Query 022988
Match_columns 289
No_of_seqs 263 out of 1948
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:28:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zs7_A Pyridoxal kinase; trans 100.0 2.3E-46 8E-51 336.5 25.5 269 14-288 3-299 (300)
2 3pzs_A PM kinase, pyridoxamine 100.0 4.7E-45 1.6E-49 326.5 27.3 265 12-287 2-288 (289)
3 2yxt_A Pyridoxal kinase; beta 100.0 5.5E-37 1.9E-41 276.8 30.0 277 12-288 2-312 (312)
4 3mbh_A Putative phosphomethylp 100.0 5.7E-38 1.9E-42 280.8 23.2 233 13-251 6-261 (291)
5 3h74_A Pyridoxal kinase; PSI-I 100.0 2.5E-37 8.5E-42 275.4 23.3 232 13-252 2-252 (282)
6 2ddm_A Pyridoxine kinase; pyri 100.0 3.5E-33 1.2E-37 248.4 27.4 237 14-252 15-270 (283)
7 3rm5_A Hydroxymethylpyrimidine 100.0 7.1E-34 2.4E-38 274.5 23.4 255 2-264 10-295 (550)
8 2i5b_A Phosphomethylpyrimidine 100.0 1.6E-30 5.5E-35 229.7 23.9 242 13-262 2-263 (271)
9 1ub0_A THID, phosphomethylpyri 100.0 2.8E-30 9.6E-35 226.5 22.6 233 14-257 1-252 (258)
10 1jxh_A Phosphomethylpyrimidine 100.0 3.4E-29 1.2E-33 223.5 24.5 232 8-250 19-270 (288)
11 3lhx_A Ketodeoxygluconokinase; 99.9 1.3E-24 4.4E-29 196.2 13.5 205 25-247 52-298 (319)
12 3umo_A 6-phosphofructokinase i 99.9 1.9E-23 6.3E-28 187.6 19.4 202 26-247 58-288 (309)
13 3ktn_A Carbohydrate kinase, PF 99.9 3.3E-24 1.1E-28 195.5 14.0 208 25-247 53-312 (346)
14 4du5_A PFKB; structural genomi 99.9 2.7E-24 9.1E-29 195.7 13.1 204 26-249 78-319 (336)
15 1rkd_A Ribokinase; carbohydrat 99.9 6.3E-24 2.1E-28 190.7 14.3 199 25-248 60-288 (309)
16 3ry7_A Ribokinase; transferase 99.9 5E-24 1.7E-28 190.7 13.4 197 25-246 59-286 (304)
17 4e69_A 2-dehydro-3-deoxyglucon 99.9 8.9E-24 3E-28 191.6 15.1 203 25-247 71-311 (328)
18 2fv7_A Ribokinase; structural 99.9 1.8E-23 6.1E-28 189.8 16.7 200 25-248 80-313 (331)
19 2abq_A Fructose 1-phosphate ki 99.9 6.3E-23 2.2E-27 183.9 20.1 204 26-249 56-283 (306)
20 3iq0_A Putative ribokinase II; 99.9 2.9E-24 9.8E-29 194.9 9.9 202 26-247 57-292 (330)
21 3kzh_A Probable sugar kinase; 99.9 2.3E-23 7.9E-28 188.7 15.4 197 25-247 61-289 (328)
22 3cqd_A 6-phosphofructokinase i 99.9 6E-23 2E-27 184.3 17.9 205 26-249 58-290 (309)
23 2qcv_A Putative 5-dehydro-2-de 99.9 1.2E-23 4E-28 190.7 12.2 208 26-249 64-307 (332)
24 2jg5_A Fructose 1-phosphate ki 99.9 1.1E-22 3.7E-27 182.2 17.1 202 26-247 56-281 (306)
25 2afb_A 2-keto-3-deoxygluconate 99.9 7.3E-23 2.5E-27 187.0 15.7 208 25-247 63-324 (351)
26 2jg1_A Tagatose-6-phosphate ki 99.9 7E-23 2.4E-27 185.8 15.3 204 26-248 76-307 (330)
27 3vas_A Putative adenosine kina 99.9 1.7E-23 5.9E-28 192.8 10.9 208 25-248 103-353 (370)
28 2f02_A Tagatose-6-phosphate ki 99.9 9.3E-23 3.2E-27 184.4 14.8 203 26-248 58-290 (323)
29 3ljs_A Fructokinase; fructokia 99.9 4.2E-24 1.4E-28 194.3 5.8 207 25-249 55-310 (338)
30 3pl2_A Sugar kinase, ribokinas 99.9 8.2E-23 2.8E-27 184.2 13.9 203 25-247 60-297 (319)
31 3otx_A Adenosine kinase, putat 99.9 2.4E-23 8E-28 190.0 9.6 208 25-249 88-335 (347)
32 3loo_A Anopheles gambiae adeno 99.9 4.9E-23 1.7E-27 189.4 11.6 208 25-249 102-351 (365)
33 4e84_A D-beta-D-heptose 7-phos 99.9 1.7E-22 5.8E-27 185.0 15.1 125 103-247 202-338 (352)
34 2qhp_A Fructokinase; NP_810670 99.9 1.4E-22 4.7E-27 180.7 12.0 150 87-247 115-279 (296)
35 3ie7_A LIN2199 protein; phosph 99.9 3.8E-22 1.3E-26 179.9 14.7 198 26-247 59-285 (320)
36 3uq6_A Adenosine kinase, putat 99.9 2.1E-22 7.1E-27 185.7 13.1 209 25-249 105-356 (372)
37 3hj6_A Fructokinase, FRK; fruc 99.9 9.1E-24 3.1E-28 191.3 2.7 205 25-249 73-309 (327)
38 3h49_A Ribokinase; transferase 99.9 2.8E-22 9.7E-27 181.3 12.1 199 25-247 62-294 (325)
39 1v1a_A 2-keto-3-deoxygluconate 99.9 2.4E-22 8.4E-27 180.3 10.7 197 25-248 52-284 (309)
40 4e3a_A Sugar kinase protein; s 99.9 1.6E-22 5.6E-27 185.1 9.5 200 25-247 99-332 (352)
41 2nwh_A AGR_C_3442P, carbohydra 99.9 4.1E-22 1.4E-26 179.7 11.9 197 25-248 58-288 (317)
42 1bx4_A Protein (adenosine kina 99.9 1.7E-22 5.9E-27 184.0 9.4 205 25-247 86-332 (345)
43 2v78_A Fructokinase; transfera 99.9 4.1E-22 1.4E-26 179.2 10.0 200 25-248 52-291 (313)
44 1tyy_A Putative sugar kinase; 99.9 2.6E-22 8.8E-27 182.8 7.8 150 87-248 142-310 (339)
45 2dcn_A Hypothetical fructokina 99.9 6.1E-22 2.1E-26 177.8 8.6 199 25-248 52-289 (311)
46 2ajr_A Sugar kinase, PFKB fami 99.9 4E-21 1.4E-25 174.3 13.5 203 25-247 70-306 (331)
47 2rbc_A Sugar kinase, AGR_C_456 99.8 3.5E-21 1.2E-25 175.7 11.5 191 25-248 85-309 (343)
48 1vm7_A Ribokinase; TM0960, str 99.8 2.1E-21 7.2E-26 174.6 9.1 122 111-248 159-291 (311)
49 2abs_A Adenosine kinase, AK; r 99.8 2.9E-21 1E-25 178.6 9.7 204 25-248 110-371 (383)
50 4gm6_A PFKB family carbohydrat 99.8 1.8E-21 6.3E-26 177.6 7.0 147 97-251 164-327 (351)
51 3ikh_A Carbohydrate kinase; tr 99.8 7E-21 2.4E-25 170.3 8.3 180 25-248 58-269 (299)
52 3ewm_A Uncharacterized sugar k 99.8 2.2E-20 7.6E-25 167.9 9.9 194 25-246 52-280 (313)
53 2c4e_A Sugar kinase MJ0406; tr 99.8 4.4E-20 1.5E-24 165.2 8.1 195 25-248 61-280 (302)
54 2pkf_A Adenosine kinase; trans 99.8 1.4E-19 4.9E-24 164.3 10.5 194 25-248 76-300 (334)
55 1vk4_A PFKB carbohydrate kinas 99.8 1.8E-19 6E-24 161.1 6.5 199 25-248 55-280 (298)
56 3kd6_A Carbohydrate kinase, PF 99.8 8.2E-19 2.8E-23 157.8 9.7 142 86-248 119-277 (313)
57 2hlz_A Ketohexokinase; non-pro 99.8 1.1E-17 3.9E-22 150.3 14.4 192 25-247 73-304 (312)
58 3go6_A Ribokinase RBSK; phosph 99.8 4.9E-19 1.7E-23 159.2 5.5 182 25-247 75-284 (310)
59 2r3b_A YJEF-related protein; p 99.7 4.3E-17 1.5E-21 146.3 16.6 206 13-248 43-267 (310)
60 1ekq_A Hydroxyethylthiazole ki 99.7 8.8E-17 3E-21 142.0 16.6 149 90-251 64-234 (272)
61 3b1n_A Ribokinase, putative; r 99.7 1.6E-17 5.4E-22 150.3 10.2 138 87-247 136-285 (326)
62 3bgk_A SMU.573, putative uncha 99.7 1.4E-16 4.7E-21 143.0 15.7 209 13-248 57-284 (311)
63 1v8a_A Hydroxyethylthiazole ki 99.6 9.5E-15 3.3E-19 128.4 13.5 155 87-251 57-230 (265)
64 3dzv_A 4-methyl-5-(beta-hydrox 99.6 4.9E-14 1.7E-18 123.8 15.9 154 89-251 63-239 (273)
65 3bf5_A Ribokinase related prot 99.6 3.1E-15 1.1E-19 134.1 6.3 182 26-248 76-279 (306)
66 3rss_A Putative uncharacterize 99.5 3.3E-13 1.1E-17 128.3 15.3 206 13-241 243-469 (502)
67 3rpz_A ADP/ATP-dependent NAD(P 99.4 7.2E-13 2.5E-17 116.9 11.9 207 13-246 29-249 (279)
68 3hpd_A Hydroxyethylthiazole ki 99.3 2.8E-11 9.6E-16 105.6 13.2 152 90-251 62-230 (265)
69 3nl6_A Thiamine biosynthetic b 99.3 2.8E-11 9.5E-16 115.9 14.2 150 90-251 312-505 (540)
70 3k5w_A Carbohydrate kinase; 11 98.9 5E-09 1.7E-13 98.8 9.5 133 86-239 292-439 (475)
71 3drw_A ADP-specific phosphofru 84.3 3.6 0.00012 38.3 8.6 110 70-191 224-356 (474)
72 1gc5_A ADP-dependent glucokina 73.3 18 0.00062 33.5 9.6 112 70-192 221-352 (467)
73 1zco_A 2-dehydro-3-deoxyphosph 69.6 43 0.0015 28.3 10.5 107 69-193 36-165 (262)
74 1l2l_A ADP-dependent glucokina 67.6 77 0.0026 29.2 13.6 110 70-192 216-345 (457)
75 1ua4_A Glucokinase, ADP-depend 65.4 34 0.0012 31.5 9.6 98 87-193 226-343 (455)
76 1vs1_A 3-deoxy-7-phosphoheptul 58.1 78 0.0027 27.0 10.0 77 102-193 89-180 (276)
77 3iwp_A Copper homeostasis prot 57.7 79 0.0027 27.2 9.9 58 66-127 104-163 (287)
78 3nvt_A 3-deoxy-D-arabino-heptu 56.1 1.1E+02 0.0039 27.3 12.1 108 68-193 154-284 (385)
79 1vr6_A Phospho-2-dehydro-3-deo 55.6 86 0.003 27.7 10.1 107 68-192 118-247 (350)
80 1vli_A Spore coat polysacchari 52.5 1E+02 0.0035 27.7 10.1 80 101-194 100-193 (385)
81 3drw_A ADP-specific phosphofru 41.5 13 0.00043 34.6 2.4 23 204-226 445-468 (474)
82 1gc5_A ADP-dependent glucokina 40.9 13 0.00045 34.5 2.4 22 205-226 442-464 (467)
83 2wqp_A Polysialic acid capsule 39.9 2E+02 0.0067 25.4 11.4 78 100-191 89-180 (349)
84 1y7p_A Hypothetical protein AF 39.2 49 0.0017 27.4 5.3 109 15-164 88-201 (223)
85 1ua4_A Glucokinase, ADP-depend 38.7 15 0.00051 34.0 2.4 22 205-226 431-453 (455)
86 1l2l_A ADP-dependent glucokina 37.8 14 0.00047 34.2 2.0 21 205-225 434-455 (457)
87 3g8r_A Probable spore coat pol 37.3 1.4E+02 0.0047 26.4 8.4 77 101-191 77-167 (350)
88 1ztd_A Hypothetical protein PF 37.2 33 0.0011 25.1 3.5 31 206-237 63-94 (133)
89 1to3_A Putative aldolase YIHT; 35.9 1.7E+02 0.0057 25.1 8.7 88 99-195 139-231 (304)
90 3cra_A Protein MAZG; tandem-re 34.0 1.2E+02 0.004 25.8 7.1 56 211-267 195-251 (265)
91 4eys_A MCCC family protein; MC 31.1 81 0.0028 27.8 5.9 58 68-127 259-317 (346)
92 3dhn_A NAD-dependent epimerase 30.7 1.1E+02 0.0037 24.1 6.3 91 12-114 2-102 (227)
93 3iix_A Biotin synthetase, puta 27.3 2.9E+02 0.0099 23.5 12.5 109 66-187 83-193 (348)
94 1qwg_A PSL synthase;, (2R)-pho 25.8 1.4E+02 0.0048 25.1 6.1 61 56-122 12-73 (251)
95 3vk5_A MOEO5; TIM barrel, tran 25.5 1.3E+02 0.0045 25.8 5.9 50 69-124 52-104 (286)
96 2guz_B Mitochondrial import in 25.3 77 0.0026 20.6 3.5 31 156-186 2-36 (65)
97 1u83_A Phosphosulfolactate syn 24.8 96 0.0033 26.5 4.9 61 56-123 39-99 (276)
98 3rzi_A Probable 3-deoxy-D-arab 24.5 2.2E+02 0.0074 26.1 7.4 61 64-125 308-368 (462)
99 2i2x_B MTAC, methyltransferase 24.3 3E+02 0.01 22.7 9.4 117 13-164 122-238 (258)
100 2fcj_A Small toprim domain pro 24.1 1.4E+02 0.0047 22.0 5.1 66 101-180 38-103 (119)
101 2bdq_A Copper homeostasis prot 23.8 90 0.0031 25.8 4.5 55 67-125 70-126 (224)
102 2fds_A Orotidine-monophosphate 22.6 3.8E+02 0.013 23.6 8.6 40 87-128 119-162 (352)
103 2q5c_A NTRC family transcripti 22.1 75 0.0026 25.4 3.7 37 154-190 106-147 (196)
104 3pzt_A Endoglucanase; alpha/be 21.7 1.6E+02 0.0055 25.3 6.1 54 65-126 67-127 (327)
105 3eww_A Ompdecase, orotidine-5' 21.7 1.9E+02 0.0064 24.3 6.2 55 68-128 42-97 (260)
106 4gqr_A Pancreatic alpha-amylas 21.3 55 0.0019 29.5 3.0 25 101-127 76-100 (496)
107 3sz8_A 2-dehydro-3-deoxyphosph 21.2 3.7E+02 0.013 22.8 8.1 70 109-193 85-169 (285)
108 3l52_A Orotidine 5'-phosphate 20.6 3.9E+02 0.013 22.7 10.8 63 87-157 63-134 (284)
109 1twd_A Copper homeostasis prot 20.6 1.2E+02 0.0041 25.6 4.7 56 67-126 67-124 (256)
110 3k1y_A Oxidoreductase; structu 20.2 1.8E+02 0.0062 22.9 5.6 93 11-112 8-112 (191)
No 1
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=100.00 E-value=2.3e-46 Score=336.48 Aligned_cols=269 Identities=38% Similarity=0.652 Sum_probs=225.1
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCCc-ccCEEEE
Q 022988 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLT 92 (289)
Q Consensus 14 ~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~-~~~~v~~ 92 (289)
.++||+|+|++++|++|+.+++++|+.+|+++..++|+.++|||||..+.|..++.++++.++++|....++ .+|+|++
T Consensus 3 ~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~Snhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~daV~t 82 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYRYILT 82 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCSEEEE
T ss_pred CCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEecCCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 478999999999999999999999999999999999999999999988888999999999999999876542 4899999
Q ss_pred eecCCHhHHHHHHHHHHHHHhcCCC----ceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCC
Q 022988 93 GYIGSVSFLNTILQVVEKLRSINPN----LIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (289)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~----~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~ 168 (289)
|++++.+..+.+.++++.+|+++|+ .++||||+++++|++|.+++.++.+++ +++++|+|+||+.|++.|+|.++
T Consensus 83 G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~g~~~ 161 (300)
T 3zs7_A 83 GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLSGVTV 161 (300)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHH-HGGGCSEECCCHHHHHHHHSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHhCCCC
Confidence 9999999999999999999876333 789999999988889988999999998 99999999999999999999998
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEeeeecCC-------cEEEec------c----------cCCCCCchHHHHHHHHHHHc
Q 022988 169 GSEADGREACKILHAAGPAKVVITSINIDG-------NLFLIG------S----------HQKEKGTGDLMTALLLGWSN 225 (289)
Q Consensus 169 ~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G-------~~~~~~------~----------~~dt~GAGD~f~g~l~~~l~ 225 (289)
.+.+++.+++++|+++|++.|+||+|+ .| .++... . +.+++||||+|+|+|+++|
T Consensus 162 ~~~~~~~~aa~~L~~~G~~~Vvvt~g~-~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~GtGD~fsaal~a~l- 239 (300)
T 3zs7_A 162 NDLSSAILAADWFHNCGVAHVIIKSFR-EQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEGRYTGTGDVFAACLLAFS- 239 (300)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEEEEC----CCSEEEEEEEECCSTTSCCEEEEEEEECCSSCBTTHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCc-CCCCCceEEEEEeccccccCCCeEEEEEeccCCCCCcCHHHHHHHHHHHHH-
Confidence 888999999999999999999999997 55 222222 1 1578999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCccccccccccccccCCccceeeeec
Q 022988 226 KYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEKY 288 (289)
Q Consensus 226 ~~g~~~~~A~~~A~a~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (289)
+ |.++++|+++|+++++.+++++.+.+ +.|-.+. ...||++|++|+.+++|++.|+++|.
T Consensus 240 ~-g~~~~~Av~~A~~~v~~~i~~t~~~~-~~g~~~~-~~~el~lv~~~~~~~~p~~~~~~~~~ 299 (300)
T 3zs7_A 240 H-SHPMDVAIGKSMAVLQELIIATRKEG-GDGKSSL-KSRELRVVASPQVVLQPSTVVDVKPI 299 (300)
T ss_dssp T-TSCHHHHHHHHHHHHHHHHHHTTC------------CBCCCSTTCHHHHHSCCSCCCCEEC
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCc-cccchHHHhhHHHHhCCCcceEEEEC
Confidence 8 99999999999999999999997632 2232232 35699999999999999999999874
No 2
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=100.00 E-value=4.7e-45 Score=326.52 Aligned_cols=265 Identities=32% Similarity=0.544 Sum_probs=233.8
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCC-cccCEE
Q 022988 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNL-LYYTHL 90 (289)
Q Consensus 12 ~~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~-~~~~~v 90 (289)
+.|++||+|+|++.+|++|+.+++.+++.+|+++..+++..+++|||+..+.|..+++++++.+++.+.+... ..+|+|
T Consensus 2 ~~m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~d~v 81 (289)
T 3pzs_A 2 NAMKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAV 81 (289)
T ss_dssp ---CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCGGGSCCCEEECCHHHHHHHHHHHHHTTCGGGCCEE
T ss_pred CCCCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCCCCCCcccccCCHHHHHHHHHHHHhcCCccCCCEE
Confidence 3689999999999999999999999999999999999999888999987777889999999999999977542 258899
Q ss_pred EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCC-ccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCC
Q 022988 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (289)
Q Consensus 91 ~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~-~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~ 169 (289)
++|++++....+.+.++++.+|+++|+++++|||++++.+. .+.+++..+.+++.+++++|+|+||+.|++.|+|.++.
T Consensus 82 ~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~ 161 (289)
T 3pzs_A 82 LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSGERVE 161 (289)
T ss_dssp EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCC
Confidence 99999999999999999999998756689999999997553 44678888888877899999999999999999999888
Q ss_pred CHHHHHHHHHHHHhcCCCeEEEeeeecCCc-------EEEecc-----------c--CCCCCchHHHHHHHHHHHccCCC
Q 022988 170 SEADGREACKILHAAGPAKVVITSINIDGN-------LFLIGS-----------H--QKEKGTGDLMTALLLGWSNKYRD 229 (289)
Q Consensus 170 ~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~-------~~~~~~-----------~--~dt~GAGD~f~g~l~~~l~~~g~ 229 (289)
+.+++.+++++|+++|++.|++|+++.+|+ ++..++ . +|++||||+|+|+|++++++ |.
T Consensus 162 ~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~~~l~~-g~ 240 (289)
T 3pzs_A 162 NVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGLLLVNLLK-GE 240 (289)
T ss_dssp SHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHHHHHHHHT-TC
T ss_pred CHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHHHHHHHHC-CC
Confidence 888999999999999999999998644564 443321 1 57999999999999999998 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCccccccccccccccCCccceeeee
Q 022988 230 NLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 287 (289)
Q Consensus 230 ~~~~A~~~A~a~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (289)
++++|+++|+++++.+++++.+. +..||+++++++.+.+|+..|+++|
T Consensus 241 ~~~~A~~~A~~~~~~~i~~t~~~----------g~~el~li~~~~~~~~p~~~~~~~~ 288 (289)
T 3pzs_A 241 PLDKALEHVTAAVYEVMLKTQEM----------GEYELQVVAAQETIVTPICQFTAVR 288 (289)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT----------TCSSCCTTTTHHHHHSCSSCCCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc----------CCcccccccChHHHhCCCcceeeee
Confidence 99999999999999999999883 4899999999999999999999987
No 3
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=100.00 E-value=5.5e-37 Score=276.76 Aligned_cols=277 Identities=48% Similarity=0.833 Sum_probs=223.4
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 022988 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (289)
Q Consensus 12 ~~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~ 91 (289)
..+++||+|++++++|++|+|.....|+++||+++++.++.++++|++..+.|..+++++++.+++.+....+-.+++++
T Consensus 2 ~~~~~vl~i~~~~~~g~vG~D~g~~iL~~~GV~~~~v~~~~~~~~t~~~~~~g~~l~~~~i~~~~~~~~~~~~~~~~~v~ 81 (312)
T 2yxt_A 2 EEECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVL 81 (312)
T ss_dssp -CCCEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCCCSEEE
T ss_pred CCCCeEEEEecccCCCccchHhhHHHHHHcCCeEEEEEEEEecCCCCcCCccCccCCHHHHHHHHHHHHhcCCccCCEEE
Confidence 45689999999999999999973333899999999988764456777655567889999998887777653222477889
Q ss_pred EeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccC----CCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCC
Q 022988 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE----GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (289)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~----g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~ 167 (289)
+|+++++...+.+.++++.+|++.+.+++++||++++. |.+|..++..+.+++.+++++|+++||++|++.|+|.+
T Consensus 82 ~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~ 161 (312)
T 2yxt_A 82 TGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRK 161 (312)
T ss_dssp ECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHHHHHHSCC
T ss_pred ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHHHHHhCCC
Confidence 99998877788888999999987333458999999854 66776666667776558999999999999999999988
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEeeeec-----CCcEEE-------ec------c---------cCCCCCchHHHHHHH
Q 022988 168 IGSEADGREACKILHAAGPAKVVITSINI-----DGNLFL-------IG------S---------HQKEKGTGDLMTALL 220 (289)
Q Consensus 168 ~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~-----~G~~~~-------~~------~---------~~dt~GAGD~f~g~l 220 (289)
..+.+++.+++++|+++|++.|+||+|+. +|++++ .. . .+||+||||+|+|+|
T Consensus 162 ~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdttGAGDaf~a~~ 241 (312)
T 2yxt_A 162 IHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAML 241 (312)
T ss_dssp CCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSSCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCCCCCCchHHHHHHH
Confidence 77778899999999999999999998862 145543 21 1 148999999999999
Q ss_pred HHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhh---hhcCCCCCCCccccccccccccccCCccceeeeec
Q 022988 221 LGWSNKYRDNLDIAAELAVSSLQALLQRTVNDY---VTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEKY 288 (289)
Q Consensus 221 ~~~l~~~g~~~~~A~~~A~a~a~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (289)
+++|++.|+++++|+++|+++++.+++++.+.+ .+.|..|.....||+|+++++.+.+|+..|+++++
T Consensus 242 ~~~l~~~g~~l~~a~~~A~a~a~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~ 312 (312)
T 2yxt_A 242 LAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIEDPEIVVQATVL 312 (312)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCTTTTSCCCGGGHHHHHSCCCCCCCEEC
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhcccccccCCCccccchhhhhhhCHHHHhCCCcceeeccC
Confidence 999984279999999999999999999998754 34466666667899999999999999999998763
No 4
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=100.00 E-value=5.7e-38 Score=280.82 Aligned_cols=233 Identities=25% Similarity=0.401 Sum_probs=201.4
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEEE
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~~ 92 (289)
+|++||+|+|++.+|++|+.+++++++.+|+.+..++|...+++||+..+.+..++ ++++.+++.|.+.+. .+++|++
T Consensus 6 ~m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~tg~~~~~~~~~~-~~~~~~~~~~~~~d~-~~~aik~ 83 (291)
T 3mbh_A 6 KVKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHTQYPGFSFLDLT-DEMPKIIAEWKKLEV-QFDAIYT 83 (291)
T ss_dssp CCCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECTTSSCCCEEECT-TTHHHHHHHHHHTTC-CCSEEEE
T ss_pred ccCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCCCCCCeeecCcH-HHHHHHHHHHHhcCC-ccCEEEE
Confidence 47999999999999999999999999999999999888766666688777666666 789999988886654 6899999
Q ss_pred eecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcc--CChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCC-
Q 022988 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG- 169 (289)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~--~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~- 169 (289)
|++++.+..+.+.++++.+++. ++++||||++++.|++| .+++.++.+++ +++++|+|+||+.|++.|+|.++.
T Consensus 84 G~l~s~~~i~~v~~~l~~~~~~--~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~-ll~~adiitpN~~Ea~~L~g~~~~~ 160 (291)
T 3mbh_A 84 GYLGSPRQIQIVSDFIKDFRQP--DSLIVADPVLGDNGRLYTNFDMEMVKEMRH-LITKADVITPNLTELFYLLDEPYKA 160 (291)
T ss_dssp CCCSSTTHHHHHHHHHHHHCCT--TCEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCBHHHHHHHHTCCCCS
T ss_pred CCCCCHHHHHHHHHHHHHhcCC--CCcEEECceeeeCCCCCCCCCHHHHHHHHH-HhccCCEEeCCHHHHHHHhCCCCCC
Confidence 9999988999999999988754 88999999999877666 47888888875 999999999999999999998764
Q ss_pred --CHHHHHHHHHHHHhcCCCeEEEeeeec------CCcEEEec--c----------cCCCCCchHHHHHHHHHHHccCCC
Q 022988 170 --SEADGREACKILHAAGPAKVVITSINI------DGNLFLIG--S----------HQKEKGTGDLMTALLLGWSNKYRD 229 (289)
Q Consensus 170 --~~~~~~~a~~~L~~~g~~~Vvvt~g~~------~G~~~~~~--~----------~~dt~GAGD~f~g~l~~~l~~~g~ 229 (289)
+.+++++++++|+++|++.|+||+|+. .|.+++.+ . .+|++||||+|+|+|+++|++ |.
T Consensus 161 ~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~aai~a~l~~-g~ 239 (291)
T 3mbh_A 161 DSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLPAHYPGTGDTFTSVITGSLMQ-GD 239 (291)
T ss_dssp CCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCGGGSTTHHHHHHHHHHHHHHT-TC
T ss_pred CCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccCCCCCChHHHHHHHHHHHHHc-CC
Confidence 678899999999999999999998752 24444432 1 168999999999999999998 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH
Q 022988 230 NLDIAAELAVSSLQALLQRTVN 251 (289)
Q Consensus 230 ~~~~A~~~A~a~a~~~l~~~~~ 251 (289)
++++|+++|+++++.+++++.+
T Consensus 240 ~l~~A~~~A~~~~~~ai~~~~~ 261 (291)
T 3mbh_A 240 SLPMALDRATQFILQGIRATFG 261 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998876
No 5
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=100.00 E-value=2.5e-37 Score=275.45 Aligned_cols=232 Identities=27% Similarity=0.352 Sum_probs=197.9
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCC-CCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHT-GYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~t-g~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~ 91 (289)
++++||+|+|++.+|++|+.+++++++.+|+....++|...+++| |+..+.+..++ +++..+++.|...++ .+|+|+
T Consensus 2 ~~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~-~~~~~~~~~~~~~d~-~~daik 79 (282)
T 3h74_A 2 SLSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLS-TWLPQVFAHWTRAQL-HFDQAL 79 (282)
T ss_dssp CCEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCT-TTHHHHHHHHHHTTC-CCSEEE
T ss_pred CCCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecCh-HHHHHHHHHHHHcCC-ccCEEE
Confidence 368999999999999999999999999999999888877655555 88776666666 688888888875553 689999
Q ss_pred EeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCcc--CChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCC
Q 022988 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (289)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~--~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~ 169 (289)
+|++++.+..+.+.+++++. ++.++|||||++++|.+| .+++.++.+++ +++++|+|+||+.|++.|+|.++.
T Consensus 80 ~G~l~s~~~i~~v~~~l~~~----~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~-ll~~adiitpN~~Ea~~L~g~~~~ 154 (282)
T 3h74_A 80 IGYVGSVALCQQITTYLEQQ----TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQ-LIQQADVILPNTTEAALLTGAPYQ 154 (282)
T ss_dssp ECCCCSHHHHHHHHHHHHHS----CCSEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCCHHHHHHHHTCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHC----CCCcEEEcCeeecCCCCCCCCCHHHHHHHHH-HhccCCEECCCHHHHHHHhCCCCC
Confidence 99999988888888887765 378999999999877666 47888888885 999999999999999999999877
Q ss_pred CHHHHHHHHHHHHh-cCC-CeEEEeeee---cCCcEEEe-cc----------cCCCCCchHHHHHHHHHHHccCCCCHHH
Q 022988 170 SEADGREACKILHA-AGP-AKVVITSIN---IDGNLFLI-GS----------HQKEKGTGDLMTALLLGWSNKYRDNLDI 233 (289)
Q Consensus 170 ~~~~~~~a~~~L~~-~g~-~~Vvvt~g~---~~G~~~~~-~~----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~ 233 (289)
+.+++++++++|++ +|+ +.|+||+|+ ..|.+++. ++ ++|++||||+|+|+|+++|++ |.++++
T Consensus 155 ~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~~dt~GaGD~fsaai~a~l~~-g~~l~~ 233 (282)
T 3h74_A 155 VTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLPGHYNGTGDTLAAVIAGLLGR-GYPLAP 233 (282)
T ss_dssp SSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCSSCCTTHHHHHHHHHHHHHHT-TCCHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHHC-CCCHHH
Confidence 77788999999998 999 999999985 13454442 21 268999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 022988 234 AAELAVSSLQALLQRTVND 252 (289)
Q Consensus 234 A~~~A~a~a~~~l~~~~~~ 252 (289)
|+++|+++++.+++++.+.
T Consensus 234 A~~~A~~~~~~ai~~~~~~ 252 (282)
T 3h74_A 234 TLARANQWLNMAVAETIAQ 252 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999875
No 6
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=100.00 E-value=3.5e-33 Score=248.42 Aligned_cols=237 Identities=29% Similarity=0.407 Sum_probs=195.4
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCC-cccCEEEE
Q 022988 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNL-LYYTHLLT 92 (289)
Q Consensus 14 ~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~-~~~~~v~~ 92 (289)
+++||.|++++.+|++|++++...|+++|+++.++++....+++|+..+.|..+++++++.+++.+.+.+. -.++++++
T Consensus 15 ~~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~i~~~~~g~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~v~~ 94 (283)
T 2ddm_A 15 QADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTT 94 (283)
T ss_dssp CCSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCTTCCEEEE
T ss_pred cCeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEEEeccCCCcCceeeeeCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 48999999999999999999888999999999998876544566765556678898898888887765322 13788999
Q ss_pred eecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccC-CCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCH
Q 022988 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE-GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSE 171 (289)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~-g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~ 171 (289)
|+++.....+.+.++++.+|+++++++++|||++++. +.+|..++..+.+.+.+++++|+++||+.|++.|+|.+..+.
T Consensus 95 G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~ 174 (283)
T 2ddm_A 95 GYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDL 174 (283)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSH
T ss_pred CCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCH
Confidence 9988877788899999999872238899999999853 457766665666655588999999999999999999887777
Q ss_pred HHHHHHHHHHHhcCCCeEEEeeeecC-------CcEEEecc----------cCCCCCchHHHHHHHHHHHccCCCCHHHH
Q 022988 172 ADGREACKILHAAGPAKVVITSINID-------GNLFLIGS----------HQKEKGTGDLMTALLLGWSNKYRDNLDIA 234 (289)
Q Consensus 172 ~~~~~a~~~L~~~g~~~Vvvt~g~~~-------G~~~~~~~----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A 234 (289)
++..+++++|.++|++.|++|+|+ + |+++..++ .+||+||||+|+|+|+++|++ |+++++|
T Consensus 175 ~~~~~~a~~l~~~g~~~Vvvt~G~-~~~~~~~~G~~~~~~~~~~~~~~~~v~vdt~GAGDaf~a~~~~~l~~-g~~~~~A 252 (283)
T 2ddm_A 175 DSAIAAAKSLLSDTLKWVVVTSAS-GNEENQEMQVVVVTADSVNVISHSRVKTDLKGTGDLFCAQLISGLLK-GKALTDA 252 (283)
T ss_dssp HHHHHHHHHHCCSSCCEEEEEC--------CEEEEEEEETTEEEEEEEECCCCCCCCHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcccc-CccCCCceeEEEEeCCceEEEeeceeCCCCCChHHHHHHHHHHHHHc-CCCHHHH
Confidence 888899999999999999999997 5 56554432 278999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 022988 235 AELAVSSLQALLQRTVND 252 (289)
Q Consensus 235 ~~~A~a~a~~~l~~~~~~ 252 (289)
+++|+++++.+++++...
