Your job contains 1 sequence.
>022989
MKFGETFTEYLHGDQERFLDKCSHVEYKRLKKVLKSCRTCKGLHDSACKTEQQWDEGKDI
SESQLCQCQSSCQLCDHMFFSELMKEASDIAGCFSSRARHLLHLHVASGMQRYVLRIRQC
FKNDQTAMIEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNFKSKMRAEHIELLQSP
WLIELGGFYLNFNGLNCGASSEFSGHFSFDFNASRPVMTLALPSSIKLEYDLTCAVCLDL
VFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELAGN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022989
(289 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2064935 - symbol:AT2G38920 species:3702 "Arabi... 900 3.1e-90 1
TAIR|locus:2024675 - symbol:NLA "nitrogen limitation adap... 511 2.0e-55 2
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 113 2.8e-06 1
UNIPROTKB|E1BSU9 - symbol:LOC416147 "Uncharacterized prot... 130 3.5e-06 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 110 6.1e-06 1
TAIR|locus:2128746 - symbol:RMA1 "RING membrane-anchor 1"... 126 7.9e-06 1
MGI|MGI:1196437 - symbol:Hltf "helicase-like transcriptio... 135 8.2e-06 1
UNIPROTKB|C9J060 - symbol:TRIM22 "E3 ubiquitin-protein li... 122 1.0e-05 1
UNIPROTKB|C9JIU5 - symbol:TRIM22 "E3 ubiquitin-protein li... 122 1.7e-05 1
UNIPROTKB|E2R9I5 - symbol:HLTF "Uncharacterized protein" ... 132 1.8e-05 1
UNIPROTKB|E1BM69 - symbol:LOC516599 "Uncharacterized prot... 127 2.5e-05 1
UNIPROTKB|G5E5Y3 - symbol:G5E5Y3 "Uncharacterized protein... 126 3.0e-05 1
UNIPROTKB|F1PIL1 - symbol:TRIM13 "Uncharacterized protein... 125 3.7e-05 1
UNIPROTKB|F1MLM2 - symbol:HLTF "Uncharacterized protein" ... 129 3.9e-05 1
UNIPROTKB|C9JWC5 - symbol:TRIM22 "E3 ubiquitin-protein li... 122 3.9e-05 1
UNIPROTKB|Q5SPU2 - symbol:TRIM26 "Tripartite motif-contai... 110 4.2e-05 1
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 110 5.4e-05 1
TAIR|locus:2086666 - symbol:AT3G27330 species:3702 "Arabi... 127 5.8e-05 1
UNIPROTKB|A6NL11 - symbol:TRIM15 "Tripartite motif-contai... 101 6.0e-05 1
UNIPROTKB|Q32L60 - symbol:TRIM13 "E3 ubiquitin-protein li... 121 8.8e-05 1
UNIPROTKB|F1RK25 - symbol:TRIM13 "Uncharacterized protein... 121 8.8e-05 1
UNIPROTKB|Q8IYM9 - symbol:TRIM22 "E3 ubiquitin-protein li... 122 9.4e-05 1
UNIPROTKB|H7C5K0 - symbol:HLTF "Helicase-like transcripti... 121 9.4e-05 1
UNIPROTKB|A2AAZ4 - symbol:TRIM39 "E3 ubiquitin-protein li... 99 9.9e-05 1
POMBASE|SPAC6B12.07c - symbol:SPAC6B12.07c "ubiquitin-pro... 84 0.00013 4
UNIPROTKB|H9KYY7 - symbol:H9KYY7 "Uncharacterized protein... 113 0.00014 1
MGI|MGI:1913847 - symbol:Trim13 "tripartite motif-contain... 119 0.00015 1
RGD|1307609 - symbol:Trim13 "tripartite motif-containing ... 119 0.00015 1
UNIPROTKB|E7EQQ5 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00015 1
UNIPROTKB|I3L8Y1 - symbol:TRIM43 "Uncharacterized protein... 119 0.00018 1
UNIPROTKB|E2QWA4 - symbol:TRIM22 "Uncharacterized protein... 119 0.00020 1
UNIPROTKB|J3KNZ3 - symbol:TRIM17 "E3 ubiquitin-protein li... 109 0.00021 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 96 0.00021 1
UNIPROTKB|I3LM88 - symbol:HLTF "Uncharacterized protein" ... 122 0.00024 1
UNIPROTKB|G4N7F0 - symbol:MGG_03582 "RING-14 protein" spe... 84 0.00024 3
UNIPROTKB|G3MWZ9 - symbol:TRIM34 "Uncharacterized protein... 121 0.00025 1
POMBASE|SPBC3D6.11c - symbol:slx8 "SUMO-targeted ubiquiti... 114 0.00025 1
UNIPROTKB|O60858 - symbol:TRIM13 "E3 ubiquitin-protein li... 117 0.00025 1
ZFIN|ZDB-GENE-050522-516 - symbol:trim13 "tripartite moti... 117 0.00026 1
FB|FBgn0033828 - symbol:CG17048 species:7227 "Drosophila ... 95 0.00027 1
UNIPROTKB|H3BPQ8 - symbol:BFAR "Bifunctional apoptosis re... 95 0.00027 1
UNIPROTKB|H3BRQ5 - symbol:BFAR "Bifunctional apoptosis re... 95 0.00027 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 104 0.00028 1
UNIPROTKB|B2RNG4 - symbol:TRIM6-TRIM34 "TRIM6-TRIM34 read... 120 0.00032 1
CGD|CAL0002668 - symbol:TRY3 species:5476 "Candida albica... 104 0.00033 2
UNIPROTKB|Q5A1M4 - symbol:CaO19.1971 "Potential zinc RING... 104 0.00033 2
CGD|CAL0005238 - symbol:orf19.5438 species:5476 "Candida ... 94 0.00035 1
UNIPROTKB|E5RI62 - symbol:TRIM17 "E3 ubiquitin-protein li... 94 0.00035 1
UNIPROTKB|E1BKE6 - symbol:TRIM43B "Uncharacterized protei... 116 0.00038 1
MGI|MGI:2137352 - symbol:Trim6 "tripartite motif-containi... 116 0.00043 1
UNIPROTKB|Q3MJK3 - symbol:TRIM5 "Tripartite motif protein... 116 0.00045 1
UNIPROTKB|E1BSV9 - symbol:LOC416146 "Uncharacterized prot... 113 0.00045 1
MGI|MGI:1923931 - symbol:Trim12a "tripartite motif-contai... 112 0.00048 1
UNIPROTKB|F8W6N8 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00049 1
UNIPROTKB|Q58DK8 - symbol:TRIM38 "Tripartite motif-contai... 115 0.00052 1
UNIPROTKB|F1PJM3 - symbol:TRIM38 "Uncharacterized protein... 115 0.00052 1
UNIPROTKB|I3L6F8 - symbol:TRIM7 "Uncharacterized protein"... 115 0.00055 1
UNIPROTKB|A2AE48 - symbol:TRIM26 "Tripartite motif-contai... 110 0.00059 1
UNIPROTKB|I3LG00 - symbol:TRIM7 "Uncharacterized protein"... 114 0.00070 1
UNIPROTKB|F1NV67 - symbol:TRIM13 "Uncharacterized protein... 113 0.00072 1
UNIPROTKB|F1N2E6 - symbol:TRIM34 "Uncharacterized protein... 114 0.00073 1
UNIPROTKB|Q5D7I9 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00074 1
UNIPROTKB|Q5D7J0 - symbol:TRIM5 "Tripartite motif-contain... 114 0.00074 1
ZFIN|ZDB-GENE-050522-17 - symbol:trim35-1 "tripartite mot... 114 0.00077 1
RGD|1309031 - symbol:Hltf "helicase-like transcription fa... 117 0.00086 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 99 0.00089 1
ZFIN|ZDB-GENE-090511-2 - symbol:btr01 "bloodthirsty-relat... 114 0.00090 1
UNIPROTKB|I3LH17 - symbol:I3LH17 "Uncharacterized protein... 113 0.00093 1
UNIPROTKB|F1N541 - symbol:TRIM34 "Uncharacterized protein... 113 0.00094 1
UNIPROTKB|F1RLV7 - symbol:LOC100738990 "Uncharacterized p... 113 0.00095 1
UNIPROTKB|A6NLP3 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00095 1
UNIPROTKB|Q9C035 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00095 1
UNIPROTKB|Q1ACD8 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00095 1
UNIPROTKB|Q3ZEE5 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00095 1
UNIPROTKB|Q5C8T6 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00095 1
UNIPROTKB|Q5D7J1 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00095 1
UNIPROTKB|Q5BN31 - symbol:TRIM5 "Tripartite motif-contain... 113 0.00096 1
UNIPROTKB|G3N137 - symbol:G3N137 "Uncharacterized protein... 102 0.00097 1
ZFIN|ZDB-GENE-080219-8 - symbol:btr05 "bloodthirsty-relat... 113 0.00099 1
>TAIR|locus:2064935 [details] [associations]
symbol:AT2G38920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006817 "phosphate ion transport" evidence=RCA]
[GO:0009062 "fatty acid catabolic process" evidence=RCA]
[GO:0016036 "cellular response to phosphate starvation"
evidence=RCA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005770
InterPro:IPR017907 EMBL:AK119158 EMBL:BT006237 IPI:IPI00526484
PIR:A84811 RefSeq:NP_181426.2 UniGene:At.37231
ProteinModelPortal:Q8GW10 SMR:Q8GW10 PaxDb:Q8GW10
EnsemblPlants:AT2G38920.1 GeneID:818477 KEGG:ath:AT2G38920
TAIR:At2g38920 eggNOG:NOG314482 HOGENOM:HOG000240281
InParanoid:Q8GW10 KO:K16275 OMA:MNAIAIR PhylomeDB:Q8GW10
ProtClustDB:CLSN2687631 Genevestigator:Q8GW10 InterPro:IPR004331
Pfam:PF03105 PROSITE:PS51382 Uniprot:Q8GW10
Length = 335
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 177/291 (60%), Positives = 217/291 (74%)
Query: 1 MKFGETFTEYLHGDQERFLDKCSHVEYKRLKKVLKSCRTCKGLHDSACKTEQQWDEGKDI 60
MKFGETFTEYLHG++E FL+KC VEYK+LKKVLK C+TC ++ K+ D+G+ I
Sbjct: 1 MKFGETFTEYLHGEEEWFLEKCRFVEYKKLKKVLKKCKTC-----NSTKS----DDGQII 51
Query: 61 XXXXXXXXXXXXXXX-----DHMFFSELMKEASDIAGCFSSRARHLLHLHVASGMQRYVL 115
D MFF ELMKEA+DIAG F SR RHLLHLHVA+GMQRY++
Sbjct: 52 PSATSSSLSDSCECKACPWCDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMI 111
Query: 116 RIRQCFKNDQTAMIEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNFKSKMRAEHIE 175
R+R+CF +++ A+++EG++LI+YI MNAIAIRKILKKYDKVH S NGKNFK KMRAE IE
Sbjct: 112 RLRRCFTDEKQALVQEGQILIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIE 171
Query: 176 LLQSPWLIELGGFYLNFNGL-NCGASSEFSGHFSFD-FNASRPVMTLALPSSIKLEYDLT 233
LL SPWLIELG FYLN +GL N G G + + N +PV+ L LP+SI+LEYDLT
Sbjct: 172 LLHSPWLIELGAFYLN-SGLDNVGNFKNSFGRVACENLNEDQPVLKLMLPNSIELEYDLT 230
Query: 234 CAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICRE 284
CA+CL+ VFNPYAL CGH+FC CACSAASV++F+G+K+A SKCPICRE
Sbjct: 231 CAICLETVFNPYALKCGHIFCNSCACSAASVLIFQGIKAAPRHSKCPICRE 281
>TAIR|locus:2024675 [details] [associations]
symbol:NLA "nitrogen limitation adaptation" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010167 "response
to nitrate" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0009626 "plant-type hypersensitive
response" evidence=IMP] [GO:0009627 "systemic acquired resistance"
evidence=IMP] [GO:0009697 "salicylic acid biosynthetic process"
evidence=IMP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0010337 "regulation of salicylic acid metabolic
process" evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0080021 "response to benzoic acid stimulus"
evidence=IEP;IMP] [GO:0006817 "phosphate ion transport"
evidence=RCA] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0016607
GO:GO:0042742 GO:GO:0008270 GO:GO:0009627 GO:GO:0009751
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009626 GO:GO:0004842
InterPro:IPR017907 HOGENOM:HOG000240281 KO:K16275
ProtClustDB:CLSN2687631 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 EMBL:DQ059096 EMBL:AC009525 EMBL:AK229396
EMBL:AY088823 EMBL:BT044616 IPI:IPI00533758 IPI:IPI00891550
PIR:H86158 RefSeq:NP_001117218.1 RefSeq:NP_563667.1
UniGene:At.22880 UniGene:At.46895 ProteinModelPortal:Q9SRX9
SMR:Q9SRX9 STRING:Q9SRX9 EnsemblPlants:AT1G02860.1 GeneID:839559
KEGG:ath:AT1G02860 TAIR:At1g02860 eggNOG:NOG291077
InParanoid:Q9SRX9 OMA:CYMCACS PhylomeDB:Q9SRX9
Genevestigator:Q9SRX9 GO:GO:0010337 GO:GO:0080021 GO:GO:0010167
GO:GO:0009697 Uniprot:Q9SRX9
Length = 335
Score = 511 (184.9 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 98/221 (44%), Positives = 146/221 (66%)
Query: 76 DHMFFSELMKEASDIAGCFSSRARHLLHLHVASGMQRYVLRIR-QCFKNDQTAMIEEGRV 134
D FF EL+KE D+ G F+ A+ LL LH+ASG + + +R K D +I+EG+
Sbjct: 62 DGTFFPELLKEMEDVVGWFNEHAQKLLELHLASGFTKCLTWLRGNSRKKDHHGLIQEGKD 121
Query: 135 LIEYIIMNAIAIRKILKKYDKVHKSVNGKNFKSKMRAEHIELLQSPWLIELGGFYLNFNG 194
L+ Y ++NA+AIRKILKKYDK+H+S G+ FK++++ IE+LQSPWL EL F++N
Sbjct: 122 LVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEILQSPWLCELMAFHINLKE 181
Query: 195 LNCGASSEFSG-----HFSFD-----FNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNP 244
+ + + H FD F+ +P+++ L S+K++ DLTC++CLD VF+P
Sbjct: 182 SKKESGATITSPPPPVHALFDGCALTFDDGKPLLSCELSDSVKVDIDLTCSICLDTVFDP 241
Query: 245 YALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
+L+CGH++C +CACSAASV V +GLK+A KCP+CRE+
Sbjct: 242 ISLTCGHIYCYMCACSAASVNVVDGLKTAEATEKCPLCRED 282
Score = 78 (32.5 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1 MKFGETFTEYLHGDQERFLDKCSHVEYKRLKKVLKSCR 38
MKF + + EY+ G +E+ V +K+LKK+LK CR
Sbjct: 1 MKFCKKYEEYMQGQKEK--KNLPGVGFKKLKKILKRCR 36
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 130 (50.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 224 SSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
+S LE +LTC++CL L NP +L CGH FCK C V + A CP+CR
Sbjct: 10 ASSSLEDELTCSICLSLYKNPVSLCCGHSFCKQCVQK-----VLSNQQQAKASYSCPLCR 64
Query: 284 EEL 286
+L
Sbjct: 65 VDL 67
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 110 (43.8 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREEL 286
LE ++TC++CLD + +P + CGH+FC+ C V G + P K P +E +
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCT---TDVRPISGSRPVCPLCKKPFKKENI 65
>TAIR|locus:2128746 [details] [associations]
symbol:RMA1 "RING membrane-anchor 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0032527
"protein exit from endoplasmic reticulum" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0032940 "secretion by cell"
evidence=IGI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032940 GO:GO:0016020
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907
HSSP:P38398 EMBL:AF071527 EMBL:AL161497 GO:GO:0032527 EMBL:AB008518
EMBL:BT003833 EMBL:BT005188 IPI:IPI00517108 PIR:T52142
RefSeq:NP_192260.1 RefSeq:NP_974506.1 UniGene:At.239
ProteinModelPortal:O64425 SMR:O64425 IntAct:O64425 STRING:O64425
PRIDE:O64425 EnsemblPlants:AT4G03510.1 EnsemblPlants:AT4G03510.2
GeneID:825654 KEGG:ath:AT4G03510 TAIR:At4g03510 eggNOG:NOG283810
HOGENOM:HOG000238304 InParanoid:O64425 KO:K10666 OMA:CKSKVSH
PhylomeDB:O64425 ProtClustDB:CLSN2685946 Genevestigator:O64425
Uniprot:O64425
Length = 249
Score = 126 (49.4 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 202 EFSGHFSFDFNASRPV-MTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACS 260
E G +F F + +P +T+++PS + + C +CLD V P CGHLFC C
Sbjct: 15 ELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHK 74
Query: 261 AASVMVFEGLKSASPDSKCPICREELA 287
V F +CP+C+ +++
Sbjct: 75 WLDVQSFSTSDEYQRHRQCPVCKSKVS 101
>MGI|MGI:1196437 [details] [associations]
symbol:Hltf "helicase-like transcription factor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 UniPathway:UPA00143 MGI:MGI:1196437
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006357
GO:GO:0006351 GO:GO:0016568 GO:GO:0016887 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
EMBL:AF010138 EMBL:AF010600 EMBL:BC039796 EMBL:BC057116
EMBL:BC059240 IPI:IPI00315178 RefSeq:NP_033236.2 RefSeq:NP_659208.2
UniGene:Mm.209650 ProteinModelPortal:Q6PCN7 SMR:Q6PCN7
STRING:Q6PCN7 PhosphoSite:Q6PCN7 PRIDE:Q6PCN7
Ensembl:ENSMUST00000002502 GeneID:20585 KEGG:mmu:20585
UCSC:uc008osk.1 GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619
InParanoid:Q6PCN7 OrthoDB:EOG47SSD6 NextBio:298877 Bgee:Q6PCN7
CleanEx:MM_HLTF Genevestigator:Q6PCN7 GermOnline:ENSMUSG00000002428
Uniprot:Q6PCN7
Length = 1003
Score = 135 (52.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 45/163 (27%), Positives = 74/163 (45%)
Query: 129 IEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNF-KSKMRAEHIELLQSPWLIELGG 187
+ E +V I++I ++ RKI + K+ G+ F + + A + ++L L+ L
Sbjct: 652 LPERKVFIQHITLSEEE-RKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGL--LLRLRQ 708
Query: 188 FYLNFNGLNCGASSEFSGHFSFDFNAS-RPVMTLALPSSIKLEYDLTCAVCLDLVFNPYA 246
+ + L G SS SG D R ++ + + D CA+CLD + P
Sbjct: 709 ICCHTHLLTNGMSS--SGPSRSDTPEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVI 766
Query: 247 LSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELAGN 289
C H+FCK C C + S P +KCP+CR E+ G+
Sbjct: 767 THCAHVFCKPCICQV--------IHSEQPHAKCPLCRNEIHGD 801
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 122 (48.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
+ +E ++TC +CL+L+ P +L CGH FC+ AC A + E + + +S CP+C+
Sbjct: 7 VDIEKEVTCPICLELLTEPLSLDCGHSFCQ--ACITAKIK--ESVIISRGESSCPVCQTR 62
Query: 286 LA-GN 289
GN
Sbjct: 63 FQPGN 67
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 122 (48.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
+ +E ++TC +CL+L+ P +L CGH FC+ AC A + E + + +S CP+C+
Sbjct: 7 VDIEKEVTCPICLELLTEPLSLDCGHSFCQ--ACITAKIK--ESVIISRGESSCPVCQTR 62
Query: 286 LA-GN 289
GN
Sbjct: 63 FQPGN 67
>UNIPROTKB|E2R9I5 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006357
GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:6596 KO:K15711 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:AAEX03013671 RefSeq:XP_534300.3 Ensembl:ENSCAFT00000013176
GeneID:477106 KEGG:cfa:477106 Uniprot:E2R9I5
Length = 1007
