Query 022985
Match_columns 289
No_of_seqs 121 out of 1111
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 07:37:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022985.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022985hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2728 Uncharacterized conser 100.0 7.7E-65 1.7E-69 454.1 24.4 280 7-288 18-301 (302)
2 PF04127 DFP: DNA / pantothena 100.0 1.1E-54 2.3E-59 381.6 14.6 177 17-249 1-185 (185)
3 PRK13982 bifunctional SbtC-lik 100.0 4.7E-53 1E-57 415.4 23.1 219 2-280 237-470 (475)
4 PRK09620 hypothetical protein; 100.0 5.5E-51 1.2E-55 368.9 22.3 209 17-280 1-223 (229)
5 PRK05579 bifunctional phosphop 100.0 4E-49 8.6E-54 382.1 22.5 218 2-280 172-397 (399)
6 TIGR00521 coaBC_dfp phosphopan 100.0 2E-48 4.4E-53 376.1 22.1 218 2-277 168-390 (390)
7 PRK06732 phosphopantothenate-- 100.0 4.1E-48 8.9E-53 350.0 21.6 203 20-278 1-226 (229)
8 TIGR02114 coaB_strep phosphopa 100.0 7.8E-46 1.7E-50 334.7 19.4 201 21-278 1-225 (227)
9 COG0452 Dfp Phosphopantothenoy 100.0 4.3E-40 9.4E-45 318.3 19.5 219 2-280 167-391 (392)
10 PRK05854 short chain dehydroge 97.7 0.00011 2.3E-09 69.0 8.2 37 16-70 11-47 (313)
11 PRK07062 short chain dehydroge 97.6 0.00022 4.8E-09 64.3 8.1 37 16-70 5-41 (265)
12 PRK05867 short chain dehydroge 97.6 0.00036 7.8E-09 62.5 9.2 37 16-70 6-42 (253)
13 PRK08416 7-alpha-hydroxysteroi 97.6 0.00027 5.9E-09 63.8 8.2 37 16-70 5-41 (260)
14 PRK06935 2-deoxy-D-gluconate 3 97.6 0.0004 8.7E-09 62.4 8.9 43 10-70 6-48 (258)
15 PRK07063 short chain dehydroge 97.5 0.00047 1E-08 62.0 9.2 37 16-70 4-40 (260)
16 PRK05876 short chain dehydroge 97.5 0.00051 1.1E-08 63.1 9.5 37 16-70 3-39 (275)
17 PRK06114 short chain dehydroge 97.5 0.00064 1.4E-08 61.0 9.5 37 16-70 5-41 (254)
18 PRK06194 hypothetical protein; 97.5 0.00067 1.4E-08 61.9 9.5 37 16-70 3-39 (287)
19 PRK07478 short chain dehydroge 97.5 0.00065 1.4E-08 60.8 9.2 36 17-70 4-39 (254)
20 PRK08589 short chain dehydroge 97.5 0.00057 1.2E-08 62.3 8.9 37 16-70 3-39 (272)
21 PRK07097 gluconate 5-dehydroge 97.5 0.00071 1.5E-08 61.2 9.4 37 16-70 7-43 (265)
22 PRK07035 short chain dehydroge 97.5 0.00076 1.6E-08 60.2 9.4 37 16-70 5-41 (252)
23 KOG1205 Predicted dehydrogenas 97.5 0.00036 7.8E-09 65.5 7.4 95 16-162 9-103 (282)
24 COG4221 Short-chain alcohol de 97.5 0.00039 8.4E-09 63.8 7.4 38 17-72 4-41 (246)
25 PRK06398 aldose dehydrogenase; 97.4 0.00031 6.6E-09 63.6 6.6 37 16-70 3-39 (258)
26 PRK06128 oxidoreductase; Provi 97.4 0.00072 1.6E-08 62.7 9.1 36 16-69 52-87 (300)
27 PRK12481 2-deoxy-D-gluconate 3 97.4 0.00059 1.3E-08 61.5 8.2 36 16-69 5-40 (251)
28 PRK06138 short chain dehydroge 97.4 0.00084 1.8E-08 59.6 9.1 36 17-70 3-38 (252)
29 PRK07523 gluconate 5-dehydroge 97.4 0.00095 2.1E-08 59.8 9.5 37 16-70 7-43 (255)
30 PRK06200 2,3-dihydroxy-2,3-dih 97.4 0.00069 1.5E-08 61.1 8.6 36 17-70 4-39 (263)
31 PRK07533 enoyl-(acyl carrier p 97.4 0.00075 1.6E-08 61.1 8.8 39 15-70 6-45 (258)
32 PRK12937 short chain dehydroge 97.4 0.001 2.2E-08 58.8 9.5 37 16-70 2-38 (245)
33 PRK06139 short chain dehydroge 97.4 0.00085 1.8E-08 63.8 9.4 37 16-70 4-40 (330)
34 PRK08628 short chain dehydroge 97.4 0.00078 1.7E-08 60.4 8.6 37 16-70 4-40 (258)
35 PRK06197 short chain dehydroge 97.4 0.00059 1.3E-08 63.3 8.0 37 16-70 13-49 (306)
36 PRK05872 short chain dehydroge 97.4 0.00059 1.3E-08 63.2 7.9 38 15-70 5-42 (296)
37 PRK07109 short chain dehydroge 97.4 0.001 2.2E-08 63.1 9.7 37 16-70 5-41 (334)
38 PRK07814 short chain dehydroge 97.4 0.00099 2.1E-08 60.2 9.2 37 16-70 7-43 (263)
39 PRK08226 short chain dehydroge 97.4 0.001 2.2E-08 59.8 9.2 37 16-70 3-39 (263)
40 PRK05866 short chain dehydroge 97.4 0.0011 2.4E-08 61.5 9.6 38 15-70 36-73 (293)
41 PRK07984 enoyl-(acyl carrier p 97.4 0.00083 1.8E-08 61.4 8.6 37 17-70 4-41 (262)
42 PRK08213 gluconate 5-dehydroge 97.4 0.0012 2.5E-08 59.4 9.4 37 16-70 9-45 (259)
43 PRK08085 gluconate 5-dehydroge 97.4 0.0012 2.5E-08 59.2 9.3 36 17-70 7-42 (254)
44 PRK08690 enoyl-(acyl carrier p 97.4 0.00093 2E-08 60.7 8.7 36 17-69 4-40 (261)
45 TIGR01832 kduD 2-deoxy-D-gluco 97.4 0.00087 1.9E-08 59.6 8.4 37 16-70 2-38 (248)
46 PRK08159 enoyl-(acyl carrier p 97.3 0.001 2.2E-08 61.0 9.0 38 15-69 6-44 (272)
47 PRK07791 short chain dehydroge 97.3 0.0012 2.6E-08 60.9 9.5 36 17-70 4-39 (286)
48 PRK07370 enoyl-(acyl carrier p 97.3 0.00099 2.1E-08 60.4 8.8 36 17-69 4-40 (258)
49 PRK12823 benD 1,6-dihydroxycyc 97.3 0.0011 2.4E-08 59.4 9.0 37 16-70 5-41 (260)
50 PRK08643 acetoin reductase; Va 97.3 0.0013 2.7E-08 58.9 9.3 34 19-70 2-35 (256)
51 PRK08303 short chain dehydroge 97.3 0.0012 2.7E-08 61.8 9.6 38 16-71 5-42 (305)
52 PRK13394 3-hydroxybutyrate deh 97.3 0.0013 2.9E-08 58.7 9.4 37 16-70 4-40 (262)
53 PRK12429 3-hydroxybutyrate deh 97.3 0.0014 3E-08 58.3 9.5 36 17-70 2-37 (258)
54 PRK06603 enoyl-(acyl carrier p 97.3 0.0011 2.4E-08 60.2 9.0 37 16-69 5-42 (260)
55 PF00106 adh_short: short chai 97.3 0.0011 2.3E-08 55.3 8.0 93 20-163 1-93 (167)
56 PRK06505 enoyl-(acyl carrier p 97.3 0.0012 2.5E-08 60.7 8.9 37 16-69 4-41 (271)
57 PRK08862 short chain dehydroge 97.3 0.0013 2.8E-08 58.9 8.9 36 17-70 3-38 (227)
58 TIGR03325 BphB_TodD cis-2,3-di 97.3 0.00072 1.6E-08 61.0 7.3 36 17-70 3-38 (262)
59 PRK08936 glucose-1-dehydrogena 97.3 0.0016 3.4E-08 58.7 9.4 37 16-70 4-40 (261)
60 PRK07774 short chain dehydroge 97.3 0.0015 3.2E-08 58.0 9.1 36 17-70 4-39 (250)
61 COG0300 DltE Short-chain dehyd 97.3 0.0016 3.5E-08 60.6 9.6 39 16-72 3-41 (265)
62 PRK06079 enoyl-(acyl carrier p 97.3 0.00075 1.6E-08 60.9 7.3 38 16-70 4-42 (252)
63 PRK12826 3-ketoacyl-(acyl-carr 97.3 0.0016 3.5E-08 57.6 9.2 37 16-70 3-39 (251)
64 PRK09242 tropinone reductase; 97.3 0.0011 2.5E-08 59.3 8.3 37 16-70 6-42 (257)
65 PRK08594 enoyl-(acyl carrier p 97.3 0.00083 1.8E-08 61.0 7.3 38 16-70 4-42 (257)
66 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.002 4.4E-08 57.0 9.6 37 16-70 4-40 (239)
67 PRK08415 enoyl-(acyl carrier p 97.3 0.0014 3E-08 60.4 8.8 37 17-70 3-40 (274)
68 PRK06124 gluconate 5-dehydroge 97.2 0.002 4.3E-08 57.6 9.5 38 15-70 7-44 (256)
69 KOG1201 Hydroxysteroid 17-beta 97.2 0.00088 1.9E-08 63.1 7.4 39 14-70 33-71 (300)
70 PRK06196 oxidoreductase; Provi 97.2 0.0018 4E-08 60.4 9.6 38 15-70 22-59 (315)
71 PRK08339 short chain dehydroge 97.2 0.0018 3.9E-08 58.9 9.2 37 16-70 5-41 (263)
72 PRK12743 oxidoreductase; Provi 97.2 0.0017 3.7E-08 58.3 8.9 33 19-69 2-34 (256)
73 PRK12859 3-ketoacyl-(acyl-carr 97.2 0.0024 5.1E-08 57.6 9.8 106 16-163 3-109 (256)
74 PRK12938 acetyacetyl-CoA reduc 97.2 0.0019 4E-08 57.4 9.0 36 17-70 1-36 (246)
75 PRK08993 2-deoxy-D-gluconate 3 97.2 0.0016 3.6E-08 58.5 8.7 37 15-69 6-42 (253)
76 PRK08277 D-mannonate oxidoredu 97.2 0.0019 4.2E-08 58.6 9.2 37 16-70 7-43 (278)
77 PRK12827 short chain dehydroge 97.2 0.0023 4.9E-08 56.5 9.3 36 17-70 4-39 (249)
78 PRK07890 short chain dehydroge 97.2 0.0021 4.5E-08 57.4 9.2 36 17-70 3-38 (258)
79 PRK05557 fabG 3-ketoacyl-(acyl 97.2 0.0025 5.3E-08 56.0 9.5 36 17-70 3-38 (248)
80 PRK08265 short chain dehydroge 97.2 0.0013 2.9E-08 59.4 7.9 37 16-70 3-39 (261)
81 PRK12939 short chain dehydroge 97.2 0.0025 5.4E-08 56.4 9.5 37 16-70 4-40 (250)
82 PRK08278 short chain dehydroge 97.2 0.0024 5.1E-08 58.3 9.5 38 16-71 3-40 (273)
83 PRK08251 short chain dehydroge 97.2 0.0014 3.1E-08 58.2 7.9 34 19-70 2-35 (248)
84 PRK05717 oxidoreductase; Valid 97.2 0.0017 3.6E-08 58.3 8.3 37 15-69 6-42 (255)
85 PRK07576 short chain dehydroge 97.2 0.0024 5.1E-08 58.0 9.3 37 16-70 6-42 (264)
86 PRK06172 short chain dehydroge 97.2 0.0024 5.1E-08 57.1 9.1 37 16-70 4-40 (253)
87 PRK07792 fabG 3-ketoacyl-(acyl 97.2 0.002 4.4E-08 60.1 9.0 37 15-69 8-44 (306)
88 PRK12744 short chain dehydroge 97.1 0.0027 5.9E-08 57.0 9.4 37 16-70 5-41 (257)
89 PRK07985 oxidoreductase; Provi 97.1 0.0024 5.2E-08 59.3 8.9 36 16-69 46-81 (294)
90 PRK09072 short chain dehydroge 97.1 0.003 6.6E-08 56.9 9.3 36 17-70 3-38 (263)
91 PRK12746 short chain dehydroge 97.1 0.0037 8.1E-08 55.7 9.8 36 16-69 3-38 (254)
92 PRK08945 putative oxoacyl-(acy 97.1 0.0015 3.2E-08 58.2 7.1 37 16-70 9-45 (247)
93 PRK07231 fabG 3-ketoacyl-(acyl 97.1 0.003 6.5E-08 55.9 8.9 37 17-71 3-39 (251)
94 PRK06841 short chain dehydroge 97.1 0.0025 5.3E-08 56.9 8.3 37 16-70 12-48 (255)
95 PRK07453 protochlorophyllide o 97.1 0.0027 5.8E-08 59.4 8.8 36 17-70 4-39 (322)
96 KOG1210 Predicted 3-ketosphing 97.1 0.0028 6E-08 60.2 8.8 35 20-72 34-68 (331)
97 PRK06949 short chain dehydroge 97.1 0.0037 8.1E-08 55.7 9.3 37 16-70 6-42 (258)
98 PRK08063 enoyl-(acyl carrier p 97.1 0.0039 8.5E-08 55.3 9.3 35 17-69 2-36 (250)
99 PLN02253 xanthoxin dehydrogena 97.1 0.0028 6E-08 57.7 8.5 38 15-70 14-51 (280)
100 PRK12935 acetoacetyl-CoA reduc 97.1 0.0038 8.2E-08 55.4 9.2 35 17-69 4-38 (247)
101 PRK09186 flagellin modificatio 97.0 0.0023 5E-08 57.0 7.8 36 17-70 2-37 (256)
102 PRK12747 short chain dehydroge 97.0 0.0047 1E-07 55.2 9.8 35 17-69 2-36 (252)
103 PRK12745 3-ketoacyl-(acyl-carr 97.0 0.0033 7.2E-08 56.0 8.7 33 20-70 3-35 (256)
104 PRK06997 enoyl-(acyl carrier p 97.0 0.0032 7E-08 57.2 8.8 36 17-69 4-40 (260)
105 PRK07024 short chain dehydroge 97.0 0.0029 6.2E-08 56.9 8.3 34 19-70 2-35 (257)
106 PRK06500 short chain dehydroge 97.0 0.0038 8.2E-08 55.3 9.0 36 17-70 4-39 (249)
107 PRK06077 fabG 3-ketoacyl-(acyl 97.0 0.0046 1E-07 54.8 9.5 36 17-70 4-39 (252)
108 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.0046 1E-07 54.2 9.3 36 17-70 3-38 (246)
109 PRK06171 sorbitol-6-phosphate 97.0 0.0027 5.9E-08 57.2 8.0 38 16-71 6-43 (266)
110 PRK06720 hypothetical protein; 97.0 0.0057 1.2E-07 52.9 9.5 37 16-70 13-49 (169)
111 PRK05875 short chain dehydroge 97.0 0.003 6.6E-08 57.2 8.2 37 16-70 4-40 (276)
112 TIGR03206 benzo_BadH 2-hydroxy 97.0 0.0048 1E-07 54.7 9.3 36 17-70 1-36 (250)
113 PRK07825 short chain dehydroge 97.0 0.0051 1.1E-07 55.7 9.6 36 17-70 3-38 (273)
114 PRK06113 7-alpha-hydroxysteroi 97.0 0.0053 1.1E-07 55.0 9.6 37 16-70 8-44 (255)
115 PRK06484 short chain dehydroge 97.0 0.0023 4.9E-08 63.7 7.8 25 45-70 278-302 (520)
116 PRK05565 fabG 3-ketoacyl-(acyl 97.0 0.0051 1.1E-07 54.2 9.3 36 16-69 2-38 (247)
117 TIGR01963 PHB_DH 3-hydroxybuty 97.0 0.0045 9.8E-08 54.9 8.9 34 19-70 1-34 (255)
118 PRK07856 short chain dehydroge 97.0 0.0027 5.8E-08 56.9 7.5 38 16-71 3-40 (252)
119 PRK06179 short chain dehydroge 97.0 0.0039 8.4E-08 56.3 8.5 36 18-71 3-38 (270)
120 PRK07831 short chain dehydroge 96.9 0.0031 6.7E-08 56.8 7.8 37 16-69 14-50 (262)
121 PRK08340 glucose-1-dehydrogena 96.9 0.0047 1E-07 55.6 9.0 33 20-70 1-33 (259)
122 PRK06523 short chain dehydroge 96.9 0.003 6.6E-08 56.6 7.6 39 15-71 5-43 (260)
123 PRK08217 fabG 3-ketoacyl-(acyl 96.9 0.0059 1.3E-07 54.0 9.4 36 17-70 3-38 (253)
124 PRK06701 short chain dehydroge 96.9 0.0048 1E-07 57.1 9.1 37 16-70 43-79 (290)
125 TIGR01289 LPOR light-dependent 96.9 0.0039 8.5E-08 58.4 8.6 35 18-70 2-37 (314)
126 PRK07806 short chain dehydroge 96.9 0.0059 1.3E-07 54.2 9.3 37 16-70 3-39 (248)
127 PLN02780 ketoreductase/ oxidor 96.9 0.0022 4.7E-08 60.7 6.7 35 18-70 52-86 (320)
128 PRK07677 short chain dehydroge 96.9 0.0048 1E-07 55.2 8.7 34 19-70 1-34 (252)
129 PRK06914 short chain dehydroge 96.9 0.0034 7.3E-08 57.0 7.7 35 18-70 2-36 (280)
130 PRK12829 short chain dehydroge 96.9 0.0052 1.1E-07 54.9 8.7 37 16-70 8-44 (264)
131 PRK08263 short chain dehydroge 96.9 0.0035 7.5E-08 57.1 7.7 35 18-70 2-36 (275)
132 PRK12825 fabG 3-ketoacyl-(acyl 96.9 0.0068 1.5E-07 53.1 9.2 37 17-71 4-40 (249)
133 PRK06484 short chain dehydroge 96.9 0.0045 9.8E-08 61.5 8.9 36 17-70 3-38 (520)
134 PRK07201 short chain dehydroge 96.9 0.0047 1E-07 63.1 9.2 37 16-70 368-404 (657)
135 PRK12384 sorbitol-6-phosphate 96.9 0.0043 9.3E-08 55.6 7.9 34 19-70 2-35 (259)
136 PRK06463 fabG 3-ketoacyl-(acyl 96.8 0.0043 9.2E-08 55.6 7.8 37 16-70 4-40 (255)
137 PRK07067 sorbitol dehydrogenas 96.8 0.0061 1.3E-07 54.6 8.7 36 17-70 4-39 (257)
138 PRK12748 3-ketoacyl-(acyl-carr 96.8 0.0068 1.5E-07 54.4 9.0 38 16-70 2-40 (256)
139 PRK06198 short chain dehydroge 96.8 0.0065 1.4E-07 54.3 8.7 37 16-70 3-40 (260)
140 PRK06057 short chain dehydroge 96.8 0.0078 1.7E-07 54.0 9.1 36 17-70 5-40 (255)
141 PRK07889 enoyl-(acyl carrier p 96.8 0.0043 9.3E-08 56.2 7.5 38 16-70 4-42 (256)
142 PRK08703 short chain dehydroge 96.8 0.0068 1.5E-07 53.7 8.5 37 16-70 3-39 (239)
143 PRK09134 short chain dehydroge 96.8 0.0084 1.8E-07 53.8 9.2 36 17-70 7-42 (258)
144 PRK07326 short chain dehydroge 96.8 0.0085 1.9E-07 52.7 8.9 36 17-70 4-39 (237)
145 PRK12828 short chain dehydroge 96.7 0.0092 2E-07 52.2 9.0 37 16-70 4-40 (239)
146 PRK06947 glucose-1-dehydrogena 96.7 0.0083 1.8E-07 53.3 8.8 33 20-70 3-35 (248)
147 PRK05650 short chain dehydroge 96.7 0.0088 1.9E-07 54.2 8.9 33 20-70 1-33 (270)
148 PRK07832 short chain dehydroge 96.7 0.0094 2E-07 54.1 9.1 33 20-70 1-33 (272)
149 PRK09135 pteridine reductase; 96.7 0.0049 1.1E-07 54.3 6.9 36 17-70 4-39 (249)
150 PRK07454 short chain dehydroge 96.7 0.01 2.2E-07 52.6 8.9 35 18-70 5-39 (241)
151 PRK06182 short chain dehydroge 96.7 0.0079 1.7E-07 54.6 8.3 35 18-70 2-36 (273)
152 TIGR02415 23BDH acetoin reduct 96.7 0.011 2.4E-07 52.5 9.0 33 20-70 1-33 (254)
153 PRK06550 fabG 3-ketoacyl-(acyl 96.7 0.005 1.1E-07 54.2 6.7 37 17-71 3-39 (235)
154 PRK07577 short chain dehydroge 96.6 0.0063 1.4E-07 53.5 7.2 36 18-71 2-37 (234)
155 PRK08220 2,3-dihydroxybenzoate 96.6 0.0075 1.6E-07 53.6 7.8 38 16-71 5-42 (252)
156 PRK06181 short chain dehydroge 96.6 0.012 2.5E-07 52.9 9.1 34 19-70 1-34 (263)
157 PRK06180 short chain dehydroge 96.6 0.0066 1.4E-07 55.4 7.3 35 18-70 3-37 (277)
158 PRK07904 short chain dehydroge 96.6 0.012 2.6E-07 53.2 8.8 37 17-71 6-43 (253)
159 PRK08264 short chain dehydroge 96.6 0.0064 1.4E-07 53.6 6.8 38 17-72 4-42 (238)
160 PRK08642 fabG 3-ketoacyl-(acyl 96.5 0.0088 1.9E-07 53.1 7.5 36 17-70 3-38 (253)
161 PRK06482 short chain dehydroge 96.5 0.0085 1.8E-07 54.3 7.5 34 19-70 2-35 (276)
162 PRK05599 hypothetical protein; 96.5 0.009 1.9E-07 53.7 7.6 32 20-70 1-32 (246)
163 PRK12936 3-ketoacyl-(acyl-carr 96.5 0.016 3.4E-07 51.1 9.0 36 16-69 3-38 (245)
164 PRK08267 short chain dehydroge 96.5 0.0094 2E-07 53.5 7.7 33 20-70 2-34 (260)
165 TIGR01829 AcAcCoA_reduct aceto 96.5 0.017 3.6E-07 50.8 9.0 32 20-69 1-32 (242)
166 PRK06125 short chain dehydroge 96.5 0.015 3.2E-07 52.2 8.9 37 16-70 4-40 (259)
167 PRK06123 short chain dehydroge 96.5 0.016 3.5E-07 51.3 8.9 33 19-69 2-34 (248)
168 PRK06483 dihydromonapterin red 96.5 0.011 2.3E-07 52.3 7.5 34 19-70 2-35 (236)
169 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.016 3.4E-07 56.9 9.4 52 17-69 186-242 (450)
170 KOG0725 Reductases with broad 96.4 0.015 3.3E-07 54.0 8.6 40 15-72 4-43 (270)
171 TIGR02632 RhaD_aldol-ADH rhamn 96.4 0.011 2.4E-07 61.7 8.3 38 15-70 410-447 (676)
172 KOG1208 Dehydrogenases with di 96.4 0.019 4.1E-07 54.7 9.2 40 14-71 30-69 (314)
173 PRK07775 short chain dehydroge 96.3 0.027 5.8E-07 51.4 9.6 37 16-70 7-43 (274)
174 PRK05855 short chain dehydroge 96.3 0.021 4.6E-07 56.8 9.6 37 16-70 312-348 (582)
175 PRK10538 malonic semialdehyde 96.3 0.013 2.9E-07 52.3 7.4 25 46-70 9-33 (248)
176 PRK05993 short chain dehydroge 96.3 0.021 4.6E-07 52.1 8.7 35 18-70 3-37 (277)
177 KOG1502 Flavonol reductase/cin 96.2 0.01 2.2E-07 56.8 6.5 37 18-72 5-41 (327)
178 PLN02778 3,5-epimerase/4-reduc 96.2 0.013 2.7E-07 54.8 7.0 34 17-68 7-40 (298)
179 PRK05693 short chain dehydroge 96.2 0.017 3.7E-07 52.3 7.7 33 20-70 2-34 (274)
180 PRK07074 short chain dehydroge 96.2 0.017 3.8E-07 51.6 7.5 34 19-70 2-35 (257)
181 PRK09730 putative NAD(P)-bindi 96.2 0.026 5.6E-07 49.8 8.5 32 20-69 2-33 (247)
182 PRK07069 short chain dehydroge 96.2 0.016 3.5E-07 51.3 7.1 25 45-70 8-32 (251)
183 TIGR02685 pter_reduc_Leis pter 96.1 0.026 5.5E-07 51.1 8.2 33 20-70 2-34 (267)
184 PRK12824 acetoacetyl-CoA reduc 96.0 0.036 7.9E-07 48.7 8.6 33 20-70 3-35 (245)
185 smart00822 PKS_KR This enzymat 95.9 0.042 9E-07 44.9 7.9 24 46-69 9-33 (180)
186 PRK12367 short chain dehydroge 95.9 0.011 2.4E-07 53.7 4.7 39 15-71 10-48 (245)
187 PRK07060 short chain dehydroge 95.9 0.028 6E-07 49.6 7.1 37 16-70 6-42 (245)
188 PRK08177 short chain dehydroge 95.8 0.021 4.5E-07 50.3 6.1 34 20-71 2-35 (225)
189 COG1028 FabG Dehydrogenases wi 95.8 0.017 3.6E-07 51.4 5.5 39 16-72 2-40 (251)
190 COG1086 Predicted nucleoside-d 95.8 0.024 5.1E-07 57.8 6.9 40 15-72 246-285 (588)
191 KOG4169 15-hydroxyprostaglandi 95.7 0.024 5.2E-07 51.9 6.0 37 16-70 2-38 (261)
192 PRK08324 short chain dehydroge 95.7 0.055 1.2E-06 56.4 9.3 38 15-70 418-455 (681)
193 PLN02653 GDP-mannose 4,6-dehyd 95.6 0.018 4E-07 54.0 5.3 39 15-71 2-40 (340)
194 PRK13656 trans-2-enoyl-CoA red 95.6 0.059 1.3E-06 52.9 8.8 34 17-69 39-74 (398)
195 PRK06940 short chain dehydroge 95.5 0.068 1.5E-06 48.9 8.5 22 48-70 12-33 (275)
196 PRK09987 dTDP-4-dehydrorhamnos 95.5 0.029 6.4E-07 52.1 6.2 32 20-70 1-32 (299)
197 PF13561 adh_short_C2: Enoyl-( 95.5 0.043 9.4E-07 48.8 7.1 82 45-163 4-86 (241)
198 TIGR01831 fabG_rel 3-oxoacyl-( 95.5 0.059 1.3E-06 47.5 7.7 25 45-70 7-31 (239)
199 TIGR03466 HpnA hopanoid-associ 95.4 0.042 9.2E-07 50.5 6.8 35 20-72 1-35 (328)
200 PRK15181 Vi polysaccharide bio 95.2 0.033 7.3E-07 52.8 5.4 44 9-70 5-48 (348)
201 PLN00015 protochlorophyllide r 95.2 0.059 1.3E-06 50.2 7.0 25 45-70 6-31 (308)
202 PRK08125 bifunctional UDP-gluc 95.1 0.036 7.8E-07 57.5 5.9 37 17-71 313-350 (660)
203 PLN02583 cinnamoyl-CoA reducta 95.1 0.043 9.3E-07 50.9 5.7 36 17-70 4-39 (297)
204 TIGR02622 CDP_4_6_dhtase CDP-g 95.1 0.039 8.4E-07 52.2 5.5 37 17-71 2-38 (349)
205 TIGR01830 3oxo_ACP_reduc 3-oxo 95.0 0.12 2.6E-06 45.1 8.0 25 46-70 7-31 (239)
206 PRK12742 oxidoreductase; Provi 94.9 0.048 1E-06 47.9 5.4 36 16-69 3-38 (237)
207 PLN02662 cinnamyl-alcohol dehy 94.9 0.047 1E-06 50.4 5.6 36 18-71 3-38 (322)
208 PRK06300 enoyl-(acyl carrier p 94.8 0.043 9.3E-07 51.7 5.0 37 16-68 5-41 (299)
209 PRK05786 fabG 3-ketoacyl-(acyl 94.8 0.056 1.2E-06 47.5 5.4 36 17-70 3-38 (238)
210 PRK07578 short chain dehydroge 94.6 0.09 2E-06 45.3 6.3 31 21-70 2-32 (199)
211 PLN02730 enoyl-[acyl-carrier-p 94.6 0.052 1.1E-06 51.3 5.0 36 15-66 5-40 (303)
212 PLN02572 UDP-sulfoquinovose sy 94.5 0.055 1.2E-06 53.6 5.2 37 15-69 43-79 (442)
213 PF04321 RmlD_sub_bind: RmlD s 94.4 0.072 1.6E-06 49.5 5.5 33 20-70 1-33 (286)
214 PF01073 3Beta_HSD: 3-beta hyd 94.4 0.075 1.6E-06 49.4 5.6 25 46-70 6-32 (280)
215 PLN02986 cinnamyl-alcohol dehy 94.4 0.076 1.6E-06 49.4 5.6 38 17-72 3-40 (322)
216 PLN00198 anthocyanidin reducta 94.4 0.081 1.8E-06 49.6 5.7 37 17-71 7-43 (338)
217 PRK06924 short chain dehydroge 94.3 0.067 1.4E-06 47.5 4.8 34 20-71 2-35 (251)
218 KOG1209 1-Acyl dihydroxyaceton 94.2 0.061 1.3E-06 49.1 4.2 39 17-72 5-43 (289)
219 PRK06101 short chain dehydroge 94.1 0.078 1.7E-06 47.2 4.8 33 20-70 2-34 (240)
220 PLN02686 cinnamoyl-CoA reducta 94.1 0.092 2E-06 50.5 5.6 37 16-70 50-86 (367)
221 PLN02989 cinnamyl-alcohol dehy 94.1 0.09 2E-06 48.9 5.3 36 18-71 4-39 (325)
222 PRK07424 bifunctional sterol d 93.9 0.098 2.1E-06 51.6 5.4 37 16-70 175-211 (406)
223 PRK09291 short chain dehydroge 93.8 0.11 2.3E-06 46.3 5.1 34 19-70 2-35 (257)
224 PLN02214 cinnamoyl-CoA reducta 93.8 0.11 2.4E-06 49.2 5.5 37 17-71 8-44 (342)
225 PF08659 KR: KR domain; Inter 93.8 0.14 3.1E-06 44.1 5.7 25 46-70 9-34 (181)
226 KOG1014 17 beta-hydroxysteroid 93.7 0.12 2.6E-06 49.1 5.4 112 46-196 58-170 (312)
227 PF13460 NAD_binding_10: NADH( 93.7 0.12 2.6E-06 43.8 5.0 28 45-72 6-33 (183)
228 PRK07102 short chain dehydroge 93.6 0.12 2.5E-06 45.8 5.0 33 20-70 2-34 (243)
229 PLN02657 3,8-divinyl protochlo 93.6 0.13 2.9E-06 50.0 5.7 40 15-72 56-95 (390)
230 PRK09009 C factor cell-cell si 93.5 0.22 4.8E-06 43.8 6.6 32 20-69 1-34 (235)
231 TIGR01472 gmd GDP-mannose 4,6- 93.5 0.11 2.4E-06 48.8 4.9 34 20-71 1-34 (343)
232 PLN00141 Tic62-NAD(P)-related 93.5 0.14 3.1E-06 46.0 5.4 38 16-71 14-51 (251)
233 PLN02650 dihydroflavonol-4-red 93.3 0.14 3E-06 48.3 5.3 36 18-71 4-39 (351)
234 COG3967 DltE Short-chain dehyd 93.3 0.14 3E-06 46.5 4.8 38 17-72 3-40 (245)
235 PLN02240 UDP-glucose 4-epimera 93.2 0.15 3.3E-06 47.7 5.3 35 17-69 3-37 (352)
236 PLN03209 translocon at the inn 93.1 0.17 3.7E-06 52.1 5.8 37 17-71 78-114 (576)
237 PLN02896 cinnamyl-alcohol dehy 93.1 0.18 3.9E-06 47.7 5.7 37 16-70 7-43 (353)
238 CHL00194 ycf39 Ycf39; Provisio 92.8 0.17 3.7E-06 47.2 5.0 33 21-71 2-34 (317)
239 PRK08017 oxidoreductase; Provi 92.6 0.2 4.3E-06 44.5 5.0 33 20-70 3-35 (256)
240 PLN02260 probable rhamnose bio 92.6 0.27 5.9E-06 50.9 6.7 32 18-67 379-410 (668)
241 PRK07023 short chain dehydroge 92.6 0.19 4.1E-06 44.5 4.9 34 20-71 2-35 (243)
242 PRK05884 short chain dehydroge 92.6 0.18 3.9E-06 44.6 4.7 32 21-70 2-33 (223)
243 TIGR03589 PseB UDP-N-acetylglu 92.6 0.2 4.2E-06 47.2 5.1 36 17-70 2-39 (324)
244 PLN02695 GDP-D-mannose-3',5'-e 92.5 0.21 4.5E-06 48.1 5.3 35 18-70 20-54 (370)
245 PLN02427 UDP-apiose/xylose syn 92.4 0.24 5.2E-06 47.5 5.5 40 14-71 9-49 (386)
246 PLN02206 UDP-glucuronate decar 92.2 0.24 5.1E-06 49.2 5.4 34 18-69 118-151 (442)
247 PLN00016 RNA-binding protein; 91.9 0.18 4E-06 48.4 4.1 39 17-72 50-91 (378)
248 cd01078 NAD_bind_H4MPT_DH NADP 91.6 0.54 1.2E-05 40.9 6.4 37 16-70 25-61 (194)
249 COG2910 Putative NADH-flavin r 91.6 0.17 3.6E-06 45.2 3.1 31 45-75 8-38 (211)
250 PRK12446 undecaprenyldiphospho 91.5 0.25 5.4E-06 47.4 4.6 39 20-72 2-40 (352)
251 TIGR01214 rmlD dTDP-4-dehydror 91.4 0.25 5.5E-06 44.7 4.3 25 46-70 8-32 (287)
252 PF03033 Glyco_transf_28: Glyc 91.3 0.18 3.8E-06 40.8 2.8 35 22-70 1-35 (139)
253 TIGR03649 ergot_EASG ergot alk 91.3 0.28 6E-06 44.8 4.4 27 46-72 8-34 (285)
254 COG1249 Lpd Pyruvate/2-oxoglut 91.2 0.42 9E-06 47.9 5.9 58 16-75 133-210 (454)
255 PRK06953 short chain dehydroge 90.9 0.37 8E-06 42.2 4.7 33 20-70 2-34 (222)
256 PRK06719 precorrin-2 dehydroge 90.9 0.44 9.5E-06 40.8 5.0 34 16-68 10-43 (157)
257 PF01370 Epimerase: NAD depend 90.9 0.46 1E-05 41.3 5.3 27 46-72 7-33 (236)
258 PRK06718 precorrin-2 dehydroge 90.6 0.52 1.1E-05 41.9 5.4 35 16-69 7-41 (202)
259 PLN02166 dTDP-glucose 4,6-dehy 90.2 0.52 1.1E-05 46.7 5.5 35 18-70 119-153 (436)
260 cd01075 NAD_bind_Leu_Phe_Val_D 89.9 1 2.2E-05 40.0 6.6 35 14-67 23-57 (200)
261 PRK10217 dTDP-glucose 4,6-dehy 89.9 0.43 9.4E-06 44.8 4.6 33 20-70 2-34 (355)
262 TIGR02813 omega_3_PfaA polyket 89.9 1.4 3.1E-05 52.7 9.6 37 33-70 1994-2031(2582)
263 PLN02725 GDP-4-keto-6-deoxyman 89.6 0.27 5.8E-06 44.9 2.8 24 45-68 5-28 (306)
264 PRK10675 UDP-galactose-4-epime 89.4 0.63 1.4E-05 43.3 5.2 32 21-70 2-33 (338)
265 KOG1199 Short-chain alcohol de 89.3 1.5 3.2E-05 39.1 7.0 38 17-72 7-44 (260)
266 PRK08219 short chain dehydroge 89.2 0.58 1.3E-05 40.5 4.5 33 19-70 3-35 (227)
267 COG0451 WcaG Nucleoside-diphos 89.1 0.64 1.4E-05 42.3 4.9 34 21-72 2-35 (314)
268 PF13241 NAD_binding_7: Putati 89.1 0.42 9E-06 37.7 3.2 36 16-70 4-39 (103)
269 PRK11150 rfaD ADP-L-glycero-D- 89.0 0.6 1.3E-05 43.0 4.6 26 46-71 8-33 (308)
270 PRK14106 murD UDP-N-acetylmura 88.8 0.7 1.5E-05 45.3 5.3 35 17-70 3-37 (450)
271 TIGR01777 yfcH conserved hypot 88.8 0.62 1.3E-05 42.0 4.5 27 46-72 7-33 (292)
272 TIGR01500 sepiapter_red sepiap 88.6 0.71 1.5E-05 41.3 4.7 32 21-70 2-37 (256)
273 COG1091 RfbD dTDP-4-dehydrorha 88.5 0.7 1.5E-05 43.5 4.7 25 45-70 8-32 (281)
274 COG0452 Dfp Phosphopantothenoy 87.3 0.041 8.8E-07 54.0 -4.5 215 20-240 80-324 (392)
275 PRK11908 NAD-dependent epimera 87.1 0.96 2.1E-05 42.6 4.9 33 20-70 2-35 (347)
276 cd01080 NAD_bind_m-THF_DH_Cycl 87.1 2 4.3E-05 37.3 6.4 37 15-70 40-77 (168)
277 PRK08309 short chain dehydroge 87.0 1.2 2.5E-05 38.9 4.9 32 20-70 1-32 (177)
278 KOG1207 Diacetyl reductase/L-x 87.0 1.7 3.7E-05 38.7 5.9 38 16-71 4-41 (245)
279 PRK07041 short chain dehydroge 86.7 0.79 1.7E-05 40.0 3.8 25 46-70 6-30 (230)
280 PRK14194 bifunctional 5,10-met 86.1 1.7 3.7E-05 41.4 5.9 47 6-70 145-192 (301)
281 PF12242 Eno-Rase_NADH_b: NAD( 86.1 1.7 3.8E-05 33.2 4.8 41 9-68 28-71 (78)
282 PF02719 Polysacc_synt_2: Poly 86.0 0.89 1.9E-05 43.1 3.9 30 22-69 1-31 (293)
283 PF05368 NmrA: NmrA-like famil 86.0 1.2 2.5E-05 39.4 4.6 26 46-71 7-32 (233)
284 PF07993 NAD_binding_4: Male s 85.5 0.27 5.9E-06 44.4 0.2 28 45-72 4-33 (249)
285 TIGR01179 galE UDP-glucose-4-e 85.4 1.3 2.8E-05 40.3 4.7 24 46-69 8-31 (328)
286 TIGR01746 Thioester-redct thio 85.2 1.3 2.8E-05 41.0 4.6 27 46-72 8-36 (367)
287 PRK14175 bifunctional 5,10-met 84.8 2.5 5.5E-05 39.9 6.3 47 6-70 144-191 (286)
288 TIGR01470 cysG_Nterm siroheme 84.6 2 4.3E-05 38.3 5.3 36 16-70 6-41 (205)
289 TIGR01181 dTDP_gluc_dehyt dTDP 84.4 1.2 2.7E-05 40.4 4.0 24 46-69 8-33 (317)
290 TIGR01133 murG undecaprenyldip 84.3 1.4 3.1E-05 40.8 4.5 38 20-71 1-38 (348)
291 COG3320 Putative dehydrogenase 84.0 2.7 5.9E-05 41.2 6.3 27 46-72 9-36 (382)
292 COG0702 Predicted nucleoside-d 83.5 1.6 3.5E-05 38.8 4.3 36 20-73 1-36 (275)
293 PRK02472 murD UDP-N-acetylmura 82.7 2 4.4E-05 42.0 5.0 34 17-69 3-36 (447)
294 PF00070 Pyr_redox: Pyridine n 82.6 2.4 5.3E-05 31.3 4.3 29 46-74 7-35 (80)
295 COG1090 Predicted nucleoside-d 82.5 1.6 3.4E-05 41.3 3.9 27 46-72 7-33 (297)
296 COG1089 Gmd GDP-D-mannose dehy 82.3 3.5 7.7E-05 39.3 6.1 37 19-73 2-38 (345)
297 PF02737 3HCDH_N: 3-hydroxyacy 82.3 1.5 3.3E-05 38.1 3.5 25 46-70 7-31 (180)
298 PRK14188 bifunctional 5,10-met 82.2 3.4 7.3E-05 39.2 6.1 46 6-69 144-190 (296)
299 PRK10084 dTDP-glucose 4,6 dehy 81.9 2.1 4.6E-05 40.1 4.7 30 21-68 2-31 (352)
300 PRK12320 hypothetical protein; 81.8 2.1 4.5E-05 45.3 4.9 32 21-70 2-33 (699)
301 KOG1200 Mitochondrial/plastidi 81.0 2.2 4.8E-05 38.7 4.1 38 17-72 12-49 (256)
302 PLN02260 probable rhamnose bio 80.8 2.8 6E-05 43.5 5.4 36 16-69 3-40 (668)
303 PRK14179 bifunctional 5,10-met 80.8 3.2 6.8E-05 39.2 5.3 46 6-69 144-190 (284)
304 KOG1371 UDP-glucose 4-epimeras 80.3 1.9 4.1E-05 41.5 3.7 33 19-69 2-34 (343)
305 COG1087 GalE UDP-glucose 4-epi 79.7 2.8 6E-05 40.1 4.5 33 20-70 1-33 (329)
306 TIGR02197 heptose_epim ADP-L-g 79.6 2.4 5.2E-05 38.7 4.1 25 46-70 7-32 (314)
307 PRK14982 acyl-ACP reductase; P 79.5 3.3 7.2E-05 40.0 5.1 36 16-69 152-189 (340)
308 PRK05865 hypothetical protein; 78.3 3.2 7E-05 44.9 5.0 33 20-70 1-33 (854)
309 PRK06849 hypothetical protein; 78.0 4.1 8.8E-05 39.3 5.3 35 18-70 3-37 (389)
310 PLN02970 serine racemase 77.5 9.3 0.0002 36.3 7.5 102 43-157 80-182 (328)
311 PRK07201 short chain dehydroge 76.9 3.3 7.2E-05 42.3 4.6 33 21-71 2-36 (657)
312 cd03785 GT1_MurG MurG is an N- 75.9 3.9 8.4E-05 37.9 4.4 38 21-72 1-38 (350)
313 COG0623 FabI Enoyl-[acyl-carri 75.7 17 0.00036 33.8 8.2 39 16-70 3-41 (259)
314 PRK14191 bifunctional 5,10-met 74.7 8.8 0.00019 36.3 6.4 46 6-69 143-189 (285)
315 PLN02996 fatty acyl-CoA reduct 74.0 4.5 9.7E-05 40.8 4.5 37 17-71 9-48 (491)
316 PRK12548 shikimate 5-dehydroge 73.8 6.3 0.00014 36.8 5.2 36 16-70 123-159 (289)
317 TIGR02853 spore_dpaA dipicolin 73.4 7.2 0.00016 36.6 5.5 37 15-70 147-183 (287)
318 cd00674 LysRS_core_class_I cat 72.5 13 0.00027 36.2 7.1 52 19-75 18-69 (353)
319 PF03807 F420_oxidored: NADP o 72.2 5.4 0.00012 30.1 3.7 24 46-69 7-33 (96)
320 PLN02503 fatty acyl-CoA reduct 72.1 5 0.00011 41.7 4.4 38 16-71 116-156 (605)
321 PF01210 NAD_Gly3P_dh_N: NAD-d 71.7 4.1 8.8E-05 34.4 3.1 25 46-70 7-31 (157)
322 PF03446 NAD_binding_2: NAD bi 71.4 5.4 0.00012 33.7 3.9 24 46-69 9-32 (163)
323 cd05212 NAD_bind_m-THF_DH_Cycl 71.3 17 0.00036 30.6 6.7 49 4-70 12-61 (140)
324 PRK01438 murD UDP-N-acetylmura 70.8 8.7 0.00019 38.1 5.7 37 15-70 12-48 (480)
325 KOG1429 dTDP-glucose 4-6-dehyd 70.5 8.1 0.00018 36.9 5.0 36 16-69 24-59 (350)
326 PRK07819 3-hydroxybutyryl-CoA 70.1 5.4 0.00012 37.2 3.9 34 37-70 4-37 (286)
327 PRK07334 threonine dehydratase 70.0 27 0.00059 34.1 8.9 102 44-157 77-178 (403)
328 cd02070 corrinoid_protein_B12- 69.8 35 0.00076 30.0 8.8 20 49-68 97-117 (201)
329 PRK00258 aroE shikimate 5-dehy 68.5 11 0.00024 34.9 5.5 36 16-70 120-156 (278)
330 PRK06815 hypothetical protein; 67.8 22 0.00047 33.6 7.5 31 40-71 71-101 (317)
331 KOG1478 3-keto sterol reductas 67.7 16 0.00034 34.6 6.2 28 18-63 2-29 (341)
332 cd01562 Thr-dehyd Threonine de 67.0 23 0.00051 32.7 7.5 28 44-71 71-98 (304)
333 TIGR01915 npdG NADPH-dependent 66.8 6.9 0.00015 34.8 3.7 25 46-70 9-33 (219)
334 PRK00726 murG undecaprenyldiph 66.8 9.3 0.0002 35.8 4.8 39 20-72 2-40 (357)
335 PRK07048 serine/threonine dehy 66.7 20 0.00043 33.8 7.0 28 44-71 78-105 (321)
336 KOG1372 GDP-mannose 4,6 dehydr 66.7 6.8 0.00015 36.8 3.6 29 45-73 36-64 (376)
337 PLN02520 bifunctional 3-dehydr 66.6 10 0.00023 38.6 5.4 35 16-69 376-410 (529)
338 PF02882 THF_DHG_CYH_C: Tetrah 66.3 15 0.00033 31.7 5.6 47 6-70 22-69 (160)
339 PRK05562 precorrin-2 dehydroge 65.8 12 0.00026 34.1 5.0 37 15-70 21-57 (223)
340 COG1648 CysG Siroheme synthase 65.8 12 0.00025 33.7 5.0 36 16-70 9-44 (210)
341 cd01065 NAD_bind_Shikimate_DH 65.7 16 0.00034 30.0 5.4 35 16-69 16-51 (155)
342 TIGR00467 lysS_arch lysyl-tRNA 65.4 17 0.00037 37.1 6.6 52 20-76 18-69 (515)
343 PF01488 Shikimate_DH: Shikima 65.4 15 0.00032 30.2 5.2 35 16-69 9-44 (135)
344 PRK07066 3-hydroxybutyryl-CoA 64.7 8.1 0.00018 37.0 3.9 33 37-69 6-38 (321)
345 COG2072 TrkA Predicted flavopr 64.4 11 0.00023 37.5 4.9 41 14-73 170-210 (443)
346 PRK10792 bifunctional 5,10-met 64.2 17 0.00037 34.3 5.9 47 6-70 145-192 (285)
347 PRK06382 threonine dehydratase 63.4 38 0.00082 33.2 8.4 101 44-157 79-180 (406)
348 PRK06115 dihydrolipoamide dehy 63.3 19 0.00042 35.7 6.5 57 19-75 137-211 (466)
349 COG0373 HemA Glutamyl-tRNA red 63.1 36 0.00079 33.9 8.2 35 16-69 175-209 (414)
350 PRK06129 3-hydroxyacyl-CoA deh 63.1 8.1 0.00018 36.2 3.6 25 46-70 10-34 (308)
351 PRK14192 bifunctional 5,10-met 63.0 15 0.00033 34.4 5.4 37 15-69 155-191 (283)
352 COG2085 Predicted dinucleotide 62.5 8.7 0.00019 34.8 3.4 166 45-241 8-183 (211)
353 PRK14176 bifunctional 5,10-met 62.3 20 0.00043 34.0 5.9 47 6-70 150-197 (287)
354 TIGR00715 precor6x_red precorr 62.2 13 0.00027 34.5 4.6 69 181-253 152-233 (256)
355 PRK06444 prephenate dehydrogen 62.2 7.2 0.00016 34.7 2.9 21 45-65 8-28 (197)
356 KOG1610 Corticosteroid 11-beta 62.1 12 0.00025 36.0 4.4 35 16-68 26-60 (322)
357 PRK04308 murD UDP-N-acetylmura 62.0 14 0.0003 36.3 5.2 35 17-70 3-37 (445)