T Consensus 253 ~~~A~a~a~~~v~~~~~~ 270 (283)
T 2ddm_A 253 VHRAGLRVLEVMRYTQQH 270 (283)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999775
No 7
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-34 Score=274.46 Aligned_cols=255 Identities=18% Similarity=0.186 Sum_probs=202.8
Q ss_pred CCCeeeccCCCCCCeEEEEeccCccCccchhhcHHHHHhCCCcc-eeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHH
Q 022988 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDV-DPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLE 80 (289)
Q Consensus 2 ~~~~~~~~~~~~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~-~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~ 80 (289)
.||||.++...++|+||+|+|++.+|++|+.+++++|+++|+.. ..++.++.+++.|+..+ ..++++.+..+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~--~~~p~~~v~~ql~~~~ 87 (550)
T 3rm5_A 10 PPPYLTLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSI--NNTPKEVVFQTLESNL 87 (550)
T ss_dssp CCTTGGGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEE--EECCHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceE--EECCHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999877 55555555566554333 5567777777776665
Q ss_pred hCCCcccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccc-cCCCccCChhHHHHHHHhhcCCceEEcCCHHH
Q 022988 81 ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (289)
Q Consensus 81 ~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~-~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E 159 (289)
+. ..+|+|++|++ +.+..+.+.++++..++. +.++|+||+++ ++|..+.+++.++.+++.+++.+|+||||..|
T Consensus 88 ~d--~~~daIkiG~l-s~~~i~~v~~~l~~~~~~--~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~E 162 (550)
T 3rm5_A 88 KD--MKCNVIKTGML-TAAAIEVLHEKLLQLGEN--RPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPE 162 (550)
T ss_dssp HH--BCCSEEEECSC-CHHHHHHHHHHHHHHGGG--SCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHH
T ss_pred hC--CCCCEEEECCC-CHHHHHHHHHHHHHhccc--CCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHH
Confidence 43 25899999999 888999999999988766 77999999997 46666678888888886699999999999999
Q ss_pred HHHhhCCC--CCCHHHHHHHHHHHHhcCC-CeEEEeeeecC--C-----c--EEE--ecc-----------cCCCCCchH
Q 022988 160 AEQLTGFR--IGSEADGREACKILHAAGP-AKVVITSINID--G-----N--LFL--IGS-----------HQKEKGTGD 214 (289)
Q Consensus 160 ~~~L~g~~--~~~~~~~~~a~~~L~~~g~-~~Vvvt~g~~~--G-----~--~~~--~~~-----------~~dt~GAGD 214 (289)
++.|+|.+ +.+.++..+++++|.++|. +.|+||+|+.. | . +++ .++ .++++|+||
T Consensus 163 a~~L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD 242 (550)
T 3rm5_A 163 CYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGC 242 (550)
T ss_dssp HHHHHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHH
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhH
Confidence 99999974 5667889999999998886 89999998621 1 1 233 221 158999999
Q ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhhhh----cCCCCCCCc
Q 022988 215 LMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVT----AGFDPQSSS 264 (289)
Q Consensus 215 ~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~~~~~~~~~----~~~~~~~~~ 264 (289)
+|+|+|++.|++ |.++.+|+++|+++.+.+++++...+.+ .|+.++.-+
T Consensus 243 ~fsaaiaa~La~-G~~l~eAv~~A~~~v~~ai~~~~~~g~g~~~~~gp~~h~~~ 295 (550)
T 3rm5_A 243 TLASAIASNLAR-GYSLPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYA 295 (550)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHCBCCBCTTCCSCCBCCTTTT
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcCchhh
Confidence 999999999999 9999999999999999999999776666 666555433
No 8
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.97 E-value=1.6e-30 Score=229.72 Aligned_cols=242 Identities=21% Similarity=0.210 Sum_probs=185.9
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEe-ecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-SNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~-~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~ 91 (289)
+|++||+|.|++.+|++|..+++..++.+|+....+.+... +++.+........++++.+...++.+.+.. .+++++
T Consensus 2 ~~~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~d~v~ 79 (271)
T 2i5b_A 2 SMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDGI--GVDAMK 79 (271)
T ss_dssp -CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTTTEEEEEECCHHHHHHHHHHHHHHS--CCSEEE
T ss_pred CCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCCceeEEEeCCHHHHHHHHHHHHhCC--CCCEEE
Confidence 57899999999999999999999999999987776665543 233342111224677777766666655321 478999
Q ss_pred EeecCCHhHHHHHHHHHHHHHhcCCCc-eEEEccccccC-CCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCC-C
Q 022988 92 TGYIGSVSFLNTILQVVEKLRSINPNL-IYVCDPVMGDE-GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR-I 168 (289)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~-~vv~Dp~~~~~-g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~-~ 168 (289)
+|++++. +.+..+++.++++ +. +++|||++++. +..+..++..+.+++.+++++|+++||+.|++.|+|.+ .
T Consensus 80 ~G~l~~~---~~~~~~~~~~~~~--~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~~ 154 (271)
T 2i5b_A 80 TGMLPTV---DIIELAAKTIKEK--QLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDEL 154 (271)
T ss_dssp ECCCCSH---HHHHHHHHHHHHT--TCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCCC
T ss_pred ECCCCCH---HHHHHHHHHHHhC--CCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCCC
Confidence 9998774 4556666777766 66 59999999853 33345666666676458899999999999999999987 7
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEeeeec-CCc----EEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHH
Q 022988 169 GSEADGREACKILHAAGPAKVVITSINI-DGN----LFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLD 232 (289)
Q Consensus 169 ~~~~~~~~a~~~L~~~g~~~Vvvt~g~~-~G~----~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~ 232 (289)
.+.++..+++++|.++|++.|++|+|+. +|. +++.++ .+||+||||+|+|+|+++|++ |++++
T Consensus 155 ~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~-g~~~~ 233 (271)
T 2i5b_A 155 KTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK-GAEVK 233 (271)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT-TCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc-CCCHH
Confidence 7778888999999999999999999961 463 443321 158999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCCCC
Q 022988 233 IAAELAVSSLQALLQRTVNDYVTAGFDPQS 262 (289)
Q Consensus 233 ~A~~~A~a~a~~~l~~~~~~~~~~~~~~~~ 262 (289)
+|+++|++++..+++++.+.+++.|+.++.
T Consensus 234 ~A~~~A~~~~~~~~~~~~~~g~g~~~~~~~ 263 (271)
T 2i5b_A 234 EAIYAAKEFITAAIKESFPLNQYVGPTKHS 263 (271)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSSSCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCcCCc
Confidence 999999999999998887766666655443
No 9
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.97 E-value=2.8e-30 Score=226.50 Aligned_cols=233 Identities=24% Similarity=0.284 Sum_probs=171.9
Q ss_pred CCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEe-ecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEEE
Q 022988 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-SNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (289)
Q Consensus 14 ~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~-~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~~ 92 (289)
|++||+|.|++.+|++|..+++..++.+|+....+.+... +++..+.. ...++++.+...++.+.+.. .++++++
T Consensus 1 ~~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~v~~ 76 (258)
T 1ub0_A 1 MRVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQR--VHLLPPEVVYAQIESVAQDF--PLHAAKT 76 (258)
T ss_dssp CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEE--EEECCHHHHHHHHHHHHHHS--CCSEEEE
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeE--EEeCCHHHHHHHHHHHHcCC--CCCEEEE
Confidence 6899999999999999999888899999885555444332 23322211 24567776655444443211 3678999
Q ss_pred eecCCHhHHHHHHHHHHHHHhcCCC-ceEEEcccccc-CCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCC
Q 022988 93 GYIGSVSFLNTILQVVEKLRSINPN-LIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (289)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~-~~vv~Dp~~~~-~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~ 170 (289)
|+++++ +.+..+++.++++ + ++++|||++++ +|..+.+++..+.++..+++++|+++||+.|++.|+|.+..+
T Consensus 77 G~l~~~---~~~~~~~~~~~~~--~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~ 151 (258)
T 1ub0_A 77 GALGDA---AIVEAVAEAVRRF--GVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRT 151 (258)
T ss_dssp CCCCSH---HHHHHHHHHHHHT--TCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCS
T ss_pred CCcCCH---HHHHHHHHHHHhC--CCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCC
Confidence 998854 4455556666665 6 79999999985 443344555555665558899999999999999999988777
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeeeecC-C----cEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHH
Q 022988 171 EADGREACKILHAAGPAKVVITSINID-G----NLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIA 234 (289)
Q Consensus 171 ~~~~~~a~~~L~~~g~~~Vvvt~g~~~-G----~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A 234 (289)
.++..+++++|.++|++.|++|+|+ + | .+++.++ .+||+||||+|+|+|+++|++ |+++++|
T Consensus 152 ~~~~~~~a~~l~~~g~~~vvvt~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~-g~~~~~a 229 (258)
T 1ub0_A 152 LKEAEEAAKALLALGPKAVLLKGGH-LEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK-GRPLAEA 229 (258)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEEE-CC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCC-CCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc-CCCHHHH
Confidence 7888899999999999999999997 6 7 5554432 158999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcC
Q 022988 235 AELAVSSLQALLQRTVNDYVTAG 257 (289)
Q Consensus 235 ~~~A~a~a~~~l~~~~~~~~~~~ 257 (289)
+++|+++++.+++++.+.+.+.|
T Consensus 230 ~~~a~~~~~~~~~~~~~~~~g~~ 252 (258)
T 1ub0_A 230 VAEAKAYLTRALKTAPSLGHGHG 252 (258)
T ss_dssp HHHHHHHHHHHHHTCCCCSSSSC
T ss_pred HHHHHHHHHHHHHHhhccCCCCC
Confidence 99999999999988866544444
No 10
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.97 E-value=3.4e-29 Score=223.47 Aligned_cols=232 Identities=17% Similarity=0.194 Sum_probs=171.8
Q ss_pred ccCCCCCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEe-ecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcc
Q 022988 8 LALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-SNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLY 86 (289)
Q Consensus 8 ~~~~~~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~-~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~ 86 (289)
..++.+|++||++.|+|.+|++|..+++..++..|.....+.+... ++..++.. ...++++.+...++.+.+. +.
T Consensus 19 ~~~~~~~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~--~~~~~~~~~~~~~~~l~~~--~~ 94 (288)
T 1jxh_A 19 QGRHMQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQS--VYRIEPDFVAAQLDSVFSD--VR 94 (288)
T ss_dssp ----CCCCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEE--EEECCHHHHHHHHHHHHTT--SC
T ss_pred CCCCCCCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeee--eeeCCHHHHHHHHHHHHhC--CC
Confidence 4456788999999999999999998888888888876555544432 23322222 2457777766555544432 13
Q ss_pred cCEEEEeecCCHhHHHHHHHHHHHHHhcCCCce-EEEccccc-cCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLI-YVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 87 ~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~-vv~Dp~~~-~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
++++++|++++ .+.+..+++.+++. +.+ ++|||+++ .+|..+.+++..+.+++.+++++|+++||+.|++.|+
T Consensus 95 ~~~v~~G~l~~---~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~ 169 (288)
T 1jxh_A 95 IDTTKIGMLAE---TDIVEAVAERLQRH--HVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALL 169 (288)
T ss_dssp CSEEEECCCCS---HHHHHHHHHHHHHT--TCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHH
T ss_pred CCEEEECCCCC---HHHHHHHHHHHHHC--CCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHc
Confidence 68899999874 45666777777776 775 99999998 4554445555556666557899999999999999999
Q ss_pred CC-CCCCHHHHHHHHHHHHhcCCCeEEEeeeecCC-----cEEEecc-----------cCCCCCchHHHHHHHHHHHccC
Q 022988 165 GF-RIGSEADGREACKILHAAGPAKVVITSINIDG-----NLFLIGS-----------HQKEKGTGDLMTALLLGWSNKY 227 (289)
Q Consensus 165 g~-~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G-----~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~ 227 (289)
|. +..+.++..+++++|.++|++.|++|+|. +| .++..++ .+||+||||+|+|+|+++|++
T Consensus 170 g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~-~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~- 247 (288)
T 1jxh_A 170 DAPHARTEQEMLAQGRALLAMGCEAVLMKGGH-LEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR- 247 (288)
T ss_dssp TCCCCCSHHHHHHHHHHHHHTTCSEEEEBC----------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG-
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCEEEEeccC-CCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc-
Confidence 98 77777888899999999999999999997 77 6665432 158999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q 022988 228 RDNLDIAAELAVSSLQALLQRTV 250 (289)
Q Consensus 228 g~~~~~A~~~A~a~a~~~l~~~~ 250 (289)
|.++++|+++|+++++.+++++.
T Consensus 248 g~~~~~A~~~A~a~a~~~v~~~~ 270 (288)
T 1jxh_A 248 HRSWGETVNEAKAWLSAALAQAD 270 (288)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTGG
T ss_pred CCCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998885
No 11
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.92 E-value=1.3e-24 Score=196.16 Aligned_cols=205 Identities=19% Similarity=0.183 Sum_probs=147.3
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCC----------CCCc---ce-----eeCCHHHHHHHHHHHHhC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTF---KG-----QVLNGQQLCDLIEGLEAN 82 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg----------~~~i---~g-----~~l~~~~~~~~~~~l~~~ 82 (289)
++|.+|.|. ....|++.||+++++.... ..+|+ ...+ .+ ..+++++++...+.+..
T Consensus 52 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~-~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 129 (319)
T 3lhx_A 52 YVTALGTDSFSQQMLDAWHGENVDTSLTQRME-NRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELAN- 129 (319)
T ss_dssp EECEECSSHHHHHHHHHHHTTTEECTTCEECT-TCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTT-
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcC-CCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcC-
Confidence 457788775 3455899999988764321 11232 1111 11 12444455555555654
Q ss_pred CCcccCEE-EEeecC---CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChh-HHHHHHHhhcCCceEEcCCH
Q 022988 83 NLLYYTHL-LTGYIG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSE-LVSVYREKVVPVASMLTPNQ 157 (289)
Q Consensus 83 ~~~~~~~v-~~G~l~---~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~-~~~~l~~~ll~~~dii~pN~ 157 (289)
++.+ +.|+.+ ++.+.+.+.++++.++++ ++++++||+++.. +|...+ ..+.+. .+++++|+++||+
T Consensus 130 ----~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~-~ll~~~di~~~n~ 200 (319)
T 3lhx_A 130 ----FDYLYLSGISLAILSPTSREKLLSLLRECRAK--GGKVIFDNNYRPR--LWASKEETQQVYQ-QMLECTDIAFLTL 200 (319)
T ss_dssp ----CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSCHHHHHHHHH-HHHTTCSEEEEEH
T ss_pred ----CCEEEEcCchhhhcCchhHHHHHHHHHHHHhc--CCEEEEeCcCCcc--cccCHHHHHHHHH-HHHhhCCcccCCH
Confidence 3443 445432 456678899999999987 8999999987642 554433 334444 4899999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc---------------cCCCCCchHHHHHHHHH
Q 022988 158 FEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS---------------HQKEKGTGDLMTALLLG 222 (289)
Q Consensus 158 ~E~~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~---------------~~dt~GAGD~f~g~l~~ 222 (289)
.|++.|+|. ++.+++++.|+++|++.|+||+|+ +|++++..+ .+||+||||+|+|+|++
T Consensus 201 ~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~ 274 (319)
T 3lhx_A 201 DDEDALWGQ-----QPVEDVIARTHNAGVKEVVVKRGA-DSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLA 274 (319)
T ss_dssp HHHHHHHCC-----CCHHHHHHHHHHTTCSEEEEEETT-EEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHH
T ss_pred HHHHHHhCC-----CCHHHHHHHHHhcCCCEEEEEECC-CCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHH
Confidence 999999997 356778889999999999999996 776654321 26899999999999999
Q ss_pred HHccCCCCHHHHHHHHHHHHHHHHH
Q 022988 223 WSNKYRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 223 ~l~~~g~~~~~A~~~A~a~a~~~l~ 247 (289)
+|.+ |+++++|+++|+++++.+++
T Consensus 275 ~l~~-g~~~~~a~~~A~~~aa~~v~ 298 (319)
T 3lhx_A 275 VRLT-GGSAENAAKRGHLTASTVIQ 298 (319)
T ss_dssp HHTT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHc-CCCHHHHHHHHHHHHHhhhc
Confidence 9998 99999999999999766654
No 12
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.91 E-value=1.9e-23 Score=187.58 Aligned_cols=202 Identities=17% Similarity=0.167 Sum_probs=150.5
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEE--------eecCCCCCCc---ceeeCCHHHHHHHHHHHHhCCCcccC-EE
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQ--------FSNHTGYPTF---KGQVLNGQQLCDLIEGLEANNLLYYT-HL 90 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~--------~~~~tg~~~i---~g~~l~~~~~~~~~~~l~~~~~~~~~-~v 90 (289)
.|.+|.|. ....|++.||+++++.... .....|...+ .|..+++++++.+.+.+.... ..+ ++
T Consensus 58 i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~ 135 (309)
T 3umo_A 58 IFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEIE--SGAILV 135 (309)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCEEEEECSSCCCCCEEEEETTTCCEEEEECCCCCCCHHHHHHHHHHHTTSC--TTCEEE
T ss_pred EEEecCchHHHHHHHHHHcCCceEEEEecCCCeeEEEEEECCCCcEEEEEcCCCCCCHHHHHHHHHHHHhcC--CCCEEE
Confidence 46677653 3445889999998775321 0011121111 234577888877666654322 233 45
Q ss_pred EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCC--ceEEcCCHHHHHHhhCCCC
Q 022988 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPV--ASMLTPNQFEAEQLTGFRI 168 (289)
Q Consensus 91 ~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~--~dii~pN~~E~~~L~g~~~ 168 (289)
+.|+++.+.+.+.+.++++.+|++ ++++++||.+. .+.+ +++. +|+++||+.|++.|+|.+.
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~a~~~--~~~v~~D~~~~-------------~l~~-~l~~~~~dil~~N~~E~~~l~g~~~ 199 (309)
T 3umo_A 136 ISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSGE-------------ALSA-ALAIGNIELVKPNQKELSALVNREL 199 (309)
T ss_dssp EESCCCTTCCHHHHHHHHHHHHHT--TCEEEEECCHH-------------HHHH-HTSSCCBSEECCBHHHHHHHHTSCC
T ss_pred EEccCCCCCCHHHHHHHHHHHHhc--CCEEEEECCcH-------------HHHH-HhccCCCeEEEeCHHHHHHHhCCCC
Confidence 678887767788899999999988 89999999431 1333 6666 5999999999999999887
Q ss_pred CCHHHHHHHHHHHHhcCC-CeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHH
Q 022988 169 GSEADGREACKILHAAGP-AKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAE 236 (289)
Q Consensus 169 ~~~~~~~~a~~~L~~~g~-~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~ 236 (289)
.+.++..++++.|+++|+ +.|++|.|+ +|+++..++ .+||+||||+|+|+|+++|.+ |+++++|++
T Consensus 200 ~~~~~~~~~~~~l~~~g~~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~-g~~~~~a~~ 277 (309)
T 3umo_A 200 TQPDDVRKAAQEIVNSGKAKRVVVSLGP-QGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAE-NASLEEMVR 277 (309)
T ss_dssp CSTTHHHHHHHHHHHTTSBSCEEEECGG-GCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEEEcCc-ccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHc-CCCHHHHHH
Confidence 777788999999999987 899999997 888776542 269999999999999999998 999999999
Q ss_pred HHHHHHHHHHH
Q 022988 237 LAVSSLQALLQ 247 (289)
Q Consensus 237 ~A~a~a~~~l~ 247 (289)
+|+++++.+++
T Consensus 278 ~A~~~aa~~v~ 288 (309)
T 3umo_A 278 FGVAAGSAATL 288 (309)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99988655553
No 13
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.91 E-value=3.3e-24 Score=195.52 Aligned_cols=208 Identities=14% Similarity=0.090 Sum_probs=148.7
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCC----------CC-cce--------eeCCHHHHHHHHHHHHh
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY----------PT-FKG--------QVLNGQQLCDLIEGLEA 81 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~----------~~-i~g--------~~l~~~~~~~~~~~l~~ 81 (289)
+.|.+|.|. ....|++.||+++++.... ..|+. .. +.. ..+++++++ ..+.+.+
T Consensus 53 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~--~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~~~~~~ 129 (346)
T 3ktn_A 53 LITKLPANRLGEAGKAALRKLGISDQWVGEKG--DHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD-FEAFLAE 129 (346)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECC--SCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC-HHHHHTT
T ss_pred EEEecCCCHHHHHHHHHHHHcCCcceEEEeCC--CceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC-hHHHhCC
Confidence 357788775 3455899999998775321 22221 01 100 124444443 1223443
Q ss_pred CCCcccCEEE-EeecC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC---hhHHHHHHHhhcCCceEEcC
Q 022988 82 NNLLYYTHLL-TGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP---SELVSVYREKVVPVASMLTP 155 (289)
Q Consensus 82 ~~~~~~~~v~-~G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~---~~~~~~l~~~ll~~~dii~p 155 (289)
++.+. .|+.+ ++...+.+.++++.++++ +++++|||+++.. +|.. +...+.+++ +++++|+++|
T Consensus 130 -----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~r~~--~~~~~~~~~~~~~~~~-ll~~~dil~~ 199 (346)
T 3ktn_A 130 -----VDMVHICGISLSLTEKTRDAALILAQKAHAY--QKKVCFDFNYRPS--LNTANSALFMRQQYER-ILPYCDIVFG 199 (346)
T ss_dssp -----CSEEEECTHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCCHHHHHHHHHHHHH-HGGGCSEEEC
T ss_pred -----CCEEEEeCccccCCHHHHHHHHHHHHHHHHc--CCEEEEeCCCChH--HcCCccHHHHHHHHHH-HHHhCCEEEc
Confidence 44444 45543 556678899999999987 8999999987653 4543 444555655 8899999999
Q ss_pred CHHHHHHhhCCC-CC---CHHHHHHHHHHHHhc-CCCeEEEeeeecCC-------cEEEecc-----------cCCCCCc
Q 022988 156 NQFEAEQLTGFR-IG---SEADGREACKILHAA-GPAKVVITSINIDG-------NLFLIGS-----------HQKEKGT 212 (289)
Q Consensus 156 N~~E~~~L~g~~-~~---~~~~~~~a~~~L~~~-g~~~Vvvt~g~~~G-------~~~~~~~-----------~~dt~GA 212 (289)
|+.|++.|+|.+ .. +.+++.++++.|++. |++.|+||+|. +| ++++.++ .+||+||
T Consensus 200 N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~-~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGA 278 (346)
T 3ktn_A 200 SRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRS-HSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGA 278 (346)
T ss_dssp CHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEE-ECSSCEEEEEEEECSSCEEECCCEECCCSCCTTH
T ss_pred cHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCc-cccccCcceEEEEECCceEEeCCCccccCCCCch
Confidence 999999999986 32 456788889999874 99999999997 77 6655432 2799999
Q ss_pred hHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 022988 213 GDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 213 GD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~ 247 (289)
||+|+|+|+++|.+ |+++++|+++|+++++.+++
T Consensus 279 GDaF~ag~~~~l~~-g~~l~~a~~~A~a~aa~~v~ 312 (346)
T 3ktn_A 279 GDAYAAGILYGYSQ-NWSLEKAVTFATVNGVLAHT 312 (346)
T ss_dssp HHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 99999999999998 99999999999998755553
No 14
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.91 E-value=2.7e-24 Score=195.66 Aligned_cols=204 Identities=18% Similarity=0.181 Sum_probs=141.2
Q ss_pred cCccchhh----cHHHHHhCCCcceeeceEEeecCCCC-----------CCc-----c--eeeCCHHHHHHHHHHHHhCC
Q 022988 26 QGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY-----------PTF-----K--GQVLNGQQLCDLIEGLEANN 83 (289)
Q Consensus 26 ~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~-----------~~i-----~--g~~l~~~~~~~~~~~l~~~~ 83 (289)
+|.+|.|. ....|++.||+++++.... ...|+. ..+ . ...+++++++. +.+..
T Consensus 78 ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~-~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~--~~l~~-- 152 (336)
T 4du5_A 78 ASRLGTDSMGRYLLAAMAAEGIDCSHVVCDA-TQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE--AWLLS-- 152 (336)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCEEEEEEECT-TSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH--HHHTT--
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcC-CCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH--hHhcc--
Confidence 46677764 3445888999988765321 112221 111 0 12344444432 22332
Q ss_pred CcccCEE-EEeecC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhH-HHHHHHhhcCCceEEcCCHHH
Q 022988 84 LLYYTHL-LTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSEL-VSVYREKVVPVASMLTPNQFE 159 (289)
Q Consensus 84 ~~~~~~v-~~G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~-~~~l~~~ll~~~dii~pN~~E 159 (289)
++.+ +.|+.+ ++...+.+.++++.+|++ ++++++||+++.. +|...+. .+.+. .+++++|+++||+.|
T Consensus 153 ---~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~-~ll~~~dil~pN~~E 224 (336)
T 4du5_A 153 ---ARHLHATGVFPAISATTLPAARKTMDLMRAA--GRSVSFDPNLRPT--LWATPELMRDAIN-DLATRADWVLPGMEE 224 (336)
T ss_dssp ---EEEEEEESSGGGSCTTHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSSHHHHHHHHH-HHHTTCSEECCBHHH
T ss_pred ---CCEEEEcCchhhCChHHHHHHHHHHHHHHHC--CCEEEEeCcCCch--hcCChHHHHHHHH-HHHHhCCEEECCHHH
Confidence 4444 467543 556678888999999987 8999999987643 5544333 44444 488999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHccC
Q 022988 160 AEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNKY 227 (289)
Q Consensus 160 ~~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~~ 227 (289)
++.|+|. ++.+++++.|+++|++.|+||+|+ +|++++.++ .+||+||||+|+|+|+++|.+
T Consensus 225 a~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~- 297 (336)
T 4du5_A 225 GRFLTGE-----TTPEGVARFYRQLGAKLVVVKLGA-EGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLD- 297 (336)
T ss_dssp HHHHHCC-----CSHHHHHHHHHHTTCSEEEEECGG-GCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHT-
T ss_pred HHHHhCC-----CCHHHHHHHHHhcCCCEEEEEecC-CceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHc-
Confidence 9999996 356778889999999999999997 888766432 268999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 022988 228 RDNLDIAAELAVSSLQALLQRT 249 (289)
Q Consensus 228 g~~~~~A~~~A~a~a~~~l~~~ 249 (289)
|+++++|+++|+++++.+++..
T Consensus 298 g~~l~~a~~~A~~~aa~~v~~~ 319 (336)
T 4du5_A 298 GLGVPEAVKRGAWIGARAVQVL 319 (336)
T ss_dssp TCCHHHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHHhccC
Confidence 9999999999999976666544
No 15
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.91 E-value=6.3e-24 Score=190.65 Aligned_cols=199 Identities=22% Similarity=0.301 Sum_probs=146.3
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC----------CCCCc---ce--eeCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTF---KG--QVLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t----------g~~~i---~g--~~l~~~~~~~~~~~l~~~~~~ 85 (289)
+.|.+|.|. ....|++.||+++++.... ..+| |...+ .| ..+++++++...+.+...
T Consensus 60 ~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~-~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 135 (309)
T 1rkd_A 60 FIACTGDDSIGESVRQQLATDNIDITPVSVIK-GESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANA--- 135 (309)
T ss_dssp EEEEEESSTTHHHHHHHHHTTTEECTTEEEET-TCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHC---
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCccceEecC-CCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccC---
Confidence 357788775 3445889999988765321 0122 21111 12 257777776655556543
Q ss_pred ccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhC
Q 022988 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (289)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g 165 (289)
+.+.++. ..+.+.+.++++.++++ ++++++||+++.. |. ..+++++|+++||+.|++.|+|
T Consensus 136 --~~v~~~~---~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~---~~---------~~ll~~~dil~~N~~E~~~l~g 196 (309)
T 1rkd_A 136 --SALLMQL---ESPLESVMAAAKIAHQN--KTIVALNPAPARE---LP---------DELLALVDIITPNETEAEKLTG 196 (309)
T ss_dssp --SEEEECS---SSCHHHHHHHHHHHHHT--TCEEEECCCSCCC---CC---------HHHHTTCSEECCCHHHHHHHHS
T ss_pred --CEEEEeC---CCCHHHHHHHHHHHHHc--CCEEEEECCcccc---ch---------HHHHhhCCEEEcCHHHHHHHhC
Confidence 4444422 12346777888888887 8999999987632 21 1378899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHH
Q 022988 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIA 234 (289)
Q Consensus 166 ~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A 234 (289)
.+..+.+++.++++.|+++|++.|++|+|+ +|+++...+ .+||+||||+|+|+|+++|.+ |.++++|
T Consensus 197 ~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~-g~~~~~a 274 (309)
T 1rkd_A 197 IRVENDEDAAKAAQVLHEKGIRTVLITLGS-RGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLE-EKPLPEA 274 (309)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCSEEEEECGG-GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEEECC-CcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHc-CCCHHHH
Confidence 877777888899999999999999999997 888765432 268999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHH
Q 022988 235 AELAVSSLQALLQR 248 (289)
Q Consensus 235 ~~~A~a~a~~~l~~ 248 (289)
+++|++++..++++
T Consensus 275 ~~~a~~~aa~~~~~ 288 (309)
T 1rkd_A 275 IRFAHAAAAIAVTR 288 (309)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCC
Confidence 99999987666543
No 16
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.91 E-value=5e-24 Score=190.75 Aligned_cols=197 Identities=17% Similarity=0.260 Sum_probs=148.1
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC----------CCCCc---ce--eeCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTF---KG--QVLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t----------g~~~i---~g--~~l~~~~~~~~~~~l~~~~~~ 85 (289)
++|.+|.|. ....|++.||+++++.... ...| |...+ .| ..+++++++...+.+..
T Consensus 59 ~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~---- 133 (304)
T 3ry7_A 59 FITKIGTDGVADFILEDFKVAHIDTSYIIKTA-EAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIIN---- 133 (304)
T ss_dssp EECEEESSCTTHHHHHHHHHTTCBCTTCEEES-SSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHT----
T ss_pred EEEEeCCChHHHHHHHHHHHcCCcchhEEEcC-CCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhcc----
Confidence 357888775 4455899999988765422 1122 21111 12 35777787766566664
Q ss_pred ccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhC
Q 022988 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (289)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g 165 (289)
++.+.++. +.+.+.+.++++.++++ ++++++||.+... . + ..+++++|+++||+.|++.|+|
T Consensus 134 -~~~v~~~~---~~~~~~~~~~~~~a~~~--~~~v~~D~~~~~~----~-------~-~~ll~~~dil~~N~~E~~~l~g 195 (304)
T 3ry7_A 134 -ADFVVAQL---EVPIPAIISAFEIAKAH--GVTTVLNPAPAKA----L-------P-NELLSLIDIIVPNETEAELLSG 195 (304)
T ss_dssp -CSEEEEET---TSCHHHHHHHHHHHHHT--TCEEEEECCSCCC----C-------C-HHHHTTCSEECCBHHHHHHHHS
T ss_pred -CCEEEEcC---CCCHHHHHHHHHHHHHc--CCEEEEeCCcccc----c-------c-HHHHHhCCEEecCHHHHHHHhC
Confidence 34444432 33467788888999987 8999999976421 1 1 2378899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCC-CCHHH
Q 022988 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYR-DNLDI 233 (289)
Q Consensus 166 ~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g-~~~~~ 233 (289)
.+..+.+++.+++++|+++|++.|++|+|+ +|++++.++ .+||+||||+|+|+|+++|.+ | +++++
T Consensus 196 ~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~-g~~~~~~ 273 (304)
T 3ry7_A 196 IKVTNEQSMKDNANYFLSIGIKTVLITLGK-QGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNK-SQDNLAD 273 (304)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCCEEEEECGG-GCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCT-TCTTHHH
T ss_pred CCCCChhHHHHHHHHHHHcCCCEEEEEeCC-CceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHc-CCCCHHH
Confidence 988777889999999999999999999997 888776542 269999999999999999998 9 99999
Q ss_pred HHHHHHHHHHHHH
Q 022988 234 AAELAVSSLQALL 246 (289)
Q Consensus 234 A~~~A~a~a~~~l 246 (289)
|+++|++++..++
T Consensus 274 a~~~A~~~aa~~~ 286 (304)
T 3ry7_A 274 AIDFGNKASSLTV 286 (304)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999865544
No 17
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.91 E-value=8.9e-24 Score=191.64 Aligned_cols=203 Identities=16% Similarity=0.189 Sum_probs=143.9
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCC---------CCc---cee-----eCCHHHHHHHHHHHHhCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY---------PTF---KGQ-----VLNGQQLCDLIEGLEANN 83 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~---------~~i---~g~-----~l~~~~~~~~~~~l~~~~ 83 (289)
++|.+|.|. ....|++.||+++++.... ..+|+. ..+ .+. .++..++.. +.+.+
T Consensus 71 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~-~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~-- 145 (328)
T 4e69_A 71 YFSAIGDDALSQQMRAAMSAAGIDGGGLRVIP-GRTVGLYLITLEQGERSFAYWRGQSAARELAGDADALA--AAMAR-- 145 (328)
T ss_dssp EECEECSSHHHHHHHHHHHHTTEECTTCEECT-TCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHHHH--HHHTT--
T ss_pred EEEeeCCCHHHHHHHHHHHHcCCccceEEEcC-CCCCeEEEEEecCCceEEEEeCCCCHHHhhcCccccch--HHhcC--
Confidence 457778765 3445889999887764321 112221 111 011 122222221 33443
Q ss_pred CcccCEE-EEeec---CCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC-hhHHHHHHHhhcCCceEEcCCHH
Q 022988 84 LLYYTHL-LTGYI---GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQF 158 (289)
Q Consensus 84 ~~~~~~v-~~G~l---~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~-~~~~~~l~~~ll~~~dii~pN~~ 158 (289)
++.+ +.|+. .++.+.+.+.++++.++++ ++++++||++++. +|.. ++..+.+++ +++++|+++||+.
T Consensus 146 ---~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~ 217 (328)
T 4e69_A 146 ---ADVVYFSGITLAILDQCGRATLLRALAQARAT--GRTIAFDPNLRPR--LWAGTGEMTETIMQ-GAAVSDIALPSFE 217 (328)
T ss_dssp ---CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCSCHHHHHHHHHH-HHTTCSEECCBHH
T ss_pred ---CCEEEECCchhhccCchHHHHHHHHHHHHHhC--CCEEEEeCCCChh--hcCCHHHHHHHHHH-HHHhCCEEeCCHH
Confidence 4444 44542 2466788899999999987 8999999987643 5533 333444444 8999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHcc
Q 022988 159 EAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNK 226 (289)
Q Consensus 159 E~~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~ 226 (289)
|++.|+|.+ +.+++++.|.++|++.|+||+|+ +|++++..+ .+||+||||+|+|+|+++|.+
T Consensus 218 E~~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 291 (328)
T 4e69_A 218 DEAAWFGDA-----GPDATADRYARAGVRSVVVKNGP-HAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLA 291 (328)
T ss_dssp HHHHHHTCS-----SHHHHHHHHHTTTCSEEEEBCTT-SCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCC-----CHHHHHHHHHhcCCCEEEEEeCC-CCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHC
Confidence 999999973 67788889999999999999997 888765431 268999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 022988 227 YRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 227 ~g~~~~~A~~~A~a~a~~~l~ 247 (289)
|+++++|+++|+++++.+++
T Consensus 292 -g~~l~~a~~~A~~~aa~~v~ 311 (328)
T 4e69_A 292 -GQPLETAIAAAAALAGQVVQ 311 (328)
T ss_dssp -TCCHHHHHHHHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHHHHc
Confidence 99999999999998766654
No 18
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.91 E-value=1.8e-23 Score=189.76 Aligned_cols=200 Identities=21% Similarity=0.177 Sum_probs=147.3
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCC----------CCCc---cee--eCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTF---KGQ--VLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg----------~~~i---~g~--~l~~~~~~~~~~~l~~~~~~ 85 (289)
++|.+|.|. ....|++.||+++++.... ..+|+ -..+ .|. .+++++++...+.+..
