Query 022995
Match_columns 289
No_of_seqs 203 out of 1211
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 14:34:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 3.7E-50 1.3E-54 356.9 20.6 205 77-287 11-220 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 8.9E-51 3E-55 359.5 11.8 187 76-287 29-215 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 2.6E-33 9E-38 251.5 9.1 175 81-288 14-199 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 1.4E-23 4.6E-28 189.0 16.0 173 85-286 25-215 (247)
5 3kt7_A PKHD-type hydroxylase T 99.0 1.5E-09 5.1E-14 107.2 10.9 113 152-285 107-229 (633)
6 2rg4_A Uncharacterized protein 98.6 3.8E-07 1.3E-11 79.9 12.0 96 167-282 103-205 (216)
7 2fct_A Syringomycin biosynthes 97.7 0.00044 1.5E-08 62.8 13.2 180 86-280 21-256 (313)
8 2rdq_A 1-deoxypentalenic acid 97.7 8.9E-05 3E-09 66.5 8.4 95 177-285 134-253 (288)
9 2a1x_A Phytanoyl-COA dioxygena 97.6 0.0006 2E-08 61.8 12.6 183 86-284 34-254 (308)
10 3gja_A CYTC3; halogenase, beta 96.9 0.004 1.4E-07 57.1 10.1 174 87-280 24-258 (319)
11 3emr_A ECTD; double stranded b 96.9 0.00097 3.3E-08 61.1 5.3 174 86-282 46-266 (310)
12 2iuw_A Alkylated repair protei 96.7 0.033 1.1E-06 49.0 13.4 170 86-280 40-226 (238)
13 3s57_A Alpha-ketoglutarate-dep 96.5 0.07 2.4E-06 45.8 14.1 178 80-280 4-199 (204)
14 3nnf_A CURA; non-HAEM Fe(II)/a 96.5 0.0044 1.5E-07 56.5 6.5 188 88-287 42-278 (344)
15 3i3q_A Alpha-ketoglutarate-dep 95.9 0.13 4.3E-06 44.5 12.8 108 147-280 85-199 (211)
16 2opw_A Phyhd1 protein; double- 95.9 0.039 1.3E-06 49.2 9.7 92 177-280 150-262 (291)
17 3tht_A Alkylated DNA repair pr 95.7 0.063 2.1E-06 49.9 10.4 146 82-251 107-259 (345)
18 1w9y_A 1-aminocyclopropane-1-c 82.6 5.4 0.00019 36.1 9.0 88 168-284 156-253 (319)
19 1gp6_A Leucoanthocyanidin diox 73.0 18 0.00063 33.0 9.6 87 168-284 211-307 (356)
20 3pl0_A Uncharacterized protein 72.9 3.4 0.00011 36.6 4.3 56 197-272 170-226 (254)
21 1dcs_A Deacetoxycephalosporin 68.9 19 0.00065 32.2 8.6 106 151-284 133-267 (311)
22 1odm_A Isopenicillin N synthas 55.9 40 0.0014 30.3 8.3 105 149-284 154-288 (331)
23 1z65_A PRPLP, prion-like prote 49.7 11 0.00038 21.9 2.2 18 13-30 1-18 (30)
24 3oox_A Putative 2OG-Fe(II) oxy 49.6 38 0.0013 30.2 7.0 104 151-283 145-270 (312)
25 1nx8_A CARC, carbapenem syntha 44.1 19 0.00064 31.2 3.9 41 236-284 230-272 (273)
26 2og5_A Putative oxygenase; non 39.3 20 0.00069 32.6 3.5 41 237-285 291-335 (357)
27 2wbq_A L-arginine beta-hydroxy 38.9 22 0.00076 32.2 3.7 42 236-285 295-340 (358)
28 2pp6_A Gifsy-2 prophage ATP-bi 36.3 23 0.00078 26.8 2.7 25 240-285 62-86 (102)
29 1otj_A Alpha-ketoglutarate-dep 35.5 30 0.001 30.0 3.8 42 236-285 234-276 (283)
30 3dqy_A Toluene 1,2-dioxygenase 35.4 56 0.0019 23.8 4.9 49 204-274 5-53 (106)
31 1ds1_A Clavaminate synthase 1; 30.8 34 0.0012 30.5 3.5 41 236-284 258-302 (324)
32 2dbn_A Hypothetical protein YB 30.4 15 0.00052 35.1 1.1 77 196-282 295-402 (461)
33 1otj_A Alpha-ketoglutarate-dep 30.0 39 0.0013 29.3 3.7 35 180-220 96-130 (283)
34 3pvj_A Alpha-ketoglutarate-dep 29.3 35 0.0012 29.9 3.2 36 178-219 92-127 (277)
35 2opw_A Phyhd1 protein; double- 25.8 39 0.0013 29.2 2.9 23 87-109 16-38 (291)
36 1oih_A Putative alkylsulfatase 25.5 46 0.0016 29.1 3.3 36 177-218 102-137 (301)
37 4aiv_A Probable nitrite reduct 25.2 1.6E+02 0.0055 22.1 6.0 56 198-273 7-62 (119)
38 3a4c_A DNA replication factor 24.6 1.4E+02 0.0049 22.5 5.4 57 91-157 47-103 (106)
39 3o2g_A Gamma-butyrobetaine dio 24.1 48 0.0016 30.5 3.2 41 236-284 327-370 (388)
40 3r1j_A Alpha-ketoglutarate-dep 23.3 52 0.0018 29.2 3.2 36 178-219 98-133 (301)
41 1vm9_A Toluene-4-monooxygenase 23.1 1.2E+02 0.0043 22.0 4.9 51 204-274 5-55 (111)
42 3gce_A Ferredoxin component of 22.4 96 0.0033 23.3 4.2 51 201-273 11-61 (121)
43 2i7f_A Ferredoxin component of 22.2 1.6E+02 0.0053 21.3 5.3 50 202-273 5-55 (108)
44 3on7_A Oxidoreductase, iron/as 21.7 1.7E+02 0.0059 25.4 6.3 88 168-284 151-254 (280)
45 2q4a_A Clavaminate synthase-li 21.3 50 0.0017 29.3 2.7 34 236-278 292-325 (330)
46 3eat_X Pyoverdine biosynthesis 20.0 75 0.0026 27.9 3.5 42 236-285 240-282 (293)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=3.7e-50 Score=356.88 Aligned_cols=205 Identities=42% Similarity=0.758 Sum_probs=177.8
Q ss_pred cccEEeecCCcEEEecCCCCHHHHHHHHHHhhcCCccceeeecC-CceeecccceeecceEEecCCCChhHHHHHHHHHH
Q 022995 77 IPFQVLSWMPRALYFPNFATPEQCKSIINMAKLNLRPSTLALRK-GETVDNTQGIRTSSGVFISAAEDESGTLDLIEEKI 155 (289)