358 PRK00750 lysK lysyl-tRNA synth 61.8 20 0.00043 36.5 6.3 50 21-75 24-73 (510)
359 PRK14183 bifunctional 5,10-met 61.8 19 0.0004 34.0 5.7 46 6-69 143-189 (281)
360 COG0569 TrkA K+ transport syst 61.8 7.9 0.00017 34.9 3.1 26 47-72 9-34 (225)
361 PF03853 YjeF_N: YjeF-related 61.5 30 0.00065 29.6 6.6 38 16-68 22-59 (169)
362 PRK11199 tyrA bifunctional cho 61.3 12 0.00026 36.3 4.5 25 46-70 107-131 (374)
363 PRK09754 phenylpropionate diox 61.3 16 0.00034 35.3 5.3 26 47-72 153-178 (396)
364 PRK12831 putative oxidoreducta 61.2 15 0.00032 36.6 5.3 36 17-71 279-314 (464)
365 KOG2304 3-hydroxyacyl-CoA dehy 60.9 6.2 0.00014 36.6 2.3 36 37-72 10-45 (298)
366 PRK14618 NAD(P)H-dependent gly 60.4 9.8 0.00021 35.8 3.6 25 46-70 12-36 (328)
367 PRK07846 mycothione reductase; 60.2 23 0.00049 35.1 6.3 58 18-75 128-203 (451)
368 PRK14619 NAD(P)H-dependent gly 60.0 11 0.00024 35.3 3.9 26 46-71 12-37 (308)
369 PRK06370 mercuric reductase; V 59.2 19 0.00042 35.5 5.6 30 46-75 179-208 (463)
370 cd06448 L-Ser-dehyd Serine deh 59.0 32 0.0007 32.5 6.9 34 38-71 51-84 (316)
371 PRK07530 3-hydroxybutyryl-CoA 58.8 11 0.00024 34.8 3.7 25 46-70 12-36 (292)
372 TIGR00507 aroE shikimate 5-deh 58.8 19 0.00042 33.0 5.2 34 17-69 115-148 (270)
373 PF02558 ApbA: Ketopantoate re 58.6 13 0.00029 30.4 3.7 26 46-71 6-31 (151)
374 PRK09260 3-hydroxybutyryl-CoA 58.5 9.7 0.00021 35.2 3.2 25 46-70 9-33 (288)
375 COG0707 MurG UDP-N-acetylgluco 58.4 14 0.00031 35.8 4.5 35 20-68 1-36 (357)
376 PRK07476 eutB threonine dehydr 58.1 25 0.00054 33.2 6.0 27 45-71 74-100 (322)
377 PRK14180 bifunctional 5,10-met 58.0 25 0.00053 33.2 5.8 47 6-70 144-191 (282)
378 PRK11259 solA N-methyltryptoph 57.9 15 0.00033 34.5 4.5 24 47-70 12-35 (376)
379 TIGR01127 ilvA_1Cterm threonin 57.9 51 0.0011 31.7 8.2 31 41-71 51-81 (380)
380 PRK08293 3-hydroxybutyryl-CoA 57.9 11 0.00023 34.9 3.4 25 46-70 11-35 (287)
381 TIGR02991 ectoine_eutB ectoine 57.7 60 0.0013 30.7 8.5 31 41-71 70-100 (317)
382 KOG1430 C-3 sterol dehydrogena 57.7 17 0.00038 35.5 4.9 35 18-70 3-39 (361)
383 PRK08638 threonine dehydratase 57.7 34 0.00073 32.7 6.8 31 41-71 78-108 (333)
384 cd01132 F1_ATPase_alpha F1 ATP 57.6 23 0.00051 33.2 5.5 45 18-70 125-169 (274)
385 PRK06467 dihydrolipoamide dehy 57.5 20 0.00044 35.6 5.5 59 17-75 135-211 (471)
386 PRK13512 coenzyme A disulfide 57.0 23 0.0005 34.8 5.7 28 47-74 157-184 (438)
387 PLN02545 3-hydroxybutyryl-CoA 56.8 12 0.00027 34.6 3.6 25 46-70 12-36 (295)
388 PF00670 AdoHcyase_NAD: S-aden 56.5 39 0.00084 29.3 6.3 45 4-69 10-54 (162)
389 PF01113 DapB_N: Dihydrodipico 56.5 20 0.00043 29.1 4.4 31 39-69 2-33 (124)
390 PRK09288 purT phosphoribosylgl 56.4 26 0.00056 33.6 5.9 35 17-70 10-44 (395)
391 cd06449 ACCD Aminocyclopropane 56.2 22 0.00047 33.3 5.2 27 45-71 61-87 (307)
392 cd01563 Thr-synth_1 Threonine 56.2 32 0.00069 32.3 6.3 29 44-72 76-104 (324)
393 PRK06522 2-dehydropantoate 2-r 56.0 12 0.00026 34.3 3.3 25 46-70 8-32 (304)
394 PRK06416 dihydrolipoamide dehy 56.0 23 0.00051 34.8 5.6 59 17-75 133-209 (462)
395 PRK14172 bifunctional 5,10-met 55.8 29 0.00062 32.7 5.8 47 6-70 144-191 (278)
396 cd00640 Trp-synth-beta_II Tryp 55.7 1E+02 0.0022 27.5 9.3 28 45-72 57-84 (244)
397 TIGR01136 cysKM cysteine synth 55.6 71 0.0015 29.7 8.5 28 44-71 64-91 (299)
398 TIGR01316 gltA glutamate synth 55.5 21 0.00046 35.3 5.2 36 17-71 270-305 (449)
399 PRK14173 bifunctional 5,10-met 55.4 29 0.00063 32.8 5.8 47 6-70 141-188 (287)
400 PRK14031 glutamate dehydrogena 55.4 35 0.00077 34.3 6.7 36 15-69 224-259 (444)
401 TIGR01421 gluta_reduc_1 glutat 55.3 23 0.0005 35.0 5.4 28 46-73 174-201 (450)
402 PRK14189 bifunctional 5,10-met 55.3 29 0.00063 32.8 5.8 47 6-70 144-191 (285)
403 PRK06567 putative bifunctional 55.3 21 0.00045 39.5 5.4 36 16-70 380-415 (1028)
404 PRK00711 D-amino acid dehydrog 55.0 20 0.00043 34.4 4.8 24 47-70 9-32 (416)
405 PRK12428 3-alpha-hydroxysteroi 54.9 11 0.00023 33.5 2.8 19 53-71 1-19 (241)
406 PRK05249 soluble pyridine nucl 54.9 26 0.00056 34.4 5.7 57 17-75 136-212 (461)
407 cd01561 CBS_like CBS_like: Thi 54.5 85 0.0019 28.9 8.8 28 44-71 59-86 (291)
408 PRK14170 bifunctional 5,10-met 54.5 30 0.00064 32.7 5.7 47 6-70 143-190 (284)
409 TIGR01275 ACC_deam_rel pyridox 54.4 21 0.00044 33.4 4.7 27 45-71 65-91 (311)
410 PRK12409 D-amino acid dehydrog 54.3 20 0.00043 34.4 4.7 24 47-70 10-33 (410)
411 PRK04965 NADH:flavorubredoxin 54.1 26 0.00057 33.4 5.5 27 47-73 150-176 (377)
412 PRK00094 gpsA NAD(P)H-dependen 54.1 15 0.00032 34.0 3.7 25 46-70 9-33 (325)
413 COG0031 CysK Cysteine synthase 53.8 13 0.00028 35.4 3.2 26 44-69 68-93 (300)
414 PRK09496 trkA potassium transp 53.7 37 0.0008 33.1 6.6 45 6-70 219-263 (453)
415 TIGR02279 PaaC-3OHAcCoADH 3-hy 53.6 14 0.0003 37.5 3.6 25 46-70 13-37 (503)
416 PRK08198 threonine dehydratase 53.6 67 0.0014 31.3 8.3 102 44-157 76-177 (404)
417 PRK14187 bifunctional 5,10-met 53.3 32 0.00069 32.7 5.7 47 6-70 146-193 (294)
418 PRK03910 D-cysteine desulfhydr 53.3 23 0.0005 33.6 4.9 27 45-71 73-99 (331)
419 PRK14186 bifunctional 5,10-met 52.9 34 0.00073 32.6 5.9 47 6-70 144-191 (297)
420 TIGR01505 tartro_sem_red 2-hyd 52.9 15 0.00032 33.9 3.5 25 46-70 7-31 (291)
421 PRK14190 bifunctional 5,10-met 52.8 34 0.00075 32.3 5.9 46 6-69 144-190 (284)
422 PRK14166 bifunctional 5,10-met 52.8 33 0.00072 32.4 5.7 47 6-70 143-190 (282)
423 PRK14171 bifunctional 5,10-met 52.6 32 0.0007 32.6 5.6 47 6-70 145-192 (288)
424 PRK14620 NAD(P)H-dependent gly 52.6 16 0.00035 34.3 3.7 25 46-70 8-32 (326)
425 PRK14169 bifunctional 5,10-met 52.5 35 0.00076 32.2 5.9 47 6-70 142-189 (282)
426 PRK14177 bifunctional 5,10-met 52.3 34 0.00073 32.4 5.7 47 6-70 145-192 (284)
427 PRK05808 3-hydroxybutyryl-CoA 52.3 14 0.00031 33.9 3.2 24 46-69 11-34 (282)
428 TIGR03452 mycothione_red mycot 51.6 32 0.00069 34.0 5.8 57 18-74 131-205 (452)
429 PRK08655 prephenate dehydrogen 51.6 24 0.00053 35.0 4.9 25 46-70 9-33 (437)
430 PRK08229 2-dehydropantoate 2-r 51.5 14 0.0003 34.7 3.1 25 46-70 10-34 (341)
431 PRK07845 flavoprotein disulfid 51.1 32 0.00069 34.1 5.7 59 17-75 138-214 (466)
432 cd01135 V_A-ATPase_B V/A-type 51.1 32 0.00069 32.4 5.3 45 18-70 129-174 (276)
433 PRK08246 threonine dehydratase 51.0 71 0.0015 30.1 7.8 33 39-71 69-101 (310)
434 COG1250 FadB 3-hydroxyacyl-CoA 50.5 13 0.00027 35.6 2.6 26 45-70 10-35 (307)
435 TIGR02053 MerA mercuric reduct 50.3 29 0.00063 34.2 5.2 30 46-75 174-203 (463)
436 cd01134 V_A-ATPase_A V/A-type 50.0 17 0.00036 35.7 3.3 25 46-70 238-262 (369)
437 PRK04192 V-type ATP synthase s 50.0 15 0.00033 38.1 3.2 27 45-71 307-333 (586)
438 PLN02516 methylenetetrahydrofo 49.9 39 0.00086 32.2 5.8 47 6-70 153-200 (299)
439 PRK06035 3-hydroxyacyl-CoA deh 49.8 21 0.00046 33.0 4.0 30 41-70 6-35 (291)
440 TIGR01041 ATP_syn_B_arch ATP s 49.7 29 0.00063 35.0 5.1 45 18-70 201-246 (458)
441 PRK07251 pyridine nucleotide-d 49.7 34 0.00075 33.4 5.6 30 46-75 165-194 (438)
442 TIGR01692 HIBADH 3-hydroxyisob 49.6 18 0.0004 33.4 3.5 25 46-70 4-28 (288)
443 PHA03392 egt ecdysteroid UDP-g 49.4 37 0.00081 34.4 5.9 25 45-69 33-57 (507)
444 PRK12266 glpD glycerol-3-phosp 49.4 23 0.00051 35.6 4.5 24 47-70 15-38 (508)
445 PRK08010 pyridine nucleotide-d 49.3 38 0.00082 33.1 5.8 30 46-75 166-195 (441)
446 PTZ00153 lipoamide dehydrogena 49.2 30 0.00066 36.4 5.4 30 46-75 320-349 (659)
447 PRK12390 1-aminocyclopropane-1 49.0 28 0.00061 33.0 4.8 26 45-70 76-101 (337)
448 TIGR02437 FadB fatty oxidation 49.0 18 0.00039 38.3 3.7 35 36-70 311-345 (714)
449 PRK05976 dihydrolipoamide dehy 49.0 35 0.00076 33.8 5.6 57 17-75 141-217 (472)
450 COG0143 MetG Methionyl-tRNA sy 48.4 32 0.00069 35.6 5.3 50 19-72 4-53 (558)
451 PRK14569 D-alanyl-alanine synt 48.4 33 0.00071 31.9 5.0 39 20-69 5-43 (296)
452 PRK10637 cysG siroheme synthas 48.4 34 0.00074 34.1 5.4 36 16-70 9-44 (457)
453 TIGR01043 ATP_syn_A_arch ATP s 48.3 17 0.00037 37.7 3.3 26 45-70 302-327 (578)
454 PF01266 DAO: FAD dependent ox 48.3 21 0.00045 32.6 3.6 25 46-70 7-31 (358)
455 TIGR01139 cysK cysteine syntha 48.2 88 0.0019 29.0 7.9 28 44-71 63-90 (298)
456 TIGR02824 quinone_pig3 putativ 48.1 62 0.0013 28.9 6.7 36 17-70 138-173 (325)
457 PLN02507 glutathione reductase 47.6 37 0.00081 34.1 5.6 28 46-73 211-238 (499)
458 PRK07417 arogenate dehydrogena 47.5 22 0.00047 32.8 3.6 25 46-70 8-32 (279)
459 cd08295 double_bond_reductase_ 47.5 37 0.0008 31.5 5.2 36 17-70 150-185 (338)
460 PRK07531 bifunctional 3-hydrox 47.5 18 0.00039 36.4 3.3 26 45-70 11-36 (495)
461 PRK06327 dihydrolipoamide dehy 47.4 38 0.00083 33.6 5.6 59 17-75 144-220 (475)
462 PRK15461 NADH-dependent gamma- 47.4 21 0.00046 33.2 3.6 25 46-70 9-33 (296)
463 PTZ00058 glutathione reductase 47.3 34 0.00073 35.2 5.3 57 17-75 201-274 (561)
464 cd03113 CTGs CTP synthetase (C 47.3 35 0.00076 31.8 4.9 37 20-68 1-37 (255)
465 PRK00676 hemA glutamyl-tRNA re 47.2 60 0.0013 31.5 6.7 37 16-71 171-208 (338)
466 CHL00059 atpA ATP synthase CF1 47.2 29 0.00062 35.3 4.6 45 18-70 197-241 (485)
467 PRK06249 2-dehydropantoate 2-r 47.2 21 0.00047 33.4 3.6 25 46-70 13-37 (313)
468 PRK11101 glpA sn-glycerol-3-ph 47.2 26 0.00056 35.7 4.4 24 47-70 15-38 (546)
469 PRK10717 cysteine synthase A; 47.1 1.1E+02 0.0024 28.8 8.5 28 44-71 70-97 (330)
470 TIGR03385 CoA_CoA_reduc CoA-di 46.8 52 0.0011 31.9 6.4 26 47-72 146-171 (427)
471 cd01133 F1-ATPase_beta F1 ATP 46.7 37 0.0008 31.9 5.0 45 18-70 126-171 (274)
472 PRK14182 bifunctional 5,10-met 46.7 48 0.001 31.3 5.8 47 6-70 143-190 (282)
473 PF13450 NAD_binding_8: NAD(P) 46.6 30 0.00065 25.0 3.5 27 46-72 4-30 (68)
474 PRK08526 threonine dehydratase 46.4 1.2E+02 0.0025 30.0 8.7 28 44-71 74-101 (403)
475 PF02826 2-Hacid_dh_C: D-isome 46.3 56 0.0012 28.0 5.8 37 15-70 32-68 (178)
476 PF13579 Glyco_trans_4_4: Glyc 46.2 27 0.00059 27.4 3.6 25 47-71 4-28 (160)
477 PRK14178 bifunctional 5,10-met 46.2 45 0.00098 31.4 5.5 46 6-69 138-184 (279)
478 PRK11749 dihydropyrimidine deh 46.1 37 0.00079 33.5 5.2 35 18-71 272-307 (457)
479 cd08259 Zn_ADH5 Alcohol dehydr 46.1 41 0.00089 30.5 5.2 36 17-70 161-196 (332)
480 PRK13343 F0F1 ATP synthase sub 46.0 35 0.00077 34.8 5.1 45 18-70 218-262 (502)
481 TIGR01274 ACC_deam 1-aminocycl 46.0 33 0.00072 32.6 4.7 26 45-70 75-100 (337)
482 PRK09310 aroDE bifunctional 3- 45.7 40 0.00087 33.9 5.5 35 16-69 329-363 (477)
483 PRK06292 dihydrolipoamide dehy 45.6 41 0.00088 33.0 5.4 59 17-75 129-206 (460)
484 PRK13369 glycerol-3-phosphate 45.6 28 0.00061 34.9 4.3 24 47-70 15-38 (502)
485 PRK04346 tryptophan synthase s 45.6 28 0.0006 34.4 4.2 34 39-72 108-141 (397)
486 PRK06130 3-hydroxybutyryl-CoA 45.5 28 0.00061 32.3 4.1 26 45-70 11-36 (311)
487 cd08253 zeta_crystallin Zeta-c 45.4 43 0.00094 29.8 5.2 36 17-70 143-178 (325)
488 PRK07818 dihydrolipoamide dehy 45.2 43 0.00094 33.0 5.6 59 17-75 134-209 (466)
489 PRK08268 3-hydroxy-acyl-CoA de 45.2 24 0.00052 35.8 3.8 32 39-70 8-39 (507)
490 PTZ00075 Adenosylhomocysteinas 45.1 44 0.00095 33.9 5.5 36 15-69 250-285 (476)
491 PRK06475 salicylate hydroxylas 45.0 31 0.00066 33.2 4.4 26 47-72 11-36 (400)
492 TIGR00962 atpA proton transloc 44.9 35 0.00077 34.8 4.9 45 18-70 217-261 (501)
493 cd01079 NAD_bind_m-THF_DH NAD 44.8 53 0.0011 29.5 5.5 40 16-73 59-98 (197)
494 PRK05868 hypothetical protein; 44.7 32 0.0007 32.9 4.5 26 47-72 10-35 (372)
495 COG0528 PyrH Uridylate kinase 44.7 47 0.001 30.7 5.2 41 17-70 122-162 (238)
496 PRK09281 F0F1 ATP synthase sub 44.6 37 0.0008 34.7 5.0 45 18-70 218-262 (502)
497 PRK04196 V-type ATP synthase s 44.4 41 0.00089 33.9 5.3 45 18-70 203-248 (460)
498 TIGR02825 B4_12hDH leukotriene 44.2 45 0.00097 30.7 5.2 36 17-70 137-172 (325)
499 TIGR01424 gluta_reduc_2 glutat 44.1 47 0.001 32.6 5.6 29 46-74 174-202 (446)
500 PRK01747 mnmC bifunctional tRN 44.1 31 0.00067 35.9 4.5 25 46-70 268-292 (662)
No 1
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=100.00 E-value=7.7e-65 Score=454.10 Aligned_cols=280 Identities=46% Similarity=0.681 Sum_probs=244.5
Q ss_pred HHHhhccCCCC-CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCccc
Q 022985 7 CVAFFKCDYEG-TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAF 85 (289)
Q Consensus 7 ~~~~~~~~~~~-~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~ 85 (289)
++.|++....+ ++|.|+||||||.+|++.|+||||+|||+|.+|++.||+|++.||.|+|+||..|+.||+|++|.+.|
T Consensus 18 ~~eFi~~q~s~~~rrIVlVTSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl~R~~Sl~Py~R~f~~~~~ 97 (302)
T KOG2728|consen 18 IEEFIKLQASLQGRRIVLVTSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFLYRERSLFPYTRHFPGQTW 97 (302)
T ss_pred HHHHHHHHhhccCceEEEEecCCeEeecccCceEeeeccCcCCccchhHHHHHhCCceEEEEeeccccccccccCCCchh
Confidence 56666533233 45699999999999999999999999999999999999999999999999999999999999998888
Q ss_pred chhhhccCCcc---EEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCC
Q 022985 86 LECFEVTEESA---VQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSD 162 (289)
Q Consensus 86 ~~~~~~~~~~~---v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsD 162 (289)
+++++..+... |.-.+...+-+.+++..|+.....+++|+++|+|+.||+++|++|+++|+.+++.-|+++||||||
T Consensus 98 ~~~l~~~g~~~~~~i~~~e~~~~vf~~~~~~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae~Ln~~~sramfYLAAAVSD 177 (302)
T KOG2728|consen 98 FLFLRPSGSALSGLIEKEENALPVFAEALEKYKYAEKAGTLLYVPFTTLADYLWLLRAIAEALNPLGSRAMFYLAAAVSD 177 (302)
T ss_pred hhhhccCCcccccceecCchhhHHHHHHHHHHHHHHhhCcEEEEecchHHHHHHHHHHHHHHhccccchHHHHHHHHhcc
Confidence 88888876432 222222223345666666655578999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCcCCCCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCCCC
Q 022985 163 FYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLSR 242 (289)
Q Consensus 163 f~v~~~~~~~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~~~ 242 (289)
|++|++++++|||+|+++.+.|+|.++||+|+.++..|.|++++|+||||||+..||.+|++.|++|++++||||.|+++
T Consensus 178 FyVP~~~mpeHKIqSg~~~l~i~l~~VPK~L~~Lv~~WaP~AfiiSFKLETDesiLi~KAr~AL~kY~HqlVIAN~LsTR 257 (302)
T KOG2728|consen 178 FYVPESEMPEHKIQSGSGPLQITLKPVPKMLSPLVSDWAPKAFIISFKLETDESILINKARKALEKYKHQLVIANLLSTR 257 (302)
T ss_pred cccChhhcchhhcccCCCCceEEeccchHHHHHHHHhhCcceEEEEEEecCChHHHHHHHHHHHHHhCceeeeeehhhhc
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEeCCCeeeeeCCCCCChHHHHHHHHHHHHHHHHHHHhhcC
Q 022985 243 KEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVDRHSVYIKDSN 288 (289)
Q Consensus 243 ~~~v~li~~~~~~~~~~~~k~~k~~ia~~I~~~i~~~~~~~~~~~~ 288 (289)
+.+|++|+++-...+ ..++ ...-|++.|++.+.++|.+||+++.
T Consensus 258 k~~V~fVt~~~~~~~-~l~~-~~~~IE~~ii~~vv~rH~~~I~~a~ 301 (302)
T KOG2728|consen 258 KSRVVFVTKNIVQWL-ELDK-APGAIEDSIIKLVVSRHKEFIDEAQ 301 (302)
T ss_pred ceeEEEEecCcceee-eccc-ccchhHHHHHHHHHHHHHHHHHhhc
Confidence 999999997654322 2222 1246999999999999999999875
No 2
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=100.00 E-value=1.1e-54 Score=381.56 Aligned_cols=177 Identities=32% Similarity=0.464 Sum_probs=132.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCcc
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESA 96 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~ 96 (289)
|+||+||||||||+|||| |||||||+|||+||++||++|+++||+|++|+|+.++.| | .+ ...
T Consensus 1 l~gk~vlITaG~T~E~iD--~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~-----p--~~--------~~~ 63 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPID--PVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP-----P--PG--------VKV 63 (185)
T ss_dssp -TT-EEEEEESB-EEESS--SSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TT--------EEE
T ss_pred CCCCEEEEECCCccccCC--CceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc-----c--cc--------ceE
Confidence 579999999999999999 999999999999999999999999999999999976532 2 11 123
Q ss_pred EEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCCCCCcccccCCCcC
Q 022985 97 VQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQ 176 (289)
Q Consensus 97 v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~ 176 (289)
+++.+ +++|.+++.+ .++++|++|||||||||++ +...++||+
T Consensus 64 i~v~s--a~em~~~~~~---------------------------------~~~~~Di~I~aAAVsDf~p--~~~~~~KIk 106 (185)
T PF04127_consen 64 IRVES--AEEMLEAVKE---------------------------------LLPSADIIIMAAAVSDFRP--EEPAEGKIK 106 (185)
T ss_dssp EE-SS--HHHHHHHHHH---------------------------------HGGGGSEEEE-SB--SEEE--SCHHSS-G-
T ss_pred EEecc--hhhhhhhhcc---------------------------------ccCcceeEEEecchhheee--hhccccccc
Confidence 44443 4444444332 1466799999999999995 667899999
Q ss_pred C-CCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCCC-------CCcEEEE
Q 022985 177 S-GSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS-------RKEQVVV 248 (289)
Q Consensus 177 s-~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~~-------~~~~v~l 248 (289)
| +.+.++|+|++|||||+.|++.|.|++++|||||||+ +++++|++||++|+||+||||+++. +.|+++|
T Consensus 107 K~~~~~l~l~L~~~pkIL~~l~~~~~~~~~lVGFkaEt~--~l~~~A~~kl~~k~~D~IVaN~~~~~~~gfg~~~n~~~i 184 (185)
T PF04127_consen 107 KSSGDELTLELKPTPKILAELRKNKKPNQFLVGFKAETE--ELIENAKEKLERKGADLIVANDLSQRGSGFGSDTNEVTI 184 (185)
T ss_dssp --TT-CEEEEEEE-GGHGCCHHHHCSTTTEEEEEEEESC--HHHHHHHHHHHHCT-SEEEEEEGCCCTSSSSSSEEEEEE
T ss_pred cccCcceEEEEEeChHHHHHHHhcccCCcEEEEEEecCC--cHHHHHHHHhHhhCCCEEEEeCCCcCCCCcCCCceEEEE
Confidence 6 4568999999999999999878999999999999996 5999999999999999999999997 4688887
Q ss_pred E
Q 022985 249 V 249 (289)
Q Consensus 249 i 249 (289)
|
T Consensus 185 i 185 (185)
T PF04127_consen 185 I 185 (185)
T ss_dssp -
T ss_pred C
Confidence 5
No 3
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=100.00 E-value=4.7e-53 Score=415.38 Aligned_cols=219 Identities=24% Similarity=0.340 Sum_probs=181.5
Q ss_pred hHHHHHHHhhccC--CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCC
Q 022985 2 YLFANCVAFFKCD--YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSS 79 (289)
Q Consensus 2 ~~~~~~~~~~~~~--~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~ 79 (289)
+|++.+.++|... +++.||+||||+|||+|||| |||||||+|||+||++||++|+.+||+|+||+|+.++.|
T Consensus 237 ~I~~~v~~~~~~~~~~~l~gkkvLITaGpT~E~ID--pVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~---- 310 (475)
T PRK13982 237 EIAAAAEALLRPPQPKPLAGRRVLITAGPTHEPID--PVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLAD---- 310 (475)
T ss_pred HHHHHHHHHHhhccccccCCCEEEEecCCccccCC--cceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCC----
Confidence 5788888888632 57999999999999999999 999999999999999999999999999999999887532
Q ss_pred CCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhh
Q 022985 80 LPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAA 159 (289)
Q Consensus 80 ~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAA 159 (289)
| . ++..+.|++ +++|.+++.+. . ++|++|||||
T Consensus 311 -p--~--------~v~~i~V~t--a~eM~~av~~~---------------------------------~-~~Di~I~aAA 343 (475)
T PRK13982 311 -P--Q--------GVKVIHVES--ARQMLAAVEAA---------------------------------L-PADIAIFAAA 343 (475)
T ss_pred -C--C--------CceEEEecC--HHHHHHHHHhh---------------------------------C-CCCEEEEecc
Confidence 2 1 123456655 66776665432 2 3699999999
Q ss_pred cCCCCCCcccccCCCcCCCC-CCeeEEEEcccchhHHhhccc-CCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEe
Q 022985 160 VSDFYVPWKSMAEHKIQSGS-GPLDMQLLQVPKMLSVLRKEW-APMAFCISFKLETDAEILLEKADMARKKYGMHAVVAN 237 (289)
Q Consensus 160 VsDf~v~~~~~~~~KI~s~~-~~l~l~L~~~Pkil~~i~~~~-~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN 237 (289)
||||++ ....++||||+. +.++|+|++|||||+.|++.+ .+.+++|||||||++ ++++|++||++|+||+||||
T Consensus 344 VaDyrp--~~~~~~KiKk~~~~~~~L~L~~nPDIL~~l~~~~~~~~~~lVGFaaEt~~--l~~~A~~KL~~K~~D~IvaN 419 (475)
T PRK13982 344 VADWRV--ATEGGQKLKKGAAGPPPLQLVENPDILATISKLAENRPPLVIGFAAETEH--LIDNARAKLARKGCDWIVAN 419 (475)
T ss_pred ccceee--ccccccccCcCCCCCceeeeeeCcHHHHHHhhhcccCCCEEEEEccCchh--HHHHHHHHHHHcCCCEEEEc
Confidence 999995 567899999853 457899999999999998632 224699999999975 99999999999999999999
Q ss_pred cCCC-------CCcEEEEEeCCCe----eeeeCCCCCChHHHHHHHHHHHHHHH
Q 022985 238 ELLS-------RKEQVVVVTNNGK----IPVYRDKTSSDSDVEKPLTKLLVDRH 280 (289)
Q Consensus 238 ~l~~-------~~~~v~li~~~~~----~~~~~~~k~~k~~ia~~I~~~i~~~~ 280 (289)
+++. +.|+++|++++|. +.++.++ |.++|+.|++++.+.+
T Consensus 420 ~v~~~~~gfg~d~n~v~ii~~~g~~~~~~~~~~~s---K~~iA~~Il~~i~~~~ 470 (475)
T PRK13982 420 DVSPATGVMGGDRNTVHLLSRDGDAEKVESWPVMT---KDEVATALVARIASTF 470 (475)
T ss_pred cCCcCCCCcCCCccEEEEEECCCCccceeEcCCCC---HHHHHHHHHHHHHHHh
Confidence 9963 6899999999983 3566555 5999999999997643
No 4
>PRK09620 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-51 Score=368.91 Aligned_cols=209 Identities=24% Similarity=0.281 Sum_probs=163.5
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCcc
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESA 96 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~ 96 (289)
+.||+||||||||+|||| |||||||+|||+||.++|++|+++||+|++++|+.+..|.. +|. ....
T Consensus 1 l~gk~vlITaG~T~E~iD--~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~--~~~----------~~~~ 66 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWD--QVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND--INN----------QLEL 66 (229)
T ss_pred CCCCEEEEeCCCccCCcC--CeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc--cCC----------ceeE
Confidence 479999999999999999 99999999999999999999999999999999986633321 110 0111
Q ss_pred EEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCCCCCccccc-----
Q 022985 97 VQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMA----- 171 (289)
Q Consensus 97 v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf~v~~~~~~----- 171 (289)
+.+.+ ..+|..+ ++.+ ++ ...+|++||+||||||+|+ ...
T Consensus 67 ~~V~s--~~d~~~~---------------------------l~~~---~~-~~~~D~VIH~AAvsD~~~~--~~~~~~~~ 111 (229)
T PRK09620 67 HPFEG--IIDLQDK---------------------------MKSI---IT-HEKVDAVIMAAAGSDWVVD--KICDQEGN 111 (229)
T ss_pred EEEec--HHHHHHH---------------------------HHHH---hc-ccCCCEEEECccccceecc--cccccccc
Confidence 22322 2233222 2221 21 1357999999999999973 332
Q ss_pred ----CCCcCCCCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCc--hHHHHHHHHHHHhcCCcEEEEecCCC---C
Q 022985 172 ----EHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDA--EILLEKADMARKKYGMHAVVANELLS---R 242 (289)
Q Consensus 172 ----~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~--e~li~~A~~kL~~k~~D~VvaN~l~~---~ 242 (289)
++||+|+ +.++|+|++|||||+.+++ |.|++++|||||||+. ++|+++|++||++|+|||||||+++. .
T Consensus 112 ~~~~~~Ki~~~-~~~~l~L~~~pdIl~~l~~-~~~~~~~vGFkaEt~~~~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~ 189 (229)
T PRK09620 112 VLDMNGKISSD-IAPIIHFQKAPKVLKQIKQ-WDPETVLVGFKLESDVNEEELFERAKNRMEEAKASVMIANSPHSLYSR 189 (229)
T ss_pred cccccCCCcCC-CCCeEEEEECcHHHHHHHh-hCCCCEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEECCcccccCC
Confidence 3499885 5689999999999999985 6688999999999985 68999999999999999999999963 4
Q ss_pred CcEEEEEeCCCeeeeeCCCCCChHHHHHHHHHHHHHHH
Q 022985 243 KEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVDRH 280 (289)
Q Consensus 243 ~~~v~li~~~~~~~~~~~~k~~k~~ia~~I~~~i~~~~ 280 (289)
.++++||+++|.. .+.++ |.++|+.|++++.++-
T Consensus 190 ~~~~~ii~~~~~~-~~~~~---K~~iA~~i~~~i~~~~ 223 (229)
T PRK09620 190 GAMHYVIGQDGKG-QLCNG---KDETAKEIVKRLEVLC 223 (229)
T ss_pred CcEEEEEeCCCcc-ccCCC---HHHHHHHHHHHHHHhh
Confidence 4689999999863 34444 6999999999998653
No 5
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=100.00 E-value=4e-49 Score=382.12 Aligned_cols=218 Identities=25% Similarity=0.338 Sum_probs=179.1
Q ss_pred hHHHHHHHhhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCC
Q 022985 2 YLFANCVAFFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLP 81 (289)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p 81 (289)
+|+..+.+.|. +++++||+||||+|||+|||| |||||||+|||+||.++|++|+++||+|++++|+.+..| |
T Consensus 172 ~I~~~~~~~~~-~~~l~gk~vlITgG~T~E~ID--~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~-----~ 243 (399)
T PRK05579 172 EIVAAAERALS-PKDLAGKRVLITAGPTREPID--PVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT-----P 243 (399)
T ss_pred HHHHHHHHHhh-hcccCCCEEEEeCCCcccccc--ceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC-----C
Confidence 57778888886 467999999999999999999 999999999999999999999999999999999865321 2
Q ss_pred CcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcC
Q 022985 82 DDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVS 161 (289)
Q Consensus 82 ~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVs 161 (289)
. . ...+.+.+ .++|.+++. +.++..|++||+|||+
T Consensus 244 ~--~--------~~~~dv~~--~~~~~~~v~---------------------------------~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 244 A--G--------VKRIDVES--AQEMLDAVL---------------------------------AALPQADIFIMAAAVA 278 (399)
T ss_pred C--C--------cEEEccCC--HHHHHHHHH---------------------------------HhcCCCCEEEEccccc
Confidence 1 0 11233332 344443322 1257789999999999
Q ss_pred CCCCCcccccCCCcCCCCCCeeEEEEcccchhHHhhcccCCCe-eEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCC
Q 022985 162 DFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMA-FCISFKLETDAEILLEKADMARKKYGMHAVVANELL 240 (289)
Q Consensus 162 Df~v~~~~~~~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~-~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~ 240 (289)
||++ ....++||||+.+.++|+|++|||||+.+++.+ |++ ++|||||||++ ++++|++||++|+||+||||+++
T Consensus 279 d~~~--~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~-~~~~~~VGFaaEt~~--~~~~A~~kl~~k~~D~ivaN~i~ 353 (399)
T PRK05579 279 DYRP--ATVAEGKIKKGEGELTLELVPNPDILAEVAALK-DKRPFVVGFAAETGD--VLEYARAKLKRKGLDLIVANDVS 353 (399)
T ss_pred cccc--ccccccCccCCCCCceEEEEeCcHHHHHHHhcc-CCCCEEEEEccCCch--HHHHHHHHHHHcCCeEEEEecCC
Confidence 9995 678899999975569999999999999999755 444 89999999987 89999999999999999999994
Q ss_pred ------CCCcEEEEEeCCCee-eeeCCCCCChHHHHHHHHHHHHHHH
Q 022985 241 ------SRKEQVVVVTNNGKI-PVYRDKTSSDSDVEKPLTKLLVDRH 280 (289)
Q Consensus 241 ------~~~~~v~li~~~~~~-~~~~~~k~~k~~ia~~I~~~i~~~~ 280 (289)
.+.|+++|++++|.. .++.++ |.+||++|++++.+++
T Consensus 354 ~~~~fg~~~n~~~ii~~~~~~~~~~~~~---K~~iA~~i~~~i~~~~ 397 (399)
T PRK05579 354 AGGGFGSDDNEVTLIWSDGGEVKLPLMS---KLELARRLLDEIAERL 397 (399)
T ss_pred cCCCcCCCceEEEEEECCCcEEEcCCCC---HHHHHHHHHHHHHHHh
Confidence 368999999998853 676666 5999999999997654
No 6
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=100.00 E-value=2e-48 Score=376.11 Aligned_cols=218 Identities=24% Similarity=0.303 Sum_probs=179.5
Q ss_pred hHHHHHHHhhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCC
Q 022985 2 YLFANCVAFFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLP 81 (289)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p 81 (289)
+|+..+.+.|....++.||+||||+|||+|||| |||||||+|||+||.++|++|+.+||+|++++|+.+..| |
T Consensus 168 ~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD--~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~-----~ 240 (390)
T TIGR00521 168 TIVKAAEREFSPKEDLEGKRVLITAGPTREPID--PVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT-----P 240 (390)
T ss_pred HHHHHHHHHHhhccccCCceEEEecCCccCCCC--ceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC-----C
Confidence 567777777763356999999999999999999 999999999999999999999999999999999876432 2
Q ss_pred CcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcC
Q 022985 82 DDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVS 161 (289)
Q Consensus 82 ~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVs 161 (289)
. + ...+.+++ .++|.+++. +. ..+..|++|++||||
T Consensus 241 ~--~--------~~~~~v~~--~~~~~~~~~--------------------------~~------~~~~~D~~i~~Aavs 276 (390)
T TIGR00521 241 P--G--------VKSIKVST--AEEMLEAAL--------------------------NE------LAKDFDIFISAAAVA 276 (390)
T ss_pred C--C--------cEEEEecc--HHHHHHHHH--------------------------Hh------hcccCCEEEEccccc
Confidence 1 1 11234433 344433221 11 146789999999999
Q ss_pred CCCCCcccccCCCcCCCCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCCC
Q 022985 162 DFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS 241 (289)
Q Consensus 162 Df~v~~~~~~~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~~ 241 (289)
||++ ....++||+|.++.++|+|++|||||+.+++.| |++++|||||||+.+ ++++|++||++|+||+||||+++.
T Consensus 277 d~~~--~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~-~~~~lvgF~aEt~~~-l~~~A~~kl~~k~~D~ivaN~i~~ 352 (390)
T TIGR00521 277 DFKP--KTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK-KHQVIVGFKAETNDD-LIKYAKEKLKKKNLDMIVANDVSQ 352 (390)
T ss_pred cccc--cccccccccccCCceeEEEEeCcHHHHHHHhhC-CCcEEEEEEcCCCcH-HHHHHHHHHHHcCCCEEEEccCCc
Confidence 9996 456789999965679999999999999999755 578999999999866 999999999999999999999975
Q ss_pred -----CCcEEEEEeCCCeeeeeCCCCCChHHHHHHHHHHHH
Q 022985 242 -----RKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLV 277 (289)
Q Consensus 242 -----~~~~v~li~~~~~~~~~~~~k~~k~~ia~~I~~~i~ 277 (289)
++|+++||+++|...++.++ |.++|++|+++++
T Consensus 353 ~~fg~~~n~~~li~~~~~~~~~~~~---K~~iA~~i~~~~~ 390 (390)
T TIGR00521 353 RGFGSDENEVYIFSKHGHKELPLMS---KLEVAERILDEIK 390 (390)
T ss_pred cccCCCCcEEEEEECCCeEEeCCCC---HHHHHHHHHHHhC
Confidence 68999999999977777666 5999999999873
No 7
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=100.00 E-value=4.1e-48 Score=349.99 Aligned_cols=203 Identities=24% Similarity=0.340 Sum_probs=162.6
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEE
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQV 99 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v 99 (289)
++||||||||+|||| |||||||+|||+||.++|++|+++||+|++++|+....|.. + . +...+.+
T Consensus 1 ~~vliT~G~T~e~iD--~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~---~--~--------~v~~i~v 65 (229)
T PRK06732 1 MKILITSGGTTEPID--SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEP---H--P--------NLSIIEI 65 (229)
T ss_pred CEEEEcCCCcccccC--CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCC---C--C--------CeEEEEE
Confidence 489999999999999 99999999999999999999999999999999876543311 1 0 0112223
Q ss_pred eCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCCCCCcc-----------
Q 022985 100 CQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWK----------- 168 (289)
Q Consensus 100 ~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf~v~~~----------- 168 (289)
.+ .++|.+++.+ ..+..|++||+||++||.+...