T Consensus 80 ~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~-~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~---- 154 (331)
T 2fv7_A 80 MVCKVGKDSFGNDYIENLKQNDISTEFTYQTK-DAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISR---- 154 (331)
T ss_dssp EEEEEESSHHHHHHHHHHHTTTEECTTEEEES-SSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHH----
T ss_pred EEEEECCChhHHHHHHHHHHcCCcceeeEecC-CCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhcc----
Confidence 357778775 3445888999988765421 11222 1111 121 5677777665555554
Q ss_pred ccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhC
Q 022988 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (289)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g 165 (289)
++++.++... +.+.+.++++.++++ +++++|||+++.. .|.. .+++++|+++||+.|++.|+|
T Consensus 155 -~~~v~~~~~~---~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~---------~ll~~~dil~~N~~Ea~~l~g 217 (331)
T 2fv7_A 155 -AKVMVCQLEI---TPATSLEALTMARRS--GVKTLFNPAPAIA--DLDP---------QFYTLSDVFCCNESEAEILTG 217 (331)
T ss_dssp -CSEEEECSSS---CHHHHHHHHHHHHHT--TCEEEECCCSCCT--TCCT---------HHHHTCSEEEEEHHHHHHHHS
T ss_pred -CCEEEEecCC---CHHHHHHHHHHHHHc--CCEEEEeCCcccc--cchH---------HHHhcCCEEEeCHHHHHHHhC
Confidence 4555554322 246777888889887 8999999987632 2211 377899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-------------cCCCCCchHHHHHHHHHHHccCC--CC
Q 022988 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-------------HQKEKGTGDLMTALLLGWSNKYR--DN 230 (289)
Q Consensus 166 ~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-------------~~dt~GAGD~f~g~l~~~l~~~g--~~ 230 (289)
.+..+.+++.+++++|+++|++.|+||+|+ +|++++..+ .+||+||||+|+|+|+++|++ | ++
T Consensus 218 ~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~-~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g~~~~ 295 (331)
T 2fv7_A 218 LTVGSAADAGEAALVLLKRGCQVVIITLGA-EGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAY-YPNLS 295 (331)
T ss_dssp SCCCSHHHHHHHHHHHHTTTCSEEEEECGG-GCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHH-CTTSC
T ss_pred CCCCChhHHHHHHHHHHHcCCCEEEEEECC-CceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHh-CCCCC
Confidence 877777888899999999999999999997 788765432 168999999999999999998 9 99
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 022988 231 LDIAAELAVSSLQALLQR 248 (289)
Q Consensus 231 ~~~A~~~A~a~a~~~l~~ 248 (289)
+++|+++|+++++.++++
T Consensus 296 ~~~a~~~A~~~aa~~v~~ 313 (331)
T 2fv7_A 296 LEDMLNRSNFIAAVSVQA 313 (331)
T ss_dssp HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999997666643
No 19
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.91 E-value=6.3e-23 Score=183.94 Aligned_cols=204 Identities=19% Similarity=0.185 Sum_probs=151.3
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEE-----eecCCCCCCc---ceeeCCHHHHHHHHHHHHhCCCcccCEE-EEe
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQ-----FSNHTGYPTF---KGQVLNGQQLCDLIEGLEANNLLYYTHL-LTG 93 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~-----~~~~tg~~~i---~g~~l~~~~~~~~~~~l~~~~~~~~~~v-~~G 93 (289)
.|.+|.+. ....|++.||+++++.... +.-..|...+ .|..+++++++...+.+.... .++.+ +.|
T Consensus 56 ~~~vG~~~g~~i~~~L~~~gv~~~~v~~~~~t~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~v~~~g 133 (306)
T 2abq_A 56 LGFLGGFTGAYVRNALEKEEIGLSFIEVEGDTRINVKIKGKQETELNGTAPLIKKEHVQALLEQLTELE--KGDVLVLAG 133 (306)
T ss_dssp EEEEEHHHHHHHHHHHHHTTCEECCEEESSCCEEEEEEESSSCEEEBCCCCCCCHHHHHHHHHHHTTCC--TTCEEEEES
T ss_pred EEEecchhHHHHHHHHHHcCCceEEEEcCCCCceEEEEeCCceEEEECCCCCCCHHHHHHHHHHHHhcc--CCCEEEEec
Confidence 56777622 3445899999998764311 0001221111 234577778777665553211 35654 468
Q ss_pred ecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC-CceEEcCCHHHHHHhhCCCCCCHH
Q 022988 94 YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGSEA 172 (289)
Q Consensus 94 ~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~-~~dii~pN~~E~~~L~g~~~~~~~ 172 (289)
+++.+.+.+.+.++++.++++ ++++++||+.. .+.+ +++ ++|+++||+.|++.|+|.+..+.+
T Consensus 134 ~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~-~l~~~~dil~~N~~E~~~l~g~~~~~~~ 197 (306)
T 2abq_A 134 SVPQAMPQTIYRSMTQIAKER--GAFVAVDTSGE-------------ALHE-VLAAKPSFIKPNHHELSELVSKPIASIE 197 (306)
T ss_dssp CCCTTSCTTHHHHHHHHHHTT--TCEEEEECCHH-------------HHHH-HGGGCCSEECCBHHHHHHHHTSCCCSHH
T ss_pred CCCCCCCHHHHHHHHHHHHhc--CCEEEEECChH-------------HHHH-HHhcCCcEEecCHHHHHHHhCCCCCCHH
Confidence 877655567788899999987 89999999421 1233 788 999999999999999998777778
Q ss_pred HHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 022988 173 DGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAVSS 241 (289)
Q Consensus 173 ~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~ 241 (289)
++.++++.|+++|++.|++|+|+ +|+++..++ .+||+||||+|+|+|+++|.+ |+++++|+++|+++
T Consensus 198 ~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~-g~~~~~a~~~A~a~ 275 (306)
T 2abq_A 198 DAIPHVQRLIGEGIESILVSFAG-DGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQE-GKSLEDAVPFAVAA 275 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEEECGG-GCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHT-TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCC-CceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 88889999999999999999997 888765432 269999999999999999998 99999999999999
Q ss_pred HHHHHHHH
Q 022988 242 LQALLQRT 249 (289)
Q Consensus 242 a~~~l~~~ 249 (289)
++.++++.
T Consensus 276 aa~~v~~~ 283 (306)
T 2abq_A 276 GSATAFSD 283 (306)
T ss_dssp HHHHHHSS
T ss_pred HHHHhcCc
Confidence 87776554
No 20
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.90 E-value=2.9e-24 Score=194.86 Aligned_cols=202 Identities=18% Similarity=0.216 Sum_probs=145.3
Q ss_pred cCccchhh----cHHHHHhCCCcceeeceEEeecCC----------CCCCc----ce---eeCCHHHHHHHHHHHHhCCC
Q 022988 26 QGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTF----KG---QVLNGQQLCDLIEGLEANNL 84 (289)
Q Consensus 26 ~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t----------g~~~i----~g---~~l~~~~~~~~~~~l~~~~~ 84 (289)
.|.+|.|. ....|++.||+++++.... ..+| |...+ .+ ..++++++.. +.+.
T Consensus 57 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~---- 129 (330)
T 3iq0_A 57 ISCVGNDGFGDINIHRLAADGVDIRGISVLP-LEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE--NILK---- 129 (330)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEET-TSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG--GGGT----
T ss_pred EEEeCCChHHHHHHHHHHHcCCCeeeEEEcC-CCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH--hHhc----
Confidence 57778774 4445899999988765321 1122 22211 01 1133333221 1122
Q ss_pred cccCE-EEEeecC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHH
Q 022988 85 LYYTH-LLTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (289)
Q Consensus 85 ~~~~~-v~~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~ 162 (289)
..+. ++.|+.+ ++...+.+.++++.++++ ++++++||+++.. +|..++..+.+.+ +++++|+++||+.|++.
T Consensus 130 -~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 203 (330)
T 3iq0_A 130 -DCTHFHIMGSSLFSFHMVDAVKKAVTIVKAN--GGVISFDPNIRKE--MLDIPEMRDALHF-VLELTDIYMPSEGEVLL 203 (330)
T ss_dssp -TEEEEEEEGGGCSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GGGSHHHHHHHHH-HHHTCSEECCBGGGTTT
T ss_pred -cCCEEEEechhhcCcchHHHHHHHHHHHHHc--CCEEEEcCCCCcc--ccCcHHHHHHHHH-HHhhCCEEecCHHHHHH
Confidence 2444 4567665 566678889999999988 8999999987643 5555555666655 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCH
Q 022988 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNL 231 (289)
Q Consensus 163 L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~ 231 (289)
|+|. ++.+++++.|+++|++.|+||+|+ +|++++.++ .+||+||||+|+|+|+++|.+ |.++
T Consensus 204 l~g~-----~~~~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g~~~ 276 (330)
T 3iq0_A 204 LSPH-----STPERAIAGFLEEGVKEVIVKRGN-QGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQL-GFDA 276 (330)
T ss_dssp TCSC-----SSHHHHHHHHHHHTCSEEEEECGG-GCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT-TCCH
T ss_pred HhCC-----CCHHHHHHHHHHcCCCEEEEEeCC-CceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHc-CCCH
Confidence 9997 356778889988999999999997 888776542 269999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHH
Q 022988 232 DIAAELAVSSLQALLQ 247 (289)
Q Consensus 232 ~~A~~~A~a~a~~~l~ 247 (289)
++|+++|+++++.+++
T Consensus 277 ~~a~~~A~~~aa~~v~ 292 (330)
T 3iq0_A 277 HRALQYANACGALAVT 292 (330)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999998755553
No 21
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.90 E-value=2.3e-23 Score=188.73 Aligned_cols=197 Identities=20% Similarity=0.187 Sum_probs=141.4
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCC----------CCCc--c--e--eeCCHHHHHHHHHHHHhCCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTF--K--G--QVLNGQQLCDLIEGLEANNL 84 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg----------~~~i--~--g--~~l~~~~~~~~~~~l~~~~~ 84 (289)
++|.+|.|. ....|++.||+++++.... ..+|+ ...+ . + ..+++++++...+.+...
T Consensus 61 ~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~-~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 137 (328)
T 3kzh_A 61 FMSILGNDEHGKSIVEHSKKIGYHMDDSMVIE-GGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIFENA-- 137 (328)
T ss_dssp EECEECSSHHHHHHHHHHHHHTEECTTCEECT-TCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHHHTC--
T ss_pred EEEEecCcHHHHHHHHHHHHcCCCccceEEeC-CCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhhccC--
Confidence 357778764 3445888999887653221 01222 1111 0 1 245666666655556543
Q ss_pred cccCEE-EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHh
Q 022988 85 LYYTHL-LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (289)
Q Consensus 85 ~~~~~v-~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L 163 (289)
+.+ +.|.++ +.+..+++ ++++ ++++++||++.. ..+.+. .+++++|+++||+.|++.|
T Consensus 138 ---~~~~~~~~~~-----~~~~~l~~-a~~~--~~~v~~D~~~~~---------~~~~~~-~~l~~~dil~~N~~E~~~l 196 (328)
T 3kzh_A 138 ---EYTVLDSDNP-----EIMEYLLK-NFKD--KTNFILDPVSAE---------KASWVK-HLIKDFHTIKPNRHEAEIL 196 (328)
T ss_dssp ---SEEEEESSCH-----HHHHHHHH-HHTT--TSEEEEECCSHH---------HHHTST-TTGGGCSEECCBHHHHHHH
T ss_pred ---CEEEEeCCcH-----HHHHHHHH-Hhhc--CCcEEEEeCCHH---------HHHHHH-HHhcCCcEEeCCHHHHHHH
Confidence 433 334432 55566666 6665 899999996532 111222 3788999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHH
Q 022988 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLD 232 (289)
Q Consensus 164 ~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~ 232 (289)
+|.+..+.+++.++++.|+++|++.|+||+|+ +|+++..++ .+||+||||+|+|+|+++|.+ |++++
T Consensus 197 ~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~-g~~~~ 274 (328)
T 3kzh_A 197 AGFPITDTDDLIKASNYFLGLGIKKVFISLDA-DGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMN-KMPIE 274 (328)
T ss_dssp HTSCCCSHHHHHHHHHHHHHHTCCEEEEECGG-GCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHT-TCCHH
T ss_pred HCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCC-CCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHc-CCCHH
Confidence 99888778889999999999999999999997 888776542 279999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHH
Q 022988 233 IAAELAVSSLQALLQ 247 (289)
Q Consensus 233 ~A~~~A~a~a~~~l~ 247 (289)
+|+++|+++++.+++
T Consensus 275 ~a~~~A~a~aa~~v~ 289 (328)
T 3kzh_A 275 DIVKFAMTMSNITIS 289 (328)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999766554
No 22
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.90 E-value=6e-23 Score=184.26 Aligned_cols=205 Identities=18% Similarity=0.162 Sum_probs=148.4
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEE-------e-ecCCCCCC-c--ceeeCCHHHHHHHHHHHHhCCCcccCE-E
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------F-SNHTGYPT-F--KGQVLNGQQLCDLIEGLEANNLLYYTH-L 90 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~-------~-~~~tg~~~-i--~g~~l~~~~~~~~~~~l~~~~~~~~~~-v 90 (289)
+|.+|.|. ....|++.||+++++.... + -...|-.. + .|..+++++++.+.+.+.+. +-. +. +
T Consensus 58 i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~-~~v~ 135 (309)
T 3cqd_A 58 IFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEI-ESG-AILV 135 (309)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCEEEEECSSCCCCCEEEEETTTCCEEEEECCCCCCCHHHHHHHHHHHHTS-CTT-CEEE
T ss_pred EEEecCchHHHHHHHHHHcCCCceeEEcCCCCeeEEEEEEcCCCCEEEEEcCCCCCCHHHHHHHHHHHHHh-hcC-CEEE
Confidence 46777653 3345889999998774321 0 01112111 0 23356777777665554321 113 54 4
Q ss_pred EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCc-eEEcCCHHHHHHhhCCCCC
Q 022988 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVA-SMLTPNQFEAEQLTGFRIG 169 (289)
Q Consensus 91 ~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~-dii~pN~~E~~~L~g~~~~ 169 (289)
+.|+++...+.+.+.++++.++++ ++++++||+.. .+++.+.+.+ |+++||++|++.|+|.+..
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~~l~~~~~dil~~N~~E~~~l~g~~~~ 200 (309)
T 3cqd_A 136 ISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSGE-------------ALSAALAIGNIELVKPNQKELSALVNRELT 200 (309)
T ss_dssp EESCCCTTCCHHHHHHHHHHHHTT--TCEEEEECCHH-------------HHHHHTTTCCBSEECCBHHHHHHHHTSCCC
T ss_pred EECCCCCCCCHHHHHHHHHHHHHc--CCeEEEECChH-------------HHHHHHHhCCCEEEeeCHHHHHHHhCCCCC
Confidence 668887655678888999999987 89999999532 1223244788 9999999999999998766
Q ss_pred CHHHHHHHHHHHHhcC-CCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHH
Q 022988 170 SEADGREACKILHAAG-PAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAEL 237 (289)
Q Consensus 170 ~~~~~~~a~~~L~~~g-~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~ 237 (289)
+.+++.+++++|+++| ++.|++|+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |+++++|+++
T Consensus 201 ~~~~~~~~~~~l~~~g~~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~-g~~~~~a~~~ 278 (309)
T 3cqd_A 201 QPDDVRKAAQEIVNSGKAKRVVVSLGP-QGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAE-NASLEEMVRF 278 (309)
T ss_dssp STTHHHHHHHHHHHTTSBSCEEEECGG-GCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCEEEEEecC-CceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHc-CCCHHHHHHH
Confidence 6678888999999999 9999999997 888765432 268999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHH
Q 022988 238 AVSSLQALLQRT 249 (289)
Q Consensus 238 A~a~a~~~l~~~ 249 (289)
|+++++.++++.
T Consensus 279 A~~~aa~~~~~~ 290 (309)
T 3cqd_A 279 GVAAGSAATLNQ 290 (309)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHHcCc
Confidence 999977766553
No 23
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.90 E-value=1.2e-23 Score=190.73 Aligned_cols=208 Identities=14% Similarity=0.139 Sum_probs=143.9
Q ss_pred cCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCCc-----------------ceeeCCHHHHHHHHHHHHhCCC
Q 022988 26 QGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF-----------------KGQVLNGQQLCDLIEGLEANNL 84 (289)
Q Consensus 26 ~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i-----------------~g~~l~~~~~~~~~~~l~~~~~ 84 (289)
.|.+|.|. ....|++.||+++++....-...|+...+ ....+++++++. ..+.+
T Consensus 64 i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~--~~~~~--- 138 (332)
T 2qcv_A 64 IGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE--AYIRR--- 138 (332)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH--HHHTT---
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH--HHHcc---
Confidence 56777665 34458899999887653310123332111 011344444432 12232
Q ss_pred cccCEE-EEeecC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChh-HHHHHHHhhcCCceEEcCCHHHHH
Q 022988 85 LYYTHL-LTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSE-LVSVYREKVVPVASMLTPNQFEAE 161 (289)
Q Consensus 85 ~~~~~v-~~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~-~~~~l~~~ll~~~dii~pN~~E~~ 161 (289)
++.+ +.|+++ .+.+.+.+.++++.+|++ ++++++||+++.. .|..++ ..+.+. .+++++|+++||+.|++
T Consensus 139 --~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~ll~~~dil~~N~~E~~ 211 (332)
T 2qcv_A 139 --SKLLLVSGTALSKSPSREAVLKAIRLAKRN--DVKVVFELDYRPY--SWETPEETAVYYS-LVAEQSDIVIGTREEFD 211 (332)
T ss_dssp --EEEEEEEGGGGSSTTHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSCHHHHHHHHH-HHHHHCSEEEEEHHHHH
T ss_pred --CCEEEEeCccccCchhHHHHHHHHHHHHHC--CCEEEEcCcCchh--hcCCHHHHHHHHH-HHHHhCCEEEccHHHHH
Confidence 4443 467654 333457888899999987 8999999987532 343332 333333 48899999999999999
Q ss_pred HhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEec-c-----------cCCCCCchHHHHHHHHHHHccCCC
Q 022988 162 QLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIG-S-----------HQKEKGTGDLMTALLLGWSNKYRD 229 (289)
Q Consensus 162 ~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~-~-----------~~dt~GAGD~f~g~l~~~l~~~g~ 229 (289)
.|+|.... ++..+++++|+++|++.|+||+|+ +|++++.. + .+||+||||+|+|+|+++|.+ |.
T Consensus 212 ~l~g~~~~--~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~-g~ 287 (332)
T 2qcv_A 212 VLENRTEK--GDNDETIRYLFKHSPELIVIKHGV-EGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALIS-GK 287 (332)
T ss_dssp HHTTCSSC--CCHHHHHHHHTTSSCSEEEEECGG-GCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHT-TC
T ss_pred HHhCCCcC--CCHHHHHHHHHHcCCCEEEEEECC-cceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHc-CC
Confidence 99997541 344677888888999999999997 88876654 2 168999999999999999998 99
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 022988 230 NLDIAAELAVSSLQALLQRT 249 (289)
Q Consensus 230 ~~~~A~~~A~a~a~~~l~~~ 249 (289)
++++|+++|+++++.++++.
T Consensus 288 ~~~~a~~~A~~~aa~~v~~~ 307 (332)
T 2qcv_A 288 GIETALKYGSASASIVVSKH 307 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHccC
Confidence 99999999999987766543
No 24
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.90 E-value=1.1e-22 Score=182.24 Aligned_cols=202 Identities=18% Similarity=0.201 Sum_probs=147.2
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEE-----eecCCCCCC-c--ceeeCCHHHHHHHHHHHHhCCCcccCE-EEEe
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQ-----FSNHTGYPT-F--KGQVLNGQQLCDLIEGLEANNLLYYTH-LLTG 93 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~-----~~~~tg~~~-i--~g~~l~~~~~~~~~~~l~~~~~~~~~~-v~~G 93 (289)
.|.+|.+. ....|++.||+++++.... +.-..|... + .|..+++++++.+.+.+... -..+. ++.|
T Consensus 56 ~~~vG~~~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~v~~~g 133 (306)
T 2jg5_A 56 LGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQIKNT--TSEDIVIVAG 133 (306)
T ss_dssp EEEECHHHHHHHHHHHHHTTCEECCEECSSCCEEEEEEESSSEEEEECCCCCCCHHHHHHHHHHHTTC--CTTCEEEEES
T ss_pred EEEecCcchHHHHHHHHHCCCceeEEEcCCCCeEEEEEcCCCEEEEECCCCCCCHHHHHHHHHHHHhc--cCCCEEEEeC
Confidence 46677632 3445889999988764321 000122111 1 23457778887766655321 13554 4568
Q ss_pred ecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC-CceEEcCCHHHHHHhhCCCCCCHH
Q 022988 94 YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGSEA 172 (289)
Q Consensus 94 ~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~-~~dii~pN~~E~~~L~g~~~~~~~ 172 (289)
+++...+.+.+.++++.++++ ++++++||+.. .+.+ +++ ++|+++||+.|++.|+|.+..+.+
T Consensus 134 ~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~-~l~~~~dil~~N~~E~~~l~g~~~~~~~ 197 (306)
T 2jg5_A 134 SVPSSIPSDAYAQIAQITAQT--GAKLVVDAEKE-------------LAES-VLPYHPLFIKPNKDELEVMFNTTVNSDA 197 (306)
T ss_dssp CCCTTSCTTHHHHHHHHHHHH--CCEEEEECCHH-------------HHHH-HGGGCCSEECCBHHHHHHHTTSCCCSHH
T ss_pred CCCCCCChHHHHHHHHHHHHC--CCEEEEECChH-------------HHHH-HHhcCCeEEecCHHHHHHHhCCCCCCHH
Confidence 877544456778888999887 89999999531 1233 566 699999999999999998777777
Q ss_pred HHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 022988 173 DGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAVSS 241 (289)
Q Consensus 173 ~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~ 241 (289)
++.++++.|+++|++.|++|+|+ +|+++..++ .+||+||||+|+|+|+++|.+ |+++++|+++|+++
T Consensus 198 ~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~a~ 275 (306)
T 2jg5_A 198 DVIKYGRLLVDKGAQSVIVSLGG-DGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIAS-GLSIEKAFQQAVAC 275 (306)
T ss_dssp HHHHHHHHHHHTTCSCEEEECGG-GCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEccCC-CceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 88889999999999999999997 887765432 269999999999999999998 99999999999998
Q ss_pred HHHHHH
Q 022988 242 LQALLQ 247 (289)
Q Consensus 242 a~~~l~ 247 (289)
++.+++
T Consensus 276 aa~~v~ 281 (306)
T 2jg5_A 276 GTATAF 281 (306)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 766553
No 25
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.89 E-value=7.3e-23 Score=187.04 Aligned_cols=208 Identities=14% Similarity=0.075 Sum_probs=145.0
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCC----------C-c--c--e---eeCCHHHHHHHHHHHHhC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP----------T-F--K--G---QVLNGQQLCDLIEGLEAN 82 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~----------~-i--~--g---~~l~~~~~~~~~~~l~~~ 82 (289)
+.|.+|.|. ....|++.||+++++... ...|+.. . + . + ..++++++.. ...+.
T Consensus 63 ~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~--~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~-~~~~~-- 137 (351)
T 2afb_A 63 FVTKLPNNPLGDAAAGHLRKFGVKTDYIARG--GNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW-EKILD-- 137 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEEC--SSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCH-HHHTT--
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcceeEEEC--CCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCH-HHhhc--
Confidence 357788765 344589999999877531 1223211 0 1 0 0 1223333321 11122
Q ss_pred CCcccCEEEE-eecC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH
Q 022988 83 NLLYYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (289)
Q Consensus 83 ~~~~~~~v~~-G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E 159 (289)
.++.+.+ |+++ ++...+.+.++++.++++ +++++|||+++.. +|......+.+.+ +++++|+++||+.|
T Consensus 138 ---~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~-ll~~~dil~~N~~E 209 (351)
T 2afb_A 138 ---GARWFHFSGITPPLGKELPLILEDALKVANEK--GVTVSCDLNYRAR--LWTKEEAQKVMIP-FMEYVDVLIANEED 209 (351)
T ss_dssp ---TEEEEEEETTSGGGSTTHHHHHHHHHHHHHHH--TCEEEEECCCCTT--TCCHHHHHHHHHH-HGGGCSEEEECHHH
T ss_pred ---CCCEEEEeCcccccChhHHHHHHHHHHHHHHc--CCEEEEeCCCchh--cCChHHHHHHHHH-HHhhCCEEEecHHH
Confidence 2455544 5543 344568888999999988 8999999998643 4432334455544 89999999999999
Q ss_pred HHHhhCCCCC---------CHHHHHHHHHHHHhc-CCCeEEEeeeecCCc--------EEEecc-----------cCCCC
Q 022988 160 AEQLTGFRIG---------SEADGREACKILHAA-GPAKVVITSINIDGN--------LFLIGS-----------HQKEK 210 (289)
Q Consensus 160 ~~~L~g~~~~---------~~~~~~~a~~~L~~~-g~~~Vvvt~g~~~G~--------~~~~~~-----------~~dt~ 210 (289)
++.|+|.+.. +.+++.++++.|++. |++.|+||+|+ +|+ +++.++ .+||+
T Consensus 210 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~-~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdtt 288 (351)
T 2afb_A 210 IEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRE-SISATVNYWSVMVFENGQPHFSNRYEIHIVDRV 288 (351)
T ss_dssp HHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEE-CSCSSEEEEEEEEEETTEEEECCCEEEECSCCT
T ss_pred HHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCC-cCccccccceeEEEeCCcEEEcCCCCCccCCCC
Confidence 9999998654 566788889998874 99999999997 764 444322 26999
Q ss_pred CchHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 022988 211 GTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 211 GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~ 247 (289)
||||+|+|+|+++|.+ |+++++|+++|+++++.+++
T Consensus 289 GAGDaF~ag~~~~l~~-g~~l~~a~~~A~~~aa~~v~ 324 (351)
T 2afb_A 289 GAGDSFAGALIYGSLM-GFDSQKKAEFAAAASCLKHT 324 (351)
T ss_dssp THHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999998 99999999999998766554
No 26
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.89 E-value=7e-23 Score=185.81 Aligned_cols=204 Identities=14% Similarity=0.090 Sum_probs=144.9
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEE-------eecCCCCCCc--ceeeCCHHHHHHHHHHHHhCCCcccCEE-EE
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------FSNHTGYPTF--KGQVLNGQQLCDLIEGLEANNLLYYTHL-LT 92 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~-------~~~~tg~~~i--~g~~l~~~~~~~~~~~l~~~~~~~~~~v-~~ 92 (289)
.|.+|.+. ....|++.||+++++.... +........+ .|..+++++++.+.+.+.+. +-.++.+ +.
T Consensus 76 i~~vG~~~G~~l~~~L~~~gV~~~~v~~~~~t~~~~~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 154 (330)
T 2jg1_A 76 SGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQM-MEKVEAVAIS 154 (330)
T ss_dssp EEEEEHHHHHHHHHHHHHTTCEECCEEESSCCEEEEEEEETTEEEEEEECCCBCCHHHHHHHHHHHHHH-GGGCSEEEEE
T ss_pred EEEecchhHHHHHHHHHHCCCceeEEEccCCCeeEEEEEeCCCcEEEECCCCCCCHHHHHHHHHHHHHh-cCCCCEEEEE
Confidence 46677432 3445889999988764321 0001000001 23357777777655443210 0024554 46
Q ss_pred eecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC---CceEEcCCHHHHHHhhCCCCC
Q 022988 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP---VASMLTPNQFEAEQLTGFRIG 169 (289)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~---~~dii~pN~~E~~~L~g~~~~ 169 (289)
|+++.+.+.+.+.++++.+|++ +++++|||+.. .+++ +++ ++|+++||++|++.|+|.+..
T Consensus 155 g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l~~-~l~~~~~~dil~~N~~E~~~l~g~~~~ 218 (330)
T 2jg1_A 155 GSLPKGLNQDYYAQIIERCQNK--GVPVILDCSGA-------------TLQT-VLENPYKPTVIKPNISELYQLLNQPLD 218 (330)
T ss_dssp SCCCBTSCTTHHHHHHHHHHTT--TCCEEEECCHH-------------HHHH-HHTSSSCCSEECCBHHHHHHHTTSCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCcH-------------HHHH-HHhccCCceEEEeCHHHHHHHhCCCCC
Confidence 8877544567788899999987 89999999531 1223 444 899999999999999998655
Q ss_pred -CHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHH
Q 022988 170 -SEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAEL 237 (289)
Q Consensus 170 -~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~ 237 (289)
+.+++.++++.|+++|++.|++|+|+ +|+++..++ .+||+||||+|+|+|+++|.+ |+++++|+++
T Consensus 219 ~~~~~~~~~~~~l~~~g~~~VvvT~G~-~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~-g~~l~~al~~ 296 (330)
T 2jg1_A 219 ESLESLKQAVSQPLFEGIEWIIVSLGA-QGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILN-HENDHDLLKK 296 (330)
T ss_dssp CCHHHHHHHHHSGGGTTCSEEEEECGG-GCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecC-CceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHc-CCCHHHHHHH
Confidence 66788888999988999999999997 888766432 279999999999999999998 9999999999
Q ss_pred HHHHHHHHHHH
Q 022988 238 AVSSLQALLQR 248 (289)
Q Consensus 238 A~a~a~~~l~~ 248 (289)
|+++++.++++
T Consensus 297 A~a~aa~~v~~ 307 (330)
T 2jg1_A 297 ANTLGMLNAQE 307 (330)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHhcC
Confidence 99987655543
No 27
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.89 E-value=1.7e-23 Score=192.84 Aligned_cols=208 Identities=13% Similarity=0.101 Sum_probs=149.5
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC---------CCCCc---ce--eeCCHHHHHH--HHHHHHhCCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT---------GYPTF---KG--QVLNGQQLCD--LIEGLEANNL 84 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t---------g~~~i---~g--~~l~~~~~~~--~~~~l~~~~~ 84 (289)
+.|.+|.|. ....|++.||+++++.... ..+| |...+ .| ..+++++++. ..+.+...++
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~-~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~ 181 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEE-PLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 181 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCT-TCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCC-CCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCE
Confidence 467888775 4455899999998765311 0122 22211 23 3567777754 2344554433
Q ss_pred cccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 85 ~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
+++.|+... .+.+.+.++++.++++ ++++++||.. ..| .+...+.+.+ +++++|+++||+.|++.|+
T Consensus 182 ----v~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~ld~~~----~~~-~~~~~~~l~~-ll~~~dil~~N~~Ea~~l~ 248 (370)
T 3vas_A 182 ----YYIAGFVIN-TCYEGMLKIAKHSLEN--EKLFCFNLSA----PFL-SQFNTKEVDE-MISYSNIVFGNESEAEAYG 248 (370)
T ss_dssp ----EEEEGGGHH-HHHHHHHHHHHHHHHT--TCEEEEECCC----HHH-HHHCHHHHHH-HHTTCSEEEEEHHHHHHHH
T ss_pred ----EEEEeeecc-CCHHHHHHHHHHHHHc--CCEEEEECCc----HHH-HHHHHHHHHH-HHhhCCEEEcCHHHHHHHh
Confidence 234565433 5678889999999988 8999999941 111 1222344444 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-------CCCeEEEeeeecCCcEEEe--cc--------------cCCCCCchHHHHHHHH
Q 022988 165 GFRIGSEADGREACKILHAA-------GPAKVVITSINIDGNLFLI--GS--------------HQKEKGTGDLMTALLL 221 (289)
Q Consensus 165 g~~~~~~~~~~~a~~~L~~~-------g~~~Vvvt~g~~~G~~~~~--~~--------------~~dt~GAGD~f~g~l~ 221 (289)
|....+.++++++++.|.++ |++.|+||+|+ +|++++. ++ .+||+||||+|+|+|+
T Consensus 249 g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~-~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l 327 (370)
T 3vas_A 249 EVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGK-NPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFI 327 (370)
T ss_dssp HHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETT-EEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHH
T ss_pred cccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCC-CceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHH
Confidence 97665667888999999885 89999999997 8887766 32 1589999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHHH
Q 022988 222 GWSNKYRDNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 222 ~~l~~~g~~~~~A~~~A~a~a~~~l~~ 248 (289)
++|.+ |+++++|+++|+++++.++++
T Consensus 328 ~~l~~-g~~l~~a~~~A~aaAa~~v~~ 353 (370)
T 3vas_A 328 ADYIR-GKPMITSLHAAVKAAAYIICR 353 (370)
T ss_dssp HHHTT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHC-CCCHHHHHHHHHHHHHHHHcc
Confidence 99998 999999999999997666543
No 28
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.89 E-value=9.3e-23 Score=184.36 Aligned_cols=203 Identities=16% Similarity=0.113 Sum_probs=144.8
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEEeecCCCC------CC--c--ceeeCCHHHHHHHHHHHHhCCCcccCEEE-
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQFSNHTGY------PT--F--KGQVLNGQQLCDLIEGLEANNLLYYTHLL- 91 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~~~~~tg~------~~--i--~g~~l~~~~~~~~~~~l~~~~~~~~~~v~- 91 (289)
.|.+|.+. ....|++.||+++++.... .+.+++ .. + .|..+++++++.+.+.+.+. +-.++.+.
T Consensus 58 ~~~vG~~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~~~v~~ 135 (323)
T 2f02_A 58 TGVLGGFHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGPTVSPEEISNFLENFDQL-IKQAEIVTI 135 (323)
T ss_dssp EEEEEHHHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCCBCCHHHHHHHHHHHHHH-HTTCSEEEE
T ss_pred EEEeccchHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCCCCCHHHHHHHHHHHHHh-ccCCCEEEE
Confidence 56777532 3445889999998764321 000100 11 1 23457777777655444211 00255544
Q ss_pred EeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhc---CCceEEcCCHHHHHHhhCCCC
Q 022988 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFEAEQLTGFRI 168 (289)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll---~~~dii~pN~~E~~~L~g~~~ 168 (289)
.|+++...+.+.+.++++.++++ +++++|||+.. . +++ ++ +++|+++||++|++.|+|.+.
T Consensus 136 ~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~---------~----~~~-~l~~~~~~dil~~N~~E~~~l~g~~~ 199 (323)
T 2f02_A 136 SGSLAKGLPSDFYQELVQKAHAQ--EVKVLLDTSGD---------S----LRQ-VLQGPWKPYLIKPNLEELEGLLGQDF 199 (323)
T ss_dssp ESCCCBTSCTTHHHHHHHHHHHT--TCEEEEECCTH---------H----HHH-HHHSSCCCSEECCBHHHHHHHHTCCC
T ss_pred ECCCCCCCChHHHHHHHHHHHHC--CCEEEEECChH---------H----HHH-HHhccCCCeEEecCHHHHHHHhCCCC
Confidence 68887655567788889999987 89999999531 1 222 33 689999999999999999865
Q ss_pred C-CH-HHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHH
Q 022988 169 G-SE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAA 235 (289)
Q Consensus 169 ~-~~-~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~ 235 (289)
. +. +++.++++.|+++|++.|++|+|+ +|++++.++ .+||+||||+|+|+|+++|.+ |.++++|+
T Consensus 200 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~-g~~~~~a~ 277 (323)
T 2f02_A 200 SENPLAAVQTALTKPMFAGIEWIVISLGK-DGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAK-DAPAAELL 277 (323)
T ss_dssp CSSCHHHHHHHHTSGGGTTCSEEEEECGG-GCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEeecC-CceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHc-CCCHHHHH
Confidence 4 44 677888888988999999999997 888765432 269999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHH
Q 022988 236 ELAVSSLQALLQR 248 (289)
Q Consensus 236 ~~A~a~a~~~l~~ 248 (289)
++|+++++.+++.
T Consensus 278 ~~A~~~aa~~v~~ 290 (323)
T 2f02_A 278 KWGMAAGMANAQE 290 (323)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC
Confidence 9999997666544
No 29
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.89 E-value=4.2e-24 Score=194.29 Aligned_cols=207 Identities=12% Similarity=0.118 Sum_probs=139.9
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC----------CCCCcc-----ee--eCCHHHHHHHHHHHHhCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTFK-----GQ--VLNGQQLCDLIEGLEANN 83 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t----------g~~~i~-----g~--~l~~~~~~~~~~~l~~~~ 83 (289)
++|.+|.|. ....|++.||+++++.... ...| |...+. +. .++++++.. +.+..
T Consensus 55 ~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~-~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~--~~~~~-- 129 (338)
T 3ljs_A 55 FVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTS-TAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD--ASFSD-- 129 (338)
T ss_dssp EESEEESSHHHHHHHHHHHHHTCBCTTCEEES-SSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH--HHHHT--
T ss_pred EEeeccCCHHHHHHHHHHHHcCCCceeEEEcC-CCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH--hHhcC--
Confidence 468888875 3455899999998775432 1122 222110 11 244445443 22343
Q ss_pred CcccCEEEE-e-ecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccC-ChhHHHHHHHhhcCCceEEcCCHHHH
Q 022988 84 LLYYTHLLT-G-YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEA 160 (289)
Q Consensus 84 ~~~~~~v~~-G-~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~-~~~~~~~l~~~ll~~~dii~pN~~E~ 160 (289)
.+.+.+ | .++++.+.+.+.++++.+|++ +++++|||+++.. +|. .....+.+.+ +++++|+++||++|+
T Consensus 130 ---~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~ 201 (338)
T 3ljs_A 130 ---ALIFHACSNSMTDADIAEVTFEGMRRAQAA--GAIVSFDLNFRPM--LWPNGENPASRLWK-GLSLADVVKLSSEEL 201 (338)
T ss_dssp ---EEEEEEEGGGGSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSCTTCCTHHHHHH-HHHTCSEEEEEHHHH
T ss_pred ---CCEEEECChHhcCchHHHHHHHHHHHHHHc--CCEEEEECCCChh--hcCCHHHHHHHHHH-HHhhCCEEEecHHHH
Confidence 344433 3 366777888999999999988 8999999998753 453 2233444544 889999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCC-
Q 022988 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYR- 228 (289)
Q Consensus 161 ~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g- 228 (289)
+.|+|.+..+. +++++.|+++|++.|+||+|+ +|++++.++ .+||+||||+|+|+|+++|.+ |
T Consensus 202 ~~l~g~~~~~~---~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~-g~ 276 (338)
T 3ljs_A 202 DYLANTLAADA---NAVIQQLWQGRAQLLLVTDAA-GPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQ-QF 276 (338)
T ss_dssp HHHHHHHTSCH---HHHHHHHTTTTCCEEEEEETT-EEEEEEESSCEEEECC-----------CHHHHHHHHHHHHH-HC
T ss_pred HHHhCCCChhH---HHHHHHHHhcCCCEEEEeeCC-CceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHh-CC
Confidence 99998632221 237888888999999999997 888776542 269999999999999999998 8
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHH
Q 022988 229 -------------DNLDIAAELAVSSLQALLQRT 249 (289)
Q Consensus 229 -------------~~~~~A~~~A~a~a~~~l~~~ 249 (289)
.++++|+++|++++..++++.
