0 00000111111 4678888899999999999888
Q ss_pred cc-ccccCCCCccHHHHHHHHhccCCCceEEecCC
Q 022982 206 SD-DVCKHADSLRADIIAKVIGRLGLEKTMFEATN 239 (289)
Q Consensus 206 ar-GI~d~~G~~r~d~v~~ii~~l~~eklifEAP~ 239 (289)
+= .+.+ +..-..+.+.++.+.+... ++=|+..
T Consensus 187 ~~~~i~~-~~~~~~~~~~~~~~~~~~~-~igE~~~ 219 (441)
T 1lwj_A 187 AAKHMRD-TIEQNVRFWKYFLSDLKGI-FLAEIWA 219 (441)
T ss_dssp TGGGSSS-SHHHHHHHHHHHTTTCCSE-EEECCCS
T ss_pred Chhhhcc-CCccHHHHHHHHHHHhHhh-EEEccCC
Confidence 85 4442 2111345666666655432 7778765
No 246
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=72.82 E-value=3.5 Score=39.11 Aligned_cols=133 Identities=10% Similarity=0.140 Sum_probs=79.3
Q ss_pred HHHHHHHHcCCCEEEecC-------Cc-----ccC-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022982 105 EYVEDCKQVGFDTIELNV-------GS-----LEI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd-------Gt-----i~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~ 167 (289)
+-|+++++||+++|.++- |. ..+ +.++..++|+.+.++|++|+-.+-..+ .+ +.+=|
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH-~s-----~~~wF 113 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNY-RG-----ENSWF 113 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTTT-TS-----SSTTC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCCc-CC-----Ccccc
Confidence 346678999999999983 11 111 258999999999999999998876632 11 11111
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc-cccCCCCccHHHHHHHHhccCCCc-eEEecCCchhHHH
Q 022982 168 GAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD-VCKHADSLRADIIAKVIGRLGLEK-TMFEATNPRTSEW 245 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG-I~d~~G~~r~d~v~~ii~~l~~ek-lifEAP~k~qQ~~ 245 (289)
.. +...+ .+.+++.++-.|+.|+|=.-+.+=+ +.+.. .. -..+.++++.+..++ +|.|...... ..
T Consensus 114 ----~~---q~~~V--r~~~~~~~~~Wl~~gvDGfRlD~v~~~~~~~-~~-~~~~~~~~~~~~~~~~~i~~e~~~~~-~~ 181 (424)
T 2dh2_A 114 ----ST---QVDTV--ATKVKDALEFWLQAGVDGFQVRDIENLKDAS-SF-LAEWQNITKGFSEDRLLIAGTNSSDL-QQ 181 (424)
T ss_dssp ----SS---CHHHH--HHHHHHHHHHHHHHTCCEEEECCGGGSTTHH-HH-HHHHHHHHHHHCTTCEEEEECSCCCH-HH
T ss_pred ----cc---cCHHH--HHHHHHHHHHHHHcCCCEEEEeccccCCccH-HH-HHHHHHHHHHhCCCcEEEEEEecCCH-HH
Confidence 00 00111 4677888889999999999887653 22210 01 112344556676665 4668764322 22
Q ss_pred HHHHhCCCcc
Q 022982 246 FIRRYGPKVN 255 (289)
Q Consensus 246 ~I~~fG~~VN 255 (289)
.++-++..-+
T Consensus 182 ~~~~~~~~~~ 191 (424)
T 2dh2_A 182 ILSLLESNKD 191 (424)
T ss_dssp HHHHTTTCTT
T ss_pred HHHHhccccc
Confidence 3455565444
No 247
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=72.82 E-value=19 Score=34.47 Aligned_cols=50 Identities=14% Similarity=0.197 Sum_probs=38.6
Q ss_pred HHHHHHHHHcCCCEEEec--------------CCcccCChhHHHHHHHHHHHcCCcccceeeeecC
Q 022982 104 KEYVEDCKQVGFDTIELN--------------VGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS--------------dGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~ 155 (289)
.+.++.++++|+++|-|- .|. -+.+.-++++++|+++||+|.-.|+..+.
T Consensus 51 ~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~--~d~~~~~~~a~~Ak~~GLkVlldfHysD~ 114 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN--NDLEKAIQIGKRATANGMKLLADFHYSDF 114 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC--CCHHHHHHHHHHHHHTTCEEEEEECSSSS
T ss_pred chHHHHHHHCCCCEEEEeeecCCcccccCccCCCC--CCHHHHHHHHHHHHHCCCEEEEEeccCCc
Confidence 355788899999999981 122 34677788999999999999998877443
No 248
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=72.69 E-value=8.6 Score=33.04 Aligned_cols=87 Identities=16% Similarity=0.176 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHcCCCEEEecC--CcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
...+..+.+.+.|.++|.|.+ |... +.... .+|+.+++. ++. +-+..
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~~~~~-~~i~~i~~~~~ip----v~v~g------------------------ 82 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG-TGDNR-ALIAEVAQAMDIK----VELSG------------------------ 82 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT-SCCCH-HHHHHHHHHCSSE----EEEES------------------------
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc-CCChH-HHHHHHHHhcCCc----EEEEC------------------------
Confidence 344555677788999999986 2210 11122 566666652 111 11110
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
++.|+ ++++..+++||+.|++=+.-+.+ .+.+.++++.+|
T Consensus 83 -gI~~~----~~~~~~l~~Gad~V~lg~~~l~~------p~~~~~~~~~~g 122 (244)
T 1vzw_A 83 -GIRDD----DTLAAALATGCTRVNLGTAALET------PEWVAKVIAEHG 122 (244)
T ss_dssp -SCCSH----HHHHHHHHTTCSEEEECHHHHHC------HHHHHHHHHHHG
T ss_pred -CcCCH----HHHHHHHHcCCCEEEECchHhhC------HHHHHHHHHHcC
Confidence 01123 34777788999999886542221 345555555555
No 249
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=72.45 E-value=52 Score=29.15 Aligned_cols=167 Identities=13% Similarity=0.049 Sum_probs=93.6
Q ss_pred CCCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccCh--------hHHHHHHHHHHhCCc-eecCC--c
Q 022982 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK--------PFIEEVVKRAHQHDV-YVSTG--D 90 (289)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~--------~~l~eKI~l~~~~gV-~v~~G--t 90 (289)
+..|++.++..|. .+...+.+++.+..|=++ -.+.|-+.-... +.+++..+++.+++- .+.-| |
T Consensus 37 ~~~GV~~~v~~~~----~~~~~~~~~~la~~~~~v-~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiG 111 (301)
T 2xio_A 37 VEIGVKKFMITGG----NLQDSKDALHLAQTNGMF-FSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECG 111 (301)
T ss_dssp HHHTEEEEEECCC----SHHHHHHHHHHHTTCTTE-EEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEE
T ss_pred HHCCCCEEEEeCC----CHHHHHHHHHHHHHCCCE-EEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEee
Confidence 4569999999987 566888888888887664 355554332221 225555666665421 11112 1
Q ss_pred ----HH--H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcc
Q 022982 91 ----WA--E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDR 163 (289)
Q Consensus 91 ----lf--E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~ 163 (289)
+. . ...++. .|...++.|+++|...+==+.. ..+ ++++.+++.+.. +..++-...+ |
T Consensus 112 Ld~~~~~~~~~~~Q~~--~f~~ql~lA~~~~lPv~iH~r~----a~~---~~~~il~~~~~~--~~~~i~H~f~--g--- 175 (301)
T 2xio_A 112 LDFDRLQFCPKDTQLK--YFEKQFELSEQTKLPMFLHCRN----SHA---EFLDITKRNRDR--CVGGVVHSFD--G--- 175 (301)
T ss_dssp EETTCTTTSCHHHHHH--HHHHTHHHHHHHCCCEEEEEES----CHH---HHHHHHHHTGGG--SSCEEETTCC--C---
T ss_pred CCCCcCCCCCHHHHHH--HHHHHHHHHHHhCCcEEEEecC----chH---HHHHHHHhccCC--CCcEEEEccC--C---
Confidence 11 1 122333 7899999999999887633321 233 455555553321 1112311110 1
Q ss_pred ccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 164 DRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
+ .+++++.++.|.+.=+ .|.+-. +.. ..++++.+|++||++|..-|
T Consensus 176 -------------------~----~~~~~~~l~~g~yi~~---~g~~~~----~~~-~~~~~~~~p~drlLleTD~P 221 (301)
T 2xio_A 176 -------------------T----KEAAAALIDLDLYIGF---NGCSLK----TEA-NLEVLKSIPSEKLMIETDAP 221 (301)
T ss_dssp -------------------C----HHHHHHHHHTTCEEEE---CGGGSS----SHH-HHHHHHTSCGGGEEECCCTT
T ss_pred -------------------C----HHHHHHHHhcCcEEEE---cccccC----ChH-HHHHHHhCChHHEEEecCCC
Confidence 1 3566777888865433 233211 122 23788899999999998765
No 250
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=72.42 E-value=6 Score=35.37 Aligned_cols=82 Identities=23% Similarity=0.290 Sum_probs=56.7
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
+.+++..|-|+|=+-.-.++ ++-.++++.+++.|+.++-|+.=
T Consensus 121 i~~a~~~GAD~VlL~~~~l~---~~l~~l~~~a~~lGl~~lvev~~---------------------------------- 163 (254)
T 1vc4_A 121 LEEARAFGASAALLIVALLG---ELTGAYLEEARRLGLEALVEVHT---------------------------------- 163 (254)
T ss_dssp HHHHHHTTCSEEEEEHHHHG---GGHHHHHHHHHHHTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEECccchH---HHHHHHHHHHHHCCCeEEEEECC----------------------------------
Confidence 56689999999999766555 67778999999988887644322
Q ss_pred HHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhcc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l 228 (289)
.+++++.+++||++|=+..+.+.+- .+.-+...++...+
T Consensus 164 -~~E~~~a~~~gad~IGvn~~~l~~~--~~dl~~~~~L~~~i 202 (254)
T 1vc4_A 164 -ERELEIALEAGAEVLGINNRDLATL--HINLETAPRLGRLA 202 (254)
T ss_dssp -HHHHHHHHHHTCSEEEEESBCTTTC--CBCTTHHHHHHHHH
T ss_pred -HHHHHHHHHcCCCEEEEccccCcCC--CCCHHHHHHHHHhC
Confidence 2345678899999999998875432 22333444444443
No 251
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=72.39 E-value=5.6 Score=38.66 Aligned_cols=126 Identities=11% Similarity=-0.005 Sum_probs=72.8
Q ss_pred HHHHHHHcCCCEEEecCCc--------------------ccCC-------hhHHHHHHHHHHHcCCcccceeeeecCCCC
Q 022982 106 YVEDCKQVGFDTIELNVGS--------------------LEIP-------EETLLRYVRLVKSAGLKAKPKFAVMFNKSD 158 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGt--------------------i~i~-------~~~r~~lI~~~~~~G~~v~~E~g~k~~~~e 158 (289)
=++++|+|||++|++|==+ -.+. .++..++|+.+.++|++|+-.+-..+-..+
T Consensus 42 ~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 42 QAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp HHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 3668899999999998322 2344 789999999999999999887755321111
Q ss_pred CCC------ccccccccc--cccCCCC-----------------ccccccHHHHHHHHHHHHH-ccCcEEEEeccccccC
Q 022982 159 IPS------DRDRAFGAY--VARAPRS-----------------TEYVEDVDLLIRRAERCLE-AGADMIMIDSDDVCKH 212 (289)
Q Consensus 159 vg~------~~d~~~~~~--~~~~~~~-----------------~~~~~~~~~~I~~~~~dLe-AGA~~ViiEarGI~d~ 212 (289)
.. ....-+-.. -.+..|. .+-..-.+.+++.++..++ .|+|=.-+.+=
T Consensus 122 -~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~f~~~~~dLn~~np~Vr~~i~~~~~~w~~~~gvDGfRlDa~----- 195 (527)
T 1gcy_A 122 -YPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFV----- 195 (527)
T ss_dssp -CSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCG-----
T ss_pred -CCCccccCCCcchhcccccCCCCCcccCcccCccccccCCccccCCHHHHHHHHHHHHHHHHhcCCCeEEEecc-----
Confidence 00 000000000 0010111 0001114677778887776 89887777664
Q ss_pred CCCccHHHHHHHHhccC-CCceEEecC
Q 022982 213 ADSLRADIIAKVIGRLG-LEKTMFEAT 238 (289)
Q Consensus 213 ~G~~r~d~v~~ii~~l~-~eklifEAP 238 (289)
..+..+.+.++.+.+. +--++=|+-
T Consensus 196 -~~i~~~f~~~~~~~~~~p~~~vgE~~ 221 (527)
T 1gcy_A 196 -RGYAPERVNSWMTDSADNSFCVGELW 221 (527)
T ss_dssp -GGSCHHHHHHHHHHHCTTSEEEECCC
T ss_pred -ccCCHHHHHHHHHHhcCCceEEEEec
Confidence 2333567777777664 334555654
No 252
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=72.25 E-value=15 Score=33.39 Aligned_cols=139 Identities=21% Similarity=0.186 Sum_probs=78.5
Q ss_pred hcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcH---HHHHHHhCCchHHHHHHHHHHcCCCEEEecC-Ccc
Q 022982 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDW---AEHLIRNGPSAFKEYVEDCKQVGFDTIELNV-GSL 125 (289)
Q Consensus 50 ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gtl---fE~a~~qg~~~~~~yl~~~k~lGF~~IEISd-Gti 125 (289)
..+|+|++|+|-++.. +.+ |.+.+.- ..-=|.+++|+. -|.. .-++.++.-|-+-|=+=. |+-
T Consensus 118 l~~~vd~~kIgs~~~~--n~~-ll~~~a~-~~kPV~lk~G~~~t~~ei~---------~Ave~i~~~Gn~~i~L~~Rg~~ 184 (276)
T 1vs1_A 118 VSRYADMLQIGARNMQ--NFP-LLREVGR-SGKPVLLKRGFGNTVEELL---------AAAEYILLEGNWQVVLVERGIR 184 (276)
T ss_dssp HHHHCSEEEECGGGTT--CHH-HHHHHHH-HTCCEEEECCTTCCHHHHH---------HHHHHHHHTTCCCEEEEECCBC
T ss_pred HHHhCCeEEECccccc--CHH-HHHHHHc-cCCeEEEcCCCCCCHHHHH---------HHHHHHHHcCCCeEEEEeCCcC
Confidence 3456899999866543 433 4444441 233345566753 3332 233345667774444433 553
Q ss_pred cCC----hhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCc
Q 022982 126 EIP----EETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD 200 (289)
Q Consensus 126 ~i~----~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~ 200 (289)
+-| ++--++.|..+++. |+. ++. +.....| + -+.....+...+.+||+
T Consensus 185 ~yp~y~~~~vdl~~i~~lk~~~~lp----Vi~-dssH~~g---~-------------------~~~~~~~~~aAva~Ga~ 237 (276)
T 1vs1_A 185 TFEPSTRFTLDVAAVAVLKEATHLP----VIV-DPSHPAG---R-------------------RSLVPALAKAGLAAGAD 237 (276)
T ss_dssp CSCCSSSSBCBHHHHHHHHHHBSSC----EEE-CCHHHHC---S-------------------GGGHHHHHHHHHHTTCS
T ss_pred CCCCcCcchhCHHHHHHHHHHhCCC----EEE-eCCCCCC---c-------------------cchHHHHHHHHHHcCCC
Confidence 332 22234556777774 443 322 1011111 1 11224445556889999
Q ss_pred EEEEecc-----ccccCCCCccHHHHHHHHhcc
Q 022982 201 MIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 201 ~ViiEar-----GI~d~~G~~r~d~v~~ii~~l 228 (289)
=||||.- -+.|..-.+..+.+.++++.+
T Consensus 238 Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i 270 (276)
T 1vs1_A 238 GLIVEVHPNPEEALSDAKQQLTPGEFARLMGEL 270 (276)
T ss_dssp EEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred EEEEEecCCcccCCCchhcCCCHHHHHHHHHHH
Confidence 9999984 567888899999999998754
No 253
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=72.04 E-value=3.3 Score=37.55 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=59.5
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
......++++..++|++++|+|.--..-+..+ -++.++++|..+..-- +..+ |+-+..|.+.+.++|.|+
T Consensus 38 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~----~v~~Lk~~g~~VflDlK~~DI-----pnTv~~a~~~~~~~gaD~ 108 (255)
T 3ldv_A 38 NLADALAFVDKIDPSTCRLKVGKEMFTLFGPD----FVRELHKRGFSVFLDLKFHDI-----PNTCSKAVKAAAELGVWM 108 (255)
T ss_dssp SHHHHHHHHTTSCGGGCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEEEEEECSC-----HHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhCCcCcEEEeCHHHHHhhCHH----HHHHHHhcCCCEEEEEecccc-----hhHHHHHHHHHHhcCCCE
Confidence 67788999999999999999997444333333 4455566676655421 2111 234566777788999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHH
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKS 141 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~ 141 (289)
|-|+- ....+....+++.+++
T Consensus 109 vTVh~---~~G~~~~~~a~~~~~~ 129 (255)
T 3ldv_A 109 VNVHA---SGGERMMAASREILEP 129 (255)
T ss_dssp EEEEG---GGCHHHHHHHHHHHGG
T ss_pred EEEec---cCCHHHHHHHHHHHhh
Confidence 99964 3345555566666654
No 254
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=72.03 E-value=8.8 Score=33.63 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=75.6
Q ss_pred hHHHHHHHhhcc---cccE-EEecCccccccChhHHHHHHHHHHhCCc----eec-CC-cHHHHHHHhCCc---------
Q 022982 41 NVLEDIFESMGQ---FVDG-LKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVS-TG-DWAEHLIRNGPS--------- 101 (289)
Q Consensus 41 ~~~~DlLe~ag~---yID~-lKfg~GTs~l~p~~~l~eKI~l~~~~gV----~v~-~G-tlfE~a~~qg~~--------- 101 (289)
..|+++|+.+.+ ++.+ +|-.... .-.++.++..+++.++++. .++ .- ..+..+-...|+
T Consensus 86 ptL~evl~~~~~~~~~l~iEiK~~~~~--~~~~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~ 163 (250)
T 3ks6_A 86 MTLEELCALYVDSHVNFRCEIKPGVDG--LPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPS 163 (250)
T ss_dssp EEHHHHHHHHTTCSCEEEEEECCCTTS--CCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHH
T ss_pred cCHHHHHHHHhccCcEEEEEeCCCccc--CcchHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecc
Confidence 378888887742 1111 4542211 1123567777888888864 222 22 234444444432
Q ss_pred -----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCC
Q 022982 102 -----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (289)
Q Consensus 102 -----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~ 176 (289)
.++++.+.++.+|++.+-.+...+ + .++|+.++++|++|.+ .++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~v~~~~~~G~~V~~-WTvn----------------------- 213 (250)
T 3ks6_A 164 VLQQLGPGAVIETAIAHSIHEIGVHIDTA--D----AGLMAQVQAAGLDFGC-WAAH----------------------- 213 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEGGGC--C----HHHHHHHHHTTCEEEE-ECCC-----------------------
T ss_pred cccccchhHHHHHHHhcCCCEEecchhhC--C----HHHHHHHHHCCCEEEE-EeCC-----------------------
Confidence 245677889999999887765433 2 4789999999988655 2331
Q ss_pred CccccccHHHHHHHHHHHHHccCcEEEEe
Q 022982 177 STEYVEDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 177 ~~~~~~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
+ .+.+++.++.|+|.||..
T Consensus 214 ------~----~~~~~~l~~~GVDgIiTD 232 (250)
T 3ks6_A 214 ------T----PSQITKALDLGVKVFTTD 232 (250)
T ss_dssp ------S----HHHHHHHHHHTCSEEEES
T ss_pred ------C----HHHHHHHHHcCCCEEEcC
Confidence 1 256778889999999976
No 255
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=71.95 E-value=15 Score=34.03 Aligned_cols=150 Identities=10% Similarity=0.082 Sum_probs=96.8
Q ss_pred hHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHH--HcCCCE
Q 022982 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCK--QVGFDT 117 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k--~lGF~~ 117 (289)
..++++......-||.+-+.+ .+..-+...+-++.++++|+.|... -.+ .+....+.|++.++ +.|.+.
T Consensus 88 ~dv~~~~~a~~~Gvd~~ri~~---~~~nle~~~~~v~~ak~~G~~v~~~~~~~-----~~~~~~~~~l~~~~~~~~G~~~ 159 (320)
T 3dxi_A 88 EDLNHLLLPIIGLVDMIRIAI---DPQNIDRAIVLAKAIKTMGFEVGFNVMYM-----SKWAEMNGFLSKLKAIDKIADL 159 (320)
T ss_dssp GGHHHHHGGGTTTCSEEEEEE---CGGGHHHHHHHHHHHHTTTCEEEEEECCT-----TTGGGSTTSGGGGGGGTTTCSE
T ss_pred hhHHHHHHhhhcCCCEEEEEe---cHHHHHHHHHHHHHHHHCCCEEEEEEEeC-----CCCCCHHHHHHHHHHhhCCCCE
Confidence 356676666668899987765 2222345667777799999876532 111 10001113444443 469999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHc
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEA 197 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeA 197 (289)
|-|.|-+--+.+++-.++|+.+++. +. ..++..+. . | ...-+-.+...++|
T Consensus 160 i~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~H-n------~-------------------~G~a~an~laA~~a 210 (320)
T 3dxi_A 160 FCMVDSFGGITPKEVKNLLKEVRKY-TH--VPVGFHGH-D------N-------------------LQLGLINSITAIDD 210 (320)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHH-CC--SCEEEECB-C------T-------------------TSCHHHHHHHHHHT
T ss_pred EEECcccCCCCHHHHHHHHHHHHHh-CC--CeEEEEeC-C------C-------------------CccHHHHHHHHHHh
Confidence 9999999889999999999999985 22 23555331 1 1 11225667778999
Q ss_pred cCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 198 GADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 198 GA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
||+.|=.=-.|+=...||.-++.+-..++.
T Consensus 211 Ga~~vd~si~GlG~~~GN~~~E~lv~~L~~ 240 (320)
T 3dxi_A 211 GIDFIDATITGMGRGAGNLKMELLLTYLNK 240 (320)
T ss_dssp TCSEEEEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred CCCEEEEeccccCCcccchhHHHHHHHHHh
Confidence 999553322488888999998877766653
No 256
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=71.90 E-value=3.8 Score=41.58 Aligned_cols=52 Identities=19% Similarity=0.405 Sum_probs=40.6
Q ss_pred CchHHHHHHHHHHcCCCEEEec---------CCcccCCh-hHHHHHHHHHHHcCCcccceee
Q 022982 100 PSAFKEYVEDCKQVGFDTIELN---------VGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEIS---------dGti~i~~-~~r~~lI~~~~~~G~~v~~E~g 151 (289)
++..++-++.+|++||++|.++ .|..+.+- ++-.++|+.++++||+|+-+.+
T Consensus 36 ~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 36 KEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 4588889999999999999997 45554443 2334679999999999998876
No 257
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=71.67 E-value=10 Score=33.18 Aligned_cols=94 Identities=22% Similarity=0.231 Sum_probs=59.9
Q ss_pred HHHHHHHHcCCCEE--EecCCcccCChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 105 EYVEDCKQVGFDTI--ELNVGSLEIPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 105 ~yl~~~k~lGF~~I--EISdGti~i~~~~----r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
+-++.+.+.|++.| -+..|+. +.++ -.++++.+++.|..+..|.+. ++. . + +..+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~~~-~G~-~------------l-~~~~-- 163 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMMYP-RGK-H------------I-QNER-- 163 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETST--THHHHHHHHHHHHHHHHHHTCCEEEEEEE-CST-T------------C-SCTT--
T ss_pred HHHHHHHHcCCCEEEEEEecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEeCC-CCc-c------------c-CCCC--
Confidence 44667888999999 7778865 4443 335666677779998887643 111 1 0 1112
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
+++...+.++...++|||+|.+-- ....+.+.++.+.++
T Consensus 164 ----~~~~~~~~a~~a~~~Gad~i~~~~--------~~~~~~l~~i~~~~~ 202 (273)
T 2qjg_A 164 ----DPELVAHAARLGAELGADIVKTSY--------TGDIDSFRDVVKGCP 202 (273)
T ss_dssp ----CHHHHHHHHHHHHHTTCSEEEECC--------CSSHHHHHHHHHHCS
T ss_pred ----CHhHHHHHHHHHHHcCCCEEEECC--------CCCHHHHHHHHHhCC
Confidence 244444444888899999999862 134677777776664
No 258
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*
Probab=71.49 E-value=4.6 Score=41.35 Aligned_cols=85 Identities=18% Similarity=0.335 Sum_probs=53.7
Q ss_pred ccccEEEecCccccccChhHHHHHHHHHHhCCceecC--------C-c---HHHHHHHhCC----chHHHHHHHHHHcCC
Q 022982 52 QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--------G-D---WAEHLIRNGP----SAFKEYVEDCKQVGF 115 (289)
Q Consensus 52 ~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~--------G-t---lfE~a~~qg~----~~~~~yl~~~k~lGF 115 (289)
+|||+.=. | +-+.|. ..-|+.||+|||+|.. | + |++-++.++. .-+++.++.|+.+||
T Consensus 89 ~yvD~fvy-f--h~l~P~---~~widaAHrnGV~VlGT~~fe~~~~~~~~~~~~~lL~~~~~~~~~~a~kLv~la~~yGF 162 (653)
T 2w91_A 89 QYLDSMVF-W--EGLVPT---PDVIDAGHRNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGY 162 (653)
T ss_dssp GGCSEEEE-T--TCSSCC---HHHHHHHHHTTCCEEEEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHHHHTC
T ss_pred cccceeec-c--cccCCC---cHHHHHHHHCCCEEEEEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhCC
Confidence 68886542 5 445553 3679999999998872 1 1 5556664432 237999999999999
Q ss_pred CEEEecCCcc-cCChh---HHHHHHHHHHHc
Q 022982 116 DTIELNVGSL-EIPEE---TLLRYVRLVKSA 142 (289)
Q Consensus 116 ~~IEISdGti-~i~~~---~r~~lI~~~~~~ 142 (289)
|.+=|+-=+- .++.+ ....+++.+++.
T Consensus 163 DGw~IN~E~~~~~~~~~~~~l~~F~~~L~~~ 193 (653)
T 2w91_A 163 DGYFINQETTGDLVKPLGEKMRQFMLYSKEY 193 (653)
T ss_dssp CEEEEEEEECSTTTGGGHHHHHHHHHHHHHH
T ss_pred CceEEeecccCCCCHHHHHHHHHHHHHHHHH
Confidence 9876654431 14333 334455555553
No 259
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=71.44 E-value=21 Score=32.33 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=67.3
Q ss_pred hhHHHHHHHHHHhC--Cce-ec---C---CcHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHHHH
Q 022982 69 KPFIEEVVKRAHQH--DVY-VS---T---GDWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYVRL 138 (289)
Q Consensus 69 ~~~l~eKI~l~~~~--gV~-v~---~---GtlfE~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI~~ 138 (289)
.+.+.+.+...+++ +++ ++ + ||-++.- . +..-++++.+-++| +++|.|- +..+++...++++.
T Consensus 82 ~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~--~--~~~~~ll~~~l~~g~~dyIDvE---l~~~~~~~~~l~~~ 154 (276)
T 3o1n_A 82 AESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALT--T--GQYIDLNRAAVDSGLVDMIDLE---LFTGDDEVKATVGY 154 (276)
T ss_dssp HHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCC--H--HHHHHHHHHHHHHTCCSEEEEE---GGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCC--H--HHHHHHHHHHHhcCCCCEEEEE---CcCCHHHHHHHHHH
Confidence 35688888888775 443 22 1 5543311 1 13445666667789 8998875 45677888899999
Q ss_pred HHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 139 VKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 139 ~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
+++.|-+++--..- ...++ +.+++++..++..+.|||.|=+
T Consensus 155 a~~~~~kvI~S~Hd---f~~tP----------------------~~~el~~~~~~~~~~GaDIvKi 195 (276)
T 3o1n_A 155 AHQHNVAVIMSNHD---FHKTP----------------------AAEEIVQRLRKMQELGADIPKI 195 (276)
T ss_dssp HHHTTCEEEEEEEE---SSCCC----------------------CHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHhCCCEEEEEeec---CCCCc----------------------CHHHHHHHHHHHHHcCCCEEEE
Confidence 99988776543332 11111 3567888899999999986644
No 260
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=71.34 E-value=8 Score=34.88 Aligned_cols=138 Identities=11% Similarity=0.104 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
.+.++++++-+- .+.|=+.-. +..|+.++|.++++.+.+ ...|+ .|+ .+
T Consensus 20 ~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvi--aGv---g~--------------------- 71 (283)
T 2pcq_A 20 AFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFL--VGL---ME--------------------- 71 (283)
T ss_dssp HHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCE--EEE---CC---------------------
T ss_pred HHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEE--EeC---CC---------------------
Confidence 566777777777 777665433 347899999999998877 22222 444 11
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEecc---------c---------------cccC---CC-CccHHHHHHHHhccCC
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSD---------D---------------VCKH---AD-SLRADIIAKVIGRLGL 230 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEar---------G---------------I~d~---~G-~~r~d~v~~ii~~l~~ 230 (289)
.+..+.|++++..-++|||.|++=.- | ||+. .| ++..+.+.++++ .
T Consensus 72 ---~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~~lPiilYn~P~~tg~~l~~~~~~~La~---~ 145 (283)
T 2pcq_A 72 ---ETLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAEKMPLFLYHVPQNTKVDLPLEAVEALAP---H 145 (283)
T ss_dssp ---SSHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHHHSCEEEEECHHHHCCCCCHHHHHHHTT---S
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHhc---C
Confidence 13677788888888899999888442 1 3442 12 466677777753 3
Q ss_pred CceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022982 231 EKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 275 (289)
Q Consensus 231 eklif--EA-P~k~qQ~~~I~~fG~~VNLgI~~~eVl~LE~LR~g~~G 275 (289)
.+|+- |+ .+-.+...+++ .+++..+. .-+|-+.+++|..|--|
T Consensus 146 pnivgiKdssgd~~~~~~~~~-~~~~f~v~-~G~d~~~~~~l~~G~~G 191 (283)
T 2pcq_A 146 PNVLGIKDSSGDLSRIAFYQA-RLQEFRVY-TGHAPTFLGALALGAEG 191 (283)
T ss_dssp TTEEEEEECSCCHHHHHHHHH-HCSSCEEE-ECCGGGHHHHHHTTCCE
T ss_pred CCEEEEEECCCCHHHHHHHHh-cCCCEEEE-ECcHHHHHHHHHcCCCE
Confidence 44543 44 35555666666 77665553 23344567788766443
No 261
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=71.32 E-value=4.7 Score=38.22 Aligned_cols=51 Identities=12% Similarity=0.194 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHcCCCEEEecC------------Cc----ccC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 102 AFKEYVEDCKQVGFDTIELNV------------GS----LEI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd------------Gt----i~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-.++.++++++|||++|+++= |. -.+ +.++..++|+.+.++|++|+-.+-.
T Consensus 16 i~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 444566788999999999972 22 223 2578999999999999999876644
No 262
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=71.30 E-value=3.2 Score=36.68 Aligned_cols=95 Identities=12% Similarity=0.041 Sum_probs=64.5
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
.+....++++.+|+|+|++|++..-..-+..+. |+.++++|..+..-- + .-.|+.+..|++.+.++|.|+
T Consensus 15 ~l~~~~~~v~~~~~~v~~~Kv~~d~~~~~G~~~----v~~lr~~~~~v~lD~kl-----~Dip~t~~~~~~~~~~~Gad~ 85 (246)
T 2yyu_A 15 SKQEVERFLRPFAGTPLFVKVGMELYYQEGPAI----VAFLKEQGHAVFLDLKL-----HDIPNTVKQAMKGLARVGADL 85 (246)
T ss_dssp SHHHHHHHHGGGTTSCCEEEECHHHHHHHTHHH----HHHHHHTTCEEEEEEEE-----CSCHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhcccccEEEeCHHHHHHhCHHH----HHHHHHCCCeEEEEeec-----ccchHHHHHHHHHHHhcCCCE
Confidence 455777888999999999999987654444443 444566655444321 2 122446677999999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHH---cCCc
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKS---AGLK 145 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~---~G~~ 145 (289)
|-|+-- ...+...++++.+++ .|.+
T Consensus 86 vTvH~~---~g~~~l~~~~~~~~~~~~~G~~ 113 (246)
T 2yyu_A 86 VNVHAA---GGRRMMEAAIEGLDAGTPSGRM 113 (246)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHHHSCSSSC
T ss_pred EEEECC---CCHHHHHHHHHHHHhhcccCCc
Confidence 999853 344544578888887 6654
No 263
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=71.09 E-value=29 Score=33.74 Aligned_cols=55 Identities=25% Similarity=0.262 Sum_probs=31.5
Q ss_pred ccEEEecCccccccChhHHHHHHHHHHh-C-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022982 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQ-H-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~-~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (289)
+|++-+... .-.++. +.+.|+-.++ + ++++..|+- .-.+..+.+.+.|.|+|-|+
T Consensus 242 ~d~I~id~a--~g~~~~-~~~~v~~i~~~~p~~~Vi~g~v----------~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 242 VDVVVVDTA--HGHSKG-VIERVRWVKQTFPDVQVIGGNI----------ATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp CSEEEEECS--CCSBHH-HHHHHHHHHHHCTTSEEEEEEE----------CSHHHHHHHHHTTCSEEEEC
T ss_pred cceEEeccc--CCcchh-HHHHHHHHHHHCCCceEEEeee----------CcHHHHHHHHHcCCCEEEEC
Confidence 677766532 233433 4455555544 3 666665520 11233466788999999985
No 264
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=70.97 E-value=27 Score=32.64 Aligned_cols=25 Identities=8% Similarity=-0.144 Sum_probs=20.9
Q ss_pred cHHHHHHHHHHHHHccCcEEEEecc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
+.++.++.++..-++|+++|-+=++
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4677888888888999999988665
No 265
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=70.95 E-value=4.6 Score=38.08 Aligned_cols=130 Identities=15% Similarity=0.014 Sum_probs=70.7
Q ss_pred HHHHHHcCCCEEEecCC---------------cccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCC--
Q 022982 107 VEDCKQVGFDTIELNVG---------------SLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI-- 159 (289)
Q Consensus 107 l~~~k~lGF~~IEISdG---------------ti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~ev-- 159 (289)
+++++++||++|.+|-= .-.. +.++..++|+.+.++|++|.-.+-...-..+-
T Consensus 36 l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~~~~~ 115 (449)
T 3dhu_A 36 LQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHTSPDSVL 115 (449)
T ss_dssp HHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEECTTSHH
T ss_pred HHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcCcCccch
Confidence 56789999999999842 2211 24889999999999999998877442211100
Q ss_pred ----C----CccccccccccccCCCCc------cccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHH
Q 022982 160 ----P----SDRDRAFGAYVARAPRST------EYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVI 225 (289)
Q Consensus 160 ----g----~~~d~~~~~~~~~~~~~~------~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii 225 (289)
+ ...+..+. -....|.. +-..-.+.+++.++..++. +|=.-+. ....+..+.+.++.
T Consensus 116 ~~~~~~~~~~~~~~~~~--~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~-vDGfRlD------aa~~~~~~f~~~~~ 186 (449)
T 3dhu_A 116 ATEHPEWFYHDADGQLT--NKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF-VDGYRCD------VAPLVPLDFWLEAR 186 (449)
T ss_dssp HHHCGGGBCBCTTSCBC--CSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT-CSEEEET------TGGGSCHHHHHHHH
T ss_pred hhcCccceEECCCCCcC--CCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh-CCEEEEE------ChhhCCHHHHHHHH
Confidence 0 00000000 00011211 0011135677788888876 5555444 44445566666665
Q ss_pred hcc---CCCce-EEecCCchhHHH
Q 022982 226 GRL---GLEKT-MFEATNPRTSEW 245 (289)
Q Consensus 226 ~~l---~~ekl-ifEAP~k~qQ~~ 245 (289)
+.+ .++-+ +=|.-.+....+
T Consensus 187 ~~~~~~~p~~~~~gE~~~~~~~~~ 210 (449)
T 3dhu_A 187 KQVNAKYPETLWLAESAGSGFIEE 210 (449)
T ss_dssp HHHHHHSTTCEEEECCCCHHHHHH
T ss_pred HHHHhhCCCeEEEeccCCchHHHH
Confidence 443 45554 446665544333
No 266
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=70.92 E-value=13 Score=32.64 Aligned_cols=108 Identities=9% Similarity=0.095 Sum_probs=63.0
Q ss_pred HHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-------HH---HHHHHhCCchHHHHHHHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDC 110 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-------lf---E~a~~qg~~~~~~yl~~~ 110 (289)
.+++ ++.+.+. +|.+=+......-..+..+++..+++.++|+.+...+ +. +....+.-+.+++.++.|
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 116 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNV 116 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444 5544433 6666665443222333568888999999999765422 21 111111112689999999
Q ss_pred HHcCCCEEEecC----Cccc--C-C-hhHH-------HHHHHHHHHcCCccccee
Q 022982 111 KQVGFDTIELNV----GSLE--I-P-EETL-------LRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 111 k~lGF~~IEISd----Gti~--i-~-~~~r-------~~lI~~~~~~G~~v~~E~ 150 (289)
+++|.+.|=+.- |... . + .+.+ .++.+.+++.|.++.-|-
T Consensus 117 ~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 171 (309)
T 2hk0_A 117 AKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEV 171 (309)
T ss_dssp HHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 999999997653 5431 1 2 2222 345566677788755554
No 267
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=70.86 E-value=3.9 Score=36.86 Aligned_cols=69 Identities=20% Similarity=0.255 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhCCc-eec--CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc
Q 022982 71 FIEEVVKRAHQHDV-YVS--TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (289)
Q Consensus 71 ~l~eKI~l~~~~gV-~v~--~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v 146 (289)
.+++-|+..++.|- .|- |+..- .+....++.++...+.|+++|||+.+... .+....+.+.+++.|+.+
T Consensus 172 ~~~~~i~~i~~~Gg~~VlAHP~r~~-----~~~~~~~~~l~~l~~~g~~giEv~~~~~~--~~~~~~~~~~a~~~gl~~ 243 (292)
T 2yb1_A 172 SLEDAVGWIVGAGGMAVIAHPGRYD-----MGRTLIERLILDFQAAGGQGIEVASGSHS--LDDMHKFALHADRHGLYA 243 (292)
T ss_dssp CHHHHHHHHHHTTCEEEECCGGGSS-----CCHHHHHHHHHHHHHTTCCEEEEEETTCC--HHHHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHcCCEEEEECcCccc-----cchhhHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHHHHHHHHHcCCce
Confidence 47889999998774 333 34210 01012567777788899999999999875 556678889999998875
No 268
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=70.74 E-value=4.2 Score=38.82 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=35.5
Q ss_pred HHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+++++|||++|.++- |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 62 LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 62 LDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp HHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677999999999973 211 11 2578999999999999999877744
No 269
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=70.55 E-value=4.6 Score=37.82 Aligned_cols=46 Identities=20% Similarity=0.337 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecC--------C-----cccCC------hhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNV--------G-----SLEIP------EETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------G-----ti~i~------~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
++++++|||++|+++= | ...+. .++..++|+.+.++|++|+-.+-.
T Consensus 27 ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 27 VDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp HHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5677999999999872 2 12333 578999999999999999877644
No 270
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=70.45 E-value=38 Score=31.07 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=0.0
Q ss_pred chhHHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 39 SHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 39 g~~~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
+...+.+.++...++ +|++=+-||.-.-.....+.--..+. ++|+.+.+= |--- .+...+++.+..++++|++
T Consensus 27 ~~~~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~-~~g~~~i~Hltc~~----~~~~~l~~~L~~~~~~GI~ 101 (310)
T 3apt_A 27 GEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQ-SLGLNPLAHLTVAG----QSRKEVAEVLHRFVESGVE 101 (310)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHH-HTTCCBCEEEECTT----SCHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHH-HhCCCeEEEeecCC----CCHHHHHHHHHHHHHCCCC
Q ss_pred EEEecCCcccCC----------hhHHHHHHHHHHHc-C--CcccceeeeecCCCCCCCccccccccccccCCCCcccccc
Q 022982 117 TIELNVGSLEIP----------EETLLRYVRLVKSA-G--LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (289)
Q Consensus 117 ~IEISdGti~i~----------~~~r~~lI~~~~~~-G--~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~ 183 (289)
.|=+=.|-..-+ .+.=.+||+.+++. | |. +|+ +-++..-....+
T Consensus 102 niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~----igv-------------------A~yPE~Hp~~~~ 158 (310)
T 3apt_A 102 NLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVS----VGG-------------------AAYPEGHPESES 158 (310)
T ss_dssp EEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSE----EEE-------------------EECTTCCTTSSC
T ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeE----EEE-------------------EeCCCcCCCCCC
Q ss_pred HHHHHHHHHHHHHccCcEEEE
Q 022982 184 VDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 184 ~~~~I~~~~~dLeAGA~~Vii 204 (289)
.+.-++..++-++|||+++|.