T Consensus 66 ~s--~~~m~~~l~~---------------------------------~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~ 110 (229)
T PRK06732 66 EN--VDDLLETLEP---------------------------------LVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDN 110 (229)
T ss_pred ec--HHHHHHHHHH---------------------------------HhcCCCEEEeCCccCCceehhhhhhhhhhhhhh
Confidence 22 2333332211 1356899999999999985210
Q ss_pred -------cccCCCcCCCCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCc--hHHHHHHHHHHHhcCCcEEEEecC
Q 022985 169 -------SMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDA--EILLEKADMARKKYGMHAVVANEL 239 (289)
Q Consensus 169 -------~~~~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~--e~li~~A~~kL~~k~~D~VvaN~l 239 (289)
..+++||+|+.+.++|+|++|||||+.+++ |.|++++|||||||+. ++|+++|++||++|+||+||||++
T Consensus 111 v~~~~~~~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~vvaN~~ 189 (229)
T PRK06732 111 LNEFLTKQNTEAKISSASDYQVLFLKKTPKVISYVKK-WNPNITLVGFKLLVNVSKEELIKVARASLIKNQADYILANDL 189 (229)
T ss_pred hhhhhccccccCCccCCCCceEEEEEEChHHHHHHHh-hCCCcEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 124899999866799999999999999985 6788999999999984 679999999999999999999999
Q ss_pred CC---CCcEEEEEeCCCeeeeeCCCCCChHHHHHHHHHHHHH
Q 022985 240 LS---RKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVD 278 (289)
Q Consensus 240 ~~---~~~~v~li~~~~~~~~~~~~k~~k~~ia~~I~~~i~~ 278 (289)
+. +.|+++|++++|.. +.++ |.+||+.|++++.+
T Consensus 190 ~~~~~~~~~~~~i~~~~~~--~~~~---K~~~a~~i~~~~~~ 226 (229)
T PRK06732 190 TDISADQHKALLVSKNEVY--TAQT---KEEIADLLLERIEK 226 (229)
T ss_pred cccCCCCcEEEEEeCCCee--eCCC---HHHHHHHHHHHHHh
Confidence 75 78999999999853 4444 59999999999875
No 8
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=100.00 E-value=7.8e-46 Score=334.70 Aligned_cols=201 Identities=25% Similarity=0.365 Sum_probs=159.5
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEe
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVC 100 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~ 100 (289)
+||||||||+|||| |||||||+|||.+|.++|++|+++||+|++++++.+..|. + .. .+.+.
T Consensus 1 ~vliT~G~T~e~iD--~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~~----~-~~-----------~~Dv~ 62 (227)
T TIGR02114 1 KILVTSGGTSEPID--SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALKPE----P-HP-----------NLSIR 62 (227)
T ss_pred CEEEccCCccCCCC--CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcccc----c-CC-----------cceee
Confidence 59999999999999 9999999999999999999999999999999875443221 0 00 01221
Q ss_pred CccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCCCCCcccc----------
Q 022985 101 QPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSM---------- 170 (289)
Q Consensus 101 ~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf~v~~~~~---------- 170 (289)
. .++..+|++.+ .+.++..|++||+||++||.+- ...
T Consensus 63 d-----------------------------~~s~~~l~~~v---~~~~g~iDiLVnnAgv~d~~~~-~~~s~e~~~~~~~ 109 (227)
T TIGR02114 63 E-----------------------------IETTKDLLITL---KELVQEHDILIHSMAVSDYTPV-YMTDLEQVQASDN 109 (227)
T ss_pred c-----------------------------HHHHHHHHHHH---HHHcCCCCEEEECCEeccccch-hhCCHHHHhhhcc
Confidence 1 11112222222 2335778999999999999852 222
Q ss_pred ---------cCCCcCCCCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCc--hHHHHHHHHHHHhcCCcEEEEecC
Q 022985 171 ---------AEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDA--EILLEKADMARKKYGMHAVVANEL 239 (289)
Q Consensus 171 ---------~~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~--e~li~~A~~kL~~k~~D~VvaN~l 239 (289)
.++||+|+.+.++|+|++|||||+.+++ |.|++++||||||++. ++|+++|++||++|+||+||||++
T Consensus 110 ~~~~~~~~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~-~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~ivaN~~ 188 (227)
T TIGR02114 110 LNEFLSKQNHEAKISSTSEYQVLFLKKTPKVISLVKE-WNPQIHLVGFKLLVNVTQEELVKVARASLIKNQADFILANDL 188 (227)
T ss_pred hhhhhccccccCCcccCCCceeEEEEEChHHHHHHHh-hCCCcEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEcch
Confidence 3799999766799999999999999995 6688899999999874 689999999999999999999999
Q ss_pred C---CCCcEEEEEeCCCeeeeeCCCCCChHHHHHHHHHHHHH
Q 022985 240 L---SRKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVD 278 (289)
Q Consensus 240 ~---~~~~~v~li~~~~~~~~~~~~k~~k~~ia~~I~~~i~~ 278 (289)
+ .+.|+++|+++++. ++.++ |.+||+.|++++.+
T Consensus 189 ~~~~~~~~~~~li~~~~~--~~~~~---k~~ia~~i~~~~~~ 225 (227)
T TIGR02114 189 TDISADQHKALLIEKNQV--QTAQT---KEEIAELLYEKVQK 225 (227)
T ss_pred hhcCCCCceEEEEeCCCe--eecCC---HHHHHHHHHHHHHh
Confidence 5 47899999999983 44444 59999999999864
No 9
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=100.00 E-value=4.3e-40 Score=318.34 Aligned_cols=219 Identities=22% Similarity=0.344 Sum_probs=186.3
Q ss_pred hHHHHHHHhhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCC
Q 022985 2 YLFANCVAFFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLP 81 (289)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p 81 (289)
+|+..+.+++..+ ++.||+||||+|||+|+|| |||||||+|||+||++||++++++|++|++++|+.++.+ |
T Consensus 167 ~Iv~~~~~~~~~~-~l~gk~Vlit~G~t~E~id--pvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~~~~~~-----p 238 (392)
T COG0452 167 EIVEAALALLKTP-DLKGKKVLITAGPTREYID--PVRFISNRSSGKMGFALAAAAKRRGASVTLVSGPTSLKI-----P 238 (392)
T ss_pred HHHHHHHhhcccc-cccCcEEEecCCCCccCCc--cceeeeccccccccHHHHHHHHHcCCceEEecCCCcCCC-----C
Confidence 4788888888744 8999999999999999999 999999999999999999999999999999999776532 2
Q ss_pred CcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcC
Q 022985 82 DDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVS 161 (289)
Q Consensus 82 ~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVs 161 (289)
.++ ..+.+.+ +++|.+++. .....+|++|++|||+
T Consensus 239 --~~v--------~~v~v~s--a~em~~av~---------------------------------~~~~~~d~~i~~aAva 273 (392)
T COG0452 239 --AGV--------EVVKVES--AEEMLNAVL---------------------------------EAALPADIFISAAAVA 273 (392)
T ss_pred --Ccc--------eeeeeee--HHHHHHHHH---------------------------------hcccccCEEEEecccc
Confidence 221 2345555 566766542 1246789999999999
Q ss_pred CCCCCcccccCCCcCCCCCCeeEEEEcccchhHHhhcccCCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCC-
Q 022985 162 DFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELL- 240 (289)
Q Consensus 162 Df~v~~~~~~~~KI~s~~~~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~- 240 (289)
||++ ...+++||+|+.+.+.|+|.+|||||..++..+.+..++|||++|++. ++++|+++|+++++|+|++|+.+
T Consensus 274 D~~~--~~~~~~Kikk~~~~~~l~l~~n~dil~~~~~~~~~~~~~Vgfaaet~~--~~~~a~~kl~~k~~D~i~aNdv~~ 349 (392)
T COG0452 274 DYRP--KWVAEAKIKKQGEPFKLELVPNPDILASVARDYPKKNILVGFAAETGD--IVEYAREKLERKNLDLIVANDVSE 349 (392)
T ss_pred cccc--ccccccceeecCCcceEEeccChhHHHHHHhhccCCCeEEEEeccchH--HHHHHHHhhhhcCCCeEEeccccc
Confidence 9995 678899999976679999999999999999765433389999999998 99999999999999999999998
Q ss_pred ----CCCcEEEEEeCCCe-eeeeCCCCCChHHHHHHHHHHHHHHH
Q 022985 241 ----SRKEQVVVVTNNGK-IPVYRDKTSSDSDVEKPLTKLLVDRH 280 (289)
Q Consensus 241 ----~~~~~v~li~~~~~-~~~~~~~k~~k~~ia~~I~~~i~~~~ 280 (289)
+++|++++++++|. ..++.++| .++|+.|++.+.+++
T Consensus 350 ~~fg~d~n~~~~~~~d~~~~~~~~~~k---~~~a~~i~~~i~~~~ 391 (392)
T COG0452 350 IGFGSDDNEVRIIDKDGEDVELPEMSK---EELAERILDEIAELL 391 (392)
T ss_pred cCCCCCccceEEecCCCCeeeccccCH---HHHHHHHHHHHHHhh
Confidence 47899999999887 67887775 999999999998764
No 10
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00011 Score=69.02 Aligned_cols=37 Identities=30% Similarity=0.350 Sum_probs=33.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||++|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 11 ~l~gk~~lITGa-----------------s~G-IG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 11 DLSGKRAVVTGA-----------------SDG-LGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred ccCCCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999 666 9999999999999999998874
No 11
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00022 Score=64.28 Aligned_cols=37 Identities=43% Similarity=0.492 Sum_probs=33.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||.+|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 5 ~l~~k~~lItGa-----------------s~g-iG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 5 QLEGRVAVVTGG-----------------SSG-IGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred ccCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCeEEEEeCC
Confidence 578999999999 555 9999999999999999988874
No 12
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00036 Score=62.55 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=32.6
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||++|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 6 ~~~~k~vlVtGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 6 DLHGKRALITGA-----------------STG-IGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred cCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEcCC
Confidence 367899999999 555 9999999999999999988764
No 13
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.58 E-value=0.00027 Score=63.81 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++||+||||+| |+| .|.++|+.|+++|+.|++++++
T Consensus 5 ~l~~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 5 EMKGKTLVISGG-----------------TRG-IGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred ccCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEcCC
Confidence 578999999998 666 9999999999999999988753
No 14
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.55 E-value=0.0004 Score=62.44 Aligned_cols=43 Identities=28% Similarity=0.306 Sum_probs=35.2
Q ss_pred hhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 10 FFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 10 ~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+.....+.+|+||||+| |+| .|.++|+.|++.|+.|+++.++
T Consensus 6 ~~~~~~~l~~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 6 FSMDFFSLDGKVAIVTGG-----------------NTG-LGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred hccccccCCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 443334578999999999 555 9999999999999999998865
No 15
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00047 Score=61.97 Aligned_cols=37 Identities=30% Similarity=0.285 Sum_probs=32.6
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 4 ~l~~k~vlVtGa-----------------s~g-IG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGA-----------------AQG-IGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999998 555 9999999999999999998864
No 16
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00051 Score=63.08 Aligned_cols=37 Identities=27% Similarity=0.276 Sum_probs=32.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||.+|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 3 ~~~~k~vlVTGa-----------------s~g-IG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGG-----------------ASG-IGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999999 666 9999999999999999987754
No 17
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00064 Score=61.05 Aligned_cols=37 Identities=30% Similarity=0.293 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|.+|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 5 ~~~~k~~lVtG~-----------------s~g-IG~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 5 DLDGQVAFVTGA-----------------GSG-IGQRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred CCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999998 555 9999999999999999998864
No 18
>PRK06194 hypothetical protein; Provisional
Probab=97.48 E-value=0.00067 Score=61.87 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=32.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| |+ -.|.++|+.++++|+.|+++.+.
T Consensus 3 ~~~~k~vlVtGa-----------------sg-gIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGA-----------------AS-GFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCC-----------------cc-HHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999999 54 49999999999999999988764
No 19
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00065 Score=60.83 Aligned_cols=36 Identities=33% Similarity=0.393 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 4 ~~~k~~lItGa-----------------s~g-iG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 4 LNGKVAIITGA-----------------SSG-IGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999998 555 9999999999999999998864
No 20
>PRK08589 short chain dehydrogenase; Validated
Probab=97.47 E-value=0.00057 Score=62.30 Aligned_cols=37 Identities=30% Similarity=0.290 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||++|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 3 ~l~~k~vlItGa-----------------s~g-IG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGA-----------------STG-IGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCc
Confidence 367899999999 555 9999999999999999999864
No 21
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.47 E-value=0.00071 Score=61.15 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=32.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|++|||+| |+| .|.++|+.++.+|+.|+++.+.
T Consensus 7 ~~~~k~~lItGa-----------------~~~-iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 7 SLKGKIALITGA-----------------SYG-IGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred CCCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCeEEEEeCC
Confidence 478899999999 454 9999999999999999888653
No 22
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00076 Score=60.22 Aligned_cols=37 Identities=35% Similarity=0.405 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|.||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 5 ~l~~k~vlItGa-----------------s~g-IG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 5 DLTGKIALVTGA-----------------SRG-IGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred ccCCCEEEEECC-----------------CcH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999998 555 9999999999999999999864
No 23
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.46 E-value=0.00036 Score=65.48 Aligned_cols=95 Identities=23% Similarity=0.236 Sum_probs=61.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCc
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEES 95 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~ 95 (289)
.+.||.|+||+= ||| .|.++|.+++++|+.+.++.|...- +
T Consensus 9 ~~~~kvVvITGA-----------------SsG-IG~~lA~~la~~G~~l~lvar~~rr------l--------------- 49 (282)
T KOG1205|consen 9 RLAGKVVLITGA-----------------SSG-IGEALAYELAKRGAKLVLVARRARR------L--------------- 49 (282)
T ss_pred HhCCCEEEEeCC-----------------CcH-HHHHHHHHHHhCCCceEEeehhhhh------H---------------
Confidence 478999999987 999 9999999999999999999985321 0
Q ss_pred cEEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCC
Q 022985 96 AVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSD 162 (289)
Q Consensus 96 ~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsD 162 (289)
+.+ .++.++.....+++.+++|-.++ .+..+.+......++..|++|++|..+=
T Consensus 50 ---------~~v---~~~l~~~~~~~~v~~~~~Dvs~~-~~~~~~~~~~~~~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 50 ---------ERV---AEELRKLGSLEKVLVLQLDVSDE-ESVKKFVEWAIRHFGRVDVLVNNAGISL 103 (282)
T ss_pred ---------HHH---HHHHHHhCCcCccEEEeCccCCH-HHHHHHHHHHHHhcCCCCEEEecCcccc
Confidence 111 11111111111344444442222 2333333334456899999999999987
No 24
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.45 E-value=0.00039 Score=63.80 Aligned_cols=38 Identities=34% Similarity=0.429 Sum_probs=33.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
..+|.||||+- ||| .|.++|+.|.+.||.|++..|...
T Consensus 4 ~~~kv~lITGA-----------------SSG-iG~A~A~~l~~~G~~vvl~aRR~d 41 (246)
T COG4221 4 LKGKVALITGA-----------------SSG-IGEATARALAEAGAKVVLAARREE 41 (246)
T ss_pred CCCcEEEEecC-----------------cch-HHHHHHHHHHHCCCeEEEEeccHH
Confidence 45688999988 999 999999999999999999998643
No 25
>PRK06398 aldose dehydrogenase; Validated
Probab=97.44 E-value=0.00031 Score=63.60 Aligned_cols=37 Identities=35% Similarity=0.361 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 3 ~l~gk~vlItGa-----------------s~g-IG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 3 GLKDKVAIVTGG-----------------SQG-IGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCeEEEEeCC
Confidence 478899999999 555 9999999999999999988764
No 26
>PRK06128 oxidoreductase; Provisional
Probab=97.43 E-value=0.00072 Score=62.68 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=31.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+.||+||||+| |+| .|.++|+.|+++|++|++...
T Consensus 52 ~l~~k~vlITGa-----------------s~g-IG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 52 RLQGRKALITGA-----------------DSG-IGRATAIAFAREGADIALNYL 87 (300)
T ss_pred ccCCCEEEEecC-----------------CCc-HHHHHHHHHHHcCCEEEEEeC
Confidence 467899999999 555 999999999999999988765
No 27
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.42 E-value=0.00059 Score=61.47 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++.||++|||+| |+| .|.++|+.|+++|+.|+++.+
T Consensus 5 ~l~~k~~lItGa-----------------s~g-IG~aia~~l~~~G~~vv~~~~ 40 (251)
T PRK12481 5 DLNGKVAIITGC-----------------NTG-LGQGMAIGLAKAGADIVGVGV 40 (251)
T ss_pred ccCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEecC
Confidence 467899999999 666 999999999999999988765
No 28
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00084 Score=59.62 Aligned_cols=36 Identities=28% Similarity=0.288 Sum_probs=32.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| ||..|..+|+.|+++|++|+++.++
T Consensus 3 ~~~k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 3 LAGRVAIVTGA------------------GSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCCcEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEecCC
Confidence 67899999999 4669999999999999999999875
No 29
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.42 E-value=0.00095 Score=59.79 Aligned_cols=37 Identities=38% Similarity=0.274 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||+||||+| ||..|.++|+.|+++|++|+++.++
T Consensus 7 ~~~~k~vlItGa------------------~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 7 DLTGRRALVTGS------------------SQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CCCCCEEEEECC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 478899999998 4569999999999999999988764
No 30
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.41 E-value=0.00069 Score=61.07 Aligned_cols=36 Identities=36% Similarity=0.415 Sum_probs=32.2
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 4 ~~~k~vlVtGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGG-----------------GSG-IGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999 666 9999999999999999988764
No 31
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.41 E-value=0.00075 Score=61.12 Aligned_cols=39 Identities=8% Similarity=0.019 Sum_probs=33.9
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccch-hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.||.+|||+| || +-.|.++|+.|+++|+.|++..++
T Consensus 6 ~~~~~k~~lItGa-----------------s~g~GIG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGI-----------------ANEQSIAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECC-----------------CCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 3478999999999 76 369999999999999999988764
No 32
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.001 Score=58.79 Aligned_cols=37 Identities=35% Similarity=0.361 Sum_probs=32.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+++|+||||+| + |..|.++|+.++++|++|+++.++
T Consensus 2 ~~~~~~vlItG~-----------------~-~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 2 TLSNKVAIVTGA-----------------S-RGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCCCEEEEeCC-----------------C-chHHHHHHHHHHHCCCEEEEecCC
Confidence 367899999999 4 559999999999999999888764
No 33
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00085 Score=63.80 Aligned_cols=37 Identities=27% Similarity=0.356 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 4 ~l~~k~vlITGA-----------------s~G-IG~aia~~la~~G~~Vvl~~R~ 40 (330)
T PRK06139 4 PLHGAVVVITGA-----------------SSG-IGQATAEAFARRGARLVLAARD 40 (330)
T ss_pred CCCCCEEEEcCC-----------------CCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 467899999999 666 9999999999999999998864
No 34
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00078 Score=60.35 Aligned_cols=37 Identities=27% Similarity=0.287 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||++|||+| | |..|.++|+.|+++|+.|+++.++
T Consensus 4 ~l~~~~ilItGa-----------------s-ggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 4 NLKDKVVIVTGG-----------------A-SGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CcCCCEEEEeCC-----------------C-ChHHHHHHHHHHHcCCcEEEEcCC
Confidence 578999999998 4 459999999999999999998764
No 35
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00059 Score=63.29 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=32.6
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 13 ~~~~k~vlItGa-----------------s~g-IG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGA-----------------NTG-LGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCC-----------------CCc-HHHHHHHHHHHCCCEEEEEeCC
Confidence 578899999998 555 9999999999999999988764
No 36
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00059 Score=63.23 Aligned_cols=38 Identities=21% Similarity=0.212 Sum_probs=33.4
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++.||+||||+| |+| .|.++|+.++++|+.|+++.++
T Consensus 5 ~~l~gk~vlItGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~ 42 (296)
T PRK05872 5 TSLAGKVVVVTGA-----------------ARG-IGAELARRLHARGAKLALVDLE 42 (296)
T ss_pred CCCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999 666 9999999999999999988764
No 37
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.001 Score=63.14 Aligned_cols=37 Identities=30% Similarity=0.436 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 5 ~l~~k~vlITGa-----------------s~g-IG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGA-----------------SAG-VGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECC-----------------CCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 477899999999 555 9999999999999999998864
No 38
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00099 Score=60.24 Aligned_cols=37 Identities=27% Similarity=0.239 Sum_probs=32.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+++|.+|||+| + |..|.++|+.|+++|++|+++.++
T Consensus 7 ~~~~~~vlItGa-----------------s-ggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 7 RLDDQVAVVTGA-----------------G-RGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred cCCCCEEEEECC-----------------C-ChHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999998 4 459999999999999999998874
No 39
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.001 Score=59.77 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 3 ~~~~~~~lItG~-----------------s~g-iG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 3 KLTGKTALITGA-----------------LQG-IGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCEEEEecCC
Confidence 367899999999 544 9999999999999999998764
No 40
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0011 Score=61.53 Aligned_cols=38 Identities=32% Similarity=0.412 Sum_probs=33.1
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.+|+||||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 36 ~~~~~k~vlItGa-----------------sgg-IG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 36 VDLTGKRILLTGA-----------------SSG-IGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred cCCCCCEEEEeCC-----------------CcH-HHHHHHHHHHHCCCEEEEEECC
Confidence 3467899999999 555 9999999999999999999875
No 41
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.37 E-value=0.00083 Score=61.45 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=32.1
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccch-hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.||.+|||+| |+ +-.|.++|+.|++.|+.|++..++
T Consensus 4 l~~k~~lITGa-----------------s~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGV-----------------ASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCC-----------------CCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 67899999999 66 369999999999999999877653
No 42
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.36 E-value=0.0012 Score=59.36 Aligned_cols=37 Identities=30% Similarity=0.318 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 9 ~~~~k~ilItGa------------------~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 9 DLSGKTALVTGG------------------SRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred CcCCCEEEEECC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 367899999988 4559999999999999999988864
No 43
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.36 E-value=0.0012 Score=59.16 Aligned_cols=36 Identities=17% Similarity=0.129 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| |+| .|.++|+.|++.|++|+++.++
T Consensus 7 l~~k~~lItGa-----------------s~g-iG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 7 LAGKNILITGS-----------------AQG-IGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred CCCCEEEEECC-----------------CCh-HHHHHHHHHHHcCCEEEEEcCC
Confidence 67899999999 554 9999999999999999998764
No 44
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.36 E-value=0.00093 Score=60.72 Aligned_cols=36 Identities=11% Similarity=0.019 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++||.+|||+| | |+..|.++|+.|+++|+.|++.++
T Consensus 4 ~~~k~~lITGa-----------------~~~~GIG~a~a~~l~~~G~~v~~~~~ 40 (261)
T PRK08690 4 LQGKKILITGM-----------------ISERSIAYGIAKACREQGAELAFTYV 40 (261)
T ss_pred cCCcEEEEECC-----------------CCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 67899999998 3 455999999999999999998764
No 45
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.35 E-value=0.00087 Score=59.59 Aligned_cols=37 Identities=24% Similarity=0.234 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 2 ~~~~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGA-----------------NTG-LGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEcCc
Confidence 368999999999 555 9999999999999999998763
No 46
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.35 E-value=0.001 Score=61.03 Aligned_cols=38 Identities=8% Similarity=-0.012 Sum_probs=32.6
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..++||.+|||+| | |+..|.++|+.|+++|+.|+++++
T Consensus 6 ~~~~~k~~lItGa-----------------s~~~GIG~aia~~la~~G~~V~l~~r 44 (272)
T PRK08159 6 GLMAGKRGLILGV-----------------ANNRSIAWGIAKACRAAGAELAFTYQ 44 (272)
T ss_pred ccccCCEEEEECC-----------------CCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 3467899999999 6 456999999999999999988765
No 47
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0012 Score=60.91 Aligned_cols=36 Identities=25% Similarity=0.175 Sum_probs=32.2
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.||.+|||+| |+| .|.++|+.|++.|+.|+++.++
T Consensus 4 l~~k~~lITGa-----------------s~G-IG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGA-----------------GGG-IGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred cCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEeeCC
Confidence 67899999999 666 9999999999999999988754
No 48
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.35 E-value=0.00099 Score=60.42 Aligned_cols=36 Identities=19% Similarity=0.058 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.||.+|||+| | |+..|.++|+.|++.|++|++.++
T Consensus 4 l~~k~~lItGa-----------------s~~~GIG~aia~~la~~G~~v~~~~~ 40 (258)
T PRK07370 4 LTGKKALVTGI-----------------ANNRSIAWGIAQQLHAAGAELGITYL 40 (258)
T ss_pred cCCcEEEEeCC-----------------CCCCchHHHHHHHHHHCCCEEEEEec
Confidence 67899999998 5 355999999999999999988765
No 49
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.35 E-value=0.0011 Score=59.40 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| |+| .|.++|+.|+++|+.|+++.+.
T Consensus 5 ~~~~k~vlVtGa-----------------s~g-IG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGA-----------------AQG-IGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCc
Confidence 478899999999 544 9999999999999999988764
No 50
>PRK08643 acetoin reductase; Validated
Probab=97.34 E-value=0.0013 Score=58.93 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=30.0
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|++|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 2 ~k~~lItGa-----------------s~g-iG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGA-----------------GQG-IGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 679999988 555 9999999999999999998764
No 51
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0012 Score=61.82 Aligned_cols=38 Identities=24% Similarity=0.188 Sum_probs=34.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++.||.+|||+| |+| .|.++|+.|++.|+.|+++.++.
T Consensus 5 ~l~~k~~lITGg-----------------s~G-IG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 5 PLRGKVALVAGA-----------------TRG-AGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeccc
Confidence 478999999999 777 99999999999999999988753
No 52
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.34 E-value=0.0013 Score=58.68 Aligned_cols=37 Identities=22% Similarity=0.163 Sum_probs=32.2
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++||++|||+| ||..|..+|+.|+++|++|+++.++
T Consensus 4 ~~~~~~vlItGa------------------sg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 4 NLNGKTAVVTGA------------------ASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred cCCCCEEEEECC------------------CChHHHHHHHHHHHCCCeEEEEeCC
Confidence 367899999998 4569999999999999999988764
No 53
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.34 E-value=0.0014 Score=58.30 Aligned_cols=36 Identities=25% Similarity=0.158 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+||||+| ||..|.++|+.|+++|++|+++.++
T Consensus 2 ~~~~~vlItG~------------------sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 2 LKGKVALVTGA------------------ASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999 4569999999999999999999875
No 54
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.34 E-value=0.0011 Score=60.19 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchh-HHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSG-HRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG-~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+.||.+|||+| |+| -.|.++|+.|+++||.|++..+
T Consensus 5 ~~~~k~~lITGa-----------------s~~~GIG~a~a~~la~~G~~v~~~~r 42 (260)
T PRK06603 5 LLQGKKGLITGI-----------------ANNMSISWAIAQLAKKHGAELWFTYQ 42 (260)
T ss_pred ccCCcEEEEECC-----------------CCCcchHHHHHHHHHHcCCEEEEEeC
Confidence 467899999999 774 3999999999999999988765
No 55
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.32 E-value=0.0011 Score=55.25 Aligned_cols=93 Identities=20% Similarity=0.275 Sum_probs=56.0
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEE
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQV 99 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v 99 (289)
|.||||+| |+| +|.++|+.|+++|+.++++.+... +
T Consensus 1 k~~lItGa-----------------~~g-iG~~~a~~l~~~g~~~v~~~~r~~--~------------------------ 36 (167)
T PF00106_consen 1 KTVLITGA-----------------SSG-IGRALARALARRGARVVILTSRSE--D------------------------ 36 (167)
T ss_dssp EEEEEETT-----------------TSH-HHHHHHHHHHHTTTEEEEEEESSC--H------------------------
T ss_pred CEEEEECC-----------------CCH-HHHHHHHHHHhcCceEEEEeeecc--c------------------------
Confidence 68999999 666 999999999999886666665330 0
Q ss_pred eCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCC
Q 022985 100 CQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDF 163 (289)
Q Consensus 100 ~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf 163 (289)
.+...+..+++.....+-..+...+.+.++...+++.+. +..++.|++|++|.+...
T Consensus 37 ----~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~~~ld~li~~ag~~~~ 93 (167)
T PF00106_consen 37 ----SEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI---KRFGPLDILINNAGIFSD 93 (167)
T ss_dssp ----HHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH---HHHSSESEEEEECSCTTS
T ss_pred ----ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence 011111112222111122233334555555555555554 456789999999999763
No 56
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.31 E-value=0.0012 Score=60.65 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=32.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccch-hHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SS-G~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.++||.+|||+| |+ +-.|.++|+.|++.||.|++..+
T Consensus 4 ~l~~k~~lVTGa-----------------s~~~GIG~aiA~~la~~Ga~V~~~~r 41 (271)
T PRK06505 4 LMQGKRGLIMGV-----------------ANDHSIAWGIAKQLAAQGAELAFTYQ 41 (271)
T ss_pred ccCCCEEEEeCC-----------------CCCCcHHHHHHHHHHhCCCEEEEecC
Confidence 367899999999 65 23999999999999999998765
No 57
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0013 Score=58.88 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=32.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++||.+|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 3 ~~~k~~lVtGa-----------------s~G-IG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 3 IKSSIILITSA-----------------GSV-LGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred CCCeEEEEECC-----------------ccH-HHHHHHHHHHHCCCEEEEEcCC
Confidence 67899999999 777 8999999999999999998764
No 58
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.30 E-value=0.00072 Score=61.01 Aligned_cols=36 Identities=31% Similarity=0.376 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| |+| .|.++|+.|++.|++|+++.++
T Consensus 3 ~~~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 3 LKGEVVLVTGG-----------------ASG-LGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred cCCcEEEEECC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999998 555 9999999999999999988764
No 59
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.29 E-value=0.0016 Score=58.67 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++++|++|||+| | |..|.++|+.|+++|+.|++++++
T Consensus 4 ~~~~k~~lItGa-----------------~-~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGG-----------------S-TGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCC-----------------C-ChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999 4 459999999999999999887763
No 60
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0015 Score=58.05 Aligned_cols=36 Identities=31% Similarity=0.305 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| ||..|.++|++|+++|++|+++.++
T Consensus 4 ~~~k~vlItGa------------------sg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 4 FDDKVAIVTGA------------------AGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred cCCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999998 4559999999999999999999874
No 61
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.29 E-value=0.0016 Score=60.57 Aligned_cols=39 Identities=33% Similarity=0.497 Sum_probs=35.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
...++.+|||+. ||| .|.++|+.|+++|++|++++|..+
T Consensus 3 ~~~~~~~lITGA-----------------SsG-IG~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 3 PMKGKTALITGA-----------------SSG-IGAELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CCCCcEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCcHH
Confidence 467899999998 888 999999999999999999999643
No 62
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.29 E-value=0.00075 Score=60.91 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=33.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccch-hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||++|||+| |+ +..|.++|+.|+++|+.|++.+++
T Consensus 4 ~l~~k~~lItGa-----------------s~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 4 ILSGKKIVVMGV-----------------ANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred ccCCCEEEEeCC-----------------CCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 478999999999 63 459999999999999999988764
No 63
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.29 E-value=0.0016 Score=57.56 Aligned_cols=37 Identities=30% Similarity=0.194 Sum_probs=32.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| ||..|.++|++|+++|+.|+.+.++
T Consensus 3 ~~~~~~ilItGa------------------sg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 3 DLEGRVALVTGA------------------ARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCCEEEEcCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 367889999998 4669999999999999999999875
No 64
>PRK09242 tropinone reductase; Provisional
Probab=97.28 E-value=0.0011 Score=59.33 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||++|||+| |+ ..|.++|+.++++|++|+++.++
T Consensus 6 ~~~~k~~lItGa-----------------~~-gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 6 RLDGQTALITGA-----------------SK-GIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred ccCCCEEEEeCC-----------------Cc-hHHHHHHHHHHHcCCEEEEEeCC
Confidence 467999999988 44 49999999999999999999864
No 65
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.26 E-value=0.00083 Score=60.96 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||.+|||+| | |+-.|.++|+.|+++|+.|+++.+.
T Consensus 4 ~~~~k~~lItGa-----------------~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 4 SLEGKTYVVMGV-----------------ANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred ccCCCEEEEECC-----------------CCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 467899999999 6 3559999999999999999988753
No 66
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.002 Score=56.99 Aligned_cols=37 Identities=27% Similarity=0.179 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.++++|||+| ||..|.++|+.|+.+|++|+++.++
T Consensus 4 ~~~~~~vlVtG~------------------sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 4 SLQGKNALITGA------------------GRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred cCCCCEEEEEcC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 356789999988 4569999999999999999999875
No 67
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.26 E-value=0.0014 Score=60.39 Aligned_cols=37 Identities=8% Similarity=0.082 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.||.||||+| | ++-.|.++|+.|++.|+.|++..++
T Consensus 3 l~~k~~lItGa-----------------s~~~GIG~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 3 MKGKKGLIVGV-----------------ANNKSIAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred cCCcEEEEECC-----------------CCCCCHHHHHHHHHHHCCCEEEEEecC
Confidence 46899999999 6 2449999999999999999987654
No 68
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.25 E-value=0.002 Score=57.64 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=33.2
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.+|+||||+| | |..|.++|+.|+++|+.|+++.++
T Consensus 7 ~~~~~k~ilItGa-----------------s-~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 7 FSLAGQVALVTGS-----------------A-RGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred cCCCCCEEEEECC-----------------C-chHHHHHHHHHHHcCCeEEEEeCC
Confidence 4578999999999 4 459999999999999999999874
No 69
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.25 E-value=0.00088 Score=63.11 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=33.3
Q ss_pred CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 14 DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 14 ~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++..|+.||||+| ++| +|.++|.+|++||+.+.+.--+
T Consensus 33 ~k~v~g~~vLITGg-----------------g~G-lGr~ialefa~rg~~~vl~Din 71 (300)
T KOG1201|consen 33 LKSVSGEIVLITGG-----------------GSG-LGRLIALEFAKRGAKLVLWDIN 71 (300)
T ss_pred hhhccCCEEEEeCC-----------------Cch-HHHHHHHHHHHhCCeEEEEecc
Confidence 35678999999999 888 9999999999999966666543
No 70
>PRK06196 oxidoreductase; Provisional
Probab=97.25 E-value=0.0018 Score=60.37 Aligned_cols=38 Identities=37% Similarity=0.415 Sum_probs=33.4
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++.||+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 22 ~~l~~k~vlITGa-----------------sgg-IG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 22 HDLSGKTAIVTGG-----------------YSG-LGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999 555 9999999999999999998874
No 71
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0018 Score=58.90 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||.+|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 5 ~l~~k~~lItGa-----------------s~g-IG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 5 DLSGKLAFTTAS-----------------SKG-IGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred CCCCCEEEEeCC-----------------CCc-HHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999999 666 9999999999999999988764
No 72
>PRK12743 oxidoreductase; Provisional
Probab=97.23 E-value=0.0017 Score=58.34 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=29.4
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+|+||||+| |+| .|.++|+.|+++|+.|+++.+
T Consensus 2 ~k~vlItGa-----------------s~g-iG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 2 AQVAIVTAS-----------------DSG-IGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeC
Confidence 578999999 666 999999999999999988865
No 73
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.22 E-value=0.0024 Score=57.63 Aligned_cols=106 Identities=20% Similarity=0.110 Sum_probs=61.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccch-hHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEE 94 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~ 94 (289)
.+.||+||||+| |. |-.|.++|+.|+++|+.|++..+.... +... .+
T Consensus 3 ~l~~k~vlVtGa-----------------s~~~giG~~~a~~l~~~G~~vi~~~~~~~~-~~~~-~~------------- 50 (256)
T PRK12859 3 QLKNKVAVVTGV-----------------SRLDGIGAAICKELAEAGADIFFTYWTAYD-KEMP-WG------------- 50 (256)
T ss_pred CcCCcEEEEECC-----------------CCCCChHHHHHHHHHHCCCeEEEEeccccc-cccc-cc-------------
Confidence 478999999999 52 459999999999999999887542110 1000 00
Q ss_pred ccEEEeCccHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCC
Q 022985 95 SAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDF 163 (289)
Q Consensus 95 ~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf 163 (289)
.. ..+..+...+.......-..+...++..++...+++.+. +..++.|++|++|++...
T Consensus 51 ----~~---~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~---~~~g~id~li~~ag~~~~ 109 (256)
T PRK12859 51 ----VD---QDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT---EQLGYPHILVNNAAYSTN 109 (256)
T ss_pred ----cc---HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH---HHcCCCcEEEECCCCCCC
Confidence 00 111111111121111111233445666666666666553 345678999999997644
No 74
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.22 E-value=0.0019 Score=57.37 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=30.5
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++|.+|||+| | |..|.++|+.|+++|+.|+++.+.
T Consensus 1 ~~~k~~lVtG~-----------------s-~giG~~~a~~l~~~G~~vv~~~~~ 36 (246)
T PRK12938 1 MSQRIAYVTGG-----------------M-GGIGTSICQRLHKDGFKVVAGCGP 36 (246)
T ss_pred CCCCEEEEECC-----------------C-ChHHHHHHHHHHHcCCEEEEEcCC
Confidence 35789999998 4 459999999999999999887653
No 75
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.22 E-value=0.0016 Score=58.45 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=31.6
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.++.||.+|||+| ++| .|.++|++|++.|++|+.+..
T Consensus 6 ~~l~~k~~lItG~-----------------~~g-IG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 6 FSLEGKVAVVTGC-----------------DTG-LGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred cCCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEecC
Confidence 3578999999999 554 999999999999999987643
No 76
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.21 E-value=0.0019 Score=58.65 Aligned_cols=37 Identities=30% Similarity=0.367 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|.+|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 7 ~~~~k~vlVtGa-----------------s~g-iG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 7 SLKGKVAVITGG-----------------GGV-LGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred ccCCCEEEEeCC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999 554 9999999999999999988764
No 77
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0023 Score=56.52 Aligned_cols=36 Identities=33% Similarity=0.290 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.++++|||+| | |..|..+|+.|+++|++|+++.+.
T Consensus 4 ~~~~~ilItGa-----------------s-g~iG~~la~~l~~~g~~v~~~~~~ 39 (249)
T PRK12827 4 LDSRRVLITGG-----------------S-GGLGRAIAVRLAADGADVIVLDIH 39 (249)
T ss_pred cCCCEEEEECC-----------------C-ChHHHHHHHHHHHCCCeEEEEcCc
Confidence 56789999998 4 559999999999999999998863
No 78
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0021 Score=57.39 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+||||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 3 l~~k~vlItGa-----------------~~~-IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 3 LKGKVVVVSGV-----------------GPG-LGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred cCCCEEEEECC-----------------CCc-HHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999998 555 9999999999999999988763
No 79
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.20 E-value=0.0025 Score=56.02 Aligned_cols=36 Identities=33% Similarity=0.321 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++|+||||+| ||..|.++|+.|+++||.|+++.++
T Consensus 3 ~~~~~vlItG~------------------sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 3 LEGKVALVTGA------------------SRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999998 4669999999999999999888764
No 80
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0013 Score=59.44 Aligned_cols=37 Identities=30% Similarity=0.279 Sum_probs=32.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|++|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 3 ~~~~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 3 GLAGKVAIVTGG-----------------ATL-IGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred CCCCCEEEEECC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999998 554 9999999999999999998864
No 81
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0025 Score=56.37 Aligned_cols=37 Identities=30% Similarity=0.203 Sum_probs=31.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| +|..|.++|+.++++|++|+++.++
T Consensus 4 ~~~~~~vlItGa------------------~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGA------------------ARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCC------------------CChHHHHHHHHHHHcCCEEEEEeCC
Confidence 367899999998 4569999999999999999988653
No 82
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0024 Score=58.34 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.+.+|++|||+| |+| .|.++|+.++++|++|+++.++.
T Consensus 3 ~~~~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 3 SLSGKTLFITGA-----------------SRG-IGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred CCCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCEEEEEeccc
Confidence 357899999999 555 99999999999999999998753
No 83
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0014 Score=58.20 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=29.8
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|++|||+| | |..|.++|+.++++|+.|+++.++
T Consensus 2 ~k~vlItGa-----------------s-~giG~~la~~l~~~g~~v~~~~r~ 35 (248)
T PRK08251 2 RQKILITGA-----------------S-SGLGAGMAREFAAKGRDLALCARR 35 (248)
T ss_pred CCEEEEECC-----------------C-CHHHHHHHHHHHHcCCEEEEEeCC
Confidence 578999998 4 459999999999999999998764
No 84
>PRK05717 oxidoreductase; Validated
Probab=97.18 E-value=0.0017 Score=58.32 Aligned_cols=37 Identities=27% Similarity=0.259 Sum_probs=32.7
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..+.||+||||+| ||..|.++|+.++++|+.|+++.+
T Consensus 6 ~~~~~k~vlItG~------------------sg~IG~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 6 PGHNGRVALVTGA------------------ARGIGLGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred cccCCCEEEEeCC------------------cchHHHHHHHHHHHcCCEEEEEcC
Confidence 4578999999999 456999999999999999999865
No 85
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0024 Score=57.98 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| | |..|.++|+.|+.+|+.|+++.+.
T Consensus 6 ~~~~k~ilItGa-----------------s-ggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGG-----------------T-SGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECC-----------------C-chHHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999988 4 459999999999999999999874
No 86
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0024 Score=57.05 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| |+ ..|.++|+.|+++|++|+++.++
T Consensus 4 ~l~~k~ilItGa-----------------s~-~iG~~ia~~l~~~G~~v~~~~r~ 40 (253)
T PRK06172 4 TFSGKVALVTGG-----------------AA-GIGRATALAFAREGAKVVVADRD 40 (253)
T ss_pred CCCCCEEEEeCC-----------------Cc-hHHHHHHHHHHHcCCEEEEEeCC
Confidence 367899999998 44 49999999999999999999875
No 87
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.17 E-value=0.002 Score=60.08 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=32.5
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..+.||++|||+| |+| .|.++|++|+++|+.|+++.+
T Consensus 8 ~~l~~k~~lVTGa-----------------s~g-IG~~ia~~L~~~Ga~Vv~~~~ 44 (306)
T PRK07792 8 TDLSGKVAVVTGA-----------------AAG-LGRAEALGLARLGATVVVNDV 44 (306)
T ss_pred cCCCCCEEEEECC-----------------CCh-HHHHHHHHHHHCCCEEEEecC
Confidence 4578999999999 555 999999999999999998765
No 88
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0027 Score=56.96 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=32.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+++|+||||+| ++| .|.++|+.++++|+.|.++.+.
T Consensus 5 ~l~~k~vlItGa-----------------~~g-IG~~~a~~l~~~G~~vv~i~~~ 41 (257)
T PRK12744 5 SLKGKVVLIAGG-----------------AKN-LGGLIARDLAAQGAKAVAIHYN 41 (257)
T ss_pred CCCCcEEEEECC-----------------Cch-HHHHHHHHHHHCCCcEEEEecC
Confidence 467899999998 555 9999999999999998888754
No 89
>PRK07985 oxidoreductase; Provisional
Probab=97.12 E-value=0.0024 Score=59.26 Aligned_cols=36 Identities=33% Similarity=0.346 Sum_probs=31.2
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+.+|++|||+| |+| .|.++|+.|+++|++|+++.+
T Consensus 46 ~~~~k~vlITGa-----------------s~g-IG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGG-----------------DSG-IGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECC-----------------CCc-HHHHHHHHHHHCCCEEEEecC
Confidence 477899999999 544 999999999999999988654
No 90
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.003 Score=56.88 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+++||||+| | |..|.++|+.++++|+.|+++.++
T Consensus 3 ~~~~~vlItG~-----------------s-~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 3 LKDKRVLLTGA-----------------S-GGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCCCEEEEECC-----------------C-chHHHHHHHHHHHCCCEEEEEECC
Confidence 56889999988 5 459999999999999999999875
No 91
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0037 Score=55.70 Aligned_cols=36 Identities=31% Similarity=0.235 Sum_probs=30.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++++++|+||+| ||..|.++|+.|+++|+.|+++.+
T Consensus 3 ~~~~~~ilItGa------------------sg~iG~~la~~l~~~G~~v~i~~~ 38 (254)
T PRK12746 3 NLDGKVALVTGA------------------SRGIGRAIAMRLANDGALVAIHYG 38 (254)
T ss_pred CCCCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcC
Confidence 467899999998 466999999999999999987653
No 92
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.10 E-value=0.0015 Score=58.22 Aligned_cols=37 Identities=24% Similarity=0.233 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| +|.+|..+|++|+++|+.|+++.++
T Consensus 9 ~~~~k~vlItG~------------------~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGA------------------GDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCC------------------CchHHHHHHHHHHHCCCcEEEEeCC
Confidence 468999999998 4569999999999999999998875
No 93
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.09 E-value=0.003 Score=55.92 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=32.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+.+++||||+| ||..|.++|+.++++|++|+++.++.
T Consensus 3 ~~~~~vlItGa------------------sg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 3 LEGKVAIVTGA------------------SSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred cCCcEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 67889999987 56699999999999999999998753
No 94
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0025 Score=56.91 Aligned_cols=37 Identities=32% Similarity=0.363 Sum_probs=32.7
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 12 ~~~~k~vlItGa------------------s~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 12 DLSGKVAVVTGG------------------ASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCCCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 478899999988 4569999999999999999998875
No 95
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.07 E-value=0.0027 Score=59.40 Aligned_cols=36 Identities=31% Similarity=0.456 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+|+||||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 4 ~~~k~vlVTGa-----------------s~g-IG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 4 DAKGTVIITGA-----------------SSG-VGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCCCEEEEEcC-----------------CCh-HHHHHHHHHHHCCCEEEEEECC
Confidence 56889999998 555 9999999999999999998764
No 96
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.07 E-value=0.0028 Score=60.24 Aligned_cols=35 Identities=34% Similarity=0.367 Sum_probs=33.2
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
++|+||+| |+| .|.++|.++...|++|+.++++..