T Consensus 277 ~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~ 310 (338)
T 3ljs_A 277 DDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQ 310 (338)
T ss_dssp SSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC---
T ss_pred CcccchhccccChHHHHHHHHHHHHHHHHHhCCC
Confidence 899999999999876655443
No 30
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.89 E-value=8.2e-23 Score=184.16 Aligned_cols=203 Identities=13% Similarity=0.078 Sum_probs=140.0
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCC----------CCc---c-----eeeCCHHHHHHHHHHHHhC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY----------PTF---K-----GQVLNGQQLCDLIEGLEAN 82 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~----------~~i---~-----g~~l~~~~~~~~~~~l~~~ 82 (289)
+.|.+|.|. ....|++.||+++++.... ...|+. ..+ . ...+++++++ .+.+...
T Consensus 60 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~ 136 (319)
T 3pl2_A 60 LLSRVGNDPFGEYLLAELERLGVDNQYVATDQ-TFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVS--LDDVREA 136 (319)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEECTTEEEES-SSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSC--HHHHHHC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCccccEEecC-CCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCC--HHHhccC
Confidence 357777765 3455889999988775432 112321 111 0 1134444443 2344544
Q ss_pred CCcccCEEEEeecC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCCh-hHHHHHHHhhcCCceEEcCCHHHH
Q 022988 83 NLLYYTHLLTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPS-ELVSVYREKVVPVASMLTPNQFEA 160 (289)
Q Consensus 83 ~~~~~~~v~~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~-~~~~~l~~~ll~~~dii~pN~~E~ 160 (289)
++ .++.|+.. .+...+.+..+++.+++ +.++++||+++.. +|.++ ...+.+.+ +++++|+++||+.|+
T Consensus 137 ~~----~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~v~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~ 206 (319)
T 3pl2_A 137 DI----LWFTLTGFSEEPSRGTHREILTTRAN---RRHTIFDLDYRPM--FWESPEEATKQAEW-ALQHSTVAVGNKEEC 206 (319)
T ss_dssp SE----EEEEGGGGSSTTHHHHHHHHHHHHTT---CSCEEEECCCCGG--GSSCHHHHHHHHHH-HHTTCSEEEECHHHH
T ss_pred CE----EEEecccccCchhHHHHHHHHHHHHH---CCcEEEeCCCChh--hcCCHHHHHHHHHH-HHHhCCEEEcCHHHH
Confidence 33 23556533 33344566667776654 5678999987653 55433 33444544 899999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCC
Q 022988 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRD 229 (289)
Q Consensus 161 ~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~ 229 (289)
+.|+|. ++..++++.|+++|++.|++|+|+ +|+++...+ .+||+||||+|+|+|+++|.+ |+
T Consensus 207 ~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g~ 279 (319)
T 3pl2_A 207 EIAVGE-----TEPERAGRALLERGVELAIVKQGP-KGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLS-EW 279 (319)
T ss_dssp HHHHSC-----CSHHHHHHHHHHTTCSEEEEEEET-TEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT-TC
T ss_pred HHHcCC-----CCHHHHHHHHHhcCCCEEEEEECC-CCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHc-CC
Confidence 999997 356778889999999999999997 888766532 269999999999999999998 99
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 022988 230 NLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 230 ~~~~A~~~A~a~a~~~l~ 247 (289)
++++|+++|+++++.+++
T Consensus 280 ~~~~a~~~A~~~aa~~v~ 297 (319)
T 3pl2_A 280 PLEKVLRFANTAGALVAS 297 (319)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999998765553
No 31
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.89 E-value=2.4e-23 Score=190.01 Aligned_cols=208 Identities=15% Similarity=0.220 Sum_probs=146.1
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCC---------CCc---ce--eeCCHHHHHH--HHHHHHhCCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY---------PTF---KG--QVLNGQQLCD--LIEGLEANNL 84 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~---------~~i---~g--~~l~~~~~~~--~~~~l~~~~~ 84 (289)
++|.+|.|. ....|++.||+++++... ..+|+. ..+ .| ..+++++++. ..+.+...++
T Consensus 88 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~--~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 88 YVGCIADDRYGKVLKEAAEHEGIVMAVEHTT--KAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EECEECSSHHHHHHHHHHHHHTCEECCEECS--SSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEecCChHHHHHHHHHHHCCCceecccCC--CCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 568888875 445589999999876421 112321 111 11 2466777653 2344555443
Q ss_pred cccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 85 ~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
.++.|+.+. .+.+.+.++++.+|++ ++++++||.. .+..+...+.+.+ +++++|+++||+.|++.|+
T Consensus 166 ----~~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~~-----~~~~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~ 232 (347)
T 3otx_A 166 ----FYFSGFTLT-VDVNHVLQACRKAREV--DGLFMINLSA-----PFIMQFFSAQLGE-VLPYTDIIVANRHEAKEFA 232 (347)
T ss_dssp ----EEEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECCC-----HHHHHHCHHHHHH-HGGGCSEEEEEHHHHHHHH
T ss_pred ----EEEeeeecc-cCHHHHHHHHHHHHHh--CCEEEeeCch-----hhhHHHHHHHHHH-HHhhCCEEecCHHHHHHHh
Confidence 235566543 4467888999999988 8899999941 1111222344544 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHH------hcCCCeEEEeeeecCCcEEEecc--------------cCCCCCchHHHHHHHHHHH
Q 022988 165 GFRIGSEADGREACKILH------AAGPAKVVITSINIDGNLFLIGS--------------HQKEKGTGDLMTALLLGWS 224 (289)
Q Consensus 165 g~~~~~~~~~~~a~~~L~------~~g~~~Vvvt~g~~~G~~~~~~~--------------~~dt~GAGD~f~g~l~~~l 224 (289)
|....+.++.+++++.|. +.|++.|+||+|+ +|+++...+ .+||+||||+|+|+|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~-~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l 311 (347)
T 3otx_A 233 NMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDI-ESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAY 311 (347)
T ss_dssp HHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETT-EEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHH
T ss_pred cccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCC-CCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHH
Confidence 764333456778888887 4789999999997 887765431 2699999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHH
Q 022988 225 NKYRDNLDIAAELAVSSLQALLQRT 249 (289)
Q Consensus 225 ~~~g~~~~~A~~~A~a~a~~~l~~~ 249 (289)
.+ |+++++|+++|+++++.++++.
T Consensus 312 ~~-g~~l~~a~~~a~~~aa~~v~~~ 335 (347)
T 3otx_A 312 AV-GKDLRRCCETGHYTAQEVIQRD 335 (347)
T ss_dssp TT-TCCHHHHHHHHHHHHHHHHTCC
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHccc
Confidence 98 9999999999999976666443
No 32
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.89 E-value=4.9e-23 Score=189.38 Aligned_cols=208 Identities=18% Similarity=0.193 Sum_probs=146.3
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCC---------c---ce--eeCCHHHHHH--HHHHHHhCCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPT---------F---KG--QVLNGQQLCD--LIEGLEANNL 84 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~---------i---~g--~~l~~~~~~~--~~~~l~~~~~ 84 (289)
++|.+|.|. ....|++.||+++++... ..+||... + .| ..+++++++. ..+.+...++
T Consensus 102 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~--~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T 3loo_A 102 FFGCVGQDEYARILEERATSNGVNVQYQRSA--TSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQF 179 (365)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTCEEEEEEES--SSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSE
T ss_pred EEEEecCCchHHHHHHHHHHCCCceeccccC--CCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCE
Confidence 467888875 345589999999877541 12343211 1 11 1455555532 2344554333
Q ss_pred cccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 85 ~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
+++.|++.. .+.+.+.++++.++++ ++++++||. +..| .+...+.+.+ +++++|+++||+.|++.|+
T Consensus 180 ----v~i~G~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~----~~~~-~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~ 246 (365)
T 3loo_A 180 ----FYVSGFFFT-VSFESALSVAKEAAAT--GRMFMMNLS----APFV-PQFYKNNLEE-IFPYVDVLFGNETEAIALA 246 (365)
T ss_dssp ----EEEEGGGHH-HHHHHHHHHHHHHHHT--TCEEEEECC----STHH-HHHCHHHHHH-HGGGCSEEEEEHHHHHHHH
T ss_pred ----EEEeeeecc-CCHHHHHHHHHHHHHc--CCEEEEECC----chhh-hHHHHHHHHH-HHHhCCEEecCHHHHHHHh
Confidence 235566543 4567888999999988 899999983 1111 1222344544 7899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc------CCCeEEEeeeecCCcEEE--ecc--------------cCCCCCchHHHHHHHHH
Q 022988 165 GFRIGSEADGREACKILHAA------GPAKVVITSINIDGNLFL--IGS--------------HQKEKGTGDLMTALLLG 222 (289)
Q Consensus 165 g~~~~~~~~~~~a~~~L~~~------g~~~Vvvt~g~~~G~~~~--~~~--------------~~dt~GAGD~f~g~l~~ 222 (289)
|....+.++++++++.|.++ |++.|+||+|+ +|+++. .++ .+||+||||+|+|+|++
T Consensus 247 g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~-~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~ 325 (365)
T 3loo_A 247 KEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGS-DPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLA 325 (365)
T ss_dssp HHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETT-EEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCC-CCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHH
Confidence 86554556788889998875 88999999997 888877 321 16899999999999999
Q ss_pred HHccCCCCHHHHHHHHHHHHHHHHHHH
Q 022988 223 WSNKYRDNLDIAAELAVSSLQALLQRT 249 (289)
Q Consensus 223 ~l~~~g~~~~~A~~~A~a~a~~~l~~~ 249 (289)
+|.+ |+++++|+++|+++++.++++.
T Consensus 326 ~l~~-g~~l~~a~~~a~~~Aa~~v~~~ 351 (365)
T 3loo_A 326 QLLQ-SRTVDVCIKCGIWAAREIIQRS 351 (365)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHC-CCCHHHHHHHHHHHHHHHHcCC
Confidence 9998 9999999999999987777654
No 33
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.89 E-value=1.7e-22 Score=185.03 Aligned_cols=125 Identities=22% Similarity=0.223 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 022988 103 TILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILH 182 (289)
Q Consensus 103 ~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~a~~~L~ 182 (289)
.+.++++.++++ ++++++||++. .| .+++++|+++||+.|++.|+| ...+.+++.+++++|+
T Consensus 202 ~~~~~~~~a~~~--g~~v~~D~~~~----~~-----------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~ 263 (352)
T 4e84_A 202 HVTTMIEKARAA--GKAVLVDPKGD----DW-----------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLR 263 (352)
T ss_dssp SHHHHHHHHHHT--TCEEEEECCSS----CC-----------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc--CCEEEEECCCc----ch-----------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHH
Confidence 367788889887 89999999653 22 378899999999999999999 5667788889999998
Q ss_pred h-cCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Q 022988 183 A-AGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 183 ~-~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~ 247 (289)
+ .|++.|+||+|+ +|+++..++ .+||+||||+|+|+|+++|.+ |.++++|+++|++++..+++
T Consensus 264 ~~~g~~~VvvT~G~-~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~-g~~l~~al~~A~aaaa~~v~ 338 (352)
T 4e84_A 264 AELDIDALLLTRSE-EGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGA-GVPLVDAVVLANRAAGIVVG 338 (352)
T ss_dssp HHHTCSEEEEECGG-GCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCEEEEEcCC-CcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 5 799999999997 898776542 279999999999999999998 99999999999998755553
No 34
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.88 E-value=1.4e-22 Score=180.70 Aligned_cols=150 Identities=18% Similarity=0.171 Sum_probs=118.6
Q ss_pred cCEEEEeecC--CHhHHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHh
Q 022988 87 YTHLLTGYIG--SVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (289)
Q Consensus 87 ~~~v~~G~l~--~~~~~~~~~~~l~~~k~-~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L 163 (289)
++.+.+|.++ .+.+.+.+.++++.+++ + +.++++||+++.. .| .. +.+.+ +++++|+++||+.|++.|
T Consensus 115 ~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~--~~~v~~D~~~~~~--~~-~~---~~~~~-~l~~~dil~~N~~E~~~l 185 (296)
T 2qhp_A 115 TRAVCFGSLAQRNEVSRATINRFLDTMPDID--GQLKIFDINLRQD--FY-TK---EVLRE-SFKRCNILKINDEELVTI 185 (296)
T ss_dssp EEEEEECSGGGSSHHHHHHHHHHHHHSCCTT--SCEEEEECCCCTT--CC-CH---HHHHH-HHHHCSEEEEEHHHHHHH
T ss_pred CCEEEECChHhcChHHHHHHHHHHHHHHhcC--CCEEEEECcCCcc--cc-CH---HHHHH-HHHHCCEEECCHHHHHHH
Confidence 5667777654 45567888888888876 5 7899999988743 23 22 23333 788999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhc-CCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCH
Q 022988 164 TGFRIGSEADGREACKILHAA-GPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNL 231 (289)
Q Consensus 164 ~g~~~~~~~~~~~a~~~L~~~-g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~ 231 (289)
+|....+.++.++++++|+++ |++.|++|+|+ +|++++.++ .+||+||||+|+|+|++++.+ |.++
T Consensus 186 ~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~-g~~~ 263 (296)
T 2qhp_A 186 SRMFGYPGIDLQDKCWILLAKYNLKMLILTCGI-NGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILN-GKSV 263 (296)
T ss_dssp HHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGG-GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHH-TCCH
T ss_pred hcccCCCCCCHHHHHHHHHHhcCCCEEEEeecC-CCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHc-CCCH
Confidence 986544445677888888875 99999999997 888765432 269999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHH
Q 022988 232 DIAAELAVSSLQALLQ 247 (289)
Q Consensus 232 ~~A~~~A~a~a~~~l~ 247 (289)
++|+++|+++++.+++
T Consensus 264 ~~a~~~a~~~aa~~v~ 279 (296)
T 2qhp_A 264 PEAHKLAVEVSAYVCT 279 (296)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999998766554
No 35
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.88 E-value=3.8e-22 Score=179.91 Aligned_cols=198 Identities=12% Similarity=0.120 Sum_probs=141.2
Q ss_pred cCccchhh---cHHHHHhCCCcceee-ceEE-------eecCCCC--CCc---ceeeCCHHHHHHHHHHHHhCCCcccCE
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPI-HSVQ-------FSNHTGY--PTF---KGQVLNGQQLCDLIEGLEANNLLYYTH 89 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v-~~~~-------~~~~tg~--~~i---~g~~l~~~~~~~~~~~l~~~~~~~~~~ 89 (289)
.|.+|.|. ....|++.||+++++ .... +.. .|. ..+ .|..+++++++.+++.+.+.. -.++.
T Consensus 59 i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 136 (320)
T 3ie7_A 59 LGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGFTVSQTNKDNLLKQIAKKV-KKEDM 136 (320)
T ss_dssp EEEEESTTHHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCCCCCHHHHHHHHHHHHHHC-CTTCE
T ss_pred EEEecCchHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCCE
Confidence 56777653 345589999999887 2210 011 222 211 345678888887766654321 13566
Q ss_pred EEE-eecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCC
Q 022988 90 LLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (289)
Q Consensus 90 v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~ 168 (289)
+.+ |+++...+.+.+.++++.+|++ ++++++||++. .+.+.+.+++|+++||+.|++.|+|.+.
T Consensus 137 v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l~~~l~~~~dil~~N~~E~~~l~g~~~ 201 (320)
T 3ie7_A 137 VVIAGSPPPHYTLSDFKELLRTVKAT--GAFLGCDNSGE-------------YLNLAVEMGVDFIKPNEDEVIAILDEKT 201 (320)
T ss_dssp EEEESCCCTTCCHHHHHHHHHHHHHH--TCEEEEECCHH-------------HHHHHHHHCCSEECCBTTGGGGGSCTTC
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHHhc--CCEEEEECChH-------------HHHHHHhcCCeEEeeCHHHHHHHhCCCc
Confidence 554 8887766678899999999988 89999999532 1223222489999999999999999865
Q ss_pred C-CHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHH
Q 022988 169 G-SEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAE 236 (289)
Q Consensus 169 ~-~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~ 236 (289)
. +.+++ +++.+. ++.|++|+|+ +|+++..++ .+||+||||+|+|+|+++|.+ |+++++|++
T Consensus 202 ~~~~~~~----~~~~~~-~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~-g~~~~~a~~ 274 (320)
T 3ie7_A 202 NSLEENI----RTLAEK-IPYLVVSLGA-KGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAM-NMPITETLK 274 (320)
T ss_dssp CCHHHHH----HHHTTT-CSEEEEECGG-GCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHH
T ss_pred CCCHHHH----HHHHhh-CCEEEEEcCC-CceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHc-CCCHHHHHH
Confidence 4 23333 333333 8899999997 888776542 269999999999999999998 999999999
Q ss_pred HHHHHHHHHHH
Q 022988 237 LAVSSLQALLQ 247 (289)
Q Consensus 237 ~A~a~a~~~l~ 247 (289)
+|+++++.+++
T Consensus 275 ~A~a~aa~~v~ 285 (320)
T 3ie7_A 275 VATGCSASKVM 285 (320)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999766654
No 36
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.88 E-value=2.1e-22 Score=185.67 Aligned_cols=209 Identities=13% Similarity=0.110 Sum_probs=145.9
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC---------CCCCc---ce--eeCCHHHHHH--HHHHHHhCCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT---------GYPTF---KG--QVLNGQQLCD--LIEGLEANNL 84 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t---------g~~~i---~g--~~l~~~~~~~--~~~~l~~~~~ 84 (289)
++|++|+|. ....|++.||++.++.... ..+| +.+.+ .| ..+++++++. ..+.+....+
T Consensus 105 fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~-~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~ 183 (372)
T 3uq6_A 105 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEE-PLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 183 (372)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCT-TCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEeeecCCHHHHHHHHHHHHcCCCceeeeecC-CCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccE
Confidence 468888886 3445899999998764321 0122 21111 11 2466666643 2344555443
Q ss_pred cccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 85 ~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
+ .+.|++. ....+.+.++++.++++ ++++++|++.. +..+...+.+.+ +++++|+++||+.|++.|+
T Consensus 184 ~----~~~g~~~-~~~~~~~~~~~~~a~~~--g~~v~ldls~~-----~~~~~~~~~l~~-ll~~~Dil~~Ne~Ea~~l~ 250 (372)
T 3uq6_A 184 Y----YIAGFVI-NTCYEGMLKIAKHSLEN--EKLFCFNLSAP-----FLSQFNTKEVDE-MISYSNIVFGNESEAEAYG 250 (372)
T ss_dssp E----EEEGGGH-HHHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHH
T ss_pred E----EEecccc-cccHHHHHHHHHHHHHc--CCeEeeccccc-----hhhhhhHHHHHH-HhhcCCcccCCHHHHHHHh
Confidence 2 3556553 34567888899999998 99999998421 111122333444 7899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh-------cCCCeEEEeeeecCCcEEEecc----------------cCCCCCchHHHHHHHH
Q 022988 165 GFRIGSEADGREACKILHA-------AGPAKVVITSINIDGNLFLIGS----------------HQKEKGTGDLMTALLL 221 (289)
Q Consensus 165 g~~~~~~~~~~~a~~~L~~-------~g~~~Vvvt~g~~~G~~~~~~~----------------~~dt~GAGD~f~g~l~ 221 (289)
+......++.+++++.+.+ .+++.|++|+|+ +|+++..+. .+|||||||+|+|+|+
T Consensus 251 ~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~-~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl 329 (372)
T 3uq6_A 251 EVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGK-NPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFI 329 (372)
T ss_dssp HHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETT-EEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHH
T ss_pred CCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCC-CceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHH
Confidence 8655445677777877765 356789999997 888776532 1699999999999999
Q ss_pred HHHccCCCCHHHHHHHHHHHHHHHHHHH
Q 022988 222 GWSNKYRDNLDIAAELAVSSLQALLQRT 249 (289)
Q Consensus 222 ~~l~~~g~~~~~A~~~A~a~a~~~l~~~ 249 (289)
++|.+ |+++++|+++|+.+++.++++.
T Consensus 330 ~~l~~-g~~l~~a~~~a~~aAa~vv~~~ 356 (372)
T 3uq6_A 330 ADYIR-GKPMITSLHAAVKAAAYIICRS 356 (372)
T ss_dssp HHHTT-TCCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHcCC
Confidence 99998 9999999999999987777543
No 37
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.87 E-value=9.1e-24 Score=191.31 Aligned_cols=205 Identities=15% Similarity=0.143 Sum_probs=136.6
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCC---------CCCc---ce--eeCCHHHHHHHHHHHHhCCCcc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG---------YPTF---KG--QVLNGQQLCDLIEGLEANNLLY 86 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg---------~~~i---~g--~~l~~~~~~~~~~~l~~~~~~~ 86 (289)
++|.+|.|. ....|++.||+++++.... ...|+ ...+ .+ ..++++++.. +.+.+
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~~--~~~~~----- 144 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDK-ERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIF--ELIKR----- 144 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEES-SSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCHH--HHHC------
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcC-CCCceEEEEEecCCCccEEEecChhhhCChhhcCH--hHhcc-----
Confidence 357778764 3445889999988775332 12222 1111 01 1222222221 12333
Q ss_pred cCEEE-Eee-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccC-ChhHHHHHHHhhcCCceEEcCCHHHHHHh
Q 022988 87 YTHLL-TGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAEQL 163 (289)
Q Consensus 87 ~~~v~-~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~-~~~~~~~l~~~ll~~~dii~pN~~E~~~L 163 (289)
.+.+. .|+ ++.+.+.+.+.++++.+|++ +++++|||+++.. +|. .++..+.+.+ +++++|+++||+.|++.|
T Consensus 145 ~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l 219 (327)
T 3hj6_A 145 SKVFHLSTFILSRKPARDTAIKAFNYAREQ--GKIVCFDPCYRKV--LWPEGDDGAGVVEE-IISRADFVKPSLDDARHL 219 (327)
T ss_dssp -CEEEEESHHHHSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSCSSSCSHHHHHH-HHTTCSEECCBHHHHHHH
T ss_pred CCEEEECchHhcCchhHHHHHHHHHHHHHC--CCEEEEECCCchh--hcCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 34443 443 44555678889999999988 8999999987642 342 2233444544 889999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHH
Q 022988 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLD 232 (289)
Q Consensus 164 ~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~ 232 (289)
+|.. +.+++++.|+++|++.|+||+|+ +|++++.++ .+||+||||+|+|+|+++|.+ |++++
T Consensus 220 ~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~-g~~~~ 292 (327)
T 3hj6_A 220 FGPD-----SPENYVKRYLELGVKAVILTLGE-EGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLD-GYTVK 292 (327)
T ss_dssp HTTS-----CSSGGGGGGTTTTCSEEEEECST-TCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSS-CSTTH
T ss_pred hCCC-----CHHHHHHHHHhCCCCEEEEEECC-CceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHc-CCCHH
Confidence 9972 33456777888899999999997 898876542 169999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022988 233 IAAELAVSSLQALLQRT 249 (289)
Q Consensus 233 ~A~~~A~a~a~~~l~~~ 249 (289)
+|+++|+++++.++++.
T Consensus 293 ~a~~~A~a~aa~~v~~~ 309 (327)
T 3hj6_A 293 RSIKLGNGVAAFKIRGV 309 (327)
T ss_dssp HHHHHHHCCCSSCC---
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 99999999876655543
No 38
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.87 E-value=2.8e-22 Score=181.30 Aligned_cols=199 Identities=18% Similarity=0.183 Sum_probs=136.7
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCCc----cee------------eCCHHHHHHHHHHHHhCCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF----KGQ------------VLNGQQLCDLIEGLEANNL 84 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i----~g~------------~l~~~~~~~~~~~l~~~~~ 84 (289)
++|.+|.|. ....|++.||+++++.... ..+|+...+ .|. .++.++++ .+.+..
T Consensus 62 ~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~-~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~--- 135 (325)
T 3h49_A 62 LMSRIGKDAAGQFILDHCRKENIDIQSLKQDV-SIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVD--FARFSQ--- 135 (325)
T ss_dssp EECEEESSHHHHHHHHHHHHHTCBCSSCEEET-TSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCC--GGGGGG---
T ss_pred EEEEECCChHHHHHHHHHHHcCCceeeEEecC-CCCCceEEEEECCCCceeEEeccCcccccCChhhcC--hhhhcc---
Confidence 468888875 3455899999998775432 123332110 111 12222211 011222
Q ss_pred cccCE-EEEeecCCH-hHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHH
Q 022988 85 LYYTH-LLTGYIGSV-SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (289)
Q Consensus 85 ~~~~~-v~~G~l~~~-~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~ 162 (289)
.+. .+.|++..+ ...+.+.++++.++++ + .+++||++++. +|.. .+.+.+ +++++|+++||+.|++.
T Consensus 136 --~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~--~-~~~~d~~~~~~--~~~~---~~~~~~-~l~~~dil~~N~~E~~~ 204 (325)
T 3h49_A 136 --AKLLSLASIFNSPLLDGKALTEIFTQAKAR--Q-MIICADMIKPR--LNET---LDDICE-ALSYVDYLFPNFAEAKL 204 (325)
T ss_dssp --CSEEEEEEETTSTTSCHHHHHHHHHHHHHT--T-CEEEEEECCCS--SCCC---HHHHHH-HHTTCSEEECBHHHHHH
T ss_pred --CCEEEEecccCCcccCHHHHHHHHHHHHhc--C-CEEEecCCchh--hhhH---HHHHHH-HHhhCCEEecCHHHHHH
Confidence 343 345654332 2356788899999987 6 68888877643 2221 233444 78999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHccCCCC
Q 022988 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNKYRDN 230 (289)
Q Consensus 163 L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~~g~~ 230 (289)
|+|.+ +.+++++.|.++|++.|+||+|+ +|+++...+ .+||+||||+|+|+|+++|.+ |++
T Consensus 205 l~g~~-----~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~-g~~ 277 (325)
T 3h49_A 205 LTGKE-----TLDEIADCFLACGVKTVVIKTGK-DGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLE-GKN 277 (325)
T ss_dssp HHTCS-----SHHHHHHHHHTTTCSEEEEECTT-SCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHT-TCC
T ss_pred HhCCC-----CHHHHHHHHHHcCCCEEEEEeCC-CCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHc-CCC
Confidence 99973 45677888989999999999997 888766432 268999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022988 231 LDIAAELAVSSLQALLQ 247 (289)
Q Consensus 231 ~~~A~~~A~a~a~~~l~ 247 (289)
+++|+++|++++..+++
T Consensus 278 ~~~a~~~A~~~aa~~v~ 294 (325)
T 3h49_A 278 LRECARFANATAAISVL 294 (325)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999998655553
No 39
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.87 E-value=2.4e-22 Score=180.35 Aligned_cols=197 Identities=21% Similarity=0.166 Sum_probs=137.6
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCC----------Cc-------ceeeCCHHHHHHHHHHHHhCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP----------TF-------KGQVLNGQQLCDLIEGLEANN 83 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~----------~i-------~g~~l~~~~~~~~~~~l~~~~ 83 (289)
+.|.+|.|. ....|++.||+++++.... . .|+.. .+ ....++++++.. +.+.
T Consensus 52 ~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~-~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~--- 124 (309)
T 1v1a_A 52 FVGRVGEDELGAMVEERLRAEGVDLTHFRRAP-G-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP--DYLE--- 124 (309)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCBCTTEEECS-S-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG--GGGT---
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCCceEEEcC-C-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh--hHhc---
Confidence 357788775 3445889999988765322 1 23211 11 011233333221 1122
Q ss_pred CcccCEE-EEeecC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHH
Q 022988 84 LLYYTHL-LTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEA 160 (289)
Q Consensus 84 ~~~~~~v-~~G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~ 160 (289)
.++.+ +.|+.+ ++.+.+.+.++++.++++ +++++|||+++.. +|..++..+.+.+ +++++|+++||+.|+
T Consensus 125 --~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~l~~~dil~~N~~E~ 197 (309)
T 1v1a_A 125 --GVRFLHLSGITPALSPEARAFSLWAMEEAKRR--GVRVSLDVNYRQT--LWSPEEARGFLER-ALPGVDLLFLSEEEA 197 (309)
T ss_dssp --TCSEEEEETTGGGSCHHHHHHHHHHHHHHHTT--TCEEEEECCCCTT--TSCHHHHHHHHHH-HGGGCSEEEEEHHHH
T ss_pred --CCCEEEEeCchhccCchHHHHHHHHHHHHHHc--CCEEEEeCCCCcc--cCCHHHHHHHHHH-HHHhCCEEECcHHHH
Confidence 25554 456654 466678889999999987 8999999998753 4432334455544 899999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEec-c-----------cCCCCCchHHHHHHHHHHHccCC
Q 022988 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIG-S-----------HQKEKGTGDLMTALLLGWSNKYR 228 (289)
Q Consensus 161 ~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~-~-----------~~dt~GAGD~f~g~l~~~l~~~g 228 (289)
+.|+|.+ +++++ ++|++.|+||+|+ +|+++ .. + .+||+||||+|+|+|+++|.+ |
T Consensus 198 ~~l~g~~-------~~~~~---~~g~~~vvvt~G~-~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g 264 (309)
T 1v1a_A 198 ELLFGRV-------EEALR---ALSAPEVVLKRGA-KGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVW-G 264 (309)
T ss_dssp HHHHSSH-------HHHHH---HTCCSEEEEECGG-GCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHT-T
T ss_pred HHHhCCH-------HHHHH---hcCCCEEEEEecC-CCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHc-C
Confidence 9999962 34444 6799999999997 88876 43 2 168999999999999999998 9
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 022988 229 DNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 229 ~~~~~A~~~A~a~a~~~l~~ 248 (289)
+++++|+++|+++++.++++
T Consensus 265 ~~~~~a~~~a~~~aa~~v~~ 284 (309)
T 1v1a_A 265 LPVEERLRLANLLGASVAAS 284 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHcC
Confidence 99999999999997666544
No 40
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.87 E-value=1.6e-22 Score=185.11 Aligned_cols=200 Identities=16% Similarity=0.146 Sum_probs=140.8
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC----------CCCCc---ce--eeCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTF---KG--QVLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t----------g~~~i---~g--~~l~~~~~~~~~~~l~~~~~~ 85 (289)
++|.+|.|. ....|++.||+++++.... ..+| |...+ .| ..++++++.. +.+...++
T Consensus 99 ~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~-~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~--~~~~~~~~- 174 (352)
T 4e3a_A 99 YFGNVAADQLGDIFTHDIRAQGVHYQTKPKGA-FPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA--DVVADAKV- 174 (352)
T ss_dssp EECCCCSSHHHHHHHHHHHHTTCEECCCCCCS-SSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH--HHHHTEEE-
T ss_pred EEEEECCChHHHHHHHHHHHcCCccceeeccC-CCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH--HHHhhCCE-
Confidence 468888775 4455899999998775321 0122 22111 11 2345555442 23443322
Q ss_pred ccCEEEEeecC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC--CceEEcCCHHHHHH
Q 022988 86 YYTHLLTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQ 162 (289)
Q Consensus 86 ~~~~v~~G~l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~--~~dii~pN~~E~~~ 162 (289)
+++.|++. ++.+.+.+.++++.+|++ ++++++||... +..+...+.+.+ +++ ++|+++||+.|++.
T Consensus 175 ---v~~~G~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-----~~~~~~~~~l~~-ll~~~~~dil~~N~~Ea~~ 243 (352)
T 4e3a_A 175 ---TYFEGYLWDPPRAKEAILDCARIAHQH--GREMSMTLSDS-----FCVDRYRGEFLD-LMRSGKVDIVFANRQEALS 243 (352)
T ss_dssp ---EEEEGGGGSSSSHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHHHHHHHH-HHHTTSCCEEEEEHHHHHH
T ss_pred ---EEEeeeecCCchHHHHHHHHHHHHHHc--CCEEEEECCch-----hhHHHHHHHHHH-HhcccCCcEEEeCHHHHHH
Confidence 24667764 445678889999999988 89999999421 122233444544 777 89999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHccCCCC
Q 022988 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNKYRDN 230 (289)
Q Consensus 163 L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~~g~~ 230 (289)
|+|. ++.+++++.|.+ +++.|+||.|+ +|+++..++ .+||+||||+|+|+|+++|.+ |++
T Consensus 244 l~g~-----~~~~~a~~~l~~-~~~~vvvT~G~-~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~-g~~ 315 (352)
T 4e3a_A 244 LYQT-----DDFEEALNRIAA-DCKIAAVTMSE-NGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQ-GRS 315 (352)
T ss_dssp HTTC-----SCHHHHHHHHHH-HSSEEEEECGG-GCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHT-TCC
T ss_pred HhCC-----CCHHHHHHHHhc-CCCEEEEEECC-CceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHc-CCC
Confidence 9996 345667777765 68999999997 888766432 268999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022988 231 LDIAAELAVSSLQALLQ 247 (289)
Q Consensus 231 ~~~A~~~A~a~a~~~l~ 247 (289)
+++|+++|+++++.+++
T Consensus 316 l~~a~~~A~~aAa~~v~ 332 (352)
T 4e3a_A 316 LEDCGKLGCLAAGIVIQ 332 (352)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999766554
No 41
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=4.1e-22 Score=179.68 Aligned_cols=197 Identities=17% Similarity=0.108 Sum_probs=134.7
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCC----------CCc---c-e--eeCCHHHHHHHH--HHHHhC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY----------PTF---K-G--QVLNGQQLCDLI--EGLEAN 82 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~----------~~i---~-g--~~l~~~~~~~~~--~~l~~~ 82 (289)
+.|.+|.|. ....|++.||+++++. .. ..+|+. ..+ . + ..+++++++... +.+..
T Consensus 58 ~i~~vG~D~~G~~l~~~L~~~gV~~~~~~-~~-~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 134 (317)
T 2nwh_A 58 IIAPRGGDVTGEVVAEAARQAGVEDTPFT-FL-DRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA- 134 (317)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCEECCEE-ET-TSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH-
T ss_pred EEEeecCCchHHHHHHHHHHcCCCCCCcc-cC-CCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc-
Confidence 367888776 3345889999988732 11 113331 111 0 1 235665554333 34443
Q ss_pred CCcccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHH
Q 022988 83 NLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (289)
Q Consensus 83 ~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~ 162 (289)
.+.+.++. ..+.+.+.++++.++++ +++++|||+.. + ..+.+. .+++++|+++||+.|++.
T Consensus 135 ----~~~v~~~~---~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~-----~----~~~~~~-~ll~~~dil~~N~~E~~~ 195 (317)
T 2nwh_A 135 ----SDFLLCDA---NLPEDTLTALGLIARAC--EKPLAAIAISP-----A----KAVKLK-AALGDIDILFMNEAEARA 195 (317)
T ss_dssp ----CSEEEEET---TSCHHHHHHHHHHHHHT--TCCEEEECCSH-----H----HHGGGT-TTGGGCSEEEEEHHHHHH
T ss_pred ----CCEEEEeC---CCCHHHHHHHHHHHHhc--CCeEEEeCCCH-----H----HHHHHH-HHhhhCeEecCCHHHHHH
Confidence 34444431 12356778888999887 89999999631 1 111222 478899999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHccCCCC
Q 022988 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNKYRDN 230 (289)
Q Consensus 163 L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~~g~~ 230 (289)
|+|. +.+++.++++.|+++|++.|++|+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |++
T Consensus 196 l~g~---~~~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~-g~~ 270 (317)
T 2nwh_A 196 LTGE---TAENVRDWPNILRKAGLSGGVVTRGA-SEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAE-GKT 270 (317)
T ss_dssp HHC--------CTTHHHHHHHTTCCCEEEEETT-TEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHT-TCC
T ss_pred HhCC---ChhHHHHHHHHHHHcCCCEEEEEECC-CcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHc-CCC
Confidence 9996 23455677888888999999999997 787765421 268999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 022988 231 LDIAAELAVSSLQALLQR 248 (289)
Q Consensus 231 ~~~A~~~A~a~a~~~l~~ 248 (289)
+++|+++|+++++.++++
T Consensus 271 ~~~a~~~A~~~aa~~v~~ 288 (317)
T 2nwh_A 271 IREALRQGAAAAAITVQS 288 (317)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999997666643
No 42
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.87 E-value=1.7e-22 Score=184.03 Aligned_cols=205 Identities=15% Similarity=0.103 Sum_probs=142.2
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCC---------c---ce--eeCCHH-HHH--HHHHHHHhCC
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPT---------F---KG--QVLNGQ-QLC--DLIEGLEANN 83 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~---------i---~g--~~l~~~-~~~--~~~~~l~~~~ 83 (289)
+.|.+|.|. ....|++.||+++++... ..+|+... + .+ ..++++ +++ ...+.+..