Q Consensus 77 ~p~~~ls~~P~i~~i~nfLs~eEC~~Li~~a~~~l~~s~v~~~~-G~~~~~~~~~RtS~~~~l~~~~~~~~i~~~I~~Ri 155 (289)
..+++||++|+|++|+||||++||++||+++++.+++|++.... |+. ..+.+|+|+.+|+...++ +++++|++||
T Consensus 11 ~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~--~~~~~R~s~~~~l~~~~~--~~~~~i~~ri 86 (224)
T 2jig_A 11 GEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKS--VDSEIRTSTGTWFAKGED--SVISKIEKRV 86 (224)
T ss_dssp CCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEE--EECSSBCSEEEECCTTCS--HHHHHHHHHH
T ss_pred cceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcc--cccCCEEEeeeEecCCCC--HHHHHHHHHH
Confidence 34699999999999999999999999999999999999987643 332 356799999999987543 6899999999
Q ss_pred HHHcCCCCcccccceeeecCCCCccccCcccCCCCCCC--CCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcc
Q 022995 156 AKVTMLPRINGEAFNILRYKIGQKYNSHYDAFDPQEYG--PQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQ 233 (289)
Q Consensus 156 ~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~--~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~ 233 (289)
++++++|...+|++||+||++||+|++|+|++...... ...++|++|+|+||||+++||||+||..... ..++.++
T Consensus 87 ~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~--~~~~~~~ 164 (224)
T 2jig_A 87 AQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQK--VTGDGWS 164 (224)
T ss_dssp HHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSC--CCSTTSC
T ss_pred HHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccc--ccccccc
Confidence 99999999999999999999999999999998653211 2357999999999999999999999976422 2234556
Q ss_pred cc--cceEEecccccEEEEeecCCCCCCCCCCcccccCcccceEEEEEeccccccc
Q 022995 234 KC--IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVATKWIRDQEQ 287 (289)
Q Consensus 234 ~~--~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~~~~ 287 (289)
+| .+++|+|++|+||+|+|+.+||++|.+++|+||||++|+||++++||+.++.
T Consensus 165 ~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~ 220 (224)
T 2jig_A 165 ECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPI 220 (224)
T ss_dssp TTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCC
T ss_pred ccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCc
Confidence 66 4899999999999999999999999999999999999999999999998765
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=8.9e-51 Score=359.55 Aligned_cols=187 Identities=33% Similarity=0.655 Sum_probs=164.4
Q ss_pred ccccEEeecCCcEEEecCCCCHHHHHHHHHHhhcCCccceeeecCCceeecccceeecceEEecCCCChhHHHHHHHHHH
Q 022995 76 NIPFQVLSWMPRALYFPNFATPEQCKSIINMAKLNLRPSTLALRKGETVDNTQGIRTSSGVFISAAEDESGTLDLIEEKI 155 (289)
Q Consensus 76 ~~p~~~ls~~P~i~~i~nfLs~eEC~~Li~~a~~~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~i~~~I~~Ri 155 (289)
.++++++|++|+|++++||||++||++||+++++.+++|++.. + ...+.+|+|+++|++. ++++++|++||
T Consensus 29 ~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~--~---~~~~~~RtS~~~wl~~----~~~v~~i~~Ri 99 (216)
T 3itq_A 29 EIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGS--S---RDVNDIRTSSGAFLDD----NELTAKIEKRI 99 (216)
T ss_dssp EEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC-------------CCCCGGGTTCEECCC----CHHHHHHHHHH
T ss_pred eEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceecc--C---CccCCcEeeeeEEeCC----cHHHHHHHHHH
Confidence 4467899999999999999999999999999999999998832 1 2357899999999986 36999999999
Q ss_pred HHHcCCCCcccccceeeecCCCCccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcccc
Q 022995 156 AKVTMLPRINGEAFNILRYKIGQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKC 235 (289)
Q Consensus 156 ~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~ 235 (289)
++++|+|...+|.+|++||++||+|++|+|++..... ...++|++|+++||||+++||||+||.
T Consensus 100 ~~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~-~~~~~R~~T~l~YLnd~~~GGeT~Fp~--------------- 163 (216)
T 3itq_A 100 SSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSR-SAANNRISTLVMYLNDVEEGGETFFPK--------------- 163 (216)
T ss_dssp HHHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSG-GGGGCEEEEEEEECSCCSEECCEEETT---------------
T ss_pred HHhcCceeccccceeEEEeCCCCccccccCCCcCCCc-ccCCceEEEEEEecccCCcCceeEecC---------------
Confidence 9999999999999999999999999999999865321 124789999999999999999999996
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCcccceEEEEEeccccccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVATKWIRDQEQ 287 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~~~~ 287 (289)
.+++|+|++|+||+|+|+++||++|++++|+||||++|+||++++|+|.+..