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/163 (25%), Positives = 79/163 (48%)
Query: 129 IEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNF-KSKMRAEHIELLQSPWLIELGG 187
+ E +V I++I ++ RKI + ++ G+ F + + A + ++L L+ L
Sbjct: 656 LPERKVFIQHITLSDEE-RKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL--LLRLRQ 712
Query: 188 FYLNFNGL-NCGASSEFSGHFSFDFNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYA 246
+ + L N G+SS SG+ + + + + + L + D CA+CLD + P
Sbjct: 713 ICCHTHLLTNAGSSSGPSGNDTPEELRKKLIRKMKL--ILSSGSDEECAICLDSLTVPVI 770
Query: 247 LSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELAGN 289
C H+FCK C C +++ P +KCP+CR ++ G+
Sbjct: 771 THCAHVFCKPCICQV--------IQNEQPHAKCPLCRNDIHGD 805
>UNIPROTKB|E1BM69 [details] [associations]
symbol:LOC516599 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:DAAA02040907 IPI:IPI00838178
Ensembl:ENSBTAT00000006913 OMA:MANSENE Uniprot:E1BM69
Length = 497
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 220 LALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKC 279
+A + L+ ++TC +CL+L+ P +L CGH FC++C + ++ E L KC
Sbjct: 1 MASEKLVSLQDEVTCPICLELLTEPLSLDCGHSFCQICITANSN----ESLTGQERARKC 56
Query: 280 PICR 283
P+CR
Sbjct: 57 PVCR 60
>UNIPROTKB|G5E5Y3 [details] [associations]
symbol:G5E5Y3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
GeneTree:ENSGT00690000101646 EMBL:DAAA02040903
Ensembl:ENSBTAT00000040169 Uniprot:G5E5Y3
Length = 470
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
+ L+ ++TC +CL L+ P +L CGH FC+ AC A+ +V + D +CP+CR
Sbjct: 7 VNLQGEVTCPICLQLLTEPLSLDCGHSFCQ--ACITANNLV--SMNDQDEDRRCPVCR 60
>UNIPROTKB|F1PIL1 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AAEX03013096
Ensembl:ENSCAFT00000006908 Uniprot:F1PIL1
Length = 455
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/58 (46%), Positives = 30/58 (51%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FCK C V L ASP KCP CR+E
Sbjct: 52 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGTVRNSLWRASP-FKCPTCRKE 108
>UNIPROTKB|F1MLM2 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:DAAA02002705 EMBL:DAAA02002706 IPI:IPI00883352
Ensembl:ENSBTAT00000034508 Uniprot:F1MLM2
Length = 1009
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 42/163 (25%), Positives = 78/163 (47%)
Query: 129 IEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNF-KSKMRAEHIELLQSPWLIELGG 187
+ E +V I++I ++ RKI + K+ G+ F + + A + ++L L+ L
Sbjct: 658 LPERKVFIQHITLSDEE-RKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGL--LLRLRQ 714
Query: 188 FYLNFNGL-NCGASSEFSGHFSFDFNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYA 246
+ + L N +SS SG+ + + + + + L + D CA+CLD + P
Sbjct: 715 ICCHTHLLANAVSSSGPSGNDTPEELRKKLIKKMKL--ILSSGSDEECAICLDSLMAPVI 772
Query: 247 LSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELAGN 289
C H+FCK C C +++ P +KCP+CR ++ G+
Sbjct: 773 THCAHVFCKPCICQV--------IQNEQPHAKCPLCRNDIHGD 807
>UNIPROTKB|C9JWC5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00657693 ProteinModelPortal:C9JWC5 SMR:C9JWC5 STRING:C9JWC5
Ensembl:ENST00000454828 UCSC:uc009yet.2 ArrayExpress:C9JWC5
Bgee:C9JWC5 Uniprot:C9JWC5
Length = 305
Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
+ +E ++TC +CL+L+ P +L CGH FC+ AC A + E + + +S CP+C+
Sbjct: 7 VDIEKEVTCPICLELLTEPLSLDCGHSFCQ--ACITAKIK--ESVIISRGESSCPVCQTR 62
Query: 286 LA-GN 289
GN
Sbjct: 63 FQPGN 67
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 110 (43.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREEL 286
LE ++TC++CLD + +P + CGH+FC+ C V G + P K P +E +
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCT---TDVRPISGSRPVCPLCKKPFKKENI 65
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 110 (43.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREEL 286
LE ++TC++CLD + +P + CGH+FC+ C V G + P K P +E +
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCT---TDVRPISGSRPVCPLCKKPFKKENI 65
>TAIR|locus:2086666 [details] [associations]
symbol:AT3G27330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008166 Pfam:PF01697 IPI:IPI00542360 RefSeq:NP_189369.1
UniGene:At.5839 ProteinModelPortal:F4IWG7 SMR:F4IWG7 PRIDE:F4IWG7
EnsemblPlants:AT3G27330.1 GeneID:822354 KEGG:ath:AT3G27330
OMA:CRQLIGN ArrayExpress:F4IWG7 Uniprot:F4IWG7
Length = 913
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 30/70 (42%), Positives = 38/70 (54%)
Query: 220 LALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKC 279
+ LP KL +L+CA+CL++ F P +CGH FCK C SAA K KC
Sbjct: 710 VVLPCIDKLRDELSCAICLEICFEPSTTTCGHSFCKKCLRSAAD-------KCGR---KC 759
Query: 280 PICREELAGN 289
P CR+ L GN
Sbjct: 760 PKCRQ-LIGN 768
>UNIPROTKB|A6NL11 [details] [associations]
symbol:TRIM15 "Tripartite motif-containing protein 15"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:AL844220
EMBL:BX005441 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 HGNC:HGNC:16284 eggNOG:NOG325308 ChiTaRS:TRIM15
EMBL:CR388382 EMBL:AL671855 EMBL:AL845450 IPI:IPI00034456
SMR:A6NL11 STRING:A6NL11 Ensembl:ENST00000376688
Ensembl:ENST00000548212 Ensembl:ENST00000548642
Ensembl:ENST00000549109 Ensembl:ENST00000550400
Ensembl:ENST00000551636 Ensembl:ENST00000552676
Ensembl:ENST00000552836 HOGENOM:HOG000293220 HOVERGEN:HBG099343
Uniprot:A6NL11
Length = 115
Score = 101 (40.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 221 ALPSSIKLEYDL-TCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKC 279
A PS +K+ ++L C +C + + + CGH FC+LC A S M G +S+ C
Sbjct: 3 ATPS-LKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCL-PALSQM---GAQSSGKILLC 57
Query: 280 PICREE 285
P+C+EE
Sbjct: 58 PLCQEE 63
>UNIPROTKB|Q32L60 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0097038 "perinuclear endoplasmic
reticulum" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0010332 GO:GO:0004871
GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
GO:GO:0097038 GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865
GO:GO:0016239 CTD:10206 KO:K12003 EMBL:DAAA02032918 EMBL:BC109749
IPI:IPI00690395 RefSeq:NP_001033254.1 UniGene:Bt.5644
ProteinModelPortal:Q32L60 Ensembl:ENSBTAT00000010745 GeneID:535190
KEGG:bta:535190 GeneTree:ENSGT00690000101726 HOGENOM:HOG000290663
OMA:QPLNIFC NextBio:20876654 Uniprot:Q32L60
Length = 407
Score = 121 (47.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/58 (44%), Positives = 30/58 (51%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FCK C V L +SP KCP CR+E
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGNVRNSLWRSSP-FKCPTCRKE 60
>UNIPROTKB|F1RK25 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 CTD:10206 KO:K12003
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:GACC01000004
RefSeq:XP_003131013.1 Ensembl:ENSSSCT00000010288 GeneID:100153839
KEGG:ssc:100153839 Uniprot:F1RK25
Length = 407
Score = 121 (47.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/58 (44%), Positives = 30/58 (51%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FCK C V L +SP KCP CR+E
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRSSP-FKCPTCRKE 60
>UNIPROTKB|Q8IYM9 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0009615 "response to virus"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0003714 GO:GO:0019048
GO:GO:0006955 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0016567
GO:GO:0051607 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0015030 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 EMBL:X82200
EMBL:BC022281 EMBL:BC035582 IPI:IPI00477398 IPI:IPI00477812
PIR:A57041 RefSeq:NP_001186502.1 RefSeq:NP_006065.2
UniGene:Hs.501778 UniGene:Hs.684559 UniGene:Hs.733231
ProteinModelPortal:Q8IYM9 SMR:Q8IYM9 IntAct:Q8IYM9
MINT:MINT-2868217 STRING:Q8IYM9 PhosphoSite:Q8IYM9 DMDM:47606181
PaxDb:Q8IYM9 PRIDE:Q8IYM9 DNASU:10346 Ensembl:ENST00000379965