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~--~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-- 161 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQN--EQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEK-- 161 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEES--SSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHH--
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecC--CCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhh--
Confidence 356777775 345589999999887521 12444211 1 01 124444 443 22333443
Q ss_pred CcccCEE-EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHH
Q 022988 84 LLYYTHL-LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (289)
Q Consensus 84 ~~~~~~v-~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~ 162 (289)
.+.+ +.|+.+. .+.+.+.++++.++++ ++++++||.. ..| .+...+.+.+ +++++|+++||+.|++.
T Consensus 162 ---~~~v~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~~----~~~-~~~~~~~~~~-~l~~~dil~~N~~E~~~ 229 (345)
T 1bx4_A 162 ---ARVCYIAGFFLT-VSPESVLKVAHHASEN--NRIFTLNLSA----PFI-SQFYKESLMK-VMPYVDILFGNETEAAT 229 (345)
T ss_dssp ---CSEEEEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECCS----HHH-HHHTHHHHHH-HGGGCSEEEEEHHHHHH
T ss_pred ---CCEEEEEEEecc-CCHHHHHHHHHHHHHc--CCEEEEeCCc----HHH-HHHHHHHHHH-HhccCCEEeCCHHHHHH
Confidence 3444 4465442 4567888899999987 8899999942 122 2223344544 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHh------cCCCeEEEeeeecCCcEEEecc--------------cCCCCCchHHHHHHHHH
Q 022988 163 LTGFRIGSEADGREACKILHA------AGPAKVVITSINIDGNLFLIGS--------------HQKEKGTGDLMTALLLG 222 (289)
Q Consensus 163 L~g~~~~~~~~~~~a~~~L~~------~g~~~Vvvt~g~~~G~~~~~~~--------------~~dt~GAGD~f~g~l~~ 222 (289)
|+|....+.+++++++++|++ +|++.|++|+|+ +|++++..+ .+||+||||+|+|+|++
T Consensus 230 l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~ 308 (345)
T 1bx4_A 230 FAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGR-DDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLS 308 (345)
T ss_dssp HHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETT-EEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHH
T ss_pred HhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCC-CCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHH
Confidence 998654344567888899988 599999999997 777654321 25899999999999999
Q ss_pred HHccCCCCHHHHHHHHHHHHHHHHH
Q 022988 223 WSNKYRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 223 ~l~~~g~~~~~A~~~A~a~a~~~l~ 247 (289)
+|.+ |+++++|+++|+++++.+++
T Consensus 309 ~l~~-g~~~~~a~~~A~~~aa~~v~ 332 (345)
T 1bx4_A 309 QLVS-DKPLTECIRAGHYAASIIIR 332 (345)
T ss_dssp HHTT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 9998 99999999999998766553
No 43
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.86 E-value=4.1e-22 Score=179.21 Aligned_cols=200 Identities=14% Similarity=0.182 Sum_probs=138.0
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCC------------CCc-------ceeeCCHHHHHHHHHHHHh
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY------------PTF-------KGQVLNGQQLCDLIEGLEA 81 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~------------~~i-------~g~~l~~~~~~~~~~~l~~ 81 (289)
+.|.+|.|. ....|++.||+++++.... ..+|+. ..+ ....++++++.. +.+.+
T Consensus 52 ~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~-~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~--~~~~~ 128 (313)
T 2v78_A 52 LIARVGNDEFGKNIIEYSRAQGIDTSHIKVDN-ESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE--NYVRN 128 (313)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEET-TSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH--HHHHT
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcCceEEEcC-CCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH--HHhcC
Confidence 457888775 3455899999998765421 112221 111 012344444432 22343
Q ss_pred CCCcccCEE-EEeecC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC-hhHHHHHHHhhcCCce--EEcC
Q 022988 82 NNLLYYTHL-LTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVAS--MLTP 155 (289)
Q Consensus 82 ~~~~~~~~v-~~G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~-~~~~~~l~~~ll~~~d--ii~p 155 (289)
++.+ +.|+.+ ++.+.+.+.++++.+++ . ++||+++.. +|.+ +...+.+.+ +++++| +++|
T Consensus 129 -----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~d~~il~~ 194 (313)
T 2v78_A 129 -----SRLVHSTGITLAISDNAKEAVIKAFELAKS-----R-SLDTNIRPK--LWSSLEKAKETILS-ILKKYDIEVLIT 194 (313)
T ss_dssp -----SSEEEEEHHHHHHCHHHHHHHHHHHHHCSS-----E-EEECCCCGG--GSSCHHHHHHHHHH-HHHHSCEEEEEE
T ss_pred -----CCEEEEcCchhhcChHHHHHHHHHHHHHHH-----h-CcCCcCChh--hcCCHHHHHHHHHH-HHHhcCeeEEEC
Confidence 3444 445543 35556777778777653 2 899988642 4432 233344444 788999 9999
Q ss_pred CHHHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHH
Q 022988 156 NQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWS 224 (289)
Q Consensus 156 N~~E~~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l 224 (289)
|++|++.|+|. ++.++++++|+++|++.|++|+|+ +|+++..++ .+||+||||+|+|+|+++|
T Consensus 195 N~~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l 268 (313)
T 2v78_A 195 DPDDTKILLDV-----TDPDEAYRKYKELGVKVLLYKLGS-KGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLY 268 (313)
T ss_dssp CHHHHHHHHSC-----CCHHHHHHHHHHTTEEEEEEECGG-GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCC-----CCHHHHHHHHHhCCCCEEEEEECC-CCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHH
Confidence 99999999996 356678888988999999999997 888765432 2699999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 022988 225 NKYRDNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 225 ~~~g~~~~~A~~~A~a~a~~~l~~ 248 (289)
.+ |.++++|+++|+++++.++++
T Consensus 269 ~~-g~~~~~a~~~a~~~aa~~v~~ 291 (313)
T 2v78_A 269 LQ-GKDIEYSLAHGIAASTLVITV 291 (313)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred Hc-CCCHHHHHHHHHHHHHHHhcc
Confidence 98 999999999999997666543
No 44
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.86 E-value=2.6e-22 Score=182.80 Aligned_cols=150 Identities=17% Similarity=0.154 Sum_probs=118.9
Q ss_pred cCEEEE-ee-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccC-ChhHHHHHHHhhcCCceEEcCCHHHHHHh
Q 022988 87 YTHLLT-GY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAEQL 163 (289)
Q Consensus 87 ~~~v~~-G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~-~~~~~~~l~~~ll~~~dii~pN~~E~~~L 163 (289)
++.+.+ |+ ++++.+.+.+.++++.++++ +++++|||+++.. +|. .+...+.+.+ +++++|+++||++|++.|
T Consensus 142 ~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~Ea~~l 216 (339)
T 1tyy_A 142 YEWFYFSSIGLTDRPAREACLEGARRMREA--GGYVLFDVNLRSK--MWGNTDEIPELIAR-SAALASICKVSADELCQL 216 (339)
T ss_dssp TCEEEEEHHHHSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCSCGGGHHHHHHH-HHHHCSEEEEEHHHHHHH
T ss_pred CCEEEEcchhhcCcccHHHHHHHHHHHHHc--CCEEEEeCCCCcc--ccCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 566554 43 45666778889999999987 8999999998753 443 2344555544 889999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCC----
Q 022988 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYR---- 228 (289)
Q Consensus 164 ~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g---- 228 (289)
+|.+ +.++++++|++.|++.|+||+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |
T Consensus 217 ~g~~-----~~~~~~~~l~~~g~~~VvvT~G~-~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~-g~~~~ 289 (339)
T 1tyy_A 217 SGAS-----HWQDARYYLRDLGCDTTIISLGA-DGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSR-ANCWD 289 (339)
T ss_dssp HCCS-----SGGGGSSTTGGGTCSCEEEECGG-GCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTT-SSSCC
T ss_pred hCCC-----CHHHHHHHHHHcCCCEEEEEECC-CceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHh-ccccc
Confidence 9973 34566777888899999999997 888765432 269999999999999999998 7
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 022988 229 -DNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 229 -~~~~~A~~~A~a~a~~~l~~ 248 (289)
.++++|+++|+++++.+++.
T Consensus 290 ~~~l~~a~~~A~a~aa~~v~~ 310 (339)
T 1tyy_A 290 HALLAEAISNANACGAMAVTA 310 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGS
T ss_pred cccHHHHHHHHHHHHHHHhCC
Confidence 89999999999987665543
No 45
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.85 E-value=6.1e-22 Score=177.82 Aligned_cols=199 Identities=17% Similarity=0.165 Sum_probs=137.4
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCC----------C--CCc-------ceeeCCHHHHHHHHHHHHh
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------Y--PTF-------KGQVLNGQQLCDLIEGLEA 81 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg----------~--~~i-------~g~~l~~~~~~~~~~~l~~ 81 (289)
++|.+|.|. ....|++.||+++++.... ..+|+ - ..+ ....++++++.. +.+..
T Consensus 52 ~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~ 128 (311)
T 2dcn_A 52 IIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDP-SAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE--EYVKS 128 (311)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEET-TSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH--HHHTT
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcC-CCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh--HHHcC
Confidence 468888875 3445899999988765421 11222 1 111 012344444332 22332
Q ss_pred CCCcccCEE-EEeecC--CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC--CceEEcCC
Q 022988 82 NNLLYYTHL-LTGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPN 156 (289)
Q Consensus 82 ~~~~~~~~v-~~G~l~--~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~--~~dii~pN 156 (289)
++.+ +.|+.+ ++.+.+.+.++++.+++ . ++||+++.. +|..+...+.+.+ +++ ++|+++||
T Consensus 129 -----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~~-~l~~~~~dil~~N 194 (311)
T 2dcn_A 129 -----ADLVHSSGITLAISSTAKEAVYKAFEIASN-----R-SFDTNIRLK--LWSAEEAKREILK-LLSKFHLKFLITD 194 (311)
T ss_dssp -----CSEEEEEHHHHHSCHHHHHHHHHHHHHCSS-----E-EEECCCCTT--TSCHHHHHHHHHH-HHHHCCEEEEEEE
T ss_pred -----CCEEEEeCcccccChHHHHHHHHHHHHHHH-----h-CcCccCchh--hCChHHHHHHHHH-HHhhcCCcEEECC
Confidence 4444 445543 45566778888887753 2 899988643 4433333444544 888 99999999
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHc
Q 022988 157 QFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSN 225 (289)
Q Consensus 157 ~~E~~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~ 225 (289)
+.|++.|+|. ++.++++++|+++ ++.|++|+|+ +|+++..++ .+||+||||+|+|+|+++|.
T Consensus 195 ~~E~~~l~g~-----~~~~~~~~~l~~~-~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~ 267 (311)
T 2dcn_A 195 TDDSKIILGE-----SDPDKAAKAFSDY-AEIIVMKLGP-KGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYY 267 (311)
T ss_dssp HHHHHHHHSC-----CCHHHHHHHHTTT-EEEEEEEEET-TEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCC-----CCHHHHHHHHHHh-CCEEEEEECC-CCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHH
Confidence 9999999996 3566788888887 8899999997 888765432 26999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 022988 226 KYRDNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 226 ~~g~~~~~A~~~A~a~a~~~l~~ 248 (289)
+ |+++++|+++|+++++.++++
T Consensus 268 ~-g~~~~~a~~~a~~~aa~~v~~ 289 (311)
T 2dcn_A 268 K-GFEMEKALDYAIVASTLNVMI 289 (311)
T ss_dssp T-TCCHHHHHHHHHHHHHHHTTS
T ss_pred c-CCCHHHHHHHHHHHHHHHhcc
Confidence 8 999999999999987665543
No 46
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.85 E-value=4e-21 Score=174.27 Aligned_cols=203 Identities=12% Similarity=0.105 Sum_probs=143.6
Q ss_pred ccCccchhh---cHHHHHhCC--CcceeeceEE-------eecCCCCC-C-c--ceeeCCHHHHHHHHHHHHhCCCcccC
Q 022988 25 VQGYVGNKS---AVFPLQLLG--YDVDPIHSVQ-------FSNHTGYP-T-F--KGQVLNGQQLCDLIEGLEANNLLYYT 88 (289)
Q Consensus 25 ~~G~vG~~~---~~~~l~~~G--v~~~~v~~~~-------~~~~tg~~-~-i--~g~~l~~~~~~~~~~~l~~~~~~~~~ 88 (289)
++|.+|.|. ....|++.| |+++++.... +-...|.. . + .|..+++++++.+++.+.+.- -.++
T Consensus 70 ~~~~vG~d~G~~i~~~L~~~g~~V~~~~v~~~~~t~~~~~~v~~~g~~~~~~~~~g~~l~~~~~~~~~~~~~~~~-~~~~ 148 (331)
T 2ajr_A 70 ATGFVGGYMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKMTL-SKVD 148 (331)
T ss_dssp EEEEEEHHHHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEECCCCCCCHHHHHHHHHHHHHHH-TTCS
T ss_pred EEEEecCchHHHHHHHHHHcCCccceEEEEcCCCCeEEEEEEeCCCceEEEEeCCCCCCCHHHHHHHHHHHHHhc-ccCC
Confidence 357778763 334588999 9988764311 11122322 1 1 233577777776544332110 0245
Q ss_pred EE-EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhc---CCceEEcCCHHH-HHHh
Q 022988 89 HL-LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFE-AEQL 163 (289)
Q Consensus 89 ~v-~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll---~~~dii~pN~~E-~~~L 163 (289)
.+ +.|+++.+.+.+.+.++++.++++ +++++|||+.. . +.+ ++ +++|+++||+.| ++.|
T Consensus 149 ~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~---------~----~~~-~l~~~~~~dil~~N~~E~~~~l 212 (331)
T 2ajr_A 149 CVVISGSIPPGVNEGICNELVRLARER--GVFVFVEQTPR---------L----LER-IYEGPEFPNVVKPDLRGNHASF 212 (331)
T ss_dssp EEEEESCCCTTSCTTHHHHHHHHHHHT--TCEEEEECCHH---------H----HHH-HHHSSCCCSEECCCCTTCCSCB
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHc--CCEEEEECChH---------H----HHH-HHhcCCCCeEEEeCccchHHHH
Confidence 44 457877554567788889999987 89999999531 1 122 33 359999999999 9999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEec--------c----cCCCCCchHHHHHHHHHHHc-cCCCC
Q 022988 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIG--------S----HQKEKGTGDLMTALLLGWSN-KYRDN 230 (289)
Q Consensus 164 ~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~--------~----~~dt~GAGD~f~g~l~~~l~-~~g~~ 230 (289)
+|.+..+.+++.+++++|+++ ++.|++|+|+ +|++++.. . .+||+||||+|+|+|+++|. + |++
T Consensus 213 ~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~-~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~-g~~ 289 (331)
T 2ajr_A 213 LGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEV-KNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKH-GAN 289 (331)
T ss_dssp TTBCCCSHHHHHHHHHHHHHH-SSEEEEEETT-TEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHH-CSC
T ss_pred hCCCCCCHHHHHHHHHHHHHh-cCEEEEeecC-CceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHc-CCC
Confidence 998776777888899999888 9999999997 77765432 1 26899999999999999999 9 999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022988 231 LDIAAELAVSSLQALLQ 247 (289)
Q Consensus 231 ~~~A~~~A~a~a~~~l~ 247 (289)
+++|+++|++++..+++
T Consensus 290 ~~~al~~A~a~aa~~v~ 306 (331)
T 2ajr_A 290 FLEMAKFGFASALAATR 306 (331)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999998755553
No 47
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=3.5e-21 Score=175.65 Aligned_cols=191 Identities=16% Similarity=0.165 Sum_probs=132.6
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC----------CCCCc---cee--eCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTF---KGQ--VLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t----------g~~~i---~g~--~l~~~~~~~~~~~l~~~~~~ 85 (289)
++|.+|.|. ....|++.||+++++.... ..+| |...+ .+. .++++++. .+.+..
T Consensus 85 ~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~--~~~l~~---- 157 (343)
T 2rbc_A 85 LWGAVGDDETGTRILRDLSESGIDTSGMTVAP-GARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT--PEDIAL---- 157 (343)
T ss_dssp EECEEESSHHHHHHHHHHHHTTEECTTCEEET-TCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC--HHHHTT----
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCceeeEEEcC-CCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc--HhhhCC----
Confidence 367888875 3445889999988764321 0122 21111 111 12222221 112332
Q ss_pred ccCEEEEe-ecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 86 YYTHLLTG-YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 86 ~~~~v~~G-~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
++.+.++ .. .+.+.++++.++++ +++++|||... . +.+.+.+++++|+++||++|++.|+
T Consensus 158 -~~~v~~~~~~-----~~~~~~~~~~a~~~--g~~v~~Dp~~~-------~----~~~~~~ll~~~dil~~N~~Ea~~l~ 218 (343)
T 2rbc_A 158 -FDAVLVDVRW-----PELALDVLTVARAL--GKPAILDGDVA-------P----VETLEGLAPAATHIVFSEPAATRLT 218 (343)
T ss_dssp -CSEEEECSSS-----HHHHHHHHHHHHHT--TCCEEEEECSC-------C----HHHHHHHGGGCSEEEEEHHHHHHHH
T ss_pred -CCEEEEcCCC-----HHHHHHHHHHHHHC--CCEEEEECCcc-------c----cccHHHHHhcCCEEEeCHHHHHHHc
Confidence 4555544 32 24677888888887 89999999532 1 1222227899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCC-CeEEEeeeecCCcEEEecc-------------cCCCCCchHHHHHHHHHHHccCCCC
Q 022988 165 GFRIGSEADGREACKILHAAGP-AKVVITSINIDGNLFLIGS-------------HQKEKGTGDLMTALLLGWSNKYRDN 230 (289)
Q Consensus 165 g~~~~~~~~~~~a~~~L~~~g~-~~Vvvt~g~~~G~~~~~~~-------------~~dt~GAGD~f~g~l~~~l~~~g~~ 230 (289)
|.+ +++++++.|.++|+ +.|+||+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |++
T Consensus 219 g~~-----~~~~~~~~l~~~g~~~~VvvT~G~-~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~-g~~ 291 (343)
T 2rbc_A 219 GLE-----TVKDMLPVLHARYPQTFIAVTAGP-AGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAE-GMQ 291 (343)
T ss_dssp CCS-----SHHHHHHHHHHHSTTSEEEEECGG-GCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT-TCC
T ss_pred CCC-----CHHHHHHHHHHhCCCceEEEEECC-cceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHc-CCC
Confidence 973 56778888999999 999999997 787765432 168999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 022988 231 LDIAAELAVSSLQALLQR 248 (289)
Q Consensus 231 ~~~A~~~A~a~a~~~l~~ 248 (289)
+++|+++|++++..++++
T Consensus 292 ~~~a~~~A~~~aa~~v~~ 309 (343)
T 2rbc_A 292 SRAAVRLSSVAAALKCTV 309 (343)
T ss_dssp HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999987665543
No 48
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.84 E-value=2.1e-21 Score=174.65 Aligned_cols=122 Identities=19% Similarity=0.212 Sum_probs=99.4
Q ss_pred HHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEE
Q 022988 111 LRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVV 190 (289)
Q Consensus 111 ~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~a~~~L~~~g~~~Vv 190 (289)
++++ ++++++||+++.. +. ..+++++|+++||++|++.|+|.+..+.+++.+++++|+++|++.|+
T Consensus 159 a~~~--~~~v~~Dp~~~~~---~~---------~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vv 224 (311)
T 1vm7_A 159 AKRF--NGIVIFDPAPAQG---IN---------EEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVI 224 (311)
T ss_dssp HHHC--CSEEEECCCSCTT---CC---------GGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEE
T ss_pred HHHc--CCEEEEeCcchhh---hh---------HHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEE
Confidence 6665 8899999987421 11 24789999999999999999986433345677888999999999999
Q ss_pred EeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Q 022988 191 ITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 191 vt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~~ 248 (289)
+|+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |.++++|+++|+++++.++++
T Consensus 225 vT~G~-~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 291 (311)
T 1vm7_A 225 VKLGD-KGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSE-GKNPEEAVIFGTAAAAISVTR 291 (311)
T ss_dssp EECGG-GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred EEECC-CCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHhCc
Confidence 99997 888765432 269999999999999999998 999999999999987666543
No 49
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.84 E-value=2.9e-21 Score=178.58 Aligned_cols=204 Identities=14% Similarity=0.070 Sum_probs=138.6
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCC---------c---ce--eeCCHHHHHHHHHHHHhCCCcc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPT---------F---KG--QVLNGQQLCDLIEGLEANNLLY 86 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~---------i---~g--~~l~~~~~~~~~~~l~~~~~~~ 86 (289)
+.|.+|.|. ....|++.||++.++... ...|+... + .+ ..++++ +...+.+..
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~--~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~--~~~~~~l~~----- 180 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDKEGLATRFMVAP--GQSTGVCAVLINEKERTLCTHLGACGSFRLP--EDWTTFASG----- 180 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECT--TCCCEEEEEEEETTEEEEEEECGGGGGCCCC--TTHHHHTTT-----
T ss_pred EEEEecCChhHHHHHHHHHHcCCceeeeecC--CCCCeEEEEEEcCCceeEeeccChhhhCChh--hhhHHHhhc-----
Confidence 357778775 344588999999876421 12333111 1 01 013222 111222332
Q ss_pred cCEEE-EeecCCHhHHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 87 YTHLL-TGYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 87 ~~~v~-~G~l~~~~~~~~~~~~l~~~k~-~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
++.+. .|+.+. .+.+.+.++++.+++ + ++++++||.. ..| .+...+.+.+ +++++|+++||+.|++.|+
T Consensus 181 ~~~v~~~g~~~~-~~~~~~~~~~~~a~~~~--g~~v~~d~~~----~~~-~~~~~~~l~~-ll~~~dil~pN~~Ea~~L~ 251 (383)
T 2abs_A 181 ALIFYATAYTLT-ATPKNALEVAGYAHGIP--NAIFTLNLSA----PFC-VELYKDAMQS-LLLHTNILFGNEEEFAHLA 251 (383)
T ss_dssp CCEEEEEGGGGT-TCHHHHHHHHHHHHTST--TCEEEEECCC----HHH-HHHCHHHHHH-HHHTCSEEEEEHHHHHHHH
T ss_pred CCEEEEeeeccc-CCHHHHHHHHHHHHHhc--CCEEEEeCCc----HHH-HHHHHHHHHH-HHhhCCEEeCCHHHHHHHh
Confidence 45544 465443 345788889999988 7 8899999842 122 2233344544 8889999999999999998
Q ss_pred CCC-CCC-----------HHHHHHHHHHHHh------c-CCCeEEEeeeecCCcEEE-----ecc--------------c
Q 022988 165 GFR-IGS-----------EADGREACKILHA------A-GPAKVVITSINIDGNLFL-----IGS--------------H 206 (289)
Q Consensus 165 g~~-~~~-----------~~~~~~a~~~L~~------~-g~~~Vvvt~g~~~G~~~~-----~~~--------------~ 206 (289)
|.. ..+ .++++++++.|.+ + |++.|+||+|+ +|++++ .+. .
T Consensus 252 g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~-~Ga~~~~~~~~~~~~~~~~~~~~v~~~~v 330 (383)
T 2abs_A 252 KVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGH-NPVIAAEQTADGTVVVHEVGVPVVAAEKI 330 (383)
T ss_dssp HHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTT-SCEEEEEECTTSCEEEEEECCCCCCGGGC
T ss_pred cccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCC-CCeEEEEeecCCCCeEEEecCccCCcCCc
Confidence 753 221 4677888888887 3 89999999997 888766 321 2
Q ss_pred CCCCCchHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Q 022988 207 QKEKGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 207 ~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~~ 248 (289)
+||+||||+|+|+|+++|++ |+++++|+++|++++..+++.
T Consensus 331 vDttGAGDaF~ag~~~~l~~-g~~l~~al~~A~a~aa~~v~~ 371 (383)
T 2abs_A 331 VDTNGAGDAFVGGFLYALSQ-GKTVKQCIMCGNACAQDVIQH 371 (383)
T ss_dssp CCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred CcCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999998 999999999999987666543
No 50
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.84 E-value=1.8e-21 Score=177.64 Aligned_cols=147 Identities=15% Similarity=0.213 Sum_probs=102.1
Q ss_pred CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCHHHHHH
Q 022988 97 SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGRE 176 (289)
Q Consensus 97 ~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~ 176 (289)
++...+.+.++++.+|++ +++|+|||++++. +|..+...+.+.+ +++++|+++||+.|++.|+|......+..+.
T Consensus 164 ~~~~~~~~~~~~~~ak~~--g~~v~~D~n~r~~--lw~~~~~~~~~~~-~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~ 238 (351)
T 4gm6_A 164 STFWLEMVVKIIREAKRN--GIKISFDMNYRAK--LWELEAAKRAYQQ-LLPLVDYCSAGQMDAVAFFEISSETTDYYQA 238 (351)
T ss_dssp CHHHHHHHHHHHHHHHHT--TCEEEEECCCCTT--TSCHHHHHHHHHH-HGGGCSEEECCHHHHHHTSCCCTTCSCHHHH
T ss_pred chhHHHHHHHHHHHHHHc--CCCcccCCCcCch--hhhhhhHHHHHHH-HHHhCCccccCHHHHHHHhCCCCchhHHHHH
Confidence 556678899999999998 9999999999865 6655555565655 8999999999999999999976433332222
Q ss_pred HHHHHHh----cCCCeEEEeeee--cCCcEEEec-----------ccCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHH
Q 022988 177 ACKILHA----AGPAKVVITSIN--IDGNLFLIG-----------SHQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAV 239 (289)
Q Consensus 177 a~~~L~~----~g~~~Vvvt~g~--~~G~~~~~~-----------~~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~ 239 (289)
..+.+.. .+.+.++++.+. ..|.++..+ ..+||+||||+|+|+|+++|.+ |+++++|+++|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~-g~~~~~al~~A~ 317 (351)
T 4gm6_A 239 MHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILS-EWRPDETVKFAT 317 (351)
T ss_dssp HHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHC-CCCHHHHHHHHH
Confidence 2222111 122233333321 012232221 1269999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHH
Q 022988 240 SSLQALLQRTVN 251 (289)
Q Consensus 240 a~a~~~l~~~~~ 251 (289)
+++ ++.+++.
T Consensus 318 aaa--al~v~~~ 327 (351)
T 4gm6_A 318 AAA--GLKHSIH 327 (351)
T ss_dssp HHH--HHHTTSS
T ss_pred HHH--HHHhCCC
Confidence 885 4444443
No 51
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.83 E-value=7e-21 Score=170.28 Aligned_cols=180 Identities=18% Similarity=0.125 Sum_probs=126.9
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCC----------CCCc---cee--eCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTF---KGQ--VLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg----------~~~i---~g~--~l~~~~~~~~~~~l~~~~~~ 85 (289)
++|.+|.|. ....|++.||+++++.... .+|+ ...+ .|. .+++++++...+.+.
T Consensus 58 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~--~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~----- 130 (299)
T 3ikh_A 58 LIAATGNDSNGAWIRQQIKNEPLMLLPDGHFN--QHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAV----- 130 (299)
T ss_dssp EECCCCSSHHHHHHHHHGGGSSCEEESSSCCS--SCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCC-----
T ss_pred EEEEECCCHHHHHHHHHHHHcCCceeeeEecC--CCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhc-----
Confidence 357888875 3445889999998774221 2232 2111 111 355554433222222
Q ss_pred ccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhC
Q 022988 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (289)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g 165 (289)
.++.+.++.. .+.+.+.++++.+|++ ++++++||.+... + + ..+++++|+++||+.|++.|+|
T Consensus 131 ~~~~v~~~g~---~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~---~--------~-~~ll~~~dil~~N~~E~~~l~g 193 (299)
T 3ikh_A 131 AGDILLQQGN---FSLDKTRALFQYARSR--GMTTVFNPSPVNP---D--------F-CHLWPLIDIAVVNESEAELLQP 193 (299)
T ss_dssp TTCEEEECSC---SCHHHHHHHHHHHHHT--TCEEEECCCSCCG---G--------G-GGCGGGCSEEEEEHHHHHHHCC
T ss_pred cCCEEEECCC---CCHHHHHHHHHHHHHc--CCEEEEccccchh---h--------H-HHHHhhCCEEEecHHHHHHHhc
Confidence 3566554321 2356778888899987 8999999965421 0 1 2488999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHH-HHHHHHccCCCCHHH
Q 022988 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTA-LLLGWSNKYRDNLDI 233 (289)
Q Consensus 166 ~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g-~l~~~l~~~g~~~~~ 233 (289)
.|++.|++|+|+ +|+++..++ .+||+||||+|+| +|+++|.+ |+++++
T Consensus 194 ------------------~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~-g~~~~~ 253 (299)
T 3ikh_A 194 ------------------YGVKTLVITQGA-AGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLR-GVAPDA 253 (299)
T ss_dssp ------------------CSCSEEEEECGG-GCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHT-TSSSCH
T ss_pred ------------------CCCCEEEEEECC-CceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHc-CCCHHH
Confidence 588999999997 888776542 2799999999999 99999998 999999
Q ss_pred -HHHHHHHHHHHHHHH
Q 022988 234 -AAELAVSSLQALLQR 248 (289)
Q Consensus 234 -A~~~A~a~a~~~l~~ 248 (289)
|+++|+++++.++++
T Consensus 254 ~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 254 LALAHASRAAAITVSR 269 (299)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCC
Confidence 999999997666543
No 52
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.82 E-value=2.2e-20 Score=167.94 Aligned_cols=194 Identities=18% Similarity=0.181 Sum_probs=132.4
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCC---------CCCCc---ce---eeCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT---------GYPTF---KG---QVLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~t---------g~~~i---~g---~~l~~~~~~~~~~~l~~~~~~ 85 (289)
+.|.+|.|. ....|++.||+++++.... ...| |-..+ .+ ..+++++++. +.+.+.+++
T Consensus 52 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~--~~l~~~~~~ 128 (313)
T 3ewm_A 52 LISKVGNDPFGEYLIEELSKENVDTRGIVKDE-KKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW--DIVEEAKIV 128 (313)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEES-SSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH--HHHHHCSEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCccceeecC-CCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH--HHhCCCCEE
Confidence 467888775 3455899999998765321 1122 21111 12 2355554432 234444432
Q ss_pred ccCEEEEee-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccC--ChhHHHHHHHhhcCCceEEcCCHHHHHH
Q 022988 86 YYTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV--PSELVSVYREKVVPVASMLTPNQFEAEQ 162 (289)
Q Consensus 86 ~~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~--~~~~~~~l~~~ll~~~dii~pN~~E~~~ 162 (289)
.+.|+ ++.+.+.+.+.++++.++ . +++++|||+++.. +|. .++..+.+.+ +++++|+++||++|++.
T Consensus 129 ----~~~g~~~~~~~~~~~~~~~~~~a~-~--~~~v~~Dp~~~~~--~~~~~~~~~~~~~~~-~l~~~di~~~N~~E~~~ 198 (313)
T 3ewm_A 129 ----NFGSVILARNPSRETVMKVIKKIK-G--SSLIAFDVNLRLD--LWRGQEEEMIKVLEE-SIKLADIVKASEEEVLY 198 (313)
T ss_dssp ----EEESGGGGSTTHHHHHHHHHHHHB-T--TBEEEEECCCCGG--GGTTCHHHHHHHHHH-HHHHCSEEEEEHHHHHH
T ss_pred ----EEcCcccCCcchHHHHHHHHHHhc-c--CCEEEEeCCCChH--HcCCCHHHHHHHHHH-HHhhCCEEecCHHHHHH
Confidence 34565 345556788889999887 3 6899999987642 443 2334444544 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHc--cCCC
Q 022988 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSN--KYRD 229 (289)
Q Consensus 163 L~g~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~--~~g~ 229 (289)
|++.... ..+.+.|+||+|+ +|++++..+ .+||+||||+|+|+|+++|. + |+
T Consensus 199 l~~~~~~-------------~~~~~~vviT~G~-~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~-g~ 263 (313)
T 3ewm_A 199 LENQGVE-------------VKGSMLTAITLGP-KGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLK-GL 263 (313)
T ss_dssp HHTTTCC-------------CCCSSEEEEECGG-GEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSS-SC
T ss_pred HhccCcc-------------ccCceEEEEEECC-CCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcC-CC
Confidence 9986431 1245568999997 888766542 27999999999999999998 8 99
Q ss_pred CHHHHHHHHHHHHHHHH
Q 022988 230 NLDIAAELAVSSLQALL 246 (289)
Q Consensus 230 ~~~~A~~~A~a~a~~~l 246 (289)
++++|+++|++++..++
T Consensus 264 ~l~~a~~~A~~~aa~~v 280 (313)
T 3ewm_A 264 DLLKLGKFANLVAALST 280 (313)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999865554
No 53
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.80 E-value=4.4e-20 Score=165.17 Aligned_cols=195 Identities=13% Similarity=0.069 Sum_probs=127.0
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCCc----ceee--C-CHHHHHHHHHHHHhCCC--cccCEEE
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF----KGQV--L-NGQQLCDLIEGLEANNL--LYYTHLL 91 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i----~g~~--l-~~~~~~~~~~~l~~~~~--~~~~~v~ 91 (289)
++|.+|.|. ....|++.||+++++.... ..+|+...+ .|.. + ... .. ..+...++ ..++.+.
T Consensus 61 ~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~-~~~T~~~~~~~~~~g~~~~~~~~~-~~---~~~~~~~~~~~~~~~v~ 135 (302)
T 2c4e_A 61 LLSCVGYDFKNSGYERYLKNLDINISKLYYSE-EEETPKAWIFTDKDNNQITFFLWG-AA---KHYKELNPPNFNTEIVH 135 (302)
T ss_dssp EECEECTTTTTSHHHHHHHHTTCBCTTCEECS-SSCCCEEEEEECSSCCEECCEECG-GG---GGGGGCCCCCCCEEEEE
T ss_pred EEEEEeCCCchHHHHHHHHHcCCcccceEeeC-CCCCceEEEEECCCCCEEEEEeCC-hh---hhCCHhhcCcccCCEEE
Confidence 357888876 3456899999987654321 123332110 1110 0 000 00 01111111 1355555
Q ss_pred EeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCH
Q 022988 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSE 171 (289)
Q Consensus 92 ~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~ 171 (289)
++. ..+ +.+.++++.+|++ + +++|||+++.. .| .. +.+.+ +++++|+++||++|++.|+|.+..+.
T Consensus 136 ~~~---~~~-~~~~~~~~~a~~~--g-~v~~D~~~~~~--~~-~~---~~~~~-~l~~~dil~~N~~E~~~l~g~~~~~~ 201 (302)
T 2c4e_A 136 IAT---GDP-EFNLKCAKKAYGN--N-LVSFDPGQDLP--QY-SK---EMLLE-IIEHTNFLFMNKHEFERASNLLNFEI 201 (302)
T ss_dssp ECS---SCH-HHHHHHHHHHBTT--B-EEEECCGGGGG--GC-CH---HHHHH-HHHTCSEEEEEHHHHHHHHHHHTCCH
T ss_pred EeC---CCc-HHHHHHHHHHHhc--C-CEEEeCchhhh--hh-hH---HHHHH-HHhcCCEEEcCHHHHHHHhCCCCccH
Confidence 542 122 7788889999887 8 99999986421 22 22 23433 78899999999999999998643221
Q ss_pred HHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHH
Q 022988 172 ADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAV 239 (289)
Q Consensus 172 ~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~ 239 (289)
. +|+++ ++.|++|+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |+++++|+++|+
T Consensus 202 -----~--~l~~~-~~~vvvt~G~-~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~-g~~~~~a~~~a~ 271 (302)
T 2c4e_A 202 -----D--DYLER-VDALIVTKGS-KGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVK-GYDLEKCGLIGA 271 (302)
T ss_dssp -----H--HHHTT-CSEEEEECGG-GCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred -----H--HHHhc-CCEEEEEECC-CceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 1 67777 8999999997 887765421 368999999999999999998 999999999999
Q ss_pred HHHHHHHHH
Q 022988 240 SSLQALLQR 248 (289)
Q Consensus 240 a~a~~~l~~ 248 (289)
++++.++++
T Consensus 272 ~~aa~~~~~ 280 (302)
T 2c4e_A 272 ATASFVVEA 280 (302)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHcc
Confidence 987665543
No 54
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.80 E-value=1.4e-19 Score=164.26 Aligned_cols=194 Identities=19% Similarity=0.151 Sum_probs=127.9
Q ss_pred ccCccchhh--cHHHHHhCCCcceeeceEEeecCCC----------CCCc---ce--eeCCHHHHHHHHHHHHhCCCccc
Q 022988 25 VQGYVGNKS--AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTF---KG--QVLNGQQLCDLIEGLEANNLLYY 87 (289)
Q Consensus 25 ~~G~vG~~~--~~~~l~~~Gv~~~~v~~~~~~~~tg----------~~~i---~g--~~l~~~~~~~~~~~l~~~~~~~~ 87 (289)
++|.+|.|. ....|++.||+++++.... ..+|+ -..+ .| ..++++++......+.. .