T Consensus 159 ~~~d~~~Lk~Kv~aGAdf~iT 179 (310)
T 3apt_A 159 LEADLRHFKAKVEAGLDFAIT 179 (310)
T ss_dssp HHHHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEe
No 271
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=70.44 E-value=22 Score=38.45 Aligned_cols=164 Identities=12% Similarity=0.118 Sum_probs=105.7
Q ss_pred CCCCCCCchhHHHHHHHhh-cccccEEEecCccccccChhHHHHHHHHHHhCCceec-----CCcHH--HHHHHhCCchH
Q 022982 32 PHYTLSSSHNVLEDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWA--EHLIRNGPSAF 103 (289)
Q Consensus 32 kGl~~~~g~~~~~DlLe~a-g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~-----~Gtlf--E~a~~qg~~~~ 103 (289)
.||... ..+-.+..++.| ..-||.+-+...++-+. ..+.-++..++.|-.+. +|+.+ |.+-..+++.+
T Consensus 619 vgy~~~-pd~v~~~~v~~a~~~Gvd~irif~~~sd~~---~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~ 694 (1150)
T 3hbl_A 619 VGYKNY-PDNVIHKFVQESAKAGIDVFRIFDSLNWVD---QMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYY 694 (1150)
T ss_dssp TCSSCC-CHHHHHHHHHHHHHTTCCEEEEECTTCCGG---GGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHH
T ss_pred cccccC-CchhHHHHHHHHHhCCcCEEEEEeeCCHHH---HHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHH
Confidence 345444 344444444443 44599999988777665 46667777888885432 24321 11111222345
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED 183 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~ 183 (289)
-+..+.+.+.|.+.|-|.|-.--+.+.+-.++|+.++++ +. -.++..+ ..+
T Consensus 695 ~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~-Hnt------------------------- 745 (1150)
T 3hbl_A 695 VKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSA-VD--LPIHLHT-HDT------------------------- 745 (1150)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHH-CC--SCEEEEE-CBT-------------------------
T ss_pred HHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHh-cC--CeEEEEe-CCC-------------------------
Confidence 666777788999999999999999999999999999986 32 2344433 111
Q ss_pred HHHHHHHHHHHHHccCcEEEEec--cccccCCCCccHHHHHHHHhccCC
Q 022982 184 VDLLIRRAERCLEAGADMIMIDS--DDVCKHADSLRADIIAKVIGRLGL 230 (289)
Q Consensus 184 ~~~~I~~~~~dLeAGA~~ViiEa--rGI~d~~G~~r~d~v~~ii~~l~~ 230 (289)
...-+-.+...++|||+. |++ .|+=...|+...+.+-..++..+.
T Consensus 746 ~G~a~An~laA~~aGa~~--vD~ai~GlG~~~gn~~lE~lv~~L~~~g~ 792 (1150)
T 3hbl_A 746 SGNGLLTYKQAIDAGVDI--IDTAVASMSGLTSQPSANSLYYALNGFPR 792 (1150)
T ss_dssp TSCHHHHHHHHHHTTCSE--EEEBCGGGCSBTSCCBHHHHHHHTTTSSC
T ss_pred CcHHHHHHHHHHHhCCCE--EEEeccccCCCCCCccHHHHHHHHHhcCC
Confidence 122367778899999996 565 488777888777666655555443
No 272
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=70.26 E-value=19 Score=33.88 Aligned_cols=82 Identities=23% Similarity=0.284 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHcC--CCEEEecCCcccC-------ChhHHHHHHHHHHHc--CCc--ccceeeeecCCCCCCCccccccc
Q 022982 102 AFKEYVEDCKQVG--FDTIELNVGSLEI-------PEETLLRYVRLVKSA--GLK--AKPKFAVMFNKSDIPSDRDRAFG 168 (289)
Q Consensus 102 ~~~~yl~~~k~lG--F~~IEISdGti~i-------~~~~r~~lI~~~~~~--G~~--v~~E~g~k~~~~evg~~~d~~~~ 168 (289)
..++|.+.++.++ .|+|||+-++=.. .++.-.++++.+++. -+. +..=+.+|-.
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~------------- 228 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA------------- 228 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-------------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeC-------------
Confidence 7889998888887 8999999776432 234445677766542 110 1112455531
Q ss_pred cccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
|. + |.+++.+.++...++|||.|++=.+
T Consensus 229 ----p~-~------~~~~~~~ia~~~~~aGadgi~v~nt 256 (367)
T 3zwt_A 229 ----PD-L------TSQDKEDIASVVKELGIDGLIVTNT 256 (367)
T ss_dssp ----SC-C------CHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred ----CC-C------CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 11 1 3567788889999999999998765
No 273
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=70.23 E-value=6.7 Score=33.32 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=64.5
Q ss_pred HHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecC-C--cHH----HHHHHhCCchHHHHHHHHHHc
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWA----EHLIRNGPSAFKEYVEDCKQV 113 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-G--tlf----E~a~~qg~~~~~~yl~~~k~l 113 (289)
.+++.++.+.+. .|.+=+.... +. ...+++.-++++++|+.+.. . ..+ +....+.-+.+++.++.|+.+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~--~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~l 95 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRDQ--VA-AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAEL 95 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHHH--HH-HHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecccc--cc-ccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555544 5666664321 22 34588888999999997763 2 111 111111112689999999999
Q ss_pred CCCEEEecCCccc---CCh--------hHHHHHHHHHHHcCCcccce
Q 022982 114 GFDTIELNVGSLE---IPE--------ETLLRYVRLVKSAGLKAKPK 149 (289)
Q Consensus 114 GF~~IEISdGti~---i~~--------~~r~~lI~~~~~~G~~v~~E 149 (289)
|.+.|=+..|... .+. +...++.+.+++.|+++.-|
T Consensus 96 G~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 96 GADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp TCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999887654 222 22345556677778875555
No 274
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=70.02 E-value=2.5 Score=37.15 Aligned_cols=95 Identities=8% Similarity=0.045 Sum_probs=64.3
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
.+....++++..|+|+|++|++..-..-+..+.++ .++++|..+..-- + .-.|+.+..|++.+.++|.|+
T Consensus 14 ~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~----~l~~~~~~v~lD~kl-----~Dip~t~~~~~~~~~~~Gad~ 84 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVK----QLKERNCELFLDLKL-----HDIPTTVNKAMKRLASLGVDL 84 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHH----HHHHTTCEEEEEEEE-----CSCHHHHHHHHHHHHTTTCSE
T ss_pred CHHHHHHHHHHhcccCcEEEECHHHHHHhCHHHHH----HHHHCCCcEEEEecc-----ccchHHHHHHHHHHHhcCCCE
Confidence 45567788888999999999998776555544443 3455555444321 2 122345667999999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHc---CCc
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKSA---GLK 145 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~---G~~ 145 (289)
|-|+-- ...+...++++.+++. |.+
T Consensus 85 vtvH~~---~g~~~l~~~~~~~~~~~~~g~~ 112 (239)
T 1dbt_A 85 VNVHAA---GGKKMMQAALEGLEEGTPAGKK 112 (239)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHHHSCTTSC
T ss_pred EEEeCc---CCHHHHHHHHHHHHhhhccCCC
Confidence 999853 2344445788888876 654
No 275
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=69.96 E-value=37 Score=29.75 Aligned_cols=107 Identities=12% Similarity=0.197 Sum_probs=62.7
Q ss_pred HHHHHHHhhcccccEEEecCccccc------cChhHHHHHHHHHHhCCceecC-CcHH-H--------------------
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSL------MPKPFIEEVVKRAHQHDVYVST-GDWA-E-------------------- 93 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l------~p~~~l~eKI~l~~~~gV~v~~-Gtlf-E-------------------- 93 (289)
..=+.+..+| +|.+=+......+ ..++.+++.-++++++|+.++. ++.+ .
T Consensus 19 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l 96 (340)
T 2zds_A 19 EVCRLARDFG--YDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARI 96 (340)
T ss_dssp HHHHHHHHHT--CSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHH
T ss_pred HHHHHHHHcC--CCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccccc
Confidence 3334444445 6666665321111 1234588889999999998753 3221 1
Q ss_pred -------HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC------C-------hhHHH-------HHHHHHHHcCCcc
Q 022982 94 -------HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI------P-------EETLL-------RYVRLVKSAGLKA 146 (289)
Q Consensus 94 -------~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i------~-------~~~r~-------~lI~~~~~~G~~v 146 (289)
....+.-+.+++.++.|+++|.+.|-+..|...- + .+.+. ++.+.+++.|.++
T Consensus 97 ~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l 176 (340)
T 2zds_A 97 WGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRF 176 (340)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 1011111268889999999999999998776531 1 22222 3445677778876
Q ss_pred ccee
Q 022982 147 KPKF 150 (289)
Q Consensus 147 ~~E~ 150 (289)
.-|-
T Consensus 177 ~lEn 180 (340)
T 2zds_A 177 AHEV 180 (340)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5554
No 276
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=69.96 E-value=11 Score=36.32 Aligned_cols=26 Identities=12% Similarity=0.177 Sum_probs=21.6
Q ss_pred cHHHHHHHHHHHHH-ccCcEEEEeccc
Q 022982 183 DVDLLIRRAERCLE-AGADMIMIDSDD 208 (289)
Q Consensus 183 ~~~~~I~~~~~dLe-AGA~~ViiEarG 208 (289)
+.++.++.++..-+ +|+|+|-|=+++
T Consensus 262 ~~ed~~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 262 TIDEFNQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp CHHHHHHHHHHHHHHSCCCCEEECCTT
T ss_pred CHHHHHHHHHHHHhhcCCcEEEEeeCC
Confidence 47788888888888 999999987754
No 277
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=69.80 E-value=3.3 Score=42.03 Aligned_cols=23 Identities=13% Similarity=0.154 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHcCCcccceeee
Q 022982 130 ETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 130 ~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
++..++|+.+.++|++|+-.+-.
T Consensus 379 ~efk~LV~~aH~~GIkVIlDvV~ 401 (884)
T 4aio_A 379 IEYRQMVQALNRIGLRVVMDVVY 401 (884)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCceeeeecc
Confidence 45889999999999999877755
No 278
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=69.70 E-value=3.5 Score=38.50 Aligned_cols=47 Identities=23% Similarity=0.212 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-----CC--hhHHHHHHHHHHHcCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE-----IP--EETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-----i~--~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+.+.++.++++||+.||+....+. ++ .+...++-+.+++.|+++..
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPM 87 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEE
Confidence 3788899999999999999863221 11 34566778888899998653
No 279
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=69.68 E-value=8.2 Score=33.64 Aligned_cols=146 Identities=12% Similarity=0.132 Sum_probs=82.3
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecC------C-cHHHHHHHhCCchHHHHHHHHH
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------G-DWAEHLIRNGPSAFKEYVEDCK 111 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~------G-tlfE~a~~qg~~~~~~yl~~~k 111 (289)
+...++.+.+.+-+| |+++..++| ..++.-.+.++ ++.+++ | ..++. +. ...+.+.
T Consensus 18 t~~~i~~l~~~a~~~------g~~~v~v~~-~~v~~~~~~l~--~v~v~~v~~~P~g~~~~~~-------k~-~~~~~A~ 80 (225)
T 1mzh_A 18 SEKEIEEFVLKSEEL------GIYAVCVNP-YHVKLASSIAK--KVKVCCVIGFPLGLNKTSV-------KV-KEAVEAV 80 (225)
T ss_dssp CHHHHHHHHHHHHHT------TCSEEEECG-GGHHHHHHHCS--SSEEEEEESTTTCCSCHHH-------HH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHh------CCeEEEECH-HHHHHHHHHhc--CCceeeEecCCCCccchhh-------hH-HHHHHHH
Confidence 667888888877766 555544555 44655444443 676653 2 12221 11 2346777
Q ss_pred HcCCCEEE--ecCCccc-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHH
Q 022982 112 QVGFDTIE--LNVGSLE-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLI 188 (289)
Q Consensus 112 ~lGF~~IE--ISdGti~-i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I 188 (289)
+.|+|.|+ ++-|... -..+...+.|+.+++.-= | +.+|- .-+ ++ .| |.++++
T Consensus 81 ~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~---p-v~vKv-i~e-------------~~-~l------~~~~~~ 135 (225)
T 1mzh_A 81 RDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP---S-AVHKV-IVE-------------TP-YL------NEEEIK 135 (225)
T ss_dssp HTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT---T-SEEEE-ECC-------------GG-GC------CHHHHH
T ss_pred HcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc---C-ceEEE-EEe-------------CC-CC------CHHHHH
Confidence 89999999 3444421 123444556777776421 2 23432 000 00 12 467788
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 189 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
+.++...++|||.|-+-. |.+ .|....+.+..+.+.++
T Consensus 136 ~~a~~a~eaGad~I~tst-g~~--~gga~~~~i~~v~~~v~ 173 (225)
T 1mzh_A 136 KAVEICIEAGADFIKTST-GFA--PRGTTLEEVRLIKSSAK 173 (225)
T ss_dssp HHHHHHHHHTCSEEECCC-SCS--SSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEECC-CCC--CCCCCHHHHHHHHHHhC
Confidence 999999999999994322 442 23345666776665553
No 280
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=69.62 E-value=26 Score=33.95 Aligned_cols=84 Identities=21% Similarity=0.205 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHcC--CCEEEecCCcccC-------ChhHHHHHHHHHHHc--------CC----------cccceeeeec
Q 022982 102 AFKEYVEDCKQVG--FDTIELNVGSLEI-------PEETLLRYVRLVKSA--------GL----------KAKPKFAVMF 154 (289)
Q Consensus 102 ~~~~yl~~~k~lG--F~~IEISdGti~i-------~~~~r~~lI~~~~~~--------G~----------~v~~E~g~k~ 154 (289)
..++|.+-++.+. .|+|||+-++=.. ..+...++++.+++. ++ +-+|=+.+|-
T Consensus 197 ~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi 276 (415)
T 3i65_A 197 IVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKL 276 (415)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEE
T ss_pred cHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEe
Confidence 6788887777665 8999999776432 334455677776663 10 1233244443
Q ss_pred CCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecccc
Q 022982 155 NKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDV 209 (289)
Q Consensus 155 ~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI 209 (289)
. |. | +.+++.+.++...++|||.|++-.+..
T Consensus 277 ~-----------------pd-~------~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 277 A-----------------PD-L------NQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp C-----------------SC-C------CHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred c-----------------CC-C------CHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 1 11 2 356788999999999999999988643
No 281
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=69.57 E-value=7.8 Score=33.24 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=60.4
Q ss_pred HHHHHHHhhccc-ccEEEecCcc------ccccChhHHHHHHHHHHhCCc-eecC-CcHH------HHHHHhCCchHHHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGS------HSLMPKPFIEEVVKRAHQHDV-YVST-GDWA------EHLIRNGPSAFKEY 106 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GT------s~l~p~~~l~eKI~l~~~~gV-~v~~-Gtlf------E~a~~qg~~~~~~y 106 (289)
.+++.++.+.++ +|.+=+ |.. ....+++.+++.-++++++|+ .++. +.++ +....+.-+.+.+.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~ 93 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADD 93 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHH
Confidence 455555554432 455444 221 112335678899999999999 5442 2221 11111111257899
Q ss_pred HHHHHHcCCCEEEecCCcccCChh----HHHHHHHHHH-HcCCccccee
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEE----TLLRYVRLVK-SAGLKAKPKF 150 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~----~r~~lI~~~~-~~G~~v~~E~ 150 (289)
++.|+++|.+.|=+.-|+. +.+ ...++.+.++ +.|.++.-|-
T Consensus 94 i~~a~~lGa~~vv~h~g~~--~~~~~~~~l~~l~~~a~~~~gv~l~lEn 140 (270)
T 3aam_A 94 LEKAALLGVEYVVVHPGSG--RPERVKEGALKALRLAGVRSRPVLLVEN 140 (270)
T ss_dssp HHHHHHHTCCEEEECCCBS--CHHHHHHHHHHHHHHHTCCSSSEEEEEC
T ss_pred HHHHHHcCCCEEEECCCCC--CHHHHHHHHHHHHHhhcccCCCEEEEec
Confidence 9999999999999988876 332 2223444444 5566654444
No 282
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=69.22 E-value=15 Score=34.59 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=57.4
Q ss_pred cChhHHHHHHHHHHhCCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CC
Q 022982 67 MPKPFIEEVVKRAHQHDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GL 144 (289)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~ 144 (289)
++.+.+.+.|+-.++++- ++.-+... + . .++++.+.+.|.|.|+|+-..- ..+...+.|+.+++. +.
T Consensus 78 ~s~e~~~~~I~~vk~~~~~pvga~ig~------~--~-~e~a~~l~eaGad~I~ld~a~G--~~~~~~~~i~~i~~~~~~ 146 (361)
T 3khj_A 78 MDMESQVNEVLKVKNSGGLRVGAAIGV------N--E-IERAKLLVEAGVDVIVLDSAHG--HSLNIIRTLKEIKSKMNI 146 (361)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEECT------T--C-HHHHHHHHHTTCSEEEECCSCC--SBHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHhccCceEEEEeCC------C--H-HHHHHHHHHcCcCeEEEeCCCC--CcHHHHHHHHHHHHhcCC
Confidence 445557777887777653 22211100 2 2 7788899999999999854332 234456778887774 43
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 145 ~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
.|.. ++ + . + .+.++..+++|||.|.+
T Consensus 147 ~Viv----g~----v-----------~-----------t----~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 147 DVIV----GN----V-----------V-----------T----EEATKELIENGADGIKV 172 (361)
T ss_dssp EEEE----EE----E-----------C-----------S----HHHHHHHHHTTCSEEEE
T ss_pred cEEE----cc----C-----------C-----------C----HHHHHHHHHcCcCEEEE
Confidence 3322 11 0 0 1 45678888999999999
No 283
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=68.72 E-value=5.4 Score=37.89 Aligned_cols=47 Identities=11% Similarity=0.168 Sum_probs=36.0
Q ss_pred HHHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 106 YVEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-|+++|+|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 48 ~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 48 KLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp THHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 35677999999999872111 11 2688999999999999999877644
No 284
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=68.61 E-value=20 Score=31.03 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc--------cCCh---hHHHHH
Q 022982 69 KPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL--------EIPE---ETLLRY 135 (289)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v--~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti--------~i~~---~~r~~l 135 (289)
.+.++++++.++++|+.+ +-|+--|. +.+.++|.+.|=+..-.. +.+. ++-.++
T Consensus 97 ~~e~~~~~~~a~~~Gl~~iv~v~~~~e~-------------~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ 163 (219)
T 2h6r_A 97 LADIEAVINKCKNLGLETIVCTNNINTS-------------KAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRA 163 (219)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESSSHHH-------------HHHTTTCCSEEEECCCC--------------CSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCchHH-------------HHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHH
Confidence 345999999999999943 44754443 223445666666654331 2222 344455
Q ss_pred HHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCC
Q 022982 136 VRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHA 213 (289)
Q Consensus 136 I~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~ 213 (289)
|+...+ +..+..++|++. -+.++...++|||-|+| ++.+.+..
T Consensus 164 ir~~~~-~~~ii~ggGI~~---------------------------------~~~~~~~~~~gaDgvlV-GsAi~~~~ 206 (219)
T 2h6r_A 164 VKEINK-DVKVLCGAGISK---------------------------------GEDVKAALDLGAEGVLL-ASGVVKAK 206 (219)
T ss_dssp HHHHCT-TCEEEECSSCCS---------------------------------HHHHHHHHTTTCCCEEE-SHHHHTCS
T ss_pred HHhccC-CCeEEEEeCcCc---------------------------------HHHHHHHhhCCCCEEEE-cHHHhCcc
Confidence 555432 567777777732 14445566889999988 34455443
No 285
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=68.57 E-value=9.1 Score=38.15 Aligned_cols=22 Identities=23% Similarity=0.179 Sum_probs=18.8
Q ss_pred cHHHHHHHHHHHHHccCcEEEE
Q 022982 183 DVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~Vii 204 (289)
++++.++.++..-++|+++|-+
T Consensus 226 ~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 226 TFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEc
Confidence 5778888888888999999977
No 286
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.49 E-value=35 Score=28.50 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=42.6
Q ss_pred ccEEEecCccccccChhHHHHHHHHHHhCCceecC--CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH
Q 022982 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET 131 (289)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~--GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~ 131 (289)
+|.+=+...+ .+.++..-++++.+++.+.- ||.. + .++++.+.+.|.|.|-+. .. +
T Consensus 33 ~~~i~l~~~~-----~~~~~~i~~i~~~~~~~l~vg~g~~~------~----~~~i~~a~~~Gad~V~~~--~~--~--- 90 (212)
T 2v82_A 33 FDAVEIPLNS-----PQWEQSIPAIVDAYGDKALIGAGTVL------K----PEQVDALARMGCQLIVTP--NI--H--- 90 (212)
T ss_dssp CCEEEEETTS-----TTHHHHHHHHHHHHTTTSEEEEECCC------S----HHHHHHHHHTTCCEEECS--SC--C---
T ss_pred CCEEEEeCCC-----hhHHHHHHHHHHhCCCCeEEEecccc------C----HHHHHHHHHcCCCEEEeC--CC--C---
Confidence 6777666543 22344333456667765443 3321 1 357889999999999522 21 1
Q ss_pred HHHHHHHHHHcCCcccc
Q 022982 132 LLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 132 r~~lI~~~~~~G~~v~~ 148 (289)
.++++.+++.|.++.+
T Consensus 91 -~~~~~~~~~~g~~~~~ 106 (212)
T 2v82_A 91 -SEVIRRAVGYGMTVCP 106 (212)
T ss_dssp -HHHHHHHHHTTCEEEC
T ss_pred -HHHHHHHHHcCCCEEe
Confidence 3467778887776554
No 287
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=68.49 E-value=6.9 Score=37.88 Aligned_cols=46 Identities=11% Similarity=0.250 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHcCCccccee
Q 022982 105 EYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+=|+++++|||++|+++==+- + + +.++..++|+.+.++|++|+-.+
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 346788999999999982111 1 2 26899999999999999987655
No 288
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=68.46 E-value=4.6 Score=39.85 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=35.3
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceee
Q 022982 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-
T Consensus 179 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 179 LPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 5788999999999982 21111 368999999999999999986653
No 289
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=68.43 E-value=25 Score=32.79 Aligned_cols=172 Identities=9% Similarity=0.061 Sum_probs=90.1
Q ss_pred chhHHHHHHHhhccc--ccEEEecCccccccChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHH
Q 022982 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQ 112 (289)
Q Consensus 39 g~~~~~DlLe~ag~y--ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~ 112 (289)
....++.+|+.|-+- ==+|-++-|+...++...+.--..++++++|+|.. |.=+|.+ .+ .++.|++.-..
T Consensus 36 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i-~~---ai~~~~~~~~~ 111 (306)
T 3pm6_A 36 NLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDPEII-KR---AADLSRSETHE 111 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCHHHH-HH---HHHTC------
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCHHHH-HH---HHHhhhhccCC
Confidence 344555555544321 01344444444444444455555666777776664 3222322 11 22222222333
Q ss_pred cCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHH
Q 022982 113 VGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRR 190 (289)
Q Consensus 113 lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~ 190 (289)
-||+.|=+.--..++.+- .=.++++.+...|.-|--|+|.=- -.+|..- .....+...+ ||++..+.
T Consensus 112 ~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~ig------G~Edgv~----~~~~~~~~yT-~Peea~~F 180 (306)
T 3pm6_A 112 PGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIE------GGEDGVQ----DTVDLEGVLT-TPEESEEF 180 (306)
T ss_dssp CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCC------CCBTTBC----CCTTCCCBCC-CHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeec------cccCCcc----ccccccccCC-CHHHHHHH
Confidence 399999996555444332 223678888899999999998721 1222100 0000011112 67776665
Q ss_pred HHHHHHccCcEEEEe---ccccccC-CCCccHHHHHHHHhccC
Q 022982 191 AERCLEAGADMIMID---SDDVCKH-ADSLRADIIAKVIGRLG 229 (289)
Q Consensus 191 ~~~dLeAGA~~ViiE---arGI~d~-~G~~r~d~v~~ii~~l~ 229 (289)
+ +.|.|.+=+= +-|.|.. +-.++.+.+++|-+.++
T Consensus 181 v----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~ 219 (306)
T 3pm6_A 181 V----ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVG 219 (306)
T ss_dssp H----TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHT
T ss_pred H----HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhC
Confidence 5 5898854331 1389964 56899999999988774
No 290
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=68.42 E-value=7.2 Score=37.17 Aligned_cols=47 Identities=9% Similarity=0.136 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHcCCccccee
Q 022982 104 KEYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
.+-++++++|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3346778999999999982111 02 36889999999999999987665
No 291
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=68.26 E-value=13 Score=35.04 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.++.+.+.+.|.|+|+||.|+. .. + +++.+++. +. .|=++. | .+ +
T Consensus 244 ~~~la~~l~~~Gvd~i~v~~~~~--~~-~---~~~~ik~~-~~-iPvi~~-------G--------gi-t---------- 289 (362)
T 4ab4_A 244 FTYVARELGKRGIAFICSREREA--DD-S---IGPLIKEA-FG-GPYIVN-------E--------RF-D---------- 289 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCC--TT-C---CHHHHHHH-HC-SCEEEE-------S--------SC-C----------
T ss_pred HHHHHHHHHHhCCCEEEECCCCC--CH-H---HHHHHHHH-CC-CCEEEe-------C--------CC-C----------
Confidence 44567777889999999999982 21 2 34444442 00 132222 1 11 1
Q ss_pred cHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHHHHHHHHhccCCCc
Q 022982 183 DVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK 232 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ek 232 (289)
.+.+++.|++| ||.|++ +|++.- +.+++.++.+..++..
T Consensus 290 -----~e~a~~~l~~g~aD~V~i-GR~~la-----nPdl~~k~~~g~~l~~ 329 (362)
T 4ab4_A 290 -----KASANAALASGKADAVAF-GVPFIA-----NPDLPARLAADAPLNE 329 (362)
T ss_dssp -----HHHHHHHHHTTSCSEEEE-SHHHHH-----CTTHHHHHHTTCCCCC
T ss_pred -----HHHHHHHHHcCCccEEEE-CHHhHh-----CcHHHHHHHcCCCCCC
Confidence 46788889998 999988 565432 2468889988877653
No 292
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=68.04 E-value=12 Score=34.58 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=64.9
Q ss_pred HHHHHHHhCCcee------cCCc--HHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 022982 74 EVVKRAHQHDVYV------STGD--WAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 74 eKI~l~~~~gV~v------~~Gt--lfE~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (289)
+-++.++..++.+ .||. +-.+|+.-|.. ....+| .|+|=|=|.-+..--. -...|+++++...
T Consensus 126 ~~v~~~~g~~~~i~dTRKT~PglR~l~kyAV~~GGg-------~nHR~gL~d~vlikdNHi~~~G~-i~~Av~~ar~~~~ 197 (287)
T 3tqv_A 126 KLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGG-------FNHRIGLFDAYLIKENHIRSAGG-IAKAVTKAKKLDS 197 (287)
T ss_dssp HHHHHHTTSSCEEECCSCCCTTCHHHHHHHHHHTTC-------BCCCSSSSSSEEECTTTC----C-HHHHHHHHHHHCT
T ss_pred HHHHHhCCCCeEEEeecccCcchHHHHHHHHHhcCc-------hheeccCccEEEEeHHHHHHhCC-HHHHHHHHHhhCC
Confidence 4455666666633 4673 55566665511 113344 2466665555444322 3367788877543
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHH
Q 022982 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKV 224 (289)
Q Consensus 145 ~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~i 224 (289)
.++=|+-+. | +++++..++||||.|+++ |+..+.+.++
T Consensus 198 ~~~IeVEv~-----------------------------t----l~ea~eAl~aGaD~I~LD---------n~~~~~l~~a 235 (287)
T 3tqv_A 198 NKVVEVEVT-----------------------------N----LDELNQAIAAKADIVMLD---------NFSGEDIDIA 235 (287)
T ss_dssp TSCEEEEES-----------------------------S----HHHHHHHHHTTCSEEEEE---------SCCHHHHHHH
T ss_pred CCcEEEEeC-----------------------------C----HHHHHHHHHcCCCEEEEc---------CCCHHHHHHH
Confidence 333333220 1 377788889999999994 3566778888
Q ss_pred HhccCCCceEEecC
Q 022982 225 IGRLGLEKTMFEAT 238 (289)
Q Consensus 225 i~~l~~eklifEAP 238 (289)
++.+. .++..||.
T Consensus 236 v~~~~-~~v~ieaS 248 (287)
T 3tqv_A 236 VSIAR-GKVALEVS 248 (287)
T ss_dssp HHHHT-TTCEEEEE
T ss_pred HHhhc-CCceEEEE
Confidence 77664 45666665
No 293
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=68.02 E-value=7.4 Score=37.04 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHcCCccccee
Q 022982 105 EYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+=|+++++|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+
T Consensus 27 ~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 27 DDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 346677999999999972111 02 36899999999999999987655
No 294
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=68.01 E-value=7.4 Score=37.10 Aligned_cols=46 Identities=13% Similarity=0.169 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHcCCccccee
Q 022982 105 EYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+=|+++++|||++|+++==+- + + +.++..++|+.+.++|++|+-.+
T Consensus 29 ~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 29 SDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 346788999999999982111 0 2 36899999999999999987665
No 295
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=67.88 E-value=13 Score=34.99 Aligned_cols=84 Identities=14% Similarity=0.137 Sum_probs=53.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.++.+.+.+.|.|+|+||.|+. . . .+++.+++. +. .|=++. | .+ +
T Consensus 252 ~~~la~~l~~~Gvd~i~v~~~~~--~-~---~~~~~ik~~-~~-iPvi~~-------G--------gi-t---------- 297 (361)
T 3gka_A 252 FGHVARELGRRRIAFLFARESFG--G-D---AIGQQLKAA-FG-GPFIVN-------E--------NF-T---------- 297 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS--T-T---CCHHHHHHH-HC-SCEEEE-------S--------SC-C----------
T ss_pred HHHHHHHHHHcCCCEEEECCCCC--C-H---HHHHHHHHH-cC-CCEEEe-------C--------CC-C----------
Confidence 44566777888999999999982 1 1 234444442 00 122222 1 11 1
Q ss_pred cHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 183 DVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
.+.+++.|++| ||.|++ +|++.-+ .+++.++.+..++.
T Consensus 298 -----~e~a~~~l~~G~aD~V~i-GR~~lad-----Pdl~~k~~~g~~l~ 336 (361)
T 3gka_A 298 -----LDSAQAALDAGQADAVAW-GKLFIAN-----PDLPRRFKLNAPLN 336 (361)
T ss_dssp -----HHHHHHHHHTTSCSEEEE-SHHHHHC-----TTHHHHHHHTCCCC
T ss_pred -----HHHHHHHHHcCCccEEEE-CHHhHhC-----cHHHHHHHhCCCCC
Confidence 46788889998 999988 6654422 46788898887765
No 296
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=67.60 E-value=14 Score=35.45 Aligned_cols=65 Identities=22% Similarity=0.249 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
.++++.+-+.|.+.|.|....- . ++...+.|+.+++. |..|.. | . + .+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G-~-~~~~~e~I~~ik~~~~i~Vi~--g--~----V-----------~t---------- 194 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG-H-SLNIIRTLKEIKSKMNIDVIV--G--N----V-----------VT---------- 194 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC-S-BHHHHHHHHHHHTTCCCEEEE--E--E----E-----------CS----------
T ss_pred HHHHHHHHHcCCCEEEEeCCCC-C-cccHHHHHHHHHhcCCCeEEE--e--e----c-----------CC----------
Confidence 5789999999999999843221 2 34446788888875 444332 1 0 0 01
Q ss_pred cHHHHHHHHHHHHHccCcEEEE
Q 022982 183 DVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~Vii 204 (289)
.+.++..+++|||.|++
T Consensus 195 -----~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 195 -----EEATKELIENGADGIKV 211 (400)
T ss_dssp -----HHHHHHHHHTTCSEEEE
T ss_pred -----HHHHHHHHHcCCCEEEE
Confidence 56778888999999999
No 297
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=67.51 E-value=19 Score=32.00 Aligned_cols=161 Identities=13% Similarity=0.160 Sum_probs=83.2
Q ss_pred CceeEecCCCCCCCchhHHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCC---------cee--cCC--c
Q 022982 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHD---------VYV--STG--D 90 (289)
Q Consensus 25 GlT~V~DkGl~~~~g~~~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~g---------V~v--~~G--t 90 (289)
|...+.|=-+.= =++..+...+.+.++ +|++=+ ++....+.++.-++.+++++ |.+ +.. .
T Consensus 59 g~~iflDlK~~D--I~nTv~~~~~~~~~~gad~vTv----h~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~ 132 (239)
T 3tr2_A 59 GYRIFLDLKFYD--IPQTVAGACRAVAELGVWMMNI----HISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSD 132 (239)
T ss_dssp TCCEEEEEEECS--CHHHHHHHHHHHHHTTCSEEEE----EGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHH
T ss_pred CCCEEEEecccc--cchHHHHHHHHHHhCCCCEEEE----eccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHH
Confidence 556666655410 133444444444444 555544 33556778888888888763 111 222 3
Q ss_pred HHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc-cceeeeecCCCCCCCccccccc
Q 022982 91 WAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA-KPKFAVMFNKSDIPSDRDRAFG 168 (289)
Q Consensus 91 lfE~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v-~~E~g~k~~~~evg~~~d~~~~ 168 (289)
|-|.-+... .+.+.++-+.+++.|.+.+-+|. .....||.....+|.. -|=++.+. +. .+|
T Consensus 133 l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~--------~e~~~ir~~~~~~fl~vtPGIr~~g--~~---~~d---- 195 (239)
T 3tr2_A 133 LKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSA--------QEAALLRKQFDRNFLLVTPGIRLET--DE---KGD---- 195 (239)
T ss_dssp HHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCH--------HHHHHHHTTCCTTSEEEECCBC-----------------
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECc--------hhHHHHHHhcCCCcEEECCCcCCCC--CC---cCc----
Confidence 433211100 02455666777888999887772 2235566655556643 35444321 11 112
Q ss_pred cccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhc
Q 022982 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 227 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~ 227 (289)
+.+|-..+..++||||++ |=+|.||.+..- ...+++|.+.
T Consensus 196 ----------------Q~rv~t~~~~~~aGad~l-VvGr~I~~a~dp--~~a~~~i~~~ 235 (239)
T 3tr2_A 196 ----------------QKRVMTPRAAIQAGSDYL-VIGRPITQSTDP--LKALEAIDKD 235 (239)
T ss_dssp ------------------CCBCHHHHHHHTCSEE-EECHHHHTSSSH--HHHHHHHHHH
T ss_pred ----------------ccccCCHHHHHHcCCCEE-EEChHHhCCCCH--HHHHHHHHHH
Confidence 222334566678999965 557999998642 3345555443
No 298
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=67.51 E-value=12 Score=31.91 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
...+..+.+.+.|.++|.|.+-.-. -+.... .+|+.+++. ++. +-+..+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ip----v~v~gg------------------------ 82 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQ----VELSGG------------------------ 82 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSE----EEEESS------------------------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCc----EEEECC------------------------
Confidence 3445566777889999999852111 111122 567776663 111 222110
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceE
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekli 234 (289)
+.|+ ++++..+++||+.|++=+.-+.+ .+.+.++++.+| ++++
T Consensus 83 -i~~~----~~~~~~l~~Gad~V~lg~~~l~~------p~~~~~~~~~~g-~~~~ 125 (244)
T 2y88_A 83 -IRDD----ESLAAALATGCARVNVGTAALEN------PQWCARVIGEHG-DQVA 125 (244)
T ss_dssp -CCSH----HHHHHHHHTTCSEEEECHHHHHC------HHHHHHHHHHHG-GGEE
T ss_pred -CCCH----HHHHHHHHcCCCEEEECchHhhC------hHHHHHHHHHcC-CCEE
Confidence 1123 45777889999999986653322 467888887777 4444
No 299
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=67.51 E-value=19 Score=30.85 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=60.0
Q ss_pred HHHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecC-----CcHHH-----------HHHHhCCchHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-----GDWAE-----------HLIRNGPSAFK 104 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-----GtlfE-----------~a~~qg~~~~~ 104 (289)
.+++.++.+.+. .|.+=+.+- ++. .+++.-++++++|+.+.. +.|.. ..-.. +.++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~ 96 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFP----YDF-DADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFR--DNVD 96 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCC----TTS-CHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHH--HHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCC----ccC-CHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHH--HHHH
Confidence 445555544443 677766541 222 378888999999997653 23321 00111 2588
Q ss_pred HHHHHHHHcCCCEEEecCCccc--CCh-hHH-------HHHHHHHHHcCCcccce
Q 022982 105 EYVEDCKQVGFDTIELNVGSLE--IPE-ETL-------LRYVRLVKSAGLKAKPK 149 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~--i~~-~~r-------~~lI~~~~~~G~~v~~E 149 (289)
+.++.|+++|.+.|=+..| .. .+. +.+ .++.+.+++.|+++.-|
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999999999999777 32 221 222 23445566677765444
No 300
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=67.48 E-value=10 Score=34.06 Aligned_cols=137 Identities=14% Similarity=0.156 Sum_probs=78.9
Q ss_pred cChhHHHHHHHHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 022982 67 MPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (289)
++.+.+.+.++.+.++|+ .++ .||- .-.+ + .+.+.+.++.+++.|+ .|.+|.|.+ +. +.++++++.|+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe-~p~~-~-~~~~~~li~~i~~~~~-~i~~s~g~l--~~----e~l~~L~~ag~ 153 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGE-DPYX-M-PDVISDIVKEIKKMGV-AVTLSLGEW--PR----EYYEKWKEAGA 153 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESC-CGGG-T-THHHHHHHHHHHTTSC-EEEEECCCC--CH----HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCC-CCCc-c-HHHHHHHHHHHHhcCc-eEEEecCCC--CH----HHHHHHHHhCC
Confidence 466778888888888887 333 3432 0111 1 2478899999999865 566888764 33 45666788888
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHH--
Q 022982 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIA-- 222 (289)
Q Consensus 145 ~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~-- 222 (289)
...+ ++.+.. .+..+ ..+.|. .+.+++++.++..-++|-. +..--++.-.|+=.+++.+
T Consensus 154 ~~v~-i~let~-------~~~~~-~~i~~~-------~~~~~~~~~i~~~~~~Gi~---v~~~~i~G~p~et~e~~~~~~ 214 (348)
T 3iix_A 154 DRYL-LRHETA-------NPVLH-RKLRPD-------TSFENRLNCLLTLKELGYE---TGAGSMVGLPGQTIDDLVDDL 214 (348)
T ss_dssp CEEE-CCCBCS-------CHHHH-HHHSTT-------SCHHHHHHHHHHHHHTTCE---EEECBEESCTTCCHHHHHHHH
T ss_pred CEEe-eeeeeC-------CHHHH-HHhCCC-------cCHHHHHHHHHHHHHhCCe---eccceEEeCCCCCHHHHHHHH
Confidence 6554 555321 11111 111111 1589999999999999963 4444344332332333322
Q ss_pred HHHhccCCCc
Q 022982 223 KVIGRLGLEK 232 (289)
Q Consensus 223 ~ii~~l~~ek 232 (289)
..+..++++.
T Consensus 215 ~~l~~l~~~~ 224 (348)
T 3iix_A 215 LFLKEHDFDM 224 (348)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHhcCCCE
Confidence 2335566554
No 301
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=67.39 E-value=15 Score=33.52 Aligned_cols=135 Identities=15% Similarity=0.162 Sum_probs=80.6
Q ss_pred HHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 110 CKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 110 ~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
+.+.|||+|=+.|. +..++.++.+...+.+.+. -. .|=+-. |-.|+.|.