GeneID:10346 KEGG:hsa:10346 UCSC:uc001mbr.3 UCSC:uc009yes.3
CTD:10346 GeneCards:GC11P005667 HGNC:HGNC:16379 HPA:HPA003307
HPA:HPA003575 MIM:606559 neXtProt:NX_Q8IYM9 PharmGKB:PA38129
eggNOG:NOG258942 InParanoid:Q8IYM9 OMA:HQTFRIN ChiTaRS:TRIM22
GenomeRNAi:10346 NextBio:39235 ArrayExpress:Q8IYM9 Bgee:Q8IYM9
CleanEx:HS_TRIM22 Genevestigator:Q8IYM9 GermOnline:ENSG00000132274
Uniprot:Q8IYM9
Length = 498
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
+ +E ++TC +CL+L+ P +L CGH FC+ AC A + E + + +S CP+C+
Sbjct: 7 VDIEKEVTCPICLELLTEPLSLDCGHSFCQ--ACITAKIK--ESVIISRGESSCPVCQTR 62
Query: 286 LA-GN 289
GN
Sbjct: 63 FQPGN 67
>UNIPROTKB|H7C5K0 [details] [associations]
symbol:HLTF "Helicase-like transcription factor"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 PROSITE:PS51192 HGNC:HGNC:11099 EMBL:AC021059
ProteinModelPortal:H7C5K0 Ensembl:ENST00000467858 Bgee:H7C5K0
Uniprot:H7C5K0
Length = 425
Score = 121 (47.7 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 41/164 (25%), Positives = 76/164 (46%)
Query: 129 IEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNF-KSKMRAEHIELLQSPWLIELGG 187
+ E +V I++I ++ RKI + ++ G+ F + + A + ++L L+ L
Sbjct: 122 LPERKVFIQHITLSDEE-RKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL--LLRLRQ 178
Query: 188 F----YLNFNGLNCGASSEFS-GHFSFDFNASRPVMTLALPSSIKLEYDLTCAVCLDLVF 242
YL N ++ S FS G+ + + + + + L + D CA+CLD +
Sbjct: 179 ICCHTYLLTNAVSSNGPSAFSLGNDTPEELRKKLIRKMKL--ILSSGSDEECAICLDSLT 236
Query: 243 NPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREEL 286
P C H+FCK C C +++ P +KCP+CR ++
Sbjct: 237 VPVITHCAHVFCKPCICQV--------IQNEQPHAKCPLCRNDI 272
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 99 (39.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICRE 284
L+ + +C+VCL+ + P + CGH FCK C +E L+ P CP+CR+
Sbjct: 23 LQVEASCSVCLEYLKEPVIIECGHNFCKACI-----TRWWEDLERDFP---CPVCRK 71
>POMBASE|SPAC6B12.07c [details] [associations]
symbol:SPAC6B12.07c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAC6B12.07c Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 eggNOG:COG5574 PIR:T39014 RefSeq:NP_593762.2
EnsemblFungi:SPAC6B12.07c.1 GeneID:2543315 OrthoDB:EOG4SFDFM
NextBio:20804332 Uniprot:O14212
Length = 470
Score = 84 (34.6 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 212 NASRPV---MTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFE 268
NAS+ + ++ L S I D CA+C ++ + P L C H+FC C +++
Sbjct: 349 NASKAICFSLSSKLFSIIPQLRDFECAICSNVAYKPVRLGCSHVFCLHC------LII-- 400
Query: 269 GLKSASPDSKCPICR 283
L+ D CP+CR
Sbjct: 401 -LQKQKVDF-CPLCR 413
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1 MKFGETFTEYLHGDQERFLDKCSHVEYKRLKKVLK 35
MKFG F L D + + ++YK LKK +K
Sbjct: 1 MKFGHDFKRALENDMPPGWGEAA-IQYKALKKCIK 34
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 141 MNAIAIRKILKKYDK 155
MN +A+ KI+KK+DK
Sbjct: 311 MNKLAVTKIMKKFDK 325
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 76 DHMFFSELMKEASDIAG 92
DH FF +L E + G
Sbjct: 179 DHEFFEKLTSELQSVEG 195
>UNIPROTKB|H9KYY7 [details] [associations]
symbol:H9KYY7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02066798
Ensembl:ENSGALT00000001598 OMA:CLEKPQP Uniprot:H9KYY7
Length = 205
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 220 LALPSSIK-LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAA-SVMVFEGLKSASPDS 277
+A P ++ LE +LTC+VCLD+ NP +L CGH FC+ C S +GL S
Sbjct: 1 MAEPQVLEGLEEELTCSVCLDIYRNPVSLGCGHSFCEECIQGVLRSQHCPQGLFS----- 55
Query: 278 KCPIC 282
CP+C
Sbjct: 56 -CPLC 59
>MGI|MGI:1913847 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:1913847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 EMBL:CH466535
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC eggNOG:NOG238872
HOVERGEN:HBG056536 OrthoDB:EOG46MBJP EMBL:AY033605 EMBL:AK013959
EMBL:AK017850 EMBL:BC138576 EMBL:BC145915 EMBL:AF220129
EMBL:AF302839 IPI:IPI00111312 RefSeq:NP_001157692.1
RefSeq:NP_075722.1 UniGene:Mm.23959 ProteinModelPortal:Q9CYB0
SMR:Q9CYB0 STRING:Q9CYB0 PhosphoSite:Q9CYB0 PRIDE:Q9CYB0
Ensembl:ENSMUST00000039562 Ensembl:ENSMUST00000165015 GeneID:66597
KEGG:mmu:66597 InParanoid:Q9CYB0 NextBio:322120 Bgee:Q9CYB0
CleanEx:MM_TRIM13 Genevestigator:Q9CYB0
GermOnline:ENSMUSG00000035235 Uniprot:Q9CYB0
Length = 407
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 26/58 (44%), Positives = 29/58 (50%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FCK C V L SP KCP CR+E
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSP-FKCPTCRKE 60
>RGD|1307609 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA;ISO] [GO:0010942 "positive regulation of cell death"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy"
evidence=IEA;ISO] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA;ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=IEA;ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 UniPathway:UPA00143 RGD:1307609 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0010332 GO:GO:0004871 GO:GO:0010942
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC HOVERGEN:HBG056536
OrthoDB:EOG46MBJP EMBL:CH474023 EMBL:BC088425 IPI:IPI00198603
RefSeq:NP_001012210.1 UniGene:Rn.83735 ProteinModelPortal:Q5M7V1
PRIDE:Q5M7V1 Ensembl:ENSRNOT00000012035 GeneID:364398
KEGG:rno:364398 UCSC:RGD:1307609 eggNOG:maNOG12208
InParanoid:Q5M7V1 NextBio:685325 Genevestigator:Q5M7V1
Uniprot:Q5M7V1
Length = 407
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 26/58 (44%), Positives = 29/58 (50%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FCK C V L SP KCP CR+E
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSP-FKCPTCRKE 60
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|I3L8Y1 [details] [associations]
symbol:TRIM43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00670000097491 OMA:WSYPAGS
EMBL:FP565680 Ensembl:ENSSSCT00000030083 Uniprot:I3L8Y1
Length = 454
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 218 MTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDS 277
M +P++ + E LTC VCL+ + +P L CGH FC C C VF A +
Sbjct: 1 MASDIPAAFQKE--LTCLVCLNYLLDPVTLGCGHSFCWCCLC------VF--WDQAEEPA 50
Query: 278 KCPICREE 285
+CP+CR++
Sbjct: 51 RCPVCRQQ 58
>UNIPROTKB|E2QWA4 [details] [associations]
symbol:TRIM22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070206 "protein trimerization" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
KO:K11999 CTD:10346 EMBL:AAEX03012850 RefSeq:XP_542402.2
ProteinModelPortal:E2QWA4 Ensembl:ENSCAFT00000010123 GeneID:485284
KEGG:cfa:485284 OMA:EARIVSF NextBio:20859324 Uniprot:E2QWA4
Length = 494
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 223 PSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPIC 282
P+ ++ D+TC +CL+L+ P +L CGH FC+ AC A M E + CP+C
Sbjct: 4 PAQANIQKDVTCPICLELLTMPLSLDCGHSFCQ--ACITAKSM--ESGTHQGEEGTCPVC 59
Query: 283 R 283
+
Sbjct: 60 Q 60
>UNIPROTKB|J3KNZ3 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
Ensembl:ENST00000355586 Uniprot:J3KNZ3
Length = 175
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 227 KLEYDLTCAVCLDLVFNPYALSCGHLFCKLCA-CSAASVMVFEGLKSASPDSKCPICRE 284
KL+ + TC++CLD +P +CGH FC+ C S +G + CP CRE
Sbjct: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECRE 67
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 96 (38.9 bits), Expect = 0.00021, P = 0.00021
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
+ L+ + +C +CL+ + +P ++CGH FC+ C SV ++ L P CP+CR
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSCL----SVS-WKDLDDTFP---CPVCR 57
>UNIPROTKB|I3LM88 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:CU915669 EMBL:FP476099 Ensembl:ENSSSCT00000023239
Uniprot:I3LM88
Length = 1011
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 41/163 (25%), Positives = 78/163 (47%)
Query: 129 IEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNF-KSKMRAEHIELLQSPWLIELGG 187