T Consensus 76 ~i~~vG~D~g~i~~~L~~~gV~~~~v~~~~-~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~-----~ 149 (334)
T 2pkf_A 76 LVGAAGADFADYRDWLKARGVNCDHVLISE-TAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGK-----P 149 (334)
T ss_dssp EECEECGGGHHHHHHHHTTTEECTTCEECS-SCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCS-----C
T ss_pred EEEEEeCchHHHHHHHHHCCCceeeeEecC-CCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcC-----C
Confidence 357778763 2345888999987764321 01222 1111 11 11222334332222232 4
Q ss_pred CEEEE-eecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCC
Q 022988 88 THLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (289)
Q Consensus 88 ~~v~~-G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~ 166 (289)
+.+.+ |.. .+.+.++++.++++ ++++++||+++.. +| .. +.+. .+++++|+++||+.|++.|+|.
T Consensus 150 ~~v~~~~~~-----~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~-~~---~~l~-~~l~~~dil~~N~~E~~~l~g~ 215 (334)
T 2pkf_A 150 ELVIIGAND-----PEAMFLHTEECRKL--GLAFAADPSQQLA--RL-SG---EEIR-RLVNGAAYLFTNDYEWDLLLSK 215 (334)
T ss_dssp SEEEEESCC-----HHHHHHHHHHHHHH--TCCEEEECGGGGG--TS-CH---HHHH-TTTTTCSEEEEEHHHHHHHHHH
T ss_pred CEEEEcCCC-----hHHHHHHHHHHHhc--CCeEEEeccchhh--hh-hH---HHHH-HHHhcCCEEecCHHHHHHHhcc
Confidence 55443 332 35677888888887 8899999998753 33 22 2333 4899999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------c--CCCCCchHHHHHHHHHHHccCCCCHHH
Q 022988 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------H--QKEKGTGDLMTALLLGWSNKYRDNLDI 233 (289)
Q Consensus 167 ~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~--~dt~GAGD~f~g~l~~~l~~~g~~~~~ 233 (289)
+..+. +.|++. ++.|++|+|+ +|++++..+ . +||+||||+|+|+|+++|.+ |+++++
T Consensus 216 ~~~~~-------~~l~~~-~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~-g~~~~~ 285 (334)
T 2pkf_A 216 TGWSE-------ADVMAQ-IDLRVTTLGP-KGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSA-GLGLER 285 (334)
T ss_dssp HCCCH-------HHHHTT-CSCEEEECGG-GCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHT-TCCHHH
T ss_pred CCCCH-------HHHHhc-CCEEEEEeCC-CCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHc-CCCHHH
Confidence 43222 224443 8899999997 787665321 1 59999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHH
Q 022988 234 AAELAVSSLQALLQR 248 (289)
Q Consensus 234 A~~~A~a~a~~~l~~ 248 (289)
|+++|+++++.++++
T Consensus 286 a~~~A~~~aa~~v~~ 300 (334)
T 2pkf_A 286 SAQLGSLVAVLVLES 300 (334)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999987666543
No 55
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.77 E-value=1.8e-19 Score=161.08 Aligned_cols=199 Identities=17% Similarity=0.097 Sum_probs=128.4
Q ss_pred ccCccchhh--cHHHHHhCCCcceeeceE------EeecCCCCCCc---c--eeeCCHHHHHHHHHHHHhCCCcccCEEE
Q 022988 25 VQGYVGNKS--AVFPLQLLGYDVDPIHSV------QFSNHTGYPTF---K--GQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (289)
Q Consensus 25 ~~G~vG~~~--~~~~l~~~Gv~~~~v~~~------~~~~~tg~~~i---~--g~~l~~~~~~~~~~~l~~~~~~~~~~v~ 91 (289)
++|.+|.|. ....|++.||+++++... ..-...|-..+ . ...+++++++. . ..+.+.
T Consensus 55 ~i~~vG~D~~~~~~~L~~~gVd~~~v~~~~~t~~~~i~~~~g~~~~~~~~~~~~~l~~~~~~~-------~---~~~~v~ 124 (298)
T 1vk4_A 55 VITKCTREDVSKFSFLRDNGVEVVFLKSPRTTSIENRYGSDPDTRESFLISAADPFTESDLAF-------I---EGEAVH 124 (298)
T ss_dssp EEEEECTTTGGGGTTTGGGTCEEEEEECSSCEEEEEEC-----CCEEEEEECCCCCCGGGGGG-------C---CSSEEE
T ss_pred EEEEEcCCHHHHHHHHHHcCCceEEEecCCCcEEEEEEcCCCCeeEEEeccccccCCHHHcCc-------C---CCCEEE
Confidence 356777765 233478899998876421 00001121111 1 12344444321 1 356777
Q ss_pred Eeec-CCHhHHHHHHHHHHHHHhcCCCceEEEccccc-cC--CCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCC
Q 022988 92 TGYI-GSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DE--GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (289)
Q Consensus 92 ~G~l-~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~-~~--g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~ 167 (289)
+|.+ +.+ ...++++.++++ ++++++||++. .. +..+ .+...+.+. .+++++|+++||++|++.|+|.+
T Consensus 125 ~~~~~~~~----~~~~~~~~~~~~--g~~v~~D~~~~~~~~~~~~~-~~~~~~~~~-~~l~~~dil~~N~~E~~~l~g~~ 196 (298)
T 1vk4_A 125 INPLWYGE----FPEDLIPVLRRK--VMFLSADAQGFVRVPENEKL-VYRDWEMKE-KYLKYLDLFKVDSREAETLTGTN 196 (298)
T ss_dssp ECCSSTTS----SCGGGHHHHHHH--CSEEEEETHHHHEEEETTEE-EECCCTTHH-HHGGGCSEEEEEHHHHHHHHSCS
T ss_pred ECCccccc----ccHHHHHHHHHc--CCEEEEecCccccccccccc-cccchHHHH-hhcccCCEEecCHHHHHHHhCCC
Confidence 7765 322 223556677776 88999999742 10 0000 000001122 37889999999999999999973
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHH
Q 022988 168 IGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAEL 237 (289)
Q Consensus 168 ~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~ 237 (289)
+++++++.|.++|++.|+||+ . +|++++.+. .+||+||||+|+|+|+++|.+.|+++++|+++
T Consensus 197 -----~~~~~~~~l~~~g~~~vvvT~-~-~G~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~ 269 (298)
T 1vk4_A 197 -----DLRESCRIIRSFGAKIILATH-A-SGVIVFDGNFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKF 269 (298)
T ss_dssp -----CHHHHHHHHHHTTCSSEEEEE-T-TEEEEESSSEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred -----CHHHHHHHHHhcCCCEEEEEc-C-CCcEEEeCCEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 567788889899999999999 6 888765321 26899999999999999998328999999999
Q ss_pred HHHHHHHHHHH
Q 022988 238 AVSSLQALLQR 248 (289)
Q Consensus 238 A~a~a~~~l~~ 248 (289)
|+++++.+++.
T Consensus 270 A~a~aa~~v~~ 280 (298)
T 1vk4_A 270 AAAVTSVKMRH 280 (298)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHcc
Confidence 99987666544
No 56
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.77 E-value=8.2e-19 Score=157.78 Aligned_cols=142 Identities=17% Similarity=0.285 Sum_probs=108.5
Q ss_pred ccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhC
Q 022988 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (289)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g 165 (289)
.++.+.+|.++++ ...++++.+ ++ +.++++||.. +|. +...+.+++ +++++|+++||++|++.|+|
T Consensus 119 ~~~~v~~~~~~~~----~~~~~~~~~-~~--~~~v~~Dp~~-----~~~-~~~~~~~~~-~l~~~dil~~N~~E~~~l~g 184 (313)
T 3kd6_A 119 DSKFVCLGNIDPE----LQLKVLDQI-DD--PKLVVCDTMN-----FWI-EGKPEELKK-VLARVDVFIVNDSEARLLSG 184 (313)
T ss_dssp TCSEEEECSSCHH----HHHHHHTTC-SS--CSEEEEECCH-----HHH-HHCHHHHHH-HHTTCSEEEEEHHHHHHHHS
T ss_pred cCCEEEEcCCCHH----HHHHHHHHH-hh--CCEEEEcChh-----hhh-hhhHHHHHH-HHhcCCEEEeCHHHHHHHhC
Confidence 3677888877533 334555555 33 7889999921 221 222344544 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc------------cCCCCCchHHHHHHHHHHHccCCC----
Q 022988 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS------------HQKEKGTGDLMTALLLGWSNKYRD---- 229 (289)
Q Consensus 166 ~~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~------------~~dt~GAGD~f~g~l~~~l~~~g~---- 229 (289)
. ++..++++.|+++|++.|+||+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |.
T Consensus 185 ~-----~~~~~~~~~l~~~g~~~vvvt~G~-~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~-g~~~~~ 257 (313)
T 3kd6_A 185 D-----PNLVKTARIIREMGPKTLIIKKGE-HGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLAR-CGNTSE 257 (313)
T ss_dssp C-----SCHHHHHHHHHTTSCSEEEEECTT-SCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHH-HCCCCH
T ss_pred C-----CCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHc-CCCccc
Confidence 6 367788999999999999999997 888766432 268999999999999999998 87
Q ss_pred -CHHHHHHHHHHHHHHHHHH
Q 022988 230 -NLDIAAELAVSSLQALLQR 248 (289)
Q Consensus 230 -~~~~A~~~A~a~a~~~l~~ 248 (289)
++++|+++|+++++.++++
T Consensus 258 ~~l~~a~~~a~~~aa~~v~~ 277 (313)
T 3kd6_A 258 AEMRKAVLYGSAMASFCVEQ 277 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHHHHHHHee
Confidence 8999999999887665543
No 57
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.75 E-value=1.1e-17 Score=150.26 Aligned_cols=192 Identities=12% Similarity=0.076 Sum_probs=124.4
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEE----------eecCCCCCCc---c--eeeCCHHHHHHHHHHHHhCCCc
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ----------FSNHTGYPTF---K--GQVLNGQQLCDLIEGLEANNLL 85 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~----------~~~~tg~~~i---~--g~~l~~~~~~~~~~~l~~~~~~ 85 (289)
++|.+|.|. ....|++.||+++++.... +....|...+ . ...+++++++.. .+.
T Consensus 73 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~--~l~----- 145 (312)
T 2hlz_A 73 FMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKV--DLT----- 145 (312)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTS--CGG-----
T ss_pred EEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHh--hhc-----
Confidence 357888765 3445899999987654321 0111222111 1 124566555421 122
Q ss_pred ccCEEEEeecCCHhHHHHHHHHHHHHHhcC-C-----CceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH
Q 022988 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSIN-P-----NLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (289)
Q Consensus 86 ~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~-~-----~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E 159 (289)
.++.+.++... .+.+.++++.++++. + ++++++||.... + .+. .+++++|+++||++|
T Consensus 146 ~~~~v~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~-------~----~~~-~~l~~~dil~~n~~e 209 (312)
T 2hlz_A 146 QFKWIHIEGRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPR-------E----ELF-QLFGYGDVVFVSKDV 209 (312)
T ss_dssp GEEEEEEECSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCC-------G----GGG-GGGGSSSEEEECHHH
T ss_pred cCCEEEEeccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccch-------H----HHH-HHHhcCCEEEEcHHH
Confidence 24544443222 244556666666541 1 468999984321 0 122 388999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHhcCC--CeEEEeeeecCCcEEEec-c------------cCCCCCchHHHHHHHHHHH
Q 022988 160 AEQLTGFRIGSEADGREACKILHAAGP--AKVVITSINIDGNLFLIG-S------------HQKEKGTGDLMTALLLGWS 224 (289)
Q Consensus 160 ~~~L~g~~~~~~~~~~~a~~~L~~~g~--~~Vvvt~g~~~G~~~~~~-~------------~~dt~GAGD~f~g~l~~~l 224 (289)
++.| |. ++.+++++.+.+++. +.|++|+|+ +|+++... . .+||+||||+|+|+|+++|
T Consensus 210 a~~l-g~-----~~~~~~~~~l~~~~~~g~~vvvt~G~-~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l 282 (312)
T 2hlz_A 210 AKHL-GF-----QSAEEALRGLYGRVRKGAVLVCAWAE-EGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSL 282 (312)
T ss_dssp HHHT-TC-----CSHHHHHHHHGGGSCTTCEEEEECGG-GCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHH
T ss_pred HHHc-CC-----CCHHHHHHHHHHhcCCCCEEEEEecc-cCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHH
Confidence 9987 64 245566777766543 799999997 78766531 1 1689999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 022988 225 NKYRDNLDIAAELAVSSLQALLQ 247 (289)
Q Consensus 225 ~~~g~~~~~A~~~A~a~a~~~l~ 247 (289)
.+ |+++++|+++|++++..+++
T Consensus 283 ~~-g~~~~~a~~~a~~~aa~~v~ 304 (312)
T 2hlz_A 283 SQ-GRSVQEALRFGCQVAGKKCG 304 (312)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHT
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHh
Confidence 98 99999999999999766654
No 58
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.75 E-value=4.9e-19 Score=159.19 Aligned_cols=182 Identities=16% Similarity=0.157 Sum_probs=122.4
Q ss_pred ccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCCc----cee-----eCCH-HHHHHHHHHHHhCCCcccCEE
Q 022988 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF----KGQ-----VLNG-QQLCDLIEGLEANNLLYYTHL 90 (289)
Q Consensus 25 ~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i----~g~-----~l~~-~~~~~~~~~l~~~~~~~~~~v 90 (289)
+.|.+|.|. ....|++.||+++++.... ..|+...+ .|. ...+ ..+..+.+.+. .++.+
T Consensus 75 ~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~--~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~l~-----~~~~v 147 (310)
T 3go6_A 75 FSGAFGDDPAAAQLRAHLRANAVGLDRTVTVP--GPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVA-----NCDVL 147 (310)
T ss_dssp EECEECSSHHHHHHHHHHHHTTCBCTTCEECS--SCCEEEEEEECTTSCEEEEEECGGGGGCCCCTTTTT-----TCSEE
T ss_pred EEEEECCCHHHHHHHHHHHHcCCccceeEecC--CCCCEEEEEEcCCCCEEEEecCChhhhHHHHHHHhh-----cCCEE
Confidence 357888774 4445899999998774321 23331110 011 0000 01111111111 35666
Q ss_pred EEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCC
Q 022988 91 LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (289)
Q Consensus 91 ~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~ 170 (289)
.++. +.+.+.+.++++.++++ ++++++||++... . .+.++. +++++|+++||++|++.|+|.
T Consensus 148 ~~~~---~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~----~----~~~~~~-ll~~~dil~~N~~Ea~~l~g~---- 209 (310)
T 3go6_A 148 LTQL---EIPVATALAAARAAQSA--DAVVMVNASPAGQ----D----RSSLQD-LAAIADVVIANEHEANDWPSP---- 209 (310)
T ss_dssp EECS---SSCHHHHHHHHHHHHHT--TCEEEEECCSSSC----C----HHHHHH-HHHHCSEEEEEHHHHHHSSSC----
T ss_pred EECC---CCCHHHHHHHHHHHHHc--CCEEEEcCCcccc----c----hHHHHH-HHhhCCEEEeCHHHHHHHhCC----
Confidence 5432 23456788888999987 8999999976431 1 233333 788999999999999999984
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------cCCCCCchHHHHHHHHHHHccC---CCCHHHHHH
Q 022988 171 EADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------HQKEKGTGDLMTALLLGWSNKY---RDNLDIAAE 236 (289)
Q Consensus 171 ~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~~dt~GAGD~f~g~l~~~l~~~---g~~~~~A~~ 236 (289)
++.|++|+|+ +|++++..+ .+||+||||+|+|+|+++|.+. |.++++|++
T Consensus 210 ---------------~~~vvvt~G~-~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~ 273 (310)
T 3go6_A 210 ---------------PTHFVITLGV-RGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALR 273 (310)
T ss_dssp ---------------CSEEEEECGG-GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHH
T ss_pred ---------------CCEEEEEECC-CCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHH
Confidence 6899999997 898776542 2799999999999999999842 689999999
Q ss_pred HHHHHHHHHHH
Q 022988 237 LAVSSLQALLQ 247 (289)
Q Consensus 237 ~A~a~a~~~l~ 247 (289)
+|+++++.+++
T Consensus 274 ~A~~~aa~~v~ 284 (310)
T 3go6_A 274 RACAAGALATL 284 (310)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99998755553
No 59
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.74 E-value=4.3e-17 Score=146.30 Aligned_cols=206 Identities=18% Similarity=0.208 Sum_probs=131.3
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCC-----CCCcceeeC-CHHHHHHHHHHHHhCCCcc
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTG-----YPTFKGQVL-NGQQLCDLIEGLEANNLLY 86 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg-----~~~i~g~~l-~~~~~~~~~~~l~~~~~~~ 86 (289)
++|+||+|+|++.+|++|..+++.+++. |.....+.+. ++..+ ..++....+ ..++++.++ . .
T Consensus 43 ~~G~vlvIaGsd~~~GA~ilA~~aal~~-Gaglvt~~t~--~~~~~~v~~~~pe~~~~~~~~~~ql~~~~---~-----~ 111 (310)
T 2r3b_A 43 NFGRVVLIGGNRQYGGAIIMSTEACINS-GAGLTTVITD--VKNHGPLHARCPEAMVVGFEETVLLTNVV---E-----Q 111 (310)
T ss_dssp GGCEEEEECCCSSSHHHHHHHHHHHHHH-TCSEEEEECC--GGGHHHHHHHCTTCEEECTTCHHHHHHHH---H-----H
T ss_pred cCCEEEEEECCCCCCcHHHHHHHHHHHh-CcCcEEEEEC--hhhHhHHhhCChhheEecCCcHHHHHHHh---c-----c
Confidence 4678999999999999999998888876 6554333222 12111 011111111 123443332 2 2
Q ss_pred cCEEEEee-cC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhc--CCceEEcCCHHHHHH
Q 022988 87 YTHLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV--PVASMLTPNQFEAEQ 162 (289)
Q Consensus 87 ~~~v~~G~-l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll--~~~dii~pN~~E~~~ 162 (289)
++++++|+ ++ ++...+.+.++++..+ . ++|+|+||.-. .+...+ ..++ +.+++||||..|++.
T Consensus 112 ~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~g~----~ll~~~------~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 112 ADVILIGPGLGLDATAQQILKMVLAQHQ-K--QQWLIIDGSAI----TLFSQG------NFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp CSEEEECTTCCSSHHHHHHHHHHHHHCC-T--TCEEEEETHHH----HHHHHT------TCCCSSGGGEEEECCHHHHHH
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHhcC-C--CCcEEEcCCcc----hhcccc------hhhhcCCCCEEEcCCHHHHHH
Confidence 67889987 55 6666777888777654 3 78999999321 000000 0123 468999999999999
Q ss_pred hhCCCCCCH-HHH-HHHHHHHHhcCCCeEEEeeeec----CCcEEEecc---cCCCCCchHHHHHHHHHHHccCCCCHHH
Q 022988 163 LTGFRIGSE-ADG-REACKILHAAGPAKVVITSINI----DGNLFLIGS---HQKEKGTGDLMTALLLGWSNKYRDNLDI 233 (289)
Q Consensus 163 L~g~~~~~~-~~~-~~a~~~L~~~g~~~Vvvt~g~~----~G~~~~~~~---~~dt~GAGD~f~g~l~~~l~~~g~~~~~ 233 (289)
|+|.++.+. ++. .+++++| |+ .|++|++.. +|..|.... ..+++|+||+|+|.+++.+++ |.++.+
T Consensus 179 L~g~~~~~~~~~~a~~aA~~l---g~-~VvlKG~~~vi~~~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~-g~~~~e 253 (310)
T 2r3b_A 179 LSHLPIEQQTLANNQRQQAKL---GS-TIVLKSHRTTIFHAGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQ-FKPTIE 253 (310)
T ss_dssp HHCCCGGGCCHHHHHHHHHHH---TS-EEEECSTTCEEECSSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHH-SCSSHH
T ss_pred HhCCCCCcccchHHHHHHHHh---Cc-EEEEeCCceEEEECCEEEEECCCCCCCCCCChHHHHHHHHHHHHHc-CCCHHH
Confidence 999876543 244 6777777 54 677776431 122222211 157899999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHH
Q 022988 234 AAELAVSSLQALLQR 248 (289)
Q Consensus 234 A~~~A~a~a~~~l~~ 248 (289)
|++.|. +.+.....
T Consensus 254 A~~~A~-~~~~~ag~ 267 (310)
T 2r3b_A 254 TIAGAV-YLHSLIGD 267 (310)
T ss_dssp HHHHHH-HHHHHHHH
T ss_pred HHHHHH-HHHHHHHH
Confidence 999995 44444443
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.73 E-value=8.8e-17 Score=141.98 Aligned_cols=149 Identities=17% Similarity=0.126 Sum_probs=104.8
Q ss_pred EEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC--CceEEcCCHHHHHHhhCCC
Q 022988 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQLTGFR 167 (289)
Q Consensus 90 v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~--~~dii~pN~~E~~~L~g~~ 167 (289)
+.+|+ +++...+.+.++++.++++ ++++|+||+...... ... +..+ ++++ ++|+|+||..|++.|+|.+
T Consensus 64 i~~G~-~~~~~~~~~~~~~~~a~~~--~~pvVlDp~g~~~~~--~~~---~~~~-~ll~~~~~~vitPN~~E~~~L~g~~ 134 (272)
T 1ekq_A 64 LNIGT-LSKESVEAMIIAGKSANEH--GVPVILDPVGAGATP--FRT---ESAR-DIIREVRLAAIRGNAAEIAHTVGVT 134 (272)
T ss_dssp EECTT-CCHHHHHHHHHHHHHHHHT--TCCEEEECTTBTTBH--HHH---HHHH-HHHHHSCCSEEEECHHHHHHHCC--
T ss_pred EECCC-CCHHHHHHHHHHHHHHHhc--CCeEEEeCCCcCccc--chH---HHHH-HHHccCCCeEECCCHHHHHHHhCCC
Confidence 44566 4566788889999999887 899999996542110 111 1122 3555 8999999999999999976
Q ss_pred -C--------CCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEec--------cc---CCCCCchHHHHHHHHHHHccC
Q 022988 168 -I--------GSEADGREACKILHAAGPAKVVITSINIDGNLFLIG--------SH---QKEKGTGDLMTALLLGWSNKY 227 (289)
Q Consensus 168 -~--------~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~--------~~---~dt~GAGD~f~g~l~~~l~~~ 227 (289)
. .+.++..+++++|.+++...|++| |. .+ ++..+ .. .+++|+||+|+|++++++++
T Consensus 135 ~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~-~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa~la~- 210 (272)
T 1ekq_A 135 DWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GE-VD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCAV- 210 (272)
T ss_dssp -------------HHHHHHHHHHHHHHTSEEEEC-SS-SE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHTT-
T ss_pred cccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CC-CC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHHHHhc-
Confidence 4 345678888999987665667777 43 22 22221 11 47999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Q 022988 228 RDNLDIAAELAVSSLQALLQRTVN 251 (289)
Q Consensus 228 g~~~~~A~~~A~a~a~~~l~~~~~ 251 (289)
|.++.+|+++|+.+...+.....+
T Consensus 211 g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 211 EENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999876666665544
No 61
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.72 E-value=1.6e-17 Score=150.33 Aligned_cols=138 Identities=19% Similarity=0.187 Sum_probs=103.1
Q ss_pred cCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCC
Q 022988 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (289)
Q Consensus 87 ~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~ 166 (289)
++.+.++. ...+.+.++++.++++ +++++|||+++.. +| .. +.+++ +++++|+++||+.|++.|+|.
T Consensus 136 ~~~v~~~~----~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~-~~---~~~~~-~l~~~dil~~N~~Ea~~l~g~ 202 (326)
T 3b1n_A 136 IKLAIVGP----DGFQGMVQHTEELAQA--GVPFIFDPGQGLP--LF-DG---ATLRR-SIELATYIAVNDYEAKLVCDK 202 (326)
T ss_dssp CSEEEECS----CCHHHHHHHHHHHHHH--TCCEEECCGGGGG--GC-CH---HHHHH-HHHHCSEEEEEHHHHHHHHHH
T ss_pred CCEEEECC----ccHHHHHHHHHHHHHC--CCEEEEeCchhhh--hc-cH---HHHHH-HHHhCCEEecCHHHHHHHhCC
Confidence 56655432 1245677888889887 8999999998742 33 22 22333 788999999999999999985
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEeeeecCCcEEEecc-----------c-CCCCCchHHHHHHHHHHHccCCCCHHHH
Q 022988 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGS-----------H-QKEKGTGDLMTALLLGWSNKYRDNLDIA 234 (289)
Q Consensus 167 ~~~~~~~~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~-----------~-~dt~GAGD~f~g~l~~~l~~~g~~~~~A 234 (289)
...+.+ .+++ +++.|+||+|+ +|++++..+ . +||+||||+|+|+|+++|.+ |+++++|
T Consensus 203 ~~~~~~-------~l~~-~~~~vvvT~G~-~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~-g~~~~~a 272 (326)
T 3b1n_A 203 TGWSED-------EIAS-RVQALIITRGE-HGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEH-GFDWATA 272 (326)
T ss_dssp HCCCHH-------HHHT-TSSEEEEECGG-GCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred CCCCHH-------HHHh-cCCEEEEecCC-CceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHc-CCCHHHH
Confidence 332222 2334 37899999997 888765431 1 59999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHH
Q 022988 235 AELAVSSLQALLQ 247 (289)
Q Consensus 235 ~~~A~a~a~~~l~ 247 (289)
+++|+++++.+++
T Consensus 273 ~~~A~~~aa~~v~ 285 (326)
T 3b1n_A 273 GRLASLMGALKIA 285 (326)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999998765553
No 62
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.71 E-value=1.4e-16 Score=143.04 Aligned_cols=209 Identities=18% Similarity=0.167 Sum_probs=132.8
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCC-----CCCcceeeC-CHHHHHHHHHHHHhCCCcc
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTG-----YPTFKGQVL-NGQQLCDLIEGLEANNLLY 86 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg-----~~~i~g~~l-~~~~~~~~~~~l~~~~~~~ 86 (289)
++|+||+|.|++.+|++|..+++.+++. |.....+.+. ++..+ ..++....+ ..++++.++ . .
T Consensus 57 ~~G~vlvIaGsd~~~GAgilA~~aal~~-Gaglvt~~t~--q~~~~~v~~~~pe~~~~~~~~~~ql~~~~---~-----~ 125 (311)
T 3bgk_A 57 TFGRVLLIGGNYPYGGAIIMAALACVNS-GAGLVTVATH--KDNITALHSHLPEAMAFDMVEKDRLSEQI---T-----A 125 (311)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHHHT-TCSEEEEEEC--GGGHHHHHHHCTTSEEEETTCHHHHHHHH---H-----H
T ss_pred cCCEEEEEECCCCCCCHHHHHHHHHHHh-CcCeEEEEEC--hhhHhHHhhCChhHheeccccHHHHHHHh---c-----c
Confidence 5788999999999999999988888875 6654333322 22211 011111112 123443332 2 2
Q ss_pred cCEEEEee-cC-CHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhh-c-CCceEEcCCHHHHHH
Q 022988 87 YTHLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKV-V-PVASMLTPNQFEAEQ 162 (289)
Q Consensus 87 ~~~v~~G~-l~-~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~l-l-~~~dii~pN~~E~~~ 162 (289)
++++++|+ ++ ++...+.+.++++..+ . ++++|+||.-. .+...+ ..+ + +.+++||||..|++.
T Consensus 126 ~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~g~----~ll~~~------~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 126 ADVVLMGPGLAEDDLAQTTFDVVWQAIE-P--KQTLIIDGSAI----NLLAKR------KPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp CSEEEECTTCCSSHHHHHHHHHHHHHCC-T--TSEEEEETHHH----HHHHHC------C-CCCSCSCEEEECCSCC-CT
T ss_pred CCEEEEcCCCCCCHHHHHHHHHHHHHcC-C--CCeEEEeCChh----hhhccC------hhhcCCCCCEEECCcHHHHHH
Confidence 67889987 55 6666777888887665 3 78999999311 000000 012 3 478999999999999
Q ss_pred hhCCCCCCH-HHH-HHHHHHHHhcCCCeEEEeeeec----CCcEEEecc---cCCCCCchHHHHHHHHHHHccCCCCHHH
Q 022988 163 LTGFRIGSE-ADG-REACKILHAAGPAKVVITSINI----DGNLFLIGS---HQKEKGTGDLMTALLLGWSNKYRDNLDI 233 (289)
Q Consensus 163 L~g~~~~~~-~~~-~~a~~~L~~~g~~~Vvvt~g~~----~G~~~~~~~---~~dt~GAGD~f~g~l~~~l~~~g~~~~~ 233 (289)
|+|.+..+. ++. .+++++|.+ | ..|++|++.. ++.+|.... ..+++|+||+|+|.+++.+++.|.++.+
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~-g-~~VvlkG~~~~i~~~~~~~~~~~~~~~~~t~GtGD~Lag~iaa~lA~~g~~~~e 270 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK-E-TILVAKSHQTKIYQGQKIGHIQVGGPYQATGGMGDTLAGMIAGFVAQFHTDRFE 270 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT-T-CEEEECSSSCEEEETTEEEEECCCCGGGCSTTHHHHHHHHHHHHHHHCCSCHHH
T ss_pred HhCCCCCcchhhHHHHHHHHHhc-C-CEEEEeCCCeEEEECCEEEEECCCCCCCCCCcHHHHHHHHHHHHHHccCCCHHH
Confidence 999877654 466 778888877 5 4677776431 122333221 1578999999988888888732689999
Q ss_pred HHHHHHHHHHHHHHH
Q 022988 234 AAELAVSSLQALLQR 248 (289)
Q Consensus 234 A~~~A~a~a~~~l~~ 248 (289)
|+++|.. .+.+...
T Consensus 271 A~~~A~~-~~~~ag~ 284 (311)
T 3bgk_A 271 VAAAAVF-LHSYIAD 284 (311)
T ss_dssp HHHHHHH-HHHHHHH
T ss_pred HHHHHHH-HHHHHHH
Confidence 9999954 4444433
No 63
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.60 E-value=9.5e-15 Score=128.37 Aligned_cols=155 Identities=14% Similarity=0.100 Sum_probs=106.8
Q ss_pred cCEEEEee-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC-CceEEcCCHHHHHHhh
Q 022988 87 YTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLT 164 (289)
Q Consensus 87 ~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~-~~dii~pN~~E~~~L~ 164 (289)
++++.+|. ++++...+.+..+++.+++. ++|+|+||++.... . ...+.... +++ .+++||||..|++.|+
T Consensus 57 ~dalvi~~G~~~~~~~~~~~~~~~~a~~~--~~pvVlDpv~~~~~-~-~~~~~~~~----ll~~~~~vITPN~~E~~~L~ 128 (265)
T 1v8a_A 57 ADAVVINIGTLDSGWRRSMVKATEIANEL--GKPIVLDPVGAGAT-K-FRTRVSLE----ILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTB-H-HHHHHHHH----HHHHCCSEEEEEHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHc--CCcEEEcCcccccc-c-cCHHHHHH----HHHhCCcEEcCCHHHHHHHh
Confidence 45555543 33666677788888888887 88999999865320 0 11222222 222 3899999999999999
Q ss_pred CCCC-----C----CHHHHHHHHHHHHhcCCCeEEEeeeec----CCcEEEecc--c--CCCCCchHHHHHHHHHHHccC
Q 022988 165 GFRI-----G----SEADGREACKILHAAGPAKVVITSINI----DGNLFLIGS--H--QKEKGTGDLMTALLLGWSNKY 227 (289)
Q Consensus 165 g~~~-----~----~~~~~~~a~~~L~~~g~~~Vvvt~g~~----~G~~~~~~~--~--~dt~GAGD~f~g~l~~~l~~~ 227 (289)
|.+. . +.++..+++++|.+++...|++|+... .+..+.... + .+++|+||+|+|++++++++
T Consensus 129 g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~~d~i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~lA~- 207 (265)
T 1v8a_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAV- 207 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHTT-
T ss_pred CCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCCCcEEEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHHHhc-
Confidence 8652 1 226777889999887767888886421 112222211 1 38999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Q 022988 228 RDNLDIAAELAVSSLQALLQRTVN 251 (289)
Q Consensus 228 g~~~~~A~~~A~a~a~~~l~~~~~ 251 (289)
|.+ .+|+..|..+-..+-+...+
T Consensus 208 g~~-~~Aa~~a~~~~~~Ag~~a~~ 230 (265)
T 1v8a_A 208 TEP-LKATTSALVTFGIAAEKAYE 230 (265)
T ss_dssp SCH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHH
Confidence 999 99999888777667666654
No 64
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.57 E-value=4.9e-14 Score=123.82 Aligned_cols=154 Identities=19% Similarity=0.132 Sum_probs=109.5
Q ss_pred EEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCC
Q 022988 89 HLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (289)
Q Consensus 89 ~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~ 168 (289)
+|.+|.+ ++...+.+..+++.+++. ++|+|+||+..... . ...+..+.+.+ ..+++|+||..|++.|+|...
T Consensus 63 vIn~G~l-~~~~~~~~~~a~~~a~~~--~~PvVlDPVg~gas-~-~r~~~~~~Ll~---~~~~VItpN~~E~~~L~g~~~ 134 (273)
T 3dzv_A 63 VLNLGHL-SQEREQSLLAASDYARQV--NKLTVVDLVGYGAS-D-IRNEVGEKLVH---NQPTVVKGNLSEMRTFCQLVS 134 (273)
T ss_dssp EEECCSC-CHHHHHHHHHHHHHHHHT--TCCEEEECTTTTSC-H-HHHHHHHHHHH---TCCSEEEEEHHHHHHHTTCCC
T ss_pred EEecCCC-ChHHHHHHHHHHHHHHHc--CCcEEEchhhcCCc-c-cCHHHHHHHHh---cCCcEECCCHHHHHHHhCCcc
Confidence 3455665 455677888888889887 88999999876321 1 22333333321 378999999999999999764
Q ss_pred C-----C------HH---HHHHHHHHHHhcCC-CeEEEeeeec---C-CcEEEec-c-c--CCCCCchHHHHHHHHHHHc
Q 022988 169 G-----S------EA---DGREACKILHAAGP-AKVVITSINI---D-GNLFLIG-S-H--QKEKGTGDLMTALLLGWSN 225 (289)
Q Consensus 169 ~-----~------~~---~~~~a~~~L~~~g~-~~Vvvt~g~~---~-G~~~~~~-~-~--~dt~GAGD~f~g~l~~~l~ 225 (289)
. + .+ +..+++++|.+++. ..|++|+..+ + +..+... + + ..++|+||+|+|+++++++
T Consensus 135 ~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~D~i~dg~~~~~~~~G~~~~~~v~GtGc~Ls~~Iaa~lA 214 (273)
T 3dzv_A 135 HGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIVLQNGVPELDCFTGTGDLVGALVAALLG 214 (273)
T ss_dssp C-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSSEEEECSSCEEEECCCCGGGGSSTTHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCeeEEEcCCEEEEeCCCCcccCCcCCchHHHHHHHHHHHh
Confidence 2 1 13 56678888887666 7899998631 1 1222221 1 2 3469999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHH
Q 022988 226 KYRDNLDIAAELAVSSLQALLQRTVN 251 (289)
Q Consensus 226 ~~g~~~~~A~~~A~a~a~~~l~~~~~ 251 (289)
+ |.++.+|+..|..+-..+-+...+
T Consensus 215 ~-g~~~~~Aa~~A~~~~~~Age~A~~ 239 (273)
T 3dzv_A 215 E-GNAPMTAAVAAVSYFNLCGEKAKT 239 (273)
T ss_dssp H-TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9 999999999999887777776654
No 65
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.55 E-value=3.1e-15 Score=134.07 Aligned_cols=182 Identities=12% Similarity=0.100 Sum_probs=114.1
Q ss_pred cCccchhh---cHHHHHhCCCcceeeceEEeecCCCCCCc---cee-----eCCHHHHHHHHHHHHhCCC-cccCEEEEe
Q 022988 26 QGYVGNKS---AVFPLQLLGYDVDPIHSVQFSNHTGYPTF---KGQ-----VLNGQQLCDLIEGLEANNL-LYYTHLLTG 93 (289)
Q Consensus 26 ~G~vG~~~---~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i---~g~-----~l~~~~~~~~~~~l~~~~~-~~~~~v~~G 93 (289)
+|.+|.|. ....|++.||+++++.... ..+|+...+ .|. ...+. . .+. .++ -.++.+.++
T Consensus 76 i~~vG~D~G~~i~~~L~~~gV~~~~v~~~~-~~~T~~~~~~~~~g~r~~~~~~ga~---~---~~~-~~l~~~~~~v~~~ 147 (306)
T 3bf5_A 76 YSAVGMKTHREYLAMIESMGINTGHVEKFE-DESGPICYIATDGKKQVSFMHQGAM---A---AWA-PQLADEYEYVHFS 147 (306)
T ss_dssp EEEEETTTCHHHHHHHHHTTCCCTTEEEET-TCCCSEEEEEECSSCEEEEEECTHH---H---HCC-CCCCSCEEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHcCCCchheEecC-CCCCceEEEEEcCCeeEEEEeCChh---h---hhh-HhhcCCCCEEEEC
Confidence 46667663 3345889999988764332 123432111 011 11111 1 111 111 135666554
Q ss_pred ecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCHHH
Q 022988 94 YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEAD 173 (289)
Q Consensus 94 ~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~~~ 173 (289)
... .+.++++.++ . ++++||+++.. . .. .+.+.+ +++++|+++||+.|++.|+|....+..