T Consensus 34 ~hi~itgg-----------------S~g-lgl~la~e~~~~ga~Vti~ar~~~ 68 (331)
T KOG1210|consen 34 RHILITGG-----------------SSG-LGLALALECKREGADVTITARSGK 68 (331)
T ss_pred ceEEEecC-----------------cch-hhHHHHHHHHHccCceEEEeccHH
Confidence 79999999 999 999999999999999999999765
No 97
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0037 Score=55.73 Aligned_cols=37 Identities=32% Similarity=0.334 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 6 ~~~~k~ilItGa------------------sg~IG~~~a~~l~~~G~~Vi~~~r~ 42 (258)
T PRK06949 6 NLEGKVALVTGA------------------SSGLGARFAQVLAQAGAKVVLASRR 42 (258)
T ss_pred CCCCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 477899999998 4559999999999999999998874
No 98
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.05 E-value=0.0039 Score=55.34 Aligned_cols=35 Identities=31% Similarity=0.332 Sum_probs=29.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.++++|||+| ||..|..+|+.|+++|+.|+++..
T Consensus 2 ~~~~~vlItGa------------------~g~iG~~~a~~l~~~g~~v~~~~~ 36 (250)
T PRK08063 2 FSGKVALVTGS------------------SRGIGKAIALRLAEEGYDIAVNYA 36 (250)
T ss_pred CCCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcC
Confidence 45789999998 466999999999999999987543
No 99
>PLN02253 xanthoxin dehydrogenase
Probab=97.05 E-value=0.0028 Score=57.65 Aligned_cols=38 Identities=24% Similarity=0.176 Sum_probs=32.8
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.||++|||+| | |..|.++|++|+++|+.|+++.+.
T Consensus 14 ~~l~~k~~lItGa-----------------s-~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 14 QRLLGKVALVTGG-----------------A-TGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred cccCCCEEEEECC-----------------C-chHHHHHHHHHHHcCCEEEEEeCC
Confidence 3578899999999 4 459999999999999999998753
No 100
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.05 E-value=0.0038 Score=55.43 Aligned_cols=35 Identities=34% Similarity=0.358 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.+|++|||+| | |..|.++|+.++++|+.|+++.+
T Consensus 4 ~~~~~~lItG~-----------------s-~~iG~~la~~l~~~g~~v~~~~~ 38 (247)
T PRK12935 4 LNGKVAIVTGG-----------------A-KGIGKAITVALAQEGAKVVINYN 38 (247)
T ss_pred CCCCEEEEECC-----------------C-CHHHHHHHHHHHHcCCEEEEEcC
Confidence 56899999999 4 45999999999999999987665
No 101
>PRK09186 flagellin modification protein A; Provisional
Probab=97.04 E-value=0.0023 Score=57.02 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++|+||||+| | |..|.++|+.|+++|+.|+++.++
T Consensus 2 ~~~k~vlItGa-----------------s-~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 2 LKGKTILITGA-----------------G-GLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCCEEEEECC-----------------C-chHHHHHHHHHHHCCCEEEEEecC
Confidence 46899999999 4 459999999999999999998764
No 102
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0047 Score=55.20 Aligned_cols=35 Identities=34% Similarity=0.348 Sum_probs=30.5
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.+|.+|||+| |+| .|.++|+.|++.|+.|++..+
T Consensus 2 ~~~k~~lItGa-----------------s~g-IG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 2 LKGKVALVTGA-----------------SRG-IGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCCCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCeEEEEcC
Confidence 35789999999 666 999999999999999988754
No 103
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.0033 Score=56.00 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=29.1
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|.||||+| ||..|.++|+.|+++|++|+++.+.
T Consensus 3 k~vlItG~------------------sg~iG~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 3 PVALVTGG------------------RRGIGLGIARALAAAGFDLAINDRP 35 (256)
T ss_pred cEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEecC
Confidence 68999998 4559999999999999999998764
No 104
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.03 E-value=0.0032 Score=57.19 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=31.5
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.+|.||||+| | |+..|.++|+.|++.|+.|+++.+
T Consensus 4 l~~k~vlItGa-----------------s~~~GIG~a~a~~l~~~G~~v~~~~~ 40 (260)
T PRK06997 4 LAGKRILITGL-----------------LSNRSIAYGIAKACKREGAELAFTYV 40 (260)
T ss_pred cCCcEEEEeCC-----------------CCCCcHHHHHHHHHHHCCCeEEEEcc
Confidence 67899999998 4 456999999999999999998754
No 105
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0029 Score=56.94 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=29.6
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|+||||+| |+| .|.++|+.++++|++|+++.++
T Consensus 2 ~~~vlItGa-----------------s~g-IG~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 2 PLKVFITGA-----------------SSG-IGQALAREYARQGATLGLVARR 35 (257)
T ss_pred CCEEEEEcC-----------------CcH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 468999998 554 9999999999999999998864
No 106
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0038 Score=55.30 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+||||+| ||..|.++|++|+++|+.|+++.++
T Consensus 4 ~~~k~vlItGa------------------sg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 4 LQGKTALITGG------------------TSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEecCC
Confidence 56889999998 4569999999999999999988764
No 107
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.02 E-value=0.0046 Score=54.83 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=30.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+++||||+| ||..|.++|++|+++|++|+++.++
T Consensus 4 ~~~~~vlitGa------------------sg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 4 LKDKVVVVTGS------------------GRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCCcEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999998 4559999999999999999887653
No 108
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.01 E-value=0.0046 Score=54.20 Aligned_cols=36 Identities=25% Similarity=0.150 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+||||+| ||..|..+|+.|+++|+.|+++.++
T Consensus 3 ~~~~~ilItGa------------------sg~iG~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 3 LQGKTALVTGA------------------SRGIGRAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999998 5669999999999999999999875
No 109
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.00 E-value=0.0027 Score=57.18 Aligned_cols=38 Identities=32% Similarity=0.361 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.+.+|++|||+| |+| .|.++|+.|+++|++|+++.++.
T Consensus 6 ~l~~k~vlItG~-----------------s~g-IG~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 6 NLQGKIIIVTGG-----------------SSG-IGLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred cCCCCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 367899999998 544 99999999999999999987654
No 110
>PRK06720 hypothetical protein; Provisional
Probab=97.00 E-value=0.0057 Score=52.88 Aligned_cols=37 Identities=32% Similarity=0.296 Sum_probs=31.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||.++||+| ++| .|.++|..|+++|+.|+++.+.
T Consensus 13 ~l~gk~~lVTGa-----------------~~G-IG~aia~~l~~~G~~V~l~~r~ 49 (169)
T PRK06720 13 KLAGKVAIVTGG-----------------GIG-IGRNTALLLAKQGAKVIVTDID 49 (169)
T ss_pred ccCCCEEEEecC-----------------CCh-HHHHHHHHHHHCCCEEEEEECC
Confidence 367899999999 555 9999999999999999888753
No 111
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.003 Score=57.20 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| ||..|.++|+.|+++|++|+++.++
T Consensus 4 ~~~~k~vlItGa------------------sg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGG------------------GSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 367899999987 4559999999999999999998864
No 112
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.99 E-value=0.0048 Score=54.67 Aligned_cols=36 Identities=25% Similarity=0.292 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++|++|||+| ||..|..+|+.|+++|+.|+++.++
T Consensus 1 ~~~~~ilItGa------------------s~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGG------------------GGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEecCC
Confidence 35789999998 4569999999999999999988764
No 113
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0051 Score=55.70 Aligned_cols=36 Identities=22% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.++++|||+| | |..|.++|+.++++|+.|+++.++
T Consensus 3 ~~~~~ilVtGa-----------------s-ggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 3 LRGKVVAITGG-----------------A-RGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCCEEEEeCC-----------------C-chHHHHHHHHHHHCCCEEEEEECC
Confidence 56889999998 4 459999999999999999888764
No 114
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.99 E-value=0.0053 Score=55.03 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=32.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+||||+| |+| .|.++|+.++++|+.|+++.+.
T Consensus 8 ~l~~k~vlVtG~-----------------s~g-IG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGA-----------------GAG-IGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECC-----------------Cch-HHHHHHHHHHHCCCeEEEEeCC
Confidence 467999999999 555 9999999999999999888753
No 115
>PRK06484 short chain dehydrogenase; Validated
Probab=96.97 E-value=0.0023 Score=63.67 Aligned_cols=25 Identities=20% Similarity=0.397 Sum_probs=22.2
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+| .|.++|+.|+++|+.|+++.++
T Consensus 278 s~g-IG~~~a~~l~~~G~~V~~~~r~ 302 (520)
T PRK06484 278 ARG-IGRAVADRFAAAGDRLLIIDRD 302 (520)
T ss_pred CcH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 555 9999999999999999998764
No 116
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.97 E-value=0.0051 Score=54.15 Aligned_cols=36 Identities=36% Similarity=0.305 Sum_probs=31.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEE-ec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL-YR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i-~g 69 (289)
.+.+|++|||+| ||.+|..+|+.|+++|++|+++ .+
T Consensus 2 ~~~~~~ilI~Ga------------------sg~iG~~la~~l~~~g~~v~~~~~r 38 (247)
T PRK05565 2 KLMGKVAIVTGA------------------SGGIGRAIAELLAKEGAKVVIAYDI 38 (247)
T ss_pred CCCCCEEEEeCC------------------CcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 366789999998 4669999999999999999988 54
No 117
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.97 E-value=0.0045 Score=54.88 Aligned_cols=34 Identities=24% Similarity=0.138 Sum_probs=30.0
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|+||||+| ||..|.++|+.|+++|+.|+++.++
T Consensus 1 ~~~vlItGa------------------~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 1 GKTALVTGA------------------ASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CCEEEEcCC------------------cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999987 5779999999999999999999875
No 118
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0027 Score=56.86 Aligned_cols=38 Identities=32% Similarity=0.385 Sum_probs=33.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++.+|++|||+| | |..|.++|+.|+++|++|+++.++.
T Consensus 3 ~~~~k~~lItGa-----------------s-~gIG~~la~~l~~~g~~v~~~~r~~ 40 (252)
T PRK07856 3 DLTGRVVLVTGG-----------------T-RGIGAGIARAFLAAGATVVVCGRRA 40 (252)
T ss_pred CCCCCEEEEeCC-----------------C-chHHHHHHHHHHHCCCEEEEEeCCh
Confidence 367899999999 4 4599999999999999999998753
No 119
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0039 Score=56.32 Aligned_cols=36 Identities=36% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++++|+||+| | |..|.++|+.|+++|++|+.+.++.
T Consensus 3 ~~~~vlVtGa-----------------s-g~iG~~~a~~l~~~g~~V~~~~r~~ 38 (270)
T PRK06179 3 NSKVALVTGA-----------------S-SGIGRATAEKLARAGYRVFGTSRNP 38 (270)
T ss_pred CCCEEEEecC-----------------C-CHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4678999998 4 5599999999999999999998753
No 120
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0031 Score=56.80 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=30.7
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+.+|++|||+| |++-.|.++|+.|+++|+.|+++.+
T Consensus 14 ~~~~k~vlItG~-----------------sg~gIG~~ia~~l~~~G~~V~~~~~ 50 (262)
T PRK07831 14 LLAGKVVLVTAA-----------------AGTGIGSATARRALEEGARVVISDI 50 (262)
T ss_pred ccCCCEEEEECC-----------------CcccHHHHHHHHHHHcCCEEEEEeC
Confidence 356899999998 5213999999999999999888764
No 121
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.95 E-value=0.0047 Score=55.58 Aligned_cols=33 Identities=30% Similarity=0.341 Sum_probs=28.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 1 m~vlItGa-----------------s~g-IG~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 1 MNVLVTAS-----------------SRG-IGFNVARELLKKGARVVISSRN 33 (259)
T ss_pred CeEEEEcC-----------------CcH-HHHHHHHHHHHcCCEEEEEeCC
Confidence 36899998 655 9999999999999999998764
No 122
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.003 Score=56.58 Aligned_cols=39 Identities=31% Similarity=0.343 Sum_probs=34.0
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.++.||+||||+| |+ ..|.++|+.|+++|++|+++.++.
T Consensus 5 ~~~~~k~vlItGa-----------------s~-gIG~~ia~~l~~~G~~v~~~~r~~ 43 (260)
T PRK06523 5 LELAGKRALVTGG-----------------TK-GIGAATVARLLEAGARVVTTARSR 43 (260)
T ss_pred cCCCCCEEEEECC-----------------CC-chhHHHHHHHHHCCCEEEEEeCCh
Confidence 3578999999999 44 499999999999999999998754
No 123
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.93 E-value=0.0059 Score=53.98 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=31.2
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.|+++|||+| | |..|..+|+.++++|+.|+++.+.
T Consensus 3 ~~~~~~lItG~-----------------~-g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 3 LKDKVIVITGG-----------------A-QGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCEEEEECC-----------------C-chHHHHHHHHHHHCCCEEEEEeCC
Confidence 57889999988 4 559999999999999999888764
No 124
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0048 Score=57.13 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| | |..|.++|+.|+++|++|+++.+.
T Consensus 43 ~~~~k~iLItGa-----------------s-ggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 43 KLKGKVALITGG-----------------D-SGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred CCCCCEEEEeCC-----------------C-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999998 4 459999999999999999988764
No 125
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.93 E-value=0.0039 Score=58.45 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=30.7
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCC-CeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~G-a~V~~i~g~ 70 (289)
.+|++|||+| |+| .|.++|+.++++| +.|+++.++
T Consensus 2 ~~k~vlITGa-----------------s~G-IG~aia~~L~~~G~~~V~l~~r~ 37 (314)
T TIGR01289 2 QKPTVIITGA-----------------SSG-LGLYAAKALAATGEWHVIMACRD 37 (314)
T ss_pred CCCEEEEECC-----------------CCh-HHHHHHHHHHHcCCCEEEEEeCC
Confidence 3679999999 666 9999999999999 999988764
No 126
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0059 Score=54.22 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| |+ ..|.++|+.++++|++|+++.++
T Consensus 3 ~~~~k~vlItGa-----------------sg-giG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 3 DLPGKTALVTGS-----------------SR-GIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCCcEEEEECC-----------------CC-cHHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999998 44 49999999999999999988764
No 127
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.91 E-value=0.0022 Score=60.66 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=31.8
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|+.+|||+| |+| .|.++|+.++++|++|+++.++
T Consensus 52 ~g~~~lITGA-----------------s~G-IG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 52 YGSWALVTGP-----------------TDG-IGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred cCCEEEEeCC-----------------CcH-HHHHHHHHHHHCCCCEEEEECC
Confidence 5899999998 666 9999999999999999999874
No 128
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0048 Score=55.19 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.0
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
||.+|||+| |+| .|.++|+.++++|+.|+++.++
T Consensus 1 ~k~~lItG~-----------------s~g-iG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGG-----------------SSG-MGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999 555 9999999999999999888764
No 129
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0034 Score=57.00 Aligned_cols=35 Identities=37% Similarity=0.455 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+|.+|||+| ||.+|.++|+.++++||.|+.+.++
T Consensus 2 ~~k~~lItGa------------------sg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 2 NKKIAIVTGA------------------SSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCCEEEEECC------------------CchHHHHHHHHHHhCCCEEEEEeCC
Confidence 4688999998 4559999999999999999998764
No 130
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0052 Score=54.87 Aligned_cols=37 Identities=22% Similarity=0.087 Sum_probs=32.7
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|++|||+| ||..|..+|+.++++|+.|+.+.++
T Consensus 8 ~~~~~~vlItGa------------------~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 8 PLDGLRVLVTGG------------------ASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred ccCCCEEEEeCC------------------CCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999998 4669999999999999999988875
No 131
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0035 Score=57.05 Aligned_cols=35 Identities=29% Similarity=0.234 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+|.||||+| ||..|..+|++|+++|+.|+++.++
T Consensus 2 ~~k~vlItGa------------------sg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGA------------------SRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCC------------------CChHHHHHHHHHHHCCCEEEEEECC
Confidence 4678999988 4559999999999999999998875
No 132
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.88 E-value=0.0068 Score=53.14 Aligned_cols=37 Identities=32% Similarity=0.341 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+..|+||||+| ||..|.++|+.|+++|++|+++.+..
T Consensus 4 ~~~~~vlItGa------------------sg~iG~~l~~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12825 4 LMGRVALVTGA------------------ARGLGRAIALRLARAGADVVVHYRSD 40 (249)
T ss_pred CCCCEEEEeCC------------------CchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45689999998 56699999999999999998877643
No 133
>PRK06484 short chain dehydrogenase; Validated
Probab=96.86 E-value=0.0045 Score=61.53 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=32.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..||.+|||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 3 ~~~k~~lITGa-----------------s~g-IG~aia~~l~~~G~~V~~~~r~ 38 (520)
T PRK06484 3 AQSRVVLVTGA-----------------AGG-IGRAACQRFARAGDQVVVADRN 38 (520)
T ss_pred CCCeEEEEECC-----------------CcH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999 667 9999999999999999998764
No 134
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0047 Score=63.14 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=32.6
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||++|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 368 ~~~~k~vlItGa-----------------s~g-iG~~la~~l~~~G~~V~~~~r~ 404 (657)
T PRK07201 368 PLVGKVVLITGA-----------------SSG-IGRATAIKVAEAGATVFLVARN 404 (657)
T ss_pred CCCCCEEEEeCC-----------------CCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 467899999998 555 9999999999999999999864
No 135
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.85 E-value=0.0043 Score=55.57 Aligned_cols=34 Identities=29% Similarity=0.298 Sum_probs=29.8
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|.||||+| + |..|.++|++|+++|++|+++.++
T Consensus 2 ~k~ilItG~-----------------~-~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGG-----------------G-QTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECC-----------------C-cHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999999 3 559999999999999999988764
No 136
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.0043 Score=55.65 Aligned_cols=37 Identities=32% Similarity=0.483 Sum_probs=31.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||++|||+| |+| .|.++|+.|+++|+.|+++.+.
T Consensus 4 ~l~~k~~lItGa-----------------s~g-IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGG-----------------TRG-IGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999999 655 9999999999999999987653
No 137
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.83 E-value=0.0061 Score=54.59 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+||||+| |+| .|.++|+.|+++|+.|+++.++
T Consensus 4 l~~~~vlItGa-----------------s~~-iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 4 LQGKVALLTGA-----------------ASG-IGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCCEEEEeCC-----------------Cch-HHHHHHHHHHHcCCEEEEEcCC
Confidence 56789999998 444 9999999999999999998764
No 138
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.83 E-value=0.0068 Score=54.37 Aligned_cols=38 Identities=29% Similarity=0.378 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccch-hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSS-GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SS-G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++++|.||||+| |+ |-.|.++|+.|+++|+.|+++.+.
T Consensus 2 ~l~~k~vlItGa-----------------s~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 2 PLMKKIALVTGA-----------------SRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCCCcEEEEeCC-----------------CCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 357899999999 54 569999999999999999988764
No 139
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0065 Score=54.32 Aligned_cols=37 Identities=30% Similarity=0.312 Sum_probs=31.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe-EEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~-V~~i~g~ 70 (289)
.+++|+|+||+| + |..|..+|+.++++|++ |+++.+.
T Consensus 3 ~~~~k~vlItGa-----------------~-g~iG~~la~~l~~~G~~~V~~~~r~ 40 (260)
T PRK06198 3 RLDGKVALVTGG-----------------T-QGLGAAIARAFAERGAAGLVICGRN 40 (260)
T ss_pred CCCCcEEEEeCC-----------------C-chHHHHHHHHHHHCCCCeEEEEcCC
Confidence 478899999987 4 45999999999999999 8887764
No 140
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0078 Score=53.95 Aligned_cols=36 Identities=28% Similarity=0.267 Sum_probs=32.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.||+||||+| | |..|.++|++|+++|+.|+++.++
T Consensus 5 ~~~~~vlItGa-----------------s-ggIG~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 5 LAGRVAVITGG-----------------G-SGIGLATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCCCEEEEECC-----------------C-chHHHHHHHHHHHcCCEEEEEeCC
Confidence 67899999998 4 459999999999999999998764
No 141
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.80 E-value=0.0043 Score=56.17 Aligned_cols=38 Identities=11% Similarity=-0.124 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccc-hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFS-SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~S-SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|++|||+| + |+-.|.++|+.|+++|+.|++..++
T Consensus 4 ~~~~k~~lItGa-----------------~~s~GIG~a~a~~la~~G~~v~l~~r~ 42 (256)
T PRK07889 4 LLEGKRILVTGV-----------------ITDSSIAFHVARVAQEQGAEVVLTGFG 42 (256)
T ss_pred cccCCEEEEeCC-----------------CCcchHHHHHHHHHHHCCCEEEEecCc
Confidence 367899999998 4 4559999999999999999887653
No 142
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0068 Score=53.69 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+|+|+||+| | |..|.++|+.++++|+.|+++.++
T Consensus 3 ~l~~k~vlItG~-----------------s-ggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 3 TLSDKTILVTGA-----------------S-QGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCCCEEEEECC-----------------C-CcHHHHHHHHHHHcCCEEEEEeCC
Confidence 477899999988 4 459999999999999999998864
No 143
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0084 Score=53.84 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=30.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+|++|||+| | |-.|..+|+.|+++|+.|+++.+.
T Consensus 7 ~~~k~vlItGa-----------------s-~giG~~la~~l~~~g~~v~~~~~~ 42 (258)
T PRK09134 7 AAPRAALVTGA-----------------A-RRIGRAIALDLAAHGFDVAVHYNR 42 (258)
T ss_pred CCCCEEEEeCC-----------------C-cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999988 4 559999999999999999887653
No 144
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0085 Score=52.70 Aligned_cols=36 Identities=36% Similarity=0.397 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+++||||+| ||..|..+|++|+++|++|+++.++
T Consensus 4 ~~~~~ilItGa------------------tg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 4 LKGKVALITGG------------------SKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 45789999998 6779999999999999999998764
No 145
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0092 Score=52.17 Aligned_cols=37 Identities=27% Similarity=0.326 Sum_probs=32.7
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+++|+||||+| ||..|..+|+.++++|+.|+++.++
T Consensus 4 ~~~~k~vlItGa------------------tg~iG~~la~~l~~~G~~v~~~~r~ 40 (239)
T PRK12828 4 SLQGKVVAITGG------------------FGGLGRATAAWLAARGARVALIGRG 40 (239)
T ss_pred CCCCCEEEEECC------------------CCcHhHHHHHHHHHCCCeEEEEeCC
Confidence 367899999998 5679999999999999999999875
No 146
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.74 E-value=0.0083 Score=53.26 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=28.4
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+||||+| |+ ..|..+|+.|+++|+.|+++++.
T Consensus 3 k~ilItGa-----------------s~-giG~~la~~l~~~g~~v~~~~~~ 35 (248)
T PRK06947 3 KVVLITGA-----------------SR-GIGRATAVLAAARGWSVGINYAR 35 (248)
T ss_pred cEEEEeCC-----------------CC-cHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999998 54 49999999999999999887653
No 147
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0088 Score=54.16 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=28.3
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+||||+| |+ ..|.++|+.++++|+.|+++.+.
T Consensus 1 ~~vlVtGa-----------------sg-gIG~~la~~l~~~g~~V~~~~r~ 33 (270)
T PRK05650 1 NRVMITGA-----------------AS-GLGRAIALRWAREGWRLALADVN 33 (270)
T ss_pred CEEEEecC-----------------CC-hHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899988 44 59999999999999999988764
No 148
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0094 Score=54.12 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=28.4
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|++|||+| ++| .|.++|+.++++|+.|+++.++
T Consensus 1 k~vlItGa-----------------s~g-iG~~la~~la~~G~~vv~~~r~ 33 (272)
T PRK07832 1 KRCFVTGA-----------------ASG-IGRATALRLAAQGAELFLTDRD 33 (272)
T ss_pred CEEEEeCC-----------------CCH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 47899998 554 9999999999999999988764
No 149
>PRK09135 pteridine reductase; Provisional
Probab=96.70 E-value=0.0049 Score=54.34 Aligned_cols=36 Identities=36% Similarity=0.542 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+++||||+| ||..|..+|+.|+++|+.|+.+.+.
T Consensus 4 ~~~~~vlItGa------------------~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGG------------------ARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEcCC
Confidence 45689999998 4669999999999999999999864
No 150
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.01 Score=52.61 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=30.7
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+|++|||+| ||..|..+|+.|+++|+.|+++.++
T Consensus 5 ~~k~vlItG~------------------sg~iG~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 5 SMPRALITGA------------------SSGIGKATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999987 5669999999999999999998874
No 151
>PRK06182 short chain dehydrogenase; Validated
Probab=96.68 E-value=0.0079 Score=54.55 Aligned_cols=35 Identities=37% Similarity=0.451 Sum_probs=30.7
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++|+||||+| | |..|.++|+.|+++|++|+.+.++
T Consensus 2 ~~k~vlItGa-----------------s-ggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGA-----------------S-SGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECC-----------------C-ChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999998 4 459999999999999999998875
No 152
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.66 E-value=0.011 Score=52.52 Aligned_cols=33 Identities=36% Similarity=0.407 Sum_probs=28.4
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|.+|||+| | |..|.++|+.++++|+.|+++.++
T Consensus 1 k~~lItG~-----------------s-g~iG~~la~~l~~~G~~v~~~~r~ 33 (254)
T TIGR02415 1 KVALVTGG-----------------A-QGIGKGIAERLAKDGFAVAVADLN 33 (254)
T ss_pred CEEEEeCC-----------------C-chHHHHHHHHHHHCCCEEEEEeCC
Confidence 57888887 4 559999999999999999998864
No 153
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.65 E-value=0.005 Score=54.22 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=32.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+.+|++|||+| |+ ..|.++|+.|+++|++|+++.++.
T Consensus 3 l~~k~~lVtGa-----------------s~-~iG~~ia~~l~~~G~~v~~~~r~~ 39 (235)
T PRK06550 3 FMTKTVLITGA-----------------AS-GIGLAQARAFLAQGAQVYGVDKQD 39 (235)
T ss_pred CCCCEEEEcCC-----------------Cc-hHHHHHHHHHHHCCCEEEEEeCCc
Confidence 67899999988 44 499999999999999999987653
No 154
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0063 Score=53.46 Aligned_cols=36 Identities=28% Similarity=0.296 Sum_probs=31.7
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.+|+||||+| ||..|..+|++|+++|+.|+.+.++.
T Consensus 2 ~~k~vlItG~------------------s~~iG~~ia~~l~~~G~~v~~~~r~~ 37 (234)
T PRK07577 2 SSRTVLVTGA------------------TKGIGLALSLRLANLGHQVIGIARSA 37 (234)
T ss_pred CCCEEEEECC------------------CCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999988 45699999999999999999998764
No 155
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.65 E-value=0.0075 Score=53.59 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=33.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++.+|++|||+| |+ ..|..+|+.|+++|++|+++.+..
T Consensus 5 ~~~~k~vlItGa-----------------s~-~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 5 DFSGKTVWVTGA-----------------AQ-GIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCCCEEEEeCC-----------------Cc-hHHHHHHHHHHHCCCEEEEEecch
Confidence 467899999998 44 499999999999999999998754
No 156
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=52.89 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||||+| ||..|.++|+.++++|++|+.+.++
T Consensus 1 ~~~vlVtGa------------------sg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGA------------------SEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999988 4559999999999999999998864
No 157
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0066 Score=55.37 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=30.8
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+|+||||+| | |..|.++|+.++++|++|+++.++
T Consensus 3 ~~~~vlVtGa-----------------s-ggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGV-----------------S-SGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecC-----------------C-ChHHHHHHHHHHhCcCEEEEEeCC
Confidence 4688999999 4 459999999999999999999875
No 158
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.012 Score=53.19 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCC-CeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~G-a~V~~i~g~~ 71 (289)
.++++||||+| |+| .|.++|++++++| +.|+++.++.
T Consensus 6 ~~~~~vlItGa-----------------s~g-iG~~la~~l~~~gg~~V~~~~r~~ 43 (253)
T PRK07904 6 GNPQTILLLGG-----------------TSE-IGLAICERYLKNAPARVVLAALPD 43 (253)
T ss_pred CCCcEEEEEcC-----------------CcH-HHHHHHHHHHhcCCCeEEEEeCCc
Confidence 46789999999 555 9999999999995 8999987753
No 159
>PRK08264 short chain dehydrogenase; Validated
Probab=96.57 E-value=0.0064 Score=53.62 Aligned_cols=38 Identities=26% Similarity=0.186 Sum_probs=33.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCC-eEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga-~V~~i~g~~s 72 (289)
+.+++||||+| ||..|.++|+.|+++|+ .|+.+.++..
T Consensus 4 ~~~~~vlItGg------------------sg~iG~~la~~l~~~G~~~V~~~~r~~~ 42 (238)
T PRK08264 4 IKGKVVLVTGA------------------NRGIGRAFVEQLLARGAAKVYAAARDPE 42 (238)
T ss_pred CCCCEEEEECC------------------CchHHHHHHHHHHHCCcccEEEEecChh
Confidence 57889999999 56699999999999999 9998887543
No 160
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.0088 Score=53.06 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=30.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|++|||+| |+| .|.++|+.+++.|++|+++.++
T Consensus 3 l~~k~ilItGa-----------------s~g-IG~~la~~l~~~G~~vv~~~~~ 38 (253)
T PRK08642 3 ISEQTVLVTGG-----------------SRG-LGAAIARAFAREGARVVVNYHQ 38 (253)
T ss_pred CCCCEEEEeCC-----------------CCc-HHHHHHHHHHHCCCeEEEEcCC
Confidence 46789999998 555 9999999999999999887653
No 161
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.0085 Score=54.35 Aligned_cols=34 Identities=29% Similarity=0.292 Sum_probs=29.8
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|+||||+| ||..|.++|++++++|+.|+++.++
T Consensus 2 ~k~vlVtGa------------------sg~IG~~la~~L~~~g~~v~~~~r~ 35 (276)
T PRK06482 2 SKTWFITGA------------------SSGFGRGMTERLLARGDRVAATVRR 35 (276)
T ss_pred CCEEEEecC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 368999998 4669999999999999999998874
No 162
>PRK05599 hypothetical protein; Provisional
Probab=96.53 E-value=0.009 Score=53.67 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=27.4
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|.+|||+| |+| .|.++|+.|. .|+.|+++.++
T Consensus 1 ~~vlItGa-----------------s~G-IG~aia~~l~-~g~~Vil~~r~ 32 (246)
T PRK05599 1 MSILILGG-----------------TSD-IAGEIATLLC-HGEDVVLAARR 32 (246)
T ss_pred CeEEEEeC-----------------ccH-HHHHHHHHHh-CCCEEEEEeCC
Confidence 46899998 777 8999999998 59999998764
No 163
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.53 E-value=0.016 Score=51.10 Aligned_cols=36 Identities=28% Similarity=0.161 Sum_probs=30.6
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++++|++|||+| ||..|.++|+.|+++|+.|++..+
T Consensus 3 ~~~~~~vlItGa------------------~g~iG~~la~~l~~~g~~v~~~~~ 38 (245)
T PRK12936 3 DLSGRKALVTGA------------------SGGIGEEIARLLHAQGAIVGLHGT 38 (245)
T ss_pred CCCCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEcC
Confidence 357889999998 466999999999999998877654
No 164
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.0094 Score=53.47 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=29.2
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|++|||+| | |..|.++|+.++++|+.|+++.++
T Consensus 2 k~vlItGa-----------------s-g~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 2 KSIFITGA-----------------A-SGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred cEEEEeCC-----------------C-chHHHHHHHHHHHCCCeEEEEeCC
Confidence 67999998 4 559999999999999999998764
No 165
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.51 E-value=0.017 Score=50.82 Aligned_cols=32 Identities=41% Similarity=0.476 Sum_probs=28.1
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
|.+|||+| ||..|..+|+.|+++|+.|+.+.+
T Consensus 1 k~~lItG~------------------sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGG------------------MGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeC
Confidence 57889988 455999999999999999999887
No 166
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.015 Score=52.22 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+|++|||+| ++| .|.++|+.|+++|+.|+++.++
T Consensus 4 ~~~~k~vlItG~-----------------~~g-iG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 4 HLAGKRVLITGA-----------------SKG-IGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCCCEEEEeCC-----------------Cch-HHHHHHHHHHHcCCEEEEEeCC
Confidence 367899999999 555 9999999999999999998864
No 167
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.016 Score=51.29 Aligned_cols=33 Identities=36% Similarity=0.434 Sum_probs=28.0
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+|.+|||+| ||..|.++|++|+++|+.|+++.+
T Consensus 2 ~~~~lVtG~------------------~~~iG~~~a~~l~~~G~~vv~~~~ 34 (248)
T PRK06123 2 RKVMIITGA------------------SRGIGAATALLAAERGYAVCLNYL 34 (248)
T ss_pred CCEEEEECC------------------CchHHHHHHHHHHHCCCeEEEecC
Confidence 468999998 455999999999999999987764
No 168
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.46 E-value=0.011 Score=52.34 Aligned_cols=34 Identities=29% Similarity=0.339 Sum_probs=30.0
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|++|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 2 ~k~vlItGa-----------------s~g-IG~~ia~~l~~~G~~V~~~~r~ 35 (236)
T PRK06483 2 PAPILITGA-----------------GQR-IGLALAWHLLAQGQPVIVSYRT 35 (236)
T ss_pred CceEEEECC-----------------CCh-HHHHHHHHHHHCCCeEEEEeCC
Confidence 578999999 555 9999999999999999998864
No 169
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.45 E-value=0.016 Score=56.86 Aligned_cols=52 Identities=23% Similarity=0.191 Sum_probs=32.8
Q ss_pred CCCcEEEEeCCCcccccCC-----CCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQ-----RCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~-----~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..|+.+.+.+|.+..|-|. +.+=.|+-- ||-.|.++|+.+.++|++|+++.+
T Consensus 186 ~~g~~i~~~~~~~~~~~~~~~~~~g~~vlItGa-sggIG~~la~~l~~~Ga~vi~~~~ 242 (450)
T PRK08261 186 VSGQVVRVGAADAAPPADWDRPLAGKVALVTGA-ARGIGAAIAEVLARDGAHVVCLDV 242 (450)
T ss_pred ccCcEEEecCCcccCCCCcccCCCCCEEEEecC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4555666555554333221 012233333 455999999999999999999865
No 170
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.41 E-value=0.015 Score=54.00 Aligned_cols=40 Identities=38% Similarity=0.321 Sum_probs=36.3
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
..+.||.+|||+| |+| .|.++|+.|++.|+.|+...++..
T Consensus 4 ~~l~gkvalVTG~-----------------s~G-IG~aia~~la~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 4 GRLAGKVALVTGG-----------------SSG-IGKAIALLLAKAGAKVVITGRSEE 43 (270)
T ss_pred ccCCCcEEEEECC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3588999999999 899 999999999999999999998644
No 171
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.41 E-value=0.011 Score=61.70 Aligned_cols=38 Identities=32% Similarity=0.364 Sum_probs=33.1
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.||+||||+| + |..|.++|+.|+++|+.|+++.++
T Consensus 410 ~~l~gkvvLVTGa-----------------s-ggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 410 KTLARRVAFVTGG-----------------A-GGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred cCCCCCEEEEeCC-----------------C-cHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4578999999998 4 559999999999999999998764
No 172
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.40 E-value=0.019 Score=54.69 Aligned_cols=40 Identities=28% Similarity=0.344 Sum_probs=34.5
Q ss_pred CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 14 DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 14 ~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
..+..|+.++||+| +|| .|.++|++++.+|+.|++.+|+.
T Consensus 30 ~~~~~~~~~vVTGa-----------------nsG-IG~eta~~La~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 30 GIDLSGKVALVTGA-----------------TSG-IGFETARELALRGAHVVLACRNE 69 (314)
T ss_pred cccCCCcEEEEECC-----------------CCc-hHHHHHHHHHhCCCEEEEEeCCH
Confidence 34567888888888 777 99999999999999999999864
No 173
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.027 Score=51.35 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=31.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+..+|.+|||+| + |-.|.++|+.|+.+|+.|+++.++
T Consensus 7 ~~~~~~vlVtGa-----------------~-g~iG~~la~~L~~~G~~V~~~~r~ 43 (274)
T PRK07775 7 HPDRRPALVAGA-----------------S-SGIGAATAIELAAAGFPVALGARR 43 (274)
T ss_pred CCCCCEEEEECC-----------------C-chHHHHHHHHHHHCCCEEEEEeCC
Confidence 356789999998 4 559999999999999999888764
No 174
>PRK05855 short chain dehydrogenase; Validated
Probab=96.33 E-value=0.021 Score=56.76 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=31.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
...++++|||+| |+| .|.++|+.++++|++|+++.++
T Consensus 312 ~~~~~~~lv~G~-----------------s~g-iG~~~a~~l~~~G~~v~~~~r~ 348 (582)
T PRK05855 312 PFSGKLVVVTGA-----------------GSG-IGRETALAFAREGAEVVASDID 348 (582)
T ss_pred cCCCCEEEEECC-----------------cCH-HHHHHHHHHHHCCCEEEEEeCC
Confidence 355678888887 555 9999999999999999998874
No 175
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.32 E-value=0.013 Score=52.28 Aligned_cols=25 Identities=32% Similarity=0.347 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
||..|.++|+.|++.|++|+++.++
T Consensus 9 sg~iG~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 9 TAGFGECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CchHHHHHHHHHHHCCCEEEEEECC
Confidence 5669999999999999999998874
No 176
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.021 Score=52.06 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=30.5
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+|+||||+| | |..|.++|+.|+++|++|+++.++
T Consensus 3 ~~k~vlItGa-----------------s-ggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGC-----------------S-SGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCC-----------------C-cHHHHHHHHHHHHCCCEEEEEECC
Confidence 3678999998 4 559999999999999999998875
No 177
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.25 E-value=0.01 Score=56.79 Aligned_cols=37 Identities=30% Similarity=0.384 Sum_probs=33.2
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
.++.|+||++ ||-.|.+|.+.++.|||.|.-..|..+
T Consensus 5 ~~~~VcVTGA------------------sGfIgswivk~LL~rGY~V~gtVR~~~ 41 (327)
T KOG1502|consen 5 EGKKVCVTGA------------------SGFIGSWIVKLLLSRGYTVRGTVRDPE 41 (327)
T ss_pred CCcEEEEeCC------------------chHHHHHHHHHHHhCCCEEEEEEcCcc
Confidence 6789999987 899999999999999999998887643
No 178
>PLN02778 3,5-epimerase/4-reductase
Probab=96.23 E-value=0.013 Score=54.79 Aligned_cols=34 Identities=9% Similarity=-0.001 Sum_probs=29.9
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
...++||||+| ||..|..++++++++|++|++..
T Consensus 7 ~~~~kiLVtG~------------------tGfiG~~l~~~L~~~g~~V~~~~ 40 (298)
T PLN02778 7 SATLKFLIYGK------------------TGWIGGLLGKLCQEQGIDFHYGS 40 (298)
T ss_pred CCCCeEEEECC------------------CCHHHHHHHHHHHhCCCEEEEec
Confidence 45578999998 89999999999999999998643
No 179
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.017 Score=52.35 Aligned_cols=33 Identities=33% Similarity=0.394 Sum_probs=29.0
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+||||+| |+| .|.++|+.++++|+.|+++.+.
T Consensus 2 k~vlItGa-----------------sgg-iG~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 2 PVVLITGC-----------------SSG-IGRALADAFKAAGYEVWATARK 34 (274)
T ss_pred CEEEEecC-----------------CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 68999998 554 9999999999999999998864
No 180
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.017 Score=51.56 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|++|||+| ++ ..|.++|+.|+++|++|+++.++
T Consensus 2 ~k~ilItGa-----------------t~-~iG~~la~~L~~~g~~v~~~~r~ 35 (257)
T PRK07074 2 KRTALVTGA-----------------AG-GIGQALARRFLAAGDRVLALDID 35 (257)
T ss_pred CCEEEEECC-----------------cc-hHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999998 44 49999999999999999998764
No 181
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.20 E-value=0.026 Score=49.77 Aligned_cols=32 Identities=38% Similarity=0.482 Sum_probs=27.2
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
|.||||+| ||..|.++++.|+++|++|+++.+
T Consensus 2 ~~~lItGa------------------~g~iG~~l~~~l~~~g~~v~~~~~ 33 (247)
T PRK09730 2 AIALVTGG------------------SRGIGRATALLLAQEGYTVAVNYQ 33 (247)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHHCCCEEEEEeC
Confidence 47889988 456999999999999999988653
No 182
>PRK07069 short chain dehydrogenase; Validated
Probab=96.18 E-value=0.016 Score=51.28 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=22.1
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++| .|..+|+.|+++|++|+++.++
T Consensus 8 ~~~-iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 8 AGG-LGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred CCh-HHHHHHHHHHHCCCEEEEEeCC
Confidence 555 9999999999999999998864
No 183
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.12 E-value=0.026 Score=51.11 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=28.8
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 2 ~~~lITGa-----------------s~g-IG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGA-----------------AKR-IGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCC-----------------CCc-HHHHHHHHHHhCCCeEEEEcCC
Confidence 47899998 666 9999999999999999988753
No 184
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.03 E-value=0.036 Score=48.74 Aligned_cols=33 Identities=33% Similarity=0.456 Sum_probs=29.0
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|++|||+| | |..|..+|+.|+++|+.|+++.++
T Consensus 3 k~vlItG~-----------------s-~~iG~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 3 KIALVTGA-----------------K-RGIGSAIARELLNDGYRVIATYFS 35 (245)
T ss_pred CEEEEeCC-----------------C-chHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899988 4 559999999999999999999875
No 185
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=95.90 E-value=0.042 Score=44.93 Aligned_cols=24 Identities=25% Similarity=0.343 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHHHCCCe-EEEEec
Q 022985 46 SGHRGAASTEHLIKMGYA-VIFLYR 69 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~-V~~i~g 69 (289)
||..|.++|+.++++|+. |+++.+
T Consensus 9 ~~~iG~~~~~~l~~~g~~~v~~~~r 33 (180)
T smart00822 9 LGGLGLELARWLAERGARHLVLLSR 33 (180)
T ss_pred CChHHHHHHHHHHHhhCCeEEEEeC
Confidence 456999999999999985 555554
No 186
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.011 Score=53.65 Aligned_cols=39 Identities=23% Similarity=0.114 Sum_probs=34.0
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
..+.||++|||+| |+| .|.++|+.|+++|++|+++.+..
T Consensus 10 ~~l~~k~~lITGa-----------------s~g-IG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 10 STWQGKRIGITGA-----------------SGA-LGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred HhhCCCEEEEEcC-----------------CcH-HHHHHHHHHHHCCCEEEEEECCc
Confidence 4578999999999 665 99999999999999999988653
No 187
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.028 Score=49.58 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=32.3
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+++++||+| ||..|..+|+.|+++|++|+++.++
T Consensus 6 ~~~~~~~lItGa------------------~g~iG~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 6 DFSGKSVLVTGA------------------SSGIGRACAVALAQRGARVVAAARN 42 (245)
T ss_pred ccCCCEEEEeCC------------------cchHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999998 4559999999999999999998864
No 188
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.021 Score=50.27 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=29.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|+|+||+| ||..|.++|+.|+++|+.|+++.++.
T Consensus 2 k~vlItG~------------------sg~iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGA------------------SRGLGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred CEEEEeCC------------------CchHHHHHHHHHHhCCCEEEEEeCCC
Confidence 57899998 45699999999999999999998753
No 189
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.81 E-value=0.017 Score=51.39 Aligned_cols=39 Identities=36% Similarity=0.417 Sum_probs=34.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
.+.+|+||||+| |+| .|.++|+.|+++|+.|+++.+...
T Consensus 2 ~~~~~~ilITGa-----------------s~G-iG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 2 DLSGKVALVTGA-----------------SSG-IGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCCCEEEEeCC-----------------CCH-HHHHHHHHHHHCCCeEEEEcCCCc
Confidence 367899999999 777 999999999999999999997643
No 190
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.77 E-value=0.024 Score=57.82 Aligned_cols=40 Identities=25% Similarity=0.353 Sum_probs=34.8
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
..++||+||||+| +|..|.++++.+++.|.+.+.+.+.+.