T Consensus 164 ~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~ 215 (216)
T 3itq_A 164 LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTY 215 (216)
T ss_dssp TTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCC
T ss_pred CCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCc
Confidence 5899999999999999999999999999999999999999999999998864
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.98 E-value=2.6e-33 Score=251.47 Aligned_cols=175 Identities=15% Similarity=0.164 Sum_probs=137.5
Q ss_pred EeecCCcEEEecCCCCHHHHHHHHHHhhc-CCccceeeecCCceeecccceeecceEEecCCCChhHHHHHHHHHHHHHc
Q 022995 81 VLSWMPRALYFPNFATPEQCKSIINMAKL-NLRPSTLALRKGETVDNTQGIRTSSGVFISAAEDESGTLDLIEEKIAKVT 159 (289)
Q Consensus 81 ~ls~~P~i~~i~nfLs~eEC~~Li~~a~~-~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~i~~~I~~Ri~~~~ 159 (289)
-+-..+.+++|+||||++||++||++++. .+.++.+.. |. ....+|.+ .++... +++++.|.+||.+++
T Consensus 14 ~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t~--g~---~~~~vr~n--~~l~~d---~~~~~~l~~~i~~~l 83 (243)
T 3dkq_A 14 NLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTS--GA---MATTRKRN--QQLDKD---DPVAVALGQQIMDRL 83 (243)
T ss_dssp CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCCS--SB---SSCCCEEE--EECCTT---CHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcccC--CC---ccccceee--eEECCC---CHHHHHHHHHHHHHH
Confidence 34457889999999999999999999975 455554432 21 23456665 455432 268999999999987
Q ss_pred CCC--------CcccccceeeecCCCCccccCcccCCCCCCCCCCCceEEEEEEecCC--CCCCcceeccCCCCCCCCCC
Q 022995 160 MLP--------RINGEAFNILRYKIGQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTD--LEEGGETMFPFENGMNADGS 229 (289)
Q Consensus 160 g~p--------~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNd--v~eGGeT~Fp~~~~~~~~~~ 229 (289)
+.. ....|++|++||++|++|++|+|.+.....+. ..+|.+|+++|||| +++||||+||...
T Consensus 84 ~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~-~~~r~~T~~lYLndp~~~~GGetvf~~~~------- 155 (243)
T 3dkq_A 84 LAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDG-MIRTDLSATLFLSEPENYQGGELVIQDTY------- 155 (243)
T ss_dssp HTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTE-EEECCEEEEEECSCGGGEEECCEEEEETT-------
T ss_pred ccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCCc-cccceEEEEEEeCCCCCCCCceEEEeeCC-------
Confidence 654 13467899999999999999999986421110 23689999999999 6799999999632
Q ss_pred CCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcccceEEEEEecccccccc
Q 022995 230 YDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVATKWIRDQEQY 288 (289)
Q Consensus 230 ~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~~~~~ 288 (289)
...+|+|++|++|+|++ .++|+||||++|+||++++||++..++
T Consensus 156 ------~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi~s~vr~ 199 (243)
T 3dkq_A 156 ------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQSMVRD 199 (243)
T ss_dssp ------EEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEEEEESCCC
T ss_pred ------CcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEehhhccCC
Confidence 36899999999999986 689999999999999999999988765
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.91 E-value=1.4e-23 Score=188.99 Aligned_cols=173 Identities=18% Similarity=0.237 Sum_probs=126.8
Q ss_pred CCcEEEecCCCCHHHHHHHHHHhhc-----CCccceeeecCCceeecccceeecceEEecCCCChhH----HHHHHHHHH
Q 022995 85 MPRALYFPNFATPEQCKSIINMAKL-----NLRPSTLALRKGETVDNTQGIRTSSGVFISAAEDESG----TLDLIEEKI 155 (289)
Q Consensus 85 ~P~i~~i~nfLs~eEC~~Li~~a~~-----~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~----i~~~I~~Ri 155 (289)
.+.+++++|||+++||++|++.++. .++++.+.. +. ....+.+|++..+|++..+...+ ++++|++.+
T Consensus 25 ~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~--~~-~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~ 101 (247)
T 2hbt_A 25 KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVS--QK-SDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLI 101 (247)
T ss_dssp HTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEE--CC-SSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHhhhhcCCcccccccc--cc-ccccccccccceeeecccccchhHHHHHHHHHHHHH
Confidence 3457889999999999999999874 477777654 11 12457899999999987643211 345554444
Q ss_pred HHHcC-CCCc---ccccceeeecCC-CCccccCcccCCCCCCCCCCCceEEEEEEecCCC----CCCcceeccCCCCCCC
Q 022995 156 AKVTM-LPRI---NGEAFNILRYKI-GQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDL----EEGGETMFPFENGMNA 226 (289)
Q Consensus 156 ~~~~g-~p~~---~~E~lqv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv----~eGGeT~Fp~~~~~~~ 226 (289)
..+.+ +... ..+.+|+++|.+ |++|.+|.|... ..+|.+|+++|||+. +.||+|.|.....
T Consensus 102 ~~ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~--- 171 (247)
T 2hbt_A 102 RHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK--- 171 (247)
T ss_dssp HHTTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---
T ss_pred HHHhhhcCcccccccceEEEEEecCCCCcccccccCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC---
Confidence 33322 1111 135689999996 999999999832 357999999999994 4699998653211
Q ss_pred CCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcccceEEEEEecccccc
Q 022995 227 DGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVATKWIRDQE 286 (289)
Q Consensus 227 ~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~~~ 286 (289)
.....|.|+.|++|+|.+ +..++|+++|+ .|.||+++.||+...
T Consensus 172 --------~~~~~v~P~~grlv~F~s-------~~~~~H~V~p~-~~~R~sit~W~~~~~ 215 (247)
T 2hbt_A 172 --------AQFADIEPKFDRLLFFWS-------DRRNPHEVQPA-YATRYAITVWYFDAD 215 (247)
T ss_dssp --------SSCEEECCBTTEEEEEEC-------STTCCEEECCB-SSCEEEEEEEEEEHH
T ss_pred --------CceEEEEcCCCEEEEEec-------CCCceeeeccC-CCEEEEEEEEEcCCc
Confidence 135799999999999987 23489999995 589999999998753
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=98.99 E-value=1.5e-09 Score=107.24 Aligned_cols=113 Identities=20% Similarity=0.172 Sum_probs=84.5
Q ss_pred HHHHHHHcCC-CCc-ccccceeeecCCCCccccCcccCCCCCCCCCCCceEEEEEEecCCC------CCCcceeccCCCC
Q 022995 152 EEKIAKVTML-PRI-NGEAFNILRYKIGQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDL------EEGGETMFPFENG 223 (289)
Q Consensus 152 ~~Ri~~~~g~-p~~-~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv------~eGGeT~Fp~~~~ 223 (289)
.+-|++++|+ +.. ..-.+++.+|..|++|.+|.|.+ +.|.+|+++|||+. +.||++.+.....