T Consensus 148 ~~~------~~~~~~~~a~----~-~v~~D~~~~~~--~-~~---~~~~~~-~l~~~dil~~N~~E~~~l~g~~~~~~~- 208 (306)
T 3bf5_A 148 TGP------NYLDMAKSIR----S-KIIFDPSQEIH--K-YS---KDELKK-FHEISYMSIFNDHEYRVFREMTGLSSP- 208 (306)
T ss_dssp SSS------SHHHHHHHCC----S-EEEECCGGGGG--G-SC---HHHHHH-HHHHCSEEEEEHHHHHHHHHHHCCSSC-
T ss_pred ChH------HHHHHHHHhC----C-cEEEcCchhhh--h-cc---HHHHHH-HHhcCCEEEcCHHHHHHHhCCCCcCcc-
Confidence 322 4556666654 3 89999985321 1 11 223333 778999999999999999885322110
Q ss_pred HHHHHHHHHhcCCCeEEEeeeecCCcEEEecc----------cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 022988 174 GREACKILHAAGPAKVVITSINIDGNLFLIGS----------HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQ 243 (289)
Q Consensus 174 ~~~a~~~L~~~g~~~Vvvt~g~~~G~~~~~~~----------~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~ 243 (289)
+| .|++|+|+ +|++++..+ .+||+||||+|+|+|+++|.+ |+++++|+++|++++.
T Consensus 209 ------~l------~vvvT~G~-~Ga~~~~~~~~~~~~~~~v~vDttGAGDaF~ag~~~~l~~-g~~~~~a~~~A~~~aa 274 (306)
T 3bf5_A 209 ------KV------TTIVTNGE-RGSSLFMDGKKYDFPAIPSSGDTVGAGDSFRAGLYLALYN-RRSIEKGMIYGTIIAH 274 (306)
T ss_dssp ------SS------CEEEEEGG-GEEEEEETTEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred ------cE------EEEEeecc-cCeEEEeCCcEEEecCCcCCCCCCCccHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 11 19999997 787765432 169999999999999999998 9999999999999987
Q ss_pred HHHHH
Q 022988 244 ALLQR 248 (289)
Q Consensus 244 ~~l~~ 248 (289)
.++++
T Consensus 275 ~~v~~ 279 (306)
T 3bf5_A 275 HVIDD 279 (306)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 77655
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.49 E-value=3.3e-13 Score=128.29 Aligned_cols=206 Identities=17% Similarity=0.182 Sum_probs=122.8
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecC----CCCCCcc-------eeeCCHHHHHHHHHHHHh
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNH----TGYPTFK-------GQVLNGQQLCDLIEGLEA 81 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~----tg~~~i~-------g~~l~~~~~~~~~~~l~~ 81 (289)
++|+|++|+|+..++++..-+....++ .|.....+.+.. +.. +...+.. ...+++++++.+.+.+.
T Consensus 243 ~~G~vlvigGs~~~~GA~~Laa~aAlr-~GaGlv~~~~~~-~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~~~~- 319 (502)
T 3rss_A 243 TYGKVLIIAGSRLYSGAPVLSGMGSLK-VGTGLVKLAVPF-PQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSK- 319 (502)
T ss_dssp GGCEEEEECCCSSCCSHHHHHHHHHHH-TTCSEEEEEEET-TTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHHHHT-
T ss_pred CCceEEEEECCCCCCCHHHHHHHHHHH-hCcCeEEEEEcH-HHHHHHhhcCCeEEEecccccccccchhhHHHHHHHhc-
Confidence 478899999998776666554444453 555444332211 000 0011110 01234445555555444
Q ss_pred CCCcccCEEEEee-cCC-HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH
Q 022988 82 NNLLYYTHLLTGY-IGS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (289)
Q Consensus 82 ~~~~~~~~v~~G~-l~~-~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E 159 (289)
.++++.+|. ++. +...+.+.++ +++. ++|+|+||.... +..+ +.+ + ..+..++||||..|
T Consensus 320 ----~~davviGpGlg~~~~~~~~~~~~---l~~~--~~pvVlDadgl~----~l~~---~ll-~-~~~~~~vlTPN~~E 381 (502)
T 3rss_A 320 ----DVDVVAIGPGLGNNEHVREFVNEF---LKTL--EKPAVIDADAIN----VLDT---SVL-K-ERKSPAVLTPHPGE 381 (502)
T ss_dssp ----TCSEEEECTTCCCSHHHHHHHHHH---HHHC--CSCEEECHHHHH----TCCH---HHH-H-HCSSCEEECCCHHH
T ss_pred ----cCCEEEEeCCCCCCHHHHHHHHHH---HHhc--CCCEEEeCcccc----hhcH---HHH-h-ccCCCEEEeCCHHH
Confidence 367888875 443 3333334433 3444 789999995432 1221 112 1 24568999999999
Q ss_pred HHHhhCCCCCCH-HHHHHHHHHHHhcCCCeEEEeeeec---C-CcEEEec--c-cCCCCCchHHHHHHHHHHHccCCCCH
Q 022988 160 AEQLTGFRIGSE-ADGREACKILHAAGPAKVVITSINI---D-GNLFLIG--S-HQKEKGTGDLMTALLLGWSNKYRDNL 231 (289)
Q Consensus 160 ~~~L~g~~~~~~-~~~~~a~~~L~~~g~~~Vvvt~g~~---~-G~~~~~~--~-~~dt~GAGD~f~g~l~~~l~~~g~~~ 231 (289)
++.|+|.+..+. ++ .+++++|.+++...|++|+... + +..|... . ..+++|+||+|+|.+++.+++ |.++
T Consensus 382 ~~~L~g~~~~~~~~d-~~aa~~la~~~~~~VvlKG~~~vi~~~~~~~~~~~g~~~~at~GsGD~Lag~iaa~lA~-g~~~ 459 (502)
T 3rss_A 382 MARLVKKTVGDVKYN-YELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQ-GLSP 459 (502)
T ss_dssp HHHHHTCCHHHHTTC-HHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCCGGGSSTTHHHHHHHHHHHHHHT-TCCH
T ss_pred HHHHhCCCccchHHH-HHHHHHHHHHcCCEEEEeCCCeEEEcCCEEEEECCCCCccccCCchHHHHHHHHHHHhC-CCCH
Confidence 999999865322 34 6678888765444666666421 1 1222222 1 257899999999999999998 9999
Q ss_pred HHHHHHHHHH
Q 022988 232 DIAAELAVSS 241 (289)
Q Consensus 232 ~~A~~~A~a~ 241 (289)
.+|++.|+..
T Consensus 460 ~~Aa~~A~~~ 469 (502)
T 3rss_A 460 LEASTVSVYL 469 (502)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988644
No 67
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.43 E-value=7.2e-13 Score=116.94 Aligned_cols=207 Identities=17% Similarity=0.112 Sum_probs=119.8
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeec----CCCCCCcceeeCCHHHHHHHHHHHHhCCCcccC
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSN----HTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYT 88 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~----~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~ 88 (289)
++|+|++|+|+..+.++..-+....+ +.|.....+.+.. +. .+...+. ...+...+.. .... ..-.+|
T Consensus 29 ~~G~vlvigGs~~~~GA~~laa~aAl-r~GaGlv~~~~~~-~~~~~~~~~~Pe~--m~~~~~~~~~---~~~~-~l~~~d 100 (279)
T 3rpz_A 29 TYGTALLLAGSDDMPGAALLAGLGAM-RSGLGKLVIGTSE-NVIPLIVPVLPEA--TYWRDGWKKA---ADAQ-LEETYR 100 (279)
T ss_dssp GGCEEEEECCBTTBCHHHHHHHHHHH-TTTCSEEEEEECT-TTHHHHTTTCTTC--EEEETHHHHT---TTSC-CSSCCS
T ss_pred CCCEEEEEeCCCCCCcHHHHHHHHHH-HhCCCeEEEEecH-HHHHHHHhcCCee--EEccccccch---hhHh-hccCCC
Confidence 57889999999866555443333333 4555443332211 00 1111111 1111111110 0111 111478
Q ss_pred EEEEee-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCC
Q 022988 89 HLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (289)
Q Consensus 89 ~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~ 167 (289)
++.+|. ++.. +...++++.+.+. +.++|+|+. +. ... .+ ...+..++||||..|+++|+|.+
T Consensus 101 avviGPGlg~~---~~~~~~~~~~l~~--~~p~VlDAd----al-~~~-----~l--~~~~~~~vlTPN~~E~~~L~g~~ 163 (279)
T 3rpz_A 101 AIAIGPGLPQT---ESVQQAVDHVLTA--DCPVILDAG----AL-AKR-----TY--PKREGPVILTPHPGEFFRMTGVP 163 (279)
T ss_dssp EEEECTTCCCC---HHHHHHHHHHTTS--SSCEEECGG----GC-CSC-----CC--CCCSSCEEECCCHHHHHHHHCCC
T ss_pred EEEECCCCCCC---HHHHHHHHHHHhh--CCCEEEECC----cc-chh-----hh--hhccCCEEEecCHHHHHHHhCCC
Confidence 888885 3332 2334455566555 679999983 21 110 00 01246799999999999999986
Q ss_pred CCCH-HHHHHHHHHHHhcCCCeEEEeeeec-----CCcEEEecc---cCCCCCchHHHHHHHHHHHccCCCCHHHHHHHH
Q 022988 168 IGSE-ADGREACKILHAAGPAKVVITSINI-----DGNLFLIGS---HQKEKGTGDLMTALLLGWSNKYRDNLDIAAELA 238 (289)
Q Consensus 168 ~~~~-~~~~~a~~~L~~~g~~~Vvvt~g~~-----~G~~~~~~~---~~dt~GAGD~f~g~l~~~l~~~g~~~~~A~~~A 238 (289)
+.+. ++..+++++|.+++...|++|++.. +|.++.... ...++|+||+|+|.+++.+++ |.++.+|++.|
T Consensus 164 ~~~~~~d~~~aa~~la~~~~~~VvlKG~~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~-g~~~~~A~~~a 242 (279)
T 3rpz_A 164 VNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCC-HEDPKHAVLNA 242 (279)
T ss_dssp HHHHTTSHHHHHHHHHHHHTSEEEECSTTCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHH-CSSHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHcCeEEEEeCCCcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHC-CCCHHHHHHHH
Confidence 5432 4566778888765445777777531 233443321 257899999999999999999 99999999998
Q ss_pred HHHHHHHH
Q 022988 239 VSSLQALL 246 (289)
Q Consensus 239 ~a~a~~~l 246 (289)
. +.+...
T Consensus 243 ~-~lh~~A 249 (279)
T 3rpz_A 243 V-YLHGAC 249 (279)
T ss_dssp H-HHHHHH
T ss_pred H-HHHHHH
Confidence 6 444433
No 68
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.30 E-value=2.8e-11 Score=105.56 Aligned_cols=152 Identities=16% Similarity=0.143 Sum_probs=97.9
Q ss_pred EEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCC-
Q 022988 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI- 168 (289)
Q Consensus 90 v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~- 168 (289)
+.+|.+ ++...+.+..+.+.+++. ++|+|+||+-.... . ...+.. ++.+-.++++|+||..|+..|.|...
T Consensus 62 iNiGtl-~~~~~~~m~~A~~~A~~~--~~PvVLDPVg~gas-~-~R~~~~---~~ll~~~~~vIrgN~sEi~~L~g~~~~ 133 (265)
T 3hpd_A 62 INIGTL-DSGWRRSMVKATEIANEL--GKPIVLDPVGAGAT-K-FRTRVS---LEILSRGVDVLKGNFGEISALLGEEGK 133 (265)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTB-H-HHHHHH---HHHHHHCCSEEEEEHHHHHHHHHHHC-
T ss_pred EECCCC-ChHHHHHHHHHHHHHHHc--CCCEEEcCCCCCCc-H-HHHHHH---HHHHhcCCcEEcCCHHHHHHHhcccCC
Confidence 444544 556677888888999988 99999999865310 1 112222 22122378999999999999997432
Q ss_pred --------CCHHHHHHHHHHHHhcCCCeEEEeeeec---CC-cEE-Eec-cc-C-CCCCchHHHHHHHHHHHccCCCCHH
Q 022988 169 --------GSEADGREACKILHAAGPAKVVITSINI---DG-NLF-LIG-SH-Q-KEKGTGDLMTALLLGWSNKYRDNLD 232 (289)
Q Consensus 169 --------~~~~~~~~a~~~L~~~g~~~Vvvt~g~~---~G-~~~-~~~-~~-~-dt~GAGD~f~g~l~~~l~~~g~~~~ 232 (289)
.+.++..++++.+.++....|++|+..+ +| ..| ... .+ . ..+|+||+++|.+++++++ +. ..
T Consensus 134 ~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~lA~-~~-~~ 211 (265)
T 3hpd_A 134 TRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAV-TE-PL 211 (265)
T ss_dssp ---------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHTT-SC-HH
T ss_pred CCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCCeEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHHHhc-CC-hH
Confidence 1346777888888776556788887431 11 122 222 22 2 2489999999999999998 75 45
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 022988 233 IAAELAVSSLQALLQRTVN 251 (289)
Q Consensus 233 ~A~~~A~a~a~~~l~~~~~ 251 (289)
+|+..|...-..+-+...+
T Consensus 212 ~Aa~~a~~~~g~Age~Aa~ 230 (265)
T 3hpd_A 212 KATTSALVTFGIAAEKAYE 230 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6666666554444444433
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.29 E-value=2.8e-11 Score=115.93 Aligned_cols=150 Identities=17% Similarity=0.077 Sum_probs=102.3
Q ss_pred EEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC--CceEEcCCHHHHHHhhCCC
Q 022988 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQLTGFR 167 (289)
Q Consensus 90 v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~--~~dii~pN~~E~~~L~g~~ 167 (289)
|.+|++.+ .+.+..+++.+++. ++|+|+||+.... .....+..+ .+++ .+++||||..|+..|+|..
T Consensus 312 in~G~l~~---~~~~~~a~~~a~~~--~~PvVlDPVg~~a-----~~~r~~~~~-~Ll~~~~~~vItpN~~E~~~L~g~~ 380 (540)
T 3nl6_A 312 LNTGSVAP---PEMLKAAIRAYNDV--KRPIVFDPVGYSA-----TETRLLLNN-KLLTFGQFSCIKGNSSEILGLAELN 380 (540)
T ss_dssp EESSCSCC---HHHHHHHHHHHHTT--TCCEEEECTTCTT-----SHHHHHHHH-HHTTSCCCSEEEECHHHHHHHTTC-
T ss_pred EeCCCCCH---HHHHHHHHHHHHHc--CCCEEEChHHhhc-----ccccHHHHH-HHHhhCCCeEECCCHHHHHHHhCCC
Confidence 44466544 77788888888887 8899999987532 111112222 3666 7899999999999999975
Q ss_pred C------C-----CHHHHHHHHHHHHhcCCCeEEEeeeec---CC--------------------cEEEe-c-c-c--CC
Q 022988 168 I------G-----SEADGREACKILHAAGPAKVVITSINI---DG--------------------NLFLI-G-S-H--QK 208 (289)
Q Consensus 168 ~------~-----~~~~~~~a~~~L~~~g~~~Vvvt~g~~---~G--------------------~~~~~-~-~-~--~d 208 (289)
. . +.++..+++++|.+++...|++|+..+ +| ..|.. . . + ..
T Consensus 381 ~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~m~~ 460 (540)
T 3nl6_A 381 KERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGD 460 (540)
T ss_dssp -------------CCHHHHHHHHHHHHHTTSEEEECSSSEEEEECCGGGBCCSSSCCSSCCTTSSCEEEEECSCCGGGGS
T ss_pred cccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCCeEEECCCccccccccccccccccCCccEEEECCCChhhccC
Confidence 3 1 125677888888876667888887421 12 23322 2 2 2 24
Q ss_pred CCCchHHHHHHHHHHHccCCC---CHHHHHHHHHHHHHHHHHHHHH
Q 022988 209 EKGTGDLMTALLLGWSNKYRD---NLDIAAELAVSSLQALLQRTVN 251 (289)
Q Consensus 209 t~GAGD~f~g~l~~~l~~~g~---~~~~A~~~A~a~a~~~l~~~~~ 251 (289)
++|+||+++|.+++++++ +. +..+|+..|...-..+-+...+
T Consensus 461 vtGtGc~Lsg~Iaa~la~-~~~~~~~~~Aa~~a~~~~~~Ag~~A~~ 505 (540)
T 3nl6_A 461 ITASGCSLGSTIACMIGG-QPSEGNLFHAVVAGVMLYKAAGKIASE 505 (540)
T ss_dssp STTHHHHHHHHHHHHHHT-CCTTCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999998 87 6888888887665555554443
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=98.88 E-value=5e-09 Score=98.80 Aligned_cols=133 Identities=17% Similarity=0.179 Sum_probs=87.9
Q ss_pred ccCEEEEee-cCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 86 YYTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 86 ~~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
.++++.+|. +..... + +.+++ +. + |+|+|.- + ++. ++ +. ..++...|||||..|+++|+
T Consensus 292 ~~~a~~iGPGlG~~~~-~-l~~~l----~~--~-p~VlDAD----a-L~~-~~----~~-~~~~~~~VlTPh~~E~~rL~ 351 (475)
T 3k5w_A 292 LLSAFALGMGLENIPK-D-FNRWL----EL--A-PCVLDAG----V-FYH-KE----IL-QALEKEAVLTPHPKEFLSLL 351 (475)
T ss_dssp SCSEEEECTTCSSCCT-T-HHHHH----HH--S-CEEEEGG----G-GGS-GG----GG-TTTTSSEEEECCHHHHHHHH
T ss_pred CCCEEEEcCCCCCCHH-H-HHHHH----hc--C-CEEEECc----c-cCC-ch----hh-hccCCCEEECCCHHHHHHHh
Confidence 378899986 443322 3 44444 23 5 8999982 2 111 11 11 14456799999999999999
Q ss_pred CC-----CCCCH-HHHHHHHHHHHhcC-CCeEEEeeeec----CCcEEEecc--c-CCCCCchHHHHHHHHHHHccCCCC
Q 022988 165 GF-----RIGSE-ADGREACKILHAAG-PAKVVITSINI----DGNLFLIGS--H-QKEKGTGDLMTALLLGWSNKYRDN 230 (289)
Q Consensus 165 g~-----~~~~~-~~~~~a~~~L~~~g-~~~Vvvt~g~~----~G~~~~~~~--~-~dt~GAGD~f~g~l~~~l~~~g~~ 230 (289)
|. +..+. ++..+++++|.+++ ...|++|++.. .+..|+... + ..++|+||+++|.+++.+++ |.+
T Consensus 352 g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~vI~~~~~~~~~~~g~~~mat~GtGdvLsg~Iaa~lA~-g~~ 430 (475)
T 3k5w_A 352 NLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFINILGSVALAKAGSGDVLAGLILSLLSQ-NYT 430 (475)
T ss_dssp HHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEEEEETTEEEEECCCCGGGCSTTHHHHHHHHHHHHHHT-TCC
T ss_pred CCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 86 44332 45567788887765 66888988641 233444322 2 46899999999999999999 999
Q ss_pred HHHHHHHHH
Q 022988 231 LDIAAELAV 239 (289)
Q Consensus 231 ~~~A~~~A~ 239 (289)
+.+|+..|.
T Consensus 431 ~~~Aa~~a~ 439 (475)
T 3k5w_A 431 PLDAAINAS 439 (475)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988754
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=84.30 E-value=3.6 Score=38.26 Aligned_cols=110 Identities=8% Similarity=0.121 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEee--cCC--------HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhH
Q 022988 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGS--------VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSEL 138 (289)
Q Consensus 70 ~~~~~~~~~l~~~~~~~~~-~v~~G~--l~~--------~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~ 138 (289)
+++...++.+.. .+| +|++|+ +.. +...+.+.+.++.++. ++++|-|.-.. +.+.+.
T Consensus 224 e~f~~~l~e~~~----~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~--~~~~iH~E~As------~~~~~l 291 (474)
T 3drw_A 224 EDIKPFLGEIGK----EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKE--KDVKIHVEFAS------VQDRKL 291 (474)
T ss_dssp TTTGGGHHHHHH----HCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH--TTCEEEEECCC------CSCHHH
T ss_pred HHHHHHHHHhhc----CCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcC--CCCeEEEEeCc------cccHHH
Confidence 455555555542 255 467775 333 2233444456666653 48888876532 246677
Q ss_pred HHHHHHhhcCCceEEcCCHHHHHHhhCC-----------CCCCHHHHHHHHHHHHh-cCCCeEEE
Q 022988 139 VSVYREKVVPVASMLTPNQFEAEQLTGF-----------RIGSEADGREACKILHA-AGPAKVVI 191 (289)
Q Consensus 139 ~~~l~~~ll~~~dii~pN~~E~~~L~g~-----------~~~~~~~~~~a~~~L~~-~g~~~Vvv 191 (289)
.+.+...++|.+|.+-.|+.|+..+.+. ...+.+++.++++.|++ .+.+.|.+
T Consensus 292 ~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~ll~~~~l~rIhv 356 (474)
T 3drw_A 292 RKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMIILDELNFEILQV 356 (474)
T ss_dssp HHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 7777767999999999999999988763 11234567777777764 56655444
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=73.32 E-value=18 Score=33.50 Aligned_cols=112 Identities=12% Similarity=0.146 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEee--cCC----Hh-HHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhHHH
Q 022988 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGS----VS-FLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVS 140 (289)
Q Consensus 70 ~~~~~~~~~l~~~~~~~~~-~v~~G~--l~~----~~-~~~~~~~~l~~~k~-~~~~~~vv~Dp~~~~~g~~~~~~~~~~ 140 (289)
+++...++.+.. .+| +|++|+ +.. ++ ..+.+.++.+.++. .++++++-|.-.. +.+.+...
T Consensus 221 e~f~~~l~e~~~----~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As------~~~~~l~~ 290 (467)
T 1gc5_A 221 REFREGFEEITR----NVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAY------TANRRVRE 290 (467)
T ss_dssp HHHHHSHHHHHT----TCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCC------CCCHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEECC------cccHHHHH
Confidence 455555555332 366 467775 333 23 33344444444444 3458888776532 24567777
Q ss_pred HHHHhhcCCceEEcCCHHHHHHhh---CCCC-------CCHHHHHHHHHHHHh-cCCCeEEEe
Q 022988 141 VYREKVVPVASMLTPNQFEAEQLT---GFRI-------GSEADGREACKILHA-AGPAKVVIT 192 (289)
Q Consensus 141 ~l~~~ll~~~dii~pN~~E~~~L~---g~~~-------~~~~~~~~a~~~L~~-~g~~~Vvvt 192 (289)
.+. .++|++|.+-.|+.|+..|+ |.+. .+..++.+++..|++ .+...|.+-
T Consensus 291 ~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~~l~rIhvH 352 (467)
T 1gc5_A 291 ALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETGIERIHFH 352 (467)
T ss_dssp HHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHH-hhccccccCccCHHHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 777 69999999999999998544 3220 114555566666654 466655553
No 73
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=69.59 E-value=43 Score=28.33 Aligned_cols=107 Identities=13% Similarity=0.141 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhCCCcccCEEEEeecCCHh-H-------HHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHH
Q 022988 69 GQQLCDLIEGLEANNLLYYTHLLTGYIGSVS-F-------LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS 140 (289)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~~-~-------~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~ 140 (289)
.+...++.+.+.+.. +++|+.++.-... + .+-+..+.+.+++. |++++.+| +++...+
T Consensus 36 ~e~a~~~a~~l~~~G---a~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~---------~d~~~~~ 101 (262)
T 1zco_A 36 REQIMKVAEFLAEVG---IKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEV---------MDTRHVE 101 (262)
T ss_dssp HHHHHHHHHHHHHTT---CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------CCGGGHH
T ss_pred HHHHHHHHHHHHHcC---CCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEee---------CCHHhHH
Confidence 455555666666653 5667666542111 1 44455555556666 99999988 3444445
Q ss_pred HHHHhhcCCceEEcCCHHHH------HHh--hCCCC------C-CHHHHHHHHHHHHhcCCCeEEEee
Q 022988 141 VYREKVVPVASMLTPNQFEA------EQL--TGFRI------G-SEADGREACKILHAAGPAKVVITS 193 (289)
Q Consensus 141 ~l~~~ll~~~dii~pN~~E~------~~L--~g~~~------~-~~~~~~~a~~~L~~~g~~~Vvvt~ 193 (289)
.+.+ + +|++.....+. +.+ +|.++ . +.+++..+++.+...|.+.+++..
T Consensus 102 ~l~~-~---vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 102 LVAK-Y---SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp HHHH-H---CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HHHh-h---CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 4433 2 67775544432 222 34442 2 678999999999988887666654
No 74
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=67.58 E-value=77 Score=29.21 Aligned_cols=110 Identities=9% Similarity=0.043 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHhCCCcccC-EEEEee--cCC---HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHH
Q 022988 70 QQLCDLIEGLEANNLLYYT-HLLTGY--IGS---VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (289)
Q Consensus 70 ~~~~~~~~~l~~~~~~~~~-~v~~G~--l~~---~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~ 143 (289)
+++...++.+.. ++| +|++|+ +.. +...+...+-++.++. +++++-|.-.. +.+.+..+.+.
T Consensus 216 e~f~~~l~e~~~----~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~--~~~~iH~E~As------~~~~~l~~~i~ 283 (457)
T 1l2l_A 216 EEWIERFEEIAK----RSELAIISGLHPLTQENHGKPIKLVREHLKILND--LGIRAHLEFAF------TPDEVVRLEIV 283 (457)
T ss_dssp HHHHHSHHHHHT----TCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHH--TTCEEEEECCC------CSSHHHHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEeccccccccchhhhHHHHHHHHHHhcC--CCCeEEEEECC------cccHHHHHHHH
Confidence 455555555332 366 577786 444 2222323333334433 48888776532 24667777777
Q ss_pred HhhcCCceEEcCCHHHHHHh---hCCC----------CCCHHHHHHHHHHHHh-cCCCeEEEe
Q 022988 144 EKVVPVASMLTPNQFEAEQL---TGFR----------IGSEADGREACKILHA-AGPAKVVIT 192 (289)
Q Consensus 144 ~~ll~~~dii~pN~~E~~~L---~g~~----------~~~~~~~~~a~~~L~~-~g~~~Vvvt 192 (289)
.++|++|.+-.|+.|+..| .|-+ ..+..++.+++.+|++ .+...|.+-
T Consensus 284 -~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~~l~rIhvH 345 (457)
T 1l2l_A 284 -KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKRIHFH 345 (457)
T ss_dssp -HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred -hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 6999999999999999875 3311 1224556666667664 576655553
No 75
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=65.42 E-value=34 Score=31.54 Aligned_cols=98 Identities=11% Similarity=0.094 Sum_probs=60.2
Q ss_pred cCE-EEEee--cCCH---hHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHH
Q 022988 87 YTH-LLTGY--IGSV---SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEA 160 (289)
Q Consensus 87 ~~~-v~~G~--l~~~---~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~ 160 (289)
+|+ +++|+ ++.. ...+...+-++.++ +++.++-|+.... .+.+..+.+. .++|++|.+-.|+.|+
T Consensus 226 ~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~--~~~~~iH~ElAs~------~~~~~~~~i~-~ilp~vDSlGmNE~EL 296 (455)
T 1ua4_A 226 VQLAILSGLQALTKENYKEPFEIVKSNLEVLN--EREIPVHLEFAFT------PDEKVREEIL-NVLGMFYSVGLNEVEL 296 (455)
T ss_dssp CSEEEECCGGGCCTTTCHHHHHHHHHHHHHHH--HTTCCEEEECCCC------CCHHHHHHHH-HHGGGCSEEEECHHHH
T ss_pred CcEEEEechhcccccchHHHHHHHHHHHHHhc--CCCceEEEEeCCc------cCHHHHHHHH-hhhccCcccccCHHHH
Confidence 664 66675 4442 22333333233443 3588898887432 4566666666 6999999999999999
Q ss_pred HHhhCC--------CC-----CCHHHHHHHHHHHHh-cCCCeEEEee
Q 022988 161 EQLTGF--------RI-----GSEADGREACKILHA-AGPAKVVITS 193 (289)
Q Consensus 161 ~~L~g~--------~~-----~~~~~~~~a~~~L~~-~g~~~Vvvt~ 193 (289)
..+.+. .+ .+..++.+++.+|++ .+...|.+-.
T Consensus 297 ~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~l~rihvHT 343 (455)
T 1ua4_A 297 ASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRIHFHT 343 (455)
T ss_dssp HHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHhCCCccccccccCCccCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 887543 10 125666677777764 5666655543
No 76
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=58.08 E-value=78 Score=26.96 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH------HHHh--hCCCC-----
Q 022988 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFRI----- 168 (289)
Q Consensus 102 ~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E------~~~L--~g~~~----- 168 (289)
+-+..+.+.+++. |++++.+| +++..++.+.+ + +|+++.-..+ ++.+ +|.++
T Consensus 89 ~gl~~l~~~~~~~--Gl~~~te~---------~d~~~~~~l~~-~---vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G 153 (276)
T 1vs1_A 89 EGLKLLRRAGDEA--GLPVVTEV---------LDPRHVETVSR-Y---ADMLQIGARNMQNFPLLREVGRSGKPVLLKRG 153 (276)
T ss_dssp HHHHHHHHHHHHH--TCCEEEEC---------CCGGGHHHHHH-H---CSEEEECGGGTTCHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHc--CCcEEEec---------CCHHHHHHHHH-h---CCeEEECcccccCHHHHHHHHccCCeEEEcCC
Confidence 4444455556666 99998888 44455555443 3 5666433322 2222 35553
Q ss_pred -C-CHHHHHHHHHHHHhcCCCeEEEee
Q 022988 169 -G-SEADGREACKILHAAGPAKVVITS 193 (289)
Q Consensus 169 -~-~~~~~~~a~~~L~~~g~~~Vvvt~ 193 (289)
. +.+++..+++.+...|.+.+++..
T Consensus 154 ~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 154 FGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp TTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 2 678999999999988987777765
No 77
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=57.67 E-value=79 Score=27.17 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=42.7
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEEeecCCH--hHHHHHHHHHHHHHhcCCCceEEEccccc
Q 022988 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (289)
Q Consensus 66 ~l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~--~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~ 127 (289)
..++++++.+.+++....-...|.|..|.|..+ ...+.+.++++.++ +..+.|.+.+-
T Consensus 104 ~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD 163 (287)
T 3iwp_A 104 LYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFD 163 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGG
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchh
Confidence 356788888877776543335789999988655 66778888888775 56899998653
No 78
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=56.10 E-value=1.1e+02 Score=27.34 Aligned_cols=108 Identities=11% Similarity=0.099 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEeecCC--------HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHH
Q 022988 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGS--------VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (289)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~--------~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~ 139 (289)
+.+...+..+.+.+.. +++|+.+..-+ +...+.+..+.+.+++. |++++.+| .++..+
T Consensus 154 s~e~a~~~a~~~k~aG---a~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~---------~d~~~~ 219 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKG---LKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEI---------VTPADI 219 (385)
T ss_dssp CHHHHHHHHHHHHHTT---CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------CSGGGH
T ss_pred CHHHHHHHHHHHHHcC---CCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEec---------CCHHHH
Confidence 4556666666666654 56776664210 12245555555666666 99999998 444444
Q ss_pred HHHHHhhcCCceEEcCCHHH------HHHh--hCCCC-------CCHHHHHHHHHHHHhcCCCeEEEee
Q 022988 140 SVYREKVVPVASMLTPNQFE------AEQL--TGFRI-------GSEADGREACKILHAAGPAKVVITS 193 (289)
Q Consensus 140 ~~l~~~ll~~~dii~pN~~E------~~~L--~g~~~-------~~~~~~~~a~~~L~~~g~~~Vvvt~ 193 (289)
+. +...+|++.....+ ++.+ +|.++ .+.+++..+++.+.+.|.+.|++..
T Consensus 220 ~~----l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 220 EV----ALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp HH----HTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HH----HHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 43 33457888655444 2222 23332 4678999999999988987666655
No 79
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=55.58 E-value=86 Score=27.75 Aligned_cols=107 Identities=10% Similarity=0.029 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEeecCCHh--------HHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHH
Q 022988 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (289)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~~--------~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~ 139 (289)
+.+...+..+.+.+.. .++++.+..-+.. ..+-+..+.+.+++. |++++.+| +++..+
T Consensus 118 s~e~a~~~a~~~k~aG---a~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~---------~d~~~~ 183 (350)
T 1vr6_A 118 GREMLMETAHFLSELG---VKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEA---------LGEDDL 183 (350)
T ss_dssp CHHHHHHHHHHHHHTT---CCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------SSGGGH
T ss_pred CHHHHHHHHHHHHHcC---CCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEe---------CCHHHH
Confidence 3455566666666543 4555554322111 134444455556666 99999888 444555
Q ss_pred HHHHHhhcCCceEEcC------CHHHHHHhh--CCCC------C-CHHHHHHHHHHHHhcCCCeEEEe
Q 022988 140 SVYREKVVPVASMLTP------NQFEAEQLT--GFRI------G-SEADGREACKILHAAGPAKVVIT 192 (289)
Q Consensus 140 ~~l~~~ll~~~dii~p------N~~E~~~L~--g~~~------~-~~~~~~~a~~~L~~~g~~~Vvvt 192 (289)
+.+.+ + +|++.. |..=++.+. |.++ . +.+++..+++.+...|.+.+++.