T Consensus 246 ~~~~gK~vLVTGa------------------gGSiGsel~~qil~~~p~~i~l~~~~E 285 (588)
T COG1086 246 AMLTGKTVLVTGG------------------GGSIGSELCRQILKFNPKEIILFSRDE 285 (588)
T ss_pred hHcCCCEEEEeCC------------------CCcHHHHHHHHHHhcCCCEEEEecCch
Confidence 3467999999999 799999999999999998888887654
No 191
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=95.71 E-value=0.024 Score=51.93 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||++|+|+| .+| .|.+.+++++.+|..|..|.-+
T Consensus 2 ~~tGKna~vtgg-----------------agG-IGl~~sk~Ll~kgik~~~i~~~ 38 (261)
T KOG4169|consen 2 DLTGKNALVTGG-----------------AGG-IGLATSKALLEKGIKVLVIDDS 38 (261)
T ss_pred cccCceEEEecC-----------------Cch-hhHHHHHHHHHcCchheeehhh
Confidence 478999999999 666 9999999999999999888754
No 192
>PRK08324 short chain dehydrogenase; Validated
Probab=95.65 E-value=0.055 Score=56.42 Aligned_cols=38 Identities=26% Similarity=0.269 Sum_probs=32.9
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.||+||||+| +|..|.++|+.|+++|+.|+++.++
T Consensus 418 ~~l~gk~vLVTGa------------------sggIG~~la~~L~~~Ga~Vvl~~r~ 455 (681)
T PRK08324 418 KPLAGKVALVTGA------------------AGGIGKATAKRLAAEGACVVLADLD 455 (681)
T ss_pred cCCCCCEEEEecC------------------CCHHHHHHHHHHHHCcCEEEEEeCC
Confidence 3467899999998 4559999999999999999998865
No 193
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.64 E-value=0.018 Score=54.01 Aligned_cols=39 Identities=36% Similarity=0.485 Sum_probs=35.0
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.++++|+||||+| ||..|..++++++.+|++|+.+.+..
T Consensus 2 ~~~~~~~vlVTGa------------------tGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 2 GDPPRKVALITGI------------------TGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCCCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEEeccc
Confidence 4678999999998 78899999999999999999987754
No 194
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.63 E-value=0.059 Score=52.92 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=30.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHH--HHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAA--STEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~--iAe~~~~~Ga~V~~i~g 69 (289)
..+|++|||+| |+| .|.+ +|++| ..|++|+.++.
T Consensus 39 ~ggK~aLVTGa-----------------SsG-IGlA~~IA~al-~~GA~Vi~v~~ 74 (398)
T PRK13656 39 NGPKKVLVIGA-----------------SSG-YGLASRIAAAF-GAGADTLGVFF 74 (398)
T ss_pred CCCCEEEEECC-----------------Cch-HhHHHHHHHHH-HcCCeEEEEec
Confidence 56799999999 777 8888 89999 99999988874
No 195
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.068 Score=48.93 Aligned_cols=22 Identities=18% Similarity=0.126 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHCCCeEEEEecC
Q 022985 48 HRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 48 ~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..|.++|+.|. +|++|+++.+.
T Consensus 12 gIG~~la~~l~-~G~~Vv~~~r~ 33 (275)
T PRK06940 12 GIGQAIARRVG-AGKKVLLADYN 33 (275)
T ss_pred hHHHHHHHHHh-CCCEEEEEeCC
Confidence 39999999996 89999998764
No 196
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=95.54 E-value=0.029 Score=52.09 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=27.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++||||+| +|..|..+++.|+++| +|+.+.+.
T Consensus 1 m~iLVtG~------------------~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 1 MNILLFGK------------------TGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred CeEEEECC------------------CCHHHHHHHHHhhccC-CEEEeccc
Confidence 47999998 8999999999999999 78777653
No 197
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=95.53 E-value=0.043 Score=48.82 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=55.2
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhccccc
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLL 124 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll 124 (289)
+|+..|.++|+.|++.||+|++..++... . ...+.+..+++ ..+++
T Consensus 4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~~~-------------------------~----~~~~~~l~~~~-----~~~~~ 49 (241)
T PF13561_consen 4 SSSGIGRAIARALAEEGANVILTDRNEEK-------------------------L----ADALEELAKEY-----GAEVI 49 (241)
T ss_dssp STSHHHHHHHHHHHHTTEEEEEEESSHHH-------------------------H----HHHHHHHHHHT-----TSEEE
T ss_pred CCCChHHHHHHHHHHCCCEEEEEeCChHH-------------------------H----HHHHHHHHHHc-----CCceE
Confidence 35569999999999999999999974220 0 11222222222 23356
Q ss_pred ccccccHHHHHHHHHHHHHHhhhc-CCcchhhhhhhcCCC
Q 022985 125 KLPFTTIFEYLQMLQMIAVSSRSL-GPCSMFYLAAAVSDF 163 (289)
Q Consensus 125 ~~~f~t~~dy~~~l~~i~~~~~~~-~~~d~~i~aAAVsDf 163 (289)
...+...++...+.+.+. +.. +..|++|++|+.+..
T Consensus 50 ~~D~~~~~~v~~~~~~~~---~~~~g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 50 QCDLSDEESVEALFDEAV---ERFGGRIDILVNNAGISPP 86 (241)
T ss_dssp ESCTTSHHHHHHHHHHHH---HHHCSSESEEEEEEESCTG
T ss_pred eecCcchHHHHHHHHHHH---hhcCCCeEEEEeccccccc
Confidence 666777777666666554 445 889999999998765
No 198
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=95.49 E-value=0.059 Score=47.48 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=21.9
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+| .|.++|+.++++|++|+++.+.
T Consensus 7 s~g-iG~~~a~~l~~~G~~v~~~~~~ 31 (239)
T TIGR01831 7 SRG-IGRAIANRLAADGFEICVHYHS 31 (239)
T ss_pred Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 555 9999999999999999988764
No 199
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.43 E-value=0.042 Score=50.52 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=30.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
++||||+| ||..|..+|++|+++|++|+.+.++..
T Consensus 1 ~~vlItG~------------------~G~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (328)
T TIGR03466 1 MKVLVTGA------------------TGFVGSAVVRLLLEQGEEVRVLVRPTS 35 (328)
T ss_pred CeEEEECC------------------ccchhHHHHHHHHHCCCEEEEEEecCc
Confidence 36889887 788999999999999999999998643
No 200
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.17 E-value=0.033 Score=52.78 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=37.4
Q ss_pred HhhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 9 AFFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 9 ~~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+|..+.-+++|+||||+| ||..|..++++|+++|++|+.+.+.
T Consensus 5 ~~~~~~~~~~~~~vlVtGa------------------tGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 5 EELRTKLVLAPKRWLITGV------------------AGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred hhhhhcccccCCEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444455688899999998 8999999999999999999988764
No 201
>PLN00015 protochlorophyllide reductase
Probab=95.17 E-value=0.059 Score=50.21 Aligned_cols=25 Identities=36% Similarity=0.582 Sum_probs=21.9
Q ss_pred chhHHHHHHHHHHHHCC-CeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMG-YAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~G-a~V~~i~g~ 70 (289)
|+| +|.++|+.|+++| +.|+++.++
T Consensus 6 s~G-IG~aia~~l~~~G~~~V~~~~r~ 31 (308)
T PLN00015 6 SSG-LGLATAKALAETGKWHVVMACRD 31 (308)
T ss_pred CCh-HHHHHHHHHHHCCCCEEEEEeCC
Confidence 566 9999999999999 999888764
No 202
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=95.12 E-value=0.036 Score=57.51 Aligned_cols=37 Identities=24% Similarity=0.220 Sum_probs=33.1
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC-CCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~~ 71 (289)
+++++||||+| ||-.|..++++++++ |++|+.+.+..
T Consensus 313 ~~~~~VLVTGa------------------tGFIGs~Lv~~Ll~~~g~~V~~l~r~~ 350 (660)
T PRK08125 313 KRRTRVLILGV------------------NGFIGNHLTERLLRDDNYEVYGLDIGS 350 (660)
T ss_pred hcCCEEEEECC------------------CchHHHHHHHHHHhCCCcEEEEEeCCc
Confidence 56889999998 899999999999986 79999998754
No 203
>PLN02583 cinnamoyl-CoA reductase
Probab=95.08 E-value=0.043 Score=50.87 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=32.5
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+|+||||+| ||..|.++++.|+++||+|+.+.++
T Consensus 4 ~~~k~vlVTGa------------------tG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDA------------------SGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCCEEEEECC------------------CCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 45789999998 7889999999999999999998874
No 204
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.06 E-value=0.039 Score=52.16 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=33.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++||+||||+| ||..|.++|+.++++|++|+.+.+..
T Consensus 2 ~~~k~ilItGa------------------tG~IG~~l~~~L~~~G~~V~~~~r~~ 38 (349)
T TIGR02622 2 WQGKKVLVTGH------------------TGFKGSWLSLWLLELGAEVYGYSLDP 38 (349)
T ss_pred cCCCEEEEECC------------------CChhHHHHHHHHHHCCCEEEEEeCCC
Confidence 56899999998 78899999999999999999887653
No 205
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=94.95 E-value=0.12 Score=45.12 Aligned_cols=25 Identities=40% Similarity=0.404 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
||..|..+|+.|+++|++|+++.++
T Consensus 7 ~g~iG~~la~~l~~~G~~v~~~~r~ 31 (239)
T TIGR01830 7 SRGIGRAIALKLAKEGAKVIITYRS 31 (239)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5569999999999999999999874
No 206
>PRK12742 oxidoreductase; Provisional
Probab=94.93 E-value=0.048 Score=47.88 Aligned_cols=36 Identities=31% Similarity=0.309 Sum_probs=30.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+.+|+||||+| | |..|.++|+.++++|++|+++.+
T Consensus 3 ~~~~k~vlItGa-----------------s-ggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGG-----------------S-RGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECC-----------------C-ChHHHHHHHHHHHCCCEEEEecC
Confidence 367899999988 4 45999999999999999987754
No 207
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.93 E-value=0.047 Score=50.43 Aligned_cols=36 Identities=31% Similarity=0.407 Sum_probs=32.5
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++|+||||+| ||..|..+++.++++|++|+.+.++.
T Consensus 3 ~~~~ilVtGa------------------tGfIG~~l~~~L~~~g~~V~~~~r~~ 38 (322)
T PLN02662 3 EGKVVCVTGA------------------SGYIASWLVKLLLQRGYTVKATVRDP 38 (322)
T ss_pred CCCEEEEECC------------------hHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 5789999998 89999999999999999999887754
No 208
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.80 E-value=0.043 Score=51.67 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=31.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
.+.||.+|||+|++ |+| +|.++|+.|+++||.|.+-.
T Consensus 5 ~~~gk~alITGa~~---------------~~G-IG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 5 DLTGKIAFIAGIGD---------------DQG-YGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCCCCEEEEeCCCC---------------CCC-HHHHHHHHHHHCCCEEEEEe
Confidence 57899999999931 367 99999999999999998854
No 209
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.80 E-value=0.056 Score=47.50 Aligned_cols=36 Identities=19% Similarity=0.074 Sum_probs=32.2
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+||||+| ||..|.++|+.|+++|++|+++.++
T Consensus 3 ~~~~~vlItGa------------------~g~iG~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 3 LKGKKVAIIGV------------------SEGLGYAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred cCCcEEEEECC------------------CchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56889999998 4669999999999999999998874
No 210
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.09 Score=45.27 Aligned_cols=31 Identities=29% Similarity=0.146 Sum_probs=26.7
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++|||+| |+ ..|.++|+.|.++ ++|+++.++
T Consensus 2 ~vlItGa-----------------s~-giG~~la~~l~~~-~~vi~~~r~ 32 (199)
T PRK07578 2 KILVIGA-----------------SG-TIGRAVVAELSKR-HEVITAGRS 32 (199)
T ss_pred eEEEEcC-----------------Cc-HHHHHHHHHHHhc-CcEEEEecC
Confidence 6889988 54 4999999999999 999998874
No 211
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.60 E-value=0.052 Score=51.29 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=31.6
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEE
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 66 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~ 66 (289)
.+++||.+|||+|. .|+| .|.++|+.|+++|+.|++
T Consensus 5 ~~l~gk~alITGa~---------------~s~G-IG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 5 IDLRGKRAFIAGVA---------------DDNG-YGWAIAKALAAAGAEILV 40 (303)
T ss_pred cCCCCCEEEEeCCC---------------CCCc-HHHHHHHHHHHCCCEEEE
Confidence 45899999999992 2567 999999999999999998
No 212
>PLN02572 UDP-sulfoquinovose synthase
Probab=94.54 E-value=0.055 Score=53.58 Aligned_cols=37 Identities=30% Similarity=0.415 Sum_probs=33.2
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..+++|+||||+| ||..|..|+++|+++|++|+.+.+
T Consensus 43 ~~~~~k~VLVTGa------------------tGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 43 SSSKKKKVMVIGG------------------DGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred ccccCCEEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEec
Confidence 5678999999988 888999999999999999999753
No 213
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=94.44 E-value=0.072 Score=49.49 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=29.0
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+||||+| ||..|.+++++|.++|++|+.+.++
T Consensus 1 MriLI~Ga------------------sG~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 1 MRILITGA------------------SGFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEEETT------------------TSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred CEEEEECC------------------CCHHHHHHHHHHhhCCCEEEEeCch
Confidence 37889886 8999999999999999999988654
No 214
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=94.40 E-value=0.075 Score=49.42 Aligned_cols=25 Identities=36% Similarity=0.543 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHHHCC--CeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMG--YAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~G--a~V~~i~g~ 70 (289)
||..|..|++.|+++| ++|..+...
T Consensus 6 sGflG~~iv~~Ll~~g~~~~Vr~~d~~ 32 (280)
T PF01073_consen 6 SGFLGSHIVRQLLERGYIYEVRVLDRS 32 (280)
T ss_pred CcHHHHHHHHHHHHCCCceEEEEcccc
Confidence 8999999999999999 788877654
No 215
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.39 E-value=0.076 Score=49.38 Aligned_cols=38 Identities=32% Similarity=0.389 Sum_probs=33.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
..||+||||+| ||..|..+++.|+++|++|+.+.++.+
T Consensus 3 ~~~~~vlVTGa------------------tG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (322)
T PLN02986 3 GGGKLVCVTGA------------------SGYIASWIVKLLLLRGYTVKATVRDLT 40 (322)
T ss_pred CCCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 35789999998 899999999999999999998887543
No 216
>PLN00198 anthocyanidin reductase; Provisional
Probab=94.36 E-value=0.081 Score=49.59 Aligned_cols=37 Identities=30% Similarity=0.471 Sum_probs=33.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
..+++||||+| ||..|..+|++++++|++|+.+.+..
T Consensus 7 ~~~~~vlItG~------------------~GfIG~~l~~~L~~~g~~V~~~~r~~ 43 (338)
T PLN00198 7 TGKKTACVIGG------------------TGFLASLLIKLLLQKGYAVNTTVRDP 43 (338)
T ss_pred CCCCeEEEECC------------------chHHHHHHHHHHHHCCCEEEEEECCC
Confidence 56889999999 69999999999999999998887654
No 217
>PRK06924 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.067 Score=47.51 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=29.3
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|+||||+| ||..|.++|++|+++|++|+++.+..
T Consensus 2 k~vlItGa------------------sggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGT------------------SQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecC------------------CchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 57999987 45599999999999999999988753
No 218
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.21 E-value=0.061 Score=49.12 Aligned_cols=39 Identities=28% Similarity=0.291 Sum_probs=34.9
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
..-|+||||+| |+|-.|.++|.+|.+.|+.|.--+|..+
T Consensus 5 ~~~k~VlItgc-----------------s~GGIG~ala~ef~~~G~~V~AtaR~~e 43 (289)
T KOG1209|consen 5 SQPKKVLITGC-----------------SSGGIGYALAKEFARNGYLVYATARRLE 43 (289)
T ss_pred cCCCeEEEeec-----------------CCcchhHHHHHHHHhCCeEEEEEccccc
Confidence 34589999999 9999999999999999999998888655
No 219
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.12 E-value=0.078 Score=47.16 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=29.1
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++|||+| | |..|.++|+.++++|++|+++.++
T Consensus 2 ~~vlItGa-----------------s-~giG~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 2 TAVLITGA-----------------T-SGIGKQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred cEEEEEcC-----------------C-cHHHHHHHHHHHhCCCEEEEEECC
Confidence 57999998 5 459999999999999999999874
No 220
>PLN02686 cinnamoyl-CoA reductase
Probab=94.09 E-value=0.092 Score=50.45 Aligned_cols=37 Identities=30% Similarity=0.566 Sum_probs=32.6
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
...+|+||||+| +|..|..+++.|+++||+|+.+.++
T Consensus 50 ~~~~k~VLVTGa------------------tGfIG~~lv~~L~~~G~~V~~~~r~ 86 (367)
T PLN02686 50 DAEARLVCVTGG------------------VSFLGLAIVDRLLRHGYSVRIAVDT 86 (367)
T ss_pred CCCCCEEEEECC------------------chHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467889999998 7889999999999999999987764
No 221
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.06 E-value=0.09 Score=48.85 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=31.6
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.||+||||+| ||..|..+++.|+++|++|+++.+..
T Consensus 4 ~~k~vlVtG~------------------~G~IG~~l~~~L~~~G~~V~~~~r~~ 39 (325)
T PLN02989 4 GGKVVCVTGA------------------SGYIASWIVKLLLFRGYTINATVRDP 39 (325)
T ss_pred CCCEEEEECC------------------chHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4789999988 68899999999999999998877653
No 222
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.87 E-value=0.098 Score=51.56 Aligned_cols=37 Identities=27% Similarity=0.281 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++||+|+||+| | |..|.++|+.+.++|+.|+.+.++
T Consensus 175 sl~gK~VLITGA-----------------S-gGIG~aLA~~La~~G~~Vi~l~r~ 211 (406)
T PRK07424 175 SLKGKTVAVTGA-----------------S-GTLGQALLKELHQQGAKVVALTSN 211 (406)
T ss_pred CCCCCEEEEeCC-----------------C-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999998 4 559999999999999999998864
No 223
>PRK09291 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.11 Score=46.27 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=29.8
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|+||||+| ||..|.++|+.|+++|+.|+.+.+.
T Consensus 2 ~~~vlVtGa------------------sg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGA------------------GSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCC------------------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999988 5669999999999999999988764
No 224
>PLN02214 cinnamoyl-CoA reductase
Probab=93.78 E-value=0.11 Score=49.21 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=33.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+++|+||||+| ||..|..+++.++++|++|+.+.++.
T Consensus 8 ~~~~~vlVTGa------------------tGfIG~~l~~~L~~~G~~V~~~~r~~ 44 (342)
T PLN02214 8 PAGKTVCVTGA------------------GGYIASWIVKILLERGYTVKGTVRNP 44 (342)
T ss_pred CCCCEEEEECC------------------CcHHHHHHHHHHHHCcCEEEEEeCCc
Confidence 56889999998 79999999999999999999988753
No 225
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.76 E-value=0.14 Score=44.13 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHHHCCC-eEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGY-AVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga-~V~~i~g~ 70 (289)
+|.+|..+|++++.+|+ .|+++.++
T Consensus 9 ~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 9 LGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp TSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred ccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 57799999999999997 56666665
No 226
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=93.72 E-value=0.12 Score=49.14 Aligned_cols=112 Identities=19% Similarity=0.245 Sum_probs=71.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccccc
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLK 125 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll~ 125 (289)
|...|.+.|++|++||.+|.+|.|..+- ++. + +.|+++ .|. -.-+...
T Consensus 58 TDGIGKayA~eLAkrG~nvvLIsRt~~K------------L~~----------v----~kEI~~---~~~---vev~~i~ 105 (312)
T KOG1014|consen 58 TDGIGKAYARELAKRGFNVVLISRTQEK------------LEA----------V----AKEIEE---KYK---VEVRIIA 105 (312)
T ss_pred CCcchHHHHHHHHHcCCEEEEEeCCHHH------------HHH----------H----HHHHHH---HhC---cEEEEEE
Confidence 5569999999999999999999986431 110 1 222322 121 2356777
Q ss_pred cccccHHH-HHHHHHHHHHHhhhcCCcchhhhhhhcCCCCCCcccccCCCcCCCCCCeeEEEEcccchhHHh
Q 022985 126 LPFTTIFE-YLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVL 196 (289)
Q Consensus 126 ~~f~t~~d-y~~~l~~i~~~~~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~~~l~l~L~~~Pkil~~i 196 (289)
+.|+.-.+ |...++.+. ..+..++|.++..+=.+| +..-+-...+-.+-++++..++.++-+.+
T Consensus 106 ~Dft~~~~~ye~i~~~l~-----~~~VgILVNNvG~~~~~P--~~f~~~~~~~~~~ii~vN~~~~~~~t~~i 170 (312)
T KOG1014|consen 106 IDFTKGDEVYEKLLEKLA-----GLDVGILVNNVGMSYDYP--ESFLKYPEGELQNIINVNILSVTLLTQLI 170 (312)
T ss_pred EecCCCchhHHHHHHHhc-----CCceEEEEecccccCCCc--HHHHhCchhhhhheeEEecchHHHHHHHh
Confidence 88888776 777777653 346678999999987663 33322222122345788888877766544
No 227
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=93.72 E-value=0.12 Score=43.76 Aligned_cols=28 Identities=29% Similarity=0.434 Sum_probs=25.8
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
.||..|..++++++++|++|+.+.|+.+
T Consensus 6 atG~vG~~l~~~L~~~~~~V~~~~R~~~ 33 (183)
T PF13460_consen 6 ATGFVGRALAKQLLRRGHEVTALVRSPS 33 (183)
T ss_dssp TTSHHHHHHHHHHHHTTSEEEEEESSGG
T ss_pred CCChHHHHHHHHHHHCCCEEEEEecCch
Confidence 3899999999999999999999999754
No 228
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.61 E-value=0.12 Score=45.85 Aligned_cols=33 Identities=9% Similarity=0.123 Sum_probs=29.4
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+|+||+| ||..|.++|+.++++|++|+++.+.
T Consensus 2 ~~vlItGa------------------s~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 2 KKILIIGA------------------TSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 68999998 4569999999999999999999874
No 229
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.56 E-value=0.13 Score=49.96 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=35.0
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
+...+++||||+| ||..|..++++++++|++|+.+.++.+
T Consensus 56 ~~~~~~kVLVtGa------------------tG~IG~~l~~~Ll~~G~~V~~l~R~~~ 95 (390)
T PLN02657 56 KEPKDVTVLVVGA------------------TGYIGKFVVRELVRRGYNVVAVAREKS 95 (390)
T ss_pred cCCCCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEEechh
Confidence 3457889999988 899999999999999999999998653
No 230
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=93.54 E-value=0.22 Score=43.77 Aligned_cols=32 Identities=28% Similarity=0.316 Sum_probs=24.5
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCC--eEEEEec
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY--AVIFLYR 69 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga--~V~~i~g 69 (289)
++||||+| |+| .|.++|+.|+++|+ .|+...+
T Consensus 1 ~~vlItGa-----------------s~g-IG~~ia~~l~~~~~~~~v~~~~~ 34 (235)
T PRK09009 1 MNILIVGG-----------------SGG-IGKAMVKQLLERYPDATVHATYR 34 (235)
T ss_pred CEEEEECC-----------------CCh-HHHHHHHHHHHhCCCCEEEEEcc
Confidence 47999998 555 99999999999964 4444443
No 231
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=93.50 E-value=0.11 Score=48.82 Aligned_cols=34 Identities=35% Similarity=0.538 Sum_probs=30.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|+||||+| ||-.|..+++.++++|++|+.+.+..
T Consensus 1 ~~vlVTGa------------------tGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGI------------------TGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcC------------------CCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 58999987 78999999999999999999998754
No 232
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.46 E-value=0.14 Score=45.98 Aligned_cols=38 Identities=24% Similarity=0.310 Sum_probs=33.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
...+++||||+| ||..|..+++.++++|++|+.+.++.
T Consensus 14 ~~~~~~ilItGa------------------sG~iG~~l~~~L~~~g~~V~~~~R~~ 51 (251)
T PLN00141 14 NVKTKTVFVAGA------------------TGRTGKRIVEQLLAKGFAVKAGVRDV 51 (251)
T ss_pred cccCCeEEEECC------------------CcHHHHHHHHHHHhCCCEEEEEecCH
Confidence 356789999997 78899999999999999999888754
No 233
>PLN02650 dihydroflavonol-4-reductase
Probab=93.32 E-value=0.14 Score=48.31 Aligned_cols=36 Identities=31% Similarity=0.453 Sum_probs=31.9
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.+|+||||+| ||..|..++++|+++|++|+.+.+..
T Consensus 4 ~~k~iLVTGa------------------tGfIGs~l~~~L~~~G~~V~~~~r~~ 39 (351)
T PLN02650 4 QKETVCVTGA------------------SGFIGSWLVMRLLERGYTVRATVRDP 39 (351)
T ss_pred CCCEEEEeCC------------------cHHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4578999998 89999999999999999999887653
No 234
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=93.27 E-value=0.14 Score=46.47 Aligned_cols=38 Identities=29% Similarity=0.424 Sum_probs=33.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
..|-.||||+| +|| .|.++|+.|.+.|-.|+.-.|+..
T Consensus 3 ~tgnTiLITGG-----------------~sG-IGl~lak~f~elgN~VIi~gR~e~ 40 (245)
T COG3967 3 TTGNTILITGG-----------------ASG-IGLALAKRFLELGNTVIICGRNEE 40 (245)
T ss_pred ccCcEEEEeCC-----------------cch-hhHHHHHHHHHhCCEEEEecCcHH
Confidence 56889999999 889 999999999999999998777643
No 235
>PLN02240 UDP-glucose 4-epimerase
Probab=93.21 E-value=0.15 Score=47.73 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.+|+||||+| ||..|..+++.++++|++|+.+.+
T Consensus 3 ~~~~~vlItGa------------------tG~iG~~l~~~L~~~g~~V~~~~~ 37 (352)
T PLN02240 3 LMGRTILVTGG------------------AGYIGSHTVLQLLLAGYKVVVIDN 37 (352)
T ss_pred CCCCEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeC
Confidence 56789999987 789999999999999999999864
No 236
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=93.09 E-value=0.17 Score=52.06 Aligned_cols=37 Identities=24% Similarity=0.411 Sum_probs=32.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
..||.||||+| +|..|.++++.|+++|++|+.+.++.
T Consensus 78 ~~gKvVLVTGA------------------TGgIG~aLAr~LLk~G~~Vval~Rn~ 114 (576)
T PLN03209 78 KDEDLAFVAGA------------------TGKVGSRTVRELLKLGFRVRAGVRSA 114 (576)
T ss_pred CCCCEEEEECC------------------CCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 46889999998 68899999999999999999998753
No 237
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.07 E-value=0.18 Score=47.66 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
...+++||||+| ||..|..+|++++++|++|+.+.++
T Consensus 7 ~~~~~~vLVtG~------------------~GfIG~~l~~~L~~~G~~V~~~~r~ 43 (353)
T PLN02896 7 ESATGTYCVTGA------------------TGYIGSWLVKLLLQRGYTVHATLRD 43 (353)
T ss_pred ccCCCEEEEECC------------------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457889999998 7899999999999999999988764
No 238
>CHL00194 ycf39 Ycf39; Provisional
Probab=92.83 E-value=0.17 Score=47.23 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=30.4
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+||||+| ||..|..++++++++|++|+.+.|+.
T Consensus 2 kIlVtGa------------------tG~iG~~lv~~Ll~~g~~V~~l~R~~ 34 (317)
T CHL00194 2 SLLVIGA------------------TGTLGRQIVRQALDEGYQVRCLVRNL 34 (317)
T ss_pred EEEEECC------------------CcHHHHHHHHHHHHCCCeEEEEEcCh
Confidence 6899987 99999999999999999999999864
No 239
>PRK08017 oxidoreductase; Provisional
Probab=92.65 E-value=0.2 Score=44.47 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=29.0
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+||||+| ||..|.++|+.++++|++|+++.++
T Consensus 3 k~vlVtGa------------------sg~IG~~la~~l~~~g~~v~~~~r~ 35 (256)
T PRK08017 3 KSVLITGC------------------SSGIGLEAALELKRRGYRVLAACRK 35 (256)
T ss_pred CEEEEECC------------------CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999998 4569999999999999999988765
No 240
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=92.64 E-value=0.27 Score=50.93 Aligned_cols=32 Identities=16% Similarity=0.033 Sum_probs=27.7
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEE
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 67 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i 67 (289)
..++||||+| ||..|..+++++..+|++|++.
T Consensus 379 ~~mkiLVtGa------------------~G~iG~~l~~~L~~~g~~v~~~ 410 (668)
T PLN02260 379 PSLKFLIYGR------------------TGWIGGLLGKLCEKQGIAYEYG 410 (668)
T ss_pred CCceEEEECC------------------CchHHHHHHHHHHhCCCeEEee
Confidence 4568999987 8999999999999999998643
No 241
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.64 E-value=0.19 Score=44.50 Aligned_cols=34 Identities=38% Similarity=0.323 Sum_probs=29.1
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+++|||+| ||..|.++|+.|+++|++|+++.++.
T Consensus 2 ~~vlItGa------------------sggiG~~ia~~l~~~G~~v~~~~r~~ 35 (243)
T PRK07023 2 VRAIVTGH------------------SRGLGAALAEQLLQPGIAVLGVARSR 35 (243)
T ss_pred ceEEEecC------------------CcchHHHHHHHHHhCCCEEEEEecCc
Confidence 36899998 45599999999999999999998753
No 242
>PRK05884 short chain dehydrogenase; Provisional
Probab=92.63 E-value=0.18 Score=44.60 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=27.9
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||+| |+| .|.++|+.|+++|++|+++.++
T Consensus 2 ~vlItGa-----------------s~g-iG~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 2 EVLVTGG-----------------DTD-LGRTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred eEEEEeC-----------------Cch-HHHHHHHHHHHCCCEEEEEeCC
Confidence 5889988 444 9999999999999999998764
No 243
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.55 E-value=0.2 Score=47.17 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCC--CeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~G--a~V~~i~g~ 70 (289)
+.||+||||+| ||..|.++++.|+++| ++|+++.+.
T Consensus 2 ~~~k~vLVTGa------------------tG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 2 FNNKSILITGG------------------TGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred cCCCEEEEeCC------------------CCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 46889999998 6889999999999997 789888754
No 244
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=92.52 E-value=0.21 Score=48.06 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=32.4
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+++||||+| ||..|..+++++.++|++|+.+.+.
T Consensus 20 ~~~~IlVtGg------------------tGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 20 EKLRICITGA------------------GGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCEEEEECC------------------ccHHHHHHHHHHHhCCCEEEEEEec
Confidence 6789999987 8999999999999999999999874
No 245
>PLN02427 UDP-apiose/xylose synthase
Probab=92.38 E-value=0.24 Score=47.50 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=34.3
Q ss_pred CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC-CCeEEEEecCC
Q 022985 14 DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRRG 71 (289)
Q Consensus 14 ~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~~ 71 (289)
.+..+.++||||+| ||..|..+++.|+++ |++|+.+.+..
T Consensus 9 ~~~~~~~~VlVTGg------------------tGfIGs~lv~~L~~~~g~~V~~l~r~~ 49 (386)
T PLN02427 9 GKPIKPLTICMIGA------------------GGFIGSHLCEKLMTETPHKVLALDVYN 49 (386)
T ss_pred CCcccCcEEEEECC------------------cchHHHHHHHHHHhcCCCEEEEEecCc
Confidence 34567789999998 899999999999998 59999887643
No 246
>PLN02206 UDP-glucuronate decarboxylase
Probab=92.25 E-value=0.24 Score=49.20 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=30.8
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++++||||+| ||..|..++++++++|++|+.+.+
T Consensus 118 ~~~kILVTGa------------------tGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 118 KGLRVVVTGG------------------AGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred CCCEEEEECc------------------ccHHHHHHHHHHHHCcCEEEEEeC
Confidence 5688999988 999999999999999999998864
No 247
>PLN00016 RNA-binding protein; Provisional
Probab=91.92 E-value=0.18 Score=48.36 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=33.4
Q ss_pred CCCcEEEEe---CCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVT---SGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLIT---aGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
...++|||| +| +||..|..++++|+++||+|+.+.+...
T Consensus 50 ~~~~~VLVt~~~~G-----------------atG~iG~~lv~~L~~~G~~V~~l~R~~~ 91 (378)
T PLN00016 50 VEKKKVLIVNTNSG-----------------GHAFIGFYLAKELVKAGHEVTLFTRGKE 91 (378)
T ss_pred cccceEEEEeccCC-----------------CceeEhHHHHHHHHHCCCEEEEEecCCc
Confidence 345789999 44 5999999999999999999999998654
No 248
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=91.59 E-value=0.54 Score=40.87 Aligned_cols=37 Identities=24% Similarity=0.350 Sum_probs=33.2
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.+++++|.+| +|..|.++|+.+.+.|++|+++.++
T Consensus 25 ~l~~~~vlVlGg------------------tG~iG~~~a~~l~~~g~~V~l~~R~ 61 (194)
T cd01078 25 DLKGKTAVVLGG------------------TGPVGQRAAVLLAREGARVVLVGRD 61 (194)
T ss_pred CCCCCEEEEECC------------------CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 578899999988 6889999999999999999999764
No 249
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=91.59 E-value=0.17 Score=45.15 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=28.2
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.||+-|..|++++.+|||+||-|.|+.+..|
T Consensus 8 AsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~ 38 (211)
T COG2910 8 ASGKAGSRILKEALKRGHEVTAIVRNASKLA 38 (211)
T ss_pred cCchhHHHHHHHHHhCCCeeEEEEeChHhcc
Confidence 6999999999999999999999999877554
No 250
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=91.54 E-value=0.25 Score=47.41 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=35.5
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|+|+||+|||=-.|= .|.++|+++.++||+|.|+.++..
T Consensus 2 ~~i~~~~GGTGGHi~--------------Pala~a~~l~~~g~~v~~vg~~~~ 40 (352)
T PRK12446 2 KKIVFTGGGSAGHVT--------------PNLAIIPYLKEDNWDISYIGSHQG 40 (352)
T ss_pred CeEEEEcCCcHHHHH--------------HHHHHHHHHHhCCCEEEEEECCCc
Confidence 589999999999888 799999999999999999987654
No 251
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=91.40 E-value=0.25 Score=44.74 Aligned_cols=25 Identities=24% Similarity=0.317 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
||..|..++++|+++|++|+.+.+.
T Consensus 8 tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 8 NGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 7999999999999999999999875
No 252
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=91.27 E-value=0.18 Score=40.83 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=27.8
Q ss_pred EEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 22 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 22 VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|||++|||.-.+= -..++|+++.++||+|++...+
T Consensus 1 Ili~~~Gt~Ghv~--------------P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHVY--------------PFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHHH--------------HHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHHH--------------HHHHHHHHHhccCCeEEEeecc
Confidence 6778887777666 5789999999999999977753
No 253
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=91.26 E-value=0.28 Score=44.76 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
||..|..++++++++|++|+.+.|+.+
T Consensus 8 tG~iG~~vv~~L~~~g~~V~~~~R~~~ 34 (285)
T TIGR03649 8 TGKTASRIARLLQAASVPFLVASRSSS 34 (285)
T ss_pred CChHHHHHHHHHHhCCCcEEEEeCCCc
Confidence 999999999999999999999998754
No 254
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=91.24 E-value=0.42 Score=47.89 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=49.7
Q ss_pred CCCCcEEEEeCCCccc-----ccCCCCeeeEcccc---------------hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 16 EGTRRVACVTSGGTTV-----PLEQRCVRYIDNFS---------------SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e-----~ID~~~VR~IsN~S---------------SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.+..++|+|.+|+..- ++| ..|+++|.. .|-.|.++|..|.+.|.+||+|.+...++|
T Consensus 133 ~~~a~~iiIATGS~p~~~~~~~~~--~~~~~~s~~~l~~~~lP~~lvIiGgG~IGlE~a~~~~~LG~~VTiie~~~~iLp 210 (454)
T COG1249 133 TITADNIIIATGSRPRIPPGPGID--GARILDSSDALFLLELPKSLVIVGGGYIGLEFASVFAALGSKVTVVERGDRILP 210 (454)
T ss_pred EEEeCEEEEcCCCCCcCCCCCCCC--CCeEEechhhcccccCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCCCC
Confidence 3567899999998754 478 899999855 799999999999999999999999877766
No 255
>PRK06953 short chain dehydrogenase; Provisional
Probab=90.92 E-value=0.37 Score=42.17 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=28.8
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|++|||+| | |..|..+|++++++|++|+++.++
T Consensus 2 ~~vlvtG~-----------------s-g~iG~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 2 KTVLIVGA-----------------S-RGIGREFVRQYRADGWRVIATARD 34 (222)
T ss_pred ceEEEEcC-----------------C-CchhHHHHHHHHhCCCEEEEEECC
Confidence 57899998 4 559999999999999999998765
No 256
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=90.87 E-value=0.44 Score=40.76 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=31.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
++.||+|||-+| |+.|...|+.++..|++|++|.
T Consensus 10 ~l~~~~vlVvGG-------------------G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIGG-------------------GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcCCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEEc
Confidence 589999999999 8899999999999999999994
No 257
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=90.86 E-value=0.46 Score=41.32 Aligned_cols=27 Identities=37% Similarity=0.534 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
||..|.+++++++++|+.|+.+.+...
T Consensus 7 tG~iG~~l~~~l~~~g~~v~~~~~~~~ 33 (236)
T PF01370_consen 7 TGFIGSALVRQLLKKGHEVIVLSRSSN 33 (236)
T ss_dssp TSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred CCHHHHHHHHHHHHcCCcccccccccc
Confidence 899999999999999999998887544
No 258
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=90.59 E-value=0.52 Score=41.94 Aligned_cols=35 Identities=14% Similarity=0.322 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++.||+|||-+| |.+|...|+.++..|++|+++..
T Consensus 7 ~l~~k~vLVIGg-------------------G~va~~ka~~Ll~~ga~V~VIs~ 41 (202)
T PRK06718 7 DLSNKRVVIVGG-------------------GKVAGRRAITLLKYGAHIVVISP 41 (202)
T ss_pred EcCCCEEEEECC-------------------CHHHHHHHHHHHHCCCeEEEEcC
Confidence 578999999999 88999999999999999999974
No 259
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=90.17 E-value=0.52 Score=46.70 Aligned_cols=35 Identities=31% Similarity=0.382 Sum_probs=31.0
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.++||||+| ||..|..++++++++|++|+.+.+.
T Consensus 119 ~~mkILVTGa------------------tGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 119 KRLRIVVTGG------------------AGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred CCCEEEEECC------------------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999998 8999999999999999999998754
No 260
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=89.93 E-value=1 Score=39.97 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=30.9
Q ss_pred CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEE
Q 022985 14 DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFL 67 (289)
Q Consensus 14 ~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i 67 (289)
..++.||+|+|++. |++|..+|+.+.+.|++|+..
T Consensus 23 ~~~l~gk~v~I~G~-------------------G~vG~~~A~~L~~~G~~Vvv~ 57 (200)
T cd01075 23 TDSLEGKTVAVQGL-------------------GKVGYKLAEHLLEEGAKLIVA 57 (200)
T ss_pred CCCCCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEE
Confidence 45689999999987 789999999999999999954
No 261
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=89.93 E-value=0.43 Score=44.84 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=28.3
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+||||+| ||..|.++++.|+++|++|+.+.+.
T Consensus 2 ~~vlVtGa------------------tGfIG~~l~~~L~~~g~~~v~~~~~ 34 (355)
T PRK10217 2 RKILITGG------------------AGFIGSALVRYIINETSDAVVVVDK 34 (355)
T ss_pred cEEEEEcC------------------CcHHHHHHHHHHHHcCCCEEEEEec
Confidence 57999998 8899999999999999987766543
No 262
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=89.91 E-value=1.4 Score=52.67 Aligned_cols=37 Identities=19% Similarity=0.071 Sum_probs=26.8
Q ss_pred cCCCCeeeEcccchhHHHHHHHHHHHHC-CCeEEEEecC
Q 022985 33 LEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 70 (289)
Q Consensus 33 ID~~~VR~IsN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 70 (289)
|+++.|=.||=-++| .|.++|++|+++ |+.|+++.++
T Consensus 1994 l~~g~vvLVTGGarG-IG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKG-VTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred cCCCCEEEEeCCCCH-HHHHHHHHHHHhcCCEEEEEeCC
Confidence 333334444444777 999999999998 6999988765
No 263
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=89.64 E-value=0.27 Score=44.87 Aligned_cols=24 Identities=25% Similarity=0.425 Sum_probs=21.4
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEe
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
.||..|..++++|+++|++|+++.
T Consensus 5 a~GfiG~~l~~~L~~~g~~v~~~~ 28 (306)
T PLN02725 5 HRGLVGSAIVRKLEALGFTNLVLR 28 (306)
T ss_pred CCCcccHHHHHHHHhCCCcEEEee
Confidence 389999999999999999988664
No 264
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=89.38 E-value=0.63 Score=43.26 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=28.5
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+||||+| ||..|..+|+.|+++|++|+++.+.
T Consensus 2 ~vlVtGa------------------tG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 2 RVLVTGG------------------SGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred eEEEECC------------------CChHHHHHHHHHHHCCCeEEEEecC
Confidence 6899977 7999999999999999999998643
No 265
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.32 E-value=1.5 Score=39.06 Aligned_cols=38 Identities=39% Similarity=0.437 Sum_probs=32.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
-+|-..|||+| .|| .|.+-||.+.+.|+.|.++-=|.|
T Consensus 7 ~kglvalvtgg-----------------asg-lg~ataerlakqgasv~lldlp~s 44 (260)
T KOG1199|consen 7 TKGLVALVTGG-----------------ASG-LGKATAERLAKQGASVALLDLPQS 44 (260)
T ss_pred hcCeeEEeecC-----------------ccc-ccHHHHHHHHhcCceEEEEeCCcc
Confidence 56778899999 788 999999999999999999875433
No 266
>PRK08219 short chain dehydrogenase; Provisional
Probab=89.20 E-value=0.58 Score=40.49 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=29.5
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|++|||+| ||..|..+|+.++++ ++|+.+.++
T Consensus 3 ~~~vlVtG~------------------~g~iG~~l~~~l~~~-~~V~~~~r~ 35 (227)
T PRK08219 3 RPTALITGA------------------SRGIGAAIARELAPT-HTLLLGGRP 35 (227)
T ss_pred CCEEEEecC------------------CcHHHHHHHHHHHhh-CCEEEEeCC
Confidence 478999998 577999999999999 999999875
No 267
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=89.10 E-value=0.64 Score=42.28 Aligned_cols=34 Identities=32% Similarity=0.306 Sum_probs=30.6
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
+||||+| ||..|..+++.|+++|++|..+.+...
T Consensus 2 ~ILVtG~------------------tGfiG~~l~~~L~~~g~~V~~~~r~~~ 35 (314)
T COG0451 2 RILVTGG------------------AGFIGSHLVERLLAAGHDVRGLDRLRD 35 (314)
T ss_pred eEEEEcC------------------cccHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 4899988 899999999999999999999998544
No 268
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=89.10 E-value=0.42 Score=37.72 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=31.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||+|||.+| |..|..=++.+++.|++|++++..
T Consensus 4 ~l~~~~vlVvGg-------------------G~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 4 DLKGKRVLVVGG-------------------GPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp --TT-EEEEEEE-------------------SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred EcCCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEECCc
Confidence 478999999999 789999999999999999999965
No 269
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=88.97 E-value=0.6 Score=42.99 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
||..|..+++.++++|++|+++.++.
T Consensus 8 ~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 8 AGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred CcHHHHHHHHHHHhCCCceEEEecCC
Confidence 89999999999999999888887653
No 270
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=88.82 E-value=0.7 Score=45.29 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=31.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++|+|+||+| |+.|.++|+.++++||+|+++...
T Consensus 3 ~~~k~v~iiG~-------------------g~~G~~~A~~l~~~G~~V~~~d~~ 37 (450)
T PRK14106 3 LKGKKVLVVGA-------------------GVSGLALAKFLKKLGAKVILTDEK 37 (450)
T ss_pred cCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999987 558999999999999999998764
No 271
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=88.78 E-value=0.62 Score=41.99 Aligned_cols=27 Identities=37% Similarity=0.416 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
||..|..+++.|+++|++|+.+.++..
T Consensus 7 tG~iG~~l~~~L~~~g~~V~~~~r~~~ 33 (292)
T TIGR01777 7 TGFIGRALTQRLTKDGHEVTILTRSPP 33 (292)
T ss_pred cchhhHHHHHHHHHcCCEEEEEeCCCC
Confidence 899999999999999999999998654
No 272
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=88.55 E-value=0.71 Score=41.34 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=27.5
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHH----CCCeEEEEecC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIK----MGYAVIFLYRR 70 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~----~Ga~V~~i~g~ 70 (289)
.||||+| |+| .|.++|+.|++ .|+.|+++.++
T Consensus 2 ~vlItGa-----------------s~G-IG~~~a~~la~~~~~~g~~V~~~~r~ 37 (256)
T TIGR01500 2 VCLVTGA-----------------SRG-FGRTIAQELAKCLKSPGSVLVLSARN 37 (256)
T ss_pred EEEEecC-----------------CCc-hHHHHHHHHHHhhccCCcEEEEEEcC
Confidence 5788888 666 99999999997 79999999874
No 273
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=88.49 E-value=0.7 Score=43.52 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=21.7
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++|+.|.+|++.+. .+++|+.+.++
T Consensus 8 ~~GqLG~~L~~~l~-~~~~v~a~~~~ 32 (281)
T COG1091 8 ANGQLGTELRRALP-GEFEVIATDRA 32 (281)
T ss_pred CCChHHHHHHHHhC-CCceEEeccCc
Confidence 38999999999998 77999988764
No 274
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=87.32 E-value=0.041 Score=54.03 Aligned_cols=215 Identities=18% Similarity=0.113 Sum_probs=116.9
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEE-
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQ- 98 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~- 98 (289)
..+++++++|...|.+..+++.+|.+|+..+++.+..+..-+.++..+..+....+..+..+ .+...+... .+...