T Consensus 107 r~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~ 177 (633)
T 3kt7_A 107 RDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFPSIL 177 (633)
T ss_dssp HHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECCEEE
T ss_pred HHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEecCCC
Confidence 3456778898 442 23458999999999999999963 34999999999983 3699999764321
Q ss_pred CCCCCCCCcccccceEEecccccEEEEeecCCCCCCC-CCCcccccCcc-cceEEEEEeccccc
Q 022995 224 MNADGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTID-PTSIHGSCPVV-KGEKWVATKWIRDQ 285 (289)
Q Consensus 224 ~~~~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D-~~~~H~g~PV~-~G~K~v~~~W~~~~ 285 (289)
.+. -.......|.|..|++|+|.+ . ..++|++.||. ...|+.++.|||..
T Consensus 178 ~~~-----P~~d~~~~I~P~fNrLV~F~v-------sp~~S~H~V~eV~~~~~RlSItGWF~~p 229 (633)
T 3kt7_A 178 PNV-----PHSDPSAKLVPQFNQIAFFKV-------LPGFSFHDXEEVKVDKHRLSIQGWYHIP 229 (633)
T ss_dssp TTE-----ECSSCSEEECCCTTEEEEEEC-------CTTTCCEEECCBCSSCCEEEEEEEEECC
T ss_pred cCC-----CCCCceEEEecCCCeEEEEEc-------CCCCCcCCCCccCCCCCEEEEEEEeccC
Confidence 000 000135789999999999986 2 27999999998 55899999999865
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.60 E-value=3.8e-07 Score=79.94 Aligned_cols=96 Identities=18% Similarity=-0.013 Sum_probs=70.3
Q ss_pred ccceeeecCCCCccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCC---C---CCCCcccccceEE
Q 022995 167 EAFNILRYKIGQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNA---D---GSYDYQKCIGLKV 240 (289)
Q Consensus 167 E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~---~---~~~~~~~~~~~~V 240 (289)
....+.+|.+|++|..|.|. ++.+|.++|||..+.||++.|........ + .........-..|
T Consensus 103 ~~~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i 171 (216)
T 2rg4_A 103 EDIWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSV 171 (216)
T ss_dssp EEEEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEE
T ss_pred eeEEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEe
Confidence 35678899999999999873 47899999999999999999975321110 0 0000110122489
Q ss_pred ecccccEEEEeecCCCCCCCCCCcccccCccc-ceEEEEEecc
Q 022995 241 KPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK-GEKWVATKWI 282 (289)
Q Consensus 241 ~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~-G~K~v~~~W~ 282 (289)
+|+.|++|+|++ ...|++.|... ++|+++..-+
T Consensus 172 ~P~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 172 APKVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp CCCTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEE
T ss_pred cCCCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEe
Confidence 999999999997 69999999875 5788876544
No 7
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.71 E-value=0.00044 Score=62.80 Aligned_cols=180 Identities=14% Similarity=0.144 Sum_probs=92.5
Q ss_pred CcEEEecCCCCHHHHHHHHHHhhcCCcc--ceeeecCCceeecccceeecceEEecCCCChhHHH-----HHHHHHHHHH
Q 022995 86 PRALYFPNFATPEQCKSIINMAKLNLRP--STLALRKGETVDNTQGIRTSSGVFISAAEDESGTL-----DLIEEKIAKV 158 (289)
Q Consensus 86 P~i~~i~nfLs~eEC~~Li~~a~~~l~~--s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~i~-----~~I~~Ri~~~ 158 (289)
...+++++||+++||+.|.+.....+.. ..+... ++.. .....|.....+. .+ ..+. ..|.+.++++
T Consensus 21 dGyvvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~-~~~~-~~~~~~~~~~~~~---~~-~~~~~~~~~p~l~~~~~~l 94 (313)
T 2fct_A 21 NGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD-LDAI-SGGTNIANYDRHL---DD-DFLASHICRPEICDRVESI 94 (313)
T ss_dssp HSEEEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCC-CCC-----CGGGGBCGGG---TC-HHHHHHTTCHHHHHHHHHH
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHHHhccccccccc-cccc-CCccchhcccccc---cc-HHHHHHHcChHHHHHHHHH
Confidence 4567889999999999998766542211 111110 0000 0000111100000 01 1111 2344455667
Q ss_pred cCCCCcccccceeeecCCCCccccCcccCCCCCCC------CCCCc--eEEEEEEecCCCC-CCcceec-cCCCCCCC-C
Q 022995 159 TMLPRINGEAFNILRYKIGQKYNSHYDAFDPQEYG------PQKSQ--RVASFLVYLTDLE-EGGETMF-PFENGMNA-D 227 (289)
Q Consensus 159 ~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~------~~~~~--R~~T~liYLNdv~-eGGeT~F-p~~~~~~~-~ 227 (289)
+|-+.-.....-+.+...++...+|.|...-...+ +.... +.+|+.|+|.|+. +.|.|.| |..-.... +
T Consensus 95 lG~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~ 174 (313)
T 2fct_A 95 LGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYD 174 (313)
T ss_dssp HCSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBC
T ss_pred cCCCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCccc
Confidence 77332111111122332233468999985421110 00111 6899999999984 6677876 43221100 0
Q ss_pred C-----------------C-------CC---------c--ccccceEEecccccEEEEeecCCCCCCCCCCcccccCcc-
Q 022995 228 G-----------------S-------YD---------Y--QKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVV- 271 (289)
Q Consensus 228 ~-----------------~-------~~---------~--~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~- 271 (289)
. + ++ + .....+.+.-++|++|+|.. .++|++.|..