+ E +V I++I ++ RKI + ++ G+ F + + A + ++L L+ L
Sbjct: 660 LPERKVFIQHITLSDEE-RKIYQSVKNDGRATIGRYFNEGTVLAHYADVLGL--LLRLRQ 716
Query: 188 FYLNFNGL-NCGASSEFSGHFSFDFNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYA 246
+ + L N +SS SG+ + + + + + L + D CA+CLD + P
Sbjct: 717 ICCHTHLLTNAVSSSGPSGNDTPEELRKKLIKKMKL--ILSSGSDEECAICLDSLTVPVI 774
Query: 247 LSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELAGN 289
C H+FCK C C +++ P +KCP+CR ++ G+
Sbjct: 775 THCAHVFCKPCICQV--------IQNEQPHAKCPLCRNDIHGD 809
>UNIPROTKB|G4N7F0 [details] [associations]
symbol:MGG_03582 "RING-14 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CM001234 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 RefSeq:XP_003716328.1 ProteinModelPortal:G4N7F0
EnsemblFungi:MGG_03582T0 GeneID:2676733 KEGG:mgr:MGG_03582
Uniprot:G4N7F0
Length = 461
Score = 84 (34.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 224 SSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
S++ D +C +C+ + + P L+C H+FC C M +G + +CP+CR
Sbjct: 356 STVPRVEDYSCPICMSIAWLPVRLACRHIFCVRCVVK----MQRDGKR------QCPMCR 405
Query: 284 EEL 286
+ +
Sbjct: 406 QNV 408
Score = 64 (27.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 1 MKFGETFTEYL--HGDQERFLDKCSHVEYKRLKKVLKSCRTCKGLHD 45
MKFG+ F E L G +++D S + Y +LKK LK R + LH+
Sbjct: 1 MKFGQEFKEVLLREGYPPKWVD--SAIPYGQLKKCLKKVR--RELHE 43
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 141 MNAIAIRKILKKYDK 155
+N A+ KILKK+DK
Sbjct: 304 INRTAVTKILKKFDK 318
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 214 SRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSA 273
+R V T+ + ++ ++TC +CL+L+ P ++ CGH FC+ AC A E +
Sbjct: 23 ARKVATMTSAVLVDIQDEVTCPICLELLTEPLSIDCGHSFCQ--ACITADNK--ESMPGQ 78
Query: 274 SPDSKCPICR 283
S+CP+C+
Sbjct: 79 EGQSRCPVCQ 88
Score = 116 (45.9 bits), Expect = 0.00090, P = 0.00090
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 214 SRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSA 273
S+ +AL + + L+ +++C +C +L+ P +L CGH FC+ C + + + G
Sbjct: 351 SQGAAAMALNTVMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGG---- 406
Query: 274 SPDSKCPICREELA-GN 289
DS CP+C + + GN
Sbjct: 407 --DSSCPVCGTQYSLGN 421
>POMBASE|SPBC3D6.11c [details] [associations]
symbol:slx8 "SUMO-targeted ubiquitin-protein ligase E3
Slx8 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000077 "DNA damage checkpoint" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006310 "DNA recombination" evidence=IGI] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0033234 "negative regulation of protein
sumoylation" evidence=IMP] [GO:0033768 "SUMO-targeted ubiquitin
ligase complex" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 PomBase:SPBC3D6.11c
Prosite:PS00518 GO:GO:0000077 GO:GO:0046872 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0033234 eggNOG:COG5574 GO:GO:0033768
EMBL:AB028016 PIR:T40371 RefSeq:NP_595523.1
ProteinModelPortal:P87176 MINT:MINT-4784040 STRING:P87176
EnsemblFungi:SPBC3D6.11c.1 GeneID:2540618 KEGG:spo:SPBC3D6.11c
OrthoDB:EOG44N22N NextBio:20801743 Uniprot:P87176
Length = 269
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 210 DFNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEG 269
+ P +PSS +L D C +CLD N CGH+FC C SA G
Sbjct: 183 EIEKEEPSKKQVVPSSQRLA-DYKCVICLDSPENLSCTPCGHIFCNFCILSAL------G 235
Query: 270 LKSASPDSKCPICREELAGN 289
+A+ KCP+CR ++ N
Sbjct: 236 TTAAT--QKCPVCRRKVHPN 253
>UNIPROTKB|O60858 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016239 "positive regulation of macroautophagy" evidence=IDA]
[GO:0097038 "perinuclear endoplasmic reticulum" evidence=IDA]
[GO:0010332 "response to gamma radiation" evidence=IEP] [GO:0010942
"positive regulation of cell death" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0007165
"signal transduction" evidence=IMP] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0005789 GO:GO:0046872
EMBL:CH471075 GO:GO:0043123 GO:GO:0008270 GO:GO:0010332
GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0097038 GO:GO:0004842 GO:GO:0009653
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 EMBL:AL137060
UniGene:Hs.436922 DNASU:10206 KEGG:hsa:10206 CTD:10206 KO:K12003
NextBio:38634 OMA:QPLNIFC EMBL:AJ224819 EMBL:AF279660 EMBL:AF220127
EMBL:AF220128 EMBL:AY191002 EMBL:AF241849 EMBL:AF241850
EMBL:AY455758 EMBL:AY764035 EMBL:AK314496 EMBL:BC003579
EMBL:BC063407 IPI:IPI00477161 IPI:IPI00607858 IPI:IPI00944555
RefSeq:NP_001007279.1 RefSeq:NP_005789.2 RefSeq:NP_434698.1
RefSeq:NP_998755.1 ProteinModelPortal:O60858 SMR:O60858
STRING:O60858 PhosphoSite:O60858 PaxDb:O60858 PRIDE:O60858
Ensembl:ENST00000298772 Ensembl:ENST00000356017
Ensembl:ENST00000378182 Ensembl:ENST00000378183
Ensembl:ENST00000420995 Ensembl:ENST00000442421
Ensembl:ENST00000457662 GeneID:10206 UCSC:uc001vdp.1
UCSC:uc001vdq.1 GeneCards:GC13P050570 HGNC:HGNC:9976 HPA:HPA000367
MIM:605661 neXtProt:NX_O60858 PharmGKB:PA162406947 eggNOG:NOG238872
HOVERGEN:HBG056536 InParanoid:O60858 OrthoDB:EOG46MBJP
PhylomeDB:O60858 GenomeRNAi:10206 Bgee:O60858 CleanEx:HS_TRIM13
Genevestigator:O60858 GermOnline:ENSG00000204977 Uniprot:O60858
Length = 407
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 25/58 (43%), Positives = 29/58 (50%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FCK C V L +P KCP CR+E
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAP-FKCPTCRKE 60
>ZFIN|ZDB-GENE-050522-516 [details] [associations]
symbol:trim13 "tripartite motif-containing 13"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-050522-516 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101726 EMBL:CU855930
Ensembl:ENSDART00000023210 Bgee:H9KUW1 Uniprot:H9KUW1
Length = 414
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSAS--PDSKCPICREE 285
LE DLTC +C L +P L C H FCK C + +G +S + P KCP CR+E
Sbjct: 14 LEEDLTCPICCCLFEDPRVLPCSHSFCKKCLEG-----ILDGNRSPTWRPPFKCPTCRKE 68
Query: 286 LAGN 289
N
Sbjct: 69 TVHN 72
>FB|FBgn0033828 [details] [associations]
symbol:CG17048 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE013599
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BT023636 RefSeq:NP_001188918.1
RefSeq:NP_610866.1 UniGene:Dm.26922 SMR:Q4QPY0 IntAct:Q4QPY0
EnsemblMetazoa:FBtr0087721 EnsemblMetazoa:FBtr0302450 GeneID:36479
KEGG:dme:Dmel_CG17048 UCSC:CG17048-RA FlyBase:FBgn0033828
eggNOG:NOG274494 InParanoid:Q4QPY0 OMA:CAFCLDH OrthoDB:EOG479CQZ
GenomeRNAi:36479 NextBio:798771 Uniprot:Q4QPY0
Length = 124
Score = 95 (38.5 bits), Expect = 0.00027, P = 0.00027
Identities = 21/53 (39%), Positives = 25/53 (47%)
Query: 234 CAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREEL 286
CA CLD + NP L C H FCK C + E + +CPICR L
Sbjct: 40 CAFCLDRIQNPEKLHCNHAFCKSCLA-----LYREARNWVA--KRCPICRSSL 85
>UNIPROTKB|H3BPQ8 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
ProteinModelPortal:H3BPQ8 SMR:H3BPQ8 Ensembl:ENST00000563313
Bgee:H3BPQ8 Uniprot:H3BPQ8
Length = 89
Score = 95 (38.5 bits), Expect = 0.00027, P = 0.00027
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 208 SFDFNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVF 267
+ D P+ + S+ + +C C D++ NP L+CGH FC+ C
Sbjct: 11 TMDLERDEPLKSTGPQISVS---EFSCHCCYDILVNPTTLNCGHSFCRHCLAL------- 60
Query: 268 EGLKSASPDSKCPICREELAG 288
++S ++CP CRE+ G
Sbjct: 61 --WWASSKKTECPECREKWEG 79
>UNIPROTKB|H3BRQ5 [details] [associations]
symbol:BFAR "Bifunctional apoptosis regulator" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HGNC:HGNC:17613 EMBL:AC009167
Ensembl:ENST00000570219 Bgee:H3BRQ5 Uniprot:H3BRQ5
Length = 109
Score = 95 (38.5 bits), Expect = 0.00027, P = 0.00027
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 208 SFDFNASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVF 267