T Consensus 80 adl~lvaPaTan~i~Kla~g~aD~~~t~~~~a~~~p~~~aPamn~~M~~~~~tq~n~~~l~~--~g~~~I~p~-~~~~a~ 156 (392)
T COG0452 80 ADLLLVAPATANTIAKLAVGIADNLSTTTLLAAKAPLVLAPAMNVIMYTHPATQENLQRLKS--EGVLFIEPI-EGELAD 156 (392)
T ss_pred cCEEEecCCChhHHHHHHHhhhccHHHHHHHHhcCcEEEecCcCHHHhhCHHHHHHHHHHHH--CCcEEECcc-cccccc
Confidence 57999999999999988899999999999999888655555555555554432222110000 011111110 00000
Q ss_pred ---EeCccHHHHHHHHHH-HHHhhhcccccccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhc---CCCCCCccccc
Q 022985 99 ---VCQPYSEAVKRAIRD-HHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAV---SDFYVPWKSMA 171 (289)
Q Consensus 99 ---v~~~~~~~~~~a~~~-~~~~~~~~~ll~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAV---sDf~v~~~~~~ 171 (289)
-.-...+++...+.+ +...--.++-.++......||..-.+.+.... .+..+..+..||. ++... .....
T Consensus 157 ~g~g~~~e~~~Iv~~~~~~~~~~~l~gk~Vlit~G~t~E~idpvr~itn~s--sGk~g~alA~a~~~~GA~V~l-v~g~~ 233 (392)
T COG0452 157 VGDGRLAEPEEIVEAALALLKTPDLKGKKVLITAGPTREYIDPVRFISNRS--SGKMGFALAAAAKRRGASVTL-VSGPT 233 (392)
T ss_pred cccccCCCHHHHHHHHHhhcccccccCcEEEecCCCCccCCccceeeeccc--cccccHHHHHHHHHcCCceEE-ecCCC
Confidence 000013334333222 21111257778888899999988888776433 2444534444433 33332 01111
Q ss_pred CCCcCCCCC-----------------CeeEEEEcccchhHHhhcccCCCeeEEE----EeeccCc-hHHHHHHHHHHHhc
Q 022985 172 EHKIQSGSG-----------------PLDMQLLQVPKMLSVLRKEWAPMAFCIS----FKLETDA-EILLEKADMARKKY 229 (289)
Q Consensus 172 ~~KI~s~~~-----------------~l~l~L~~~Pkil~~i~~~~~p~~~~Vg----FklEt~~-e~li~~A~~kL~~k 229 (289)
..++.+... .....+...+..++..+..|.+...+.+ |++|... +.++.........+
T Consensus 234 ~~~~p~~v~~v~v~sa~em~~av~~~~~~~d~~i~~aAvaD~~~~~~~~~Kikk~~~~~~l~l~~n~dil~~~~~~~~~~ 313 (392)
T COG0452 234 SLKIPAGVEVVKVESAEEMLNAVLEAALPADIFISAAAVADYRPKWVAEAKIKKQGEPFKLELVPNPDILASVARDYPKK 313 (392)
T ss_pred cCCCCCcceeeeeeeHHHHHHHHHhcccccCEEEEeccccccccccccccceeecCCcceEEeccChhHHHHHHhhccCC
Confidence 224444322 1224455667777766666777788888 9999886 34555555443333
Q ss_pred CCcEEEEecCC
Q 022985 230 GMHAVVANELL 240 (289)
Q Consensus 230 ~~D~VvaN~l~ 240 (289)
...+..+....
T Consensus 314 ~~~Vgfaaet~ 324 (392)
T COG0452 314 NILVGFAAETG 324 (392)
T ss_pred CeEEEEeccch
Confidence 43444555554
No 275
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=87.14 E-value=0.96 Score=42.55 Aligned_cols=33 Identities=9% Similarity=0.178 Sum_probs=29.2
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC-CCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 70 (289)
++||||+| ||..|..++++++++ |++|+.+.+.
T Consensus 2 ~~ilVtGa------------------tGfiGs~l~~~L~~~~~~~V~~~~r~ 35 (347)
T PRK11908 2 KKVLILGV------------------NGFIGHHLSKRILETTDWEVYGMDMQ 35 (347)
T ss_pred cEEEEECC------------------CcHHHHHHHHHHHhCCCCeEEEEeCc
Confidence 47999998 899999999999987 7999998764
No 276
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=87.12 E-value=2 Score=37.31 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=32.2
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHH-HHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHR-GAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~-G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.++.||+|||.+. |.| |..+|+.|.++|+.|+++.+.
T Consensus 40 ~~l~gk~vlViG~-------------------G~~~G~~~a~~L~~~g~~V~v~~r~ 77 (168)
T cd01080 40 IDLAGKKVVVVGR-------------------SNIVGKPLAALLLNRNATVTVCHSK 77 (168)
T ss_pred CCCCCCEEEEECC-------------------cHHHHHHHHHHHhhCCCEEEEEECC
Confidence 3689999999987 666 888999999999999988864
No 277
>PRK08309 short chain dehydrogenase; Provisional
Probab=87.01 E-value=1.2 Score=38.88 Aligned_cols=32 Identities=28% Similarity=0.316 Sum_probs=26.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++++||+| | | +|.++++.|.++||+|+++.++
T Consensus 1 m~vlVtGG-----------------t-G-~gg~la~~L~~~G~~V~v~~R~ 32 (177)
T PRK08309 1 MHALVIGG-----------------T-G-MLKRVSLWLCEKGFHVSVIARR 32 (177)
T ss_pred CEEEEECc-----------------C-H-HHHHHHHHHHHCcCEEEEEECC
Confidence 36889988 5 7 6667999999999999998764
No 278
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.98 E-value=1.7 Score=38.75 Aligned_cols=38 Identities=26% Similarity=0.246 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.+.|++|++|+- --| .|.++...+.+.|+.|+-++|+.
T Consensus 4 ~laG~~vlvTga-----------------gaG-IG~~~v~~La~aGA~ViAvaR~~ 41 (245)
T KOG1207|consen 4 SLAGVIVLVTGA-----------------GAG-IGKEIVLSLAKAGAQVIAVARNE 41 (245)
T ss_pred cccceEEEeecc-----------------ccc-ccHHHHHHHHhcCCEEEEEecCH
Confidence 478999999984 234 79999999999999999999874
No 279
>PRK07041 short chain dehydrogenase; Provisional
Probab=86.69 E-value=0.79 Score=39.99 Aligned_cols=25 Identities=24% Similarity=0.169 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
||..|.++|+.++++|++|+++.++
T Consensus 6 s~~iG~~~a~~l~~~G~~v~~~~r~ 30 (230)
T PRK07041 6 SSGIGLALARAFAAEGARVTIASRS 30 (230)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4569999999999999999999874
No 280
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.13 E-value=1.7 Score=41.36 Aligned_cols=47 Identities=19% Similarity=0.207 Sum_probs=37.7
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|.|-+. ||.||.-+|..++++||.|+++|+.
T Consensus 145 aii~lL~~~~i~l~Gk~V~vIG~------------------s~ivG~PmA~~L~~~gatVtv~~~~ 192 (301)
T PRK14194 145 GCLRLLEDTCGDLTGKHAVVIGR------------------SNIVGKPMAALLLQAHCSVTVVHSR 192 (301)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEECCC
Confidence 45556653 24688999999654 6789999999999999999999864
No 281
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=86.12 E-value=1.7 Score=33.18 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=24.9
Q ss_pred HhhccCCCCCC-cEEEEeCCCcccccCCCCeeeEcccchhHHHHH--HHHHHHHCCCeEEEEe
Q 022985 9 AFFKCDYEGTR-RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAA--STEHLIKMGYAVIFLY 68 (289)
Q Consensus 9 ~~~~~~~~~~~-k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~--iAe~~~~~Ga~V~~i~ 68 (289)
+..+......| |+|||+++ ||| .|.+ ||-+| ..|++.+=|+
T Consensus 28 ~yvk~~~~~~GpK~VLViGa-----------------StG-yGLAsRIa~aF-g~gA~TiGV~ 71 (78)
T PF12242_consen 28 EYVKSQGKINGPKKVLVIGA-----------------STG-YGLASRIAAAF-GAGADTIGVS 71 (78)
T ss_dssp HHHHHC---TS-SEEEEES------------------SSH-HHHHHHHHHHH-CC--EEEEEE
T ss_pred HHHHhcCCCCCCceEEEEec-----------------CCc-ccHHHHHHHHh-cCCCCEEEEe
Confidence 33443344566 99999999 999 7877 56666 6788877665
No 282
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=86.03 E-value=0.89 Score=43.09 Aligned_cols=30 Identities=27% Similarity=0.458 Sum_probs=24.4
Q ss_pred EEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe-EEEEec
Q 022985 22 ACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYR 69 (289)
Q Consensus 22 VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~-V~~i~g 69 (289)
||||+| +|..|..+++.+++.|.. ++++-+
T Consensus 1 VLVTGa------------------~GSIGseL~rql~~~~p~~lil~d~ 31 (293)
T PF02719_consen 1 VLVTGA------------------GGSIGSELVRQLLRYGPKKLILFDR 31 (293)
T ss_dssp EEEETT------------------TSHHHHHHHHHHHCCB-SEEEEEES
T ss_pred CEEEcc------------------ccHHHHHHHHHHHhcCCCeEEEeCC
Confidence 789998 799999999999999964 555554
No 283
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=85.97 E-value=1.2 Score=39.40 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
||..|..+++++++.|+.|+.+.|+.
T Consensus 7 tG~~G~~v~~~L~~~~~~V~~l~R~~ 32 (233)
T PF05368_consen 7 TGNQGRSVVRALLSAGFSVRALVRDP 32 (233)
T ss_dssp TSHHHHHHHHHHHHTTGCEEEEESSS
T ss_pred ccHHHHHHHHHHHhCCCCcEEEEecc
Confidence 89999999999999999999999975
No 284
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=85.52 E-value=0.27 Score=44.39 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=23.4
Q ss_pred chhHHHHHHHHHHHHCCC--eEEEEecCCC
Q 022985 45 SSGHRGAASTEHLIKMGY--AVIFLYRRGT 72 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga--~V~~i~g~~s 72 (289)
+||-.|..+.+.+++.+. .|+++.|..+
T Consensus 4 aTGflG~~ll~~Ll~~~~~~~I~cLvR~~~ 33 (249)
T PF07993_consen 4 ATGFLGSHLLEELLRQPPDVKIYCLVRASS 33 (249)
T ss_dssp TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEEEEeCcc
Confidence 699999999999999997 8999998653
No 285
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=85.35 E-value=1.3 Score=40.32 Aligned_cols=24 Identities=25% Similarity=0.448 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
||..|..+++.|+++|++|+.+.+
T Consensus 8 tG~iG~~l~~~l~~~g~~V~~~~~ 31 (328)
T TIGR01179 8 AGYIGSHTVRQLLESGHEVVVLDN 31 (328)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeC
Confidence 889999999999999999987754
No 286
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=85.17 E-value=1.3 Score=40.99 Aligned_cols=27 Identities=33% Similarity=0.426 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHHCC--CeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIKMG--YAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~~G--a~V~~i~g~~s 72 (289)
||..|..+++.++++| +.|+++.+..+
T Consensus 8 tG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 8 TGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred chHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 8999999999999999 77999987543
No 287
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=84.80 E-value=2.5 Score=39.89 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=38.0
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..++.. .-++.||+|+|.+. |+..|.-+|..+..+|+.|+.+|+.
T Consensus 144 ai~~ll~~~~i~l~Gk~vvVIGr------------------s~~VG~pla~lL~~~gatVtv~~s~ 191 (286)
T PRK14175 144 GIMEILKHADIDLEGKNAVVIGR------------------SHIVGQPVSKLLLQKNASVTILHSR 191 (286)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CchhHHHHHHHHHHCCCeEEEEeCC
Confidence 34555553 23689999999987 5669999999999999999999963
No 288
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=84.61 E-value=2 Score=38.32 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=32.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||+|||-+| |..|..-++.|++.|+.|+++...
T Consensus 6 ~l~gk~vlVvGg-------------------G~va~rk~~~Ll~~ga~VtVvsp~ 41 (205)
T TIGR01470 6 NLEGRAVLVVGG-------------------GDVALRKARLLLKAGAQLRVIAEE 41 (205)
T ss_pred EcCCCeEEEECc-------------------CHHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999999999 789999999999999999999854
No 289
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=84.42 E-value=1.2 Score=40.40 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHHHCC--CeEEEEec
Q 022985 46 SGHRGAASTEHLIKMG--YAVIFLYR 69 (289)
Q Consensus 46 SG~~G~~iAe~~~~~G--a~V~~i~g 69 (289)
||..|.++++.++++| ++|+.+.+
T Consensus 8 tG~iG~~l~~~l~~~~~~~~v~~~~~ 33 (317)
T TIGR01181 8 AGFIGSNFVRYILNEHPDAEVIVLDK 33 (317)
T ss_pred CchHHHHHHHHHHHhCCCCEEEEecC
Confidence 8999999999999998 78988865
No 290
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=84.34 E-value=1.4 Score=40.76 Aligned_cols=38 Identities=29% Similarity=0.391 Sum_probs=28.8
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++|+|++||+.-.+. ....+|+++.++||+|+++.++.
T Consensus 1 ~~i~~~~g~~~g~~~--------------~~~~La~~L~~~g~eV~vv~~~~ 38 (348)
T TIGR01133 1 KKVVLAAGGTGGHIF--------------PALAVAEELIKRGVEVLWLGTKR 38 (348)
T ss_pred CeEEEEeCccHHHHh--------------HHHHHHHHHHhCCCEEEEEeCCC
Confidence 368888887643333 34589999999999999998754
No 291
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.04 E-value=2.7 Score=41.15 Aligned_cols=27 Identities=30% Similarity=0.301 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHH-CCCeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIK-MGYAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~-~Ga~V~~i~g~~s 72 (289)
||-+|+.+..+++. +-++|+++.|-.+
T Consensus 9 TGFLG~yLl~eLL~~~~~kv~cLVRA~s 36 (382)
T COG3320 9 TGFLGAYLLLELLDRSDAKVICLVRAQS 36 (382)
T ss_pred chHhHHHHHHHHHhcCCCcEEEEEecCC
Confidence 99999887777666 4569999998655
No 292
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=83.50 E-value=1.6 Score=38.80 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=32.0
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
.+||||+| ||..|..++++++++|++|..+.++...
T Consensus 1 ~~ilV~Ga------------------tG~~G~~~~~~L~~~~~~v~~~~r~~~~ 36 (275)
T COG0702 1 MKILVTGA------------------TGFVGGAVVRELLARGHEVRAAVRNPEA 36 (275)
T ss_pred CeEEEEec------------------ccchHHHHHHHHHhCCCEEEEEEeCHHH
Confidence 36888887 9999999999999999999999998553
No 293
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=82.73 E-value=2 Score=42.03 Aligned_cols=34 Identities=21% Similarity=0.107 Sum_probs=29.6
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+.||+|+||++ |+.|.++|+.|+++|+.|++.-.
T Consensus 3 ~~~k~v~v~G~-------------------g~~G~s~a~~l~~~G~~V~~~d~ 36 (447)
T PRK02472 3 YQNKKVLVLGL-------------------AKSGYAAAKLLHKLGANVTVNDG 36 (447)
T ss_pred cCCCEEEEEee-------------------CHHHHHHHHHHHHCCCEEEEEcC
Confidence 56889999998 45899999999999999998754
No 294
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=82.62 E-value=2.4 Score=31.34 Aligned_cols=29 Identities=24% Similarity=0.327 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCE 74 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~ 74 (289)
.|-.|..+|.++..+|.+|+++++.....
T Consensus 7 gG~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 7 GGFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 37899999999999999999999876543
No 295
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=82.45 E-value=1.6 Score=41.27 Aligned_cols=27 Identities=41% Similarity=0.402 Sum_probs=25.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
||-.|.+|...+.+.||+|+.+.|+..
T Consensus 7 TGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 7 TGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred ccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 999999999999999999999999753
No 296
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=82.30 E-value=3.5 Score=39.29 Aligned_cols=37 Identities=32% Similarity=0.487 Sum_probs=32.6
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
+|+.|||+ =||+-|+-||+.++.+||+|.=+.|..+.
T Consensus 2 ~K~ALITG------------------ITGQDGsYLa~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 2 GKVALITG------------------ITGQDGSYLAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred CceEEEec------------------ccCCchHHHHHHHHhcCcEEEEEeecccc
Confidence 57888886 48999999999999999999999998664
No 297
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=82.29 E-value=1.5 Score=38.12 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=21.6
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|.||..||..|+..|++|+++-.+
T Consensus 7 aG~mG~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 7 AGTMGRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEE-SS
T ss_pred CCHHHHHHHHHHHhCCCcEEEEECC
Confidence 5999999999999999999999853
No 298
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.20 E-value=3.4 Score=39.23 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=36.5
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|..+|.. .-++.||+|+|-+ -||.||..+|..++++||.|++.|.
T Consensus 144 ai~~ll~~~~i~~~Gk~V~viG------------------rs~~mG~PmA~~L~~~g~tVtv~~~ 190 (296)
T PRK14188 144 GCMMLLRRVHGDLSGLNAVVIG------------------RSNLVGKPMAQLLLAANATVTIAHS 190 (296)
T ss_pred HHHHHHHHhCCCCCCCEEEEEc------------------CCcchHHHHHHHHHhCCCEEEEECC
Confidence 44556653 2357899999955 3789999999999999999999974
No 299
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=81.91 E-value=2.1 Score=40.12 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=25.6
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
+||||+| ||..|..+++.++++|+.+.+..
T Consensus 2 kilITGg------------------tG~iG~~l~~~L~~~g~~~v~~~ 31 (352)
T PRK10084 2 KILVTGG------------------AGFIGSAVVRHIINNTQDSVVNV 31 (352)
T ss_pred eEEEECC------------------CcHHhHHHHHHHHHhCCCeEEEe
Confidence 6999998 88899999999999998754443
No 300
>PRK12320 hypothetical protein; Provisional
Probab=81.81 E-value=2.1 Score=45.27 Aligned_cols=32 Identities=28% Similarity=0.310 Sum_probs=29.6
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+||||+| ||..|..+++.++++|++|+.+.+.
T Consensus 2 kILVTGA------------------aGFIGs~La~~Ll~~G~~Vi~ldr~ 33 (699)
T PRK12320 2 QILVTDA------------------TGAVGRSVTRQLIAAGHTVSGIAQH 33 (699)
T ss_pred EEEEECC------------------CCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6999998 8999999999999999999998864
No 301
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=81.03 E-value=2.2 Score=38.67 Aligned_cols=38 Identities=37% Similarity=0.337 Sum_probs=33.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
+..|..+||+| ||| .|.++|..+.+.||.|.+...+.+
T Consensus 12 ~~sk~~~vtGg-----------------~sG-IGrAia~~la~~Garv~v~dl~~~ 49 (256)
T KOG1200|consen 12 LMSKVAAVTGG-----------------SSG-IGRAIAQLLAKKGARVAVADLDSA 49 (256)
T ss_pred HhcceeEEecC-----------------Cch-HHHHHHHHHHhcCcEEEEeecchh
Confidence 56688999999 999 999999999999999999987654
No 302
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=80.80 E-value=2.8 Score=43.51 Aligned_cols=36 Identities=17% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC--CCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM--GYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~--Ga~V~~i~g 69 (289)
..+.|+||||+| ||..|..+++.++++ |++|+.+.+
T Consensus 3 ~~~~~~VLVTGa------------------tGfIG~~lv~~Ll~~g~~~~V~~~d~ 40 (668)
T PLN02260 3 TYEPKNILITGA------------------AGFIASHVANRLIRNYPDYKIVVLDK 40 (668)
T ss_pred CCCCCEEEEECC------------------CcHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 356789999998 899999999999998 678877764
No 303
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=80.76 E-value=3.2 Score=39.22 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=36.5
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|..+|.. .-++.||+|+|-+. ||.||.-+|..++++||.|++.|.
T Consensus 144 avi~lL~~~~i~l~Gk~v~vIG~------------------S~ivG~Pla~lL~~~gatVtv~~s 190 (284)
T PRK14179 144 GIMEMFREYNVELEGKHAVVIGR------------------SNIVGKPMAQLLLDKNATVTLTHS 190 (284)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcCcHHHHHHHHHCCCEEEEECC
Confidence 34555542 23589999999654 899999999999999999999864
No 304
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=80.26 E-value=1.9 Score=41.52 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=29.7
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
+++||||+| .|..|...+-+++++||.|+.|-.
T Consensus 2 ~~~VLVtGg------------------aGyiGsht~l~L~~~gy~v~~vDN 34 (343)
T KOG1371|consen 2 GKHVLVTGG------------------AGYIGSHTVLALLKRGYGVVIVDN 34 (343)
T ss_pred CcEEEEecC------------------CcceehHHHHHHHhCCCcEEEEec
Confidence 579999999 588999999999999999999874
No 305
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=79.68 E-value=2.8 Score=40.14 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=29.8
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++||||+| .|..|...+.++++.|++|+++-.-
T Consensus 1 ~~iLVtGG------------------AGYIGSHtv~~Ll~~G~~vvV~DNL 33 (329)
T COG1087 1 MKVLVTGG------------------AGYIGSHTVRQLLKTGHEVVVLDNL 33 (329)
T ss_pred CeEEEecC------------------cchhHHHHHHHHHHCCCeEEEEecC
Confidence 47999999 6999999999999999999998753
No 306
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=79.62 E-value=2.4 Score=38.69 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHCCC-eEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGY-AVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga-~V~~i~g~ 70 (289)
||..|..+++.|.++|+ +|+.+.++
T Consensus 7 tG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 7 AGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred cchhhHHHHHHHHHcCCceEEEEecC
Confidence 89999999999999998 67766543
No 307
>PRK14982 acyl-ACP reductase; Provisional
Probab=79.50 E-value=3.3 Score=40.01 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=30.5
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC-C-CeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-G-YAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~-G-a~V~~i~g 69 (289)
++.+|+|+||++ +|.+|..+|+.++.+ | .+|+++.+
T Consensus 152 ~l~~k~VLVtGA------------------tG~IGs~lar~L~~~~gv~~lilv~R 189 (340)
T PRK14982 152 DLSKATVAVVGA------------------TGDIGSAVCRWLDAKTGVAELLLVAR 189 (340)
T ss_pred CcCCCEEEEEcc------------------ChHHHHHHHHHHHhhCCCCEEEEEcC
Confidence 688999999987 799999999999865 5 57777765
No 308
>PRK05865 hypothetical protein; Provisional
Probab=78.26 E-value=3.2 Score=44.85 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=29.7
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++||||+| ||..|..++++++++|++|+.+.++
T Consensus 1 MkILVTGA------------------TGfIGs~La~~Ll~~G~~Vv~l~R~ 33 (854)
T PRK05865 1 MRIAVTGA------------------SGVLGRGLTARLLSQGHEVVGIARH 33 (854)
T ss_pred CEEEEECC------------------CCHHHHHHHHHHHHCcCEEEEEECC
Confidence 36899987 7899999999999999999999875
No 309
>PRK06849 hypothetical protein; Provisional
Probab=78.03 E-value=4.1 Score=39.32 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=29.6
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.|+||||+|++. .|..+|++|.+.|++|+++...
T Consensus 3 ~~~~VLI~G~~~~------------------~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGARAP------------------AALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCCcH------------------HHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999998332 5899999999999999999765
No 310
>PLN02970 serine racemase
Probab=77.49 E-value=9.3 Score=36.33 Aligned_cols=102 Identities=12% Similarity=0.025 Sum_probs=54.2
Q ss_pred ccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhccc
Q 022985 43 NFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGL 122 (289)
Q Consensus 43 N~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ 122 (289)
-.|||-+|.++|-++..+|+.++++..+.. .| ...+.++.-+-+.+.+... .....+.+.++.+ +.+.
T Consensus 80 ~aSsGN~g~alA~~a~~~G~~~~ivvp~~~-~~--------~k~~~~~~~GA~Vi~~~~~-~~~~~~~a~~la~--~~g~ 147 (328)
T PLN02970 80 THSSGNHAAALALAAKLRGIPAYIVVPKNA-PA--------CKVDAVIRYGGIITWCEPT-VESREAVAARVQQ--ETGA 147 (328)
T ss_pred EECCcHHHHHHHHHHHHcCCCEEEEECCCC-CH--------HHHHHHHhcCCEEEEeCCC-HHHHHHHHHHHHH--hcCC
Confidence 358999999999999999999999996543 11 1122222223333333322 3333333444432 2455
Q ss_pred ccccccccHHHHHHHHHHHH-HHhhhcCCcchhhhh
Q 022985 123 LLKLPFTTIFEYLQMLQMIA-VSSRSLGPCSMFYLA 157 (289)
Q Consensus 123 ll~~~f~t~~dy~~~l~~i~-~~~~~~~~~d~~i~a 157 (289)
.+.-+|+...-. .....+. +.+++++..|.+|.+
T Consensus 148 ~~~~~~~n~~~~-~g~~t~g~Ei~~ql~~~D~vv~~ 182 (328)
T PLN02970 148 VLIHPYNDGRVI-SGQGTIALEFLEQVPELDVIIVP 182 (328)
T ss_pred EEeCCCCCcchh-hehHHHHHHHHHhccCCCEEEEe
Confidence 666778654322 2222222 223444445655554
No 311
>PRK07201 short chain dehydrogenase; Provisional
Probab=76.94 E-value=3.3 Score=42.35 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=29.8
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHH--HCCCeEEEEecCC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI--KMGYAVIFLYRRG 71 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~--~~Ga~V~~i~g~~ 71 (289)
+||||+| ||..|..+++.++ .+|++|+.+.++.
T Consensus 2 ~ILVTGa------------------tGfIG~~lv~~Ll~~~~g~~V~~l~R~~ 36 (657)
T PRK07201 2 RYFVTGG------------------TGFIGRRLVSRLLDRRREATVHVLVRRQ 36 (657)
T ss_pred eEEEeCC------------------ccHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence 6999998 8999999999999 5999999999853
No 312
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=75.90 E-value=3.9 Score=37.89 Aligned_cols=38 Identities=26% Similarity=0.276 Sum_probs=29.3
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
+|+|++|||--.+- ....+|+++.++||+|+++.++..
T Consensus 1 ~~~~~~~~~gG~~~--------------~~~~la~~l~~~G~ev~v~~~~~~ 38 (350)
T cd03785 1 RILIAGGGTGGHIF--------------PALALAEELRERGAEVLFLGTKRG 38 (350)
T ss_pred CEEEEecCchhhhh--------------HHHHHHHHHHhCCCEEEEEECCCc
Confidence 47888887644333 566899999999999999987654
No 313
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=75.65 E-value=17 Score=33.76 Aligned_cols=39 Identities=15% Similarity=0.095 Sum_probs=31.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.||++||++= .+|+| .+..||+.+.+.||+..|-+-.
T Consensus 3 ~L~GK~~lI~Gv-------------an~rS---IAwGIAk~l~~~GAeL~fTy~~ 41 (259)
T COG0623 3 LLEGKRILIMGV-------------ANNRS---IAWGIAKALAEQGAELAFTYQG 41 (259)
T ss_pred ccCCceEEEEEe-------------ccccc---HHHHHHHHHHHcCCEEEEEecc
Confidence 478999999863 23444 5688999999999999988854
No 314
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=74.75 E-value=8.8 Score=36.28 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=37.0
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|..+|.. .-++.||+|+|-++ |..-|.-+|..|.++||.|+.+|.
T Consensus 143 avi~lL~~~~i~l~Gk~vvVvGr------------------s~~VG~Pla~lL~~~gAtVtv~hs 189 (285)
T PRK14191 143 GVMRLLKHYHIEIKGKDVVIIGA------------------SNIVGKPLAMLMLNAGASVSVCHI 189 (285)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CchhHHHHHHHHHHCCCEEEEEeC
Confidence 45556652 24678999999988 456899999999999999999985
No 315
>PLN02996 fatty acyl-CoA reductase
Probab=73.98 E-value=4.5 Score=40.76 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=30.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe---EEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA---VIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~---V~~i~g~~ 71 (289)
.+||.||||+| ||-.|..+++.+++.+.+ |.++.|+.
T Consensus 9 ~~~k~VlvTGa------------------TGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 9 LENKTILVTGA------------------TGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred hCCCeEEEeCC------------------CcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 57889999987 999999999999988754 57777754
No 316
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=73.77 E-value=6.3 Score=36.82 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=29.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe-EEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~-V~~i~g~ 70 (289)
.+.+|++|||++ |..|.++|.+++..|+. |+++.|.
T Consensus 123 ~~~~k~vlI~GA-------------------GGagrAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 123 DVKGKKLTVIGA-------------------GGAATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred CcCCCEEEEECC-------------------cHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 367889999976 45999999999999997 8887764
No 317
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=73.43 E-value=7.2 Score=36.55 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=32.2
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.|++|+|.+. |.+|.++|+.+..+|++|+++.+.
T Consensus 147 ~~l~gk~v~IiG~-------------------G~iG~avA~~L~~~G~~V~v~~R~ 183 (287)
T TIGR02853 147 FTIHGSNVMVLGF-------------------GRTGMTIARTFSALGARVFVGARS 183 (287)
T ss_pred CCCCCCEEEEEcC-------------------hHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578899999876 889999999999999999988763
No 318
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase. Class I lysyl tRNA synthetase (LysRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. The class I LysRS is found only in archaea and some bacteria and has evolved separately from class II LysRS, as the two do not share structural or sequence similarity.
Probab=72.49 E-value=13 Score=36.22 Aligned_cols=52 Identities=19% Similarity=0.240 Sum_probs=45.9
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
+.+++||+|-| ++..=.|.|+-+-.++-.+|+++..+|++|.|+++....-|
T Consensus 18 ~~~~~v~tgi~-----psG~~HIG~~~e~i~~D~i~R~lr~~G~~v~~v~~~Dd~d~ 69 (353)
T cd00674 18 KEKYVVASGIS-----PSGHIHIGNFREVITADLVARALRDLGFEVRLIYSWDDYDR 69 (353)
T ss_pred CCeEEEecCCC-----CCCCcccCccHHHHHHHHHHHHHHHcCCCEEEEEEEcCCCc
Confidence 35799999986 34788999999999999999999999999999999887644
No 319
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=72.21 E-value=5.4 Score=30.15 Aligned_cols=24 Identities=29% Similarity=0.450 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHHHCC---CeEEEEec
Q 022985 46 SGHRGAASTEHLIKMG---YAVIFLYR 69 (289)
Q Consensus 46 SG~~G~~iAe~~~~~G---a~V~~i~g 69 (289)
+|.||.+|++.+++.| ++|++++.
T Consensus 7 ~G~mg~al~~~l~~~g~~~~~v~~~~~ 33 (96)
T PF03807_consen 7 AGNMGSALARGLLASGIKPHEVIIVSS 33 (96)
T ss_dssp TSHHHHHHHHHHHHTTS-GGEEEEEEE
T ss_pred CCHHHHHHHHHHHHCCCCceeEEeecc
Confidence 6999999999999999 99998843
No 320
>PLN02503 fatty acyl-CoA reductase 2
Probab=72.09 E-value=5 Score=41.75 Aligned_cols=38 Identities=11% Similarity=0.129 Sum_probs=31.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCC---eEEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY---AVIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga---~V~~i~g~~ 71 (289)
-.+||+||||+| ||-+|..+++.+++.+. .|.++.++.
T Consensus 116 f~~~k~VlVTGa------------------TGFLGk~LlekLLr~~~~v~kIy~LvR~k 156 (605)
T PLN02503 116 FLRGKNFLITGA------------------TGFLAKVLIEKILRTNPDVGKIYLLIKAK 156 (605)
T ss_pred hhcCCEEEEcCC------------------chHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 357999999998 99999999999999876 467777753
No 321
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=71.71 E-value=4.1 Score=34.39 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|.+|.++|..+..+|++|++..++
T Consensus 7 aG~~G~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 7 AGNWGTALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp SSHHHHHHHHHHHHCTEEEEEETSC
T ss_pred cCHHHHHHHHHHHHcCCEEEEEecc
Confidence 6899999999999999999999986
No 322
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=71.45 E-value=5.4 Score=33.74 Aligned_cols=24 Identities=38% Similarity=0.553 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|.||..+|+.++++|++|+...+
T Consensus 9 lG~mG~~~a~~L~~~g~~v~~~d~ 32 (163)
T PF03446_consen 9 LGNMGSAMARNLAKAGYEVTVYDR 32 (163)
T ss_dssp -SHHHHHHHHHHHHTTTEEEEEES
T ss_pred hHHHHHHHHHHHHhcCCeEEeecc
Confidence 599999999999999999987664
No 323
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=71.27 E-value=17 Score=30.63 Aligned_cols=49 Identities=16% Similarity=0.030 Sum_probs=38.1
Q ss_pred HHHHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 4 FANCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 4 ~~~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.+..+++. ..++.||+|+|=+. |+.-|..+|..+.++|+.|+.+|..
T Consensus 12 ~~a~~~ll~~~~~~~~gk~v~VvGr------------------s~~vG~pla~lL~~~gatV~~~~~~ 61 (140)
T cd05212 12 AKAVKELLNKEGVRLDGKKVLVVGR------------------SGIVGAPLQCLLQRDGATVYSCDWK 61 (140)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECC------------------CchHHHHHHHHHHHCCCEEEEeCCC
Confidence 3455566653 24589999999665 6678999999999999999999963
No 324
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=70.84 E-value=8.7 Score=38.11 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=31.2
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.+++|+|.+| |..|.++|+.+.++|++|+++.+.
T Consensus 12 ~~~~~~~v~viG~-------------------G~~G~~~A~~L~~~G~~V~~~d~~ 48 (480)
T PRK01438 12 SDWQGLRVVVAGL-------------------GVSGFAAADALLELGARVTVVDDG 48 (480)
T ss_pred cCcCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467888988887 778889999999999999998754
No 325
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=70.52 E-value=8.1 Score=36.92 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
...+++|+||+| -|-.|..|++-+.-.|++|+.+--
T Consensus 24 p~~~lrI~itGg------------------aGFIgSHLvdkLm~egh~VIa~Dn 59 (350)
T KOG1429|consen 24 PSQNLRILITGG------------------AGFIGSHLVDKLMTEGHEVIALDN 59 (350)
T ss_pred CCCCcEEEEecC------------------cchHHHHHHHHHHhcCCeEEEEec
Confidence 456799999999 488999999999999999998864
No 326
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=70.05 E-value=5.4 Score=37.20 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=27.2
Q ss_pred CeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 37 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 37 ~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++-|.--=.|.||..||..++..|++|+++-..
T Consensus 4 ~~~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 4 AIQRVGVVGAGQMGAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred CccEEEEEcccHHHHHHHHHHHhCCCEEEEEECC
Confidence 3444444456999999999999999999999864
No 327
>PRK07334 threonine dehydratase; Provisional
Probab=69.96 E-value=27 Score=34.11 Aligned_cols=102 Identities=13% Similarity=0.097 Sum_probs=53.9
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccc
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLL 123 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~l 123 (289)
.|||-+|.++|-++...|+.++++..... |. .-.+.++.-+-+ |.+.+....+..+.+.++.+ ..+..
T Consensus 77 aSsGN~g~alA~~a~~~G~~~~iv~p~~~--~~-------~k~~~~~~~GA~-v~~~~~~~~~~~~~a~~l~~--~~~~~ 144 (403)
T PRK07334 77 MSAGNHAQGVAYHAQRLGIPATIVMPRFT--PT-------VKVERTRGFGAE-VVLHGETLDEARAHARELAE--EEGLT 144 (403)
T ss_pred ECCcHHHHHHHHHHHHcCCCEEEEECCCC--CH-------HHHHHHHHcCCE-EEEECcCHHHHHHHHHHHHH--hcCCE
Confidence 58999999999999999999999995443 21 112222222222 33332222333333333322 24566
Q ss_pred cccccccHHHHHHHHHHHHHHhhhcCCcchhhhh
Q 022985 124 LKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLA 157 (289)
Q Consensus 124 l~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~a 157 (289)
+..+|+...-....-....+.+++.+..|.+|.+
T Consensus 145 ~~~~~~~~~~~~g~~t~~~Ei~~q~~~~d~vv~~ 178 (403)
T PRK07334 145 FVHPYDDPAVIAGQGTVALEMLEDAPDLDTLVVP 178 (403)
T ss_pred ecCCCCCHHHHHhHHHHHHHHHhcCCCCCEEEEe
Confidence 6677875443322222222233445555666654
No 328
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=69.75 E-value=35 Score=29.97 Aligned_cols=20 Identities=30% Similarity=0.233 Sum_probs=14.6
Q ss_pred HHHHH-HHHHHHCCCeEEEEe
Q 022985 49 RGAAS-TEHLIKMGYAVIFLY 68 (289)
Q Consensus 49 ~G~~i-Ae~~~~~Ga~V~~i~ 68 (289)
.|..+ +..|...||+|+++-
T Consensus 97 lG~~~v~~~l~~~G~~vi~lG 117 (201)
T cd02070 97 IGKNLVATMLEANGFEVIDLG 117 (201)
T ss_pred HHHHHHHHHHHHCCCEEEECC
Confidence 55655 556667999998776
No 329
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=68.45 E-value=11 Score=34.91 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=30.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCC-CeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~G-a~V~~i~g~ 70 (289)
.+.+|+|||++. |.+|.++|.++..+| .+|+++.|.
T Consensus 120 ~~~~k~vlVlGa-------------------Gg~a~ai~~aL~~~g~~~V~v~~R~ 156 (278)
T PRK00258 120 DLKGKRILILGA-------------------GGAARAVILPLLDLGVAEITIVNRT 156 (278)
T ss_pred CCCCCEEEEEcC-------------------cHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 477889998843 789999999999999 788888764
No 330
>PRK06815 hypothetical protein; Provisional
Probab=67.78 E-value=22 Score=33.56 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=27.0
Q ss_pred eEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 40 YIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 40 ~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.++ .|||-+|.++|-++...|..++++..+.
T Consensus 71 vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~ 101 (317)
T PRK06815 71 VIT-ASSGNHGQGVALAAKLAGIPVTVYAPEQ 101 (317)
T ss_pred EEE-ECCChHHHHHHHHHHHhCCCEEEEECCC
Confidence 344 5999999999999999999999999654
No 331
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=67.70 E-value=16 Score=34.55 Aligned_cols=28 Identities=32% Similarity=0.407 Sum_probs=23.5
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA 63 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~ 63 (289)
.+|.+|||+- ||| .|.+||.-+++---+
T Consensus 2 ~RKvalITGa-----------------nSg-lGl~i~~RLl~~~De 29 (341)
T KOG1478|consen 2 MRKVALITGA-----------------NSG-LGLAICKRLLAEDDE 29 (341)
T ss_pred CceEEEEecC-----------------CCc-ccHHHHHHHHhccCC
Confidence 4678888876 899 999999999987665
No 332
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=67.02 E-value=23 Score=32.66 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=25.1
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|||-+|.++|-++...|..++++....
T Consensus 71 ~ssGN~g~alA~~a~~~G~~~~ivvp~~ 98 (304)
T cd01562 71 ASAGNHAQGVAYAAKLLGIPATIVMPET 98 (304)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4789999999999999999999999544
No 333
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=66.82 E-value=6.9 Score=34.76 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|.||.++|..+.+.|++|+++.+.
T Consensus 9 ~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 9 TGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 7899999999999999999988654
No 334
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=66.78 E-value=9.3 Score=35.77 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=27.8
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
++|+|++||+-..+- ....+|+++.++||+|+++.++.+
T Consensus 2 ~~i~i~~~g~gG~~~--------------~~~~la~~L~~~g~ev~vv~~~~~ 40 (357)
T PRK00726 2 KKILLAGGGTGGHVF--------------PALALAEELKKRGWEVLYLGTARG 40 (357)
T ss_pred cEEEEEcCcchHhhh--------------HHHHHHHHHHhCCCEEEEEECCCc
Confidence 467788765432221 334799999999999999998664
No 335
>PRK07048 serine/threonine dehydratase; Validated
Probab=66.71 E-value=20 Score=33.81 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=25.3
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|||-+|.++|-++...|+.++++....
T Consensus 78 aSsGN~g~alA~~a~~~G~~~~vvvp~~ 105 (321)
T PRK07048 78 FSSGNHAQAIALSARLLGIPATIVMPQD 105 (321)
T ss_pred eCCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5789999999999999999999999654
No 336
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=66.69 E-value=6.8 Score=36.83 Aligned_cols=29 Identities=31% Similarity=0.508 Sum_probs=26.0
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
=||+-|..+||.++.+||+|.=|-+.+|-
T Consensus 36 ItGQDGSYLaEfLL~KgYeVHGiiRRsSs 64 (376)
T KOG1372|consen 36 ITGQDGSYLAEFLLSKGYEVHGIIRRSSS 64 (376)
T ss_pred ccCCCchHHHHHHHhCCceeeEEEeeccc
Confidence 48999999999999999999998887763
No 337
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=66.61 E-value=10 Score=38.63 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=30.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++.+|+|||+++ |-.|.++|.++.++|++|+++.+
T Consensus 376 ~~~~k~vlIlGa-------------------GGagrAia~~L~~~G~~V~i~nR 410 (529)
T PLN02520 376 PLAGKLFVVIGA-------------------GGAGKALAYGAKEKGARVVIANR 410 (529)
T ss_pred CCCCCEEEEECC-------------------cHHHHHHHHHHHHCCCEEEEEcC
Confidence 467899999987 45999999999999998887765
No 338
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=66.34 E-value=15 Score=31.67 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=33.3
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|..+.++|+.|+..|..
T Consensus 22 aii~lL~~~~~~l~Gk~v~VvGr------------------s~~VG~Pla~lL~~~~atVt~~h~~ 69 (160)
T PF02882_consen 22 AIIELLEYYGIDLEGKKVVVVGR------------------SNIVGKPLAMLLLNKGATVTICHSK 69 (160)
T ss_dssp HHHHHHHHTT-STTT-EEEEE-T------------------TTTTHHHHHHHHHHTT-EEEEE-TT
T ss_pred HHHHHHHhcCCCCCCCEEEEECC------------------cCCCChHHHHHHHhCCCeEEeccCC
Confidence 34455542 23589999999886 6668999999999999999999964
No 339
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=65.81 E-value=12 Score=34.11 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=32.0
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..++|++|||-+| |.-|..=++.|++.|++|++|+-.
T Consensus 21 l~~~~~~VLVVGG-------------------G~VA~RK~~~Ll~~gA~VtVVap~ 57 (223)
T PRK05562 21 LLSNKIKVLIIGG-------------------GKAAFIKGKTFLKKGCYVYILSKK 57 (223)
T ss_pred EECCCCEEEEECC-------------------CHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3467999999999 778888899999999999999944
No 340
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=65.80 E-value=12 Score=33.74 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=31.7
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
++.||+|||.+| |.-|..=|+-|++.|+.|++++-.
T Consensus 9 ~l~~k~VlvvGg-------------------G~va~rKa~~ll~~ga~v~Vvs~~ 44 (210)
T COG1648 9 DLEGKKVLVVGG-------------------GSVALRKARLLLKAGADVTVVSPE 44 (210)
T ss_pred EcCCCEEEEECC-------------------CHHHHHHHHHHHhcCCEEEEEcCC
Confidence 578999999999 667778899999999999999954
No 341
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=65.68 E-value=16 Score=29.96 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=28.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCC-CeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG-YAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~G-a~V~~i~g 69 (289)
+.++++|+|+++ |.+|.++|+.+.+.| +.|+++.+
T Consensus 16 ~~~~~~i~iiG~-------------------G~~g~~~a~~l~~~g~~~v~v~~r 51 (155)
T cd01065 16 ELKGKKVLILGA-------------------GGAARAVAYALAELGAAKIVIVNR 51 (155)
T ss_pred CCCCCEEEEECC-------------------cHHHHHHHHHHHHCCCCEEEEEcC
Confidence 366788888855 779999999999996 67777754
No 342
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete. This model represents the lysyl-tRNA synthetases that are class I amino-acyl tRNA synthetases. It includes archaeal and spirochete examples of the enzyme. All other known examples are class IIc amino-acyl tRNA synthetases and seem to form a separate orthologous set.