T Consensus 33 ~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~-~~-~~~vva-----------D~pfgsy~-------- 91 (264)
T 1m3u_A 33 FADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRG-AP-NCLLLA-----------DLPFMAYA-------- 91 (264)
T ss_dssp HHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHH-CT-TSEEEE-----------ECCTTSSS--------
T ss_pred HHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhh-CC-CCcEEE-----------ECCCCCcC--------
Confidence 45679999988652 3467888888888877762 10 010111 22232221
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEecc-------------cc------------------ccCCCCccHHHHHHHH---
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSD-------------DV------------------CKHADSLRADIIAKVI--- 225 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEar-------------GI------------------~d~~G~~r~d~v~~ii--- 225 (289)
++++.++.+.+.+++||+.|-+|+- || |.-.|+- .+..++++
T Consensus 92 ---~~~~a~~~a~rl~kaGa~aVklEgg~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt-~~~a~~~i~rA 167 (264)
T 1m3u_A 92 ---TPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRG-DEAGDQLLSDA 167 (264)
T ss_dssp ---SHHHHHHHHHHHHHTTCSEEECCCSGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCS-HHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHcCCCEEEECCcHHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCC-HHHHHHHHHHH
Confidence 4899999999999999999999984 32 2222321 12234443
Q ss_pred ---hccCCCceEEecCCchhHHHHHHHhCCCccc-c---cCCCCchhhhhh
Q 022982 226 ---GRLGLEKTMFEATNPRTSEWFIRRYGPKVNL-F---VDHSQVMDLECL 269 (289)
Q Consensus 226 ---~~l~~eklifEAP~k~qQ~~~I~~fG~~VNL-g---I~~~eVl~LE~L 269 (289)
..-|.+-|..|+...++-..+-+....=+|- | =--.||+-..-|
T Consensus 168 ~a~~eAGA~~ivlE~vp~~~a~~it~~l~iP~igIGag~~~dgQvLV~~D~ 218 (264)
T 1m3u_A 168 LALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA 218 (264)
T ss_dssp HHHHHHTCCEEEEESCCHHHHHHHHHHCSSCEEEESSCTTSSEEEECHHHH
T ss_pred HHHHHCCCcEEEEecCCHHHHHHHHHhCCCCEEEeCCCCCCCcceeeHHhh
Confidence 4568999999997655555555555433332 2 223456555433
No 302
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=66.98 E-value=6.3 Score=33.87 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=63.0
Q ss_pred HHHHHHhhccc-ccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-------HH---HHHHHhCCchHHHHHHHHH
Q 022982 43 LEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDCK 111 (289)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-------lf---E~a~~qg~~~~~~yl~~~k 111 (289)
+++.++.+.+. +|.+=+......-.+...+++..++++++|+.+...+ +. +....+.-+.+++.++.|+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 98 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCH 98 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555544433 6777776654333344568899999999999665421 11 1111111126899999999
Q ss_pred HcCCCEEEecC----Cc--c--c-CChhHHH-------HHHHHHHHcCCccccee
Q 022982 112 QVGFDTIELNV----GS--L--E-IPEETLL-------RYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 112 ~lGF~~IEISd----Gt--i--~-i~~~~r~-------~lI~~~~~~G~~v~~E~ 150 (289)
++|.+.|=++- |. . . -..+.+. ++.+.+++.|.++.-|-
T Consensus 99 ~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 153 (290)
T 2qul_A 99 LLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEV 153 (290)
T ss_dssp HHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEEC
T ss_pred HcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 99999997642 43 1 1 1233333 34445666677655443
No 303
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=66.81 E-value=5.5 Score=39.34 Aligned_cols=45 Identities=13% Similarity=0.234 Sum_probs=35.3
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceee
Q 022982 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-
T Consensus 178 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 178 LDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp HHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred hHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 6788999999999973 21111 368999999999999999976653
No 304
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=66.77 E-value=4.3 Score=37.67 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-C--C----hhHHHHHHHHHHHcCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE-I--P----EETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i--~----~~~r~~lI~~~~~~G~~v~~ 148 (289)
.+.+.++.++++||++||+....+. . . .++..++-+.+++.|+++..
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (386)
T 1muw_A 34 DPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPM 87 (386)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEE
Confidence 3788899999999999999853210 0 1 35667788888999998654
No 305
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=66.75 E-value=46 Score=32.48 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=66.8
Q ss_pred HHHHHHHhhcccccEEEecCcc-ccccChhHHHHHHHHHHhCCceecC--Cc--HHHH----HHHhCC------------
Q 022982 42 VLEDIFESMGQFVDGLKFSGGS-HSLMPKPFIEEVVKRAHQHDVYVST--GD--WAEH----LIRNGP------------ 100 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GT-s~l~p~~~l~eKI~l~~~~gV~v~~--Gt--lfE~----a~~qg~------------ 100 (289)
.++++++..| ++.+|+...- ....+.+.|++.++.++++|+.+.. .. ..+. +...|.
T Consensus 152 ~~~~l~~~~G--~~~iki~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~ 229 (559)
T 2fty_A 152 QLQAAYNDYG--VSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPS 229 (559)
T ss_dssp HHHHHHHHHC--CCEEEEESSSTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCH
T ss_pred HHHHHHHHCC--CCEEEEEecCCCCcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCH
Confidence 3444553445 6889976532 1456778899999999999987764 32 2221 233331
Q ss_pred ----chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022982 101 ----SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 101 ----~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
..+.+.+..++.+|.. +-|. -++.++=.++|+++++.|..|..|+-.
T Consensus 230 ~~E~~av~~~i~la~~~g~~-vhi~----H~s~~~~~~~i~~ak~~G~~Vt~e~~p 280 (559)
T 2fty_A 230 IVEGEATNRAITLATTMDTP-ILFV----HVSSPQAAEVIKQAQTKGLKVYAETCP 280 (559)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-EEEC----SCCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred HHHHHHHHHHHHHHHHhCCC-EEEE----cCCCHHHHHHHHHHHHcCCceEEeecC
Confidence 2466677788888876 3342 333454479999999999988666644
No 306
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=66.68 E-value=26 Score=30.96 Aligned_cols=103 Identities=10% Similarity=0.094 Sum_probs=63.0
Q ss_pred HHHHHHhhccc-ccEEEecCccc-cccChhHHHHHHHHHHhCCceecC-C-cHH--------H-----------HHHHhC
Q 022982 43 LEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-G-DWA--------E-----------HLIRNG 99 (289)
Q Consensus 43 ~~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~eKI~l~~~~gV~v~~-G-tlf--------E-----------~a~~qg 99 (289)
+++.|+.+.+. .|.+=+.+... ..++. .+++.-++++++|+.+.. . .++ + ....+
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~-~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~- 108 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGV-PMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIME- 108 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTE-EHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHH-
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCC-CHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHH-
Confidence 55666655544 66666654221 13333 377788899999997753 1 120 0 11122
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHcCCc--ccce
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLK--AKPK 149 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~-------~lI~~~~~~G~~--v~~E 149 (289)
.+++.++.|+++|.+.|=+..+.-.-+.+.+. ++.+.+++.|++ +.-|
T Consensus 109 --~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 109 --YWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp --HHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred --HHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 68999999999999999885332223444443 455677888888 6544
No 307
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=66.57 E-value=5.9 Score=39.31 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=67.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC--C--hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEI--P--EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i--~--~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~ 178 (289)
--++.+.+.+.|.+.+=+-|-+-.. + ...-.++|+++++.-+ .| +-+ +. -+-..+|+. .+++
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~--ip-i~v--gG-GIr~~~d~~--~~~~------ 347 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVF--VP-LTV--GG-GIKDIVDVD--GTKI------ 347 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCC--SC-EEE--ES-SCSCEECTT--CCEE------
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCC--Cc-EEE--eC-ccccchhcc--cccc------
Confidence 3456666677798887555432222 2 2234678888877411 11 111 11 111112211 1111
Q ss_pred cccccHHHHHHHHHHHHHccCcEEEEeccccc-------cCCCCccHHHHHHHHhccCCCceEEecCC
Q 022982 179 EYVEDVDLLIRRAERCLEAGADMIMIDSDDVC-------KHADSLRADIIAKVIGRLGLEKTMFEATN 239 (289)
Q Consensus 179 ~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~-------d~~G~~r~d~v~~ii~~l~~eklifEAP~ 239 (289)
-.++.+++.+++||++|+|-+.-+. +.++..+.++++++.+++|-++++.=..-
T Consensus 348 -------~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~ 408 (555)
T 1jvn_A 348 -------PALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDP 408 (555)
T ss_dssp -------CHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECE
T ss_pred -------hHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEc
Confidence 1378899999999999999886433 34567778999999998887777766554
No 308
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=66.41 E-value=18 Score=32.07 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=16.9
Q ss_pred HHHHHHHHccCcEEEEeccccccC
Q 022982 189 RRAERCLEAGADMIMIDSDDVCKH 212 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarGI~d~ 212 (289)
++++..+++|||-||+=+- |++.
T Consensus 218 e~~~~~~~agAD~vVVGSa-i~~~ 240 (268)
T 1qop_A 218 EQVSAAVRAGAAGAISGSA-IVKI 240 (268)
T ss_dssp HHHHHHHHTTCSEEEECHH-HHHH
T ss_pred HHHHHHHHcCCCEEEEChH-Hhhh
Confidence 6677778999999998543 4433
No 309
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=66.26 E-value=6.9 Score=33.35 Aligned_cols=51 Identities=10% Similarity=0.081 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHcCCCEEEe---cCCccc-------------C--C-hhHHHHHHHHHHHcCCcccceeee
Q 022982 102 AFKEYVEDCKQVGFDTIEL---NVGSLE-------------I--P-EETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEI---SdGti~-------------i--~-~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
.+++.++.+|++||++|-| +++... . . .+..-++++.|.++|++|+-++.-
T Consensus 43 ~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 43 RIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7899999999999999998 222110 0 1 122346899999999999988754
No 310
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=66.23 E-value=11 Score=34.81 Aligned_cols=130 Identities=8% Similarity=0.052 Sum_probs=77.6
Q ss_pred HHHHHHHhhcccccEE-EecCccccccChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 42 VLEDIFESMGQFVDGL-KFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 42 ~~~DlLe~ag~yID~l-Kfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
..++.++.-++-||+. .+|-+...-+ .+.+.+-++.||++|+++.. |.=+ ..+++.+..-.+.+.++|-|
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~-l~~i~~v~~~a~~~GlpvIie~~~G~~~----~~d~e~i~~aariA~elGAD 204 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQS-IKNIIQLVDAGMKVGMPTMAVTGVGKDM----VRDQRYFSLATRIAAEMGAQ 204 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHH-HHHHHHHHHHHHTTTCCEEEEECC--------CCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHH-HHHHHHHHHHHHHcCCEEEEECCCCCcc----CCCHHHHHHHHHHHHHhCCC
Confidence 6788888887888874 3332111111 12466889999999986542 3211 12223455566778899999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHH
Q 022982 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (289)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLe 196 (289)
.|-.+- +.+.. +++.+.. .+.+.... +.+ .+.++..+.++..++
T Consensus 205 ~VKt~~-----t~e~~----~~vv~~~-----~vPVv~~G------G~~----------------~~~~~~l~~v~~ai~ 248 (295)
T 3glc_A 205 IIKTYY-----VEKGF----ERIVAGC-----PVPIVIAG------GKK----------------LPEREALEMCWQAID 248 (295)
T ss_dssp EEEEEC-----CTTTH----HHHHHTC-----SSCEEEEC------CSC----------------CCHHHHHHHHHHHHH
T ss_pred EEEeCC-----CHHHH----HHHHHhC-----CCcEEEEE------CCC----------------CCHHHHHHHHHHHHH
Confidence 999983 22322 3333321 12232211 110 036778999999999
Q ss_pred ccCcEEEEeccccccCC
Q 022982 197 AGADMIMIDSDDVCKHA 213 (289)
Q Consensus 197 AGA~~ViiEarGI~d~~ 213 (289)
+||+-|++ +|.||...
T Consensus 249 aGA~Gv~v-GRnI~q~~ 264 (295)
T 3glc_A 249 QGASGVDM-GRNIFQSD 264 (295)
T ss_dssp TTCSEEEE-SHHHHTSS
T ss_pred hCCeEEEe-HHHHhcCc
Confidence 99997776 77788775
No 311
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=66.21 E-value=33 Score=32.07 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=28.7
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
++++.++.++..-++|+++|-+=++...... ....+.+.+|-+.++
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~-~~~~~~~~~v~~~~~ 294 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGK-PYSEAFRQKVRERFH 294 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCC-CCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCC-cccHHHHHHHHHHCC
Confidence 4677888888888999999988765321111 122345555555444
No 312
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=65.88 E-value=6.6 Score=37.42 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=36.5
Q ss_pred HHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 022982 107 VEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (289)
++++|+|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+-..
T Consensus 49 LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 49 LDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp HHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 5778999999999872111 11 36899999999999999998877553
No 313
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=65.88 E-value=53 Score=28.01 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=15.6
Q ss_pred HHHHHHHHccCcEEEEecccccc
Q 022982 189 RRAERCLEAGADMIMIDSDDVCK 211 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEarGI~d 211 (289)
+.++..+++||+-|++=+. ||+
T Consensus 204 e~i~~~~~~Gad~vivGsa-i~~ 225 (248)
T 1geq_A 204 EHVVSLLKEGANGVVVGSA-LVK 225 (248)
T ss_dssp HHHHHHHHTTCSEEEECHH-HHH
T ss_pred HHHHHHHHcCCCEEEEcHH-HHh
Confidence 5566677899999998543 443
No 314
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=65.73 E-value=16 Score=32.03 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=59.7
Q ss_pred HHHHHHHhhccc-ccEEEecCcccc-----ccChhHHHHHHHHHHhCCc-eecC-CcHH--------HHHHHhCCchHHH
Q 022982 42 VLEDIFESMGQF-VDGLKFSGGSHS-----LMPKPFIEEVVKRAHQHDV-YVST-GDWA--------EHLIRNGPSAFKE 105 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~GTs~-----l~p~~~l~eKI~l~~~~gV-~v~~-Gtlf--------E~a~~qg~~~~~~ 105 (289)
.+++.++.+.++ +|.+=+...... ..+++.+++.-++++++|+ .++. +.+. +....+.-+.+++
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~~ 98 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRA 98 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHHHHHHHH
Confidence 456666655543 566666222111 1224568888899999999 4443 2221 2222222236888
Q ss_pred HHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHH
Q 022982 106 YVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKS 141 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~--i~~~~r~~lI~~~~~ 141 (289)
.++.|+++|.+.|=+--|+.. -+.+.+.++++.+++
T Consensus 99 ~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~ 136 (303)
T 3aal_A 99 EIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNE 136 (303)
T ss_dssp HHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999988777542 224455566666655
No 315
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=65.60 E-value=36 Score=30.80 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=71.2
Q ss_pred hHHHHHHHhhcccccEEE-ec---CccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 41 NVLEDIFESMGQFVDGLK-FS---GGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~lK-fg---~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+.++-++.-++=||++= +| -|..-.. .+.+++-.+.|+++|+.+ =--+|.++..+++.+..-.+.|.+.|-|
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v-~~ei~~v~~a~~~~g~~l--KvIlEt~~L~d~e~i~~a~~ia~eaGAD 165 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVG-FDLVKACKEACAAANVLL--KVIIETGELKDEALIRKASEISIKAGAD 165 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHH-HHHHHHHHHHHHHTTCEE--EEECCHHHHCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHH-HHHHHHHHHHhcccCCeE--EEEEecccCCcHHHHHHHHHHHHHhCCC
Confidence 577888999999999874 44 2222222 224777778888776531 1135777777644577889999999999
Q ss_pred EEEecCCcccC--ChhHHHHHHHH-HHHcCCcccceeeeec
Q 022982 117 TIELNVGSLEI--PEETLLRYVRL-VKSAGLKAKPKFAVMF 154 (289)
Q Consensus 117 ~IEISdGti~i--~~~~r~~lI~~-~~~~G~~v~~E~g~k~ 154 (289)
.|--|.|+..- +.++= +++++ +++.| +-+.+++|-
T Consensus 166 fVKTSTGf~~~gAt~e~v-~lm~~~I~~~~--~g~~v~VKa 203 (260)
T 1p1x_A 166 FIKTSTGKVAVNATPESA-RIMMEVIRDMG--VEKTVGFKP 203 (260)
T ss_dssp EEECCCSCSSCCCCHHHH-HHHHHHHHHHT--CTTTCEEEC
T ss_pred EEEeCCCCCCCCCCHHHH-HHHHHHHHHhc--CCCCceEEE
Confidence 99999999854 55543 23333 34444 344577774
No 316
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=65.53 E-value=8.1 Score=35.04 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=39.8
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceec
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~ 87 (289)
......++++..++|++++|.|.--..-+..+.+++..++++.+|..|.
T Consensus 42 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~g~~Vf 90 (260)
T 3eww_A 42 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 90 (260)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhcCCeEE
Confidence 5678899999999999999999777666777788888787766776554
No 317
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=65.31 E-value=17 Score=33.51 Aligned_cols=136 Identities=16% Similarity=0.206 Sum_probs=77.4
Q ss_pred HHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 111 KQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 111 k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+.|||+|=+.|. +..++.++.+...+.+.+. -. .|=+- -|-.|+.|.
T Consensus 51 e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~-~~-~~~vv-----------aD~pfgsy~--------- 108 (281)
T 1oy0_A 51 DEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRG-AP-HALVV-----------ADLPFGSYE--------- 108 (281)
T ss_dssp HTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHH-CT-TSEEE-----------EECCTTSST---------
T ss_pred HHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhc-CC-CCeEE-----------EECCCCccc---------
Confidence 4679999965432 3467888888888877762 10 01111 122233221
Q ss_pred cccHHHHHHHHHHHHH-ccCcEEEEecc-------------cc--------c----cCCCCc----cHHHHHHHH-----
Q 022982 181 VEDVDLLIRRAERCLE-AGADMIMIDSD-------------DV--------C----KHADSL----RADIIAKVI----- 225 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLe-AGA~~ViiEar-------------GI--------~----d~~G~~----r~d~v~~ii----- 225 (289)
.++++.++.+.+.++ +||+.|-+|+- || + +..|.. |++..++++
T Consensus 109 -~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a 187 (281)
T 1oy0_A 109 -AGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIA 187 (281)
T ss_dssp -TCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHH
Confidence 158889999999998 99999999984 32 1 111211 222223333
Q ss_pred -hccCCCceEEecCCchhHHHHHHHhCCCccc-c---cCCCCchhhhhh
Q 022982 226 -GRLGLEKTMFEATNPRTSEWFIRRYGPKVNL-F---VDHSQVMDLECL 269 (289)
Q Consensus 226 -~~l~~eklifEAP~k~qQ~~~I~~fG~~VNL-g---I~~~eVl~LE~L 269 (289)
..-|.+-|..|+...++-..+-+....=+|- | =--.||+-..-|
T Consensus 188 ~~eAGA~~ivlE~vp~~~a~~it~~l~iP~igIGaG~~~dgQvLV~~D~ 236 (281)
T 1oy0_A 188 VAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQVLVWQDM 236 (281)
T ss_dssp HHHHTCSEEEEESCCHHHHHHHHHHCSSCEEEESSCSCSSEEEECHHHH
T ss_pred HHHcCCcEEEEecCCHHHHHHHHHhCCCCEEEeCCCCCCCcceeeHhhh
Confidence 4568999999997655555555555433332 2 223456555433
No 318
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=65.22 E-value=4.4 Score=32.49 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=36.4
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (289)
++.+.+.+++|.++|..+|=+|.|+.+ .++.+.++++|+++.
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G~~~------~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPGTEN------EELEEILSENGIEPV 109 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTTCCC------HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCh------HHHHHHHHHcCCeEE
Confidence 457889999999999999999999852 378999999999976
No 319
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=65.13 E-value=4.7 Score=41.03 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCCEEEecC------------------Ccc-----------cCC-------hhHHHHHHHHHHHcCCcccc
Q 022982 105 EYVEDCKQVGFDTIELNV------------------GSL-----------EIP-------EETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd------------------Gti-----------~i~-------~~~r~~lI~~~~~~G~~v~~ 148 (289)
+=|+++|+||+++|+++= |.- ..+ .++..++|+.+.++|++|+-
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 457788999999999972 111 121 48999999999999999987
Q ss_pred eeee
Q 022982 149 KFAV 152 (289)
Q Consensus 149 E~g~ 152 (289)
.+-.
T Consensus 335 DvV~ 338 (718)
T 2e8y_A 335 DVVF 338 (718)
T ss_dssp EECT
T ss_pred EEec
Confidence 7644
No 320
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=65.00 E-value=6.3 Score=35.65 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=73.0
Q ss_pred cccChhHHHHHHHHHHhCC--------ceecC--C--cHHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhH
Q 022982 65 SLMPKPFIEEVVKRAHQHD--------VYVST--G--DWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEET 131 (289)
Q Consensus 65 ~l~p~~~l~eKI~l~~~~g--------V~v~~--G--tlfE~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~ 131 (289)
+....+.++.-++.++++| |.+-+ . +|-|.-+.+. .+.+.++-+.+++.|.+.+-+|. +
T Consensus 113 ~~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa--------~ 184 (255)
T 3ldv_A 113 ASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSA--------Q 184 (255)
T ss_dssp GGGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCH--------H
T ss_pred ccCCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECH--------H
Confidence 3455677888788777664 33333 2 3433211110 01355666777899999998872 2
Q ss_pred HHHHHHHHHHcCCcc-cceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccc
Q 022982 132 LLRYVRLVKSAGLKA-KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVC 210 (289)
Q Consensus 132 r~~lI~~~~~~G~~v-~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~ 210 (289)
..+.||+....+|.. -|=++.+ .++ .+|- .++-..+..++|||++ ||=+|.||
T Consensus 185 e~~~iR~~~g~~fl~VtPGIr~q--g~~---~~dQ--------------------~Rv~t~~~a~~aGad~-iVvGr~I~ 238 (255)
T 3ldv_A 185 EASLLKQHLGREFKLVTPGIRPA--GSE---QGDQ--------------------RRIMTPAQAIASGSDY-LVIGRPIT 238 (255)
T ss_dssp HHHHHHHHHCTTSEEEEECCCCT--TST---TSSC--------------------SSSCCHHHHHHTTCSE-EEECHHHH
T ss_pred HHHHHHHhcCCCcEEEeCCcccC--cCC---ccce--------------------eccCCHHHHHHcCCCE-EEECHHHh
Confidence 467888887777863 4645442 111 2221 1233445567899996 55689999
Q ss_pred cCCCCccHHHHHHHHh
Q 022982 211 KHADSLRADIIAKVIG 226 (289)
Q Consensus 211 d~~G~~r~d~v~~ii~ 226 (289)
.+... ...+++|.+
T Consensus 239 ~a~dp--~~a~~~i~~ 252 (255)
T 3ldv_A 239 QAAHP--EVVLEEINS 252 (255)
T ss_dssp TCSCH--HHHHHHHHH
T ss_pred CCCCH--HHHHHHHHH
Confidence 98752 344454443
No 321
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=64.76 E-value=24 Score=29.65 Aligned_cols=74 Identities=12% Similarity=0.161 Sum_probs=38.8
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCC-------------ceecCCcHHHHHHHhCCchHHH
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHD-------------VYVSTGDWAEHLIRNGPSAFKE 105 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~g-------------V~v~~GtlfE~a~~qg~~~~~~ 105 (289)
.+...+.+++ +| .|++=++ +..+.+++.+.+.++.+.... +.+++.+|.+. ......+
T Consensus 88 ~~~~~~~~~~-~G--ad~V~i~--~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~----~~~~~~e 158 (253)
T 1h5y_A 88 SLEDATTLFR-AG--ADKVSVN--TAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREA----TGLDAVK 158 (253)
T ss_dssp SHHHHHHHHH-HT--CSEEEES--HHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEE----EEEEHHH
T ss_pred CHHHHHHHHH-cC--CCEEEEC--hHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeec----CCCCHHH
Confidence 3455666666 34 5666555 444544555555444332110 23444333211 1113556
Q ss_pred HHHHHHHcCCCEEEec
Q 022982 106 YVEDCKQVGFDTIELN 121 (289)
Q Consensus 106 yl~~~k~lGF~~IEIS 121 (289)
.++.+.++|.+.|=+.
T Consensus 159 ~~~~~~~~G~d~i~~~ 174 (253)
T 1h5y_A 159 WAKEVEELGAGEILLT 174 (253)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHhCCCCEEEEe
Confidence 6788889999998874
No 322
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=64.62 E-value=33 Score=33.42 Aligned_cols=117 Identities=16% Similarity=0.227 Sum_probs=62.6
Q ss_pred hHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022982 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (289)
...+.+++. -+|.+-+.... -.++ .+.+.|+-.++. ++++..|+- .-.+..+.+.+.|.|+|
T Consensus 234 ~~a~~l~~a---G~d~I~id~a~--g~~~-~~~~~i~~ir~~~p~~~Vi~g~v----------~t~e~a~~l~~aGaD~I 297 (496)
T 4fxs_A 234 ERVKALVEA---GVDVLLIDSSH--GHSE-GVLQRIRETRAAYPHLEIIGGNV----------ATAEGARALIEAGVSAV 297 (496)
T ss_dssp HHHHHHHHT---TCSEEEEECSC--TTSH-HHHHHHHHHHHHCTTCCEEEEEE----------CSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHhc---cCceEEecccc--ccch-HHHHHHHHHHHHCCCceEEEccc----------CcHHHHHHHHHhCCCEE
Confidence 344455543 37777776443 2333 344555555554 666554421 11133466788999999
Q ss_pred Eec--CCccc---------CChhHH-HHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 119 ELN--VGSLE---------IPEETL-LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 119 EIS--dGti~---------i~~~~r-~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
-|+ .|++. .|.-+- .++.+.+++.+..|+..-|+.+
T Consensus 298 ~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~-------------------------------- 345 (496)
T 4fxs_A 298 KVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRF-------------------------------- 345 (496)
T ss_dssp EECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCS--------------------------------
T ss_pred EECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCC--------------------------------
Confidence 986 33332 222221 2222223344555555555522
Q ss_pred HHHHHHHHHHccCcEEEEec
Q 022982 187 LIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEa 206 (289)
.+.+.+.|++||+.||+=+
T Consensus 346 -~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 346 -SGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp -HHHHHHHHHTTCSEEEEST
T ss_pred -HHHHHHHHHcCCCeEEecH
Confidence 2455567889999999955
No 323
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=64.49 E-value=15 Score=32.13 Aligned_cols=121 Identities=20% Similarity=0.185 Sum_probs=72.1
Q ss_pred hHHHHHHHhhcc---cccE-EEecCccccccChhHHHHHHHHHHhCC-----ceecC-C-cHHHHHHHhCCch-------
Q 022982 41 NVLEDIFESMGQ---FVDG-LKFSGGSHSLMPKPFIEEVVKRAHQHD-----VYVST-G-DWAEHLIRNGPSA------- 102 (289)
Q Consensus 41 ~~~~DlLe~ag~---yID~-lKfg~GTs~l~p~~~l~eKI~l~~~~g-----V~v~~-G-tlfE~a~~qg~~~------- 102 (289)
..|+++|+.+.. .+.+ +|-.-+. .+...+...++.++++ |.++. - ..+..+-...|+.
T Consensus 98 ptL~evl~~~~~~~~~l~iEiK~~~~~----~~~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~ 173 (252)
T 3qvq_A 98 PTLLEAIEVISQYGMGLNLELKPCEGL----EEETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVS 173 (252)
T ss_dssp CBHHHHHHHHHHTTCEEEEEECCCTTC----HHHHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECS
T ss_pred cCHHHHHHHHhccCcEEEEEecCCCCc----cHHHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEe
Confidence 378888887642 2222 5632221 1222233345555544 33333 2 3455554444321
Q ss_pred --HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 103 --FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 103 --~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
-.++.+.++.+|++.+.++...++ .++|+.+++.|++|.+ .++.
T Consensus 174 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~-WTvn--------------------------- 219 (252)
T 3qvq_A 174 AIPSAWQERLEHLDCAGLHIHQSFFD------VQQVSDIKAAGYKVLA-FTIN--------------------------- 219 (252)
T ss_dssp SCCTTHHHHHHHHTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE-ECCC---------------------------
T ss_pred cCchhHHHHHHHcCCeEEecchhhCC------HHHHHHHHHCCCEEEE-EcCC---------------------------
Confidence 245677889999999988765443 3689999999988655 2331
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEe
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
| .+.+++.++.|+|.||..
T Consensus 220 --~----~~~~~~l~~~GVdgIiTD 238 (252)
T 3qvq_A 220 --D----ESLALKLYNQGLDAVFSD 238 (252)
T ss_dssp --C----HHHHHHHHHTTCCEEEES
T ss_pred --C----HHHHHHHHHcCCCEEEeC
Confidence 1 356788899999999875
No 324
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=64.38 E-value=6.9 Score=36.40 Aligned_cols=75 Identities=11% Similarity=0.102 Sum_probs=50.0
Q ss_pred cChhHHHHHHHHHHhCCceec--CCcHH--HHHHHh-CCchHH-HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 022982 67 MPKPFIEEVVKRAHQHDVYVS--TGDWA--EHLIRN-GPSAFK-EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (289)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV~v~--~Gtlf--E~a~~q-g~~~~~-~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (289)
+|-..++.-|+-+|++|++|. .||+- |.+-.. +.+++. .|.+.++++|||.|.|.=-.-. ..+.+.+.++.++
T Consensus 58 ~~~~~~~~~I~~~q~~G~kVllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~~-~~d~~~~aL~~l~ 136 (311)
T 2dsk_A 58 IPLEKFVDEVRELREIGGEVIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGI-DADKLADALLIVQ 136 (311)
T ss_dssp BCGGGGHHHHHHHHTTTCEEEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSCC-CHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCeEEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccCCc-cHHHHHHHHHHHH
Confidence 344678999999999999665 36542 222221 222344 4889999999999987533222 2367888888887
Q ss_pred Hc
Q 022982 141 SA 142 (289)
Q Consensus 141 ~~ 142 (289)
+.
T Consensus 137 ~~ 138 (311)
T 2dsk_A 137 RE 138 (311)
T ss_dssp HH
T ss_pred hh
Confidence 75
No 325
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=64.26 E-value=88 Score=29.31 Aligned_cols=127 Identities=15% Similarity=0.082 Sum_probs=0.0
Q ss_pred CchhHHHHHHHhhccc----ccEEEecCcc-------ccccChhHHHHHHHHHHhCC-----ceecCC-cHHHHHHHhCC
Q 022982 38 SSHNVLEDIFESMGQF----VDGLKFSGGS-------HSLMPKPFIEEVVKRAHQHD-----VYVSTG-DWAEHLIRNGP 100 (289)
Q Consensus 38 ~g~~~~~DlLe~ag~y----ID~lKfg~GT-------s~l~p~~~l~eKI~l~~~~g-----V~v~~G-tlfE~a~~qg~ 100 (289)
..+..+....+...+| .|++=+=.+| .....++.+.+.++-.++.- |++.|+ +.-|
T Consensus 136 ~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~------- 208 (354)
T 4ef8_A 136 LSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAH------- 208 (354)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHH-------
T ss_pred CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHH-------
Q ss_pred chHHHHHHHHHHcC-CCEEEecCCc-----ccCChh--------------------HHHHHHHHHHHcCCcccceeeeec
Q 022982 101 SAFKEYVEDCKQVG-FDTIELNVGS-----LEIPEE--------------------TLLRYVRLVKSAGLKAKPKFAVMF 154 (289)
Q Consensus 101 ~~~~~yl~~~k~lG-F~~IEISdGt-----i~i~~~--------------------~r~~lI~~~~~~G~~v~~E~g~k~ 154 (289)
+.+..+.+.+.| .|.|=++|.+ +++... .-.++|+++++. ..-+|=++.
T Consensus 209 --~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~-~~~ipII~~-- 283 (354)
T 4ef8_A 209 --FDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR-CPGKLIFGC-- 283 (354)
T ss_dssp --HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH-CTTSEEEEE--
T ss_pred --HHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh-CCCCCEEEE--
Q ss_pred CCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 155 NKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 155 ~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
|.+.+ .+.+.+.|++||+.|+|
T Consensus 284 -------------GGI~s---------------~~da~~~l~aGAd~V~v 305 (354)
T 4ef8_A 284 -------------GGVYT---------------GEDAFLHVLAGASMVQV 305 (354)
T ss_dssp -------------SCCCS---------------HHHHHHHHHHTEEEEEE
T ss_pred -------------CCcCC---------------HHHHHHHHHcCCCEEEE
No 326
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=63.97 E-value=4.8 Score=33.99 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=52.5
Q ss_pred HHHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022982 76 VKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (289)
Q Consensus 76 I~l~~~~gV-~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (289)
-++++++|| .+.- |--.++|+.+- .. .+.++||+.+=++|.+-..+++.....++.+++.|-.+.
T Consensus 117 ~~~L~~~gi~~lvv~G~~t~~CV~~T--a~-----da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 117 LNWLRQRGVDEVDVVGIATDHCVRQT--AE-----DAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCCEEEEEEecccHHHHHH--HH-----HHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 345577899 4554 77888888885 33 355799999999999999999999999999999887654
No 327
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=63.91 E-value=7.3 Score=38.09 Aligned_cols=48 Identities=23% Similarity=0.299 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+=|+++++|||++|++|- |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 346788999999999872 2211 1 3688999999999999999877644
No 328
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=63.64 E-value=17 Score=31.24 Aligned_cols=78 Identities=8% Similarity=0.019 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHhCCceecC-CcHH--------HHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc---CChhHH----
Q 022982 69 KPFIEEVVKRAHQHDVYVST-GDWA--------EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE---IPEETL---- 132 (289)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v~~-Gtlf--------E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~---i~~~~r---- 132 (289)
...+++.-++++++|+.++. ++++ +.+ . +.+++.++.|+.+|.+.|-+..|... .+.+.+
T Consensus 47 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~-~---~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~ 122 (286)
T 3dx5_A 47 YETTERELNCLKDKTLEITMISDYLDISLSADFEKT-I---EKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYV 122 (286)
T ss_dssp HHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHH-H---HHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHH-H---HHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHH
Confidence 45688888999999996654 2221 221 1 26889999999999999999887653 233333
Q ss_pred ---HHHHHHHHHcCCccccee
Q 022982 133 ---LRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 133 ---~~lI~~~~~~G~~v~~E~ 150 (289)
.++.+.+++.|.++.-|-
T Consensus 123 ~~l~~l~~~a~~~Gv~l~lE~ 143 (286)
T 3dx5_A 123 NRIRMICELFAQHNMYVLLET 143 (286)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCEEEEec
Confidence 345566777888766654
No 329
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=63.64 E-value=26 Score=30.57 Aligned_cols=19 Identities=26% Similarity=0.377 Sum_probs=15.1
Q ss_pred HHHHHHHHccCcEEEEecc
Q 022982 189 RRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEar 207 (289)
+++...+++|||-|++=+.
T Consensus 214 e~~~~~~~~GAdgvvVGSa 232 (262)
T 1rd5_A 214 EHVKQIAQWGADGVIIGSA 232 (262)
T ss_dssp HHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEChH
Confidence 5666778899999998664
No 330
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=63.63 E-value=44 Score=28.12 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=59.1
Q ss_pred ccEEEecCccc--cccChhHHHHHHHHHHhCCceecC-Cc--HH----HHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 022982 54 VDGLKFSGGSH--SLMPKPFIEEVVKRAHQHDVYVST-GD--WA----EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (289)
Q Consensus 54 ID~lKfg~GTs--~l~p~~~l~eKI~l~~~~gV~v~~-Gt--lf----E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (289)
.|.+=+..... ...+...+++.-++++++|+.+.. .+ .+ +. ..+ .+++.++.|+++|.+.|=+..|.
T Consensus 33 ~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~-~~~---~~~~~i~~a~~lG~~~v~~~~g~ 108 (272)
T 2q02_A 33 FNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEE-VVK---KTEGLLRDAQGVGARALVLCPLN 108 (272)
T ss_dssp CCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHH-HHH---HHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHH-HHH---HHHHHHHHHHHhCCCEEEEccCC
Confidence 45555543221 222345688888999999998743 22 11 22 222 68999999999999999987665
Q ss_pred ccCC------hhHHHHHHHHHHHcCCccccee
Q 022982 125 LEIP------EETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 125 i~i~------~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
..-. .+...++.+.+++.|.++.-|-
T Consensus 109 ~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~ 140 (272)
T 2q02_A 109 DGTIVPPEVTVEAIKRLSDLFARYDIQGLVEP 140 (272)
T ss_dssp SSBCCCHHHHHHHHHHHHHHHHTTTCEEEECC
T ss_pred CchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 3210 3344466677778888755554
No 331
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=63.63 E-value=10 Score=33.44 Aligned_cols=50 Identities=12% Similarity=0.075 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceeee
Q 022982 103 FKEYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
.++.++.++++||++|-|.-+ ...=+.+...++|+.+.++|++|+-+++-
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 456677778888888777422 11123445567888888888888776653
No 332
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=63.59 E-value=7.5 Score=40.91 Aligned_cols=50 Identities=16% Similarity=0.395 Sum_probs=39.9
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------------C-----cccCC---------hhHHHHHHHHHHHcCCcccceee
Q 022982 103 FKEYVEDCKQVGFDTIELNV-----------------G-----SLEIP---------EETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------------G-----ti~i~---------~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
+.+-+.++++|||++|+++= | ...++ .++..++|+.+.++|++|+-.+-
T Consensus 635 i~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 635 IAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 44558899999999999972 2 13444 78999999999999999987775
Q ss_pred e
Q 022982 152 V 152 (289)
Q Consensus 152 ~ 152 (289)
.
T Consensus 715 ~ 715 (844)
T 3aie_A 715 P 715 (844)
T ss_dssp C
T ss_pred c
Confidence 5
No 333
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=63.48 E-value=13 Score=33.06 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=50.8
Q ss_pred chHHHHHHHHHHcCCCEEEecC-CcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCC
Q 022982 101 SAFKEYVEDCKQVGFDTIELNV-GSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISd-Gti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~ 177 (289)
+.+..|-..++-+||..|=+.. |+. . -.++|+++++. ...+.-.+|++.
T Consensus 140 e~~~~~a~~a~~~g~~~VYld~sG~~--~---~~~~i~~i~~~~~~~Pv~vGGGI~t----------------------- 191 (228)
T 3vzx_A 140 DDIVAYARVSELLQLPIFYLEYSGVL--G---DIEAVKKTKAVLETSTLFYGGGIKD----------------------- 191 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTSC--C---CHHHHHHHHHHCSSSEEEEESSCCS-----------------------
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCc--C---CHHHHHHHHHhcCCCCEEEeCCCCC-----------------------
Confidence 3567888888888888876644 332 1 25778887775 345555666621
Q ss_pred ccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHh
Q 022982 178 TEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 226 (289)
Q Consensus 178 ~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~ 226 (289)
.+++++.+ +|||.|+|=+- +++ +.+.+.++++
T Consensus 192 ----------~e~a~~~~-~gAD~VVVGSa-~v~-----~p~~~~~~v~ 223 (228)
T 3vzx_A 192 ----------AETAKQYA-EHADVIVVGNA-VYE-----DFDRALKTVA 223 (228)
T ss_dssp ----------HHHHHHHH-TTCSEEEECTH-HHH-----CHHHHHHHHH
T ss_pred ----------HHHHHHHH-hCCCEEEEChH-Hhc-----CHHHHHHHHH
Confidence 35566656 79999999653 222 2455555554
No 334
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=63.37 E-value=16 Score=32.95 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=33.2
Q ss_pred HHHHHHHHccCcEEEEecc-----ccccCCCCccHHHHHHHHhcc
Q 022982 189 RRAERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEar-----GI~d~~G~~r~d~v~~ii~~l 228 (289)
..++....+||+=||||.- -+.|..-.+..+.+.++++.+
T Consensus 211 ~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i 255 (262)
T 1zco_A 211 PLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKEL 255 (262)
T ss_dssp HHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHH
Confidence 3355678999999999984 577999999999999998754
No 335
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=63.31 E-value=12 Score=31.96 Aligned_cols=39 Identities=23% Similarity=0.246 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcc-c-CChhHHHHHHHHHHHc
Q 022982 102 AFKEYVEDCKQVGFDTIELN--VGSL-E-IPEETLLRYVRLVKSA 142 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS--dGti-~-i~~~~r~~lI~~~~~~ 142 (289)
.+.+-++.+.+.|.++||+- ||.. . ++ .-.+.++.+++.
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~--~~~~~i~~l~~~ 66 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT--IGPLVVDSLRPI 66 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC--CCHHHHHHHGGG
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccc--cCHHHHHHHHhc
Confidence 66778888999999999996 5532 1 22 224677777663
No 336
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=63.31 E-value=26 Score=31.01 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=78.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDL 186 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
..+++++|.++|-+-----.+...+-.+.++.+.+.||.|+-|+|=.
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~--------------------------------- 124 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDP--------------------------------- 124 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSH---------------------------------
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCH---------------------------------
Confidence 78899999999999877766777778899999999999999998861
Q ss_pred HHHHHHHHHHccCcEEEEeccccccCCC----CccHHHHH---HHHhccC-CCceEEecCCc-hhHHHHHHHhCCCccc
Q 022982 187 LIRRAERCLEAGADMIMIDSDDVCKHAD----SLRADIIA---KVIGRLG-LEKTMFEATNP-RTSEWFIRRYGPKVNL 256 (289)
Q Consensus 187 ~I~~~~~dLeAGA~~ViiEarGI~d~~G----~~r~d~v~---~ii~~l~-~eklifEAP~k-~qQ~~~I~~fG~~VNL 256 (289)
.+.++..+.++..|=+|-+-.-- .| ....|.++ +++..++ --+++-|.--+ .....++...|.|-=|
T Consensus 125 --~e~~~~~~~~~~iIayep~waiG-tG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~L 200 (226)
T 1w0m_A 125 --RTSLAAAALGPHAVAVEPPELIG-TGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVL 200 (226)
T ss_dssp --HHHHHHHHTCCSEEEECCGGGTT-TSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred --HHHHHHhcCCCCEEEEcChhhhc-cCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEE
Confidence 01122356688888899884332 22 33344333 3444444 34678888744 5667777777666444
No 337
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=63.17 E-value=21 Score=33.30 Aligned_cols=41 Identities=27% Similarity=0.491 Sum_probs=32.6
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecC
Q 022982 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 238 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP 238 (289)
.++++..++||||.||++ |+..+.+.+.++.+. .++..||.