T Consensus 175 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~l~H~s~~N~~ 245 (313)
T 2fct_A 175 ETKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFWS---------TLMHASYPHSG 245 (313)
T ss_dssp TTSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEET---------TSEEEECCBCS
T ss_pred cccccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEeC---------CceeeCCCCCC
Confidence 0 0 00 0 12345788999999999964 8999999998
Q ss_pred -c-ceEEEEEe
Q 022995 272 -K-GEKWVATK 280 (289)
Q Consensus 272 -~-G~K~v~~~ 280 (289)
. ..++++..
T Consensus 246 ss~~~R~a~~~ 256 (313)
T 2fct_A 246 ESQEMRMGFAS 256 (313)
T ss_dssp SSSSCEEEEEE
T ss_pred CCCCceEEEEE
Confidence 4 36776653
No 8
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.71 E-value=8.9e-05 Score=66.49 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=62.5
Q ss_pred CCccccCcccCCCCCCCCCCCceEEEEEEecCCCC-CCcceec-cCCCCCCCCCC-C-----------------C-cccc
Q 022995 177 GQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLE-EGGETMF-PFENGMNADGS-Y-----------------D-YQKC 235 (289)
Q Consensus 177 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~-eGGeT~F-p~~~~~~~~~~-~-----------------~-~~~~ 235 (289)
|....+|.|..... ...+.+|+.|+|.|+. +.|.|.| |..-....... + + ..+.
T Consensus 134 g~~~~wHqD~~~~~-----~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (288)
T 2rdq_A 134 HYLTPFHQDGFYIG-----PNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDE 208 (288)
T ss_dssp TTSCCSBCHHHHSC-----SCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTS
T ss_pred CCCcCccccccccC-----CCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccC
Confidence 44678999986421 2346899999999985 5677776 43221111000 0 0 0111
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCcccc----eEEEEEeccccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG----EKWVATKWIRDQ 285 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G----~K~v~~~W~~~~ 285 (289)
..+.+.-++|++|+|.. .++|++.|.... .+|++..|+...
T Consensus 209 ~~v~~~~~aGdv~lf~~---------~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 209 HLLHSPMEPGDILLFHA---------HMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CEECCCCCTTCEEEEET---------TCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ceeecccCCCCEEEEeC---------CceecCCCCCCCCccceEEEEEEEEecC
Confidence 23567779999999964 899999999875 378988887654
No 9
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.62 E-value=0.0006 Score=61.82 Aligned_cols=183 Identities=16% Similarity=0.091 Sum_probs=92.4
Q ss_pred CcEEEecCCCCHHHHHHHHHHhhcCCcc-----ceeeecC---CceeecccceeecceEEecCCCChhHHH------HHH
Q 022995 86 PRALYFPNFATPEQCKSIINMAKLNLRP-----STLALRK---GETVDNTQGIRTSSGVFISAAEDESGTL------DLI 151 (289)
Q Consensus 86 P~i~~i~nfLs~eEC~~Li~~a~~~l~~-----s~v~~~~---G~~~~~~~~~RtS~~~~l~~~~~~~~i~------~~I 151 (289)
-..+++++||+++||++|.+..+..+.. ......+ ++.... ...+.-.... .-..+ +.+ ..|
T Consensus 34 dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~--~~~~~l~~~p~l 109 (308)
T 2a1x_A 34 NGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYA-PSEKMITKVQ-DFQED--KELFRYCTLPEI 109 (308)
T ss_dssp HSEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE------EECCEEE-CCTTS--HHHHHHHHCHHH
T ss_pred CCEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccC-chHHHHhhhh-hhhhC--HHHHHHHhCHHH
Confidence 3467889999999999999887652211 1000000 000000 0001000110 00111 222 224
Q ss_pred HHHHHHHcCCCCcccccceeeecC-CCCc---cccCcccCCCCCCCCCCCceEEEEEEecCCCC-CCcceeccC-CCCCC
Q 022995 152 EEKIAKVTMLPRINGEAFNILRYK-IGQK---YNSHYDAFDPQEYGPQKSQRVASFLVYLTDLE-EGGETMFPF-ENGMN 225 (289)
Q Consensus 152 ~~Ri~~~~g~p~~~~E~lqv~rY~-~G~~---y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~-eGGeT~Fp~-~~~~~ 225 (289)
.+.+++++|-+.-.....-+.+.. .|+. ..+|.|...-. .....+.+|+.++|.|+. +.|.|.|-. .....