+ D P+ + S+ + +C C D++ NP L+CGH FC+ C
Sbjct: 11 TMDLERDEPLKSTGPQISVS---EFSCHCCYDILVNPTTLNCGHSFCRHCLAL------- 60
Query: 268 EGLKSASPDSKCPICREELAG 288
++S ++CP CRE+ G
Sbjct: 61 --WWASSKKTECPECREKWEG 79
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 104 (41.7 bits), Expect = 0.00028, P = 0.00028
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
++ ++TC +CL+L+ P + C H FC+ C + +E ++ + CP+CR
Sbjct: 9 IKEEVTCPICLELLKEPVSTDCNHSFCRACI-----TINYESNRNTEGEGSCPVCR 59
>UNIPROTKB|B2RNG4 [details] [associations]
symbol:TRIM6-TRIM34 "TRIM6-TRIM34 readthrough transcript"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691 KO:K11999
UniGene:Hs.729048 HGNC:HGNC:10063 EMBL:BC136871 EMBL:BC140722
IPI:IPI00854740 RefSeq:NP_001003819.1 ProteinModelPortal:B2RNG4
SMR:B2RNG4 PRIDE:B2RNG4 Ensembl:ENST00000337072
Ensembl:ENST00000354852 GeneID:445372 KEGG:hsa:445372
UCSC:uc001mbf.3 CTD:445372 HGNC:HGNC:33440 OMA:ACITQNS
GenomeRNAi:445372 NextBio:111386 ArrayExpress:B2RNG4 Bgee:B2RNG4
Uniprot:B2RNG4
Length = 842
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 214 SRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCAC--SAASVMVFEGLK 271
+R V T+ P + + ++TC +CL+L+ P ++ CGH FC+ C SV+ EG +
Sbjct: 23 ARRVATMTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGER 82
Query: 272 SASPDSKCPICR 283
S CP+C+
Sbjct: 83 S------CPVCQ 88
>CGD|CAL0002668 [details] [associations]
symbol:TRY3 species:5476 "Candida albicans" [GO:0044011
"single-species biofilm formation on inanimate substrate"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:1900189 "positive regulation of cell
adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 104 (41.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 231 DLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELA 287
D +C +C+++ + P LSCGHLFC C +K S CP+CR+E A
Sbjct: 395 DYSCPICMNIAYKPIRLSCGHLFCVRCLVK---------MKQDDKTS-CPLCRKENA 441
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 135 LIEYIIMNAIAIRKILKKYDKVHKSVNGKN-FKSKMRAEHI 174
++++ +N A+RKIL K+DK S+ +N F + +HI
Sbjct: 328 ILQFHTINNEALRKILNKFDK-QTSLGIQNTFPQLISNDHI 367
>UNIPROTKB|Q5A1M4 [details] [associations]
symbol:CaO19.1971 "Potential zinc RING finger protein"
species:237561 "Candida albicans SC5314" [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:1900189 "positive regulation
of cell adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 104 (41.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 231 DLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELA 287
D +C +C+++ + P LSCGHLFC C +K S CP+CR+E A
Sbjct: 395 DYSCPICMNIAYKPIRLSCGHLFCVRCLVK---------MKQDDKTS-CPLCRKENA 441
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 135 LIEYIIMNAIAIRKILKKYDKVHKSVNGKN-FKSKMRAEHI 174
++++ +N A+RKIL K+DK S+ +N F + +HI
Sbjct: 328 ILQFHTINNEALRKILNKFDK-QTSLGIQNTFPQLISNDHI 367
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 94 (38.1 bits), Expect = 0.00035, P = 0.00035
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 231 DLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSK--CPICREEL 286
D+ C +C D V SCGH+FC C + S G +S + CP+CR+++
Sbjct: 48 DVECPICFDEVRRAITTSCGHVFCLECIERSISSSHARGQVRSSQRGRGLCPLCRKQV 105
>UNIPROTKB|E5RI62 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
IPI:IPI00975887 ProteinModelPortal:E5RI62 SMR:E5RI62
Ensembl:ENST00000520264 ArrayExpress:E5RI62 Bgee:E5RI62
Uniprot:E5RI62
Length = 50
Score = 94 (38.1 bits), Expect = 0.00035, P = 0.00035
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 227 KLEYDLTCAVCLDLVFNPYALSCGHLFCKLC 257
KL+ + TC++CLD +P +CGH FC+ C
Sbjct: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRAC 39
>UNIPROTKB|E1BKE6 [details] [associations]
symbol:TRIM43B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00670000097491 EMBL:DAAA02062434 EMBL:DAAA02062435
IPI:IPI00692821 Ensembl:ENSBTAT00000012117 OMA:TIFCEAN
Uniprot:E1BKE6
Length = 449
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 218 MTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDS 277
M +P + + E LTC VCL+ + +P + CGH FC+ C C + +E K P S
Sbjct: 1 MDSEIPEAFQKE--LTCLVCLNFLLDPVTIGCGHSFCRSCLC-----LFWEQAKV--PAS 51
Query: 278 KCPICRE 284
CP+CR+
Sbjct: 52 -CPVCRQ 57
>MGI|MGI:2137352 [details] [associations]
symbol:Trim6 "tripartite motif-containing 6" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070206 "protein
trimerization" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2137352
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 CTD:117854
EMBL:AK033396 EMBL:AK049238 EMBL:BC138965 EMBL:AF220031
IPI:IPI00407811 RefSeq:NP_001013637.1 UniGene:Mm.274843
ProteinModelPortal:Q8BGE7 SMR:Q8BGE7 PhosphoSite:Q8BGE7
PRIDE:Q8BGE7 Ensembl:ENSMUST00000098180 GeneID:94088 KEGG:mmu:94088
UCSC:uc009ivq.1 eggNOG:NOG238217 InParanoid:B2RSQ8 OMA:KSQMEPE
NextBio:352065 Bgee:Q8BGE7 CleanEx:MM_TRIM6 Genevestigator:Q8BGE7
Uniprot:Q8BGE7
Length = 488
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVF-EGLKSASPDSKCPICR 283
+ + ++TC +CL+L+ P ++ CGH FC++C ++ VF +G +S+ CP+CR
Sbjct: 7 VDIRDEVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSS-----CPVCR 60
>UNIPROTKB|Q3MJK3 [details] [associations]
symbol:TRIM5 "Tripartite motif protein TRIM5" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG253216 KO:K10648
IPI:IPI00838178 EMBL:DAAA02040905 EMBL:AY970972 EMBL:DQ381151
RefSeq:NP_001029970.1 UniGene:Bt.107577 SMR:Q3MJK3
Ensembl:ENSBTAT00000005971 GeneID:616948 KEGG:bta:616948
InParanoid:Q3MJK3 OMA:KEERTSW NextBio:20900407 Uniprot:Q3MJK3
Length = 498
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC--ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C A + S++ EG +S CP+CR
Sbjct: 7 MNIQEEVTCPICLELLTEPLSLDCGHSFCQACITANNKESIIGQEGKRS------CPVCR 60
>UNIPROTKB|E1BSV9 [details] [associations]
symbol:LOC416146 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00580824 Ensembl:ENSGALT00000001825 OMA:QINTEEL
Uniprot:E1BSV9
Length = 314
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 220 LALPSSIK-LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAA-SVMVFEGLKSASPDS 277
+A P ++ LE +LTC+VCLD+ NP +L CGH FC+ C S +GL S
Sbjct: 1 MAEPQVLEGLEEELTCSVCLDIYRNPVSLGCGHSFCEECIQGVLRSQHCPQGLFS----- 55
Query: 278 KCPIC 282
CP+C
Sbjct: 56 -CPLC 59
>MGI|MGI:1923931 [details] [associations]
symbol:Trim12a "tripartite motif-containing 12A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1923931
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 EMBL:AF220126 EMBL:AK009769 IPI:IPI00469341
RefSeq:NP_076324.2 UniGene:Mm.458309 UniGene:Mm.486388
ProteinModelPortal:Q99PQ1 SMR:Q99PQ1 STRING:Q99PQ1 PRIDE:Q99PQ1
Ensembl:ENSMUST00000070943 Ensembl:ENSMUST00000106839 GeneID:76681
KEGG:mmu:76681 CTD:76681 eggNOG:NOG310455 NextBio:345615
Bgee:Q99PQ1 CleanEx:MM_TRIM12 Genevestigator:Q99PQ1
GermOnline:ENSMUSG00000066258 Uniprot:Q99PQ1
Length = 284
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
L+ ++TC VCL+L+ P + CGH FC+ C + FE +K CP+CR
Sbjct: 9 LKEEVTCPVCLNLMVKPVSADCGHTFCQGCI-----TLYFESIKCDKKVFICPVCR 59
>UNIPROTKB|F8W6N8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI01012489 ProteinModelPortal:F8W6N8 SMR:F8W6N8
Ensembl:ENST00000396853 ArrayExpress:F8W6N8 Bgee:F8W6N8
Uniprot:F8W6N8
Length = 327
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|Q58DK8 [details] [associations]
symbol:TRIM38 "Tripartite motif-containing protein 38"
species:9913 "Bos taurus" [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:BT021589 EMBL:BC104589
IPI:IPI00703175 RefSeq:NP_001029746.1 UniGene:Bt.36917
ProteinModelPortal:Q58DK8 PRIDE:Q58DK8 Ensembl:ENSBTAT00000024658
GeneID:531022 KEGG:bta:531022 CTD:10475 eggNOG:NOG271582
InParanoid:Q58DK8 KO:K12014 OMA:QITEWNE OrthoDB:EOG495ZRS
NextBio:20875371 ArrayExpress:Q58DK8 Uniprot:Q58DK8