T Consensus 217 l~e~~eAl~aGaDiImLD---------n~s~~~l~~av~~~~-~~v~leaS 257 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILLD---------NMSISEIKKAVDIVN-GKSVLEVS 257 (300)
T ss_dssp HHHHHHHHHTTCSEEEEE---------SCCHHHHHHHHHHHT-TSSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEC---------CCCHHHHHHHHHhhc-CceEEEEE
Confidence 478888899999999995 567788888887665 46777776
No 338
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=63.17 E-value=1.8 Score=38.35 Aligned_cols=95 Identities=9% Similarity=0.046 Sum_probs=63.1
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (289)
.+....++++.+|+|+|++|++..-..-+..+ -|+.++++|..+..-- =+.-.|+.+..|++.+.++|.|+|
T Consensus 25 ~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~----~v~~lr~~~~~v~lD~----kl~Dip~t~~~~i~~~~~~Gad~v 96 (245)
T 1eix_A 25 NRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQ----FVRELQQRGFDIFLDL----KFHDIPNTAAHAVAAAADLGVWMV 96 (245)
T ss_dssp SHHHHHHHHTTSCTTTCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEEEE----EECSCHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHhCccCcEEEEcHHHHHHhCHH----HHHHHHHCCCcEEEEe----eccccHHHHHHHHHHHHhCCCCEE
Confidence 45677888899999999999997665333333 3444566654443321 111223456679999999999999
Q ss_pred EecCCcccCChhHHHHHHHHHHHcCC
Q 022982 119 ELNVGSLEIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~G~ 144 (289)
-|.-- ...+...++++.+++.|.
T Consensus 97 TvH~~---~g~~~l~~~~~~~~~~G~ 119 (245)
T 1eix_A 97 NVHAS---GGARMMTAAREALVPFGK 119 (245)
T ss_dssp EEBGG---GCHHHHHHHHHTTGGGGG
T ss_pred EEecc---CCHHHHHHHHHHHHHcCC
Confidence 99853 234545678888887765
No 339
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=63.14 E-value=5.2 Score=38.53 Aligned_cols=24 Identities=4% Similarity=0.106 Sum_probs=19.6
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCcc
Q 022982 102 AFKEYVEDCKQ-VGFDTIELNVGSL 125 (289)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGti 125 (289)
...++.+.+.+ .|+|+|+||.|+.
T Consensus 265 d~~~la~~L~~~~Gvd~I~vs~g~~ 289 (419)
T 3l5a_A 265 EFNQLIDWVMDVSNIQYLAIASWGR 289 (419)
T ss_dssp HHHHHHHHHHHHSCCCCEEECCTTC
T ss_pred HHHHHHHHHHhhcCCcEEEEeeCCc
Confidence 35567777888 9999999999875
No 340
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=63.06 E-value=8.5 Score=36.68 Aligned_cols=44 Identities=27% Similarity=0.420 Sum_probs=35.1
Q ss_pred HHHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHcCCccc
Q 022982 104 KEYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAK 147 (289)
Q Consensus 104 ~~yl~~~k~l-GF~~IEISdGti----~i~~~~r~~lI~~~~~~G~~v~ 147 (289)
+..++.++++ ||+.||++-..+ ..+.++..++-+.++++||.+.
T Consensus 33 ~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~ 81 (386)
T 3bdk_A 33 PVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEIT 81 (386)
T ss_dssp SSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3478889999 999999985433 3566788889999999999864
No 341
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=63.05 E-value=32 Score=32.41 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHHHHccCcEEEEecc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
+.++.++.++..-++|+++|-+=++
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4677888888888999999988554
No 342
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=62.93 E-value=7.4 Score=38.77 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=36.9
Q ss_pred HHHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 106 YVEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 106 yl~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
=|.++|+||+++|+++= |.- .+ +.++..+||+.+.++|++|+-.+-.
T Consensus 244 kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 244 KIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp THHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecc
Confidence 36788999999999973 211 11 4688999999999999999887755
No 343
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=62.83 E-value=9.8 Score=34.00 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=57.0
Q ss_pred hHHHHHHHhhcccccEE-EecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 41 NVLEDIFESMGQFVDGL-KFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~l-Kfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
.+.++-++.-++=||++ =+|+-.+ .-.+.+++-.+.|+++|+++- -.+|.++.. ++.+..-.+.|.++|-|.|-
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~--~v~~ei~~v~~a~~~~g~~lK--vIlEt~~L~-~e~i~~a~ria~eaGADfVK 166 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPE--AVYREVSGIVKLAKSYGAVVK--VILEAPLWD-DKTLSLLVDSSRRAGADIVK 166 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHH--HHHHHHHHHHHHHHHTTCEEE--EECCGGGSC-HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeccchHHHH--HHHHHHHHHHHHHhhcCCeEE--EEEeccCCC-HHHHHHHHHHHHHhCCCEEE
Confidence 46788899999999994 4565444 223468888888999887531 112222222 34677788889999999999
Q ss_pred ecCCccc
Q 022982 120 LNVGSLE 126 (289)
Q Consensus 120 ISdGti~ 126 (289)
.|.|+..
T Consensus 167 TsTG~~~ 173 (234)
T 1n7k_A 167 TSTGVYT 173 (234)
T ss_dssp SCCSSSC
T ss_pred eCCCCCC
Confidence 9999864
No 344
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=62.79 E-value=80 Score=28.86 Aligned_cols=92 Identities=11% Similarity=0.074 Sum_probs=54.5
Q ss_pred hhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCcccCChhHHHHHHHHHHHc--
Q 022982 69 KPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLEIPEETLLRYVRLVKSA-- 142 (289)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v--~~GtlfE~a~~qg~~~~~~yl~~~k~lG--F~~IEISdGti~i~~~~r~~lI~~~~~~-- 142 (289)
++.+++.++.+++.|+.+ ..|.-- ..-+..+.+.+.| +++|+++-.. . ......+.|+.+++.
T Consensus 80 ~~~~~~~i~~~~~~g~~v~v~~g~~~---------~~~~~a~~~~~~g~~~~~i~i~~~~-G-~~~~~~~~i~~lr~~~~ 148 (336)
T 1ypf_A 80 PEKRISFIRDMQSRGLIASISVGVKE---------DEYEFVQQLAAEHLTPEYITIDIAH-G-HSNAVINMIQHIKKHLP 148 (336)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEECCSH---------HHHHHHHHHHHTTCCCSEEEEECSS-C-CSHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHhcCCeEEEeCCCCH---------HHHHHHHHHHhcCCCCCEEEEECCC-C-CcHHHHHHHHHHHHhCC
Confidence 345777788888777532 223211 1113355667778 9999985321 1 334455788888775
Q ss_pred CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEe
Q 022982 143 GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 143 G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
+..| .+.+ .. + .+.+++.+++|||.|++-
T Consensus 149 ~~~v----i~G~---------------v~-----------s----~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 149 ESFV----IAGN---------------VG-----------T----PEAVRELENAGADATKVG 177 (336)
T ss_dssp TSEE----EEEE---------------EC-----------S----HHHHHHHHHHTCSEEEEC
T ss_pred CCEE----EECC---------------cC-----------C----HHHHHHHHHcCCCEEEEe
Confidence 2221 1100 01 1 478889999999999993
No 345
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=62.57 E-value=45 Score=31.67 Aligned_cols=170 Identities=12% Similarity=0.131 Sum_probs=96.6
Q ss_pred chhHHHHHHHhhccccc--EEEecCcccccc---Ch-h-------------HHHHHHHHHHhCCceecC----C-c----
Q 022982 39 SHNVLEDIFESMGQFVD--GLKFSGGSHSLM---PK-P-------------FIEEVVKRAHQHDVYVST----G-D---- 90 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID--~lKfg~GTs~l~---p~-~-------------~l~eKI~l~~~~gV~v~~----G-t---- 90 (289)
+...++.+|+.|-+.=- +|-++-|+...+ +- . ...--..++++++|+|.. | +
T Consensus 38 n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~~~~ 117 (358)
T 1dos_A 38 GTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLP 117 (358)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCccHH
Confidence 45566666665543211 456666654333 10 1 133444577889999985 5 3
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCccccc
Q 022982 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRA 166 (289)
Q Consensus 91 lfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~ 166 (289)
|++.++.- .++|++.+-+.||+.|=|.--. +|.++= .++++++...|.-|--|+|.=-+ .+|..
T Consensus 118 ~i~~~i~a----~~~~~~~~~~~gFtSVMiDgS~--~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG------~EDgv 185 (358)
T 1dos_A 118 WIDGLLDA----GEKHFAATGKPLFSSHMIDLSE--ESLQENIEICSKYLERMSKIGMTLEIELGCTGG------EEDGV 185 (358)
T ss_dssp HHHHHHHH----HHHHHHHHSSCSCSEEEECCTT--SCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCC------CCCCC
T ss_pred HHHHHHHH----HHHHHHhcccCCCceEeecCCC--CCHHHHHHHHHHHHHHHHHcCCEEEEEeccccC------cCCCc
Confidence 36666544 3678888888889999886554 444443 46778888899999999998321 12210
Q ss_pred cccccccCCCCccccccHHHHHHHHHHHHHccCc--EEEEec----ccccc-CCCCccHHHHHHHHh
Q 022982 167 FGAYVARAPRSTEYVEDVDLLIRRAERCLEAGAD--MIMIDS----DDVCK-HADSLRADIIAKVIG 226 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~--~ViiEa----rGI~d-~~G~~r~d~v~~ii~ 226 (289)
- . .... .+....||++..+.+++- -|.| .-+.=| -|+|. .+-.++.+.+.+|-+
T Consensus 186 ~-~--~~~~-~~~~yT~Peea~~fv~~t--tgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~ 246 (358)
T 1dos_A 186 D-N--SHMD-ASALYTQPEDVDYAYTEL--SKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQE 246 (358)
T ss_dssp S-C--CCCC-CCCCSCCHHHHHHHHHHH--HTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHH
T ss_pred c-c--cccc-cccccCCHHHHHHHHHHh--cCCChhceEEEecccccCccCCCCCCcCHHHHHHHHH
Confidence 0 0 0000 000112677766666531 2555 122222 28994 566788888887754
No 346
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=62.49 E-value=11 Score=35.51 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=37.9
Q ss_pred chHHHHHHHHHHcCCCEEEecCCccc---C---------------C---hhHHHHHHHHHHHcCCcccceee
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSLE---I---------------P---EETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~---i---------------~---~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
+.+++.++.+|++||++|-++ ++-. + + .+..-++|..+.++|++|+-++.
T Consensus 62 ~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 62 DRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 468999999999999999998 2211 1 1 12223799999999999998765
No 347
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=62.35 E-value=7.1 Score=34.95 Aligned_cols=47 Identities=9% Similarity=0.120 Sum_probs=36.5
Q ss_pred HHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecC
Q 022982 190 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 238 (289)
Q Consensus 190 ~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP 238 (289)
.+++.| +||++|++-+.= ..++|++|.+.+.++++.++-++++.=..
T Consensus 89 ~~~~~l-~Ga~~Viigs~a-~~~~g~~~p~~~~~~~~~~g~~~ivv~iD 135 (260)
T 2agk_A 89 NCLEWL-KWASKVIVTSWL-FTKEGHFQLKRLERLTELCGKDRIVVDLS 135 (260)
T ss_dssp THHHHT-TTCSCEEECGGG-BCTTCCBCHHHHHHHHHHHCGGGEEEEEE
T ss_pred HHHHHh-cCCCEEEECcHH-HhhcCCCCHHHHHHHHHHhCcCcEEEEEE
Confidence 567788 999999987663 34448999999999999998677654443
No 348
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=62.35 E-value=12 Score=34.59 Aligned_cols=106 Identities=15% Similarity=0.187 Sum_probs=60.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
+.++++.+++++.||.+|=|+-+.+.. .-+.++..+.+|.+=+| ||.+.
T Consensus 74 ~dI~~lc~eA~~~g~aaVCV~P~~V~~-------a~~~L~~s~V~V~tVig--FP~G~---------------------- 122 (288)
T 3oa3_A 74 SQIDVLCAEAKEYGFATVCVRPDYVSR-------AVQYLQGTQVGVTCVIG--FHEGT---------------------- 122 (288)
T ss_dssp HHHHHHHHHHHHHTCSEEEECGGGHHH-------HHHHTTTSSCEEEEEES--TTTSC----------------------
T ss_pred HHHHHHHHHHHhcCCcEEEECHHHHHH-------HHHHcCCCCCeEEEEeC--CCCCC----------------------
Confidence 368888889999999998887555432 12223444555555333 44321
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEecc-c-cccCCCCccHHHHHHHHhccC--CCceEEecC
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSD-D-VCKHADSLRADIIAKVIGRLG--LEKTMFEAT 238 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEar-G-I~d~~G~~r~d~v~~ii~~l~--~eklifEAP 238 (289)
.+.+-.+.+++..+++||+-|=+==. | +-+.+.+--.++|..+.+..+ +=|+|+|..
T Consensus 123 -~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~ 183 (288)
T 3oa3_A 123 -YSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETS 183 (288)
T ss_dssp -SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGG
T ss_pred -CcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECC
Confidence 12455688888888999887643221 2 222222222344555555443 357888875
No 349
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=62.09 E-value=51 Score=28.52 Aligned_cols=92 Identities=12% Similarity=0.005 Sum_probs=57.5
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
.+....++++..++|+|++|+|.+-+.-+..+.+++.-+.+. |-.++.-- +.+ -=..+.+.+.++|.|.
T Consensus 16 ~~~~a~~~~~~~~~~~~~ikvg~~lf~~~G~~~v~~l~~~~p--~~~iflDlKl~D--------ip~t~~~~~~~~Gad~ 85 (221)
T 3exr_A 16 NLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRSLFP--DKIIVADTKCAD--------AGGTVAKNNAVRGADW 85 (221)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHCT--TSEEEEEEEECS--------CHHHHHHHHHTTTCSE
T ss_pred CHHHHHHHHHhhCCCceEEEECHHHHHhcCHHHHHHHHHhCC--CCcEEEEEEeec--------cHHHHHHHHHHcCCCE
Confidence 566888999999999999999888776666665555433211 33333210 111 1111223367899999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcC
Q 022982 118 IELNVGSLEIPEETLLRYVRLVKSAG 143 (289)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G 143 (289)
|-|.... +.+...++++.+++.|
T Consensus 86 vtVH~~~---g~~~l~~a~~~~~~~g 108 (221)
T 3exr_A 86 MTCICSA---TIPTMKAARKAIEDIN 108 (221)
T ss_dssp EEEETTS---CHHHHHHHHHHHHHHC
T ss_pred EEEeccC---CHHHHHHHHHHHHhcC
Confidence 8886532 2455667888888766
No 350
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=62.08 E-value=10 Score=34.32 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=60.3
Q ss_pred chhHHHHHHHhhcccc-cEEEecCccccccChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 39 SHNVLEDIFESMGQFV-DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 39 g~~~~~DlLe~ag~yI-D~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
......++++..++|+ +++|.|.--..-+..+.+ +.+++.|..|..- =+..+ |+-+..|.+.+.++|.|
T Consensus 15 ~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G~~~v----~~Lk~~g~~VflDlK~~DI-----pnTv~~a~~~~~~~gad 85 (259)
T 3tfx_A 15 NEEQLNKILSKLGDPHDVFVKVGMELFYNAGIDVI----KKLTQQGYKIFLDLKMHDI-----PNTVYNGAKALAKLGIT 85 (259)
T ss_dssp CHHHHHHHHHTTCCGGGCEEEECHHHHHHHCHHHH----HHHHHTTCEEEEEEEECSC-----HHHHHHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHhCcccceEEEeCHHHHHhcCHHHH----HHHHHCCCcEEEEeccccc-----chHHHHHHHHHHhcCCC
Confidence 5778899999999999 999999755544444433 3345556666542 12221 23556677888999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHH
Q 022982 117 TIELNVGSLEIPEETLLRYVRLVKS 141 (289)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~ 141 (289)
+|-|+- ....+....+++.+++
T Consensus 86 ~vTVh~---~~G~~~~~aa~~~~~~ 107 (259)
T 3tfx_A 86 FTTVHA---LGGSQMIKSAKDGLIA 107 (259)
T ss_dssp EEEEEG---GGCHHHHHHHHHHHHH
T ss_pred EEEEcC---CCCHHHHHHHHHHHHH
Confidence 999964 2345555566666654
No 351
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=62.02 E-value=9.9 Score=35.53 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=40.0
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceec
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~ 87 (289)
......++++..++|++++|.|.--..-+..+.+++..++++.+|..+.
T Consensus 94 ~~~~al~l~~~l~~~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~g~~If 142 (312)
T 3g3d_A 94 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 142 (312)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhCCCEEE
Confidence 5678899999999999999999777776777888888888777776554
No 352
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=61.96 E-value=14 Score=34.33 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCEEEec---------CCc------ccCChhHHHHHHHHHHHcCCcccceeeee
Q 022982 104 KEYVEDCKQVGFDTIELN---------VGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVM 153 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS---------dGt------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (289)
.+-++.++++|+++|-|. .+. -+.+.+.-.++|++|+++||+|.-++.+-
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~ 120 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVN 120 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEee
Confidence 467888899999999883 111 12467778899999999999998877774
No 353
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=61.95 E-value=16 Score=34.01 Aligned_cols=141 Identities=13% Similarity=0.173 Sum_probs=77.1
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHh-CCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ-HDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~-~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+....++++..++|++++|.|.--..-+-.+.+ +.+++ +|..+..-- +..+ |+-+..|.+.+.++|.|
T Consensus 35 ~~~eal~l~~~l~~~v~~vKVG~~lf~~~G~~~V----~~Lk~~~g~~IflDlKl~DI-----pnTv~~av~~~a~lGaD 105 (303)
T 3ru6_A 35 TKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI----EELKKVDDFKIFLDLKFHDI-----PNTMADACEEVSKLGVD 105 (303)
T ss_dssp SHHHHHHHHHHTTTSSCEEEECHHHHHHHTHHHH----HHHHHHCCCEEEEEEEECSC-----HHHHHHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHhCCCccEEEeCHHHHHHhCHHHH----HHHHHhhCCCEEEEeeeccC-----chhHHHHHHHHHhcCCC
Confidence 5678889999999999999997322111222333 33333 355544321 2111 23456677788999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCcccce-eeeecCCCCCCCccccccccccccCCCCcccccc-HHHHHHHHHHH
Q 022982 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPK-FAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVED-VDLLIRRAERC 194 (289)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E-~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~-~~~~I~~~~~d 194 (289)
+|-|.- ....+....+++.+++.|=. |. ++|-- .+..+ ...+.. +.. .+ .+..++.++..
T Consensus 106 ~vTVHa---~~G~~~m~aa~e~a~~~~~~--~~llaVtv-LTS~s---~~~l~~-l~~--------~~~~e~V~~lA~~a 167 (303)
T 3ru6_A 106 MINIHA---SAGKIAIQEVMTRLSKFSKR--PLVLAVSA-LTSFD---EENFFS-IYR--------QKIEEAVINFSKIS 167 (303)
T ss_dssp EEEEEG---GGCHHHHHHHHHHHTTSSSC--CEEEEECS-CTTCC---HHHHHH-HHS--------SCHHHHHHHHHHHH
T ss_pred EEEEec---cCCHHHHHHHHHHHHhcCCC--ceEEEEEE-ecCCC---HHHHHH-HHc--------CCHHHHHHHHHHHH
Confidence 999854 33455666666666554311 12 23311 11111 111100 000 11 24456777778
Q ss_pred HHccCcEEEEec
Q 022982 195 LEAGADMIMIDS 206 (289)
Q Consensus 195 LeAGA~~ViiEa 206 (289)
.++|.+-|+.=+
T Consensus 168 ~~~G~dGvV~s~ 179 (303)
T 3ru6_A 168 YENGLDGMVCSV 179 (303)
T ss_dssp HHTTCSEEECCT
T ss_pred HHcCCCEEEECH
Confidence 899999988744
No 354
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=61.92 E-value=20 Score=33.58 Aligned_cols=90 Identities=14% Similarity=0.199 Sum_probs=54.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.++.+.+.+.|.++|++|.++..-....-..+++.+++. +. .|=++. | . +
T Consensus 253 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-~~-iPvi~~-------G--------g-----------i- 303 (364)
T 1vyr_A 253 ALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-FH-GVIIGA-------G--------A-----------Y- 303 (364)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CC-SEEEEE-------S--------S-----------C-
T ss_pred HHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-CC-CCEEEE-------C--------C-----------c-
Confidence 4456777788899999999975421111113566666663 11 121111 1 1 1
Q ss_pred cHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 183 DVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
+ .+.+++.|++| ||.|++ +|+++.+ .+++.++.+..++.
T Consensus 304 t----~~~a~~~l~~g~aD~V~~-gR~~l~~-----P~~~~~~~~g~~l~ 343 (364)
T 1vyr_A 304 T----AEKAEDLIGKGLIDAVAF-GRDYIAN-----PDLVARLQKKAELN 343 (364)
T ss_dssp C----HHHHHHHHHTTSCSEEEE-SHHHHHC-----TTHHHHHHHTCCCC
T ss_pred C----HHHHHHHHHCCCccEEEE-CHHHHhC-----hhHHHHHHcCCCCC
Confidence 1 57788889998 999988 6665542 56788887665543
No 355
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=61.89 E-value=29 Score=33.08 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=35.7
Q ss_pred HHHHHHHHHccCcEEEEec-----cccccCCCCccHHHHHHHHhcc
Q 022982 188 IRRAERCLEAGADMIMIDS-----DDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEa-----rGI~d~~G~~r~d~v~~ii~~l 228 (289)
...+...+.+||+-+|||- +.++|..-.+..+.+.++++.+
T Consensus 329 ~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i 374 (385)
T 3nvt_A 329 LPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAI 374 (385)
T ss_dssp HHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHH
Confidence 4678889999999999998 3679999999999999998765
No 356
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=61.64 E-value=6.3 Score=37.97 Aligned_cols=147 Identities=11% Similarity=0.084 Sum_probs=89.4
Q ss_pred HHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHcCCcccceeeee
Q 022982 79 AHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAVM 153 (289)
Q Consensus 79 ~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (289)
-+..||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||+|...+..+
T Consensus 26 M~~LGiSvYp~~~~~~--------~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~ 97 (385)
T 1x7f_A 26 ERKLGISLYPEHSTKE--------KDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPA 97 (385)
T ss_dssp CCEEEEEECGGGSCHH--------HHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHheEEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 34568888887 4554 3348999999999998865543322 223556788999999999988877663
Q ss_pred cCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc--------------c--cccCCCCcc
Q 022982 154 FNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD--------------D--VCKHADSLR 217 (289)
Q Consensus 154 ~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar--------------G--I~d~~G~~r 217 (289)
. ....|..- +..+..-+.|++-+-+.-- | |.=+.-+ .
T Consensus 98 ~-~~~Lg~s~-------------------------~dl~~f~~lGi~gLRLD~Gf~~~eia~ls~n~~glkIeLNASt-~ 150 (385)
T 1x7f_A 98 V-FDQLGISY-------------------------SDLSFFAELGADGIRLDVGFDGLTEAKMTNNPYGLKIELNVSN-D 150 (385)
T ss_dssp C-C------C-------------------------CCTHHHHHHTCSEEEESSCCSSHHHHHHTTCTTCCEEEEETTS-C
T ss_pred H-HHHcCCCH-------------------------HHHHHHHHcCCCEEEEcCCCCHHHHHHHhcCCCCCEEEEeCcC-C
Confidence 3 22222110 1112344669999988762 2 2223334 6
Q ss_pred HHHHHHHHhc-cCCCceEEec-----CCch---------hHHHHHHHhCCCcccccCCCC
Q 022982 218 ADIIAKVIGR-LGLEKTMFEA-----TNPR---------TSEWFIRRYGPKVNLFVDHSQ 262 (289)
Q Consensus 218 ~d~v~~ii~~-l~~eklifEA-----P~k~---------qQ~~~I~~fG~~VNLgI~~~e 262 (289)
++.++.|++. ...++| +| |+|. ++...+++||-+|=-||+-..
T Consensus 151 ~~~l~~l~~~~~n~~~l--~acHNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~ 208 (385)
T 1x7f_A 151 IAYLENILSHQANKSAL--IGCHNFYPQKFTGLPYDYFIRCSERFKKHGIRSAAFITSHV 208 (385)
T ss_dssp SSHHHHHTTSSCCGGGE--EEECCCBCSTTCSBCHHHHHHHHHHHHHTTCCCEEEECCSS
T ss_pred HHHHHHHHHcCCChHHe--EEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 7778888753 335664 33 3332 377888999987776677543
No 357
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=61.50 E-value=10 Score=31.82 Aligned_cols=42 Identities=7% Similarity=0.116 Sum_probs=27.4
Q ss_pred chHHHHHHHHHHcCCCEEEecC--CcccCChhHHHHHHHHHHHc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLRYVRLVKSA 142 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~lI~~~~~~ 142 (289)
..+.+-++.+.+.|.+++++-. |+.......=.+.++.+++.
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~ 59 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH 59 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh
Confidence 3677888999999999977764 76333211113566666664
No 358
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=61.37 E-value=5.5 Score=39.74 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc---------CChhHHHHHHHHHHH
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLE---------IPEETLLRYVRLVKS 141 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~---------i~~~~r~~lI~~~~~ 141 (289)
..++.+.+.+.|.|+|++|.|+.+ .+.....++++.+++
T Consensus 230 ~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (671)
T 1ps9_A 230 TVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKG 277 (671)
T ss_dssp HHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHH
Confidence 445667778889999999977642 122234567777766
No 359
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=61.31 E-value=8.9 Score=38.24 Aligned_cols=129 Identities=14% Similarity=0.136 Sum_probs=74.7
Q ss_pred HHHHHHHHcCCCEEEecC----------CcccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 022982 105 EYVEDCKQVGFDTIELNV----------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d 164 (289)
+-|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-...-. .+.
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~-----~~~ 222 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFG-----PSG 222 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCC-----SSS
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccc-----cCC
Confidence 346788999999999862 22211 26889999999999999999887553211 011
Q ss_pred ccccc----cc---ccCCCCc----cccccHHHHHHHHHHHH-HccCcEEEEecc-ccccCC-CCccHHHHHHHHhccCC
Q 022982 165 RAFGA----YV---ARAPRST----EYVEDVDLLIRRAERCL-EAGADMIMIDSD-DVCKHA-DSLRADIIAKVIGRLGL 230 (289)
Q Consensus 165 ~~~~~----~~---~~~~~~~----~~~~~~~~~I~~~~~dL-eAGA~~ViiEar-GI~d~~-G~~r~d~v~~ii~~l~~ 230 (289)
..+.. +. .+..|.. +...-.+.+++.++..+ +.|+|=.-+.+= .+.+.. ..+-.++.+. +...+-
T Consensus 223 ~~~~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvDGfR~D~~~~i~~~~~~~fl~~~~~~-v~~~~~ 301 (602)
T 2bhu_A 223 NYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQE-IHELGG 301 (602)
T ss_dssp CCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHH-HHTTCS
T ss_pred ccccccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCEEEEechHhhhccchHHHHHHHHHH-HhhcCC
Confidence 10100 00 0122321 11112467788888999 589999999885 344432 1222222222 233344
Q ss_pred CceEEecCC
Q 022982 231 EKTMFEATN 239 (289)
Q Consensus 231 eklifEAP~ 239 (289)
-.+|-|...
T Consensus 302 ~~li~E~~~ 310 (602)
T 2bhu_A 302 THLLLAEDH 310 (602)
T ss_dssp CCEEEEECS
T ss_pred eEEEEEeCC
Confidence 567788763
No 360
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=61.22 E-value=8.3 Score=38.96 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecCCcc-------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNVGSL-------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti-------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+++++|||++|.++-=+- .+ +.++..+||+.+.++|++|+-.+-.
T Consensus 271 LdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 271 IDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp HHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 6678999999999973111 11 3688999999999999999877643
No 361
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=61.19 E-value=18 Score=33.79 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=55.0
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE 182 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~ 182 (289)
+.++.+.+.+.|.++|++|.++..=....-.++++.+++. +. +|=++. | . +
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~-~~-iPvi~~-------G--------g-----------i- 302 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREA-YQ-GVLIYA-------G--------R-----------Y- 302 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CC-SEEEEE-------S--------S-----------C-
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHH-CC-CcEEEe-------C--------C-----------C-
Confidence 4456677788899999999986421111112566666663 11 122222 1 1 1
Q ss_pred cHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 183 DVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
+ .+.+++.|++| ||.|++ +|+++.+ .+++.++.+..++.
T Consensus 303 ~----~~~a~~~l~~g~aD~V~i-gR~~i~~-----P~l~~~~~~g~~l~ 342 (365)
T 2gou_A 303 N----AEKAEQAINDGLADMIGF-GRPFIAN-----PDLPERLRHGYPLA 342 (365)
T ss_dssp C----HHHHHHHHHTTSCSEEEC-CHHHHHC-----TTHHHHHHHTCCCC
T ss_pred C----HHHHHHHHHCCCcceehh-cHHHHhC-----chHHHHHHcCCCCC
Confidence 1 46778889999 999988 6665532 56788887765543
No 362
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=61.12 E-value=18 Score=32.25 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=75.5
Q ss_pred hHHHHHHHhhcccccEE-EecC---ccccccChhHHHHHHHHHHhCCceecCCcHHHHHHH---hCCchHHHHHHHHHHc
Q 022982 41 NVLEDIFESMGQFVDGL-KFSG---GSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIR---NGPSAFKEYVEDCKQV 113 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~l-Kfg~---GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~---qg~~~~~~yl~~~k~l 113 (289)
.+.++-++.-++=||++ -+|+ |..-..-+ .+++-.+.|+..-++|- +|.++. +.++.+..-.+.|.+.
T Consensus 84 ~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~-ei~~v~~a~~~~~lKvI----iEt~~L~~~~t~eei~~a~~ia~~a 158 (231)
T 3ndo_A 84 TEAELAVAAGATEIDMVIDVGAALAGDLDAVSA-DITAVRKAVRAATLKVI----VESAALLEFSGEPLLADVCRVARDA 158 (231)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHH-HHHHHHHHTTTSEEEEE----CCHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEeehHhhhcccHHHHHH-HHHHHHHHccCCceEEE----EECcccCCCCCHHHHHHHHHHHHHH
Confidence 36678888888999976 4554 33332222 35566666653333433 333333 3445777888889999
Q ss_pred CCCEEEecCCcc-cC--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHH
Q 022982 114 GFDTIELNVGSL-EI--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRR 190 (289)
Q Consensus 114 GF~~IEISdGti-~i--~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~ 190 (289)
|-|.|--|.|+. .- +.++ .++.++.. .+.+++|-.+. ++| .++
T Consensus 159 GADfVKTSTGf~~~~gAt~ed-v~lm~~~v------~~~v~VKaaGG-----------------------Irt----~~~ 204 (231)
T 3ndo_A 159 GADFVKTSTGFHPSGGASVQA-VEIMARTV------GERLGVKASGG-----------------------IRT----AEQ 204 (231)
T ss_dssp TCSEEECCCSCCTTCSCCHHH-HHHHHHHH------TTTSEEEEESS-----------------------CCS----HHH
T ss_pred CcCEEEcCCCCCCCCCCCHHH-HHHHHHHh------CCCceEEEeCC-----------------------CCC----HHH
Confidence 999999999986 22 2222 24444443 24677775321 112 367
Q ss_pred HHHHHHccCcEEE
Q 022982 191 AERCLEAGADMIM 203 (289)
Q Consensus 191 ~~~dLeAGA~~Vi 203 (289)
+...++|||+.+=
T Consensus 205 a~~~i~aGa~RiG 217 (231)
T 3ndo_A 205 AAAMLDAGATRLG 217 (231)
T ss_dssp HHHHHHTTCSEEE
T ss_pred HHHHHHhcchhcc
Confidence 7778899999763
No 363
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=61.09 E-value=17 Score=33.37 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=83.5
Q ss_pred HHcCCCEEEecCCc----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 111 KQVGFDTIELNVGS----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 111 k~lGF~~IEISdGt----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+.||++|=+|+.+ ..++.++....++.+.+. .. +| +-+ |-.+| +
T Consensus 32 ~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~-~P-via-----------D~d~G-------y---- 86 (290)
T 2hjp_A 32 EQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIAST-VS-IP-LIA-----------DIDTG-------F---- 86 (290)
T ss_dssp HHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTT-CS-SC-EEE-----------ECTTT-------T----
T ss_pred HHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc-CC-CC-EEE-----------ECCCC-------C----
Confidence 34799999999732 357888888888888773 22 33 322 11111 1
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEeccc--------------cccC---------------CCCc----c----------
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSDD--------------VCKH---------------ADSL----R---------- 217 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEarG--------------I~d~---------------~G~~----r---------- 217 (289)
.++.+..+.+++.++|||.-|.||.-- ++.. ++.. |
T Consensus 87 -g~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 165 (290)
T 2hjp_A 87 -GNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQ 165 (290)
T ss_dssp -SSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCH
T ss_pred -CCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccH
Confidence 148889999999999999999999741 1111 1111 1
Q ss_pred HHHHHHHH--hccCCCceEEec--CCchhHHHHHHHhCCCcccccCCC--Cchhhhhhh
Q 022982 218 ADIIAKVI--GRLGLEKTMFEA--TNPRTSEWFIRRYGPKVNLFVDHS--QVMDLECLR 270 (289)
Q Consensus 218 ~d~v~~ii--~~l~~eklifEA--P~k~qQ~~~I~~fG~~VNLgI~~~--eVl~LE~LR 270 (289)
++.++... ..-|.+-|..|+ |++++-..+-+.+...|++-+.+. ..+.++.|.
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~ 224 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIA 224 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHH
Confidence 23332222 345899999999 457888899999984455432211 334555554
No 364
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=61.08 E-value=56 Score=32.08 Aligned_cols=119 Identities=9% Similarity=0.123 Sum_probs=58.4
Q ss_pred ccChhHHHHHHHHHHh---CCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCC-EEEecCCcc-------cCChhHHH
Q 022982 66 LMPKPFIEEVVKRAHQ---HDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD-TIELNVGSL-------EIPEETLL 133 (289)
Q Consensus 66 l~p~~~l~eKI~l~~~---~gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~-~IEISdGti-------~i~~~~r~ 133 (289)
+|+...+++.++.+++ ++| -+++ .++.-++.-++.+++.+.. .||+|.+.+ .+.+++..
T Consensus 2 ~M~l~~mkelL~~ak~g~~~gi~av~~---------~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~ 72 (450)
T 3txv_A 2 VMQENHLIDIARWSERPGPRGIPSICS---------AHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFT 72 (450)
T ss_dssp -------------------CCEEEECC---------CCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHH
T ss_pred CccccCHHHHHHHHHhCCCcEEEEeCc---------CCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHH
Confidence 3555668888888876 334 2333 2222344455556888876 568887644 45567777
Q ss_pred HHHHHH-HHcCCcccc-eeeeecCCCCCCCccccccccccccCCCCccccc-cHHHHHHHHHHHHHccCcEEEEecccc
Q 022982 134 RYVRLV-KSAGLKAKP-KFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVE-DVDLLIRRAERCLEAGADMIMIDSDDV 209 (289)
Q Consensus 134 ~lI~~~-~~~G~~v~~-E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~-~~~~~I~~~~~dLeAGA~~ViiEarGI 209 (289)
.+++.+ ++.++.|-| =++.-.+ .|..|.....+ .-+.-.+.++++++||=..||+.+.-.
T Consensus 73 ~~V~~~A~~~~vPv~pV~LhlDHg----------------~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~ 135 (450)
T 3txv_A 73 RFVGAIADRIEFPREKILLGGDHL----------------GPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMG 135 (450)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEEE----------------SSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBC
T ss_pred HHHHHHHHHcCcCcccEEEECCCC----------------CCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 777655 445655422 1222111 12223211110 134457889999999999999999854
No 365
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=60.97 E-value=8.1 Score=37.68 Aligned_cols=47 Identities=19% Similarity=0.164 Sum_probs=36.3
Q ss_pred HHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 106 YVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 106 yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
=|+++++|||++|.+|- |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 36 ~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 36 KLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 35688999999999872 2221 1 3678999999999999999877644
No 366
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=60.80 E-value=23 Score=32.45 Aligned_cols=18 Identities=6% Similarity=0.121 Sum_probs=15.2
Q ss_pred HHHHHHHHcCCCEEEecC
Q 022982 105 EYVEDCKQVGFDTIELNV 122 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd 122 (289)
+..+.|.+.|.|+|-+|+
T Consensus 193 ~~a~~a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGG 210 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEEcC
Confidence 456788999999999975
No 367
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=60.78 E-value=8.9 Score=37.64 Aligned_cols=47 Identities=21% Similarity=0.219 Sum_probs=36.4
Q ss_pred HHHHHHHcCCCEEEec---------CCccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 106 YVEDCKQVGFDTIELN---------VGSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 106 yl~~~k~lGF~~IEIS---------dGti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
=|+++++||+++|++| .|.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 50 ~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 50 KLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp THHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3568899999999997 23221 2 3688999999999999999877644
No 368
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=60.46 E-value=11 Score=34.71 Aligned_cols=69 Identities=19% Similarity=0.152 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhCCceec---CCcHHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc
Q 022982 71 FIEEVVKRAHQHDVYVS---TGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (289)
Q Consensus 71 ~l~eKI~l~~~~gV~v~---~GtlfE~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v 146 (289)
.+++-|++.|+.|-.+. |+..- .+ ...-++.+++.++.|++.||+..+. -+.+++.++.+.+++.||.+
T Consensus 184 ~~~eaI~~I~~aGGvaVLAHP~r~~-----~~r~~~~~~~l~~l~~~GldgIEv~~~~--~~~~~~~~~~~lA~~~gL~~ 256 (301)
T 3o0f_A 184 STHEVIAAVKGAGGVVVAAHAGDPQ-----RNRRLLSDEQLDAMIADGLDGLEVWHRG--NPPEQRERLLTIAARHDLLV 256 (301)
T ss_dssp BHHHHHHHHHHTTCEEEECSTTCTT-----TCSSCCCHHHHHHHHHHTCCEEEEESTT--SCHHHHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHCCCEEEecChhhhc-----cccccCcHHHHHHHHHCCCCEEEEeCCC--CCHHHHHHHHHHHHHcCCce
Confidence 48899999999997433 53220 01 1134567888899999999999865 47888889999999998863
No 369
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=60.43 E-value=14 Score=32.99 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCCEEEecCC---------cccCCh---hHHHHHHHHHHHcCCcccceee
Q 022982 103 FKEYVEDCKQVGFDTIELNVG---------SLEIPE---ETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdG---------ti~i~~---~~r~~lI~~~~~~G~~v~~E~g 151 (289)
.++.++.+|++||++|-|+-. .-.+++ +.-.++|+.++++|++|+-.+.
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh 103 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCH 103 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 367788888888888888621 123332 3345678888888888876654
No 370
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=60.40 E-value=30 Score=32.21 Aligned_cols=94 Identities=18% Similarity=0.221 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc--c---------cCChhHHHHHHH
Q 022982 71 FIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS--L---------EIPEETLLRYVR 137 (289)
Q Consensus 71 ~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt--i---------~i~~~~r~~lI~ 137 (289)
.+.+.|+-+|++ ++++..|+-. . .+-.+.+.+.|.|.|-||.|- + .+|.-.-+..+.
T Consensus 147 ~~~~~i~~lr~~~~~~~vi~g~v~---------t-~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~ 216 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIMAGNVV---------T-GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECA 216 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEEC---------S-HHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCC---------C-HHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHH
Confidence 355666666665 6766554310 1 123456788999999998743 2 233322222333
Q ss_pred HH-HHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 138 LV-KSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 138 ~~-~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
.+ ++.+..|+..=|+.+ -..+.+.|.+||+.|++=..
T Consensus 217 ~~~~~~~ipvIa~GGI~~---------------------------------g~di~kAlalGA~~V~vG~~ 254 (351)
T 2c6q_A 217 DAAHGLKGHIISDGGCSC---------------------------------PGDVAKAFGAGADFVMLGGM 254 (351)
T ss_dssp HHHHHTTCEEEEESCCCS---------------------------------HHHHHHHHHTTCSEEEESTT
T ss_pred HHHhhcCCcEEEeCCCCC---------------------------------HHHHHHHHHcCCCceeccHH
Confidence 33 333555555445522 24556789999999988553
No 371
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=60.38 E-value=8 Score=33.32 Aligned_cols=22 Identities=27% Similarity=0.161 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVG 123 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG 123 (289)
...++.+.+.+.|.+.|+++|-
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~ 52 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDL 52 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEH
T ss_pred CHHHHHHHHHHcCCCEEEEecc
Confidence 4666778888899999999873
No 372
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=60.11 E-value=35 Score=32.71 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+.+.++++.+.|++.|+++...- ......+.|+.+++. ++.| .+++. .
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pv----i~g~~---------------~-------- 287 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPV----VAGNV---------------A-------- 287 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCE----EEEEE---------------C--------
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceE----EeCCc---------------C--------
Confidence 456788899999999999954432 223445778888875 3332 22110 0
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEE
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
+ .+.++...++|||.|.+
T Consensus 288 ---t----~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 288 ---T----PEGTEALIKAGADAVKV 305 (494)
T ss_dssp ---S----HHHHHHHHHTTCSEEEE
T ss_pred ---C----HHHHHHHHHcCCCEEEE
Confidence 1 34557777999999999
No 373
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=60.01 E-value=30 Score=32.53 Aligned_cols=87 Identities=13% Similarity=0.108 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc--------cC----------ChhHHH----HHHHHHHHc-CCcccceeeeecCCCCC
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSL--------EI----------PEETLL----RYVRLVKSA-GLKAKPKFAVMFNKSDI 159 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti--------~i----------~~~~r~----~lI~~~~~~-G~~v~~E~g~k~~~~ev 159 (289)
+-+--+.|++.|||.|||.-+.- +. +.+.|. ++|+.+++. |- . -+++|....+.