T Consensus 110 ~~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~---~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~ 186 (308)
T 2a1x_A 110 LKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFP---FRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS 186 (308)
T ss_dssp HHHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCC---EECGGGEEEEEEESSCBCTTBTCEEECTTGGGSC
T ss_pred HHHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCcccc---CCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCc
Confidence 445556677432211111222332 2332 47999985321 011247899999999984 667787632 21100
Q ss_pred CC-----CC-----------CCcc-cccceEEecccccEEEEeecCCCCCCCCCCcccccCccc-ceEEEEEecccc
Q 022995 226 AD-----GS-----------YDYQ-KCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK-GEKWVATKWIRD 284 (289)
Q Consensus 226 ~~-----~~-----------~~~~-~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~-G~K~v~~~W~~~ 284 (289)
.. .| .++. +...+.+.-++|++|+|. ..++|++.|... ..++++..-+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 187 LKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISCHFAS 254 (308)
T ss_dssp CCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEEEEEE
T ss_pred cccccccccccCccccccCCccccccCCeEEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEEEEEC
Confidence 00 00 0111 134578888999999995 489999999875 467777665443
No 10
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=96.94 E-value=0.004 Score=57.09 Aligned_cols=174 Identities=14% Similarity=0.158 Sum_probs=88.3
Q ss_pred cEEEecCCCCHHHHHHHHHHhhcCCcc--ceeeecCCceeecccceeecceEEecCCCChhHHH------HHHHHHHHHH
Q 022995 87 RALYFPNFATPEQCKSIINMAKLNLRP--STLALRKGETVDNTQGIRTSSGVFISAAEDESGTL------DLIEEKIAKV 158 (289)
Q Consensus 87 ~i~~i~nfLs~eEC~~Li~~a~~~l~~--s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~i~------~~I~~Ri~~~ 158 (289)
..++++++|+++||+.|.+..+..+.. ..+.. ++. ...+|.....+. .+ +.+ ..|.+.++++
T Consensus 24 Gyv~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~--~~~---g~~~~~~~~~~~---~~--~~f~~l~~~p~l~~~~~~l 93 (319)
T 3gja_A 24 GYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYP--DSN---GKANISNYDRHL---DI--DLLAEHIMRPEIVDRVGSL 93 (319)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHHHHCCTTCSSC--SCS---SHHHHTTTTGGG---TC--HHHHHHHHCHHHHHHHHHH
T ss_pred CEEECcCCCCHHHHHHHHHHHHHHhhcCcccccc--CCC---ccchhhhhhhcc---cC--HHHHHHHcChHHHHHHHHH
Confidence 356789999999999998887653321 11111 100 011121111110 01 222 2333445566
Q ss_pred cCCCCc-ccccceeeecCCCCccccCcccCCCCCCC------CCCC-----ceEEEEEEecCCCC-CCcceec-cCCCCC
Q 022995 159 TMLPRI-NGEAFNILRYKIGQKYNSHYDAFDPQEYG------PQKS-----QRVASFLVYLTDLE-EGGETMF-PFENGM 224 (289)
Q Consensus 159 ~g~p~~-~~E~lqv~rY~~G~~y~~H~D~~~~~~~~------~~~~-----~R~~T~liYLNdv~-eGGeT~F-p~~~~~ 224 (289)
+|-+.- ....+ +.++.-++...+|.|.......+ +... .+.+|+.++|.|+. +-|.|.| |..-..
T Consensus 94 lG~~~~~~~s~~-~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~~ 172 (319)
T 3gja_A 94 IGRNLLCWRSEF-FPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTS 172 (319)
T ss_dssp HCSSEEEEEEEE-EEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC---
T ss_pred cCCceEEeeeeE-eecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCccC
Confidence 674321 11111 23333223378999975321111 1111 13599999999984 5577776 322111
Q ss_pred CC-CC---------------------C---CC-----------cccccceEEecccccEEEEeecCCCCCCCCCCccccc
Q 022995 225 NA-DG---------------------S---YD-----------YQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSC 268 (289)
Q Consensus 225 ~~-~~---------------------~---~~-----------~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~ 268 (289)
.. +. . .+ ..++..+.+.-++|++|+|.. .++|++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~~~H~s~ 243 (319)
T 3gja_A 173 MNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWS---------NTMHASL 243 (319)
T ss_dssp CEECCC------------------------------------------CCBCCBCTTEEEEEET---------TSCEEEC
T ss_pred cccCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEcC---------CccccCC
Confidence 00 00 0 00 012344667778999999975 8999999
Q ss_pred Ccc--cc-eEEEEEe
Q 022995 269 PVV--KG-EKWVATK 280 (289)
Q Consensus 269 PV~--~G-~K~v~~~ 280 (289)
|-. +. .++++..
T Consensus 244 ~N~~ts~~~R~a~~~ 258 (319)
T 3gja_A 244 PHTGSKTDYRMGFAA 258 (319)
T ss_dssp CCCSCTTCCEEEEEE
T ss_pred CCCCCCCCcEEEEEE
Confidence 998 54 5666543
No 11
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=96.88 E-value=0.00097 Score=61.06 Aligned_cols=174 Identities=16% Similarity=0.079 Sum_probs=90.3
Q ss_pred CcEEEecCCCCHHHHHHHHHHhhcCCcc-------ceeeecCCceeecccceeecceEEecCCCChhHHH------HHHH
Q 022995 86 PRALYFPNFATPEQCKSIINMAKLNLRP-------STLALRKGETVDNTQGIRTSSGVFISAAEDESGTL------DLIE 152 (289)
Q Consensus 86 P~i~~i~nfLs~eEC~~Li~~a~~~l~~-------s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~i~------~~I~ 152 (289)
-..++++|||+++||+.|.+..+..+.. ..+....| ..+|.-...+. .++.+ .+|.
T Consensus 46 dGyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~------~~~r~~~~~~~-----~~~~f~~l~~~p~l~ 114 (310)
T 3emr_A 46 NGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES------NDIRSIFHVHQ-----DDNYFQDVANDKRIL 114 (310)
T ss_dssp HSEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT------CCEEEEECHHH-----HCHHHHHHHTCHHHH
T ss_pred CCEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC------cceeEEeehhh-----ccHHHHHHHhChHHH
Confidence 4467789999999999999887652211 11111011 12221111110 01222 2233
Q ss_pred HHHHHHcCCCCcccccceeeecC---CCCccccCcccCCCC-CCCCCCCceEEEEEEecCCCC-CCcceeccCCCCCC-C
Q 022995 153 EKIAKVTMLPRINGEAFNILRYK---IGQKYNSHYDAFDPQ-EYGPQKSQRVASFLVYLTDLE-EGGETMFPFENGMN-A 226 (289)
Q Consensus 153 ~Ri~~~~g~p~~~~E~lqv~rY~---~G~~y~~H~D~~~~~-~~~~~~~~R~~T~liYLNdv~-eGGeT~Fp~~~~~~-~ 226 (289)
+.+++++|-+....-. .+.+. .|....+|.|...-. +.+ ....+.+|+.|+|.|+. +.|.|.|-...-.. .