T Consensus 184 ~~l~~-~---vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 184 PKVAE-Y---ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp HHHHH-H---CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHH-h---CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 54443 2 566643 333233332 4442 2 67899999999999898777775
No 80
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=52.51 E-value=1e+02 Score=27.70 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH------HHHh--hCCCC----
Q 022988 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFRI---- 168 (289)
Q Consensus 101 ~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E------~~~L--~g~~~---- 168 (289)
.+....+.+.+++. |++++..| ++.+.++.+.+ + .+|+++.-..| ++.+ +|.++
T Consensus 100 ~e~~~~L~~~~~~~--Gi~~~stp---------fD~~svd~l~~-~--~vd~~KIgS~~~~N~pLL~~va~~gKPViLSt 165 (385)
T 1vli_A 100 AEWILPLLDYCREK--QVIFLSTV---------CDEGSADLLQS-T--SPSAFKIASYEINHLPLLKYVARLNRPMIFST 165 (385)
T ss_dssp GGGHHHHHHHHHHT--TCEEECBC---------CSHHHHHHHHT-T--CCSCEEECGGGTTCHHHHHHHHTTCSCEEEEC
T ss_pred HHHHHHHHHHHHHc--CCcEEEcc---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEEC
Confidence 34556667777777 99888888 55666665433 2 25666544433 2333 34442
Q ss_pred --CCHHHHHHHHHHHHhcCCCeEEEeee
Q 022988 169 --GSEADGREACKILHAAGPAKVVITSI 194 (289)
Q Consensus 169 --~~~~~~~~a~~~L~~~g~~~Vvvt~g 194 (289)
.+.+++..+++.+.+.|++.|++..+
T Consensus 166 GmaTl~Ei~~Ave~i~~~Gn~~iiLlhc 193 (385)
T 1vli_A 166 AGAEISDVHEAWRTIRAEGNNQIAIMHC 193 (385)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 47899999999999889866666543
No 81
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=41.51 E-value=13 Score=34.64 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=18.7
Q ss_pred cccCCCCCchHHHHHH-HHHHHcc
Q 022988 204 GSHQKEKGTGDLMTAL-LLGWSNK 226 (289)
Q Consensus 204 ~~~~dt~GAGD~f~g~-l~~~l~~ 226 (289)
..|+.|+|-||+|+|+ |++.|+.
T Consensus 445 ~~P~~TVGLGDtiSagaF~~~l~~ 468 (474)
T 3drw_A 445 QNPVLTVGLGDTISAGAFLTYLEF 468 (474)
T ss_dssp SSCSCCTTHHHHHHHHHHHHHHHH
T ss_pred cCCCccccCCchhhHHHHHHHHHH
Confidence 4578899999999987 8877653
No 82
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=40.92 E-value=13 Score=34.49 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=18.1
Q ss_pred ccCCCCCchHHH-HHHHHHHHcc
Q 022988 205 SHQKEKGTGDLM-TALLLGWSNK 226 (289)
Q Consensus 205 ~~~dt~GAGD~f-~g~l~~~l~~ 226 (289)
.++.|+|.||+| +|||++.++.
T Consensus 442 ~P~~TVGLGDtISa~gfv~~l~~ 464 (467)
T 1gc5_A 442 SPKSTVGIGDTISSSAFVSEFGM 464 (467)
T ss_dssp SCSCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCceecCCcchhhHHHHHHHHH
Confidence 468899999999 5689988763
No 83
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=39.95 E-value=2e+02 Score=25.41 Aligned_cols=78 Identities=13% Similarity=0.127 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH------HHHh--hCCCC---
Q 022988 100 FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFRI--- 168 (289)
Q Consensus 100 ~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E------~~~L--~g~~~--- 168 (289)
+.+....+.+.+++. |++++..| ++.+.++.+.+ + .+|+++.-..| ++.+ +|.++
T Consensus 89 ~~e~~~~L~~~~~~~--Gi~~~st~---------~d~~svd~l~~-~--~v~~~KI~S~~~~n~~LL~~va~~gkPviLs 154 (349)
T 2wqp_A 89 NEEDEIKLKEYVESK--GMIFISTL---------FSRAAALRLQR-M--DIPAYKIGSGECNNYPLIKLVASFGKPIILS 154 (349)
T ss_dssp CHHHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-H--TCSCEEECGGGTTCHHHHHHHHTTCSCEEEE
T ss_pred CHHHHHHHHHHHHHh--CCeEEEee---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEE
Confidence 345667777778887 99988888 55666665543 2 24555543333 2333 24442
Q ss_pred ---CCHHHHHHHHHHHHhcCCCeEEE
Q 022988 169 ---GSEADGREACKILHAAGPAKVVI 191 (289)
Q Consensus 169 ---~~~~~~~~a~~~L~~~g~~~Vvv 191 (289)
.+.+++..+++.+.+.|++.+++
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999999999888854444
No 84
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=39.25 E-value=49 Score=27.36 Aligned_cols=109 Identities=19% Similarity=0.189 Sum_probs=61.0
Q ss_pred CeEEEEeccCccCccchhh----cHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcccC-E
Q 022988 15 GRVLSIQSHTVQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYT-H 89 (289)
Q Consensus 15 ~~vl~i~g~~~~G~vG~~~----~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~-~ 89 (289)
+||+.++|-.-++.+...+ +...++.+.+.++.+|.+ -++.+....+.+..++ ... .
T Consensus 88 krvii~gggaqv~qva~gai~eadrhnirgerisvdt~p~v----------------ge~~l~~av~av~~lp--r~~~l 149 (223)
T 1y7p_A 88 KRVIILGGGALVSQVAIGAISEADRHNLRGERISVDTMPVV----------------GEEEIAEAVKAVSRLH--RAEVL 149 (223)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTSCCEEEEEEECC----------------SHHHHHHHHHHGGGST--TEEEE
T ss_pred cEEEEECCcHHHHHHHHhhcchhhhcccccceeeeecceec----------------CHHHHHHHHHHHhhcc--cccee
Confidence 3578887766555554433 333355555544433322 3566666666666654 233 4
Q ss_pred EEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 90 v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
++.|++-.+. +.+.++++|+. ++||+. .+|..+ +-..+|++.-+.-.+..+.
T Consensus 150 vlags~mgg~----i~~~v~~~~~~--~i~vi~-l~m~gs----------------v~~~~dlvv~dp~qag~~a 201 (223)
T 1y7p_A 150 VLAGGIMGGK----ITEEVKKLRKS--GIRVIS-LSMFGS----------------VPDVADVVISDPVMAGTLA 201 (223)
T ss_dssp EEESSBCCTH----HHHHHHHHGGG--TCEEEE-ESCBSS----------------HHHHSSEEESSHHHHHHHH
T ss_pred eEecccccch----HHHHHHHHHHC--CCeEEE-ecCCCC----------------ccccccEEecCchhhhHHH
Confidence 7778876553 34556678887 877543 333221 2236788877776665543
No 85
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=38.75 E-value=15 Score=34.01 Aligned_cols=22 Identities=18% Similarity=0.314 Sum_probs=18.3
Q ss_pred ccCCCCCchHHH-HHHHHHHHcc
Q 022988 205 SHQKEKGTGDLM-TALLLGWSNK 226 (289)
Q Consensus 205 ~~~dt~GAGD~f-~g~l~~~l~~ 226 (289)
.++.|+|.||+| +|||++.|+.
T Consensus 431 ~P~~TVGlGDtiSa~gf~~~l~~ 453 (455)
T 1ua4_A 431 KPKSTVGIGDTISSSAFIGEFSF 453 (455)
T ss_dssp SCSCCTTHHHHHHHHHHHHHHHT
T ss_pred CCCceecCCcchhhHHHHHHHHh
Confidence 468899999999 5689988864
No 86
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=37.81 E-value=14 Score=34.25 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=12.8
Q ss_pred ccCCCCCchHHH-HHHHHHHHc
Q 022988 205 SHQKEKGTGDLM-TALLLGWSN 225 (289)
Q Consensus 205 ~~~dt~GAGD~f-~g~l~~~l~ 225 (289)
.++.|+|.||+| +|||++.++
T Consensus 434 ~P~~TVGLGDtISa~gfv~~l~ 455 (457)
T 1l2l_A 434 KPKSTVGIGDTISSSAFVSEFS 455 (457)
T ss_dssp ------CTTHHHHHHHHHHHHH
T ss_pred CCCceecCCcchhhHHHHHHHh
Confidence 467899999999 568988775
No 87
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=37.27 E-value=1.4e+02 Score=26.44 Aligned_cols=77 Identities=10% Similarity=0.232 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH------HHHh--hCCCC----
Q 022988 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFRI---- 168 (289)
Q Consensus 101 ~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E------~~~L--~g~~~---- 168 (289)
.+....+.+.+++. |++++..| ++.+.++.+.+ + .+|+++.-..| ++.+ +|.++
T Consensus 77 ~e~~~~L~~~~~~~--Gi~~~st~---------fD~~svd~l~~-~--~v~~~KI~S~~~~N~pLL~~va~~gKPviLst 142 (350)
T 3g8r_A 77 PEQMQKLVAEMKAN--GFKAICTP---------FDEESVDLIEA-H--GIEIIKIASCSFTDWPLLERIARSDKPVVAST 142 (350)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-T--TCCEEEECSSSTTCHHHHHHHHTSCSCEEEEC
T ss_pred HHHHHHHHHHHHHc--CCcEEecc---------CCHHHHHHHHH-c--CCCEEEECcccccCHHHHHHHHhhCCcEEEEC
Confidence 45566666777777 88888777 55565665533 2 25555432222 2222 24432
Q ss_pred --CCHHHHHHHHHHHHhcCCCeEEE
Q 022988 169 --GSEADGREACKILHAAGPAKVVI 191 (289)
Q Consensus 169 --~~~~~~~~a~~~L~~~g~~~Vvv 191 (289)
.+.+++..+++.+.+.|.+.+++
T Consensus 143 Gmstl~Ei~~Ave~i~~~g~~viLl 167 (350)
T 3g8r_A 143 AGARREDIDKVVSFMLHRGKDLTIM 167 (350)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999999998888764553
No 88
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=37.23 E-value=33 Score=25.05 Aligned_cols=31 Identities=19% Similarity=0.081 Sum_probs=26.4
Q ss_pred cCCCCCchHHHHHHHHHHHccCC-CCHHHHHHH
Q 022988 206 HQKEKGTGDLMTALLLGWSNKYR-DNLDIAAEL 237 (289)
Q Consensus 206 ~~dt~GAGD~f~g~l~~~l~~~g-~~~~~A~~~ 237 (289)
+.|.+|-||..-|.+++++.+ | .+.++|+..
T Consensus 63 R~DKh~kGd~aEA~iAyAWle-G~is~eEavei 94 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLM-GLISEREAVEI 94 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHT-TSSCHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHh-ccccHHHHHHH
Confidence 367899999999999999988 6 788888764
No 89
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.90 E-value=1.7e+02 Score=25.15 Aligned_cols=88 Identities=17% Similarity=0.094 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHhcCCCceEEEccccccCCC-ccCCh-hHHH-HHHHhhcC-CceEEcCCHHHHHHhhCCCCCCHHHH
Q 022988 99 SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPS-ELVS-VYREKVVP-VASMLTPNQFEAEQLTGFRIGSEADG 174 (289)
Q Consensus 99 ~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~-~~~~~-~~~~-~l~~~ll~-~~dii~pN~~E~~~L~g~~~~~~~~~ 174 (289)
...+.+.++.+.+++. |.++++++.++...- .-.++ +.+. ..+. +.. .+|+++.+..... +| +.+++
T Consensus 139 ~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~-a~~lGaD~iKv~~~~~~--~g----~~~~~ 209 (304)
T 1to3_A 139 QRLNMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKE-LGDSGADLYKVEMPLYG--KG----ARSDL 209 (304)
T ss_dssp HHHHHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHH-HTTSSCSEEEECCGGGG--CS----CHHHH
T ss_pred HHHHHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHH-HHHcCCCEEEeCCCcCC--CC----CHHHH
Confidence 3456778888888888 999999987653210 00112 2222 2333 333 6899987664220 12 34566
Q ss_pred HHHHHHHHhc-CCCeEEEeeee
Q 022988 175 REACKILHAA-GPAKVVITSIN 195 (289)
Q Consensus 175 ~~a~~~L~~~-g~~~Vvvt~g~ 195 (289)
.+.++.+... +.+.|++.+|.
T Consensus 210 ~~vv~~~~~~~~~P~Vv~aGG~ 231 (304)
T 1to3_A 210 LTASQRLNGHINMPWVILSSGV 231 (304)
T ss_dssp HHHHHHHHHTCCSCEEECCTTS
T ss_pred HHHHHhccccCCCCeEEEecCC
Confidence 6666654443 44558888875
No 90
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=33.95 E-value=1.2e+02 Score=25.76 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=36.7
Q ss_pred CchHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-CCCCcccc
Q 022988 211 GTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFD-PQSSSLEI 267 (289)
Q Consensus 211 GAGD~f~g~l~~~l~~~g~~~~~A~~~A~a~a~~~l~~~~~~~~~~~~~-~~~~~~~~ 267 (289)
.-||.+.+.+..+... |.++++|++.++.-...-.+...+.....|.. ..++..||
T Consensus 195 ElGDlLFalVnlAR~~-gIDpE~ALr~an~KF~~Rf~~~E~~~~~~g~~l~~~sl~e~ 251 (265)
T 3cra_A 195 EMGDLLFATVNLARHL-GTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETM 251 (265)
T ss_dssp HHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----CCH
T ss_pred HHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCHHHH
Confidence 4699999888766665 89999999999986666665555444445643 23444555
No 91
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=31.05 E-value=81 Score=27.76 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHhCCCcc-cCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccc
Q 022988 68 NGQQLCDLIEGLEANNLLY-YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (289)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~-~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~ 127 (289)
++..+++.+..+....++. +.+|++|..........+.+++...-.. ++||+.|...+
T Consensus 259 ~~y~idRmL~qL~~aG~f~~~~GiilG~~~~~~~~~~~~~vl~~~l~~--~iPV~~~~~~G 317 (346)
T 4eys_A 259 KPEDFKKMLLTLKDTGIFAVINGLLVGKPMDETFHDDYKEALLDIIDS--NIPIVYNLNVG 317 (346)
T ss_dssp CHHHHHHHHHHHHTTTGGGTCSEEEEECCGGGTTHHHHHHHHHHHSCT--TSCEEEEESCS
T ss_pred CHHHHHHHHHHHHHcCCcccCCEEEEecCCCCCcchhHHHHHHHHHcC--CCcEEECCCCC
Confidence 4578999999999887765 7899999765433333455555554433 89999997554
No 92
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.68 E-value=1.1e+02 Score=24.08 Aligned_cols=91 Identities=11% Similarity=0.207 Sum_probs=44.5
Q ss_pred CCCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecC---CCCCCcceeeCCHHHHHHHHHHHHhCCCcccC
Q 022988 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNH---TGYPTFKGQVLNGQQLCDLIEGLEANNLLYYT 88 (289)
Q Consensus 12 ~~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~---tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~ 88 (289)
+.|.+||++++. |++|.. ..+.|.+.|.++..+........ .+...+.+...+++++...++ . +|
T Consensus 2 ~~m~~ilItGat---G~iG~~-l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~-----~d 69 (227)
T 3dhn_A 2 EKVKKIVLIGAS---GFVGSA-LLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK---G-----AD 69 (227)
T ss_dssp -CCCEEEEETCC---HHHHHH-HHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT---T-----CS
T ss_pred CCCCEEEEEcCC---chHHHH-HHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc---C-----CC
Confidence 456788877655 466653 45668788876654433210000 111112333445555555433 2 45
Q ss_pred EEEE--eecCC-----HhHHHHHHHHHHHHHhc
Q 022988 89 HLLT--GYIGS-----VSFLNTILQVVEKLRSI 114 (289)
Q Consensus 89 ~v~~--G~l~~-----~~~~~~~~~~l~~~k~~ 114 (289)
+|+. |.... .........+++.+++.
T Consensus 70 ~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~ 102 (227)
T 3dhn_A 70 AVISAFNPGWNNPDIYDETIKVYLTIIDGVKKA 102 (227)
T ss_dssp EEEECCCC------CCSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 4433 21111 11355667788888876
No 93
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=27.26 E-value=2.9e+02 Score=23.49 Aligned_cols=109 Identities=12% Similarity=0.054 Sum_probs=65.3
Q ss_pred eCCHHHHHHHHHHHHhCCCcccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHh
Q 022988 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (289)
Q Consensus 66 ~l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ 145 (289)
.++.+++...++.+.+... -..+++|--++....+.+.++++.+++. ++.+.+++.. .+++.++.+++.
T Consensus 83 ~ls~eei~~~i~~~~~~g~--~~i~~~gGe~p~~~~~~~~~li~~i~~~--~~~i~~s~g~-------l~~e~l~~L~~a 151 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGA--KTIVLQSGEDPYXMPDVISDIVKEIKKM--GVAVTLSLGE-------WPREYYEKWKEA 151 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTC--SEEEEEESCCGGGTTHHHHHHHHHHHTT--SCEEEEECCC-------CCHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHCCC--CEEEEEeCCCCCccHHHHHHHHHHHHhc--CceEEEecCC-------CCHHHHHHHHHh
Confidence 4688888887777665442 1133444221222347788899999986 7777666521 345666655542
Q ss_pred hcC--CceEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHhcCCC
Q 022988 146 VVP--VASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPA 187 (289)
Q Consensus 146 ll~--~~dii~pN~~E~~~L~g~~~~~~~~~~~a~~~L~~~g~~ 187 (289)
-+. ...+=++|..-...+.+.. +.++..++++.+.+.|.+
T Consensus 152 g~~~v~i~let~~~~~~~~i~~~~--~~~~~~~~i~~~~~~Gi~ 193 (348)
T 3iix_A 152 GADRYLLRHETANPVLHRKLRPDT--SFENRLNCLLTLKELGYE 193 (348)
T ss_dssp TCCEEECCCBCSCHHHHHHHSTTS--CHHHHHHHHHHHHHTTCE
T ss_pred CCCEEeeeeeeCCHHHHHHhCCCc--CHHHHHHHHHHHHHhCCe
Confidence 111 1223345666666666543 678888888888888864
No 94
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=25.84 E-value=1.4e+02 Score=25.09 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=40.8
Q ss_pred CCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEEEeecCCH-hHHHHHHHHHHHHHhcCCCceEEE
Q 022988 56 HTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV-SFLNTILQVVEKLRSINPNLIYVC 122 (289)
Q Consensus 56 ~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~-~~~~~~~~~l~~~k~~~~~~~vv~ 122 (289)
..|...+.+..++...++.+++.... ++|.++.|.-.+. .+.+.+.+.++.+|++ ++++..
T Consensus 12 ~~GlT~v~dkglg~~~~~d~Le~~g~----yID~lKfg~Gt~~l~~~~~l~eki~l~~~~--gV~v~~ 73 (251)
T 1qwg_A 12 QRGLTVVLDKGLPPKFVEDYLKVCGD----YIDFVKFGWGTSAVIDRDVVKEKINYYKDW--GIKVYP 73 (251)
T ss_dssp CCCCEEEEESSCCHHHHHHHHHHHGG----GCSEEEECTTGGGGSCHHHHHHHHHHHHTT--TCEEEE
T ss_pred ccCeeEEecCCCCHHHHHHHHHHhhh----hcceEEecCceeeecCHHHHHHHHHHHHHc--CCeEEC
Confidence 44554444455778888888876653 4788998853322 2356788888999988 776544
No 95
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=25.49 E-value=1.3e+02 Score=25.80 Aligned_cols=50 Identities=12% Similarity=0.046 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhCCCcccCEEEEeecCCHhH--HHHHHHHHHHHHhcCCCceEEE-cc
Q 022988 69 GQQLCDLIEGLEANNLLYYTHLLTGYIGSVSF--LNTILQVVEKLRSINPNLIYVC-DP 124 (289)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~~~--~~~~~~~l~~~k~~~~~~~vv~-Dp 124 (289)
+++....++.+.+.. .|+|++|+ .... .+.+.++++.+|+.. ++|+|+ -|
T Consensus 52 ~~~~~~~~~~~~~sG---tDai~VGS--~~vt~~~~~~~~~v~~ik~~~-~lPvil~fP 104 (286)
T 3vk5_A 52 VTEAVEKAAELTRLG---FAAVLLAS--TDYESFESHMEPYVAAVKAAT-PLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHHHHHHTT---CSCEEEEC--SCCSSHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred cHHHHHHHHHHHhcC---CCEEEEcc--CCCCcchHHHHHHHHHHHHhC-CCCEEEECC
Confidence 355555566665543 78899993 3334 566677777888732 789999 76
No 96
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=25.26 E-value=77 Score=20.61 Aligned_cols=31 Identities=6% Similarity=-0.032 Sum_probs=24.1
Q ss_pred CHHHHHHhhCCCCC----CHHHHHHHHHHHHhcCC
Q 022988 156 NQFEAEQLTGFRIG----SEADGREACKILHAAGP 186 (289)
Q Consensus 156 N~~E~~~L~g~~~~----~~~~~~~a~~~L~~~g~ 186 (289)
+..|+..++|.+.. +.+++.++-++|+....
T Consensus 2 t~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nh 36 (65)
T 2guz_B 2 TLDESCKILNIEESKGDLNMDKINNRFNYLFEVND 36 (65)
T ss_dssp CHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhC
Confidence 56899999998644 67888888999886543
No 97
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=24.82 E-value=96 Score=26.46 Aligned_cols=61 Identities=16% Similarity=0.211 Sum_probs=40.6
Q ss_pred CCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEc
Q 022988 56 HTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCD 123 (289)
Q Consensus 56 ~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~D 123 (289)
..|...+.+..++...++.+++.... ++|.++.|.-.+....+ +.+.++.++++ ++++..-
T Consensus 39 ~~GlT~v~Dkglg~~~~~DlLe~ag~----yID~lKfg~GTs~l~~~-l~ekI~l~~~~--gV~v~~G 99 (276)
T 1u83_A 39 ETGQSILIDNGYPLQFFKDAIAGASD----YIDFVKFGWGTSLLTKD-LEEKISTLKEH--DITFFFG 99 (276)
T ss_dssp SSSCEEEEESSCCHHHHHHHHHHHGG----GCCEEEECTTGGGGCTT-HHHHHHHHHHT--TCEEEEC
T ss_pred ccCceEEecCCCCHHHHHHHHHHhhh----hcceEEecCcchhhhHH-HHHHHHHHHHc--CCeEeCC
Confidence 34555554456788888888876653 48889998543333333 77888888888 8776543
No 98
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=24.53 E-value=2.2e+02 Score=26.10 Aligned_cols=61 Identities=21% Similarity=0.402 Sum_probs=40.1
Q ss_pred eeeCCHHHHHHHHHHHHhCCCcccCEEEEeecCCHhHHHHHHHHHHHHHhcCCCceEEEccc
Q 022988 64 GQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPV 125 (289)
Q Consensus 64 g~~l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~ 125 (289)
|+..+++++-++++.+.-.+. .-...++--++.....+.+-.+++..++..-.+.+++||.
T Consensus 308 GP~~~p~elv~L~~~LnP~~e-pGRlTLI~RmGa~kv~~~LP~li~aV~~~G~~VvW~cDPM 368 (462)
T 3rzi_A 308 GPNMTPELAVEYVERLDPHNK-PGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPM 368 (462)
T ss_dssp CTTCCHHHHHHHHHHHCTTCC-TTSEEEEECCCTTTHHHHHHHHHHHHHHTSCCCEEEECCS
T ss_pred CCCCCHHHHHHHHHHhCCCCC-CCeEEEEEccCCchhhhhHHHHHHHHHHCCCCeEEEeCCC
Confidence 346788999998888875442 1334455445555556777778888887633456778994
No 99
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.25 E-value=3e+02 Score=22.68 Aligned_cols=117 Identities=11% Similarity=0.131 Sum_probs=59.6
Q ss_pred CCCeEEEEeccCccCccchhhcHHHHHhCCCcceeeceEEeecCCCCCCcceeeCCHHHHHHHHHHHHhCCCcccCEEEE
Q 022988 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (289)
Q Consensus 13 ~~~~vl~i~g~~~~G~vG~~~~~~~l~~~Gv~~~~v~~~~~~~~tg~~~i~g~~l~~~~~~~~~~~l~~~~~~~~~~v~~ 92 (289)
..++|+......-.--.|.......|+..|+++.++.. .++++++........ +++|.+
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~---------------~vp~e~l~~~~~~~~------~d~V~l 180 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGR---------------DVPAEEVLAAVQKEK------PIMLTG 180 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEE---------------ECCSHHHHHHHHHHC------CSEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC---------------CCCHHHHHHHHHHcC------CCEEEE
Confidence 34555554332111123433233347888887654432 344455554443332 565544
Q ss_pred eecCCHhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhh
Q 022988 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (289)
Q Consensus 93 G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~ 164 (289)
..+.. .....+.++++.+++..++++|++=-. . ..++. .. -+ .+|...++..|+-.+.
T Consensus 181 S~l~~-~~~~~~~~~i~~l~~~~~~~~v~vGG~------~-~~~~~----~~-~i-gad~~~~da~~av~~~ 238 (258)
T 2i2x_B 181 TALMT-TTMYAFKEVNDMLLENGIKIPFACGGG------A-VNQDF----VS-QF-ALGVYGEEAADAPKIA 238 (258)
T ss_dssp ECCCT-TTTTHHHHHHHHHHTTTCCCCEEEEST------T-CCHHH----HH-TS-TTEEECSSTTHHHHHH
T ss_pred Eeecc-CCHHHHHHHHHHHHhcCCCCcEEEECc------c-CCHHH----HH-Hc-CCeEEECCHHHHHHHH
Confidence 33322 235567778888888755566555321 1 22222 22 22 5899999887765544
No 100
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=24.07 E-value=1.4e+02 Score=22.01 Aligned_cols=66 Identities=11% Similarity=0.071 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHHHHHhhCCCCCCHHHHHHHHHH
Q 022988 101 LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKI 180 (289)
Q Consensus 101 ~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~a~~~ 180 (289)
.+.+..+.+..+.+ ++.++.||-.. .+..+..+.+ .+|.+........+. |.+..+.+.+.++.+.
T Consensus 38 ~~~l~~I~~~~~~r--~VIi~TD~D~~-------GekIRk~i~~-~lp~~~hafi~r~~~----gVE~a~~~~I~~aL~~ 103 (119)
T 2fcj_A 38 DARLEELADELEGY--DVYLLADADEA-------GEKLRRQFRR-MFPEAEHLYIDRAYR----EVAAAPIWHLAQVLLR 103 (119)
T ss_dssp HHHHHHHHHHTTTS--EEEEECCSSHH-------HHHHHHHHHH-HCTTSEEECCCTTTC----STTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CEEEEECCCcc-------HHHHHHHHHH-HCCCCcEEeccCCcc----CcccCCHHHHHHHHHh
Confidence 34454555555555 77777799432 1233344444 778777666666553 6665566666555443
No 101
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=23.78 E-value=90 Score=25.78 Aligned_cols=55 Identities=20% Similarity=0.086 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHhCCCcccCEEEEeecCCH--hHHHHHHHHHHHHHhcCCCceEEEccc
Q 022988 67 LNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDPV 125 (289)
Q Consensus 67 l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~--~~~~~~~~~l~~~k~~~~~~~vv~Dp~ 125 (289)
.++++++.+.+++....-...+.|..|.|... ...+.+.++++.++ +.++.|-=.
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHRA 126 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ----GLPLVFHMA 126 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TCCEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCeEEEECc
Confidence 45678888877776544335789999998633 44678888888775 566777543
No 102
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=22.63 E-value=3.8e+02 Score=23.58 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=27.5
Q ss_pred cCEEEEee-cCC---HhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 022988 87 YTHLLTGY-IGS---VSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (289)
Q Consensus 87 ~~~v~~G~-l~~---~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~ 128 (289)
+.++++|+ +-. ......+.++++.+|++ +.+|++|.-..|
T Consensus 119 v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~--g~~VflDlK~~D 162 (352)
T 2fds_A 119 ALIYKMNFAFYIPYGSVGINALKNVFDYLNSM--NIPTMLDMKIND 162 (352)
T ss_dssp CSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEECC
T ss_pred cCEEEecHHHHHhCCHHHHHHHHHHHHHHHHC--CCeEEEEeecCc
Confidence 56789985 221 22345567777889887 899999985544
No 103
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=22.13 E-value=75 Score=25.38 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=28.2
Q ss_pred cCCHHHHHHhhCCCC-----CCHHHHHHHHHHHHhcCCCeEE
Q 022988 154 TPNQFEAEQLTGFRI-----GSEADGREACKILHAAGPAKVV 190 (289)
Q Consensus 154 ~pN~~E~~~L~g~~~-----~~~~~~~~a~~~L~~~g~~~Vv 190 (289)
++...+++.++|.++ .+.+++++..+++.+.|++.||
T Consensus 106 ~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 106 IVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp SSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 445677888888763 5678899999999998986544
No 104
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=21.75 E-value=1.6e+02 Score=25.30 Aligned_cols=54 Identities=22% Similarity=0.276 Sum_probs=34.5
Q ss_pred eeCCHHHHHHHHHHHHhCCCcccCEEEE-------eecCCHhHHHHHHHHHHHHHhcCCCceEEEcccc
Q 022988 65 QVLNGQQLCDLIEGLEANNLLYYTHLLT-------GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVM 126 (289)
Q Consensus 65 ~~l~~~~~~~~~~~l~~~~~~~~~~v~~-------G~l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~ 126 (289)
..++.++++.+.+.+. +++|-+ |+..++...+.+.++++.++++ |+.|++|.-.
T Consensus 67 ~~~~~~~~~~l~~~~G------~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~--Gi~VilD~H~ 127 (327)
T 3pzt_A 67 EYVNKDSLKWLRDDWG------ITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKEL--GIYVIIDWHI 127 (327)
T ss_dssp GGCSHHHHHHHHHHTC------CSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHH--TCEEEEEEEC
T ss_pred CCCCHHHHHHHHHhcC------CCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHC--CCEEEEEecc
Confidence 3566667666433322 444433 2233444567788899999998 9999999743
No 105
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=21.72 E-value=1.9e+02 Score=24.33 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHHhCCCcccCEEEEee-cCCHhHHHHHHHHHHHHHhcCCCceEEEcccccc
Q 022988 68 NGQQLCDLIEGLEANNLLYYTHLLTGY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (289)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~v~~G~-l~~~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~ 128 (289)
+.++...+++.+.. +...+++|+ +-.....+.+.++.+.++.+ +.+|++|--..|
T Consensus 42 ~~~~al~l~~~l~~----~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~--g~~VflDlK~~D 97 (260)
T 3eww_A 42 LARELLQLADALGP----SICMLKTHVDILNDFTLDVMKELITLAKCH--EFLIFENRKFAD 97 (260)
T ss_dssp CHHHHHHHHHHHGG----GCSEEEECGGGCTTCCHHHHHHHHHHHHHH--TCEEEEEEEECS
T ss_pred CHHHHHHHHHHhCC----CceEEEEcHHHHHHhCHHHHHHHHHHHhhc--CCeEEEEeeccc
Confidence 34566666666653 256789995 22223355666655555555 889999985543
No 106
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.34 E-value=55 Score=29.54 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhcCCCceEEEccccc
Q 022988 101 LNTILQVVEKLRSINPNLIYVCDPVMG 127 (289)
Q Consensus 101 ~~~~~~~l~~~k~~~~~~~vv~Dp~~~ 127 (289)
.+.++++++.++++ |++||+|-|+-
T Consensus 76 ~~df~~lv~~aH~~--Gi~VilD~V~N 100 (496)
T 4gqr_A 76 EDEFRNMVTRCNNV--GVRIYVDAVIN 100 (496)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred HHHHHHHHHHHHHC--CCEEEEEEccC
Confidence 56788899999999 99999998764
No 107
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=21.19 E-value=3.7e+02 Score=22.85 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=42.1
Q ss_pred HHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcCCceEEcCCHHH------HHHh--hCCCC-------CCHHH
Q 022988 109 EKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFRI-------GSEAD 173 (289)
Q Consensus 109 ~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~~~dii~pN~~E------~~~L--~g~~~-------~~~~~ 173 (289)
+.+++. |++++-+| ++++.++.+. .++|++..-..+ ++.+ +|.++ .+.++
T Consensus 85 ~~~~e~--Glp~~Tev---------~d~~~v~~l~----~~vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~e 149 (285)
T 3sz8_A 85 EVKARF--GVPVITDV---------HEAEQAAPVA----EIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQ 149 (285)
T ss_dssp HHHHHH--CCCEEEEC---------CSGGGHHHHH----TTCSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGG
T ss_pred HHHHhc--CCeEEEEe---------CCHHHHHHHH----HhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHH
Confidence 334455 88888887 4444444432 346776544322 2222 24432 25678
Q ss_pred HHHHHHHHHhcCCCeEEEee
Q 022988 174 GREACKILHAAGPAKVVITS 193 (289)
Q Consensus 174 ~~~a~~~L~~~g~~~Vvvt~ 193 (289)
+..+++.+.+.|.+.|+++.
T Consensus 150 i~~ave~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 150 LKHVVSKCGEVGNDRVMLCE 169 (285)
T ss_dssp THHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEe
Confidence 89999999998987776654
No 108
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=20.60 E-value=3.9e+02 Score=22.67 Aligned_cols=63 Identities=16% Similarity=0.193 Sum_probs=40.8
Q ss_pred cCEEEEee--c-CC-HhHHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhHHHHHHHhhcC-----CceEEcCCH
Q 022988 87 YTHLLTGY--I-GS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-----VASMLTPNQ 157 (289)
Q Consensus 87 ~~~v~~G~--l-~~-~~~~~~~~~~l~~~k~~~~~~~vv~Dp~~~~~g~~~~~~~~~~~l~~~ll~-----~~dii~pN~ 157 (289)
+.++++|+ + .. ..-.+.+.++++.++++ +.+|++|--..| . +.+...+.+.++. .+|.+|.|.
T Consensus 63 v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~--g~~VflDlK~~D-----I-pnTv~~ya~~~~~~~~~lg~D~vTvh~ 134 (284)
T 3l52_A 63 VAVFKPQSAFFERFGSRGVAVLEKTVAEARAA--GALVVMDAKRGD-----I-GSTMAAYAEAFLRKDSPLFSDALTVSP 134 (284)
T ss_dssp CSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHT--TCEEEEEEEECC-----C-HHHHHHHHHHHSSTTSTTCCSEEEECC
T ss_pred ceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHC--CCcEEEEecccC-----c-HHHHHHHHHHHhccccccCCcEEEEec
Confidence 55789985 1 22 22356778899999987 899999986554 2 2223333433542 489999876
No 109
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=20.56 E-value=1.2e+02 Score=25.59 Aligned_cols=56 Identities=11% Similarity=0.175 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHhCCCcccCEEEEeecCCH--hHHHHHHHHHHHHHhcCCCceEEEcccc
Q 022988 67 LNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDPVM 126 (289)
Q Consensus 67 l~~~~~~~~~~~l~~~~~~~~~~v~~G~l~~~--~~~~~~~~~l~~~k~~~~~~~vv~Dp~~ 126 (289)
.++++++.+.+++....-...+.|..|.|... ...+.+.++++.++ +.++.|-=.+
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHRAf 124 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG----PLAVTFHRAF 124 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TSEEEECGGG
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCcEEEECch
Confidence 46778888887776544335889999998633 44678888888775 5678776543
No 110
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=20.19 E-value=1.8e+02 Score=22.92 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=45.7
Q ss_pred CCCCCeEEEEeccCccCccchhh---cHH----HHHhC--CCcceeeceEEee--cCCCCCCcceeeCCHHHHHHHHHHH
Q 022988 11 PSETGRVLSIQSHTVQGYVGNKS---AVF----PLQLL--GYDVDPIHSVQFS--NHTGYPTFKGQVLNGQQLCDLIEGL 79 (289)
Q Consensus 11 ~~~~~~vl~i~g~~~~G~vG~~~---~~~----~l~~~--Gv~~~~v~~~~~~--~~tg~~~i~g~~l~~~~~~~~~~~l 79 (289)
-++|.||+.|.|+.--+.....- ..+ .+++. |+++..+...... ...+.. ....++++..+.+.+
T Consensus 8 ~~~~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~----~~~~~~~~~~~~~~i 83 (191)
T 3k1y_A 8 HSHMRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMT----TRVHTTKLEEITSAL 83 (191)
T ss_dssp -CCSEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTS----SSCCCHHHHHHHHHH
T ss_pred hhhhceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhh----cCCCCHHHHHHHHHH
Confidence 36899999999997543322111 222 33334 6665544321100 011111 112346788888888
Q ss_pred HhCCCcccCEEEEee-cCCHhHHHHHHHHHHHHH
Q 022988 80 EANNLLYYTHLLTGY-IGSVSFLNTILQVVEKLR 112 (289)
Q Consensus 80 ~~~~~~~~~~v~~G~-l~~~~~~~~~~~~l~~~k 112 (289)
.+ .|++++|. .........++.+++++.
T Consensus 84 ~~-----AD~ivi~sP~Y~~~~~~~lK~~iD~~~ 112 (191)
T 3k1y_A 84 SA-----SDGLVVATPVFKASYTGLFKMFFDILD 112 (191)
T ss_dssp HH-----CSEEEEEEECBTTBSCHHHHHHHHHSC
T ss_pred HH-----CCEEEEEcCccCCcCcHHHHHHHHHhh
Confidence 85 45666653 222222334555666553
Done!