T Consensus 169 f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~--~-~V~vrls~~~~ 245 (376)
T 1icp_A 169 FRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGS--D-RVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG--G-GEEEEECTTCC
T ss_pred HHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcC--C-ceEEEeccccc
Confidence 33334467789999999976531 11 124553 445555553 21 1 37776542211
Q ss_pred CCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 160 PSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 160 g~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
. .+- . +-.+.++.++.++..-++|+++|-+=++
T Consensus 246 ~--~g~-------~------~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 246 Y--NEA-------G------DTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp T--TTC-------C------CSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred c--CCC-------C------CCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 0 000 0 0114677788888888999999987554
No 374
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=59.98 E-value=55 Score=27.96 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=60.6
Q ss_pred HHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCC---cH-HHHHHHhCCchHHHHHHHHHHcCCCE
Q 022982 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG---DW-AEHLIRNGPSAFKEYVEDCKQVGFDT 117 (289)
Q Consensus 42 ~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G---tl-fE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (289)
..-+.+..+| +|.+=+. + .+| .+++.-++++++|+.+... ++ -+-...+.-+.+++.++.|+++|.+.
T Consensus 35 ~~l~~~~~~G--~~~vEl~-~---~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 106 (301)
T 3cny_A 35 QLLSDIVVAG--FQGTEVG-G---FFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPV 106 (301)
T ss_dssp HHHHHHHHHT--CCEECCC-T---TCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhC--CCEEEec-C---CCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCE
Confidence 3334444445 4555554 2 134 4788888999999977652 22 22211111236899999999999999
Q ss_pred EEecC------CcccC---------ChhHH-------HHHHHHHHHcCCccccee
Q 022982 118 IELNV------GSLEI---------PEETL-------LRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 118 IEISd------Gti~i---------~~~~r-------~~lI~~~~~~G~~v~~E~ 150 (289)
|=+.. |...- ..+.+ .++.+.+++.|+++.-|-
T Consensus 107 v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 107 AVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp EEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 98753 54321 23333 345566777888765554
No 375
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=59.68 E-value=5.1 Score=38.26 Aligned_cols=51 Identities=16% Similarity=0.184 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-.++-++++++|||++|++|==+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 24 i~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 24 IADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp HHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 455556788999999999972111 11 2578999999999999999877644
No 376
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=59.60 E-value=8.6 Score=36.07 Aligned_cols=114 Identities=17% Similarity=0.146 Sum_probs=65.3
Q ss_pred eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC------Cc-------------c-----cC-----ChhHHHHH
Q 022982 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV------GS-------------L-----EI-----PEETLLRY 135 (289)
Q Consensus 85 ~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd------Gt-------------i-----~i-----~~~~r~~l 135 (289)
..++++|-.+ .+=++++++|||++|+++- +. - .+ +.++..++
T Consensus 10 q~f~~~~~~i---------~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~l 80 (422)
T 1ua7_A 10 HAWNWSFNTL---------KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEM 80 (422)
T ss_dssp ECTTBCHHHH---------HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHH
T ss_pred EEecCCHHHH---------HHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHH
Confidence 3455676433 2335678999999999875 21 0 01 36889999
Q ss_pred HHHHHHcCCcccceeeeecCCCCCCC-cc----ccc-cccccccCCCCc-----------------cccccHHHHHHHHH
Q 022982 136 VRLVKSAGLKAKPKFAVMFNKSDIPS-DR----DRA-FGAYVARAPRST-----------------EYVEDVDLLIRRAE 192 (289)
Q Consensus 136 I~~~~~~G~~v~~E~g~k~~~~evg~-~~----d~~-~~~~~~~~~~~~-----------------~~~~~~~~~I~~~~ 192 (289)
|+.+.++|++|+-.+-..+-..+-.. .. .+. |...-.+..|.. +-..-.+.+++.++
T Consensus 81 v~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~ 160 (422)
T 1ua7_A 81 CAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLE 160 (422)
T ss_dssp HHHHHTTTCEEEEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEeccCcccCCccccCccccCCcccccCCCCCCCcCchhcccccccCCCCccccCCHHHHHHHHHHHH
Confidence 99999999999877654321111000 00 000 000000112221 00112467788888
Q ss_pred HHHHccCcEEEEecc
Q 022982 193 RCLEAGADMIMIDSD 207 (289)
Q Consensus 193 ~dLeAGA~~ViiEar 207 (289)
..++.|+|=.-+.+=
T Consensus 161 ~w~~~gvDGfR~D~~ 175 (422)
T 1ua7_A 161 RALNDGADGFRFDAA 175 (422)
T ss_dssp HHHHTTCCEEEETTG
T ss_pred HHHHcCCCEEEEEhh
Confidence 888999999888875
No 377
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=59.56 E-value=28 Score=29.35 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=41.1
Q ss_pred hhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (289)
...++++.+....-+|++-+--- - .+.+.+.+.++.+++.++.. +.+ . ++++++.|.+.|.|.|-
T Consensus 29 ~~~l~~~~~~~~~G~~~v~lr~~--~-~~~~~~~~~~~~l~~~~~~~--~~l---~-------v~~~~~~a~~~gad~v~ 93 (221)
T 1yad_A 29 VEELARIIITIQNEVDFIHIRER--S-KSAADILKLLDLIFEGGIDK--RKL---V-------MNGRVDIALFSTIHRVQ 93 (221)
T ss_dssp HHHHHHHHHHHGGGCSEEEECCT--T-SCHHHHHHHHHHHHHTTCCG--GGE---E-------EESCHHHHHTTTCCEEE
T ss_pred cchHHHHHHHHHCCCCEEEEccC--C-CCHHHHHHHHHHHHHhcCcC--CeE---E-------EeChHHHHHHcCCCEEE
Confidence 34566655554445777755421 1 23445677777777766531 122 1 12356889999999999
Q ss_pred ecCCc
Q 022982 120 LNVGS 124 (289)
Q Consensus 120 ISdGt 124 (289)
+....
T Consensus 94 l~~~~ 98 (221)
T 1yad_A 94 LPSGS 98 (221)
T ss_dssp ECTTS
T ss_pred eCCCc
Confidence 97543
No 378
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=59.54 E-value=7.3 Score=35.87 Aligned_cols=46 Identities=24% Similarity=0.341 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
|++++++.+.++.+|||..|=+=.|. -+....++.+...++++.+-
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd-~~G~ps~d~~~~~e~~~~IR 77 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIRE-DDGRPSQRLDRFQEAISAIR 77 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEEC-TTSCEECCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecC-CCCCcCCCHHHHHHHHHHHH
Confidence 69999999999999999999999997 44456677777777775543
No 379
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=59.48 E-value=20 Score=30.21 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCceecC-Cc---HH---HHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 022982 71 FIEEVVKRAHQHDVYVST-GD---WA---EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (289)
Q Consensus 71 ~l~eKI~l~~~~gV~v~~-Gt---lf---E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (289)
.+++.-++++++|+.+.. +. |. +....+..+.+++.++.|+++|.+.|=+.-|.
T Consensus 47 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~ 107 (278)
T 1i60_A 47 SLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLV 107 (278)
T ss_dssp CHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 455666666667765542 11 11 11111111146666666777777766664443
No 380
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=59.39 E-value=34 Score=30.74 Aligned_cols=108 Identities=8% Similarity=0.041 Sum_probs=66.6
Q ss_pred CCceeEecCCCCCCCchhHHHH---HHHhhc-ccccEEEecCccccccChhHHH-HHHHHHHhC-Ccee--cC---CcHH
Q 022982 24 FGVTEMRSPHYTLSSSHNVLED---IFESMG-QFVDGLKFSGGSHSLMPKPFIE-EVVKRAHQH-DVYV--ST---GDWA 92 (289)
Q Consensus 24 ~GlT~V~DkGl~~~~g~~~~~D---lLe~ag-~yID~lKfg~GTs~l~p~~~l~-eKI~l~~~~-gV~v--~~---Gtlf 92 (289)
+|.-+++-+|.+.. +....+ ++.+.| +.|=.+.=|+-|..=||.+.+. .-+..+++. |++| ++ +|.-
T Consensus 129 ~~kPV~lk~G~~~t--~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~ 206 (262)
T 1zco_A 129 VENPVLLKRGMGNT--IQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRR 206 (262)
T ss_dssp SSSCEEEECCTTCC--HHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSG
T ss_pred cCCcEEEecCCCCC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCcc
Confidence 57788999988422 223322 233445 4666666555454455666444 445555544 7765 33 1211
Q ss_pred HHHHHhCCchHHHHHHHHHHcCCC--EEE--------ecCCcccCChhHHHHHHHHHHH
Q 022982 93 EHLIRNGPSAFKEYVEDCKQVGFD--TIE--------LNVGSLEIPEETLLRYVRLVKS 141 (289)
Q Consensus 93 E~a~~qg~~~~~~yl~~~k~lGF~--~IE--------ISdGti~i~~~~r~~lI~~~~~ 141 (289)
+ -+..-...+..+|.+ .|| +|||..+|++++..++++.+++
T Consensus 207 ~--------~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 207 S--------LVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp G--------GHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHH
T ss_pred c--------hHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHH
Confidence 1 122223336789999 999 5599999999999999999886
No 381
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=59.31 E-value=8.3 Score=38.84 Aligned_cols=44 Identities=27% Similarity=0.188 Sum_probs=34.2
Q ss_pred HHHHHHcCCCEEEecCCcc----------------------cC-----ChhHHHHHHHHHHHcCCccccee
Q 022982 107 VEDCKQVGFDTIELNVGSL----------------------EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti----------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
|+++++|||++|.+|==+- .+ +.++..+||+.++++|++|+-.+
T Consensus 58 LdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 58 LPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5677999999999973211 11 25789999999999999987665
No 382
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=59.27 E-value=11 Score=34.32 Aligned_cols=49 Identities=10% Similarity=0.060 Sum_probs=38.6
Q ss_pred chhHHHHHHHhhcccccEEEecCccccccChh-HHHHHHHHHHhCCceec
Q 022982 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVS 87 (289)
Q Consensus 39 g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~-~l~eKI~l~~~~gV~v~ 87 (289)
......++++..++||+++|.|.--..-+..+ .+++..++++++|..|.
T Consensus 40 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~~v~~L~~l~~~~g~~If 89 (267)
T 3gdm_A 40 TTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLF 89 (267)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCSSCCTTTTHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCcCcEEEECHHHHHhcCHHHHHHHHHHHHhhcCCeEE
Confidence 56788999999999999999998777666677 77777777766665443
No 383
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=59.02 E-value=13 Score=35.23 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=35.4
Q ss_pred HHHHHHcCCCEEEecC-----------Ccc--------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNV-----------GSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISd-----------Gti--------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
++++++|||++|+++= |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 34 Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 34 IPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp HHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5667999999999962 211 13 3789999999999999999876644
No 384
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=58.72 E-value=18 Score=33.01 Aligned_cols=132 Identities=14% Similarity=0.189 Sum_probs=79.8
Q ss_pred HcCCCEEEecCCc----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 112 QVGFDTIELNVGS----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 112 ~lGF~~IEISdGt----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
+.||++|=+|+.+ ..++.++....++.+.+. .. +| +-+ |-.+| | -
T Consensus 34 ~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~-~p-via-----------D~d~G-y----------g 88 (275)
T 2ze3_A 34 AAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRA-VA-IP-VNA-----------DIEAG-Y----------G 88 (275)
T ss_dssp HHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHH-CS-SC-EEE-----------ECTTC-S----------S
T ss_pred HcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhh-cC-CC-EEe-----------ecCCC-C----------C
Confidence 4599999998532 357888888888888773 11 12 222 11111 1 0
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEecc----------------------------cc-c----cCCCCcc-----H-HHHH
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSD----------------------------DV-C----KHADSLR-----A-DIIA 222 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEar----------------------------GI-~----d~~G~~r-----~-d~v~ 222 (289)
.++++..+.+++.++|||.-|.||.- |+ | +.+..+. . +-++
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~ 168 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLA 168 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHH
Confidence 14778888899999999999999863 10 0 0011000 0 1234
Q ss_pred HHH------hccCCCceEEecCC-chhHHHHHHHhCCCcccc-cCCCCchhhhhhh
Q 022982 223 KVI------GRLGLEKTMFEATN-PRTSEWFIRRYGPKVNLF-VDHSQVMDLECLR 270 (289)
Q Consensus 223 ~ii------~~l~~eklifEAP~-k~qQ~~~I~~fG~~VNLg-I~~~eVl~LE~LR 270 (289)
+.+ ..-|.+-|..|++. .++-..+-+.+.-=+|+. .+ ..+.++.|.
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~--~~~~~~eL~ 222 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFP--GSPVPRALL 222 (275)
T ss_dssp HHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCT--TSCCHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCC--CCCCHHHHH
Confidence 444 34588889999975 577888888887557765 33 245555554
No 385
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=58.69 E-value=63 Score=29.78 Aligned_cols=32 Identities=13% Similarity=0.329 Sum_probs=17.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHH
Q 022982 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKS 141 (289)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~ 141 (289)
.+.+++.||++|+|--|. +.+.-.+.|+.+++
T Consensus 153 a~~~~~~Gf~~iKik~g~---~~~~~~e~v~avr~ 184 (379)
T 2rdx_A 153 LARHRAAGYRQFQIKVGA---DWQSDIDRIRACLP 184 (379)
T ss_dssp HHHHHHTTCCEEEEECCS---CHHHHHHHHHHHGG
T ss_pred HHHHHHcCCCEEEEeccC---CHHHHHHHHHHHHH
Confidence 344456677777776654 23333455555554
No 386
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=58.42 E-value=40 Score=32.70 Aligned_cols=157 Identities=15% Similarity=0.193 Sum_probs=99.3
Q ss_pred ChhHHHHHHHHHHhCCce---ecC----C-cH------HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc------ccC
Q 022982 68 PKPFIEEVVKRAHQHDVY---VST----G-DW------AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS------LEI 127 (289)
Q Consensus 68 p~~~l~eKI~l~~~~gV~---v~~----G-tl------fE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt------i~i 127 (289)
+.....--..++++.+|+ |.. | ++ .|-+.. +.++.+..|-+.||+.|=|.... +++
T Consensus 61 ~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~am~----~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl 136 (420)
T 2fiq_A 61 PADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDAAME----KSVELVKAYVRAGFSKIHLDASMSCAGDPIPL 136 (420)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHHHHH----HHHHHHHHHHHTTCCEEEECCCSCCBTCCSSC
T ss_pred HHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhhhhh----hHHHHHHHHHHhCCCEEEECCCCCCCCCCCCc
Confidence 455566666778888998 665 2 23 344433 35788889999999999997666 667
Q ss_pred ChhHH----HHHHHHHHHcCCc--ccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHH----HHHHc
Q 022982 128 PEETL----LRYVRLVKSAGLK--AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAE----RCLEA 197 (289)
Q Consensus 128 ~~~~r----~~lI~~~~~~G~~--v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~----~dLeA 197 (289)
++... .++++.+.+. -. +..|+|.-- ..|++..++.. .. .. ... ..||++..+.++ .+-+.
T Consensus 137 ~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vg-G~Ev~v~~~~~-~~-~~----~~~-~T~PeeA~~Fve~~~~~~~~t 207 (420)
T 2fiq_A 137 APETVAERAAVLCFAAESV-ATDCQREQLSYVI-GTEVPVPGGEA-SA-IQ----SVH-ITHVEDAANTLRTHQKAFIAR 207 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEE-ECSSCC----------------CC-CCCHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHH-cccCCcccceEEe-eeecCCCCCcc-cc-cC----CCC-CCCHHHHHHHHHHHHHHHHhh
Confidence 77763 4667777776 33 556776532 22321001100 00 00 000 126777777776 44568
Q ss_pred cCcE----EE-Ee-c----cccccCCCCccHHHHHHHHhccCCCceEEecC
Q 022982 198 GADM----IM-ID-S----DDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 238 (289)
Q Consensus 198 GA~~----Vi-iE-a----rGI~d~~G~~r~d~v~~ii~~l~~eklifEAP 238 (289)
|.|. || += + -|.| +...++.+.+.+|-+.++.-.|.+||=
T Consensus 208 Gvd~~~~~vi~LAV~iGt~HG~y-~~~~ld~e~l~~I~~~v~~P~LVle~H 257 (420)
T 2fiq_A 208 GLTEALTRVIAIVVQPGVEFDHS-NIIHYQPQEAQALAQWIENTRMVYEAH 257 (420)
T ss_dssp TCHHHHHTEEEEECCCSCEECSS-CEECCCGGGGHHHHHHHTTSSCEEEES
T ss_pred CCCcccccceEEEEeCCccCCCC-CCCCcCHHHHHHHHHhcCCCCEEEecC
Confidence 9888 44 22 1 2788 678899999999999888866999885
No 387
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=58.24 E-value=14 Score=36.68 Aligned_cols=103 Identities=20% Similarity=0.252 Sum_probs=60.2
Q ss_pred HHHHHHHHHcCCCEEEecC----------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCC-C-C
Q 022982 104 KEYVEDCKQVGFDTIELNV----------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI-P-S 161 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd----------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~ev-g-~ 161 (289)
++.+.++++|||++|+++- |.-. + +.++..++|+.+.++|++|+-.+-...-.++- + .
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~ 238 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALA 238 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSST
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCccchhh
Confidence 3445788999999999962 2211 1 25889999999999999998877543211100 0 0
Q ss_pred cccccccccc--c-----cCCCCc-----cccccHHHHHHHHHHHHHc-cCcEEEEecc
Q 022982 162 DRDRAFGAYV--A-----RAPRST-----EYVEDVDLLIRRAERCLEA-GADMIMIDSD 207 (289)
Q Consensus 162 ~~d~~~~~~~--~-----~~~~~~-----~~~~~~~~~I~~~~~dLeA-GA~~ViiEar 207 (289)
.-|.. .-+. . ...|.+ +-..-.+.+++.++..++. |+|=.-+.+=
T Consensus 239 ~~d~~-~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDGfR~D~~ 296 (617)
T 1m7x_A 239 EFDGT-NLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAV 296 (617)
T ss_dssp TGGGS-CSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCS
T ss_pred hcCCC-ccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCEEEEcch
Confidence 00100 0000 0 011221 0111246788889999986 9999999873
No 388
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=58.23 E-value=20 Score=33.93 Aligned_cols=41 Identities=15% Similarity=0.343 Sum_probs=33.3
Q ss_pred HHHHHHHHHccCcEEEEecc-----ccccCCCCccHHHHHHHHhcc
Q 022982 188 IRRAERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEar-----GI~d~~G~~r~d~v~~ii~~l 228 (289)
+..+...+.+||+-+|||.- -+.|..-.+..+.+.++++.+
T Consensus 293 ~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~i 338 (350)
T 1vr6_A 293 IPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEM 338 (350)
T ss_dssp HHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHH
Confidence 44556668899999999983 577888999999999998654
No 389
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=58.15 E-value=64 Score=30.05 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=63.4
Q ss_pred ccccEEEecCcc--ccccChhHHHHHHHHHHhCCceecC---C-cHHHHH----HHhC----------------CchHHH
Q 022982 52 QFVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNG----------------PSAFKE 105 (289)
Q Consensus 52 ~yID~lKfg~GT--s~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~a----~~qg----------------~~~~~~ 105 (289)
.-++.+|+.... ....+.+.+++.++.++++|+.+.. . .+.+.. ...| ...+.+
T Consensus 144 ~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~ 223 (461)
T 3sfw_A 144 EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGR 223 (461)
T ss_dssp SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHH
Confidence 345667765432 1356778899999999999997764 2 343321 1111 124667
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022982 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
.+..++..|... -| ..++..+-.++|+.+++.|..|..|...
T Consensus 224 ~~~la~~~g~~~-hi----~H~s~~~~l~~i~~ak~~G~~vt~e~~p 265 (461)
T 3sfw_A 224 AIALTALADAQL-YV----VHVSCADAVRRIAEAREKGWNVYGETCP 265 (461)
T ss_dssp HHHHHHHTTCEE-EE----CSCCSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred HHHHHHHhCCCE-EE----EecCcHHHHHHHHHHHhcCCcEEEeecc
Confidence 778888888764 22 2344567789999999999998777755
No 390
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=58.09 E-value=12 Score=37.09 Aligned_cols=48 Identities=13% Similarity=0.177 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCEEEecCCcc-----------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 105 EYVEDCKQVGFDTIELNVGSL-----------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-----------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+=|+++++|||++|.+|-=+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 152 ~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 152 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp HTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 346688999999999873221 11 3578999999999999999877654
No 391
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=58.05 E-value=11 Score=32.74 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHH
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKS 141 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~ 141 (289)
...++.+.+.+.|.+.|+++|-.-+ .....-.++++++++
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~ 71 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP 71 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGG
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHH
Confidence 4677888889999999999874321 111112467777766
No 392
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=57.88 E-value=19 Score=32.68 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=65.1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccc
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDR 165 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~ 165 (289)
|+.+.+..+.+++. ||.|||+-|+= .=..+.-.++|+.+++. ++ -+++|... |
T Consensus 70 ~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~----pv~vKir~---G----- 136 (318)
T 1vhn_A 70 PNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSG----KFSVKTRL---G----- 136 (318)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSS----EEEEEEES---C-----
T ss_pred HHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCC----CEEEEecC---C-----
Confidence 34677777778888 99999986532 22344455677777664 42 26666421 1
Q ss_pred ccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccc---ccc------------------CCCCc-cHHHHHH
Q 022982 166 AFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDD---VCK------------------HADSL-RADIIAK 223 (289)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarG---I~d------------------~~G~~-r~d~v~~ 223 (289)
|. .++.++.++...++|++.|+|-++. -+. .+|.+ ..+.+.+
T Consensus 137 ----------~~------~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~~ipVi~~GgI~s~~da~~ 200 (318)
T 1vhn_A 137 ----------WE------KNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEKRIPTFVSGDIFTPEDAKR 200 (318)
T ss_dssp ----------SS------SCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCCSSCEEEESSCCSHHHHHH
T ss_pred ----------CC------hHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHcCCeEEEECCcCCHHHHHH
Confidence 10 1111366777779999999998751 111 13444 3456666
Q ss_pred HHhccCCCceEEecC
Q 022982 224 VIGRLGLEKTMFEAT 238 (289)
Q Consensus 224 ii~~l~~eklifEAP 238 (289)
+++..+.+-+|+=-+
T Consensus 201 ~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 201 ALEESGCDGLLVARG 215 (318)
T ss_dssp HHHHHCCSEEEESGG
T ss_pred HHHcCCCCEEEECHH
Confidence 666556666665433
No 393
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=57.80 E-value=43 Score=30.33 Aligned_cols=19 Identities=26% Similarity=0.354 Sum_probs=15.5
Q ss_pred HHHHHHHHccCcEEEEecc
Q 022982 189 RRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEar 207 (289)
++++..+++|||-|||=+-
T Consensus 221 e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 221 AQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp HHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEECHH
Confidence 5667788999999999663
No 394
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=57.75 E-value=57 Score=30.62 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=48.9
Q ss_pred HHHHH---HHHHHcCCCEEEecCCcc--------c----------CChhHHHHH----HHHHHHc-CCcccceeeeecCC
Q 022982 103 FKEYV---EDCKQVGFDTIELNVGSL--------E----------IPEETLLRY----VRLVKSA-GLKAKPKFAVMFNK 156 (289)
Q Consensus 103 ~~~yl---~~~k~lGF~~IEISdGti--------~----------i~~~~r~~l----I~~~~~~-G~~v~~E~g~k~~~ 156 (289)
+++|. +.|++.|||.|||.-+.- + =+.+.|.|+ |+.+++. |= . -+++|...
T Consensus 152 i~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~--~-~v~vRls~ 228 (362)
T 4ab4_A 152 VEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGA--Q-RVGVHLAP 228 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG--G-GEEEEECT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCC--C-ceEEEeec
Confidence 44554 456789999999987640 1 134555554 4445442 21 1 26776543
Q ss_pred CCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 157 SDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 157 ~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
.+.- .+. .+..+.++.++.++..-++|+++|-+=++
T Consensus 229 ~~~~--~g~-------------~~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 264 (362)
T 4ab4_A 229 RADA--HDM-------------GDADRAETFTYVARELGKRGIAFICSRER 264 (362)
T ss_dssp TCCS--SSC-------------CCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cccc--ccc-------------CCCCcHHHHHHHHHHHHHhCCCEEEECCC
Confidence 2110 000 00012556778888888899999987554
No 395
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=57.74 E-value=18 Score=33.82 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=81.5
Q ss_pred HHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 111 KQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 111 k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+.||++|=+|+.++ .++.++.+..++.+.+. .+ ..=+ --|-.+| +
T Consensus 56 e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~-~~---~~Pv---------iaD~d~G-------y--- 112 (318)
T 1zlp_A 56 EKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAA-AP---NLCV---------VVDGDTG-------G--- 112 (318)
T ss_dssp HHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHH-SS---SSEE---------EEECTTC-------S---
T ss_pred HHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhh-cc---CCCE---------EEeCCCC-------C---
Confidence 456999999998432 57888888888888773 10 1111 1121111 1
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEeccc------------cccC---------------CCCc----cHHH-----HHH
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSDD------------VCKH---------------ADSL----RADI-----IAK 223 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEarG------------I~d~---------------~G~~----r~d~-----v~~ 223 (289)
.++.+..+.+++.++|||.-|.||.-- ++.. ++.. |+|. +++
T Consensus 113 --g~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ 190 (318)
T 1zlp_A 113 --GGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEE 190 (318)
T ss_dssp --SSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHH
Confidence 148889999999999999999999841 1110 0111 1211 123
Q ss_pred HH------hccCCCceEEecCC-chhHHHHHHHhCCCcccc-cC--CCCchhhhhhh
Q 022982 224 VI------GRLGLEKTMFEATN-PRTSEWFIRRYGPKVNLF-VD--HSQVMDLECLR 270 (289)
Q Consensus 224 ii------~~l~~eklifEAP~-k~qQ~~~I~~fG~~VNLg-I~--~~eVl~LE~LR 270 (289)
.+ ...|.+-|..|++. +++-..+.+.+.-=+|.. +. ....+.++.|.
T Consensus 191 ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~ 247 (318)
T 1zlp_A 191 GIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFK 247 (318)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHH
Confidence 33 44688999999975 367777888886446444 32 22445555554
No 396
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=57.74 E-value=10 Score=38.79 Aligned_cols=46 Identities=20% Similarity=0.292 Sum_probs=32.9
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---------ccCChhHHHHHHHHHHHcCCcc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS---------LEIPEETLLRYVRLVKSAGLKA 146 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---------i~i~~~~r~~lI~~~~~~G~~v 146 (289)
+..++|++.|.++||++|=|.+|= ...|..+..+|++.+++.|.++
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i 363 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGI 363 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEE
Confidence 457888888888888888887773 2234455678888888877653
No 397
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=57.70 E-value=92 Score=29.07 Aligned_cols=18 Identities=33% Similarity=0.486 Sum_probs=14.2
Q ss_pred HHHHHHHHccCcEEEEec
Q 022982 189 RRAERCLEAGADMIMIDS 206 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEa 206 (289)
+.+.+.|++||+.|++=+
T Consensus 220 ~di~kala~GAd~V~vGs 237 (361)
T 3khj_A 220 GDIGKALAVGASSVMIGS 237 (361)
T ss_dssp HHHHHHHHHTCSEEEEST
T ss_pred HHHHHHHHcCCCEEEECh
Confidence 456667899999999854
No 398
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=57.66 E-value=9.6 Score=33.83 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=38.0
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc------------c--------cCC-----hhHHHHHHHHHHHcCCcccceeee
Q 022982 101 SAFKEYVEDCKQVGFDTIELNVGS------------L--------EIP-----EETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt------------i--------~i~-----~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
..+++.++.+|++||++|-+.--. + .+. .+...++|+.++++|++|.-++..
T Consensus 36 ~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~ 112 (344)
T 1qnr_A 36 ADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 478899999999999999884110 0 111 334457999999999999988753
No 399
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=57.49 E-value=22 Score=32.63 Aligned_cols=121 Identities=14% Similarity=0.246 Sum_probs=75.1
Q ss_pred HHcCCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 111 KQVGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 111 k~lGF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+.||++|=+|+.++ .++-++....++.+.+. - -+| +-+ |-.+| +
T Consensus 36 ~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~-~-~~P-via-----------D~d~G-------y---- 90 (295)
T 1s2w_A 36 QEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDA-S-DVP-ILL-----------DADTG-------Y---- 90 (295)
T ss_dssp HHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHT-C-SSC-EEE-----------ECCSS-------C----
T ss_pred HHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc-C-CCC-EEe-----------cCCCC-------C----
Confidence 345999999996433 46777788888887763 1 133 322 11111 1
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEecc---------c-----cccC---------------CCCc----c----------
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSD---------D-----VCKH---------------ADSL----R---------- 217 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEar---------G-----I~d~---------------~G~~----r---------- 217 (289)
.++.+..+.+++.++|||.-|.||.- | ++.. .+.. |
T Consensus 91 -g~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 169 (295)
T 1s2w_A 91 -GNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGL 169 (295)
T ss_dssp -SSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCH
T ss_pred -CCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccH
Confidence 13678899999999999999999974 1 1110 0110 1
Q ss_pred HHHHHHHH--hccCCCceEEec--CCchhHHHHHHHhCCCcccc
Q 022982 218 ADIIAKVI--GRLGLEKTMFEA--TNPRTSEWFIRRYGPKVNLF 257 (289)
Q Consensus 218 ~d~v~~ii--~~l~~eklifEA--P~k~qQ~~~I~~fG~~VNLg 257 (289)
++.++... ...|.+-|..|+ |+.++-..|.+.+...+++-
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i 213 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVV 213 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEE
Confidence 33443322 456899999998 56888999999998445554
No 400
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=57.40 E-value=8.4 Score=33.00 Aligned_cols=51 Identities=8% Similarity=0.157 Sum_probs=37.7
Q ss_pred CchHHHHHHHHHHcCCCEEEec---CCc----------------------------------ccCChhHHHHHHHHHHHc
Q 022982 100 PSAFKEYVEDCKQVGFDTIELN---VGS----------------------------------LEIPEETLLRYVRLVKSA 142 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEIS---dGt----------------------------------i~i~~~~r~~lI~~~~~~ 142 (289)
+..+++.++.++++||++|-|= +|. ..++ ..-+++..++++
T Consensus 36 ~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~a~~~ 113 (387)
T 4awe_A 36 QPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVS--PFDKVVDSATKT 113 (387)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCG--GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhh--hHHHHHHHHHHc
Confidence 3478999999999999999981 110 1122 234689999999
Q ss_pred CCcccceeee
Q 022982 143 GLKAKPKFAV 152 (289)
Q Consensus 143 G~~v~~E~g~ 152 (289)
|++|..++..
T Consensus 114 gi~v~~~~~~ 123 (387)
T 4awe_A 114 GIKLIVALTN 123 (387)
T ss_dssp TCEEEEECCB
T ss_pred CCEEEEeecc
Confidence 9999988754
No 401
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=57.20 E-value=8.9 Score=34.23 Aligned_cols=67 Identities=18% Similarity=0.053 Sum_probs=43.9
Q ss_pred CchHHHHHHHHHH-c--CCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCccccccccccccC
Q 022982 100 PSAFKEYVEDCKQ-V--GFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (289)
Q Consensus 100 ~~~~~~yl~~~k~-l--GF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~ 174 (289)
|+.+..|.+.+.+ + ||=+.+. .|. +. -.++|+++++. ...+.-.+|++.
T Consensus 148 ~e~~~~~a~~g~~~l~~~~Vyl~~-~G~---~~--~~~~i~~i~~~~~~~Pv~vGgGI~s-------------------- 201 (234)
T 2f6u_A 148 KELAASYALVGEKLFNLPIIYIEY-SGT---YG--NPELVAEVKKVLDKARLFYGGGIDS-------------------- 201 (234)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEC-TTS---CC--CHHHHHHHHHHCSSSEEEEESCCCS--------------------
T ss_pred HHHHHHHHHhhhhhcCCCEEEEeC-CCC---cc--hHHHHHHHHHhCCCCCEEEEecCCC--------------------
Confidence 3458888888874 4 6666666 564 11 24677777775 345555556521
Q ss_pred CCCccccccHHHHHHHHHHHHHccCcEEEEec
Q 022982 175 PRSTEYVEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 175 ~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
.+++++.++ |||.|||=+
T Consensus 202 -------------~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 202 -------------REKAREMLR-YADTIIVGN 219 (234)
T ss_dssp -------------HHHHHHHHH-HSSEEEECH
T ss_pred -------------HHHHHHHHh-CCCEEEECh
Confidence 467777778 999999844
No 402
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=56.96 E-value=8.7 Score=36.41 Aligned_cols=73 Identities=10% Similarity=0.037 Sum_probs=53.7
Q ss_pred HHHHHhhcccccEEEecCccccccCh---hHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHH-HHcCCCEE
Q 022982 44 EDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDC-KQVGFDTI 118 (289)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs~l~p~---~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~-k~lGF~~I 118 (289)
..+++..++|++++|.|..-..-+.. +.|++-++.++++|..|..- =+..+ |+-+..|.+.+ ..+|.|+|
T Consensus 107 ~~lvd~l~~~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~g~~VflDlK~~DI-----pnTv~~ya~~~~~~lgaD~v 181 (342)
T 3n3m_A 107 FYIINETNKYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDI-----GNTVKNYRKFIFEYLKSDSC 181 (342)
T ss_dssp HHHHHHHGGGCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCC-----HHHHHHHHHHHHTTSCCSEE
T ss_pred HHHHHHhcCcCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhCCCeEEEEeecCCc-----HHHHHHHHHHHHHhcCCCEE
Confidence 37999999999999999877666664 35778888899888877653 12221 23456676665 67999999
Q ss_pred Eec
Q 022982 119 ELN 121 (289)
Q Consensus 119 EIS 121 (289)
-|+
T Consensus 182 TVh 184 (342)
T 3n3m_A 182 TVN 184 (342)
T ss_dssp EEC
T ss_pred EEc
Confidence 996
No 403
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=56.93 E-value=56 Score=28.85 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=61.4
Q ss_pred HHHHHHHhhccc-ccEEEecCc-----c-ccccCh----hHHHHHHHHHHhCCceecC-C-cH-H--------HHHHHhC
Q 022982 42 VLEDIFESMGQF-VDGLKFSGG-----S-HSLMPK----PFIEEVVKRAHQHDVYVST-G-DW-A--------EHLIRNG 99 (289)
Q Consensus 42 ~~~DlLe~ag~y-ID~lKfg~G-----T-s~l~p~----~~l~eKI~l~~~~gV~v~~-G-tl-f--------E~a~~qg 99 (289)
.+++.|+.+.+. .|.+=+... . .-..|. +.+++.-++++++|+.+.. . .+ + |.. .
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~-~-- 113 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKF-D-- 113 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHH-H--
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHH-H--
Confidence 356666655544 566666532 0 112121 2578888999999997653 2 22 1 222 1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHcCCcccce
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLKAKPK 149 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~-------~lI~~~~~~G~~v~~E 149 (289)
+.+++.++.|+++|.+.|=+....-..+.+.+. ++.+.+++.|+++.-|
T Consensus 114 -~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 169 (305)
T 3obe_A 114 -EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYH 169 (305)
T ss_dssp -HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred -HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 268999999999999999985322223444443 4455667778775544
No 404
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=56.75 E-value=6.5 Score=32.81 Aligned_cols=105 Identities=11% Similarity=0.182 Sum_probs=47.8
Q ss_pred CCCCCCchhHHHHHHHhhcccccEEEecCcccccc--ChhHHHHHHHHHHhCC-ceecC-C-c--HHHHHHHhCCchHHH
Q 022982 33 HYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQHD-VYVST-G-D--WAEHLIRNGPSAFKE 105 (289)
Q Consensus 33 Gl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~--p~~~l~eKI~l~~~~g-V~v~~-G-t--lfE~a~~qg~~~~~~ 105 (289)
|=++. -+..+.++++.+-++ .+++.+-|.... ..+.+++..+. .+ |.++. | + ..+..-..+.+++-+
T Consensus 78 GEP~l-~~~~l~~l~~~~~~~--~~~i~i~Tng~~~~~~~~~~~l~~~---~~~v~isld~~~~~~~~~~~~~~~~~~~~ 151 (245)
T 3c8f_A 78 GEAIL-QAEFVRDWFRACKKE--GIHTCLDTNGFVRRYDPVIDELLEV---TDLVMLDLKQMNDEIHQNLVGVSNHRTLE 151 (245)
T ss_dssp SCGGG-GHHHHHHHHHHHHTT--TCCEEEEECCCCCCCCHHHHHHHHT---CSEEEEECCCSSHHHHHHHHSSCSHHHHH
T ss_pred CCcCC-CHHHHHHHHHHHHHc--CCcEEEEeCCCcCcCHHHHHHHHHh---CCEEEEeCCCCCHHHhhhccCCCHHHHHH
Confidence 43333 344466777766554 235555443332 33444443332 22 34444 2 2 122211111234555
Q ss_pred HHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcCC
Q 022982 106 YVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~ 144 (289)
-++.+++.|+. +.++--.+ .-+.++..++++.+++.|.
T Consensus 152 ~i~~l~~~g~~-v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 152 FAKYLANKNVK-VWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHTCC-EEEEEEECTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCE-EEEEEeecCCCCCCHHHHHHHHHHHHhcCC
Confidence 56666677774 22321111 1123666677777777663
No 405
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=56.73 E-value=37 Score=31.86 Aligned_cols=87 Identities=10% Similarity=0.086 Sum_probs=48.8
Q ss_pred HHHHH---HHHHHcCCCEEEecCCcc--------c----------CChhHHH----HHHHHHHHc-CCcccceeeeecCC
Q 022982 103 FKEYV---EDCKQVGFDTIELNVGSL--------E----------IPEETLL----RYVRLVKSA-GLKAKPKFAVMFNK 156 (289)
Q Consensus 103 ~~~yl---~~~k~lGF~~IEISdGti--------~----------i~~~~r~----~lI~~~~~~-G~~v~~E~g~k~~~ 156 (289)
+++|. +.|++.|||.|||.-+.- + =+.+.|. ++|+.+++. |= . -+++|...
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~--~-~v~vRls~ 236 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSA--A-RVGVHLAP 236 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCG--G-GEEEEECT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCC--C-eEEEeccc
Confidence 44554 456789999999987640 1 1234444 455555553 21 1 26776543
Q ss_pred CCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEecc
Q 022982 157 SDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 157 ~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEar 207 (289)
.+.- .+ + .+..+.++.++.++..-++|+++|-+=++
T Consensus 237 ~~~~--~g-----------~--~~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 272 (361)
T 3gka_A 237 RGDA--HT-----------M--GDSDPAATFGHVARELGRRRIAFLFARES 272 (361)
T ss_dssp TCCS--SS-----------C--CCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cccc--CC-----------C--CCCCcHHHHHHHHHHHHHcCCCEEEECCC
Confidence 2110 00 0 00012566788888888899999987554
No 406
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=56.67 E-value=39 Score=32.06 Aligned_cols=120 Identities=15% Similarity=0.128 Sum_probs=70.2
Q ss_pred HHHHHHHHHHh------CCceecCCcHHHHHHHhCCch---HHHHHHHHHHcC------CCEEEecCCcccC----C---
Q 022982 71 FIEEVVKRAHQ------HDVYVSTGDWAEHLIRNGPSA---FKEYVEDCKQVG------FDTIELNVGSLEI----P--- 128 (289)
Q Consensus 71 ~l~eKI~l~~~------~gV~v~~GtlfE~a~~qg~~~---~~~yl~~~k~lG------F~~IEISdGti~i----~--- 128 (289)
.+.|.|+-.++ -+|+++++.|++-+ .+... ..++.+.+.+.| .++|+||.|+..- |
T Consensus 223 f~~Eiv~aVr~avg~~~V~vRls~~~~~~g~--~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~ 300 (402)
T 2hsa_B 223 FITQVVQAVVSAIGADRVGVRVSPAIDHLDA--MDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGR 300 (402)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECSSCCSTTC--CCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTT
T ss_pred HHHHHHHHHHHHhCCCcEEEEeccccccCCC--CCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCcccc
Confidence 35555555543 34577776553211 11112 445566777889 9999999997542 2
Q ss_pred --hh-HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEE
Q 022982 129 --EE-TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMI 204 (289)
Q Consensus 129 --~~-~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~Vii 204 (289)
.. ...++++.+++. +. .|=++. | . . + .+.+++.|++| ||.|++
T Consensus 301 ~~~~~~~~~~~~~vk~~-~~-iPvi~~-------G--------~-----------i-~----~~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 301 LGSEEEEARLMRTLRNA-YQ-GTFICS-------G--------G-----------Y-T----RELGIEAVAQGDADLVSY 347 (402)
T ss_dssp TTHHHHHHHHHHHHHHH-CS-SCEEEE-------S--------S-----------C-C----HHHHHHHHHTTSCSEEEE
T ss_pred ccCCcchHHHHHHHHHH-CC-CCEEEe-------C--------C-----------C-C----HHHHHHHHHCCCCceeee
Confidence 12 235677777773 11 121121 1 1 1 1 36778888998 999988
Q ss_pred eccccccCCCCccHHHHHHHHhccCCC
Q 022982 205 DSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 205 EarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
+|+++.+ .+++.++.+..++.