Probab=65.45 E-value=17 Score=37.11 Aligned_cols=52 Identities=25% Similarity=0.255 Sum_probs=45.9
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPY 76 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~ 76 (289)
..++||+|=| ++..-.|.|+-.=-++-.+++++..+|.+|.+|++.....|+
T Consensus 18 ~~~~~~tg~~-----psG~~HiG~~~e~~~~d~v~r~~r~~g~~~~~i~~~Dd~D~l 69 (515)
T TIGR00467 18 NLYTVASGIT-----PSGHIHIGNFREVITADAIARALRDSGSEARFIYIADNYDPL 69 (515)
T ss_pred CeEEEecCCC-----CCCCccccchhhhhHHHHHHHHHHHcCCCEEEEEEEcCCccc
Confidence 4799999965 668999999999899999999999999999999998877443
No 343
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=65.42 E-value=15 Score=30.22 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=29.2
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe-EEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~-V~~i~g 69 (289)
++.+++|||-+. |.+|.+++.++..+|+. |+++.|
T Consensus 9 ~l~~~~vlviGa-------------------Gg~ar~v~~~L~~~g~~~i~i~nR 44 (135)
T PF01488_consen 9 DLKGKRVLVIGA-------------------GGAARAVAAALAALGAKEITIVNR 44 (135)
T ss_dssp TGTTSEEEEESS-------------------SHHHHHHHHHHHHTTSSEEEEEES
T ss_pred CcCCCEEEEECC-------------------HHHHHHHHHHHHHcCCCEEEEEEC
Confidence 578888888764 77999999999999998 666665
No 344
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=64.69 E-value=8.1 Score=36.97 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=26.8
Q ss_pred CeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 37 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 37 ~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++|-|.=.=+|.||..+|..|+..|++|+++-.
T Consensus 6 ~i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~ 38 (321)
T PRK07066 6 DIKTFAAIGSGVIGSGWVARALAHGLDVVAWDP 38 (321)
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 344444445799999999999999999998874
No 345
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=64.43 E-value=11 Score=37.55 Aligned_cols=41 Identities=15% Similarity=0.128 Sum_probs=34.8
Q ss_pred CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 14 DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 14 ~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
+.+++||+|+|-++ |-.|..||-+++..|++|+++.|....
T Consensus 170 ~~~~~GKrV~VIG~-------------------GaSA~di~~~l~~~ga~vt~~qRs~~~ 210 (443)
T COG2072 170 PEDLRGKRVLVIGA-------------------GASAVDIAPELAEVGASVTLSQRSPPH 210 (443)
T ss_pred ccccCCCeEEEECC-------------------CccHHHHHHHHHhcCCeeEEEecCCCc
Confidence 45789999999876 556789999999999999999997653
No 346
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.15 E-value=17 Score=34.32 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=37.0
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|.+. |..-|.-+|..+..+||.||..|..
T Consensus 145 av~~ll~~~~i~l~Gk~vvViGr------------------s~iVG~Pla~lL~~~~atVtv~hs~ 192 (285)
T PRK10792 145 GIMTLLERYGIDTYGLNAVVVGA------------------SNIVGRPMSLELLLAGCTVTVCHRF 192 (285)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CcccHHHHHHHHHHCCCeEEEEECC
Confidence 34455542 23578999999876 5668999999999999999999964
No 347
>PRK06382 threonine dehydratase; Provisional
Probab=63.42 E-value=38 Score=33.21 Aligned_cols=101 Identities=9% Similarity=-0.039 Sum_probs=54.0
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccc
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLL 123 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~l 123 (289)
.|||-.|.++|-++...|..++++..... |. .-.+.++.-+-+.+.+.. ...+......++.+ ..+..
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~--~~-------~k~~~~~~~GA~Vv~~~~-~~~~a~~~a~~la~--~~~~~ 146 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYT--IP-------QKVNAVEAYGAHVILTGR-DYDEAHRYADKIAM--DENRT 146 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCC--HH-------HHHHHHHHcCCEEEEECC-CHHHHHHHHHHHHH--hcCCE
Confidence 58899999999999999999999995543 21 112222222223233322 22333333333322 34667
Q ss_pred cccccccHHHHHHHHHHH-HHHhhhcCCcchhhhh
Q 022985 124 LKLPFTTIFEYLQMLQMI-AVSSRSLGPCSMFYLA 157 (289)
Q Consensus 124 l~~~f~t~~dy~~~l~~i-~~~~~~~~~~d~~i~a 157 (289)
+..+|+...-.. ....+ .+.+++.+..|.+|.+
T Consensus 147 ~v~~~~~~~~i~-g~~t~~~Ei~eq~~~~d~vvvp 180 (406)
T PRK06382 147 FIEAFNDRWVIS-GQGTIGLEIMEDLPDLDQIIVP 180 (406)
T ss_pred ecCccCChHHHH-HHHHHHHHHHHhcCCCCEEEEe
Confidence 778887654222 22222 2223445556665544
No 348
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=63.31 E-value=19 Score=35.65 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=41.8
Q ss_pred CcEEEEeCCCcccccC---CCCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 19 RRVACVTSGGTTVPLE---QRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID---~~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
-++++|-.|.+.-++. ...++++++. =.|-.|..+|..+.+.|.+|+++.+...+.|
T Consensus 137 ~d~lVIATGs~p~~ipg~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~ig~E~A~~l~~~G~~Vtlie~~~~il~ 211 (466)
T PRK06115 137 AKDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPEVPKHLVVIGAGVIGLELGSVWRRLGAQVTVVEYLDRICP 211 (466)
T ss_pred eCEEEEeCCCCCCCCCCCCCCCCeEECHHHHhCCccCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCCCCC
Confidence 3578998887654433 1156777642 2788999999999999999999987655444
No 349
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=63.13 E-value=36 Score=33.89 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=28.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++++++|||-+= |.||..+|.+++.+|...+.|+.
T Consensus 175 ~L~~~~vlvIGA-------------------Gem~~lva~~L~~~g~~~i~IaN 209 (414)
T COG0373 175 SLKDKKVLVIGA-------------------GEMGELVAKHLAEKGVKKITIAN 209 (414)
T ss_pred ccccCeEEEEcc-------------------cHHHHHHHHHHHhCCCCEEEEEc
Confidence 378888888764 78999999999999976666664
No 350
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=63.07 E-value=8.1 Score=36.19 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..++++|++|+++-+.
T Consensus 10 ~G~mG~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 10 AGLIGRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred ccHHHHHHHHHHHHCCCeeEEEeCC
Confidence 6999999999999999999999764
No 351
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.01 E-value=15 Score=34.43 Aligned_cols=37 Identities=19% Similarity=0.102 Sum_probs=32.2
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..+.||+|+|-+ .||.-|..+|..+..+|+.|+++|+
T Consensus 155 i~l~Gk~vvViG------------------~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 155 IELAGKHAVVVG------------------RSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCCCCCEEEEEC------------------CcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 357899998865 4777999999999999999999996
No 352
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=62.50 E-value=8.7 Score=34.80 Aligned_cols=166 Identities=19% Similarity=0.121 Sum_probs=87.8
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhccccc
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLL 124 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~ll 124 (289)
=+|.+|.++|..|.+.||+|++-.+... ... . ..-..+. ..+.. .+...|++. ..=-+|
T Consensus 8 GtGniG~alA~~~a~ag~eV~igs~r~~---~~~--~--a~a~~l~----~~i~~-----~~~~dA~~~-----aDVVvL 66 (211)
T COG2085 8 GTGNIGSALALRLAKAGHEVIIGSSRGP---KAL--A--AAAAALG----PLITG-----GSNEDAAAL-----ADVVVL 66 (211)
T ss_pred ccChHHHHHHHHHHhCCCeEEEecCCCh---hHH--H--HHHHhhc----ccccc-----CChHHHHhc-----CCEEEE
Confidence 4899999999999999999999866432 100 0 0000000 00111 111222221 123478
Q ss_pred ccccccHHHHHHHHHHHHHHhhhcCCcchhhhhhhcCCCCCCcccccCCCcCCCC--CCeeEEEEcccchhHHhhcc---
Q 022985 125 KLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGS--GPLDMQLLQVPKMLSVLRKE--- 199 (289)
Q Consensus 125 ~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~aAAVsDf~v~~~~~~~~KI~s~~--~~l~l~L~~~Pkil~~i~~~--- 199 (289)
.+||..+.+-...+... ++ |-++--+.+.+... ..........+.. -.+.-++.|.+|+++-+...
T Consensus 67 AVP~~a~~~v~~~l~~~------~~--~KIvID~tnp~~~~-~~~~~~~~~~~~~saae~va~~lp~akVVkAFn~i~a~ 137 (211)
T COG2085 67 AVPFEAIPDVLAELRDA------LG--GKIVIDATNPIEVN-GEPGDLYLVPSEGSAAEIVAKLLPGAKVVKAFNTIPAA 137 (211)
T ss_pred eccHHHHHhHHHHHHHH------hC--CeEEEecCCCcccc-CCccccccCCCCCcHHHHHHHHCCCcchhhhhcccCHH
Confidence 88998888877666532 22 44444444442110 0111122222221 12455567777777655432
Q ss_pred -----cCCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCCC
Q 022985 200 -----WAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS 241 (289)
Q Consensus 200 -----~~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~~ 241 (289)
..+. .-..--+-.|+++-.+.+.+..++-|++.|-+=.|+.
T Consensus 138 ~l~~~~~~~-~~~~v~vagDD~~Ak~~v~~L~~~iG~~~ld~G~L~~ 183 (211)
T COG2085 138 VLADLAKPG-GRRDVLVAGDDAEAKAVVAELAEDIGFRPLDAGPLEN 183 (211)
T ss_pred HhccCCCcC-CceeEEEecCcHHHHHHHHHHHHhcCcceeecccccc
Confidence 1121 1222223345566778888888888999998877765
No 353
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=62.28 E-value=20 Score=33.99 Aligned_cols=47 Identities=11% Similarity=0.019 Sum_probs=36.9
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|.+. |..-|.-+|..+.++||.||..|..
T Consensus 150 av~~ll~~~~i~l~Gk~vvViGr------------------s~iVGkPla~lL~~~~atVtv~hs~ 197 (287)
T PRK14176 150 GVIRALEEYGVDIEGKNAVIVGH------------------SNVVGKPMAAMLLNRNATVSVCHVF 197 (287)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CcccHHHHHHHHHHCCCEEEEEecc
Confidence 34555552 23579999999876 5668999999999999999999953
No 354
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=62.25 E-value=13 Score=34.53 Aligned_cols=69 Identities=17% Similarity=0.134 Sum_probs=42.5
Q ss_pred CeeEEEEcccchhHHhhcccCCCeeEEEEeeccCchHHHHHHHHHHHhcCCcEEEEecCCC-------------CCcEEE
Q 022985 181 PLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLS-------------RKEQVV 247 (289)
Q Consensus 181 ~l~l~L~~~Pkil~~i~~~~~p~~~~VgFklEt~~e~li~~A~~kL~~k~~D~VvaN~l~~-------------~~~~v~ 247 (289)
.+....-|+|+.+....+..-|..-+|... -.-.. +--++.++++++|++|.=+-.. ..-.++
T Consensus 152 ~~~~RvLP~~~~l~~~~~~G~~~~~iia~~--gPfs~--e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vi 227 (256)
T TIGR00715 152 VVFVRVLPYPQALAQALKLGFPSDRIIAMR--GPFSE--ELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVI 227 (256)
T ss_pred eEEEEECCCchhhHHHHHcCCChhcEEEEe--CCCCH--HHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEE
Confidence 466667789988887765433444455322 11111 2226778999999999876643 145778
Q ss_pred EEeCCC
Q 022985 248 VVTNNG 253 (289)
Q Consensus 248 li~~~~ 253 (289)
+|..-.
T Consensus 228 vI~RP~ 233 (256)
T TIGR00715 228 RIARPQ 233 (256)
T ss_pred EEeCCC
Confidence 887654
No 355
>PRK06444 prephenate dehydrogenase; Provisional
Probab=62.19 E-value=7.2 Score=34.73 Aligned_cols=21 Identities=24% Similarity=0.253 Sum_probs=19.6
Q ss_pred chhHHHHHHHHHHHHCCCeEE
Q 022985 45 SSGHRGAASTEHLIKMGYAVI 65 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~ 65 (289)
.+|+||..+|..|.+.|+.|+
T Consensus 8 ~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 8 KNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred cCCcHHHHHHHHHHhCCCEEE
Confidence 479999999999999999997
No 356
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=62.14 E-value=12 Score=36.00 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=30.0
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
...+|-|+||+. =|| .|..+|..+.++|+.|.-=+
T Consensus 26 ~~~~k~VlITGC-----------------DSG-fG~~LA~~L~~~Gf~V~Agc 60 (322)
T KOG1610|consen 26 SLSDKAVLITGC-----------------DSG-FGRLLAKKLDKKGFRVFAGC 60 (322)
T ss_pred ccCCcEEEEecC-----------------CcH-HHHHHHHHHHhcCCEEEEEe
Confidence 467889999999 488 99999999999999886544
No 357
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=61.98 E-value=14 Score=36.30 Aligned_cols=35 Identities=20% Similarity=0.058 Sum_probs=29.0
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+.+|+|+|+++ |..|.++|+.+.++|+.|+..-..
T Consensus 3 ~~~~~~~v~G~-------------------g~~G~~~a~~l~~~g~~v~~~d~~ 37 (445)
T PRK04308 3 FQNKKILVAGL-------------------GGTGISMIAYLRKNGAEVAAYDAE 37 (445)
T ss_pred CCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45788999988 458888899999999999987654
No 358
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed
Probab=61.82 E-value=20 Score=36.48 Aligned_cols=50 Identities=16% Similarity=0.182 Sum_probs=44.5
Q ss_pred EEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 21 VACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 21 ~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.++|++|-| +|..=.|.|+-+=-++..+++++..+|.+|.||++....-|
T Consensus 24 ~~~~~~g~~-----psG~~HiG~~~e~~~~d~v~r~lr~~G~~v~~i~~~Dd~d~ 73 (510)
T PRK00750 24 PVVVETGIG-----PSGLPHIGNFREVARTDMVRRALRDLGIKTRLIFFSDDMDG 73 (510)
T ss_pred cEEEEeCCC-----CCCCcccccccchhhHHHHHHHHHHcCCcEEEEEEEecCCc
Confidence 499999985 56899999999999999999999999999999999876644
No 359
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.81 E-value=19 Score=34.04 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=36.7
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|..+|.. .-++.||+|+|-++ |..-|.-+|..|.++||.||+.|.
T Consensus 143 avi~lL~~~~i~l~Gk~vvViGr------------------S~~VG~Pla~lL~~~~AtVti~hs 189 (281)
T PRK14183 143 GVMELLEEYEIDVKGKDVCVVGA------------------SNIVGKPMAALLLNANATVDICHI 189 (281)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCC
Confidence 45556653 24689999999987 456899999999999999998885
No 360
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=61.78 E-value=7.9 Score=34.92 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|+.|..+|+.|.++|++|++|-....
T Consensus 9 G~vG~~va~~L~~~g~~Vv~Id~d~~ 34 (225)
T COG0569 9 GRVGRSVARELSEEGHNVVLIDRDEE 34 (225)
T ss_pred cHHHHHHHHHHHhCCCceEEEEcCHH
Confidence 89999999999999999999997654
No 361
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=61.55 E-value=30 Score=29.61 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=29.9
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
...+++|+|=+|+. -.|--|..+|+++.++|+.|+++.
T Consensus 22 ~~~~~~v~il~G~G---------------nNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 22 SPKGPRVLILCGPG---------------NNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp CCTT-EEEEEE-SS---------------HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCeEEEEECCC---------------CChHHHHHHHHHHHHCCCeEEEEE
Confidence 35677888888843 578899999999999999999954
No 362
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=61.33 E-value=12 Score=36.32 Aligned_cols=25 Identities=28% Similarity=0.359 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+.++|+.|+++-+.
T Consensus 107 ~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 107 KGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred CChhhHHHHHHHHHCCCeEEEeCCC
Confidence 6999999999999999999988763
No 363
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=61.30 E-value=16 Score=35.28 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|-.|..+|..+.++|.+|+++.+...
T Consensus 153 G~ig~E~A~~l~~~g~~Vtlv~~~~~ 178 (396)
T PRK09754 153 GTIGLELAASATQRRCKVTVIELAAT 178 (396)
T ss_pred CHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 56899999999999999999987544
No 364
>PRK12831 putative oxidoreductase; Provisional
Probab=61.22 E-value=15 Score=36.63 Aligned_cols=36 Identities=22% Similarity=0.465 Sum_probs=30.9
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
..||+|+|-+| |-.|..+|..+.+.|++|+++++..
T Consensus 279 ~~gk~VvVIGg-------------------G~va~d~A~~l~r~Ga~Vtlv~r~~ 314 (464)
T PRK12831 279 KVGKKVAVVGG-------------------GNVAMDAARTALRLGAEVHIVYRRS 314 (464)
T ss_pred cCCCeEEEECC-------------------cHHHHHHHHHHHHcCCEEEEEeecC
Confidence 46789999888 4488999999999999999999754
No 365
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=60.89 E-value=6.2 Score=36.55 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=30.2
Q ss_pred CeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 37 CVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 37 ~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
+++-++=.-.|.||.-||+.++..|+.|+++-.+..
T Consensus 10 ~~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~~ 45 (298)
T KOG2304|consen 10 EIKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANED 45 (298)
T ss_pred cccceEEEcccccchhHHHHHHhcCCceEEecCCHH
Confidence 455566667899999999999999999999987644
No 366
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=60.42 E-value=9.8 Score=35.82 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||.++|..+.+.|++|+++.++
T Consensus 12 ~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 12 AGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999999999874
No 367
>PRK07846 mycothione reductase; Reviewed
Probab=60.21 E-value=23 Score=35.11 Aligned_cols=58 Identities=21% Similarity=0.227 Sum_probs=40.3
Q ss_pred CCcEEEEeCCCcccccC--C-CCeeeEcccc---------------hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 18 TRRVACVTSGGTTVPLE--Q-RCVRYIDNFS---------------SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID--~-~~VR~IsN~S---------------SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.-++++|-.|....+.+ . ..+++++... .|-.|..+|+.+.++|.+|+++.+.....|
T Consensus 128 ~~d~lViATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~vvIIGgG~iG~E~A~~l~~~G~~Vtli~~~~~ll~ 203 (451)
T PRK07846 128 TADQVVIAAGSRPVIPPVIADSGVRYHTSDTIMRLPELPESLVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLR 203 (451)
T ss_pred EeCEEEEcCCCCCCCCCCCCcCCccEEchHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 45678888886643221 0 1345555431 788999999999999999999998655443
No 368
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=60.02 E-value=11 Score=35.27 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+|.||.++|..+...|++|+++.++.
T Consensus 12 ~G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 12 AGAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 69999999999999999999887754
No 369
>PRK06370 mercuric reductase; Validated
Probab=59.25 E-value=19 Score=35.45 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.|..|..+|..+.++|.+|+++.+...+.|
T Consensus 179 gG~~g~E~A~~l~~~G~~Vtli~~~~~~l~ 208 (463)
T PRK06370 179 GGYIGLEFAQMFRRFGSEVTVIERGPRLLP 208 (463)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEEcCCCCCc
Confidence 688999999999999999999997655443
No 370
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=58.98 E-value=32 Score=32.48 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=28.1
Q ss_pred eeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 38 VRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 38 VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.+.|--.|||-+|.++|-++...|+.++++....
T Consensus 51 ~~~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~ 84 (316)
T cd06448 51 CVHVVCSSGGNAGLAAAYAARKLGVPCTIVVPES 84 (316)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3344445889999999999999999999999654
No 371
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=58.79 E-value=11 Score=34.82 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..++.+|++|+++.++
T Consensus 12 aG~mG~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 12 AGQMGNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999999998754
No 372
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=58.77 E-value=19 Score=33.02 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=27.9
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..+|+|+|+++ |.+|.++|..+...|++|+++.+
T Consensus 115 ~~~k~vliiGa-------------------Gg~g~aia~~L~~~g~~v~v~~R 148 (270)
T TIGR00507 115 RPNQRVLIIGA-------------------GGAARAVALPLLKADCNVIIANR 148 (270)
T ss_pred ccCCEEEEEcC-------------------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 45677777765 66999999999999998888765
No 373
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=58.59 E-value=13 Score=30.37 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|-+|..+|-.|.+.|++|+++.++.
T Consensus 6 ~GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 6 AGAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred cCHHHHHHHHHHHHCCCceEEEEccc
Confidence 48899999999999999999999854
No 374
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=58.50 E-value=9.7 Score=35.20 Aligned_cols=25 Identities=12% Similarity=0.201 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..++++|++|+++-.+
T Consensus 9 ~G~mG~~iA~~la~~G~~V~~~d~~ 33 (288)
T PRK09260 9 AGVMGRGIAYVFAVSGFQTTLVDIK 33 (288)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEeCC
Confidence 5999999999999999999988653
No 375
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=58.44 E-value=14 Score=35.76 Aligned_cols=35 Identities=34% Similarity=0.381 Sum_probs=30.2
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe-EEEEe
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLY 68 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~-V~~i~ 68 (289)
|+|++|+|||--.+= -+.++|++|.++|++ |.++-
T Consensus 1 ~~ivl~~gGTGGHv~--------------pAlAl~~~l~~~g~~~v~~~~ 36 (357)
T COG0707 1 KKIVLTAGGTGGHVF--------------PALALAEELAKRGWEQVIVLG 36 (357)
T ss_pred CeEEEEeCCCccchh--------------HHHHHHHHHHhhCccEEEEec
Confidence 579999999988888 789999999999995 66663
No 376
>PRK07476 eutB threonine dehydratase; Provisional
Probab=58.11 E-value=25 Score=33.24 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=24.6
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|||-.|.++|-++...|..++++....
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~ 100 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRL 100 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCC
Confidence 899999999999999999999999543
No 377
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.97 E-value=25 Score=33.24 Aligned_cols=47 Identities=15% Similarity=0.117 Sum_probs=37.2
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|..+.++||.||..|..
T Consensus 144 aii~lL~~y~i~l~Gk~vvViGr------------------S~~VGkPla~lL~~~~ATVt~chs~ 191 (282)
T PRK14180 144 GIMTMLREYGIKTEGAYAVVVGA------------------SNVVGKPVSQLLLNAKATVTTCHRF 191 (282)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEEcCC
Confidence 44555652 23588999999876 5668999999999999999999964
No 378
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=57.93 E-value=15 Score=34.51 Aligned_cols=24 Identities=33% Similarity=0.332 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|-+|.++|-++.++|++|++|-+.
T Consensus 12 Gi~G~s~A~~L~~~g~~V~lie~~ 35 (376)
T PRK11259 12 GSMGSAAGYYLARRGLRVLGLDRF 35 (376)
T ss_pred CHHHHHHHHHHHHCCCeEEEEecc
Confidence 789999999999999999999864
No 379
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=57.90 E-value=51 Score=31.74 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=26.2
Q ss_pred EcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 41 IDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 41 IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+--.|||-+|.++|-++...|..++.+....
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~ 81 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPES 81 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3334889999999999999999999998544
No 380
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=57.89 E-value=11 Score=34.91 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..++..|++|+++-..
T Consensus 11 aG~mG~~iA~~la~~G~~V~l~d~~ 35 (287)
T PRK08293 11 AGVLGSQIAFQTAFHGFDVTIYDIS 35 (287)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 6999999999999999999999753
No 381
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=57.74 E-value=60 Score=30.68 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=26.6
Q ss_pred EcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 41 IDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 41 IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|--.|||-+|.++|-++..+|+.++++....
T Consensus 70 vv~aSsGN~g~alA~~a~~~G~~~~v~~p~~ 100 (317)
T TIGR02991 70 VVAASTGNHGRALAYAAAEEGVRATICMSEL 100 (317)
T ss_pred EEEECCCHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 3345899999999999999999999999543
No 382
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=57.67 E-value=17 Score=35.45 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=31.3
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCC--CeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMG--YAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~G--a~V~~i~g~ 70 (289)
.+.++|||+| +|..|..+.+++.++| .+|.++.-.
T Consensus 3 ~~~~vlVtGG------------------~GflG~hlv~~L~~~~~~~~irv~D~~ 39 (361)
T KOG1430|consen 3 KKLSVLVTGG------------------SGFLGQHLVQALLENELKLEIRVVDKT 39 (361)
T ss_pred cCCEEEEECC------------------ccHHHHHHHHHHHhcccccEEEEeccC
Confidence 5679999999 8999999999999999 888888754
No 383
>PRK08638 threonine dehydratase; Validated
Probab=57.66 E-value=34 Score=32.71 Aligned_cols=31 Identities=13% Similarity=0.184 Sum_probs=26.6
Q ss_pred EcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 41 IDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 41 IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|--.|||-+|.++|-++...|..++++....
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~ 108 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKG 108 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4446899999999999999999999998544
No 384
>cd01132 F1_ATPase_alpha F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The alpha subunit of the F1 ATP synthase can bind nucleotides, but is non-catalytic.
Probab=57.57 E-value=23 Score=33.25 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=32.2
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
-.+.|+|.+-...-|.. |+ -+..+|.++||+|..+|.+|.++.-+
T Consensus 125 ~~~tvvv~~t~d~~~~~----r~----~a~~~a~aiAE~fr~~G~~Vlvl~Ds 169 (274)
T cd01132 125 MEYTIVVAATASDPAPL----QY----LAPYTGCAMGEYFMDNGKHALIIYDD 169 (274)
T ss_pred cceeEEEEeCCCCchhH----HH----HHHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 34556666664444443 22 35668999999999999999999954
No 385
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=57.52 E-value=20 Score=35.63 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=39.9
Q ss_pred CCCcEEEEeCCCcccccC--C-CCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVPLE--Q-RCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID--~-~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
+.-++++|-.|++.-++. + ..-++++.. -.|..|..+|..|.++|.+|++|.+...+.|
T Consensus 135 ~~~d~lViATGs~p~~~p~~~~~~~~v~~~~~~~~~~~~~~~vvIiGgG~iG~E~A~~l~~~G~~Vtlv~~~~~il~ 211 (471)
T PRK06467 135 IEFDNAIIAAGSRPIQLPFIPHDDPRIWDSTDALELKEVPKRLLVMGGGIIGLEMGTVYHRLGSEVDVVEMFDQVIP 211 (471)
T ss_pred EEcCEEEEeCCCCCCCCCCCCCCCCcEEChHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEecCCCCCC
Confidence 456788888887653211 0 012333321 1689999999999999999999997665544
No 386
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=57.02 E-value=23 Score=34.76 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGTCE 74 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s~~ 74 (289)
|-.|..+|..+.++|.+|+++.+...+.
T Consensus 157 G~ig~E~A~~l~~~g~~Vtli~~~~~l~ 184 (438)
T PRK13512 157 GYISLEVLENLYERGLHPTLIHRSDKIN 184 (438)
T ss_pred CHHHHHHHHHHHhCCCcEEEEecccccc
Confidence 6689999999999999999999765433
No 387
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=56.80 E-value=12 Score=34.57 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..||..|+..|++|+++-.+
T Consensus 12 ~G~mG~~iA~~l~~~G~~V~~~d~~ 36 (295)
T PLN02545 12 AGQMGSGIAQLAAAAGMDVWLLDSD 36 (295)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 5999999999999999999988653
No 388
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=56.49 E-value=39 Score=29.34 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=30.7
Q ss_pred HHHHHHhhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 4 FANCVAFFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 4 ~~~~~~~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
++.+.+.-. .-+.||+++|.+= |+-|..+|+.|..+|+.|++.-.
T Consensus 10 ~d~i~r~t~--~~l~Gk~vvV~GY-------------------G~vG~g~A~~lr~~Ga~V~V~e~ 54 (162)
T PF00670_consen 10 VDGIMRATN--LMLAGKRVVVIGY-------------------GKVGKGIARALRGLGARVTVTEI 54 (162)
T ss_dssp HHHHHHHH---S--TTSEEEEE---------------------SHHHHHHHHHHHHTT-EEEEE-S
T ss_pred HHHHHhcCc--eeeCCCEEEEeCC-------------------CcccHHHHHHHhhCCCEEEEEEC
Confidence 344444432 4578999988764 88999999999999999998874
No 389
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=56.47 E-value=20 Score=29.09 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=23.7
Q ss_pred eeEcccchhHHHHHHHHHHHH-CCCeEEEEec
Q 022985 39 RYIDNFSSGHRGAASTEHLIK-MGYAVIFLYR 69 (289)
Q Consensus 39 R~IsN~SSG~~G~~iAe~~~~-~Ga~V~~i~g 69 (289)
|..=+=.+|+||..+++.+.+ .|+++.-...
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~ 33 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVD 33 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEe
Confidence 444455789999999999999 8888555543
No 390
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=56.39 E-value=26 Score=33.59 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=28.2
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+.|+|||++| |+.|..++.++.++|++|+++...
T Consensus 10 ~~~~~ilIiG~-------------------g~~~~~~~~a~~~~G~~v~~~~~~ 44 (395)
T PRK09288 10 PSATRVMLLGS-------------------GELGKEVAIEAQRLGVEVIAVDRY 44 (395)
T ss_pred CCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35678999977 346778888999999999988864
No 391
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=56.21 E-value=22 Score=33.27 Aligned_cols=27 Identities=7% Similarity=0.106 Sum_probs=24.8
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|+|=.|.++|-++..+|..++++....
T Consensus 61 s~GN~g~alA~~a~~~G~~~~i~v~~~ 87 (307)
T cd06449 61 IQSNHTRQVAAVAAKLGLKCVLVQENW 87 (307)
T ss_pred chhHHHHHHHHHHHHcCCeEEEEecCC
Confidence 789999999999999999999999754
No 392
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=56.19 E-value=32 Score=32.28 Aligned_cols=29 Identities=17% Similarity=0.290 Sum_probs=25.7
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
.|||-.|.++|-++...|+.++++.....
T Consensus 76 ~SsGN~g~alA~~a~~~G~~~~ivvp~~~ 104 (324)
T cd01563 76 ASTGNTSASLAAYAARAGIKCVVFLPAGK 104 (324)
T ss_pred eCCCHHHHHHHHHHHHcCCceEEEEeCCC
Confidence 48899999999999999999999996554
No 393
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=56.04 E-value=12 Score=34.31 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.+|..+|..+.+.|++|+++.+.
T Consensus 8 ~G~~G~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 8 AGAIGGLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5899999999999999999999974
No 394
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=56.02 E-value=23 Score=34.75 Aligned_cols=59 Identities=14% Similarity=0.054 Sum_probs=39.5
Q ss_pred CCCcEEEEeCCCcccccC---CCCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVPLE---QRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID---~~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
..-++++|..|++...+. ...+.+++.. -.|..|..+|..+.++|.+|+++.+...+.|
T Consensus 133 ~~~d~lViAtGs~p~~~pg~~~~~~~v~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 209 (462)
T PRK06416 133 YTAKNIILATGSRPRELPGIEIDGRVIWTSDEALNLDEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILP 209 (462)
T ss_pred EEeCEEEEeCCCCCCCCCCCCCCCCeEEcchHhhCccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCCcCC
Confidence 456788888887764321 1122222111 1688999999999999999999998655444
No 395
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.84 E-value=29 Score=32.73 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=37.2
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|.-+.++||.||..|..
T Consensus 144 av~~lL~~~~i~l~Gk~vvViGr------------------S~~VGkPla~lL~~~~AtVt~chs~ 191 (278)
T PRK14172 144 SVITLIKSLNIDIEGKEVVVIGR------------------SNIVGKPVAQLLLNENATVTICHSK 191 (278)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 44555652 23579999999876 5668999999999999999999964
No 396
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=55.74 E-value=1e+02 Score=27.48 Aligned_cols=28 Identities=18% Similarity=0.404 Sum_probs=25.1
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|||-+|.++|..+...|..++++..+..
T Consensus 57 ssGN~g~alA~~a~~~g~~~~v~~p~~~ 84 (244)
T cd00640 57 TGGNTGIALAAAAARLGLKCTIVMPEGA 84 (244)
T ss_pred CCcHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 6799999999999999999999997654
No 397
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=55.59 E-value=71 Score=29.68 Aligned_cols=28 Identities=25% Similarity=0.318 Sum_probs=25.3
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|||-+|.++|-++...|..++++....
T Consensus 64 aSsGN~g~alA~~a~~~G~~~~i~vp~~ 91 (299)
T TIGR01136 64 ATSGNTGIALAMVAAAKGYKLILTMPET 91 (299)
T ss_pred eCCChHHHHHHHHHHHcCCcEEEEECCC
Confidence 5899999999999999999999998654
No 398
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=55.54 E-value=21 Score=35.30 Aligned_cols=36 Identities=28% Similarity=0.464 Sum_probs=30.5
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
..||+|+|-+| |-.|..+|..+.+.|++|+++++..
T Consensus 270 ~~gk~VvVIGg-------------------G~~a~d~A~~l~~~G~~Vtlv~~~~ 305 (449)
T TIGR01316 270 YAGKSVVVIGG-------------------GNTAVDSARTALRLGAEVHCLYRRT 305 (449)
T ss_pred cCCCeEEEECC-------------------CHHHHHHHHHHHHcCCEEEEEeecC
Confidence 35788888888 4588899999999999999999754
No 399
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.43 E-value=29 Score=32.85 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=37.2
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|..+.++||.||..|..
T Consensus 141 avi~lL~~~~i~l~Gk~vvViGr------------------S~iVGkPla~lL~~~~aTVtichs~ 188 (287)
T PRK14173 141 GVVRLLKHYGIPLAGKEVVVVGR------------------SNIVGKPLAALLLREDATVTLAHSK 188 (287)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEeCCC
Confidence 45566653 23578999999765 6778999999999999999999964
No 400
>PRK14031 glutamate dehydrogenase; Provisional
Probab=55.41 E-value=35 Score=34.26 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=32.5
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+++|++|+|.++ |.-|...|+.+.+.|+.|+.|+-
T Consensus 224 ~~l~g~rVaVQGf-------------------GNVG~~aA~~L~e~GAkVVaVSD 259 (444)
T PRK14031 224 TDLKGKVCLVSGS-------------------GNVAQYTAEKVLELGGKVVTMSD 259 (444)
T ss_pred CCcCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEEC
Confidence 3589999999988 78999999999999999999884
No 401
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of animals, yeast, and a number of animal-resident bacteria.
Probab=55.31 E-value=23 Score=34.97 Aligned_cols=28 Identities=14% Similarity=0.154 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
.|-.|..+|..|...|.+|+++.+....
T Consensus 174 gG~iG~E~A~~l~~~g~~Vtli~~~~~i 201 (450)
T TIGR01421 174 AGYIAVELAGVLHGLGSETHLVIRHERV 201 (450)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEecCCCC
Confidence 6889999999999999999999976543
No 402
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.27 E-value=29 Score=32.81 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=36.7
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|..+.++|+.|+..|..
T Consensus 144 aii~lL~~~~i~l~Gk~vvViGr------------------s~iVGkPla~lL~~~~atVt~~hs~ 191 (285)
T PRK14189 144 GVMKMLESIGIPLRGAHAVVIGR------------------SNIVGKPMAMLLLQAGATVTICHSK 191 (285)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEecCC
Confidence 45556653 23579999999876 5667999999999999999998853
No 403
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=55.25 E-value=21 Score=39.48 Aligned_cols=36 Identities=25% Similarity=0.138 Sum_probs=31.4
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+||+|+|-+| |-=|.+.|.+++++||+|+++-+.
T Consensus 380 ~~tgKKVaVVGa-------------------GPAGLsAA~~La~~Gh~Vtv~E~~ 415 (1028)
T PRK06567 380 EPTNYNILVTGL-------------------GPAGFSLSYYLLRSGHNVTAIDGL 415 (1028)
T ss_pred CCCCCeEEEECc-------------------CHHHHHHHHHHHhCCCeEEEEccc
Confidence 358899999988 567899999999999999999863
No 404
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=54.97 E-value=20 Score=34.36 Aligned_cols=24 Identities=29% Similarity=0.325 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|-.|.++|.++.++|++|+++-+.
T Consensus 9 Gi~Gls~A~~l~~~g~~V~vle~~ 32 (416)
T PRK00711 9 GVIGVTSAWYLAQAGHEVTVIDRQ 32 (416)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 789999999999999999999875
No 405
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=54.89 E-value=11 Score=33.49 Aligned_cols=19 Identities=32% Similarity=0.270 Sum_probs=16.1
Q ss_pred HHHHHHHCCCeEEEEecCC
Q 022985 53 STEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 53 iAe~~~~~Ga~V~~i~g~~ 71 (289)
+|+.|+++|++|+++.++.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~ 19 (241)
T PRK12428 1 TARLLRFLGARVIGVDRRE 19 (241)
T ss_pred ChHHHHhCCCEEEEEeCCc
Confidence 5789999999999998753
No 406
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=54.88 E-value=26 Score=34.41 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=40.1
Q ss_pred CCCcEEEEeCCCcccc-----cCCCCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVP-----LEQRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~-----ID~~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
..-++++|-.|++.-. ++ .-++++.. -+|-.|..+|..+..+|.+|+++.+...+.|
T Consensus 136 ~~~d~lviATGs~p~~p~~~~~~--~~~v~~~~~~~~~~~~~~~v~IiGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 212 (461)
T PRK05249 136 LTADKIVIATGSRPYRPPDVDFD--HPRIYDSDSILSLDHLPRSLIIYGAGVIGCEYASIFAALGVKVTLINTRDRLLS 212 (461)
T ss_pred EEcCEEEEcCCCCCCCCCCCCCC--CCeEEcHHHhhchhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 4567888888876421 12 22333321 2688999999999999999999998665544
No 407
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=54.46 E-value=85 Score=28.92 Aligned_cols=28 Identities=21% Similarity=0.280 Sum_probs=25.5
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|||-.|.++|-++.+.|..++++....
T Consensus 59 ~SsGN~g~alA~~a~~~G~~~~i~vp~~ 86 (291)
T cd01561 59 PTSGNTGIGLAMVAAAKGYRFIIVMPET 86 (291)
T ss_pred eCCChHHHHHHHHHHHcCCeEEEEECCC
Confidence 4999999999999999999999999654
No 408
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.45 E-value=30 Score=32.75 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=37.3
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..+.++||.||..|..
T Consensus 143 avi~lL~~~~i~l~Gk~vvVvGr------------------S~iVGkPla~lL~~~~atVtichs~ 190 (284)
T PRK14170 143 GIIELIKSTGTQIEGKRAVVIGR------------------SNIVGKPVAQLLLNENATVTIAHSR 190 (284)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 45556652 23589999999876 5668999999999999999999964
No 409
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=54.40 E-value=21 Score=33.41 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=24.7
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|||=+|.++|-++..+|+.++++....
T Consensus 65 ssGN~g~alA~~a~~~G~~~~ivvp~~ 91 (311)
T TIGR01275 65 IQSNHARATALAAKKLGLDAVLVLREK 91 (311)
T ss_pred chhHHHHHHHHHHHHhCCceEEEecCC
Confidence 689999999999999999999999753
No 410
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=54.33 E-value=20 Score=34.44 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|-.|.++|.++.++|++|++|-+.
T Consensus 10 G~~G~~~A~~La~~g~~V~vle~~ 33 (410)
T PRK12409 10 GITGVTTAYALAQRGYQVTVFDRH 33 (410)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999999999999999764
No 411
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=54.14 E-value=26 Score=33.39 Aligned_cols=27 Identities=22% Similarity=0.276 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
|-.|..+|..+.++|.+|+++++...+
T Consensus 150 G~~g~e~A~~L~~~g~~Vtlv~~~~~~ 176 (377)
T PRK04965 150 GLIGTELAMDLCRAGKAVTLVDNAASL 176 (377)
T ss_pred CHHHHHHHHHHHhcCCeEEEEecCCcc
Confidence 568999999999999999999976543
No 412
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=54.10 E-value=15 Score=34.05 Aligned_cols=25 Identities=28% Similarity=0.314 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+.+.|++|+++.++
T Consensus 9 ~G~mG~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 9 AGSWGTALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5999999999999999999999875
No 413
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=53.81 E-value=13 Score=35.43 Aligned_cols=26 Identities=27% Similarity=0.376 Sum_probs=24.2
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|||-+|.++|-.+..+||.+++++-
T Consensus 68 ~TSGNTGI~LA~vaa~~Gy~~iivmP 93 (300)
T COG0031 68 ATSGNTGIALAMVAAAKGYRLIIVMP 93 (300)
T ss_pred cCCChHHHHHHHHHHHcCCcEEEEeC
Confidence 38999999999999999999999993
No 414
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=53.69 E-value=37 Score=33.05 Aligned_cols=45 Identities=24% Similarity=0.341 Sum_probs=33.5
Q ss_pred HHHHhhccCCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKCDYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+...+. +.....++|+|-++ |+.|..+|+.+.++|+.|+++-..
T Consensus 219 ~~~~~~~-~~~~~~~~iiIiG~-------------------G~~g~~l~~~L~~~~~~v~vid~~ 263 (453)
T PRK09496 219 AVMSEFG-RLEKPVKRVMIVGG-------------------GNIGYYLAKLLEKEGYSVKLIERD 263 (453)
T ss_pred HHHHHhC-ccCCCCCEEEEECC-------------------CHHHHHHHHHHHhCCCeEEEEECC
Confidence 3344444 23355677777776 899999999999999999999654
No 415
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=53.60 E-value=14 Score=37.54 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..||..+++.|+.|+++-..
T Consensus 13 aG~MG~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 13 AGAMGAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5999999999999999999998754
No 416
>PRK08198 threonine dehydratase; Provisional
Probab=53.58 E-value=67 Score=31.27 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=53.3
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCCCCCCCcCCCCCcccchhhhccCCccEEEeCccHHHHHHHHHHHHHhhhcccc
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLL 123 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P~~~~~p~~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~~~~~~~~~~~l 123 (289)
.|||-.|.++|-++...|..++++..... |. .-++.++.-+-..+.+.....+.+..+ .++.+ ..+..
T Consensus 76 aSsGN~g~alA~~a~~~G~~~~iv~p~~~--~~-------~k~~~~~~~GA~Vi~~~~~~~~~~~~a-~~~~~--~~g~~ 143 (404)
T PRK08198 76 ASAGNHAQGVAYAASLLGIKATIVMPETA--PL-------SKVKATRSYGAEVVLHGDVYDEALAKA-QELAE--ETGAT 143 (404)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCCC--CH-------HHHHHHHhCCCEEEEECCCHHHHHHHH-HHHHH--hcCCE
Confidence 58899999999999999999999995443 21 112222222222233322223333322 23322 24566
Q ss_pred cccccccHHHHHHHHHHHHHHhhhcCCcchhhhh
Q 022985 124 LKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLA 157 (289)
Q Consensus 124 l~~~f~t~~dy~~~l~~i~~~~~~~~~~d~~i~a 157 (289)
+..+|+...-....-....+.+++.++.|.+|.+
T Consensus 144 ~~~~~~~~~~~~g~~t~a~EI~~q~~~~d~vv~~ 177 (404)
T PRK08198 144 FVHPFDDPDVIAGQGTIGLEILEDLPDVDTVVVP 177 (404)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 7778875543322211222233445556655544
No 417
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.34 E-value=32 Score=32.71 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=37.1
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..+.++||.||..|..
T Consensus 146 avi~lL~~~~i~l~Gk~vvViGr------------------S~iVGkPla~lL~~~~aTVt~chs~ 193 (294)
T PRK14187 146 GCLYLIKTITRNLSGSDAVVIGR------------------SNIVGKPMACLLLGENCTVTTVHSA 193 (294)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CccchHHHHHHHhhCCCEEEEeCCC
Confidence 34455552 24589999998876 6678999999999999999999964
No 418
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=53.26 E-value=23 Score=33.57 Aligned_cols=27 Identities=11% Similarity=0.249 Sum_probs=24.6
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
|||=.|.++|-++...|+.++++....
T Consensus 73 s~gN~g~alA~~a~~~G~~~~i~vp~~ 99 (331)
T PRK03910 73 IQSNHARQTAAAAAKLGLKCVLLLENP 99 (331)
T ss_pred chhHHHHHHHHHHHHhCCcEEEEEcCC
Confidence 689999999999999999999999654
No 419
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.95 E-value=34 Score=32.57 Aligned_cols=47 Identities=15% Similarity=0.119 Sum_probs=37.2
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..+.++||.||..|..
T Consensus 144 aii~lL~~~~i~l~Gk~vvVIGr------------------S~iVGkPla~lL~~~~atVtv~hs~ 191 (297)
T PRK14186 144 GVMRLLRSQQIDIAGKKAVVVGR------------------SILVGKPLALMLLAANATVTIAHSR 191 (297)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 45556652 23578999999876 6678999999999999999999964
No 420
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=52.87 E-value=15 Score=33.91 Aligned_cols=25 Identities=24% Similarity=0.271 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+++.|++|+.+.++
T Consensus 7 ~G~mG~~iA~~l~~~G~~V~~~dr~ 31 (291)
T TIGR01505 7 LGIMGSPMSINLAKAGYQLHVTTIG 31 (291)
T ss_pred ecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 6999999999999999999987654
No 421
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.83 E-value=34 Score=32.29 Aligned_cols=46 Identities=13% Similarity=0.148 Sum_probs=36.6
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|..+.++||.||..|.
T Consensus 144 av~~lL~~~~i~l~Gk~vvViGr------------------S~iVG~Pla~lL~~~~atVt~chs 190 (284)
T PRK14190 144 GILELLKEYNIDISGKHVVVVGR------------------SNIVGKPVGQLLLNENATVTYCHS 190 (284)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CCccHHHHHHHHHHCCCEEEEEeC
Confidence 34555552 23589999999876 677899999999999999999985
No 422
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.80 E-value=33 Score=32.37 Aligned_cols=47 Identities=15% Similarity=0.192 Sum_probs=36.9
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..|.++||.||..|..