T Consensus 115 ~i~~~llG~~~~l~~s--~~~~k~p~~g~~~~wHqD~~~~~~~~g-~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~ 191 (310)
T 3emr_A 115 DIVRHLLGSDVYVHQS--RINYKPGFKGKEFDWHSDFETWHVEDG-MPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFV 191 (310)
T ss_dssp HHHHHHHTSCEEEEEE--EEECCCTTCCCCEEEECHHHHHHHHHC-CCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEE
T ss_pred HHHHHHcCCceEEEee--EEEEcCCCCCCCCCcCCCCccccccCC-CcccceEEEEEEecCCCCcCCCEEEEeCCCCCcc
Confidence 4445566643211110 12233 256788999974210 001 11257999999999984 56777763211100 0
Q ss_pred --------CC--------CCCcc----------ccc-ceEEecccccEEEEeecCCCCCCCCCCcccccCcccc-eEEEE
Q 022995 227 --------DG--------SYDYQ----------KCI-GLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG-EKWVA 278 (289)
Q Consensus 227 --------~~--------~~~~~----------~~~-~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G-~K~v~ 278 (289)
+. .+... ++. -+.+.-++|++|+|.. .++|++.|-... .++++
T Consensus 192 ~~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~---------~~~H~s~~N~S~~~R~~l 262 (310)
T 3emr_A 192 SCVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFES---------NTMHGSTSNITPYPRNNL 262 (310)
T ss_dssp ECCC-----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEET---------TCCEEECCCCSSCCCCEE
T ss_pred cccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeC---------CceecCCCCCCCCCeEEE
Confidence 00 00000 111 4666778999999964 899999998764 46555
Q ss_pred Eecc
Q 022995 279 TKWI 282 (289)
Q Consensus 279 ~~W~ 282 (289)
..=+
T Consensus 263 ~~~y 266 (310)
T 3emr_A 263 FMVY 266 (310)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=96.66 E-value=0.033 Score=49.02 Aligned_cols=170 Identities=15% Similarity=0.118 Sum_probs=96.2
Q ss_pred CcEEEecCCCCHHHHHHHHHHhhc--CCccceeeecCCceeecccceeecceEEecC------------CCChhHHHHHH
Q 022995 86 PRALYFPNFATPEQCKSIINMAKL--NLRPSTLALRKGETVDNTQGIRTSSGVFISA------------AEDESGTLDLI 151 (289)
Q Consensus 86 P~i~~i~nfLs~eEC~~Li~~a~~--~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~------------~~~~~~i~~~I 151 (289)
|.+.+++|||+++|.+.|++.... .+....... -|... ..-|. .+|+.. .....+.+..|
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~-~g~~~---~~~R~--~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l 113 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR-EDITY---QQPRL--TAWYGELPYTYSRITMEPNPHWHPVLRTL 113 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES-SSCEE---ECSSE--EEEEECCCTTSCHHHHCCBSSCCHHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceec-CCccc---ccCCe--eEEcCCCccccCCcccCCCCCCCHHHHHH
Confidence 358999999999999999988742 343332211 12211 11121 123321 00112567778
Q ss_pred HHHHHHHcCCCCcccccceeeecCCCC-ccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCC
Q 022995 152 EEKIAKVTMLPRINGEAFNILRYKIGQ-KYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSY 230 (289)
Q Consensus 152 ~~Ri~~~~g~p~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~ 230 (289)
.++++++++.+. +..-|..|..|+ .-.+|.|.... + .....++|+-+ |+...|-.......+..-
T Consensus 114 ~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~--~--~~~~~IaslSL-------G~~~~f~f~~~~~~~~~~ 179 (238)
T 2iuw_A 114 KNRIEENTGHTF---NSLLCNLYRNEKDSVDWHSDDEPS--L--GRCPIIASLSF-------GATRTFEMRKKPPPEENG 179 (238)
T ss_dssp HHHHHHHHSCCC---CEEEEEEECSTTCCEEEECCCCGG--G--CSSCCEEEEEE-------ESCEEEEEEECCC-----
T ss_pred HHHHHHHhCCCC---CEEEEEEECCCCCceeCCcCChhh--c--CCCCcEEEEEC-------CCCEEEEEeccCCccccC
Confidence 888888776532 456789999997 99999997432 1 12345666664 444454321100000000
Q ss_pred CcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcc--cceEEEEEe
Q 022995 231 DYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVV--KGEKWVATK 280 (289)
Q Consensus 231 ~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~--~G~K~v~~~ 280 (289)
+......++|.-..|++|++.- .......|+..+.. .+.+..+|.
T Consensus 180 ~~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLTf 226 (238)
T 2iuw_A 180 DYTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLTF 226 (238)
T ss_dssp ---CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEEE
T ss_pred cccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEEe
Confidence 0000135789999999999963 22223469888763 567777763
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=96.50 E-value=0.07 Score=45.80 Aligned_cols=178 Identities=14% Similarity=0.060 Sum_probs=99.7
Q ss_pred EEeecCCcEEEecCCCCHHHHHHHHHHhhc--CC---ccceeeecCCceee----------cccceeecceEEecCCCCh
Q 022995 80 QVLSWMPRALYFPNFATPEQCKSIINMAKL--NL---RPSTLALRKGETVD----------NTQGIRTSSGVFISAAEDE 144 (289)
Q Consensus 80 ~~ls~~P~i~~i~nfLs~eEC~~Li~~a~~--~l---~~s~v~~~~G~~~~----------~~~~~RtS~~~~l~~~~~~ 144 (289)
+.+-.+-..+++++||+++|+++|.+.... .+ +...+.. -|+... ....++-|....... ..
T Consensus 4 ~~~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~-~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~--pw 80 (204)
T 3s57_A 4 RHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV-FGKWHSVPRKQATYGDAGLTYTFSGLTLSPK--PW 80 (204)
T ss_dssp EEEEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE-TTEEEECSSEEEEEECTTCCEEETTEEECCE--EC
T ss_pred ceeeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE-CCeEeccCcEEEEECCCCCCcccCCCcccCC--CC
Confidence 445556667899999999999999887643 34 2222221 122110 001233333222111 11
Q ss_pred hHHHHHHHHHHHHHcCCCCcccccceeeecCCCC-ccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCC
Q 022995 145 SGTLDLIEEKIAKVTMLPRINGEAFNILRYKIGQ-KYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENG 223 (289)
Q Consensus 145 ~~i~~~I~~Ri~~~~g~p~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~ 223 (289)
.+.+..|.+++++.++.+. ...-+..|..|+ .-.+|.|....- ..+.-++|+-+ |+...|-....