T Consensus 348 -gR~~l~d-----P~l~~k~~~g~~l~ 368 (402)
T 2hsa_B 348 -GRLFISN-----PDLVMRIKLNAPLN 368 (402)
T ss_dssp -SHHHHHC-----TTHHHHHHHTCCCC
T ss_pred -cHHHHhC-----chHHHHHHhCCCCC
Confidence 6765432 57788888765544
No 407
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=56.63 E-value=58 Score=28.56 Aligned_cols=107 Identities=11% Similarity=0.155 Sum_probs=64.5
Q ss_pred ChhHHHHHHHHHHhC--Ccee-c-----C-CcHHHHHHHhCCchHHHHHHHHHHc-CCCEEEecCCcccCChhHHHHHHH
Q 022982 68 PKPFIEEVVKRAHQH--DVYV-S-----T-GDWAEHLIRNGPSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETLLRYVR 137 (289)
Q Consensus 68 p~~~l~eKI~l~~~~--gV~v-~-----~-GtlfE~a~~qg~~~~~~yl~~~k~l-GF~~IEISdGti~i~~~~r~~lI~ 137 (289)
+.+.+.+.+..++++ ++++ + . ||-++.- .+..-++++.+-++ ++++|.|---+. .+.+...++++
T Consensus 45 ~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~----~~~~~~ll~~~~~~~~~d~iDvEl~~~-~~~~~~~~l~~ 119 (238)
T 1sfl_A 45 TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFT----NDSYLNLISDLANINGIDMIDIEWQAD-IDIEKHQRIIT 119 (238)
T ss_dssp CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCC----HHHHHHHHHHGGGCTTCCEEEEECCTT-SCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCC----HHHHHHHHHHHHHhCCCCEEEEEccCC-CChHHHHHHHH
Confidence 456688888888876 4433 1 1 5533211 01233344555555 699998854321 27777889999
Q ss_pred HHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 138 LVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 138 ~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
.+++.|-+++--++- ...++ +.+++++..++..+.|||.|=|
T Consensus 120 ~~~~~~~kvI~S~Hd---f~~tp----------------------~~~el~~~~~~~~~~gaDivKi 161 (238)
T 1sfl_A 120 HLQQYNKEVIISHHN---FESTP----------------------PLDELQFIFFKMQKFNPEYVKL 161 (238)
T ss_dssp HHHHTTCEEEEEEEE---SSCCC----------------------CHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHhcCCEEEEEecC---CCCCc----------------------CHHHHHHHHHHHHHcCCCEEEE
Confidence 999987776554443 11111 2577888899999999996544
No 408
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=56.63 E-value=11 Score=36.82 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=35.7
Q ss_pred HHHHHHcCCCEEEec---------CCccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELN---------VGSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEIS---------dGti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+++++|||++|.+| .|.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 37 ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 37 LDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp HHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 567799999999996 23221 2 3578999999999999999877644
No 409
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=56.55 E-value=21 Score=32.82 Aligned_cols=118 Identities=13% Similarity=0.133 Sum_probs=74.6
Q ss_pred HHcCCCEEEecCCc-----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 111 KQVGFDTIELNVGS-----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 111 k~lGF~~IEISdGt-----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+.||++|=+|+.. ..++.++.+..++.+.+. -. +| +-+ |-.+| +
T Consensus 38 e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~-~~-~P-via-----------D~d~G-------y--- 93 (287)
T 3b8i_A 38 ADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRV-AR-LP-VIA-----------DADHG-------Y--- 93 (287)
T ss_dssp HHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTT-CS-SC-EEE-----------ECTTC-------S---
T ss_pred HHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhc-CC-CC-EEE-----------ECCCC-------C---
Confidence 34699999998762 257888988888888773 11 23 222 11111 1
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEeccc-----------------------------c---------ccCCCCc-cHHH
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSDD-----------------------------V---------CKHADSL-RADI 220 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEarG-----------------------------I---------~d~~G~~-r~d~ 220 (289)
.++++..+.+++.++|||.-|.||.-- + +|. ... -++.
T Consensus 94 --g~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~a 170 (287)
T 3b8i_A 94 --GNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAV 170 (287)
T ss_dssp --SSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHH
T ss_pred --CCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHH
Confidence 148889999999999999999999741 0 111 000 0233
Q ss_pred HHHHH--hccCCCceEEecCC-chhHHHHHHHhCCCcc
Q 022982 221 IAKVI--GRLGLEKTMFEATN-PRTSEWFIRRYGPKVN 255 (289)
Q Consensus 221 v~~ii--~~l~~eklifEAP~-k~qQ~~~I~~fG~~VN 255 (289)
++... ..-|.+-|..|++. .++-..+-+.+.-=+|
T Consensus 171 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~i 208 (287)
T 3b8i_A 171 IQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLM 208 (287)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCCCCEE
Confidence 33322 44688899999975 4666667676654555
No 410
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=56.37 E-value=23 Score=30.59 Aligned_cols=120 Identities=24% Similarity=0.237 Sum_probs=70.5
Q ss_pred HHHHHHHhhcc-----cccEEEecCccccccChhHHHHHHHHHHhC-----CceecC-C-cHHHHHHHhCCc--------
Q 022982 42 VLEDIFESMGQ-----FVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-----DVYVST-G-DWAEHLIRNGPS-------- 101 (289)
Q Consensus 42 ~~~DlLe~ag~-----yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-----gV~v~~-G-tlfE~a~~qg~~-------- 101 (289)
.|+++|+.+.+ +|| +|-... .+....+..+++.+++ .|.++. - ..+..+-...|+
T Consensus 96 tL~evl~~~~~~~~~l~iE-iK~~~~----~~~~~~~~v~~~l~~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~ 170 (247)
T 2otd_A 96 LLSQVAERCREHGMMANIE-IKPTTG----TGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQQAAPELPRGLLLD 170 (247)
T ss_dssp BHHHHHHHHHHTTCEEEEE-ECCCTT----CHHHHHHHHHHHHHHHTTTSCCCEEEESCHHHHHHHHHHCTTSCEEEEES
T ss_pred CHHHHHHHHHhcCCEEEEE-ECCCCC----cchHHHHHHHHHHHHHhcCcCCEEEEcCCHHHHHHHHHHCCCCCEEEEec
Confidence 78888887642 344 353321 1122334455555543 243433 2 234444444332
Q ss_pred -hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 102 -AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 102 -~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
...++.+.++.+|++.|-++-..++ .++|+.++++|++|.+ .++.
T Consensus 171 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~-wTvn--------------------------- 216 (247)
T 2otd_A 171 EWRDDWRELTARLGCVSIHLNHKLLD------KARVMQLKDAGLRILV-YTVN--------------------------- 216 (247)
T ss_dssp SCCTTHHHHHHHHTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE-ECCC---------------------------
T ss_pred CCcccHHHHHHHcCCeEEecChHhCC------HHHHHHHHHCCCEEEE-EccC---------------------------
Confidence 1134567789999999888765442 4689999999988655 2221
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEec
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDS 206 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEa 206 (289)
+ .+.+++.++.|++-||.+-
T Consensus 217 --~----~~~~~~l~~~GvdgI~TD~ 236 (247)
T 2otd_A 217 --K----PQHAAELLRWGVDCICTDA 236 (247)
T ss_dssp --C----HHHHHHHHHHTCSEEEESC
T ss_pred --C----HHHHHHHHHcCCCEEEeCC
Confidence 1 2456778899999999864
No 411
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=56.36 E-value=17 Score=32.01 Aligned_cols=41 Identities=17% Similarity=0.319 Sum_probs=33.5
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceE
Q 022982 188 IRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 234 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~ekli 234 (289)
++.+++.|++||++|++-+.-+ -+++++.++++.+|.++++
T Consensus 87 ~e~~~~~l~~GadkVii~t~a~------~~p~li~e~~~~~g~q~iv 127 (243)
T 4gj1_A 87 KEEVKALLDCGVKRVVIGSMAI------KDATLCLEILKEFGSEAIV 127 (243)
T ss_dssp HHHHHHHHHTTCSEEEECTTTT------TCHHHHHHHHHHHCTTTEE
T ss_pred HHHHHHHHHcCCCEEEEccccc------cCCchHHHHHhcccCceEE
Confidence 6889999999999999977522 2578888898888877766
No 412
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.30 E-value=52 Score=28.01 Aligned_cols=139 Identities=12% Similarity=0.130 Sum_probs=73.7
Q ss_pred CceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHh----CCceec--CC-------cH
Q 022982 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVS--TG-------DW 91 (289)
Q Consensus 25 GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~----~gV~v~--~G-------tl 91 (289)
++..+..=|+ . .+...+.+++. | .|.+ ..|+.++.+++.+++.++.+.. .++.+. .| +|
T Consensus 74 ~ipvi~~ggI--~-~~~~~~~~~~~-G--ad~V--~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~ 145 (253)
T 1thf_D 74 DIPFTVGGGI--H-DFETASELILR-G--ADKV--SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSG 145 (253)
T ss_dssp CSCEEEESSC--C-SHHHHHHHHHT-T--CSEE--EESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTT
T ss_pred CCCEEEeCCC--C-CHHHHHHHHHc-C--CCEE--EEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCC
Confidence 5555555444 2 45566666653 3 5554 5567777766667777666532 122222 12 22
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecC----CcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccc
Q 022982 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNV----GSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRA 166 (289)
Q Consensus 92 fE~a~~qg~~~~~~yl~~~k~lGF~~IEISd----Gti~i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~ 166 (289)
.|. ......+..+.+.++|++.|=+++ |+..=+ + .++++++++. ...+..+-|+.
T Consensus 146 ~~~----~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~--~-~~~~~~l~~~~~ipvia~GGI~------------- 205 (253)
T 1thf_D 146 KKN----TGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY--D-TEMIRFVRPLTTLPIIASGGAG------------- 205 (253)
T ss_dssp TEE----EEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCC--C-HHHHHHHGGGCCSCEEEESCCC-------------
T ss_pred ccc----cCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCC--C-HHHHHHHHHhcCCCEEEECCCC-------------
Confidence 220 001356777778888999887753 222111 1 3456665542 33333333331
Q ss_pred cccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccC
Q 022982 167 FGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH 212 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~ 212 (289)
++ +.+++.+++||+-|++ ++.++.+
T Consensus 206 ----------------~~----~d~~~~~~~Gadgv~v-Gsal~~~ 230 (253)
T 1thf_D 206 ----------------KM----EHFLEAFLAGADAALA-ASVFHFR 230 (253)
T ss_dssp ----------------SH----HHHHHHHHTTCSEEEE-SHHHHTT
T ss_pred ----------------CH----HHHHHHHHcCChHHHH-HHHHHcC
Confidence 12 4445556799999987 4567654
No 413
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=56.01 E-value=92 Score=26.28 Aligned_cols=59 Identities=15% Similarity=0.291 Sum_probs=40.2
Q ss_pred ChhHHHHHHHHHHhCCcee---cC-CcHH-------HHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc
Q 022982 68 PKPFIEEVVKRAHQHDVYV---ST-GDWA-------EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (289)
Q Consensus 68 p~~~l~eKI~l~~~~gV~v---~~-Gtlf-------E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (289)
+++.+++.-++++++|+.+ +. +.+. +....+.-+.+++.++.|+++|.+.|=+.-|...
T Consensus 45 ~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~ 114 (285)
T 1qtw_A 45 TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 (285)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCT
T ss_pred CHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCC
Confidence 3466888899999999983 32 2221 1111111126888999999999999988777653
No 414
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=55.99 E-value=31 Score=32.03 Aligned_cols=148 Identities=12% Similarity=0.155 Sum_probs=80.6
Q ss_pred hhcccccEEEecCccccccChhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe-cCCcc
Q 022982 49 SMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL-NVGSL 125 (289)
Q Consensus 49 ~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v--~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI-SdGti 125 (289)
-..+|+|++|+|-+.. .+.+.|++ +. +.|.+| ..|.. -.++.+..-++++++-|-+-|=+ --|+
T Consensus 127 ~l~~~vd~lkIgA~~~--~n~~LLr~-va---~~gkPVilK~Gms------~t~~ei~~ave~i~~~Gn~~iiL~erg~- 193 (298)
T 3fs2_A 127 AVAPVVDVLQIPAFLC--RQTDLLIA-AA---RTGRVVNVKKGQF------LAPWDMKNVLAKITESGNPNVLATERGV- 193 (298)
T ss_dssp HHTTTCSEEEECGGGT--TCHHHHHH-HH---HTTSEEEEECCTT------CCGGGHHHHHHHHHTTTCCCEEEEECCE-
T ss_pred HHHhhCCEEEECcccc--CCHHHHHH-HH---ccCCcEEEeCCCC------CCHHHHHHHHHHHHHcCCCeEEEEECCC-
Confidence 4467899999986544 34345554 32 456654 45742 01113344455566667653333 2232
Q ss_pred cCChhH---HHHHHHHHHHcCCcccc--eeeeecCCCCCC-CccccccccccccCCCCccccccHHHHHHHHHHHHHccC
Q 022982 126 EIPEET---LLRYVRLVKSAGLKAKP--KFAVMFNKSDIP-SDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA 199 (289)
Q Consensus 126 ~i~~~~---r~~lI~~~~~~G~~v~~--E~g~k~~~~evg-~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA 199 (289)
+-+.++ -++.|..+++.|+.|.- -=.++.+...-+ +.++ .+.++..+...+.+||
T Consensus 194 ~y~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~~~~~s~G~-------------------r~~v~~~a~AAvAlGA 254 (298)
T 3fs2_A 194 SFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGGQGGSTGGQ-------------------REFVETLARAAVAVGV 254 (298)
T ss_dssp ECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------C-------------------GGGHHHHHHHHHHHCC
T ss_pred CCCCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCcccCCCCCc-------------------hhhHHHHHHHHHHcCC
Confidence 222222 14556667764443211 001111110000 0111 3345778889999999
Q ss_pred cEEEEec-----cccccCCCCccHHHHHHHHhcc
Q 022982 200 DMIMIDS-----DDVCKHADSLRADIIAKVIGRL 228 (289)
Q Consensus 200 ~~ViiEa-----rGI~d~~G~~r~d~v~~ii~~l 228 (289)
+-+|||- +-+.|..-.+..+.++++++++
T Consensus 255 dGl~IE~H~tpd~al~D~~~sl~p~el~~lv~~i 288 (298)
T 3fs2_A 255 AGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKL 288 (298)
T ss_dssp SEEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHH
T ss_pred CEEEEEecCChhccCCchhhcCCHHHHHHHHHHH
Confidence 9999998 3677888888988888888654
No 415
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=55.97 E-value=13 Score=32.86 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceee
Q 022982 105 EYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
+.++.+|++||++|-|.-+ -...+.+...++|+.+.++|++|+-+++
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4455566677777666432 1122344555667777777777766654
No 416
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=55.93 E-value=1e+02 Score=28.90 Aligned_cols=19 Identities=26% Similarity=0.438 Sum_probs=15.2
Q ss_pred HHHHHHHHccCcEEEEecc
Q 022982 189 RRAERCLEAGADMIMIDSD 207 (289)
Q Consensus 189 ~~~~~dLeAGA~~ViiEar 207 (289)
+.+.+.|++||+.|++=+.
T Consensus 224 ~di~kala~GAd~V~vGs~ 242 (366)
T 4fo4_A 224 GDISKAIAAGASCVMVGSM 242 (366)
T ss_dssp HHHHHHHHTTCSEEEESTT
T ss_pred HHHHHHHHcCCCEEEEChH
Confidence 4566789999999999653
No 417
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=55.85 E-value=10 Score=36.15 Aligned_cols=56 Identities=14% Similarity=0.019 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHccCcEEEEeccc-cccC-CCCccHHHHHHHHhcc---CCCceEEecCC
Q 022982 184 VDLLIRRAERCLEAGADMIMIDSDD-VCKH-ADSLRADIIAKVIGRL---GLEKTMFEATN 239 (289)
Q Consensus 184 ~~~~I~~~~~dLeAGA~~ViiEarG-I~d~-~G~~r~d~v~~ii~~l---~~eklifEAP~ 239 (289)
.+.+++.++..++.|+|=.-+.+=. |... +.....+.+.++.+.+ .+--++=|+..
T Consensus 176 r~~i~~~~~~Wl~~gvDGfR~Da~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~vgE~~~ 236 (488)
T 1wza_A 176 QEKVIGIAKYWLKQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWD 236 (488)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCChhHhhHhhhccccCcchHHHHHHHHHHHHhhcCCCEEEEEeCC
Confidence 4678888999999999999998864 4432 1222245666665443 23345557765
No 418
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=55.81 E-value=96 Score=28.45 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=77.0
Q ss_pred HHhhcc-cccEEEecCccccccChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 022982 47 FESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (289)
Q Consensus 47 Le~ag~-yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt 124 (289)
++...+ -.||+=+-||.-.......+.---.+.+++|+.+.+= |- .-++...+++.+..++++|++.|=+=.|-
T Consensus 45 ~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc----~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 45 IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTC----IDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEES----TTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeec----CCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 444433 3677777676665554444442223445689977662 32 12344478889999999999988754443
Q ss_pred ccC----ChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccC
Q 022982 125 LEI----PEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGA 199 (289)
Q Consensus 125 i~i----~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA 199 (289)
..- +...=.+||+.+++. +| .+|+-.- +.+.+ + ..+.+.-++..++-++|||
T Consensus 121 pp~~~~~~~~~A~dLv~~ir~~~~f----~IgvA~y-----PE~Hp--------~------a~~~~~d~~~Lk~KvdAGA 177 (304)
T 3fst_A 121 LPPGSGKPEMYASDLVTLLKEVADF----DISVAAY-----PEVHP--------E------AKSAQADLLNLKRKVDAGA 177 (304)
T ss_dssp CC------CCCHHHHHHHHHHHCCC----EEEEEEC-----TTCCT--------T------CSCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCC----eEEEEeC-----CCcCC--------C------CCCHHHHHHHHHHHHHcCC
Confidence 211 112223566666553 23 3455210 11221 1 1246777999999999999
Q ss_pred cEEEEec
Q 022982 200 DMIMIDS 206 (289)
Q Consensus 200 ~~ViiEa 206 (289)
+++|.--
T Consensus 178 df~iTQ~ 184 (304)
T 3fst_A 178 NRAITQF 184 (304)
T ss_dssp CEEEECC
T ss_pred CEEEeCc
Confidence 9999754
No 419
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=55.72 E-value=58 Score=31.14 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=59.0
Q ss_pred ccEEEe--cCccccccChhHHHHHHHHHHhCCceecC---C-cHHHH----HHHhCC----------------chHHHHH
Q 022982 54 VDGLKF--SGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEH----LIRNGP----------------SAFKEYV 107 (289)
Q Consensus 54 ID~lKf--g~GTs~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~----a~~qg~----------------~~~~~yl 107 (289)
+..+|+ ++......+.+.+++.++.++++|+.+.. . .+.+. +...|. ..+..-+
T Consensus 143 ~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i 222 (490)
T 3dc8_A 143 INTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAI 222 (490)
T ss_dssp CCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHH
Confidence 344554 23333444677788888888888876653 2 23221 111111 1355667
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeee
Q 022982 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVM 153 (289)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k 153 (289)
..++..|... -| .-++..+-.++|+.+++.|+.|..|+...
T Consensus 223 ~la~~~g~~l-hi----~HvSt~~~~~li~~ak~~G~~Vt~e~~ph 263 (490)
T 3dc8_A 223 MIADMAGCPV-YI----VHTSCEQAHEAIRRARAKGMRVFGEPLIQ 263 (490)
T ss_dssp HHHHHHTCCE-EE----SSCCSHHHHHHHHHHHHTTCCEEECCBHH
T ss_pred HHHHHhCCcE-EE----EeCCCHHHHHHHHHHHHCCCeEEEEEchH
Confidence 7778888653 22 33556788899999999999999888653
No 420
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=55.72 E-value=1.2e+02 Score=27.46 Aligned_cols=92 Identities=11% Similarity=0.071 Sum_probs=54.7
Q ss_pred ccEEEecCccc-----cccChhHHHHHHHHHHhCCceecC---C-cHHHHH----HHhCC----------------chHH
Q 022982 54 VDGLKFSGGSH-----SLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNGP----------------SAFK 104 (289)
Q Consensus 54 ID~lKfg~GTs-----~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~a----~~qg~----------------~~~~ 104 (289)
++.+|++.+.+ ...+.+.+++-++.++++|.++.. . ...+.+ ...|. ..++
T Consensus 143 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~ 222 (458)
T 1gkr_A 143 AVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQ 222 (458)
T ss_dssp CCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHH
T ss_pred CcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHH
Confidence 56788765433 245678899999999999987653 2 233322 23331 1234
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 022982 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+.++.+++.|... -+. .++...=.++|+.+++.|+.+..|+
T Consensus 223 ~~~~la~~~g~~~-h~~----H~~~~~~~~~i~~~~~~G~~v~~~~ 263 (458)
T 1gkr_A 223 RALLLQKEAGCRL-IVL----HVSNPDGVELIHQAQSEGQDVHCES 263 (458)
T ss_dssp HHHHHHHHHCCEE-EEC----CCCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhCCCE-EEE----eCCCHHHHHHHHHHHHCCCcEEEEE
Confidence 5666778888752 121 1222233467777888887665554
No 421
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=55.67 E-value=27 Score=32.38 Aligned_cols=134 Identities=19% Similarity=0.188 Sum_probs=79.8
Q ss_pred HHcCCCEEEecC-------C---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccc
Q 022982 111 KQVGFDTIELNV-------G---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEY 180 (289)
Q Consensus 111 k~lGF~~IEISd-------G---ti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~ 180 (289)
.+.||++|=+|+ | +..++.++.+..++.+.+. -. +| +-+ |-.+| +
T Consensus 46 e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~-~~-~p-via-----------D~d~G-------y---- 100 (305)
T 3ih1_A 46 RNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRA-TD-LP-VLV-----------DIDTG-------F---- 100 (305)
T ss_dssp HHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHH-HC-CC-EEE-----------ECTTC-------S----
T ss_pred HHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHh-cC-CC-EEE-----------ECCCC-------C----
Confidence 456999999998 3 3457888888888877663 11 12 222 11111 1
Q ss_pred cccHHHHHHHHHHHHHccCcEEEEecc------c------ccc-------------CCCCc----cH---------HHHH
Q 022982 181 VEDVDLLIRRAERCLEAGADMIMIDSD------D------VCK-------------HADSL----RA---------DIIA 222 (289)
Q Consensus 181 ~~~~~~~I~~~~~dLeAGA~~ViiEar------G------I~d-------------~~G~~----r~---------d~v~ 222 (289)
-++....+.+++..++||.-|-||.- | +++ ....+ |+ +.|+
T Consensus 101 -g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~ 179 (305)
T 3ih1_A 101 -GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIE 179 (305)
T ss_dssp -SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHH
Confidence 13677888899999999999999984 1 000 00000 12 2333
Q ss_pred HHH--hccCCCceEEecCCc-hhHHHHHHHhCCCcccc-cCC--CCchhhhhhh
Q 022982 223 KVI--GRLGLEKTMFEATNP-RTSEWFIRRYGPKVNLF-VDH--SQVMDLECLR 270 (289)
Q Consensus 223 ~ii--~~l~~eklifEAP~k-~qQ~~~I~~fG~~VNLg-I~~--~eVl~LE~LR 270 (289)
... ...|.+-|..|++.. ++-..+.+.+..-|+.. +.. +..+..+.|+
T Consensus 180 Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~ 233 (305)
T 3ih1_A 180 RANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFA 233 (305)
T ss_dssp HHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHH
Confidence 222 446799999999754 77778888887666543 322 2345555554
No 422
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=55.59 E-value=44 Score=31.75 Aligned_cols=88 Identities=17% Similarity=0.133 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--------c----------CChhHHH----HHHHHHHHc-CCcccceeeeecCCCC
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL--------E----------IPEETLL----RYVRLVKSA-GLKAKPKFAVMFNKSD 158 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--------~----------i~~~~r~----~lI~~~~~~-G~~v~~E~g~k~~~~e 158 (289)
.|-+--+.|++.|||.|||.-+.- + =+.+.|. ++|+.+++. |= .| +++|....+
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~--~~-V~vRls~~~ 248 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGA--DR-VGVRVSPAI 248 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG--GG-EEEEECSSC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCC--Cc-EEEEecccc
Confidence 334444566788999999987520 1 1234554 445555553 21 12 677753221
Q ss_pred CCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc------CcEEEEecc
Q 022982 159 IPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG------ADMIMIDSD 207 (289)
Q Consensus 159 vg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG------A~~ViiEar 207 (289)
.. .+. + +-.+.++.++.++..-++| +++|-+=++
T Consensus 249 ~~--~g~-------~------~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 249 DH--LDA-------M------DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp CS--TTC-------C------CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred cc--CCC-------C------CCCCHHHHHHHHHHHHhcCCccCCceEEEEEecC
Confidence 00 000 0 0114677788888888999 999988554
No 423
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=55.56 E-value=6.2 Score=34.21 Aligned_cols=64 Identities=16% Similarity=0.182 Sum_probs=51.5
Q ss_pred HHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccc
Q 022982 78 RAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 78 l~~~~gV-~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~ 148 (289)
+++++|| .+.- |--.++|+.+- .. .+.++||+.+=++|.+-+.+.+ .....++++++.|-.+.+
T Consensus 148 ~L~~~gi~~l~i~G~~t~~CV~~T--a~-----~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 148 YLEKHHTDEVYIVGVALEYXVKAT--AI-----SAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVD 215 (216)
T ss_dssp HHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHhCCCCEEEEEEeccccHHHHH--HH-----HHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEeC
Confidence 4567898 4444 76788888885 33 3567999999999999999999 999999999999877643
No 424
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=55.51 E-value=8.4 Score=31.92 Aligned_cols=65 Identities=28% Similarity=0.243 Sum_probs=52.1
Q ss_pred HHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 77 KRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 77 ~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
+.++++|| .+. .|-..++|+.+- .. .+.++||+.+=++|.+-+.+++.....++.++..|-.+.+
T Consensus 113 ~~L~~~gi~~lvi~G~~t~~CV~~T--a~-----da~~~Gy~v~vv~Da~~~~~~~~h~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 113 KILRGNGVKRVYICGVATEYCVRAT--AL-----DALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIVQ 179 (180)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHhCCCCEEEEEEeecCHHHHHH--HH-----HHHHCCCEEEEehhhccCCCHHHHHHHHHHHHHcCCEEEe
Confidence 45577899 455 477889998885 33 3557899999999999999999999999999998766543
No 425
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=55.35 E-value=35 Score=29.91 Aligned_cols=17 Identities=12% Similarity=0.239 Sum_probs=8.5
Q ss_pred HHHHHHccCcEEEEecc
Q 022982 191 AERCLEAGADMIMIDSD 207 (289)
Q Consensus 191 ~~~dLeAGA~~ViiEar 207 (289)
++...++|||+|.+=+.
T Consensus 85 i~~~~~~Gad~vTvH~~ 101 (245)
T 1eix_A 85 VAAAADLGVWMVNVHAS 101 (245)
T ss_dssp HHHHHHHTCSEEEEBGG
T ss_pred HHHHHhCCCCEEEEecc
Confidence 44444555555555443
No 426
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=55.26 E-value=15 Score=37.32 Aligned_cols=53 Identities=21% Similarity=0.397 Sum_probs=42.6
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHcCCcccceeee
Q 022982 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEI---------SdGti~i~-~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++|+.|+-..|-
T Consensus 31 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGP 93 (595)
T 4e8d_A 31 PEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSP 93 (595)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecCC
Confidence 557888999999999999988 56666665 245778999999999999876443
No 427
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=55.18 E-value=15 Score=36.78 Aligned_cols=50 Identities=18% Similarity=0.325 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+.+-++++++|||++|+++- |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 108 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 108 VAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp HHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 44556888999999999962 221 12 2578999999999999999866643
No 428
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=54.97 E-value=24 Score=37.25 Aligned_cols=73 Identities=25% Similarity=0.332 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc------------CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLE------------IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFG 168 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~------------i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~ 168 (289)
.+.+..+.+.+.|+|+|||+-++=. -..+...++|+.+++. + +| +.+|...
T Consensus 649 ~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~---~P-v~vK~~~------------ 712 (1025)
T 1gte_A 649 DWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ---IP-FFAKLTP------------ 712 (1025)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS---SC-EEEEECS------------
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC---Cc-eEEEeCC------------
Confidence 4556666777789999999866422 2344556788888774 2 22 4555321
Q ss_pred cccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 169 AYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
+..++.+.++...++||+.|++
T Consensus 713 --------------~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 713 --------------NVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp --------------CSSCHHHHHHHHHHHTCSEEEE
T ss_pred --------------ChHHHHHHHHHHHHcCCCEEEE
Confidence 1123466677778999999999
No 429
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=54.94 E-value=17 Score=32.72 Aligned_cols=104 Identities=16% Similarity=0.271 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
.+++++++++++||.+|=|+-+.+..-. +.++..+.++-+=+| ||.+.
T Consensus 44 ~i~~lc~eA~~~~~~aVcV~p~~v~~a~-------~~L~~s~v~v~tVig--FP~G~----------------------- 91 (239)
T 3ngj_A 44 QIRKLCSEAAEYKFASVCVNPTWVPLCA-------ELLKGTGVKVCTVIG--FPLGA----------------------- 91 (239)
T ss_dssp HHHHHHHHHHHHTCSEEEECGGGHHHHH-------HHHTTSSCEEEEEES--TTTCC-----------------------
T ss_pred HHHHHHHHHHhcCCcEEEECHHHHHHHH-------HHhCCCCCeEEEEec--cCCCC-----------------------
Confidence 5777777778888888877766554322 222344555444332 33211
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEecc-ccccCCCCcc--HHHHHHHHhccC--CCceEEecC
Q 022982 182 EDVDLLIRRAERCLEAGADMIMIDSD-DVCKHADSLR--ADIIAKVIGRLG--LEKTMFEAT 238 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiEar-GI~d~~G~~r--~d~v~~ii~~l~--~eklifEAP 238 (289)
.+.+--+.+++..+++||+-|=+==. |-+. +|++. .+.+..+.+..+ +=|+|+|..
T Consensus 92 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~ 152 (239)
T 3ngj_A 92 TPSEVKAYETKVAVEQGAEEVDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECC 152 (239)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGG
T ss_pred CchHHHHHHHHHHHHcCCCEEEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 12455577788888888876643222 2111 23322 334444554443 346777765
No 430
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=54.78 E-value=60 Score=28.88 Aligned_cols=104 Identities=11% Similarity=0.141 Sum_probs=63.5
Q ss_pred ChhHHHHHHHHHHhC--Cce-ec-----C-CcHH-HHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHH
Q 022982 68 PKPFIEEVVKRAHQH--DVY-VS-----T-GDWA-EHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYV 136 (289)
Q Consensus 68 p~~~l~eKI~l~~~~--gV~-v~-----~-Gtlf-E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI 136 (289)
+.+.+.+-+..++++ +++ ++ . ||-+ +.- .+..-++++.+-++| +++|.|-- ..+. ...+++
T Consensus 61 ~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~----~~~~~~ll~~~~~~g~~d~iDvEl---~~~~-~~~~l~ 132 (257)
T 2yr1_A 61 DQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLN----EAEVRRLIEAICRSGAIDLVDYEL---AYGE-RIADVR 132 (257)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSC----HHHHHHHHHHHHHHTCCSEEEEEG---GGTT-HHHHHH
T ss_pred cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCC----HHHHHHHHHHHHHcCCCCEEEEEC---CCCh-hHHHHH
Confidence 345677777777765 442 22 1 5533 211 113345566667788 99988753 2344 666889
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEE
Q 022982 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMI 204 (289)
Q Consensus 137 ~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~Vii 204 (289)
+.+++.|-+++--++- ...++ +.+++++..++..+.|||.|=+
T Consensus 133 ~~~~~~~~kvI~S~Hd---f~~tP----------------------~~~el~~~~~~~~~~gaDivKi 175 (257)
T 2yr1_A 133 RMTEECSVWLVVSRHY---FDGTP----------------------RKETLLADMRQAERYGADIAKV 175 (257)
T ss_dssp HHHHHTTCEEEEEEEE---SSCCC----------------------CHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCCEEEEEecC---CCCCc----------------------CHHHHHHHHHHHHhcCCCEEEE
Confidence 9888887776554443 11111 2467888889999999996544
No 431
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=54.73 E-value=71 Score=29.82 Aligned_cols=55 Identities=25% Similarity=0.266 Sum_probs=34.5
Q ss_pred ccEEEecCccccccChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022982 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (289)
+|++=+. ++.-+| +.+.+.|+.++++ ++++..|+- . . .+..+.+.+.|.|+|-|+
T Consensus 166 ~d~i~i~--~~~g~~-~~~~e~i~~ir~~~~~~pviv~~v-------~--~-~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 166 VDILVID--SAHGHS-TRIIELIKKIKTKYPNLDLIAGNI-------V--T-KEAALDLISVGADCLKVG 222 (404)
T ss_dssp CSEEEEC--CSCCSS-HHHHHHHHHHHHHCTTCEEEEEEE-------C--S-HHHHHHHHTTTCSEEEEC
T ss_pred CCEEEEe--CCCCCh-HHHHHHHHHHHHHCCCCeEEEcCC-------C--c-HHHHHHHHhcCCCEEEEC
Confidence 5666552 111234 5678888888887 888775310 0 1 234456678999999994
No 432
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=54.62 E-value=30 Score=29.44 Aligned_cols=96 Identities=8% Similarity=0.010 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHHhCCcee---cCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHH
Q 022982 69 KPFIEEVVKRAHQHDVYV---STG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVR 137 (289)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v---~~G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti------~i~~~~r~~lI~ 137 (289)
++.+++-++.+|++|+.+ ..| |. |- . +.+.++|+|++=+.-|+. ..+.+ -.+.|+
T Consensus 95 ~~~~~~~~~~~~~~g~~~~~d~l~~~T~-~~--------~----~~~~~~g~d~v~~~~~~~~~~~g~~~~~~-~l~~i~ 160 (218)
T 3jr2_A 95 IATIAACKKVADELNGEIQIEIYGNWTM-QD--------A----KAWVDLGITQAIYHRSRDAELAGIGWTTD-DLDKMR 160 (218)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCSSCCH-HH--------H----HHHHHTTCCEEEEECCHHHHHHTCCSCHH-HHHHHH
T ss_pred HHHHHHHHHHHHHhCCccceeeeecCCH-HH--------H----HHHHHcCccceeeeeccccccCCCcCCHH-HHHHHH
Confidence 456788888899999855 444 43 21 1 122345999876533221 12233 245666
Q ss_pred HHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCC
Q 022982 138 LVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHA 213 (289)
Q Consensus 138 ~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~ 213 (289)
+++...+.+....|++. +.++..++|||+.|++= +.|++..
T Consensus 161 ~~~~~~~pi~v~GGI~~----------------------------------~~~~~~~~aGAd~vvvG-saI~~a~ 201 (218)
T 3jr2_A 161 QLSALGIELSITGGIVP----------------------------------EDIYLFEGIKTKTFIAG-RALAGAE 201 (218)
T ss_dssp HHHHTTCEEEEESSCCG----------------------------------GGGGGGTTSCEEEEEES-GGGSHHH
T ss_pred HHhCCCCCEEEECCCCH----------------------------------HHHHHHHHcCCCEEEEc-hhhcCCC
Confidence 66654555555556521 12233679999999885 5687653
No 433
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=54.53 E-value=12 Score=37.46 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=37.7
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 103 FKEYVEDCKQVGFDTIELNV-----------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+.+-++++++|||++|.++= |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 115 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~ 185 (628)
T 1g5a_A 115 LKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIF 185 (628)
T ss_dssp HHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 44556888999999999862 3221 2 2588999999999999999866633
No 434
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=54.47 E-value=12 Score=39.47 Aligned_cols=48 Identities=13% Similarity=0.235 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCEEEecC-----------------Cc-----------ccCC------hhHHHHHHHHHHHcCCccccee
Q 022982 105 EYVEDCKQVGFDTIELNV-----------------GS-----------LEIP------EETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd-----------------Gt-----------i~i~------~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+-+.++|+|||++||++= |. ..++ .++..++|+.+.++|++|+=.+
T Consensus 473 ~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 473 TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp CHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 347888999999999871 10 1222 4899999999999999998776
Q ss_pred ee
Q 022982 151 AV 152 (289)
Q Consensus 151 g~ 152 (289)
-.
T Consensus 553 V~ 554 (921)
T 2wan_A 553 VY 554 (921)
T ss_dssp CT
T ss_pred cc
Confidence 44
No 435
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=54.46 E-value=13 Score=36.79 Aligned_cols=46 Identities=20% Similarity=0.263 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecC---------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022982 107 VEDCKQVGFDTIELNV---------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 107 l~~~k~lGF~~IEISd---------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
|+++++|||++|.+|- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 46 Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 46 LEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp HHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5788999999999852 32221 3688999999999999999876644
No 436
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=54.46 E-value=34 Score=32.22 Aligned_cols=83 Identities=23% Similarity=0.266 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHcCCCEEEe--------cCCcccCChh-HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022982 101 SAFKEYVEDCKQVGFDTIEL--------NVGSLEIPEE-TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEI--------SdGti~i~~~-~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~ 171 (289)
+.+.+.++++.++|..+|=+ ..|+-..+++ --++.|+.+|+. .||+.+ .++|.
T Consensus 58 d~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~~g~v~rair~iK~~----~pdl~v---itDvc----------- 119 (323)
T 1l6s_A 58 KHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQT----VPEMIV---MSDTC----------- 119 (323)
T ss_dssp GGHHHHHHHHHHHTCCEEEEEEECSSCBSSCGGGGSTTSHHHHHHHHHHHH----CTTSEE---EEEEC-----------
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCccccccCCCCCcHHHHHHHHHHH----CCCeEE---EEeee-----------
Q ss_pred ccCCCCccc------------cccHHHHHHHHHHHHHccCcEE
Q 022982 172 ARAPRSTEY------------VEDVDLLIRRAERCLEAGADMI 202 (289)
Q Consensus 172 ~~~~~~~~~------------~~~~~~~I~~~~~dLeAGA~~V 202 (289)
=-+.+++| -.|++.+.+++-..-+||||.|
T Consensus 120 -Lc~YT~HGHcGil~~g~V~ND~Tl~~Lak~Als~A~AGAdiV 161 (323)
T 1l6s_A 120 -FCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFI 161 (323)
T ss_dssp -STTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred -ccccCCCCceEeccCCcCccHHHHHHHHHHHHHHHHcCCCeE
No 437
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=54.39 E-value=13 Score=30.92 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=21.0
Q ss_pred HHHHHHHHHHc--CCCEEEecCCcccCChhHHHHHHHHHHHc
Q 022982 103 FKEYVEDCKQV--GFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (289)
Q Consensus 103 ~~~yl~~~k~l--GF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (289)
+++.++.++++ |.+++||.+++. ...=...|+.+++.