Length = 460
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 224 SSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSK---CP 280
+S K+ + TC++CL L+ N ++SCGH +C +C S FE L +P K CP
Sbjct: 2 ASKKMREEATCSICLHLMTNAVSISCGHSYCHVCIVS-----FFENLNRMTPGLKTFSCP 56
Query: 281 ICR 283
CR
Sbjct: 57 QCR 59
>UNIPROTKB|F1PJM3 [details] [associations]
symbol:TRIM38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
EMBL:AAEX03017606 Ensembl:ENSCAFT00000017268 Uniprot:F1PJM3
Length = 463
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 223 PSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDS-KCPI 281
P + +++ + TCA+CL L+ P ++SCGH +C LC S + G SP+ CP
Sbjct: 5 PITKRMKGEATCAICLQLMSEPMSISCGHSYCTLCIISFLENL---GHAEPSPNMFPCPH 61
Query: 282 CR 283
CR
Sbjct: 62 CR 63
>UNIPROTKB|I3L6F8 [details] [associations]
symbol:TRIM7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 Ensembl:ENSSSCT00000026765 OMA:WERPSAG
Uniprot:I3L6F8
Length = 481
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 220 LALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCA--C----SAASVMVFEGLKSA 273
+ L + +L+ + TC++CL+L P ++ CGH FC+ C C SA V L +
Sbjct: 16 VXLALAAELQGEATCSICLELFREPVSVECGHSFCRACIARCWERPSAGPTTVSRTLPYS 75
Query: 274 SPDS-KCPICREELAG 288
P S CP CRE G
Sbjct: 76 LPCSLPCPQCREPXPG 91
>UNIPROTKB|A2AE48 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
eggNOG:NOG291505 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00798036 SMR:A2AE48 Ensembl:ENST00000412755
Ensembl:ENST00000416596 Ensembl:ENST00000422802
Ensembl:ENST00000423901 Ensembl:ENST00000438785
Ensembl:ENST00000446196 Ensembl:ENST00000446540
Ensembl:ENST00000449136 HOGENOM:HOG000088612 Uniprot:A2AE48
Length = 248
Score = 110 (43.8 bits), Expect = 0.00059, P = 0.00059
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREEL 286
LE ++TC++CLD + +P + CGH+FC+ C V G + P K P +E +
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCT---TDVRPISGSRPVCPLCKKPFKKENI 65
>UNIPROTKB|I3LG00 [details] [associations]
symbol:TRIM7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101808
Ensembl:ENSSSCT00000031979 Uniprot:I3LG00
Length = 477
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 222 LPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCA--C----SAASVMVFEGLKSASP 275
L + +L+ + TC++CL+L P ++ CGH FC+ C C SA V L + P
Sbjct: 16 LALAAELQGEATCSICLELFREPVSVECGHSFCRACIARCWERPSAGPTTVSRTLPYSLP 75
Query: 276 DS-KCPICREELAG 288
S CP CRE G
Sbjct: 76 CSLPCPQCREPXPG 89
>UNIPROTKB|F1NV67 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0010332
"response to gamma radiation" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005789 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0010332 GO:GO:0004871 GO:GO:0010942
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AADN02005382
IPI:IPI00811205 Ensembl:ENSGALT00000027478 Uniprot:F1NV67
Length = 410
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 25/58 (43%), Positives = 29/58 (50%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREE 285
LE DLTC +C L +P L C H FC+ C V L SP KCP CR+E
Sbjct: 6 LEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILDGNVRNVLWRPSP-FKCPTCRKE 62
>UNIPROTKB|F1N2E6 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00732393
UniGene:Bt.43398 ProteinModelPortal:F1N2E6
Ensembl:ENSBTAT00000007366 ArrayExpress:F1N2E6 Uniprot:F1N2E6
Length = 488
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 220 LALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKC 279
+AL + + L+ +++C +C +L+ P +L CGH FC+ C + + + G DS C
Sbjct: 1 MALNTVMNLQEEVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGG------DSSC 54
Query: 280 PICREELA-GN 289
P+C + + GN
Sbjct: 55 PVCGTQYSLGN 65
>UNIPROTKB|Q5D7I9 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:54133 "Pygathrix nemaeus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY843508 ProteinModelPortal:Q5D7I9
SMR:Q5D7I9 Uniprot:Q5D7I9
Length = 495
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC--ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C A S++ EG +S CP+CR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERS------CPVCR 60
>UNIPROTKB|Q5D7J0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:33548 "Colobus guereza" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY843507 EMBL:AY710298
ProteinModelPortal:Q5D7J0 SMR:Q5D7J0 Uniprot:Q5D7J0
Length = 495
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC--ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C A S++ EG +S CP+CR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERS------CPVCR 60
>ZFIN|ZDB-GENE-050522-17 [details] [associations]
symbol:trim35-1 "tripartite motif containing 35-1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-050522-17 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 eggNOG:NOG291077 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496
EMBL:BX469930 EMBL:BC095360 IPI:IPI00485397 RefSeq:NP_001018156.1
UniGene:Dr.108683 Ensembl:ENSDART00000073777 GeneID:553197
KEGG:dre:553197 CTD:553197 InParanoid:Q503E5 OMA:EACEINI
NextBio:20879991 Uniprot:Q503E5
Length = 507
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICRE 284
+ LE DL+CAVC D+ +P L CGH FC+ C +++ S+S CPICR+
Sbjct: 1 MSLEDDLSCAVCTDVFRDPVLLGCGHSFCRQC--------IYDHW-SSSGTRNCPICRQ 50
>RGD|1309031 [details] [associations]
symbol:Hltf "helicase-like transcription factor" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 RGD:1309031 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00372747
Ensembl:ENSRNOT00000000095 UCSC:RGD:1309031 ArrayExpress:F1LT77
Uniprot:F1LT77
Length = 1004
Score = 117 (46.2 bits), Expect = 0.00086, P = 0.00086
Identities = 39/168 (23%), Positives = 71/168 (42%)
Query: 129 IEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNF-KSKMRAEHIELLQSPWLIELGG 187
+ E +V I++I ++ + RKI + K+ + F + + A + ++L G
Sbjct: 653 LPERKVFIQHITLS-VEERKIYQSVKNEGKATIARYFTEGTVLAHYADVL---------G 702
Query: 188 FYLNFNGLNCGASSEFSGHFSFDFNAS------RPVMTLALPSSIKLEYDLTCAVCLDLV 241
L + C +G S D + S R ++ + + D C++CLD +
Sbjct: 703 LLLRLRQICCHVHLPTNGTSSSDPSRSDTPEELRKMLVTKMKLILSSGSDEECSICLDSL 762
Query: 242 FNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICREELAGN 289
P C H+FCK C C ++ P +KCP+CR + G+
Sbjct: 763 TFPVITHCAHVFCKPCICQV--------IQREQPHAKCPLCRSNIHGH 802
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 99 (39.9 bits), Expect = 0.00089, P = 0.00089
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 228 LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICRE 284
L+ + +C+VCL+ + P + CGH FCK C +E L+ P CP+CR+
Sbjct: 23 LQVEASCSVCLEYLKEPVIIECGHNFCKACI-----TRWWEDLERDFP---CPVCRK 71
>ZFIN|ZDB-GENE-090511-2 [details] [associations]
symbol:btr01 "bloodthirsty-related gene family,
member 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090511-2 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CU929294 IPI:IPI00773115
Ensembl:ENSDART00000073689 Bgee:F1QYX5 Uniprot:F1QYX5
Length = 565
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 219 TLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSK 278
T++ P E TC++CLD+ NP + CGH FC C S +EG
Sbjct: 4 TMSFPGEFLSEEQFTCSICLDIFTNPVSTPCGHSFCSSCISS-----YWEG---QGKTCF 55
Query: 279 CPICRE 284
CP+C+E
Sbjct: 56 CPLCKE 61
>UNIPROTKB|I3LH17 [details] [associations]
symbol:I3LH17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
OMA:WILGVCA Ensembl:ENSSSCT00000029217 Uniprot:I3LH17
Length = 483
Score = 113 (44.8 bits), Expect = 0.00093, P = 0.00093
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 231 DLTCAVCLDLVFNPYALSCGHLFCKLCAC--SAASVMVFEGLKSASPDSKCPICR 283
++TC +CL+L+ P +L CGH FC+ C S S+M EG S CP+CR
Sbjct: 12 EVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEG------KSNCPVCR 60
>UNIPROTKB|F1N541 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 KO:K11999
