BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022991
(289 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2MVP8|FITM1_PIG Fat storage-inducing transmembrane protein 1 OS=Sus scrofa GN=FITM1
PE=2 SV=1
Length = 290
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 69 HGNYFNLRLQGELWGWACFFIG 90
HGN+FN++ WGW C F+G
Sbjct: 83 HGNFFNIKFVNSAWGWTCTFLG 104
>sp|Q91V79|FITM1_MOUSE Fat storage-inducing transmembrane protein 1 OS=Mus musculus
GN=Fitm1 PE=1 SV=1
Length = 292
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 69 HGNYFNLRLQGELWGWACFFIG 90
HGN+FN++ WGW C F+G
Sbjct: 83 HGNFFNIKFVNSAWGWTCTFLG 104
>sp|A5D6W6|FITM1_HUMAN Fat storage-inducing transmembrane protein 1 OS=Homo sapiens
GN=FITM1 PE=1 SV=1
Length = 292
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 69 HGNYFNLRLQGELWGWACFFIG 90
HGN+FN++ WGW C F+G
Sbjct: 83 HGNFFNIKFVNSAWGWTCTFLG 104
>sp|A7YWN2|FITM1_BOVIN Fat storage-inducing transmembrane protein 1 OS=Bos taurus GN=FITM1
PE=2 SV=1
Length = 292
Score = 34.7 bits (78), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 69 HGNYFNLRLQGELWGWACFFIG 90
HGN+FN++ WGW C F+G
Sbjct: 83 HGNFFNIKFVNSAWGWTCTFLG 104
>sp|Q6TMJ1|DCD3A_DICDI Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum
GN=dcd3A PE=2 SV=1
Length = 288
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 88 FIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSIIAIFIIERIDEHK 137
+I + VGVGS++YH ++D LPM +T++I ++I+ + E K
Sbjct: 82 YISLIVVGVGSAFYHATLLYQNQLFDELPMI--YTALIMLYIMVTVGEEK 129
>sp|Q55DQ0|DCD3B_DICDI Putative alkaline ceramidase dcd3B OS=Dictyostelium discoideum
GN=dcd3B PE=3 SV=1
Length = 285
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 88 FIGVAAVGVGSSYYHLEPNDARLVWDRLPMTIAFTSII-AIFIIERIDEHKGTVS 141
++ +A VGVGS++YH ++D PM + + + I I+ +DE T +
Sbjct: 81 YLSLAIVGVGSAFYHATLLYKNQLFDEFPMMLTASMFVYCILTIDPVDEKNDTAT 135
>sp|B1YG43|HTPG_EXIS2 Chaperone protein HtpG OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1
Length = 621
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 189 HSTYWLWAAGFY---LLAKVEEAMDKPI-----YRWTHHIVSGHTLKHLCAAMVPVFLTL 240
H + GFY ++A + KP Y+W H V G+T++ + MV +TL
Sbjct: 112 HDIIGQFGVGFYSAFMVADTVTVVTKPFGSDVAYKWESHGVDGYTIEEVEKEMVGTDITL 171
Query: 241 MLAKRTIETERVSLLKTWRIRWTRRKEND 269
+ + L+ +R+R +K +D
Sbjct: 172 HIKANEEDENYDEYLEPYRLRSIIKKYSD 200
>sp|Q89Z16|MNTP_BACTN Putative manganese efflux pump MntP OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=mntP PE=3 SV=1
Length = 193
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 20 MIVTPAIPQSEEYHDFADQRKFFGIPNTLNVVSNFPFLVIGIVGLVLCFHGNYFNL---- 75
++ T AI S + GI N ++S P L+IG V V+ G YF +
Sbjct: 105 VVFTMAIATSIDALAIGISFALLGINNYTEILS--PILIIGFVSFVMSLIGLYFGIKCGC 162
Query: 76 ----RLQGELWG 83
+L+ ELWG
Sbjct: 163 GCARKLKAELWG 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,719,393
Number of Sequences: 539616
Number of extensions: 4272221
Number of successful extensions: 12425
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 12418
Number of HSP's gapped (non-prelim): 12
length of query: 289
length of database: 191,569,459
effective HSP length: 116
effective length of query: 173
effective length of database: 128,974,003
effective search space: 22312502519
effective search space used: 22312502519
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)