T Consensus 12 ~~~~~~~~~~~~~~v~~iev~~~~~---~~~g~~~i~~l~~~ 50 (207)
T 3ajx_A 12 TEAALELAGKVAEYVDIIELGTPLI---KAEGLSVITAVKKA 50 (207)
T ss_dssp HHHHHHHHHHHGGGCSEEEECHHHH---HHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCEEEECcHHH---HhhCHHHHHHHHHh
Confidence 44444444433 669999977652 12223467777764
No 438
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=53.99 E-value=6.7 Score=34.87 Aligned_cols=102 Identities=11% Similarity=0.156 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCc------eecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH--HHHHHHHH
Q 022982 71 FIEEVVKRAHQHDV------YVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL--LRYVRLVK 140 (289)
Q Consensus 71 ~l~eKI~l~~~~gV------~v~~G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r--~~lI~~~~ 140 (289)
...+-++.|+++|| .+.|| |.-|+.- +.++|+|+|-+- |.+.- ..+|+.++
T Consensus 94 ~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~-------------A~~~Gad~vK~F------Pa~~~gG~~~lkal~ 154 (217)
T 3lab_A 94 LTPELIEKAKQVKLDGQWQGVFLPGVATASEVMI-------------AAQAGITQLKCF------PASAIGGAKLLKAWS 154 (217)
T ss_dssp CCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHH-------------HHHTTCCEEEET------TTTTTTHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHH-------------HHHcCCCEEEEC------ccccccCHHHHHHHH
Confidence 34567778888888 88887 6666553 357899999764 32221 46777777
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccC----CCCc
Q 022982 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKH----ADSL 216 (289)
Q Consensus 141 ~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~----~G~~ 216 (289)
.- +|.+-. ..+| + + + .+.+...|++||..+.. +.-++.. +|+
T Consensus 155 ~p----~p~i~~----~ptG--G-----------------I-~----~~N~~~~l~aGa~~~vg-Gs~l~~~~~i~~~~- 200 (217)
T 3lab_A 155 GP----FPDIQF----CPTG--G-----------------I-S----KDNYKEYLGLPNVICAG-GSWLTESKLLIEGD- 200 (217)
T ss_dssp TT----CTTCEE----EEBS--S-----------------C-C----TTTHHHHHHSTTBCCEE-ESGGGCHHHHHHTC-
T ss_pred hh----hcCceE----EEeC--C-----------------C-C----HHHHHHHHHCCCEEEEE-ChhhcChhHHhcCC-
Confidence 62 232222 1111 0 0 0 25678899999988876 5545543 354
Q ss_pred cHHHHHHHHh
Q 022982 217 RADIIAKVIG 226 (289)
Q Consensus 217 r~d~v~~ii~ 226 (289)
.+.|.+.++
T Consensus 201 -~~~i~~~a~ 209 (217)
T 3lab_A 201 -WNEVTRRAS 209 (217)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 455665554
No 439
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=53.75 E-value=31 Score=29.83 Aligned_cols=89 Identities=9% Similarity=-0.030 Sum_probs=56.8
Q ss_pred cccccChhHHHHHHHHHHhCCceecC-C-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEE
Q 022982 63 SHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTI 118 (289)
Q Consensus 63 Ts~l~p~~~l~eKI~l~~~~gV~v~~-G-tlfE~a~~qg~~~~~~yl~~~k~lGF----------------------~~I 118 (289)
...+..++.+....++++++++.+.- - -+-|.....+...+.+.++.++++|| |.|
T Consensus 113 ~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDDfG~g~ssl~~L~~l~~d~i 192 (268)
T 3hv8_A 113 SASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFI 192 (268)
T ss_dssp HHHHTCTTHHHHHHHHHHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSTTGGGGTCCCSEE
T ss_pred HHHhcCchHHHHHHHHHHHcCCChhhEEEEEEcHHHHhCHHHHHHHHHHHHHCCCEEEEeCCCCChHHHHHHHhCCCCEE
Confidence 34466667777777888888764332 1 24576766655577788888887775 556
Q ss_pred EecCCccc-CChh----HHHHHHHHHHHcCCcccceeee
Q 022982 119 ELNVGSLE-IPEE----TLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 119 EISdGti~-i~~~----~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-|+-.++. +..+ .-..+|..+++.|.+|.-| ||
T Consensus 193 KiD~~~v~~~~~~~~~~~l~~ii~~~~~~~~~viae-GV 230 (268)
T 3hv8_A 193 KIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVP-FV 230 (268)
T ss_dssp EECGGGGSSTTSHHHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred EECHHHHHhhhcChhHHHHHHHHHHHHHcCCCEEEE-ee
Confidence 66554442 2222 2345677888888887777 66
No 440
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=53.66 E-value=9.8 Score=33.91 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--cCC---------------hhHHHHHHHHHHHcCCccccee
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSL--EIP---------------EETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~i~---------------~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
.+++-++.+|++||++|-+.-..- .-| .+...++|+.++++|++|+-++
T Consensus 46 ~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 46 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 688899999999999999853211 001 1234579999999999999887
No 441
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}
Probab=53.62 E-value=15 Score=33.38 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHhCCceecC--CcHHHHHHHhCCc----hHHHHHHHHHHcCCCEEEec
Q 022982 69 KPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPS----AFKEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v~~--GtlfE~a~~qg~~----~~~~yl~~~k~lGF~~IEIS 121 (289)
...+++.|..+|+.|++|.. |||--... ..+. -++.+.+.+++.|||.|.|.
T Consensus 82 ~~~~~~~i~~~~~~g~kvllSiGG~~~~~~-~~~~~r~~F~~s~~~~l~~ygfDGiDiD 139 (328)
T 4axn_A 82 DTEFRRQVGVLNSQGRAVLISLGGADAHIE-LKTGDEDKLKDEIIRLVEVYGFDGLDID 139 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEETTCCCC-CCTTCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCcc-CChHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 45689999999999997753 77631111 1111 25677788899999999884
No 442
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=53.43 E-value=14 Score=36.85 Aligned_cols=49 Identities=18% Similarity=0.175 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCCEEEecC---------------Cccc---------CC---------hhHHHHHHHHHHHcCCcccce
Q 022982 103 FKEYVEDCKQVGFDTIELNV---------------GSLE---------IP---------EETLLRYVRLVKSAGLKAKPK 149 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd---------------Gti~---------i~---------~~~r~~lI~~~~~~G~~v~~E 149 (289)
+.+-+.++|+|||++|+++- |.-. .. .++..++|+.+.++|++|+-.
T Consensus 122 ~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 122 MMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 45668899999999999872 2211 11 489999999999999999877
Q ss_pred ee
Q 022982 150 FA 151 (289)
Q Consensus 150 ~g 151 (289)
+-
T Consensus 202 ~V 203 (637)
T 1gjw_A 202 FI 203 (637)
T ss_dssp EC
T ss_pred EC
Confidence 63
No 443
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=53.35 E-value=12 Score=37.64 Aligned_cols=47 Identities=9% Similarity=0.085 Sum_probs=36.0
Q ss_pred HHHHH--HHHHcCCCEEEecCCcc-------------------------cC-----ChhHHHHHHHHHHHcCCccccee
Q 022982 104 KEYVE--DCKQVGFDTIELNVGSL-------------------------EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 104 ~~yl~--~~k~lGF~~IEISdGti-------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
.+-|+ ++|+|||++|.++==+- .+ +.++..++|+.+.++|++|+-.+
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 34466 77999999999984111 11 36899999999999999988766
No 444
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=52.99 E-value=17 Score=36.26 Aligned_cols=48 Identities=15% Similarity=0.202 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----c---------C-----ChhHHHHHHHHHHHcCCccccee
Q 022982 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----E---------I-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~---------i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+.+-++++++|||++|.++= |.- + + +.++..++|+.+.++|++|+-.+
T Consensus 152 i~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 152 LAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 33446788999999999972 110 0 2 35789999999999999987665
No 445
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=52.86 E-value=9.8 Score=34.41 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=41.5
Q ss_pred hhHHHHHHHhhcccccE-------EEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHH
Q 022982 40 HNVLEDIFESMGQFVDG-------LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQ 112 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~-------lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~ 112 (289)
....+.+.+.-.+.|+. .|...|+..+-..+.+++. .+..++++..+... + . .+..+.+.+
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I---~~~~~iPv~~k~r~------g--~-~~~~~~~~a 98 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEV---MNAVSIPVMAKARI------G--H-IVEARVLEA 98 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHH---HHHCSSCEEEEECT------T--C-HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHH---HHhCCCCEEecccc------c--c-hHHHHHHHH
Confidence 44666666655677743 3555565555555555543 45667876533110 0 0 344566677
Q ss_pred cCCCEEEecCCcccCChhH
Q 022982 113 VGFDTIELNVGSLEIPEET 131 (289)
Q Consensus 113 lGF~~IEISdGti~i~~~~ 131 (289)
.|.|.|- ++-.++.++
T Consensus 99 ~GAd~V~---~~~~l~~~~ 114 (305)
T 2nv1_A 99 MGVDYID---ESEVLTPAD 114 (305)
T ss_dssp HTCSEEE---ECTTSCCSC
T ss_pred CCCCEEE---EeccCCHHH
Confidence 9999995 333445544
No 446
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=52.67 E-value=53 Score=31.11 Aligned_cols=140 Identities=16% Similarity=0.104 Sum_probs=83.1
Q ss_pred HHHHHHHHhCCceecC----Cc------HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHH
Q 022982 73 EEVVKRAHQHDVYVST----GD------WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVK 140 (289)
Q Consensus 73 ~eKI~l~~~~gV~v~~----Gt------lfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~ 140 (289)
.--..++++++|+|.. |. |++-++. ...++++.|-+.||+.|=|.--..++.+- .=.++++++.
T Consensus 77 ~~v~~~A~~~~VPVaLHlDHg~~~~ld~~~~~~l~----~~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah 152 (349)
T 3elf_A 77 EFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLA----ISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAA 152 (349)
T ss_dssp HHHHHHHTTSSSCEEEEECCCCGGGGGGTHHHHHH----HHHHHHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCcccchhhhhhHH----HHHHHHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 3345678899999985 42 3443332 23566777778899999996655544322 2236788888
Q ss_pred HcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHH--HHccCcEEEEe---cccccc-CCC
Q 022982 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERC--LEAGADMIMID---SDDVCK-HAD 214 (289)
Q Consensus 141 ~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~d--LeAGA~~ViiE---arGI~d-~~G 214 (289)
..|.-|--|+|.= |-++|..- . . . .+....||++..+.+++- ...|.|.+=+= +-|+|. .+-
T Consensus 153 ~~gvsVEaElG~i------GG~Edgv~-~--~--~-~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p 220 (349)
T 3elf_A 153 AAKIILEIEIGVV------GGEEDGVA-N--E--I-NEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNV 220 (349)
T ss_dssp HTTCEEEEEESCC------BC-------------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSS
T ss_pred HcCCeEEEEeecc------ccccCCcc-c--c--c-ccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCC
Confidence 9999999999972 11222100 0 0 0 001112688887777642 12347766553 238997 455
Q ss_pred CccHHHHHHHHhcc
Q 022982 215 SLRADIIAKVIGRL 228 (289)
Q Consensus 215 ~~r~d~v~~ii~~l 228 (289)
.++.+.+.+|-+.+
T Consensus 221 ~L~~~~L~~I~~~v 234 (349)
T 3elf_A 221 KLRPDILAQGQQVA 234 (349)
T ss_dssp CCCTHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHH
Confidence 78899988887544
No 447
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=52.63 E-value=15 Score=35.88 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022982 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+=++++++|||++|.++- |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 101 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVI 101 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 346788999999999852 2211 1 3688999999999999999876644
No 448
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=52.52 E-value=16 Score=33.40 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=31.8
Q ss_pred HHHHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHcCCccc
Q 022982 103 FKEYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAK 147 (289)
Q Consensus 103 ~~~yl~~~k~l-GF~~IEISdGti----~i~~~~r~~lI~~~~~~G~~v~ 147 (289)
.+.-++.++++ ||+.||+.-.-+ .++.++..++-+.+++.||++.
T Consensus 23 ~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~ 72 (367)
T 1tz9_A 23 DAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALL 72 (367)
T ss_dssp CCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEE
Confidence 44457788888 999998763322 3455677778888888888865
No 449
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=52.44 E-value=16 Score=33.78 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=38.7
Q ss_pred cccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc
Q 022982 65 SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (289)
Q Consensus 65 ~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti 125 (289)
..-..+.|++.|+.++++||.||. |. + --.+-++.++++|.++||+-.|..
T Consensus 137 v~~~~~~L~~~i~~L~~~GIrVSL--FI------D--pd~~qI~aA~~~GAd~IELhTG~Y 187 (278)
T 3gk0_A 137 VVGHFDAVRAACKQLADAGVRVSL--FI------D--PDEAQIRAAHETGAPVIELHTGRY 187 (278)
T ss_dssp TTTTHHHHHHHHHHHHHTTCEEEE--EE------C--SCHHHHHHHHHHTCSEEEECCHHH
T ss_pred hhccHHHHHHHHHHHHHCCCEEEE--Ee------C--CCHHHHHHHHHhCcCEEEEecchh
Confidence 345667899999999999999984 11 2 123457788999999999987744
No 450
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=52.37 E-value=1e+02 Score=27.93 Aligned_cols=103 Identities=21% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCceeEecCCCCCCCchhHHHHHHHh------------------------------------------------------
Q 022982 24 FGVTEMRSPHYTLSSSHNVLEDIFES------------------------------------------------------ 49 (289)
Q Consensus 24 ~GlT~V~DkGl~~~~g~~~~~DlLe~------------------------------------------------------ 49 (289)
.|+|-|+|.|- ....+++.++.
T Consensus 100 ~GvTtv~d~~~----~~~~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (426)
T 2r8c_A 100 RGFTTVRDAGG----AGYPFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVD 175 (426)
T ss_dssp TTEEEEEECSS----CCHHHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHH
T ss_pred CCeEEEEeCCC----chHHHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccccccccccccCCHH
Q ss_pred ---------hcccccEEEecCc----------cccccChhHHHHHHHHHHhCCceecC--CcHHHHHHHhCCchHHHHHH
Q 022982 50 ---------MGQFVDGLKFSGG----------SHSLMPKPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPSAFKEYVE 108 (289)
Q Consensus 50 ---------ag~yID~lKfg~G----------Ts~l~p~~~l~eKI~l~~~~gV~v~~--GtlfE~a~~qg~~~~~~yl~ 108 (289)
...-.|.+|+-.. ....++++.+++.++.+|++|+++.. .+.-+ ++
T Consensus 176 ~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~-------------i~ 242 (426)
T 2r8c_A 176 EVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAA-------------IA 242 (426)
T ss_dssp HHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHH-------------HH
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHH-------------HH
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 022982 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
.+-+.|.+.||=..-.-+ +.++++++.|..+.|.+
T Consensus 243 ~al~~G~~~i~H~~~~~~-------~~~~~~~~~gv~~~pt~ 277 (426)
T 2r8c_A 243 RAVRCGVRTIEHGNLIDD-------ETARLVAEHGAYVVPTL 277 (426)
T ss_dssp HHHHTTCSEEEECTTCCH-------HHHHHHHHTTCEEECCT
T ss_pred HHHHcCCCEEecCCcCCH-------HHHHHHHHcCCeEeech
No 451
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=52.30 E-value=86 Score=29.96 Aligned_cols=66 Identities=18% Similarity=0.148 Sum_probs=38.0
Q ss_pred hhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022982 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (289)
Q Consensus 40 ~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (289)
...++.+++.- +|++=|. |+.-.|+ .+.+.|+.+++. ++++..|+- . . .+-.+.+.+.|.|+|
T Consensus 146 ~e~~~~lveaG---vdvIvld--ta~G~~~-~~~e~I~~ik~~~~i~Vi~g~V-------~--t-~e~A~~a~~aGAD~I 209 (400)
T 3ffs_A 146 IERAKLLVEAG---VDVIVLD--SAHGHSL-NIIRTLKEIKSKMNIDVIVGNV-------V--T-EEATKELIENGADGI 209 (400)
T ss_dssp CHHHHHHHHHT---CSEEEEC--CSCCSBH-HHHHHHHHHHTTCCCEEEEEEE-------C--S-HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcC---CCEEEEe--CCCCCcc-cHHHHHHHHHhcCCCeEEEeec-------C--C-HHHHHHHHHcCCCEE
Confidence 34566666643 5666441 2223443 466677766664 998876521 0 1 122345677899999
Q ss_pred Eec
Q 022982 119 ELN 121 (289)
Q Consensus 119 EIS 121 (289)
=++
T Consensus 210 ~vG 212 (400)
T 3ffs_A 210 KVG 212 (400)
T ss_dssp EEC
T ss_pred EEe
Confidence 994
No 452
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=52.30 E-value=23 Score=32.00 Aligned_cols=52 Identities=10% Similarity=0.034 Sum_probs=38.3
Q ss_pred CchHHHHHHHHHHcCCCEEEecC---Cc---c-----cCC---hhHHHHHHHHHHHcCCcccceee
Q 022982 100 PSAFKEYVEDCKQVGFDTIELNV---GS---L-----EIP---EETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISd---Gt---i-----~i~---~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
++.+++.++.+|++||++|-+.- |. + ..+ .+..-++|+.++++|++|.-++.
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~ 106 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLV 106 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 45799999999999999999753 21 1 111 22335688999999999988765
No 453
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=52.17 E-value=30 Score=30.06 Aligned_cols=119 Identities=19% Similarity=0.215 Sum_probs=74.8
Q ss_pred HHHHHHHhhcc-----cccEEEecCccccccChhHHHHHHHHHHhCCc----eecCC--cHHHHHHHhCCc---------
Q 022982 42 VLEDIFESMGQ-----FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVSTG--DWAEHLIRNGPS--------- 101 (289)
Q Consensus 42 ~~~DlLe~ag~-----yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV----~v~~G--tlfE~a~~qg~~--------- 101 (289)
.|+++|+.+.+ +|| +|-.. ...+...+.-+++.++++. .++.- ..+..+-...|+
T Consensus 101 tL~evL~~~~~~~~~l~iE-iK~~~----~~~~~~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~ 175 (252)
T 2pz0_A 101 TLYEVFELIGDKDFLVNIE-IKSGI----VLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQC 175 (252)
T ss_dssp BHHHHHHHHTTSCCEEEEE-ECCSS----CCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECS
T ss_pred CHHHHHHHhhhcCCeEEEE-eCCCC----cccHHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecC
Confidence 78999988743 444 36321 1223456777888888874 23322 234444444332
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
...++.+.++.+|.+.+-++-..++ .++|+.++++|++|.+ .++.
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~-wTvn---------------------------- 220 (252)
T 2pz0_A 176 GLVEPWHMALRMEAYSLHPFYFNII------PELVEGCKKNGVKLFP-WTVD---------------------------- 220 (252)
T ss_dssp BCSSTHHHHHHTTCSEEEEBGGGCC------HHHHHHHHHTTCEECC-BCCC----------------------------
T ss_pred ccccHHHHHHHcCCeEEecchhcCC------HHHHHHHHHCCCEEEE-ECCC----------------------------
Confidence 1234567788999999887754442 4789999999988755 2220
Q ss_pred ccHHHHHHHHHHHHHccCcEEEEe
Q 022982 182 EDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
+ .+.+++.++.|+|-||..
T Consensus 221 -~----~~~~~~l~~~GvdgIiTD 239 (252)
T 2pz0_A 221 -R----KEDMERMIKAGVDGIITD 239 (252)
T ss_dssp -S----HHHHHHHHHHTCSEEEES
T ss_pred -C----HHHHHHHHHcCCCEEEcC
Confidence 1 245677889999999874
No 454
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=52.02 E-value=52 Score=28.67 Aligned_cols=124 Identities=15% Similarity=0.214 Sum_probs=74.1
Q ss_pred hhHHHHHHHhhccc-ccEEEecCccccccChhHHHHHHH-HHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 40 HNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVK-RAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 40 ~~~~~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~-l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
+..+.++.+.+-+. ||.+.+.+=+. .-.+.|+ +++++ ++.+--||.+ ..+-++.|.+.|-|
T Consensus 28 ~~~~~~~~~al~~gGv~~iel~~k~~------~~~~~i~~l~~~~~~l~vgaGtvl----------~~d~~~~A~~aGAd 91 (224)
T 1vhc_A 28 ADDILPLADTLAKNGLSVAEITFRSE------AAADAIRLLRANRPDFLIAAGTVL----------TAEQVVLAKSSGAD 91 (224)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTST------THHHHHHHHHHHCTTCEEEEESCC----------SHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccCc------hHHHHHHHHHHhCcCcEEeeCcEe----------eHHHHHHHHHCCCC
Confidence 33555555555555 88888885331 2344555 66666 3443335532 13567788888999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHH
Q 022982 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (289)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLe 196 (289)
.| +|-++. ..+++.+++.|..++| |+. | .+++.+.++
T Consensus 92 ~v-~~p~~d-------~~v~~~ar~~g~~~i~--Gv~-----------------------------t----~~e~~~A~~ 128 (224)
T 1vhc_A 92 FV-VTPGLN-------PKIVKLCQDLNFPITP--GVN-----------------------------N----PMAIEIALE 128 (224)
T ss_dssp EE-ECSSCC-------HHHHHHHHHTTCCEEC--EEC-----------------------------S----HHHHHHHHH
T ss_pred EE-EECCCC-------HHHHHHHHHhCCCEEe--ccC-----------------------------C----HHHHHHHHH
Confidence 99 554432 3677888888777766 441 1 244566779
Q ss_pred ccCcEEEEeccccccCCCCc-cHHHHHHHHhcc
Q 022982 197 AGADMIMIDSDDVCKHADSL-RADIIAKVIGRL 228 (289)
Q Consensus 197 AGA~~ViiEarGI~d~~G~~-r~d~v~~ii~~l 228 (289)
+|||+|.+ |-. ... -.+.+.++...+
T Consensus 129 ~Gad~vk~-----Fpa-~~~gG~~~lk~l~~~~ 155 (224)
T 1vhc_A 129 MGISAVKF-----FPA-EASGGVKMIKALLGPY 155 (224)
T ss_dssp TTCCEEEE-----TTT-TTTTHHHHHHHHHTTT
T ss_pred CCCCEEEE-----eeC-ccccCHHHHHHHHhhC
Confidence 99999998 331 112 255666665544
No 455
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=51.92 E-value=29 Score=30.52 Aligned_cols=101 Identities=14% Similarity=0.026 Sum_probs=64.1
Q ss_pred hHHHHHHHhhcccccEE-EecC---ccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 41 NVLEDIFESMGQFVDGL-KFSG---GSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~l-Kfg~---GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+.++-++.-++=||++ =+|+ |....+- +.|++-.+.|+++.++|-.- .++.. ++.+..-.+.|.++|-|
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~-~ei~~v~~a~~~~~lkvIle----t~~l~-~e~i~~a~~ia~eaGAD 148 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGDLDYLE-AEVRAVREAVPQAVLKVILE----TGYFS-PEEIARLAEAAIRGGAD 148 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHH-HHHHHHHHHSTTSEEEEECC----GGGSC-HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCCHHHHH-HHHHHHHHHHcCCCceEEEe----cCCCC-HHHHHHHHHHHHHhCCC
Confidence 57789999999999995 3553 2222222 24666677777766675543 22222 34677888899999999
Q ss_pred EEEecCCcccC--ChhHHHHHHHHHHHcCCcccceeeeec
Q 022982 117 TIELNVGSLEI--PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (289)
Q Consensus 117 ~IEISdGti~i--~~~~r~~lI~~~~~~G~~v~~E~g~k~ 154 (289)
.|-.|.|+..- +.++- ++++++.. +.+++|-
T Consensus 149 fVKTsTGf~~~gat~~dv-~~m~~~vg------~~v~Vka 181 (220)
T 1ub3_A 149 FLKTSTGFGPRGASLEDV-ALLVRVAQ------GRAQVKA 181 (220)
T ss_dssp EEECCCSSSSCCCCHHHH-HHHHHHHT------TSSEEEE
T ss_pred EEEeCCCCCCCCCCHHHH-HHHHHhhC------CCCeEEE
Confidence 99999998743 33332 34444322 3467764
No 456
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=51.86 E-value=19 Score=33.06 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=43.4
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc--------CCh---hHHHHHHHHHHHcCCcccceeee
Q 022982 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE--------IPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 92 fE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~--------i~~---~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+|..+. +|...++.++.++++||++|-|.-+.-. +++ +...++|+.++++|++|+-.++-
T Consensus 53 ~e~~W~-~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~ 123 (380)
T 1edg_A 53 YETSWS-GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHH 123 (380)
T ss_dssp HHHHTT-CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ccCcCC-CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCC
Confidence 466653 3345688999999999999999643221 222 34467899999999999877764
No 457
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=51.83 E-value=49 Score=31.15 Aligned_cols=26 Identities=8% Similarity=-0.061 Sum_probs=21.3
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccc
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDD 208 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarG 208 (289)
+.++.++.++..-++|+++|-+=+++
T Consensus 264 ~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 264 PEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 46778888888889999999887654
No 458
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=51.66 E-value=25 Score=32.34 Aligned_cols=135 Identities=19% Similarity=0.244 Sum_probs=81.9
Q ss_pred HHcCCCEEEecCCc-----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 111 KQVGFDTIELNVGS-----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 111 k~lGF~~IEISdGt-----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+.||++|=+|+.. ..++.++....++.+.+. -. +| +-+. .+.| |
T Consensus 34 ~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~-~~-~P-viaD---~d~G------y------------ 89 (295)
T 1xg4_A 34 QRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDV-CS-LP-LLVD---ADIG------F------------ 89 (295)
T ss_dssp HHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHH-CC-SC-EEEE---CTTC------S------------
T ss_pred HHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhh-CC-CC-EEec---CCcc------c------------
Confidence 45699999998762 257888888888888773 11 23 2221 1111 1
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEecc-c-----------cccC---------------CCCc----cH---------H
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSD-D-----------VCKH---------------ADSL----RA---------D 219 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEar-G-----------I~d~---------------~G~~----r~---------d 219 (289)
-.++.+..+.+++.++|||.-|-||.- + ++.. .+.. |+ +
T Consensus 90 -g~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ 168 (295)
T 1xg4_A 90 -GSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDA 168 (295)
T ss_dssp -SSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHH
T ss_pred -CCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHH
Confidence 014888999999999999999999984 1 1100 1111 22 2
Q ss_pred HHHHH--HhccCCCceEEecCC-chhHHHHHHHhCCCc--cccc-CCCCchhhhhhh
Q 022982 220 IIAKV--IGRLGLEKTMFEATN-PRTSEWFIRRYGPKV--NLFV-DHSQVMDLECLR 270 (289)
Q Consensus 220 ~v~~i--i~~l~~eklifEAP~-k~qQ~~~I~~fG~~V--NLgI-~~~eVl~LE~LR 270 (289)
.++.. ....|.+-|..|++. .++-..+-+.+.-=| |+-+ ..+..+..+.|.
T Consensus 169 ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~ 225 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELR 225 (295)
T ss_dssp HHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHH
Confidence 22222 245689999999985 467777778776445 4422 123345555555
No 459
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=51.33 E-value=22 Score=33.33 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=47.7
Q ss_pred ccChhHHHHHHHHHHhCCceec----CC--cH-HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc--------ccCChh
Q 022982 66 LMPKPFIEEVVKRAHQHDVYVS----TG--DW-AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS--------LEIPEE 130 (289)
Q Consensus 66 l~p~~~l~eKI~l~~~~gV~v~----~G--tl-fE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt--------i~i~~~ 130 (289)
.+|.+.|++-|+....++..+. +. +| +|+-. -+ ... . .++.=+.|. --.+.+
T Consensus 29 f~~~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~-~~-~~~-------~----~~~~~~~g~~~~~~~~~g~YT~~ 95 (367)
T 1yht_A 29 FYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHL-LN-QRA-------E----NAVQGKDGIYINPYTGKPFLSYR 95 (367)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTT-TT-BCG-------G----GSEECTTSCEECTTTCCEEBCHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecc-hh-hhh-------h----hhccccCCCcCCCCCCCCCcCHH
Confidence 5778899999999988888544 22 44 44311 00 000 0 000001221 248999
Q ss_pred HHHHHHHHHHHcCCcccceeee
Q 022982 131 TLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 131 ~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
+-.++++.|+++|..|+||+-.
T Consensus 96 di~eiv~YA~~rgI~VIPEID~ 117 (367)
T 1yht_A 96 QLDDIKAYAKAKGIELIPELDS 117 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeccc
Confidence 9999999999999999999965
No 460
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=51.27 E-value=16 Score=32.01 Aligned_cols=21 Identities=24% Similarity=0.392 Sum_probs=17.5
Q ss_pred HHHHccCcEEEEeccccccCCC
Q 022982 193 RCLEAGADMIMIDSDDVCKHAD 214 (289)
Q Consensus 193 ~dLeAGA~~ViiEarGI~d~~G 214 (289)
..+++|||+++| +|+||.+..
T Consensus 175 ~a~~~Gad~iVV-GR~I~~A~d 195 (222)
T 4dbe_A 175 DAVCAGADYEII-GRSIYNAGN 195 (222)
T ss_dssp HHHHHTCSEEEE-CHHHHTSSS
T ss_pred HHHHcCCCEEEE-CHHhcCCCC
Confidence 345799999888 999999875
No 461
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=51.11 E-value=44 Score=29.12 Aligned_cols=19 Identities=11% Similarity=0.085 Sum_probs=12.2
Q ss_pred hHHHHHHHHHHcCCCEEEe
Q 022982 102 AFKEYVEDCKQVGFDTIEL 120 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEI 120 (289)
.+++.++.|+++|.+.|-+
T Consensus 106 ~~~~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 106 KEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 4566666666666666655
No 462
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=51.01 E-value=6.2 Score=35.57 Aligned_cols=91 Identities=10% Similarity=0.145 Sum_probs=59.9
Q ss_pred ceeEecCCCCCCCc-hhHHHHHHHhhcccccEEEecCccccccChh---HHHHHHHHHHhCCceecCC-cHHHHHHHhCC
Q 022982 26 VTEMRSPHYTLSSS-HNVLEDIFESMGQFVDGLKFSGGSHSLMPKP---FIEEVVKRAHQHDVYVSTG-DWAEHLIRNGP 100 (289)
Q Consensus 26 lT~V~DkGl~~~~g-~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~---~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~ 100 (289)
|-.=+||-....+. .+....+++..++|++++|.|..-..-+..+ .|++.++.++ .|..|..- =+..+ |
T Consensus 16 LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~-~g~~VflDlK~~DI-----~ 89 (255)
T 3qw3_A 16 LCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVP-AGIPVVLDAKRGDI-----A 89 (255)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHHHHHTTTHHHHHHHHHHHHHSC-TTCCBEEEEEECCC-----H
T ss_pred EEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEEcHHHHHhcCHHHHHHHHHHHHHhc-CCCeEEEEeecCCc-----H
Confidence 55557876532211 3568999999999999999998766666654 5666666553 66665542 12111 2
Q ss_pred chHHHHHHHH-HHcCCCEEEecC
Q 022982 101 SAFKEYVEDC-KQVGFDTIELNV 122 (289)
Q Consensus 101 ~~~~~yl~~~-k~lGF~~IEISd 122 (289)
+-+..|.+.+ +++|+|+|-|+-
T Consensus 90 nTv~~~a~~~~~~lg~d~vTvh~ 112 (255)
T 3qw3_A 90 DTADAYATSAFKHLNAHAITASP 112 (255)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcc
Confidence 3456677666 479999999964
No 463
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=50.93 E-value=31 Score=32.57 Aligned_cols=115 Identities=14% Similarity=0.205 Sum_probs=65.7
Q ss_pred HHHHHHHHHHh------CCceecCCcHHHHHHHhCCc---hHHHHHHHHHHcCCCEEEecCCccc---CChhHHHHHHHH
Q 022982 71 FIEEVVKRAHQ------HDVYVSTGDWAEHLIRNGPS---AFKEYVEDCKQVGFDTIELNVGSLE---IPEETLLRYVRL 138 (289)
Q Consensus 71 ~l~eKI~l~~~------~gV~v~~GtlfE~a~~qg~~---~~~~yl~~~k~lGF~~IEISdGti~---i~~~~r~~lI~~ 138 (289)
.+.|.|+-.++ -+|++++-+|++-+ .+.. .+.++.+.+.+.|.++|++|.|+.. .+. + ++.
T Consensus 229 ~~~eiv~aVr~avg~~~v~vRis~~~~~~~~--~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~----~-~~~ 301 (379)
T 3aty_A 229 LIYDVTKSVCDAVGSDRVGLRISPLNGVHGM--IDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD----V-VAW 301 (379)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGC--CCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC----H-HHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEECcccccccC--CCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH----H-HHH
Confidence 44555555544 34466664443321 1111 3455667777889999999998742 232 3 455
Q ss_pred HHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCcc
Q 022982 139 VKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLR 217 (289)
Q Consensus 139 ~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r 217 (289)
+++. +. .|=++. | . . + .+.+++.|++| ||.|++ +|++.. +
T Consensus 302 ir~~-~~-iPvi~~-------G--------~-----------i-t----~~~a~~~l~~g~aD~V~i-gR~~l~-----~ 342 (379)
T 3aty_A 302 VRGS-YS-GVKISN-------L--------R-----------Y-D----FEEADQQIREGKVDAVAF-GAKFIA-----N 342 (379)
T ss_dssp HHTT-CC-SCEEEE-------S--------S-----------C-C----HHHHHHHHHTTSCSEEEE-SHHHHH-----C
T ss_pred HHHH-CC-CcEEEE-------C--------C-----------C-C----HHHHHHHHHcCCCeEEEe-cHHHHh-----C
Confidence 5552 11 121222 1 1 1 1 46778888998 999988 676543 2
Q ss_pred HHHHHHHHhccCCC
Q 022982 218 ADIIAKVIGRLGLE 231 (289)
Q Consensus 218 ~d~v~~ii~~l~~e 231 (289)
.+++.++.+..++.
T Consensus 343 P~l~~k~~~g~~l~ 356 (379)
T 3aty_A 343 PDLVERAQQNWPLN 356 (379)
T ss_dssp TTHHHHHHHTCCCC
T ss_pred cHHHHHHHcCCCCC
Confidence 56788888766544
No 464
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=50.89 E-value=14 Score=31.98 Aligned_cols=88 Identities=14% Similarity=0.127 Sum_probs=31.1
Q ss_pred CCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHhC----Cce---------ecCCc
Q 022982 24 FGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH----DVY---------VSTGD 90 (289)
Q Consensus 24 ~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~----gV~---------v~~Gt 90 (289)
.++..+.+=|+ . .+..++.+++. | .|.+ ..||.++.+++.+++..+.+-.. ++. |++-+
T Consensus 78 ~~ipvi~~Ggi--~-~~~~~~~~l~~-G--ad~V--~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g 149 (247)
T 3tdn_A 78 TTLPIIASGGA--G-KMEHFLEAFLR-G--ADKV--SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYS 149 (247)
T ss_dssp CCSCEEEESCC--C-SHHHHHHHHHT-T--CSEE--CCSHHHHHCTHHHHHHHHHHC-----------------------
T ss_pred CCCCEEEeCCC--C-CHHHHHHHHHc-C--CCee--ehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECC
Confidence 35666666555 2 55677777754 4 5654 66788887777777666655211 221 22223
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 022982 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (289)
Q Consensus 91 lfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (289)
|.|.. . ....++.+.+.++|++.|=+++-
T Consensus 150 ~~~~~--~--~~~~~~a~~~~~~G~~~i~~t~~ 178 (247)
T 3tdn_A 150 GKKNT--G--ILLRDWVVEVEKRGAGEILLTSI 178 (247)
T ss_dssp ---------------------------------
T ss_pred CcccC--C--CCHHHHHHHHHhcCCCEEEEecc
Confidence 33321 0 13556778888999999887653
No 465
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=50.86 E-value=43 Score=29.66 Aligned_cols=76 Identities=12% Similarity=0.121 Sum_probs=47.2
Q ss_pred HHHHhhccc-ccEEEecCccccccC----hhHHHHHHHHHHhCCce---ecC--C-c----HH---HHHHHhCCchHHHH
Q 022982 45 DIFESMGQF-VDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVY---VST--G-D----WA---EHLIRNGPSAFKEY 106 (289)
Q Consensus 45 DlLe~ag~y-ID~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~---v~~--G-t----lf---E~a~~qg~~~~~~y 106 (289)
+.|+.+.+. .|++=+.......++ ...+++.-+++.++|+. ++. + . +. +....+.-+.+++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 114 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVGATRTFDPSSNYPEQRQEALEYLKSR 114 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 454444433 677777654332333 24688888999999998 663 1 1 11 11111111268899
Q ss_pred HHHHHHcCCCEEEec
Q 022982 107 VEDCKQVGFDTIELN 121 (289)
Q Consensus 107 l~~~k~lGF~~IEIS 121 (289)
++.|+++|.++| +.
T Consensus 115 i~~A~~lG~~~v-~~ 128 (335)
T 2qw5_A 115 VDITAALGGEIM-MG 128 (335)
T ss_dssp HHHHHHTTCSEE-EE
T ss_pred HHHHHHcCCCEE-ec
Confidence 999999999999 64
No 466
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=50.78 E-value=21 Score=32.49 Aligned_cols=52 Identities=15% Similarity=0.294 Sum_probs=42.1
Q ss_pred CchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHcCCccc-ce-eeeec
Q 022982 100 PSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK-PK-FAVMF 154 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~-~IEISdGti~i~~~~r~~lI~~~~~~G~~v~-~E-~g~k~ 154 (289)
|....+.+++|-+.|.. .|-++.|+ +.++..++.+.+++.|++++ |. +|+-+
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 135 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITEGI---PVHDTMRFVNYARQKGATIIGPNCPGAIT 135 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCC---CHHHHHHHHHHHHHHTCEEECSSSCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEEcCCCCeeEc
Confidence 56789999999999999 77788886 77778899999999999766 44 24443
No 467
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=50.76 E-value=17 Score=37.55 Aligned_cols=102 Identities=15% Similarity=0.165 Sum_probs=60.9
Q ss_pred HHHHHHHcCCCEEEec-----C-----Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCC--CCc-
Q 022982 106 YVEDCKQVGFDTIELN-----V-----GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI--PSD- 162 (289)
Q Consensus 106 yl~~~k~lGF~~IEIS-----d-----Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~ev--g~~- 162 (289)
-+.++++|||++|+++ . |.-. + +.++..++|+.+.++|++|+-.+-...-..+- +..
T Consensus 207 ~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g~~~ 286 (755)
T 3aml_A 207 VLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNG 286 (755)
T ss_dssp THHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSGGG
T ss_pred HHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeccccccccccchhc
Confidence 4778899999999997 1 1111 1 36899999999999999998877553211110 000
Q ss_pred cc---cccccccc------cCCCCcc-----ccccHHHHHHHHHHHHH-ccCcEEEEecc
Q 022982 163 RD---RAFGAYVA------RAPRSTE-----YVEDVDLLIRRAERCLE-AGADMIMIDSD 207 (289)
Q Consensus 163 ~d---~~~~~~~~------~~~~~~~-----~~~~~~~~I~~~~~dLe-AGA~~ViiEar 207 (289)
-| .....+.. ...|... ...-.+.+++.++..++ .|+|=.-+.+=
T Consensus 287 fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDGfR~Dav 346 (755)
T 3aml_A 287 YDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGV 346 (755)
T ss_dssp GCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTH
T ss_pred cccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCCCEEEecch
Confidence 00 00000100 0012111 11125778888999998 89999988874
No 468
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=50.74 E-value=14 Score=36.77 Aligned_cols=46 Identities=15% Similarity=0.034 Sum_probs=35.2
Q ss_pred HHHHHH-cCCCEEEecCCc--------cc-----C-----ChhHHHHHHHHHHHcC--C--cccceeee
Q 022982 107 VEDCKQ-VGFDTIELNVGS--------LE-----I-----PEETLLRYVRLVKSAG--L--KAKPKFAV 152 (289)
Q Consensus 107 l~~~k~-lGF~~IEISdGt--------i~-----i-----~~~~r~~lI~~~~~~G--~--~v~~E~g~ 152 (289)
|+++|+ |||++|+++==+ -. + +.++..++|+.+.++| + +|+-.+-.
T Consensus 197 LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~ 265 (637)
T 1ji1_A 197 LGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVF 265 (637)
T ss_dssp HHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECC
T ss_pred HHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECc
Confidence 567899 999999997311 11 1 3689999999999999 9 88766644
No 469
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=50.66 E-value=10 Score=38.04 Aligned_cols=48 Identities=15% Similarity=0.172 Sum_probs=36.4
Q ss_pred HHHHHH--HHHHcCCCEEEecCCc------------------------ccC-----ChhHHHHHHHHHHHcCCccccee
Q 022982 103 FKEYVE--DCKQVGFDTIELNVGS------------------------LEI-----PEETLLRYVRLVKSAGLKAKPKF 150 (289)
Q Consensus 103 ~~~yl~--~~k~lGF~~IEISdGt------------------------i~i-----~~~~r~~lI~~~~~~G~~v~~E~ 150 (289)
+.+-|+ ++++|||++|.+|==+ -.+ +.++..+||+.+.++|++|+-.+
T Consensus 54 i~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~ 132 (680)
T 1cyg_A 54 IINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDF 132 (680)
T ss_dssp HHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 334467 7789999999998311 111 36899999999999999988766
No 470
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=50.64 E-value=41 Score=31.02 Aligned_cols=134 Identities=18% Similarity=0.219 Sum_probs=81.6
Q ss_pred HHcCCCEEEecCCc-----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcc
Q 022982 111 KQVGFDTIELNVGS-----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTE 179 (289)
Q Consensus 111 k~lGF~~IEISdGt-----------i~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~ 179 (289)
.+.||++|=+|+.+ ..++-++....++.+.+. -. +| +-+ |-.+| +
T Consensus 39 e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~-~~-~P-via-----------D~d~G-------y--- 94 (298)
T 3eoo_A 39 EAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNA-TN-LP-LLV-----------DIDTG-------W--- 94 (298)
T ss_dssp HHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHH-CC-SC-EEE-----------ECTTC-------S---
T ss_pred HHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhh-cC-Ce-EEE-----------ECCCC-------C---
Confidence 45699999999822 346788888888888763 11 12 222 11111 1
Q ss_pred ccccHHHHHHHHHHHHHccCcEEEEecc------c------cccCC---------------CCc----cHH-----HHHH
Q 022982 180 YVEDVDLLIRRAERCLEAGADMIMIDSD------D------VCKHA---------------DSL----RAD-----IIAK 223 (289)
Q Consensus 180 ~~~~~~~~I~~~~~dLeAGA~~ViiEar------G------I~d~~---------------G~~----r~d-----~v~~ 223 (289)
-++....+.+++..++||.-|-||.. | +++.+ ..+ |+| -+++
T Consensus 95 --g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~glde 172 (298)
T 3eoo_A 95 --GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDA 172 (298)
T ss_dssp --SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHH
Confidence 14788899999999999999999984 1 11110 111 222 1222
Q ss_pred HH------hccCCCceEEecCC-chhHHHHHHHhCCCcccc-c--CCCCchhhhhhh
Q 022982 224 VI------GRLGLEKTMFEATN-PRTSEWFIRRYGPKVNLF-V--DHSQVMDLECLR 270 (289)
Q Consensus 224 ii------~~l~~eklifEAP~-k~qQ~~~I~~fG~~VNLg-I--~~~eVl~LE~LR 270 (289)
.| ...|.+-|..|++. +++-..|.+.+.--|+.. + ..+..+..+.|.