CTD:117854 EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00883463
RefSeq:NP_001192118.1 UniGene:Bt.111657 Ensembl:ENSBTAT00000015712
GeneID:514492 KEGG:bta:514492 OMA:HHKHEYR NextBio:20871361
ArrayExpress:F1N541 Uniprot:F1N541
Length = 487
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P ++ CGH FC+ AC A E + S+CP+C+
Sbjct: 7 VDIQDEVTCPICLELLTEPLSIDCGHSFCQ--ACITADNK--ESMPGQEGQSRCPVCQ 60
>UNIPROTKB|F1RLV7 [details] [associations]
symbol:LOC100738990 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000016021 OMA:HGEGGIS Uniprot:F1RLV7
Length = 492
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 231 DLTCAVCLDLVFNPYALSCGHLFCKLCAC--SAASVMVFEGLKSASPDSKCPICR 283
++TC +CL+L+ P +L CGH FC+ C S S+M EG S CP+CR
Sbjct: 12 EVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEG------KSNCPVCR 60
>UNIPROTKB|A6NLP3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005794 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691
EMBL:AC025016 EMBL:AC131574 HOVERGEN:HBG001357 HOGENOM:HOG000234134
HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341 IPI:IPI00394971
ProteinModelPortal:A6NLP3 SMR:A6NLP3 IntAct:A6NLP3 STRING:A6NLP3
PRIDE:A6NLP3 Ensembl:ENST00000305836 ArrayExpress:A6NLP3
Bgee:A6NLP3 Uniprot:A6NLP3
Length = 493
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|Q9C035 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0008329
"pattern recognition receptor activity" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IDA]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0019048 EMBL:CH471064
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
EMBL:AC015691 HOVERGEN:HBG001357 OrthoDB:EOG4229JJ GO:GO:0031664
EMBL:AF220025 EMBL:AF220026 EMBL:AF220027 EMBL:AF220028
EMBL:AF220029 EMBL:AY625000 EMBL:DQ301444 EMBL:DQ301445
EMBL:DQ301446 EMBL:DQ301447 EMBL:DQ301448 EMBL:DQ301449
EMBL:DQ301450 EMBL:DQ301451 EMBL:DQ301452 EMBL:DQ301453
EMBL:DQ301454 EMBL:DQ301455 EMBL:DQ301456 EMBL:DQ301457
EMBL:DQ301458 EMBL:DQ301459 EMBL:DQ301460 EMBL:DQ301461
EMBL:DQ301462 EMBL:DQ301463 EMBL:DQ301464 EMBL:DQ301465
EMBL:DQ301466 EMBL:DQ301467 EMBL:DQ301468 EMBL:DQ301469
EMBL:DQ301470 EMBL:DQ301471 EMBL:DQ301472 EMBL:DQ301473
EMBL:DQ301474 EMBL:DQ301475 EMBL:DQ301476 EMBL:DQ301477
EMBL:DQ301478 EMBL:DQ301479 EMBL:DQ301480 EMBL:DQ288685
EMBL:JF928461 EMBL:JF928462 EMBL:AK027593 EMBL:EU260465
EMBL:BC021258 IPI:IPI00394972 IPI:IPI00394973 IPI:IPI00394974
IPI:IPI00394975 IPI:IPI00873422 RefSeq:NP_149023.2
RefSeq:NP_149083.2 RefSeq:NP_149084.2 UniGene:Hs.125300 PDB:2ECV
PDB:2YRG PDBsum:2ECV PDBsum:2YRG ProteinModelPortal:Q9C035
SMR:Q9C035 IntAct:Q9C035 STRING:Q9C035 PhosphoSite:Q9C035
DMDM:38605459 PaxDb:Q9C035 PRIDE:Q9C035 DNASU:85363
Ensembl:ENST00000380027 Ensembl:ENST00000380034
Ensembl:ENST00000396847 Ensembl:ENST00000396855
Ensembl:ENST00000433961 GeneID:85363 KEGG:hsa:85363 UCSC:uc001mbm.2
UCSC:uc001mbn.3 UCSC:uc001mbp.3 CTD:85363 GeneCards:GC11M005641
H-InvDB:HIX0009393 HGNC:HGNC:16276 HPA:CAB013497 HPA:HPA023420
HPA:HPA023422 MIM:608487 neXtProt:NX_Q9C035 PharmGKB:PA38109
eggNOG:NOG253216 KO:K10648 OMA:WILGVCA ChiTaRS:TRIM5
EvolutionaryTrace:Q9C035 GenomeRNAi:85363 NextBio:75883
ArrayExpress:Q9C035 Bgee:Q9C035 Genevestigator:Q9C035
GermOnline:ENSG00000132256 Uniprot:Q9C035
Length = 493
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|Q1ACD8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9597 "Pan paniscus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229282 ProteinModelPortal:Q1ACD8 SMR:Q1ACD8
Uniprot:Q1ACD8
Length = 493
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|Q3ZEE5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9580 "Hylobates lar" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY923180 ProteinModelPortal:Q3ZEE5
SMR:Q3ZEE5 Uniprot:Q3ZEE5
Length = 493
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDSK--CPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ AC A+ K++ PD + CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQ--ACLTANH------KTSMPDGERSCPVCR 58
>UNIPROTKB|Q5C8T6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9595 "Gorilla gorilla gorilla" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY899872 EMBL:AY899866 EMBL:AY899867
EMBL:AY899868 EMBL:AY899869 EMBL:AY899870 EMBL:AY899871
EMBL:AY710300 EMBL:AY740620 EMBL:DQ298178 EMBL:AY843510
EMBL:AY923178 EMBL:DQ437600 ProteinModelPortal:Q5C8T6 SMR:Q5C8T6
Uniprot:Q5C8T6
Length = 493
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKG------ESSCPVCR 59
>UNIPROTKB|Q5D7J1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9598 "Pan troglodytes" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 HSSP:Q14134 GO:GO:0031664 CTD:85363
eggNOG:NOG253216 KO:K10648 EMBL:AH014830 EMBL:AY740617
EMBL:AY843506 EMBL:DQ298177 EMBL:AY923177 EMBL:DQ437595
RefSeq:NP_001012668.1 UniGene:Ptr.6259 ProteinModelPortal:Q5D7J1
SMR:Q5D7J1 STRING:Q5D7J1 GeneID:503563 KEGG:ptr:503563
NextBio:20866205 Uniprot:Q5D7J1
Length = 493
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 226 IKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPDSKCPICR 283
+ ++ ++TC +CL+L+ P +L CGH FC+ C + M+ +G +S CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG------ESSCPVCR 59
>UNIPROTKB|Q5BN31 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:39432 "Saimiri boliviensis boliviensis" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0002218
"activation of innate immune response" evidence=ISS] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740614 EMBL:AY928202
ProteinModelPortal:Q5BN31 SMR:Q5BN31 PRIDE:Q5BN31 Uniprot:Q5BN31
Length = 494
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 218 MTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLC-ACSAASVMVFEGLKSASPD 276
M + SIK E +TC +CL+L+ P +L CGH FC+ C + M+ +G +S
Sbjct: 1 MASGILGSIKEE--VTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERS---- 54
Query: 277 SKCPICR 283
CP+CR
Sbjct: 55 --CPLCR 59
>UNIPROTKB|G3N137 [details] [associations]
symbol:G3N137 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101726 EMBL:DAAA02071445
Ensembl:ENSBTAT00000063393 OMA:PAFQCPT Uniprot:G3N137
Length = 160
Score = 102 (41.0 bits), Expect = 0.00097, P = 0.00097
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 212 NASRPVMTLALPSSIKLEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLK 271
NAS + +L + + LE +LTC +CL+L +P L C H C CA G +
Sbjct: 2 NASAGLFSLKMET---LESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSG-E 57
Query: 272 SASPDS--KCPICREELAGN 289
S P + +CP CR ++ N
Sbjct: 58 SIEPITAFQCPTCRYVISLN 77
>ZFIN|ZDB-GENE-080219-8 [details] [associations]
symbol:btr05 "bloodthirsty-related gene family,
member 5" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-8 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00834702
RefSeq:XP_003198957.1 UniGene:Dr.117914 Ensembl:ENSDART00000076300
GeneID:794264 KEGG:dre:794264 CTD:794264 NextBio:20931784
Bgee:F1QZD0 Uniprot:F1QZD0
Length = 505
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00099
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 219 TLALPSSIK-LEYDLTCAVCLDLVFNPYALSCGHLFCKLCACSAASVMVFEGLKSASPDS 277
+L+L SS++ L +L C+VCLD+ +P + CGH FCK C S+ +E + S
Sbjct: 22 SLSLSSSMRPLFEELQCSVCLDVFTDPVSTPCGHNFCKSCLNSS-----WENSQVCS--- 73
Query: 278 KCPICREELA 287
CP+CRE +
Sbjct: 74 -CPLCRERFS 82
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 289 274 0.00078 115 3 11 22 0.42 33
33 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 610 (65 KB)
Total size of DFA: 220 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.82u 0.15s 21.97t Elapsed: 00:00:01
Total cpu time: 21.83u 0.15s 21.98t Elapsed: 00:00:01
Start: Sat May 11 05:51:39 2013 End: Sat May 11 05:51:40 2013