T Consensus 143 avi~lL~~y~i~l~Gk~vvVvGr------------------S~iVGkPla~lL~~~~atVt~chs~ 190 (282)
T PRK14166 143 GVMKLLKAYEIDLEGKDAVIIGA------------------SNIVGRPMATMLLNAGATVSVCHIK 190 (282)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 44556652 23589999999765 6678999999999999999999963
No 423
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.63 E-value=32 Score=32.57 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=36.7
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..+.++||.||..|..
T Consensus 145 av~~lL~~y~i~l~GK~vvViGr------------------S~iVGkPla~lL~~~~ATVtichs~ 192 (288)
T PRK14171 145 GCLAVIKKYEPNLTGKNVVIIGR------------------SNIVGKPLSALLLKENCSVTICHSK 192 (288)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 34455542 23589999999876 5668999999999999999999964
No 424
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=52.57 E-value=16 Score=34.29 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||.++|..+.+.|++|+++.++
T Consensus 8 aGa~G~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 8 AGSFGTAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEecC
Confidence 5899999999999999999999874
No 425
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.54 E-value=35 Score=32.21 Aligned_cols=47 Identities=11% Similarity=0.157 Sum_probs=37.0
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..+.++||.||..|..
T Consensus 142 avi~lL~~~~i~l~Gk~vvViGr------------------S~iVGkPla~lL~~~~atVtichs~ 189 (282)
T PRK14169 142 GIMALLDAYDIDVAGKRVVIVGR------------------SNIVGRPLAGLMVNHDATVTIAHSK 189 (282)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEECCC
Confidence 34555652 23579999999765 6678999999999999999999964
No 426
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.29 E-value=34 Score=32.38 Aligned_cols=47 Identities=21% Similarity=0.152 Sum_probs=37.0
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |+.-|.-+|..+.++||.||..|..
T Consensus 145 avi~ll~~y~i~l~Gk~vvViGr------------------S~iVGkPla~lL~~~~atVt~chs~ 192 (284)
T PRK14177 145 GMVLLLKEYGIDVTGKNAVVVGR------------------SPILGKPMAMLLTEMNATVTLCHSK 192 (284)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 34455542 24689999999876 6678999999999999999999953
No 427
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=52.29 E-value=14 Score=33.94 Aligned_cols=24 Identities=21% Similarity=0.350 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEec
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.|.||..+|..++++|++|+++-.
T Consensus 11 ~G~mG~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 11 AGTMGNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cCHHHHHHHHHHHHCCCceEEEeC
Confidence 699999999999999999999864
No 428
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=51.65 E-value=32 Score=34.00 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=39.2
Q ss_pred CCcEEEEeCCCcccccC---CCCeeeEcccc---------------hhHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 022985 18 TRRVACVTSGGTTVPLE---QRCVRYIDNFS---------------SGHRGAASTEHLIKMGYAVIFLYRRGTCE 74 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID---~~~VR~IsN~S---------------SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~ 74 (289)
.-++++|-.|.+....+ ...++++++.. .|..|..+|..|.+.|.+|+++.+...+.
T Consensus 131 ~~d~lIiATGs~p~~p~~~~~~~~~~~~~~~~~~l~~~~k~vvVIGgG~ig~E~A~~l~~~G~~Vtli~~~~~ll 205 (452)
T TIGR03452 131 TGDQIVIAAGSRPYIPPAIADSGVRYHTNEDIMRLPELPESLVIVGGGYIAAEFAHVFSALGTRVTIVNRSTKLL 205 (452)
T ss_pred EeCEEEEEECCCCCCCCCCCCCCCEEEcHHHHHhhhhcCCcEEEECCCHHHHHHHHHHHhCCCcEEEEEccCccc
Confidence 34677887776643211 11455555421 68899999999999999999999755433
No 429
>PRK08655 prephenate dehydrogenase; Provisional
Probab=51.63 E-value=24 Score=35.02 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+|.||.++|..+..+|++|+++.++
T Consensus 9 ~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 9 TGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 6899999999999999999988764
No 430
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=51.48 E-value=14 Score=34.72 Aligned_cols=25 Identities=24% Similarity=0.275 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+.++|++|+++.++
T Consensus 10 ~G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 10 AGSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CCHHHHHHHHHHHhcCCcEEEEecH
Confidence 6999999999999999999999875
No 431
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=51.11 E-value=32 Score=34.13 Aligned_cols=59 Identities=20% Similarity=0.242 Sum_probs=40.4
Q ss_pred CCCcEEEEeCCCcccccC--C-CCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVPLE--Q-RCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID--~-~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
..-++++|..|.+...+. . ..-++++.. -.|..|..+|..|.+.|.+|+++.+...+.|
T Consensus 138 ~~~d~lViATGs~p~~~p~~~~~~~~v~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtli~~~~~~l~ 214 (466)
T PRK07845 138 LDADVVLIATGASPRILPTAEPDGERILTWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSSRDRVLP 214 (466)
T ss_pred EecCEEEEcCCCCCCCCCCCCCCCceEEeehhhhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcCCC
Confidence 457889998888764221 0 011222211 2788999999999999999999997655444
No 432
>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.
Probab=51.10 E-value=32 Score=32.38 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=34.9
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC-CCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 70 (289)
-.+.|+|.+-...-|.. | .-...+|.++||+|..+ |.+|.+++-+
T Consensus 129 l~~tv~v~~t~~~~~~~----r----~~a~~~a~aiAEyfrd~~g~~VLl~~D~ 174 (276)
T cd01135 129 LERVVLFLNLANDPTIE----R----IITPRMALTTAEYLAYEKGKHVLVILTD 174 (276)
T ss_pred cceEEEEEecCCCCHHH----H----HHHHHHHHHHHHHHHhccCCeEEEEEcC
Confidence 34677777776666665 2 24678999999999997 9999999954
No 433
>PRK08246 threonine dehydratase; Provisional
Probab=50.98 E-value=71 Score=30.05 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=27.6
Q ss_pred eeEcccchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 39 RYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 39 R~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
+.|--.|||-.|.++|-++...|..++++....
T Consensus 69 ~~vv~aSsGN~g~a~A~~a~~~G~~~~iv~p~~ 101 (310)
T PRK08246 69 AGVVAASGGNAGLAVAYAAAALGVPATVFVPET 101 (310)
T ss_pred CeEEEeCCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 334445899999999999999999999999644
No 434
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=50.52 E-value=13 Score=35.58 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=23.0
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
-+|.||..||..++..|++|++.-.+
T Consensus 10 GaG~MG~gIA~~~A~~G~~V~l~D~~ 35 (307)
T COG1250 10 GAGVMGAGIAAVFALAGYDVVLKDIS 35 (307)
T ss_pred cccchhHHHHHHHhhcCCceEEEeCC
Confidence 46899999999999988999998854
No 435
>TIGR02053 MerA mercuric reductase. This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH.
Probab=50.33 E-value=29 Score=34.17 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.|..|..+|..+.++|.+|+++.+.....|
T Consensus 174 gG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 203 (463)
T TIGR02053 174 GGAIGVELAQAFARLGSEVTILQRSDRLLP 203 (463)
T ss_pred CCHHHHHHHHHHHHcCCcEEEEEcCCcCCC
Confidence 788999999999999999999998655444
No 436
>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria.
Probab=50.02 E-value=17 Score=35.69 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+..+|.++||+|..+|++|.+++-+
T Consensus 238 s~yta~tiAEYfrd~G~dVll~~Ds 262 (369)
T cd01134 238 SIYTGITIAEYFRDMGYNVALMADS 262 (369)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 6789999999999999999999853
No 437
>PRK04192 V-type ATP synthase subunit A; Provisional
Probab=50.01 E-value=15 Score=38.12 Aligned_cols=27 Identities=26% Similarity=0.331 Sum_probs=24.2
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|..+|.++||+|+.+|++|.+++-+.
T Consensus 307 ~s~ytgiTiAEYfRd~G~~Vllm~DSt 333 (586)
T PRK04192 307 ASIYTGITIAEYYRDMGYDVLLMADST 333 (586)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEecCh
Confidence 478899999999999999999998653
No 438
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=49.93 E-value=39 Score=32.15 Aligned_cols=47 Identities=19% Similarity=0.215 Sum_probs=37.1
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+- |..-|.-+|..+.++||.||..|..
T Consensus 153 avi~lL~~~~i~l~Gk~vvVIGR------------------S~iVGkPla~lL~~~~ATVtvchs~ 200 (299)
T PLN02516 153 GCLELLSRSGIPIKGKKAVVVGR------------------SNIVGLPVSLLLLKADATVTVVHSR 200 (299)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEeCCC
Confidence 34555652 24688999999875 5668999999999999999999964
No 439
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=49.83 E-value=21 Score=32.95 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=24.6
Q ss_pred EcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 41 IDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 41 IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|.=.=.|.||..+|..++.+|++|+++-.+
T Consensus 6 I~ViGaG~mG~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 6 IGVVGSGVMGQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred EEEECccHHHHHHHHHHHhcCCeEEEEeCC
Confidence 333346999999999999999999988753
No 440
>TIGR01041 ATP_syn_B_arch ATP synthase archaeal, B subunit. Archaeal ATP synthase shares extensive sequence similarity with eukaryotic and prokaryotic V-type (H+)-ATPases.
Probab=49.71 E-value=29 Score=34.96 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=35.4
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHH-HCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI-KMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~-~~Ga~V~~i~g~ 70 (289)
-.+.|+|.+-...-|+. -..+..+|.++||+|. .+|.+|.++.-+
T Consensus 201 l~rtvvv~atsd~p~~~--------R~~a~~~a~tiAEyfr~d~G~~VLli~Ds 246 (458)
T TIGR01041 201 LERAVVFLNLADDPAVE--------RIVTPRMALTAAEYLAFEKDMHVLVILTD 246 (458)
T ss_pred cceEEEEEECCCCCHHH--------HHHHHHHHHHHHHHHHHccCCcEEEEEcC
Confidence 34677777776666666 2357889999999999 799999999854
No 441
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=49.66 E-value=34 Score=33.37 Aligned_cols=30 Identities=27% Similarity=0.261 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.|-.|..+|..+.+.|.+|+++.+...+.|
T Consensus 165 gG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 194 (438)
T PRK07251 165 GGNIGLEFAGLYNKLGSKVTVLDAASTILP 194 (438)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEecCCccCC
Confidence 678899999999999999999998665544
No 442
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=49.57 E-value=18 Score=33.39 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+++.|++|++..++
T Consensus 4 lG~mG~~mA~~L~~~G~~V~v~dr~ 28 (288)
T TIGR01692 4 LGNMGGPMAANLLKAGHPVRVFDLF 28 (288)
T ss_pred ccHhHHHHHHHHHhCCCeEEEEeCC
Confidence 6999999999999999999888654
No 443
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=49.42 E-value=37 Score=34.40 Aligned_cols=25 Identities=20% Similarity=0.046 Sum_probs=22.5
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEec
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
|--.....+|+++.+|||+||++.-
T Consensus 33 SH~~~~~~l~~~La~rGH~VTvi~p 57 (507)
T PHA03392 33 SHHSVFKVYVEALAERGHNVTVIKP 57 (507)
T ss_pred cHHHHHHHHHHHHHHcCCeEEEEec
Confidence 7777899999999999999999963
No 444
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=49.40 E-value=23 Score=35.64 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|-.|+++|..+.++|.+|++|-+.
T Consensus 15 Gi~G~~~A~~la~rGl~V~LvEk~ 38 (508)
T PRK12266 15 GINGAGIARDAAGRGLSVLLCEQD 38 (508)
T ss_pred CHHHHHHHHHHHHCCCeEEEEecC
Confidence 789999999999999999999874
No 445
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=49.25 E-value=38 Score=33.12 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.|-.|..+|..+.+.|.+|+++.+.....|
T Consensus 166 gG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 195 (441)
T PRK08010 166 GGYIGVEFASMFANFGSKVTILEAASLFLP 195 (441)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 688999999999999999999998655544
No 446
>PTZ00153 lipoamide dehydrogenase; Provisional
Probab=49.19 E-value=30 Score=36.39 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
.|..|..+|+.+...|.+|++|.+...+.|
T Consensus 320 gG~iGvE~A~~l~~~G~eVTLIe~~~~ll~ 349 (659)
T PTZ00153 320 MGIIGLEFMDIYTALGSEVVSFEYSPQLLP 349 (659)
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeccCcccc
Confidence 688999999999999999999998766555
No 447
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=49.00 E-value=28 Score=33.03 Aligned_cols=26 Identities=4% Similarity=0.135 Sum_probs=23.7
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|||-+|.++|-++...|+.++++...
T Consensus 76 s~GN~g~alA~aa~~~G~~~~iv~~~ 101 (337)
T PRK12390 76 VQSNHTRQVAAVAAHLGMKCVLVQEN 101 (337)
T ss_pred CccHHHHHHHHHHHHcCCeEEEEeCC
Confidence 78999999999999999999999743
No 448
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=48.99 E-value=18 Score=38.34 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=31.1
Q ss_pred CCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 36 RCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 36 ~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.+||-|.=-=.|.||..||..|+..|+.|+++-..
T Consensus 311 ~~i~~v~ViGaG~mG~gIA~~~a~~G~~V~l~d~~ 345 (714)
T TIGR02437 311 KDVKQAAVLGAGIMGGGIAYQSASKGTPIVMKDIN 345 (714)
T ss_pred cccceEEEECCchHHHHHHHHHHhCCCeEEEEeCC
Confidence 36888888889999999999999999999999854
No 449
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=48.96 E-value=35 Score=33.77 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=40.1
Q ss_pred CCCcEEEEeCCCcccc-----cCCCCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVP-----LEQRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~-----ID~~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
..-++++|-.|+...+ +| .+++++.. =.|-.|..+|..+.+.|.+|+++.+.....|
T Consensus 141 ~~~d~lViATGs~p~~~p~~~~~--~~~~~~~~~~~~~~~~~~~vvIIGgG~~G~E~A~~l~~~g~~Vtli~~~~~il~ 217 (472)
T PRK05976 141 IIPENLLIATGSRPVELPGLPFD--GEYVISSDEALSLETLPKSLVIVGGGVIGLEWASMLADFGVEVTVVEAADRILP 217 (472)
T ss_pred EEcCEEEEeCCCCCCCCCCCCCC--CceEEcchHhhCccccCCEEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccCC
Confidence 4567888888876532 23 33444332 1578899999999999999999987655444
No 450
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=48.41 E-value=32 Score=35.59 Aligned_cols=50 Identities=16% Similarity=0.088 Sum_probs=43.3
Q ss_pred CcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 19 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 19 ~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
.|+++||+.--. +|.+-.|.+..|--.+-.+|++...+|++|.||+|...
T Consensus 4 ~~~~~VTtalpY----~Ng~~HlGH~~~~l~ADv~aRy~Rl~G~~v~fvtGtDe 53 (558)
T COG0143 4 MKKILVTTALPY----PNGPPHLGHLYTYLAADVYARYLRLRGYEVFFLTGTDE 53 (558)
T ss_pred CCcEEEecCCCC----CCCCcchhhHHHHHHHHHHHHHHHhcCCeEEEEeccCC
Confidence 478999987443 35889999999999999999999999999999999765
No 451
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=48.41 E-value=33 Score=31.93 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=31.5
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
|..++.+|.+.|.-. |=+.|.++++++.+.||+|.++.-
T Consensus 5 ~i~vl~gg~s~e~~v-----------sl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 5 KIVVLYGGDSPEREV-----------SLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred EEEEEeCCCCCchHh-----------HHHHHHHHHHHHHHcCCEEEEEcC
Confidence 567777777777766 446889999999999999988853
No 452
>PRK10637 cysG siroheme synthase; Provisional
Probab=48.35 E-value=34 Score=34.13 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=30.2
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+++||+|||-+| |.-|..=++.|++.|++|++|+-.
T Consensus 9 ~l~~~~vlvvGg-------------------G~vA~rk~~~ll~~ga~v~visp~ 44 (457)
T PRK10637 9 QLRDRDCLLVGG-------------------GDVAERKARLLLDAGARLTVNALA 44 (457)
T ss_pred EcCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEcCC
Confidence 589999999999 667777788888999999988743
No 453
>TIGR01043 ATP_syn_A_arch ATP synthase archaeal, A subunit. Archaeal ATP synthase shares extensive sequence similarity with eukaryotic and prokaryotic V-type (H+)-ATPases.
Probab=48.33 E-value=17 Score=37.65 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=23.7
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|-.+|.++||+|..+|++|.+++-+
T Consensus 302 ~s~ytg~TiAEYfRD~G~~Vllm~DS 327 (578)
T TIGR01043 302 ASIYTGITIAEYFRDMGYDVALMADS 327 (578)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 47889999999999999999999955
No 454
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=48.31 E-value=21 Score=32.63 Aligned_cols=25 Identities=28% Similarity=0.410 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|-.|.++|-++.++|++|+++-..
T Consensus 7 aGi~G~~~A~~La~~G~~V~l~e~~ 31 (358)
T PF01266_consen 7 AGIAGLSTAYELARRGHSVTLLERG 31 (358)
T ss_dssp TSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeec
Confidence 3889999999999999999999976
No 455
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=48.17 E-value=88 Score=28.98 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=25.2
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|||-.|.++|-++...|..++++....
T Consensus 63 aSsGN~g~alA~~a~~~Gl~~~i~vp~~ 90 (298)
T TIGR01139 63 PTSGNTGIALAMVAAARGYKLILTMPET 90 (298)
T ss_pred eCCChhHHHHHHHHHHcCCeEEEEeCCc
Confidence 3899999999999999999999998654
No 456
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=48.05 E-value=62 Score=28.91 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=29.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..|..|+|+++ +|-+|.++++.+..+|++|+++.+.
T Consensus 138 ~~~~~vlv~g~------------------~~~~g~~~~~~a~~~g~~v~~~~~~ 173 (325)
T TIGR02824 138 KAGETVLIHGG------------------ASGIGTTAIQLAKAFGARVFTTAGS 173 (325)
T ss_pred CCCCEEEEEcC------------------cchHHHHHHHHHHHcCCEEEEEeCC
Confidence 45778888865 3569999999999999999888764
No 457
>PLN02507 glutathione reductase
Probab=47.63 E-value=37 Score=34.14 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
.|..|..+|..+...|.+|+++++....
T Consensus 211 gG~ig~E~A~~l~~~G~~Vtli~~~~~~ 238 (499)
T PLN02507 211 GGYIAVEFASIWRGMGATVDLFFRKELP 238 (499)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEecCCc
Confidence 6889999999999999999999976543
No 458
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=47.48 E-value=22 Score=32.79 Aligned_cols=25 Identities=28% Similarity=0.256 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+.++|++|+.+.+.
T Consensus 8 ~G~mG~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 8 LGLIGGSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred ecHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999988764
No 459
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=47.47 E-value=37 Score=31.54 Aligned_cols=36 Identities=17% Similarity=0.058 Sum_probs=29.4
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..|..|||+++ +|..|.++++.+..+|+.|+.+.+.
T Consensus 150 ~~g~~VlI~Ga------------------~G~vG~~aiqlAk~~G~~Vi~~~~~ 185 (338)
T cd08295 150 KKGETVFVSAA------------------SGAVGQLVGQLAKLKGCYVVGSAGS 185 (338)
T ss_pred CCCCEEEEecC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999876 4668999999999999998887654
No 460
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=47.46 E-value=18 Score=36.43 Aligned_cols=26 Identities=15% Similarity=0.229 Sum_probs=23.0
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
=+|.||..+|..|+++|++|++.-..
T Consensus 11 G~G~MG~~iA~~la~~G~~V~v~D~~ 36 (495)
T PRK07531 11 GGGVIGGGWAARFLLAGIDVAVFDPH 36 (495)
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 37999999999999999999988653
No 461
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=47.43 E-value=38 Score=33.61 Aligned_cols=59 Identities=17% Similarity=0.105 Sum_probs=40.9
Q ss_pred CCCcEEEEeCCCcccccC---CCCeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVPLE---QRCVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID---~~~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
...++++|-.|....++. ....+++++. -.|-.|..+|..+.+.|.+|+++.+...+.|
T Consensus 144 ~~~d~lViATGs~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 220 (475)
T PRK06327 144 ITAKHVIIATGSEPRHLPGVPFDNKIILDNTGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFLA 220 (475)
T ss_pred EEeCEEEEeCCCCCCCCCCCCCCCceEECcHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEeCCCccCC
Confidence 467889998888764321 0023344332 1688999999999999999999987655433
No 462
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=47.39 E-value=21 Score=33.24 Aligned_cols=25 Identities=20% Similarity=0.312 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.||..+|..+++.|++|+++.++
T Consensus 9 lG~mG~~mA~~l~~~G~~V~v~d~~ 33 (296)
T PRK15461 9 LGQMGSPMASNLLKQGHQLQVFDVN 33 (296)
T ss_pred eCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 7999999999999999999887654
No 463
>PTZ00058 glutathione reductase; Provisional
Probab=47.26 E-value=34 Score=35.25 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=39.1
Q ss_pred CCCcEEEEeCCCcccc--cCCCCe-eeEcc---------c-----chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVP--LEQRCV-RYIDN---------F-----SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~--ID~~~V-R~IsN---------~-----SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
+.-++++|-.|.+... |. .. +.+++ . -.|..|..+|+.|...|.+|+++.+...+.|
T Consensus 201 i~ad~lVIATGS~P~~P~Ip--G~~~v~ts~~~~~l~~pk~VvIIGgG~iGlE~A~~l~~~G~~Vtli~~~~~il~ 274 (561)
T PTZ00058 201 IEGKNILIAVGNKPIFPDVK--GKEFTISSDDFFKIKEAKRIGIAGSGYIAVELINVVNRLGAESYIFARGNRLLR 274 (561)
T ss_pred EECCEEEEecCCCCCCCCCC--CceeEEEHHHHhhccCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecccccc
Confidence 4567888888876532 22 21 12221 1 1688999999999999999999998655444
No 464
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product. Glutaminase domains have evolved from the same ancestor, whereas the synthetase domains are evolutionarily unrelated and have different functions. This protein family is classified based on the N-terminal synthetase domain.
Probab=47.26 E-value=35 Score=31.77 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=31.6
Q ss_pred cEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEe
Q 022985 20 RVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLY 68 (289)
Q Consensus 20 k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~ 68 (289)
|-|+||+| .+|..-.|...++++..+..+|+.|+.+-
T Consensus 1 kyi~vtGg------------v~s~lgkgi~~as~g~ll~~~g~~v~~~K 37 (255)
T cd03113 1 KYIFVTGG------------VVSSLGKGITAASLGRLLKARGLKVTAQK 37 (255)
T ss_pred CEEEEeCC------------cccCcchHHHHHHHHHHHHHCCCeEEEEe
Confidence 56889988 35556689999999999999999999987
No 465
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=47.24 E-value=60 Score=31.47 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=30.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCe-EEEEecCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYA-VIFLYRRG 71 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~-V~~i~g~~ 71 (289)
++.+|+|||-+- |.||...|+++..+|+. |++.-|..
T Consensus 171 ~l~~k~vLvIGa-------------------Gem~~l~a~~L~~~g~~~i~v~nRt~ 208 (338)
T PRK00676 171 KSKKASLLFIGY-------------------SEINRKVAYYLQRQGYSRITFCSRQQ 208 (338)
T ss_pred CccCCEEEEEcc-------------------cHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 588999998765 89999999999999965 66665543
No 466
>CHL00059 atpA ATP synthase CF1 alpha subunit
Probab=47.22 E-value=29 Score=35.31 Aligned_cols=45 Identities=18% Similarity=0.230 Sum_probs=35.2
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
-.+.|+|.+.+..-|.. |+ -+..+|.++||+|..+|.+|.+++-.
T Consensus 197 l~~tvvV~atad~~~~~----r~----~ap~~a~aiAEyfr~~G~~VLlv~Dd 241 (485)
T CHL00059 197 MEYTIVVAETADSPATL----QY----LAPYTGAALAEYFMYRGRHTLIIYDD 241 (485)
T ss_pred hhceEEEEeCCCCCHHH----HH----HHHHHHhhHHHHHHHcCCCEEEEEcC
Confidence 34678888876666655 33 36678999999999999999999865
No 467
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=47.19 E-value=21 Score=33.36 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|.+|..+|-.+.+.|++|+++.+.
T Consensus 13 ~GaiG~~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 13 TGAIGGFYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 4889999999999999999999985
No 468
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=47.16 E-value=26 Score=35.68 Aligned_cols=24 Identities=25% Similarity=0.349 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|-.|+++|.++.++|.+|++|-+.
T Consensus 15 Gi~G~~iA~~La~rG~~V~LlEk~ 38 (546)
T PRK11101 15 GATGAGIARDCALRGLRCILVERH 38 (546)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECC
Confidence 789999999999999999999864
No 469
>PRK10717 cysteine synthase A; Provisional
Probab=47.09 E-value=1.1e+02 Score=28.81 Aligned_cols=28 Identities=14% Similarity=0.228 Sum_probs=25.5
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|||-+|.++|-++...|..++++....
T Consensus 70 aSsGN~g~alA~~a~~~G~~~~vv~p~~ 97 (330)
T PRK10717 70 GTAGNTGIGLALVAAARGYKTVIVMPET 97 (330)
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 5899999999999999999999999654
No 470
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=46.82 E-value=52 Score=31.88 Aligned_cols=26 Identities=27% Similarity=0.309 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|-.|..+|..+.++|.+|+++.+...
T Consensus 146 G~~g~e~A~~l~~~g~~Vtli~~~~~ 171 (427)
T TIGR03385 146 GYIGIEMAEALRERGKNVTLIHRSER 171 (427)
T ss_pred CHHHHHHHHHHHhCCCcEEEEECCcc
Confidence 34788999999999999999997543
No 471
>cd01133 F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.
Probab=46.70 E-value=37 Score=31.90 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=33.8
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHC-CCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKM-GYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~-Ga~V~~i~g~ 70 (289)
-.+.|+|.+-...-|.. | ..+..+|.++||+|... |.+|.++.-+
T Consensus 126 ~~~tvvv~~t~d~~~~~----r----~~~~~~a~~~AEyfr~~~g~~Vl~~~Ds 171 (274)
T cd01133 126 LSKTALVYGQMNEPPGA----R----ARVALTGLTMAEYFRDEEGQDVLLFIDN 171 (274)
T ss_pred cceeEEEEECCCCCHHH----H----HHHHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence 34567777666555555 1 24578999999999998 9999999954
No 472
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.68 E-value=48 Score=31.31 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=37.0
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|..+|.. .-++.||+|+|-+. |..-|.-+|..+.++||.|+..|..
T Consensus 143 avi~ll~~~~i~l~Gk~vvViGr------------------S~iVGkPla~lL~~~~AtVtichs~ 190 (282)
T PRK14182 143 GVMRMLDEARVDPKGKRALVVGR------------------SNIVGKPMAMMLLERHATVTIAHSR 190 (282)
T ss_pred HHHHHHHHhCCCCCCCEEEEECC------------------CCcchHHHHHHHHHCCCEEEEeCCC
Confidence 34555552 23589999999876 5668999999999999999999863
No 473
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=46.62 E-value=30 Score=25.04 Aligned_cols=27 Identities=30% Similarity=0.427 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
+|--|.+.|-++.++|++|+++=+...
T Consensus 4 aG~sGl~aA~~L~~~g~~v~v~E~~~~ 30 (68)
T PF13450_consen 4 AGISGLAAAYYLAKAGYRVTVFEKNDR 30 (68)
T ss_dssp -SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred eCHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 578899999999999999999997654
No 474
>PRK08526 threonine dehydratase; Provisional
Probab=46.42 E-value=1.2e+02 Score=29.95 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=25.5
Q ss_pred cchhHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 44 FSSGHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 44 ~SSG~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
.|+|-.|.++|-++...|..+++++...
T Consensus 74 aSaGNhg~avA~aa~~~Gi~~~IvmP~~ 101 (403)
T PRK08526 74 ASAGNHAQGVAISAKKFGIKAVIVMPEA 101 (403)
T ss_pred ECccHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5999999999999999999999999543
No 475
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=46.31 E-value=56 Score=27.97 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=30.8
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.|++|.|-+- |..|.++|+.+...|.+|+++.+.
T Consensus 32 ~~l~g~tvgIiG~-------------------G~IG~~vA~~l~~fG~~V~~~d~~ 68 (178)
T PF02826_consen 32 RELRGKTVGIIGY-------------------GRIGRAVARRLKAFGMRVIGYDRS 68 (178)
T ss_dssp S-STTSEEEEEST-------------------SHHHHHHHHHHHHTT-EEEEEESS
T ss_pred cccCCCEEEEEEE-------------------cCCcCeEeeeeecCCceeEEeccc
Confidence 4578889888865 899999999999999999999864
No 476
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=46.21 E-value=27 Score=27.41 Aligned_cols=25 Identities=12% Similarity=-0.004 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRG 71 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~ 71 (289)
++.-..+|+++.++|++|+++....
T Consensus 4 ~~~~~~l~~~L~~~G~~V~v~~~~~ 28 (160)
T PF13579_consen 4 ERYVRELARALAARGHEVTVVTPQP 28 (160)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEEE--
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 5677889999999999999999643
No 477
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.17 E-value=45 Score=31.42 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=36.1
Q ss_pred HHHHhhcc-CCCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 6 NCVAFFKC-DYEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 6 ~~~~~~~~-~~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+..+|.. .-++.||+|+|.+. |...|..+|..+..+|+.|+..|.
T Consensus 138 av~~ll~~~~i~l~Gk~V~ViGr------------------s~~vGrpla~lL~~~~atVtv~hs 184 (279)
T PRK14178 138 GIMTLLHEYKISIAGKRAVVVGR------------------SIDVGRPMAALLLNADATVTICHS 184 (279)
T ss_pred HHHHHHHHcCCCCCCCEEEEECC------------------CccccHHHHHHHHhCCCeeEEEec
Confidence 34455542 23589999999876 556899999999999999999995
No 478
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=46.09 E-value=37 Score=33.52 Aligned_cols=35 Identities=26% Similarity=0.530 Sum_probs=29.2
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCC-eEEEEecCC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGY-AVIFLYRRG 71 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga-~V~~i~g~~ 71 (289)
.+++|+|-+| |-.|..+|..+.+.|+ +|+++++..
T Consensus 272 ~g~~VvViGg-------------------G~~g~e~A~~l~~~G~~~Vtlv~~~~ 307 (457)
T PRK11749 272 VGKRVVVIGG-------------------GNTAMDAARTAKRLGAESVTIVYRRG 307 (457)
T ss_pred CCCeEEEECC-------------------CHHHHHHHHHHHHcCCCeEEEeeecC
Confidence 5778888777 4578999999999999 899999753
No 479
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=46.06 E-value=41 Score=30.52 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..+.+|||++| +|..|.++++.+...|+.|+.+.+.
T Consensus 161 ~~~~~vlI~ga------------------~g~vG~~~~~~a~~~g~~v~~~~~~ 196 (332)
T cd08259 161 KKGDTVLVTGA------------------GGGVGIHAIQLAKALGARVIAVTRS 196 (332)
T ss_pred CCCCEEEEECC------------------CCHHHHHHHHHHHHcCCeEEEEeCC
Confidence 45678888866 5669999999999999999887753
No 480
>PRK13343 F0F1 ATP synthase subunit alpha; Provisional
Probab=46.02 E-value=35 Score=34.81 Aligned_cols=45 Identities=18% Similarity=0.257 Sum_probs=35.1
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
-.+.|+|.+.+..-|.. |+ -...+|.++||+|..+|.+|.+++-.
T Consensus 218 l~~tvvV~atsd~~~~~----r~----~ap~~a~aiAEyfrd~G~~VLlv~Dd 262 (502)
T PRK13343 218 LEYTTVVVAEASDPPGL----QY----LAPFAGCAIAEYFRDQGQDALIVYDD 262 (502)
T ss_pred cceeEEEEecccccHHH----HH----HHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 34678888777766665 33 35678999999999999999999854
No 481
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=45.98 E-value=33 Score=32.61 Aligned_cols=26 Identities=4% Similarity=0.137 Sum_probs=23.9
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|+|-+|.++|-++...|..++++..+
T Consensus 75 s~gN~g~alA~~a~~~Gl~~~iv~~~ 100 (337)
T TIGR01274 75 IQSNQTRQVAAVAAHLGMKCVLVQEN 100 (337)
T ss_pred CcchHHHHHHHHHHHcCCcEEEEecc
Confidence 78999999999999999999988865
No 482
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=45.67 E-value=40 Score=33.91 Aligned_cols=35 Identities=14% Similarity=0.249 Sum_probs=28.2
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
.+.+++++|+++ |.+|.++|..+.+.|++|++..+
T Consensus 329 ~~~~k~vlIiGa-------------------GgiG~aia~~L~~~G~~V~i~~R 363 (477)
T PRK09310 329 PLNNQHVAIVGA-------------------GGAAKAIATTLARAGAELLIFNR 363 (477)
T ss_pred CcCCCEEEEEcC-------------------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 456777877765 56999999999999998887654
No 483
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=45.63 E-value=41 Score=33.01 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=39.2
Q ss_pred CCCcEEEEeCCCcccccCCC----CeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQR----CVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~----~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
..-++++|..|...-+|... .-++++.. -+|..|..+|..+.++|.+|+++.+.....|
T Consensus 129 ~~~d~lIiATGs~~p~ipg~~~~~~~~~~~~~~~~~~~~~~k~v~VIGgG~~g~E~A~~l~~~g~~Vtli~~~~~~l~ 206 (460)
T PRK06292 129 IEAKNIVIATGSRVPPIPGVWLILGDRLLTSDDAFELDKLPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILP 206 (460)
T ss_pred EEeCEEEEeCCCCCCCCCCCcccCCCcEECchHHhCccccCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 45678888888771223210 12333321 1577899999999999999999997655444
No 484
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=45.63 E-value=28 Score=34.92 Aligned_cols=24 Identities=21% Similarity=0.302 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
|-.|+++|..+.++|.+|.+|-..
T Consensus 15 Gi~G~~~A~~la~rG~~V~LlEk~ 38 (502)
T PRK13369 15 GINGAGIARDAAGRGLKVLLCEKD 38 (502)
T ss_pred CHHHHHHHHHHHhCCCcEEEEECC
Confidence 789999999999999999999875
No 485
>PRK04346 tryptophan synthase subunit beta; Validated
Probab=45.60 E-value=28 Score=34.38 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=28.7
Q ss_pred eeEcccchhHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 39 RYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 39 R~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|.|.-.|+|..|.++|-++...|.+++++++..+
T Consensus 108 ~vIaetgaGnhG~A~A~~aa~~Gl~c~I~mp~~d 141 (397)
T PRK04346 108 RIIAETGAGQHGVATATAAALLGLECVIYMGAED 141 (397)
T ss_pred eEEEecCcHHHHHHHHHHHHHcCCcEEEEecCCc
Confidence 4455457999999999999999999999998653
No 486
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=45.46 E-value=28 Score=32.34 Aligned_cols=26 Identities=15% Similarity=0.321 Sum_probs=23.1
Q ss_pred chhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 45 SSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 45 SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
=.|.||..+|..+++.|++|+++..+
T Consensus 11 GaG~mG~~iA~~l~~~g~~V~~~d~~ 36 (311)
T PRK06130 11 GAGTMGSGIAALFARKGLQVVLIDVM 36 (311)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999998753
No 487
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=45.37 E-value=43 Score=29.84 Aligned_cols=36 Identities=25% Similarity=0.186 Sum_probs=29.3
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..|+.|+|++| +|-+|.++++.+..+|+.|+++.+.
T Consensus 143 ~~g~~vlI~g~------------------~~~~g~~~~~~a~~~g~~v~~~~~~ 178 (325)
T cd08253 143 KAGETVLVHGG------------------SGAVGHAAVQLARWAGARVIATASS 178 (325)
T ss_pred CCCCEEEEEcC------------------CchHHHHHHHHHHHcCCEEEEEeCC
Confidence 46788999876 3559999999999999999887653
No 488
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=45.24 E-value=43 Score=33.05 Aligned_cols=59 Identities=19% Similarity=0.107 Sum_probs=39.6
Q ss_pred CCCcEEEEeCCCcccccCCC--CeeeEccc---------------chhHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 022985 17 GTRRVACVTSGGTTVPLEQR--CVRYIDNF---------------SSGHRGAASTEHLIKMGYAVIFLYRRGTCEP 75 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~--~VR~IsN~---------------SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~~P 75 (289)
..-++++|..|++...+.-. +=++++.. -.|..|..+|..+.+.|.+|+++.+.....|
T Consensus 134 ~~~d~lViATGs~p~~~pg~~~~~~v~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 209 (466)
T PRK07818 134 VTFDNAIIATGSSTRLLPGTSLSENVVTYEEQILSRELPKSIVIAGAGAIGMEFAYVLKNYGVDVTIVEFLDRALP 209 (466)
T ss_pred EEcCEEEEeCCCCCCCCCCCCCCCcEEchHHHhccccCCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 34688999888775433200 01223221 2688999999999999999999987655444
No 489
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=45.18 E-value=24 Score=35.83 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=25.4
Q ss_pred eeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 39 RYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 39 R~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+-|.=-=.|.||..||..++..|++|+++-..
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~ 39 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDAR 39 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 33333346999999999999999999988754
No 490
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=45.05 E-value=44 Score=33.93 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=31.7
Q ss_pred CCCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEec
Q 022985 15 YEGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYR 69 (289)
Q Consensus 15 ~~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g 69 (289)
..+.||+|+|.+. |..|..+|+.+..+|+.|+++..
T Consensus 250 ~~LaGKtVgVIG~-------------------G~IGr~vA~rL~a~Ga~ViV~e~ 285 (476)
T PTZ00075 250 VMIAGKTVVVCGY-------------------GDVGKGCAQALRGFGARVVVTEI 285 (476)
T ss_pred CCcCCCEEEEECC-------------------CHHHHHHHHHHHHCCCEEEEEeC
Confidence 4578999999987 77999999999999999988765
No 491
>PRK06475 salicylate hydroxylase; Provisional
Probab=44.96 E-value=31 Score=33.19 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|--|.++|.++.++|++|+++-....
T Consensus 11 GiaGl~~A~~L~~~G~~V~i~E~~~~ 36 (400)
T PRK06475 11 GVAGLSAALELAARGWAVTIIEKAQE 36 (400)
T ss_pred CHHHHHHHHHHHhCCCcEEEEecCCc
Confidence 55799999999999999999997643
No 492
>TIGR00962 atpA proton translocating ATP synthase, F1 alpha subunit. The sequences of ATP synthase F1 alpha and beta subunits are related and both contain a nucleotide-binding site for ATP and ADP. They have a common amino terminal domain but vary at the C-terminus. The beta chain has catalytic activity, while the alpha chain is a regulatory subunit. The alpha-subunit contains a highly conserved adenine-specific noncatalytic nucleotide-binding domain. The conserved amino acid sequence is Gly-X-X-X-X-Gly-Lys. Proton translocating ATP synthase F1, alpha subunit is homologous to proton translocating ATP synthase archaeal/vacuolar(V1), B subunit.
Probab=44.91 E-value=35 Score=34.76 Aligned_cols=45 Identities=13% Similarity=0.187 Sum_probs=33.8
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
-.+.|+|.+-+..-|.. |+ -+..+|.++||+|..+|.+|.+++-+
T Consensus 217 l~~tvvV~atsd~p~~~----r~----~a~~~a~aiAEyfrd~G~~VLlv~Dd 261 (501)
T TIGR00962 217 MDYTIVVAATASDSASL----QY----LAPYTGCTMAEYFRDNGKHALIIYDD 261 (501)
T ss_pred cceeEEEEecCCCCHHH----HH----HHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 34567777666555544 33 35679999999999999999999865
No 493
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=44.75 E-value=53 Score=29.46 Aligned_cols=40 Identities=15% Similarity=0.022 Sum_probs=34.1
Q ss_pred CCCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecCCCC
Q 022985 16 EGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTC 73 (289)
Q Consensus 16 ~~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~~s~ 73 (289)
++.||+|+|-+. |..-|.-+|..+.++||.|+.++.++..
T Consensus 59 ~l~GK~vvVIGr------------------S~iVGkPla~lL~~~~AtVti~~~~~~~ 98 (197)
T cd01079 59 RLYGKTITIINR------------------SEVVGRPLAALLANDGARVYSVDINGIQ 98 (197)
T ss_pred CCCCCEEEEECC------------------CccchHHHHHHHHHCCCEEEEEecCccc
Confidence 689999999876 5668999999999999999999866543
No 494
>PRK05868 hypothetical protein; Validated
Probab=44.74 E-value=32 Score=32.91 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHCCCeEEEEecCCC
Q 022985 47 GHRGAASTEHLIKMGYAVIFLYRRGT 72 (289)
Q Consensus 47 G~~G~~iAe~~~~~Ga~V~~i~g~~s 72 (289)
|--|.++|..+.++|++|+++=....
T Consensus 10 G~aGl~~A~~L~~~G~~v~viE~~~~ 35 (372)
T PRK05868 10 SVAGTAAAYWLGRHGYSVTMVERHPG 35 (372)
T ss_pred CHHHHHHHHHHHhCCCCEEEEcCCCC
Confidence 56799999999999999999987543
No 495
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=44.68 E-value=47 Score=30.66 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=33.7
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
+...+|+|.+|||..|-= ||-...+..|++ .+++|++.+.+
T Consensus 122 l~~grVvIf~gGtg~P~f----------TTDt~AALrA~e---i~ad~ll~atn 162 (238)
T COG0528 122 LEKGRVVIFGGGTGNPGF----------TTDTAAALRAEE---IEADVLLKATN 162 (238)
T ss_pred HHcCCEEEEeCCCCCCCC----------chHHHHHHHHHH---hCCcEEEEecc
Confidence 445699999999999987 888777777776 69999999875
No 496
>PRK09281 F0F1 ATP synthase subunit alpha; Validated
Probab=44.63 E-value=37 Score=34.66 Aligned_cols=45 Identities=16% Similarity=0.215 Sum_probs=35.7
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
-.+.|+|.+-+..-|+. |+ -+..+|.++||+|...|.+|.++.-.
T Consensus 218 l~~tvvv~atsd~p~~~----r~----~a~~~a~tiAEyfrd~G~~VLli~Dd 262 (502)
T PRK09281 218 MEYTIVVAATASDPAPL----QY----LAPYAGCAMGEYFMDNGKDALIVYDD 262 (502)
T ss_pred ccceEEEEeCCCCCHHH----HH----HHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 34678887777666665 33 46789999999999999999999855
No 497
>PRK04196 V-type ATP synthase subunit B; Provisional
Probab=44.35 E-value=41 Score=33.91 Aligned_cols=45 Identities=16% Similarity=0.196 Sum_probs=33.8
Q ss_pred CCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHH-HCCCeEEEEecC
Q 022985 18 TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLI-KMGYAVIFLYRR 70 (289)
Q Consensus 18 ~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~-~~Ga~V~~i~g~ 70 (289)
-.+.|+|-+-+..-|+. | ..+..+|.++||+|. .+|.+|.+++-+
T Consensus 203 l~rtvvV~atsd~p~~~----R----~~a~~~a~tiAEyfr~d~G~~VLli~Ds 248 (460)
T PRK04196 203 LERSVVFLNLADDPAIE----R----ILTPRMALTAAEYLAFEKGMHVLVILTD 248 (460)
T ss_pred cceEEEEEEcCCCCHHH----H----HHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 34566766665555555 2 347889999999999 799999999964
No 498
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=44.16 E-value=45 Score=30.72 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=28.8
Q ss_pred CCCcEEEEeCCCcccccCCCCeeeEcccchhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 17 GTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 17 ~~~k~VLITaGgT~e~ID~~~VR~IsN~SSG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
..|.+|||++| +|-.|.+.++.+..+|+.|+.+.+.
T Consensus 137 ~~g~~VLI~ga------------------~g~vG~~aiqlAk~~G~~Vi~~~~s 172 (325)
T TIGR02825 137 KGGETVMVNAA------------------AGAVGSVVGQIAKLKGCKVVGAAGS 172 (325)
T ss_pred CCCCEEEEeCC------------------ccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999876 3568888888888899999877754
No 499
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria.
Probab=44.06 E-value=47 Score=32.64 Aligned_cols=29 Identities=17% Similarity=0.172 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRRGTCE 74 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~~s~~ 74 (289)
.|-.|..+|..+...|.+|+++.+.....
T Consensus 174 gG~~g~E~A~~l~~~G~~Vtli~~~~~~l 202 (446)
T TIGR01424 174 GGYIAVEFAGIWRGLGVQVTLIYRGELIL 202 (446)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 68899999999999999999999765443
No 500
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=44.05 E-value=31 Score=35.89 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHHCCCeEEEEecC
Q 022985 46 SGHRGAASTEHLIKMGYAVIFLYRR 70 (289)
Q Consensus 46 SG~~G~~iAe~~~~~Ga~V~~i~g~ 70 (289)
.|-+|.++|-++.++|++|+++-+.
T Consensus 268 aGIaG~s~A~~La~~G~~V~VlE~~ 292 (662)
T PRK01747 268 GGIAGAALALALARRGWQVTLYEAD 292 (662)
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecC
Confidence 4899999999999999999999764
Done!