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~ 229 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELK 229 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHH
T ss_pred HHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHH
Confidence 22 34578999999985 777788889997666333 2 223345555554
No 471
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=50.53 E-value=11 Score=36.44 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=41.1
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcc---------cCCh---hHHHHHHHHHHHcCCcccceeee
Q 022982 98 NGPSAFKEYVEDCKQVGFDTIELNVGSL---------EIPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti---------~i~~---~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
.+|...++.++.++++||++|-|+-+-- .+++ +...++|+.++++|++|+-.++-
T Consensus 42 ~~~~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~ 108 (515)
T 3icg_A 42 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHH 108 (515)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CCCcCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3455678999999999999999964421 2232 44567899999999999877654
No 472
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=50.30 E-value=63 Score=29.71 Aligned_cols=100 Identities=16% Similarity=0.122 Sum_probs=68.9
Q ss_pred HHHHHHhhcccccEEEecCccccccChhHHHHHHHHHHh----CCceecCCc----HHHHHHH--hCC------------
Q 022982 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVSTGD----WAEHLIR--NGP------------ 100 (289)
Q Consensus 43 ~~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~----~gV~v~~Gt----lfE~a~~--qg~------------ 100 (289)
.+.+++.-+++||+ |.|...+..++.+++.+.+.+. .+++++--| -+|.|+. +|.
T Consensus 43 A~~~v~~GAdiIDI---g~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~d 119 (300)
T 3k13_A 43 ARQQVEDGALVIDV---NMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGE 119 (300)
T ss_dssp HHHHHHTTCSEEEE---ECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTCH
T ss_pred HHHHHHCCCCEEEE---CCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccCC
Confidence 34455566666665 8888888888889999998873 589998765 4899998 663
Q ss_pred chHHHHHHHHHHcCCCEEEecC--CcccCChhHHHH----HHHHH-HHcCCc
Q 022982 101 SAFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLR----YVRLV-KSAGLK 145 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~----lI~~~-~~~G~~ 145 (289)
.++++.+..|+++|..+|=... .-+.-+.++|.+ +.+.+ .+.|+.
T Consensus 120 ~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~ 171 (300)
T 3k13_A 120 EVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFN 171 (300)
T ss_dssp HHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 1466899999999998887652 112333444443 34443 677874
No 473
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=50.29 E-value=15 Score=34.35 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=37.7
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 229 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~ 229 (289)
||+++++.+.++.+|||..|=+=.|.=-+....++.+...++++++-
T Consensus 46 TpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR 92 (316)
T 3c6c_A 46 TPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVR 92 (316)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHH
Confidence 69999999999999999999999995433445667777777775543
No 474
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=50.27 E-value=19 Score=36.91 Aligned_cols=52 Identities=19% Similarity=0.278 Sum_probs=41.7
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCCh-hHHHHHHHHHHHcCCcccceee
Q 022982 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEI---------SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~g 151 (289)
|+..++-++.+|++||++|++ ..|..+.+- .+..++|+.|+++|+.|+-..|
T Consensus 39 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~G 100 (654)
T 3thd_A 39 RFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 100 (654)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccC
Confidence 457888999999999999988 556666553 3467899999999999986653
No 475
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=50.21 E-value=1.1e+02 Score=25.59 Aligned_cols=165 Identities=12% Similarity=0.133 Sum_probs=90.4
Q ss_pred CCCceeEecCCCCCCCchhHHHHHHHhhcccccEEEecCccccccChh--HHHHHHHHHHhC--------CceecCC--c
Q 022982 23 RFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKP--FIEEVVKRAHQH--------DVYVSTG--D 90 (289)
Q Consensus 23 ~~GlT~V~DkGl~~~~g~~~~~DlLe~ag~yID~lKfg~GTs~l~p~~--~l~eKI~l~~~~--------gV~v~~G--t 90 (289)
..|++.++.++. .+...+.+++.+..|=+ +..+.|.......+ .+++.-+++.+. |+..++. +
T Consensus 31 ~~Gv~~~v~~~~----~~~~~~~~~~~~~~~p~-~~~~~g~hP~~~~~~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~ 105 (265)
T 1yix_A 31 ARDVKFCLAVAT----TLPSYLHMRDLVGERDN-VVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPET 105 (265)
T ss_dssp HTTEEEEEECCS----SHHHHHHHHHHHCSCTT-EEEEECCCTTCCSSCCCHHHHHHHHTSTTEEEEEEEEEECTTCSSC
T ss_pred HCCCCEEEEeCC----CHHHHHHHHHHHHHCCC-eEEEEEeCCCcccccchHHHHHHHhccCCeEEEEccccCCCcCCCC
Confidence 469988888775 56677888888888766 55555655433321 244444444322 3333321 2
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 022982 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (289)
Q Consensus 91 lfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~ 170 (289)
..+... .+.+.++.|+++|...+==+.. +.+ ++++.+++.|+.... .+-...+
T Consensus 106 ---~~~q~~--~~~~~~~~a~~~~~pv~iH~~~----~~~---~~~~~l~~~~~p~~~--~v~H~~~------------- 158 (265)
T 1yix_A 106 ---KVRQQE--SFIHHIQIGRELNKPVIVHTRD----ARA---DTLAILREEKVTDCG--GVLHCFT------------- 158 (265)
T ss_dssp ---HHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHHHTTGGGTC--EEETTCC-------------
T ss_pred ---hHHHHH--HHHHHHHHHHHhCCCEEEEecC----chH---HHHHHHHhcCCCCCC--EEEEcCC-------------
Confidence 122333 7889999999999886622221 233 445555554432110 1101000
Q ss_pred cccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 171 VARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
.| .+.++..++.|++.-+ .|.+... +...+.++++.+|.+|||||..-|
T Consensus 159 ----~~-----------~~~~~~~~~~g~~~~~---sg~~~~~---~~~~~~~~~~~~~~drll~~TD~P 207 (265)
T 1yix_A 159 ----ED-----------RETAGKLLDLGFYISF---SGIVTFR---NAEQLRDAARYVPLDRLLVETDSP 207 (265)
T ss_dssp ----SC-----------HHHHHHHHTTTCEEEE---CGGGGST---TCHHHHHHHHHSCGGGEEECCCBT
T ss_pred ----CC-----------HHHHHHHHHCCcEEEE---CCccccC---chHHHHHHHHhCChHHEEEecCCC
Confidence 01 3455566667765433 2332211 124567888899999999998755
No 476
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=50.20 E-value=18 Score=35.55 Aligned_cols=130 Identities=15% Similarity=0.213 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCCEEEecC----------CcccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 022982 105 EYVEDCKQVGFDTIELNV----------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (289)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d 164 (289)
+-+.+++++||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-...-..+ +.- -
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~-~~~-~ 200 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPE-GNY-M 200 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSS-SCC-G
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCC-CCc-c
Confidence 346788999999999862 11111 1478899999999999999988755321111 000 0
Q ss_pred cccccccc---cCCCCccc-------cccHHHHHHHHHHHH-HccCcEEEEecc-ccccCCC-CccHHHHHHHHhccCCC
Q 022982 165 RAFGAYVA---RAPRSTEY-------VEDVDLLIRRAERCL-EAGADMIMIDSD-DVCKHAD-SLRADIIAKVIGRLGLE 231 (289)
Q Consensus 165 ~~~~~~~~---~~~~~~~~-------~~~~~~~I~~~~~dL-eAGA~~ViiEar-GI~d~~G-~~r~d~v~~ii~~l~~e 231 (289)
..+..+.. ...|.... ..-.+.+++.++..+ +.|+|=.-+.+= .+.+... .+-.++.+ .+.... -
T Consensus 201 ~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~-~~~~~~-~ 278 (558)
T 3vgf_A 201 VKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIAD-VVHKYN-R 278 (558)
T ss_dssp GGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHHH-HHHHTT-C
T ss_pred cccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecccccccccHHHHHHHHHH-HHhhcC-E
Confidence 00000000 00121100 011467888888888 689999999985 5655432 22222222 233333 5
Q ss_pred ceEEecC
Q 022982 232 KTMFEAT 238 (289)
Q Consensus 232 klifEAP 238 (289)
-+|=|+.
T Consensus 279 ~~iaE~~ 285 (558)
T 3vgf_A 279 IVIAESD 285 (558)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 5667774
No 477
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=50.19 E-value=1.3e+02 Score=27.53 Aligned_cols=81 Identities=7% Similarity=0.100 Sum_probs=55.1
Q ss_pred cChhHHHHHHHHHHhCCceecC--C--cHHH----HHHHhCC----------------chHHHHHHHHHHcCCCEEEecC
Q 022982 67 MPKPFIEEVVKRAHQHDVYVST--G--DWAE----HLIRNGP----------------SAFKEYVEDCKQVGFDTIELNV 122 (289)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV~v~~--G--tlfE----~a~~qg~----------------~~~~~yl~~~k~lGF~~IEISd 122 (289)
.+.+.+++.+++++++|.++.. - .+.+ .+..+|. ..+++.++.+++.|... -+.
T Consensus 166 ~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~-~i~- 243 (448)
T 3hm7_A 166 SHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPI-HIC- 243 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCE-EEC-
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCE-EEE-
Confidence 3677899999999999987764 2 2322 1111111 14677788888888764 332
Q ss_pred CcccCChhHHHHHHHHHHHcCCcccceeee
Q 022982 123 GSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-++..+-.++|+.+++.|+.|..|+..
T Consensus 244 ---H~s~~~~~~~i~~ak~~G~~v~~e~~p 270 (448)
T 3hm7_A 244 ---HVSSRKVLKRIKQAKGEGVNVSVETCP 270 (448)
T ss_dssp ---CCCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred ---eCCCHHHHHHHHHHHhcCCCEEEEech
Confidence 334567779999999999998887754
No 478
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=50.15 E-value=30 Score=31.25 Aligned_cols=64 Identities=8% Similarity=0.228 Sum_probs=39.6
Q ss_pred HHHHHHHhCCceecC--CcH---------HHHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHH
Q 022982 74 EVVKRAHQHDVYVST--GDW---------AEHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRL 138 (289)
Q Consensus 74 eKI~l~~~~gV~v~~--Gtl---------fE~a~~qg~~----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~ 138 (289)
+-++.+|+.|++|.+ |+| |..++ .++. -++.-++.|++.|||.|.|.=-.. +++++..++..
T Consensus 57 ~~~~~~~~~~~kv~lsigg~~~~~~~~~~~~~~~-~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p--~~~d~~~~~~l 133 (319)
T 3cz8_A 57 AAIETTWQRRVTPLATITNLTSGGFSTEIVHQVL-NNPTARTNLVNNIYDLVSTRGYGGVTIDFEQV--SAADRDLFTGF 133 (319)
T ss_dssp HHHHHHHHTTCEEEEEEECEETTEECHHHHHHHH-TCHHHHHHHHHHHHHHHHHHTCSEEEEECCSC--CGGGHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEecCCCCCcCHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCCCeEEEeccCC--CHHHHHHHHHH
Confidence 456778999998765 543 22222 2222 356777889999999999975443 24555444444
Q ss_pred HH
Q 022982 139 VK 140 (289)
Q Consensus 139 ~~ 140 (289)
++
T Consensus 134 l~ 135 (319)
T 3cz8_A 134 LR 135 (319)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 479
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=50.14 E-value=31 Score=30.11 Aligned_cols=53 Identities=17% Similarity=-0.009 Sum_probs=24.8
Q ss_pred HHHHHHhccCCCceEEecCCchhHHHHHHHhCCCccc---ccCCCCchhhhhhhccc
Q 022982 220 IIAKVIGRLGLEKTMFEATNPRTSEWFIRRYGPKVNL---FVDHSQVMDLECLRGRN 273 (289)
Q Consensus 220 ~v~~ii~~l~~eklifEAP~k~qQ~~~I~~fG~~VNL---gI~~~eVl~LE~LR~g~ 273 (289)
.+.++..+.|.+=++.-|..++.-..+-+.+|++.-+ ||.+.---+ |+++.|.
T Consensus 141 ~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGa 196 (228)
T 3m47_A 141 EIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDP-GETLRFA 196 (228)
T ss_dssp HHHHHHHHTTCCEEECCSSCHHHHHHHHHHHCSSSEEEECC----------CGGGTC
T ss_pred HHHHHHHHhCCcEEEECCCChHHHHHHHHhcCCCCEEEecCcCcCCCCH-hHHHcCC
Confidence 3445556778777776664333333444557765554 355541112 6666553
No 480
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=49.94 E-value=8.4 Score=33.81 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=50.2
Q ss_pred HHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022982 78 RAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (289)
Q Consensus 78 l~~~~gV-~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (289)
+++++|| .+.- |--.++|+.+- .. .+.++||+.+=++|.+-+.+.+.....++.++..|-.|.+
T Consensus 151 ~L~~~gi~~lvv~G~~T~~CV~~T--a~-----dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~ 216 (227)
T 3r2j_A 151 LLHSIGARRVFVCGVAYDFCVFFT--AM-----DARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLK 216 (227)
T ss_dssp HHHHHTCCEEEEEESCTTTHHHHH--HH-----HHHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEEC
T ss_pred HHHHcCCCEEEEEEeccchHHHHH--HH-----HHHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3455688 4444 77888888885 33 3567999999999999999999999999999998766544
No 481
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=49.88 E-value=44 Score=30.86 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=69.6
Q ss_pred hHHHHHHHhhcccccEE-EecC---ccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022982 41 NVLEDIFESMGQFVDGL-KFSG---GSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (289)
Q Consensus 41 ~~~~DlLe~ag~yID~l-Kfg~---GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (289)
.+.++.++.-++=||++ -+|+ |..-.+- +.|++-.+.|+...++|-. |.++.. .+.+..-.+.|.+.|.|
T Consensus 130 ~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~-~eI~~V~~a~~~~~lKVIl----Et~~Lt-~eei~~A~~ia~eaGAD 203 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMNYPWLSEKRYTDVF-QDIRAVRLAAKDAILKVIL----ETSQLT-ADEIIAGCVLSSLAGAD 203 (288)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHH-HHHHHHHHHTTTSEEEEEC----CGGGCC-HHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEEeehhhhcCCcHHHHH-HHHHHHHHHhcCCCceEEE----ECCCCC-HHHHHHHHHHHHHcCCC
Confidence 36677778778888865 3333 2222111 1244555555544344443 222111 12445566778899999
Q ss_pred EEEecCCccc--CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHH
Q 022982 117 TIELNVGSLE--IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAER 193 (289)
Q Consensus 117 ~IEISdGti~--i~~~~r~~lI~~~~~~-G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~ 193 (289)
.|--|.|+.. -+.++ .++++.+.+. | ..+++|-.+. ++| .+++..
T Consensus 204 fVKTSTGf~~~GAT~ed-v~lmr~~v~~~g----~~v~VKAAGG-----------------------Irt----~edAl~ 251 (288)
T 3oa3_A 204 YVKTSTGFNGPGASIEN-VSLMSAVCDSLQ----SETRVKASGG-----------------------IRT----IEDCVK 251 (288)
T ss_dssp EEECCCSSSSCCCCHHH-HHHHHHHHHHSS----SCCEEEEESS-----------------------CCS----HHHHHH
T ss_pred EEEcCCCCCCCCCCHHH-HHHHHHHHHHhC----CCceEEEeCC-----------------------CCC----HHHHHH
Confidence 9999998762 23334 3566666531 2 2466654211 112 367777
Q ss_pred HHHccCcEEEE
Q 022982 194 CLEAGADMIMI 204 (289)
Q Consensus 194 dLeAGA~~Vii 204 (289)
.++|||+.|=+
T Consensus 252 mi~aGA~RiGt 262 (288)
T 3oa3_A 252 MVRAGAERLGA 262 (288)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCceeeh
Confidence 88899997643
No 482
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=49.85 E-value=30 Score=32.58 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=53.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChh-HHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCcccc
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLEIPEE-TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYV 181 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~-~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~ 181 (289)
..++.+.+.+.|.++|+||.|+..-... .-.++++.+++. +. .|=++. | . +
T Consensus 257 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~-~~-iPvi~~-------G--------g-----------i 308 (377)
T 2r14_A 257 AFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQR-FK-GGLIYC-------G--------N-----------Y 308 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHH-CC-SEEEEE-------S--------S-----------C
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHH-CC-CCEEEE-------C--------C-----------C
Confidence 4456677778899999999987421110 013456666653 11 121111 1 0 1
Q ss_pred ccHHHHHHHHHHHHHcc-CcEEEEeccccccCCCCccHHHHHHHHhccCCC
Q 022982 182 EDVDLLIRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 231 (289)
Q Consensus 182 ~~~~~~I~~~~~dLeAG-A~~ViiEarGI~d~~G~~r~d~v~~ii~~l~~e 231 (289)
+ .+.+++.|++| ||.|++ +|+++.+ .+++.++.+..++.
T Consensus 309 -~----~~~a~~~l~~g~aD~V~i-gR~~l~~-----P~l~~k~~~g~~l~ 348 (377)
T 2r14_A 309 -D----AGRAQARLDDNTADAVAF-GRPFIAN-----PDLPERFRLGAALN 348 (377)
T ss_dssp -C----HHHHHHHHHTTSCSEEEE-SHHHHHC-----TTHHHHHHHTCCCC
T ss_pred -C----HHHHHHHHHCCCceEEee-cHHHHhC-----chHHHHHHcCCCCC
Confidence 1 57788889998 999988 6765532 56788887765543
No 483
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=49.72 E-value=34 Score=31.29 Aligned_cols=140 Identities=15% Similarity=0.205 Sum_probs=79.0
Q ss_pred cChhHHHHHHHHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 022982 67 MPKPFIEEVVKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (289)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV-~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (289)
++.+.+.+.++.+.++|+ .++. |++-|--. ...+.+.+.++.+++.|+.. -+++|++ +.+ .++.+++.|+
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~-~~~~~l~~ll~~ik~~g~~i-~~t~G~l--~~e----~l~~L~~aGv 170 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHE-RDMPYLEQMVQGVKAMGLEA-CMTLGTL--SES----QAQRLANAGL 170 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT-TTHHHHHHHHHHHHHTTSEE-EEECSSC--CHH----HHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc-CCHHHHHHHHHHHHHcCCeE-EEecCCC--CHH----HHHHHHHCCC
Confidence 556667778888888887 4454 33311100 11236888889999998864 4888874 433 4556677777
Q ss_pred cccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHH-
Q 022982 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAK- 223 (289)
Q Consensus 145 ~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~- 223 (289)
.-.+ ++++. . +..+.. +.+ ..+.+++++.++...++|- . +....|+.- |+-.++..+.
T Consensus 171 d~v~-i~les-~-------~e~~~~-i~~-------~~~~~~~l~~i~~a~~~Gi-~--v~~~~I~Gl-~et~ed~~~~l 229 (369)
T 1r30_A 171 DYYN-HNLDT-S-------PEFYGN-IIT-------TRTYQERLDTLEKVRDAGI-K--VCSGGIVGL-GETVKDRAGLL 229 (369)
T ss_dssp CEEE-CCCBS-C-------HHHHHH-HCC-------SSCHHHHHHHHHHHHHHHC-E--EECCEEECS-SCCHHHHHHHH
T ss_pred CEEe-ecCcC-C-------HHHHHH-hCC-------CCCHHHHHHHHHHHHHcCC-e--eeeeeEeeC-CCCHHHHHHHH
Confidence 6332 34422 1 111101 110 1258999999999999997 3 345545544 4434443322
Q ss_pred -HHhccC--CCceEE
Q 022982 224 -VIGRLG--LEKTMF 235 (289)
Q Consensus 224 -ii~~l~--~eklif 235 (289)
.+..++ ++.+-|
T Consensus 230 ~~l~~l~~~~~~i~~ 244 (369)
T 1r30_A 230 LQLANLPTPPESVPI 244 (369)
T ss_dssp HHHHSSSSCCSEEEE
T ss_pred HHHHhhcCCCCEEEe
Confidence 234565 555443
No 484
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=49.64 E-value=15 Score=36.92 Aligned_cols=48 Identities=8% Similarity=0.068 Sum_probs=36.4
Q ss_pred HHHHHH--HHHHcCCCEEEecCCcc--------------------------cC-----ChhHHHHHHHHHHHcCCcccce
Q 022982 103 FKEYVE--DCKQVGFDTIELNVGSL--------------------------EI-----PEETLLRYVRLVKSAGLKAKPK 149 (289)
Q Consensus 103 ~~~yl~--~~k~lGF~~IEISdGti--------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E 149 (289)
+.+-|+ ++++|||++|.+|==+- .+ +.++..+||+.+.++|++|+-.
T Consensus 57 i~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD 136 (683)
T 3bmv_A 57 IINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIID 136 (683)
T ss_dssp HHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 334467 77999999999984111 11 2688999999999999998876
Q ss_pred e
Q 022982 150 F 150 (289)
Q Consensus 150 ~ 150 (289)
+
T Consensus 137 ~ 137 (683)
T 3bmv_A 137 F 137 (683)
T ss_dssp E
T ss_pred E
Confidence 6
No 485
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=49.57 E-value=16 Score=39.68 Aligned_cols=50 Identities=8% Similarity=0.145 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc----------------------C---------ChhHHHHHHHHHHHcCCcccceee
Q 022982 103 FKEYVEDCKQVGFDTIELNVGSLE----------------------I---------PEETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~----------------------i---------~~~~r~~lI~~~~~~G~~v~~E~g 151 (289)
+.+=+.++|+||+++||++=-+-. + +.++..++|+.+.++|++|+-.+-
T Consensus 855 I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 855 IAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 334477889999999998732221 1 346899999999999999988775
Q ss_pred e
Q 022982 152 V 152 (289)
Q Consensus 152 ~ 152 (289)
.
T Consensus 935 ~ 935 (1108)
T 3ttq_A 935 D 935 (1108)
T ss_dssp C
T ss_pred c
Confidence 5
No 486
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=49.44 E-value=96 Score=27.19 Aligned_cols=80 Identities=14% Similarity=0.281 Sum_probs=53.2
Q ss_pred cEEEec-CccccccChhHHHHHHHHHHhCCceec--C-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----
Q 022982 55 DGLKFS-GGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE---- 126 (289)
Q Consensus 55 D~lKfg-~GTs~l~p~~~l~eKI~l~~~~gV~v~--~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~---- 126 (289)
+.+-|. +|--.++| .+.+.++.++++|+.+. | |++- +.++++|.+.|-||=-+.+
T Consensus 129 ~~i~~s~gGEPll~~--~l~~li~~~~~~g~~~~l~TNG~~~---------------~~l~~L~~~~v~isld~~~~~~~ 191 (311)
T 2z2u_A 129 KHVAISLSGEPTLYP--YLDELIKIFHKNGFTTFVVSNGILT---------------DVIEKIEPTQLYISLDAYDLDSY 191 (311)
T ss_dssp CEEEECSSSCGGGST--THHHHHHHHHHTTCEEEEEECSCCH---------------HHHHHCCCSEEEEECCCSSTTTC
T ss_pred CEEEEeCCcCccchh--hHHHHHHHHHHCCCcEEEECCCCCH---------------HHHHhCCCCEEEEEeecCCHHHH
Confidence 456786 67777766 59999999999998543 4 5541 1234558899999855531
Q ss_pred --------CChhHHHHHHHHHHHcCCcccceeee
Q 022982 127 --------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 127 --------i~~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
-+.+.-.+.|+.+++.| .+.-.+.+
T Consensus 192 ~~i~~~~~~~~~~v~~~i~~l~~~g-~v~i~~~~ 224 (311)
T 2z2u_A 192 RRICGGKKEYWESILNTLDILKEKK-RTCIRTTL 224 (311)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTSS-SEEEEEEE
T ss_pred HHHhCCccchHHHHHHHHHHHHhcC-CEEEEEEE
Confidence 13556677788888887 55444433
No 487
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=49.38 E-value=26 Score=32.52 Aligned_cols=16 Identities=19% Similarity=0.189 Sum_probs=7.8
Q ss_pred hHHHHHHHHHHcCCCE
Q 022982 102 AFKEYVEDCKQVGFDT 117 (289)
Q Consensus 102 ~~~~yl~~~k~lGF~~ 117 (289)
.++++++.|++.|+-+
T Consensus 88 ~ld~~v~~a~~~GiyV 103 (345)
T 3jug_A 88 TVREVIELAEQNKMVA 103 (345)
T ss_dssp HHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHCCCEE
Confidence 3445555555555443
No 488
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=49.38 E-value=40 Score=29.57 Aligned_cols=37 Identities=30% Similarity=0.327 Sum_probs=26.5
Q ss_pred chHHHHHHHHHHcCCCE--EEecCCc----ccCChhHHHHHHHHHHHc
Q 022982 101 SAFKEYVEDCKQVGFDT--IELNVGS----LEIPEETLLRYVRLVKSA 142 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~--IEISdGt----i~i~~~~r~~lI~~~~~~ 142 (289)
..+.+-++.+ +.|.|+ |-|-||. +++.. ..|+.+++.
T Consensus 13 ~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~----~~v~~lr~~ 55 (231)
T 3ctl_A 13 LKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSP----FFVSQVKKL 55 (231)
T ss_dssp GGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCH----HHHHHHHTT
T ss_pred hhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcH----HHHHHHHhc
Confidence 3678888889 899997 5666998 45544 467777763
No 489
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=49.21 E-value=32 Score=29.83 Aligned_cols=125 Identities=17% Similarity=0.156 Sum_probs=73.8
Q ss_pred HHHHHHHhhcc-------cccEEEecCccccccChhHHHHHHHHHHhCCce--ecC---C-cHHHHHHHhCCc-------
Q 022982 42 VLEDIFESMGQ-------FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVY--VST---G-DWAEHLIRNGPS------- 101 (289)
Q Consensus 42 ~~~DlLe~ag~-------yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~--v~~---G-tlfE~a~~qg~~------- 101 (289)
.|+++|+.+.+ +|| +|-.... -......+.-+++.++++.. +.. - ..++.+-...|+
T Consensus 94 tL~evl~~~~~~~~~~~l~iE-iK~~~~~--~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~ 170 (258)
T 2o55_A 94 SLEELFVAIEEQKFNLKLNLE-LKGEEWK--RKESGDHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPDVKITYLF 170 (258)
T ss_dssp BHHHHHHHHHHSCSCCEEEEE-ECCSSSS--STTSSHHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEEEEC
T ss_pred CHHHHHHHhhhhcCceEEEEE-EccCCcc--ccchHHHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEE
Confidence 78888887654 344 3532210 11234567778888888752 222 2 234444333331
Q ss_pred ------hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCC
Q 022982 102 ------AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (289)
Q Consensus 102 ------~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~ 175 (289)
...+|+..++.+|.+.|-++-..++ .++|+.++++|++|.+ .++.. -.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~v~~~~~~G~~v~~-wTv~~-------~~n----------- 225 (258)
T 2o55_A 171 NYMGQPTPLDFVEQACYGDANGVSMLFHYLT------KEQVCTAHEKGLSVTV-WMPWI-------FDD----------- 225 (258)
T ss_dssp CTTSCCCCTTHHHHHHHTTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE-ECCTT-------CCC-----------
T ss_pred eCCCCCCHHHHHHHHHhcCCeEEecChhhcC------HHHHHHHHHCCCEEEE-eeCCC-------CCC-----------
Confidence 1123556689999999877654432 4689999999998765 33300 001
Q ss_pred CCccccccHHHHHHHHHHHHHccCcEEEEe
Q 022982 176 RSTEYVEDVDLLIRRAERCLEAGADMIMID 205 (289)
Q Consensus 176 ~~~~~~~~~~~~I~~~~~dLeAGA~~ViiE 205 (289)
+ .+.+++.++.|++.||..
T Consensus 226 -------~----~~~~~~l~~~GvdgI~TD 244 (258)
T 2o55_A 226 -------S----EEDWKKCLELQVDLICSN 244 (258)
T ss_dssp -------C----HHHHHHHHHHTCSEEEES
T ss_pred -------C----HHHHHHHHHcCCCEEEeC
Confidence 1 255677789999999875
No 490
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=49.16 E-value=1.5e+02 Score=26.67 Aligned_cols=52 Identities=10% Similarity=-0.044 Sum_probs=34.4
Q ss_pred HHHHHHHHHccCcEEEEecccc--cc-------------CCCCccHHHHHHHHhccCCCceEEecCCc
Q 022982 188 IRRAERCLEAGADMIMIDSDDV--CK-------------HADSLRADIIAKVIGRLGLEKTMFEATNP 240 (289)
Q Consensus 188 I~~~~~dLeAGA~~ViiEarGI--~d-------------~~G~~r~d~v~~ii~~l~~eklifEAP~k 240 (289)
.+++++.++.|.+.-+- .=|+ |. ....-+.+.+.++++..++++|+.|..-+
T Consensus 203 ~e~a~~~~~~G~~i~~~-~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p 269 (330)
T 2ob3_A 203 LSYLTALAARGYLIGLD-HIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWT 269 (330)
T ss_dssp HHHHHHHHHTTCEEEEC-CTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred HHHHHHHHhCCCEEEeC-CCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 37888899999765443 1122 20 01113456688899999999999998655
No 491
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=49.16 E-value=19 Score=36.66 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=66.5
Q ss_pred HHHHHHHcCCCEEEecC-------------------CcccC---------C--------hhHHHHHHHHHHHcCCcccce
Q 022982 106 YVEDCKQVGFDTIELNV-------------------GSLEI---------P--------EETLLRYVRLVKSAGLKAKPK 149 (289)
Q Consensus 106 yl~~~k~lGF~~IEISd-------------------Gti~i---------~--------~~~r~~lI~~~~~~G~~v~~E 149 (289)
-+.++|+|||++|+++= |.-.. . .++..++|+.+.++|++|+-.
T Consensus 207 ~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilD 286 (718)
T 2vr5_A 207 MISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIID 286 (718)
T ss_dssp HHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEE
Confidence 37788999999999871 32211 1 489999999999999999887
Q ss_pred eeeecCCCCCCCc--------cc-ccc--------ccccccC----CCCccccccHHHHHHHHHHHHH-ccCcEEEEecc
Q 022982 150 FAVMFNKSDIPSD--------RD-RAF--------GAYVARA----PRSTEYVEDVDLLIRRAERCLE-AGADMIMIDSD 207 (289)
Q Consensus 150 ~g~k~~~~evg~~--------~d-~~~--------~~~~~~~----~~~~~~~~~~~~~I~~~~~dLe-AGA~~ViiEar 207 (289)
+-...- ++-... .| +.+ ..+..-. ....+...-.+.+++.++..++ .|+|=.-+.+=
T Consensus 287 vV~NH~-~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~ 365 (718)
T 2vr5_A 287 VVYNHT-AEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLA 365 (718)
T ss_dssp ECCSCC-SSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTG
T ss_pred eccCcc-cCccccCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcch
Confidence 754321 110000 00 000 0000000 0001111124677888888887 89999988886
Q ss_pred c-cccCCCCcc--HHHHHHHH
Q 022982 208 D-VCKHADSLR--ADIIAKVI 225 (289)
Q Consensus 208 G-I~d~~G~~r--~d~v~~ii 225 (289)
. +.+..+.+. ...+.+|-
T Consensus 366 ~~l~~~~~~~~~~~~~~~~i~ 386 (718)
T 2vr5_A 366 AALARELYSVNMLNTFFIALQ 386 (718)
T ss_dssp GGGGBSSSSBCTTCHHHHHHH
T ss_pred hhhhhccCCccchHHHHHHHH
Confidence 4 333333332 34555553
No 492
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=49.13 E-value=17 Score=32.98 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=41.7
Q ss_pred CchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHcCCccc-ce-eeeec
Q 022982 100 PSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK-PK-FAVMF 154 (289)
Q Consensus 100 ~~~~~~yl~~~k~lGF~-~IEISdGti~i~~~~r~~lI~~~~~~G~~v~-~E-~g~k~ 154 (289)
|....+.+++|-+.|.. .|.++.|+ +.++..++.+.+++.|++++ |. +|+-+
T Consensus 80 ~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~viGPNc~Gii~ 134 (294)
T 2yv1_A 80 APFAKDAVFEAIDAGIELIVVITEHI---PVHDTMEFVNYAEDVGVKIIGPNTPGIAS 134 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCC---CHHHHHHHHHHHHHHTCEEECSSCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEEcCCCceeec
Confidence 35688999999999999 78888886 67778899999999999766 44 24443
No 493
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=48.96 E-value=22 Score=33.67 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=39.6
Q ss_pred chHHHHHHHHHHcCCCEEEec---CC----------------cccCC---------hhHHHHHHHHHHHcCCcccceeee
Q 022982 101 SAFKEYVEDCKQVGFDTIELN---VG----------------SLEIP---------EETLLRYVRLVKSAGLKAKPKFAV 152 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEIS---dG----------------ti~i~---------~~~r~~lI~~~~~~G~~v~~E~g~ 152 (289)
..+++.++.++++|+++|.+- || ..+++ .+..-++|+.|+++|++|+--+.-
T Consensus 43 ~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~ 122 (383)
T 3pzg_A 43 RMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVN 122 (383)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCB
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 468999999999999999873 32 22211 445568999999999999887753
No 494
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=48.91 E-value=16 Score=33.59 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=36.1
Q ss_pred ChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 022982 68 PKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (289)
Q Consensus 68 p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (289)
..+.|++.|+.+|++||.|+. |. + --.+-++.++++|.++||+-.|
T Consensus 109 ~~~~L~~~i~~L~~~GIrVSL--FI------D--pd~~qi~aA~~~GAd~IELhTG 154 (260)
T 3o6c_A 109 NHAKLKQSIEKLQNANIEVSL--FI------N--PSLEDIEKSKILKAQFIELHTG 154 (260)
T ss_dssp TCTTHHHHHHHHHHTTCEEEE--EE------C--SCHHHHHHHHHTTCSEEEECCH
T ss_pred CHHHHHHHHHHHHHCCCEEEE--Ee------C--CCHHHHHHHHHhCCCEEEEech
Confidence 566899999999999999984 11 2 1234577889999999999777
No 495
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=48.91 E-value=22 Score=33.63 Aligned_cols=112 Identities=11% Similarity=0.180 Sum_probs=65.7
Q ss_pred ccChhHHHHHHHHHHhCCceecCCc---HHHH-----H-HHh-CCc-----------hHHHHHHHHHHcCCCEEEecCCc
Q 022982 66 LMPKPFIEEVVKRAHQHDVYVSTGD---WAEH-----L-IRN-GPS-----------AFKEYVEDCKQVGFDTIELNVGS 124 (289)
Q Consensus 66 l~p~~~l~eKI~l~~~~gV~v~~Gt---lfE~-----a-~~q-g~~-----------~~~~yl~~~k~lGF~~IEISdGt 124 (289)
..+++.=+...+.|+++|+....|. .+|. . +.| .|+ ..+++.+.++.+|.|+++|.-..
T Consensus 99 ~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~~~~~v~r~~P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~ 178 (365)
T 3sr7_A 99 QKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDDTSYQVKKSRPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINL 178 (365)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEC-----------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECH
T ss_pred cchhHHHHHHHHHHHHcCCCeecccccccccCccccceEehhhCCCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccc
Confidence 3345555555677778888666652 2222 0 111 121 36788899999999999987554
Q ss_pred c--------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccccCCCCccccccHHHHHHHHHHHHH
Q 022982 125 L--------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTEYVEDVDLLIRRAERCLE 196 (289)
Q Consensus 125 i--------~i~~~~r~~lI~~~~~~G~~v~~E~g~k~~~~evg~~~d~~~~~~~~~~~~~~~~~~~~~~~I~~~~~dLe 196 (289)
. +-+.+.+.+.|+.+++.- -+| |.+|. +|.. . + .+.+++..+
T Consensus 179 ~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~P-VivK~----vg~g--------~-----------s----~e~A~~l~~ 228 (365)
T 3sr7_A 179 MQELLMPEGEREFRSWKKHLSDYAKKL--QLP-FILKE----VGFG--------M-----------D----VKTIQTAID 228 (365)
T ss_dssp HHHHTSSSSCCCCHHHHHHHHHHHHHC--CSC-EEEEE----CSSC--------C-----------C----HHHHHHHHH
T ss_pred cccccCCCCCCcHHHHHHHHHHHHHhh--CCC-EEEEE----CCCC--------C-----------C----HHHHHHHHH
Confidence 3 122346778888888741 123 55552 1100 0 1 356788889
Q ss_pred ccCcEEEEecc
Q 022982 197 AGADMIMIDSD 207 (289)
Q Consensus 197 AGA~~ViiEar 207 (289)
+|||.|.|-++
T Consensus 229 aGad~I~V~g~ 239 (365)
T 3sr7_A 229 LGVKTVDISGR 239 (365)
T ss_dssp HTCCEEECCCB
T ss_pred cCCCEEEEeCC
Confidence 99999999876
No 496
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=48.80 E-value=23 Score=31.17 Aligned_cols=18 Identities=22% Similarity=0.580 Sum_probs=8.7
Q ss_pred HHHHHHHHHcCCCEEEec
Q 022982 104 KEYVEDCKQVGFDTIELN 121 (289)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS 121 (289)
++.++.++++||++|-++
T Consensus 36 ~~d~~~l~~~G~n~vR~~ 53 (317)
T 3aof_A 36 DEFFDIIKEAGFSHVRIP 53 (317)
T ss_dssp THHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 344444455555555543
No 497
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=48.78 E-value=59 Score=27.13 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=22.9
Q ss_pred HHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022982 72 IEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (289)
Q Consensus 72 l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (289)
+++.-++++.+|+.+.. +++++.|.+.|.+.|-+.+
T Consensus 67 ~~~l~~~~~~~~v~v~v---------------~~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 67 AEKAQAACREAGVPFIV---------------NDDVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHHHTCCEEE---------------ESCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHcCCeEEE---------------cCHHHHHHHcCCCEEEECC
Confidence 33333556667775543 1345678899999998843
No 498
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=48.75 E-value=17 Score=33.98 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=51.9
Q ss_pred cHHHHHHHHHHHHHccCcEEEEeccccccCCCCccHHHHHHHHhccC--CCceEEecC---------CchhHHHHHHHhC
Q 022982 183 DVDLLIRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG--LEKTMFEAT---------NPRTSEWFIRRYG 251 (289)
Q Consensus 183 ~~~~~I~~~~~dLeAGA~~ViiEarGI~d~~G~~r~d~v~~ii~~l~--~eklifEAP---------~k~qQ~~~I~~fG 251 (289)
|++++++.+.++.+|||..|=+=+|.=-+.....+.+...++++.+- .+ +|.--. ..++|...+..+.
T Consensus 30 TpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d-~iI~~TTgg~~~~~~~~eeR~~~~~~~~ 108 (314)
T 3lot_A 30 TPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSD-VVINVTTGGGGTLGIPVEERAKVVPALK 108 (314)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCC-CEEEECSSTTGGGTCCHHHHTTHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCC-eEEEeCCCCcCCCCCCHHHHHHHHHhcC
Confidence 79999999999999999999999994323334567777777776553 33 443321 3455556666667
Q ss_pred CC---cccc-cCC
Q 022982 252 PK---VNLF-VDH 260 (289)
Q Consensus 252 ~~---VNLg-I~~ 260 (289)
|+ +|+| +++
T Consensus 109 Pe~aSln~Gs~Nf 121 (314)
T 3lot_A 109 PEIATFNMGSMNF 121 (314)
T ss_dssp CSEEEEECCCEEC
T ss_pred CceeeecCCCccc
Confidence 75 4555 443
No 499
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=48.72 E-value=1.6e+02 Score=26.94 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=30.2
Q ss_pred ccEEEecCccccccChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022982 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (289)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (289)
+|++=+.+|+. + .+.++.+|++|+++...- . ..++ .+.+.+.|.|+|-++.
T Consensus 123 ~~~V~~~~g~~---~----~~~i~~~~~~g~~v~~~v--------~--t~~~-a~~a~~~GaD~i~v~g 173 (369)
T 3bw2_A 123 VPVVSFHFGVP---D----REVIARLRRAGTLTLVTA--------T--TPEE-ARAVEAAGADAVIAQG 173 (369)
T ss_dssp CSEEEEESSCC---C----HHHHHHHHHTTCEEEEEE--------S--SHHH-HHHHHHTTCSEEEEEC
T ss_pred CCEEEEeCCCC---c----HHHHHHHHHCCCeEEEEC--------C--CHHH-HHHHHHcCCCEEEEeC
Confidence 56666776653 2 233444566777655431 1 2333 4567789999999954
No 500
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=48.68 E-value=14 Score=39.44 Aligned_cols=51 Identities=22% Similarity=0.348 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHcCCCEEEe---------cCCcccCCh-hHHHHHHHHHHHcCCcccceee
Q 022982 101 SAFKEYVEDCKQVGFDTIEL---------NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (289)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEI---------SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~g 151 (289)
+..++-++.+|++||++|++ ..|..+.+- .+..++|+.|+++||.|+-..|
T Consensus 36 ~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 36 SLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp GGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 57888899999999999998 677777763 3567899999999999988776
Done!