T Consensus 81 p~~L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IasvSL-------G~~~~f~~~~~ 146 (204)
T 3s57_A 81 IPVLERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDEREL----APGSPIASVSF-------GASRDFVFRHK 146 (204)
T ss_dssp CHHHHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTTB----CTTCCEEEEEE-------ESCEEEEEEEG
T ss_pred CHHHHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhhc----cCCCcEEEEEC-------CCceEEEEEEc
Confidence 3688889999988877543 346788999999 899999974321 12344555553 44444432110
Q ss_pred CCCCCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCccc--ceEEEEEe
Q 022995 224 MNADGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK--GEKWVATK 280 (289)
Q Consensus 224 ~~~~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~--G~K~v~~~ 280 (289)
...+.. .......+++.-..|+++++.. .......|+..+... |.++.+|-
T Consensus 147 ~~~~~~-~~~~~~~~~~~L~~GsllvM~g-----~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 147 DSRGKS-PSRRVAVVRLPLAHGSLLMMNH-----PTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp GGCSSS-CSCCCCCEEEEECTTEEEEEET-----THHHHEEEEECCCTTCCSCEEEEEE
T ss_pred CCCccc-cccCCceEEEECCCCCEEEECc-----hhhheeEeeccccCCCCCCEEEEEe
Confidence 000000 0001135789999999999962 222234577766542 67777763
No 14
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=96.47 E-value=0.0044 Score=56.52 Aligned_cols=188 Identities=13% Similarity=0.057 Sum_probs=97.0
Q ss_pred EEEecCCCCHHHHHHHHHHhhcCCccceeeecCCc-eeecccceeecceEEecCCCCh-hHHHHHHHHHHHHHcCCCCcc
Q 022995 88 ALYFPNFATPEQCKSIINMAKLNLRPSTLALRKGE-TVDNTQGIRTSSGVFISAAEDE-SGTLDLIEEKIAKVTMLPRIN 165 (289)
Q Consensus 88 i~~i~nfLs~eEC~~Li~~a~~~l~~s~v~~~~G~-~~~~~~~~RtS~~~~l~~~~~~-~~i~~~I~~Ri~~~~g~p~~~ 165 (289)
-++++|++|++|.+.|++..+.....+.+...... .......+|+..-.+-.-..+. +.+..++-.-+..++|-..-.
T Consensus 42 YLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h~~s~l~~rll~vl~~LlG~el~i 121 (344)
T 3nnf_A 42 YCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMI 121 (344)
T ss_dssp EEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHHHHHHHHGGGHHHHHHHHTSCEEE
T ss_pred eEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHHHHHHHHHHHHHHHHHHhCCceee
Confidence 46789999999999999988753223322210000 0001234553311111100000 123333333344455544321
Q ss_pred cccceeeecCCCCc-cccCcccCCCCCCCCCCCceEEEEEEecCCCC--CCcceec-cCCCCCCC---------------
Q 022995 166 GEAFNILRYKIGQK-YNSHYDAFDPQEYGPQKSQRVASFLVYLTDLE--EGGETMF-PFENGMNA--------------- 226 (289)
Q Consensus 166 ~E~lqv~rY~~G~~-y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~--eGGeT~F-p~~~~~~~--------------- 226 (289)
-.-+...+.+|++ |-||.|..+-.. .....|-+|+=|=|.+.. ++|...+ |...-...
T Consensus 122 -~qs~~fe~kPG~KGFpWH~D~~~F~~--~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~~~~~Lk 198 (344)
T 3nnf_A 122 -MHNALFSVEPNHKGLPWHVGVGSFSF--TKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHLKNNIK 198 (344)
T ss_dssp -EEEEEEEECBTCCBSCSBCTTTTTTT--BCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHHHHHHTT
T ss_pred -eecceEeeCCCCCCCCceeccccccc--ccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHHHHHHhh
Confidence 1235566778764 999999432111 122458889999998865 4666655 53211110
Q ss_pred --CCCCCc----ccccceEEec------------------ccccEEEEeecCCCCCCCCCCcccccCcccc---eE-EEE
Q 022995 227 --DGSYDY----QKCIGLKVKP------------------RQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG---EK-WVA 278 (289)
Q Consensus 227 --~~~~~~----~~~~~~~V~P------------------~~G~allF~n~~~~g~~D~~~~H~g~PV~~G---~K-~v~ 278 (289)
...+.. .+..++--.| ++|+||+|. -.++|++.|+..+ .+ -..
T Consensus 199 ~qe~~~sLee~la~~~gi~~~~~~~~i~~~le~~~~ewd~epGDav~F~---------~~tlHga~plgn~~~~rRRAfS 269 (344)
T 3nnf_A 199 WDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFN---------KYVLHQSVPLKPGLHKLRRAFV 269 (344)
T ss_dssp CCGGGCCHHHHHHHCCCHHHHCCHHHHHHHHTTCEEECCBCTTCEEEEE---------TTCEEEECCBCTTSCSCEEEEE
T ss_pred ccCCcccHHHHHHhhcCcccCccccccchhhhhhhccccCCCCcEEEEe---------cceeecCCCCCCCCccceeEEE
Confidence 000100 0111222222 789999995 4899999988774 23 355
Q ss_pred Eeccccccc
Q 022995 279 TKWIRDQEQ 287 (289)
Q Consensus 279 ~~W~~~~~~ 287 (289)
..|+-+..-
T Consensus 270 ~RfvGDDar 278 (344)
T 3nnf_A 270 IRLVDYDTR 278 (344)
T ss_dssp EEEEETTCB
T ss_pred EEEecCcce
Confidence 677765543
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=95.94 E-value=0.13 Score=44.54 Aligned_cols=108 Identities=20% Similarity=0.247 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHcCCCCcccccceeeecCCCCccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCC
Q 022995 147 TLDLIEEKIAKVTMLPRINGEAFNILRYKIGQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNA 226 (289)
Q Consensus 147 i~~~I~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~ 226 (289)
.+..|.++++...+++....+..-+..|.+|+.-.+|.|.... . .+..++|+-+ |++..|-......
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~-~----~~~pI~svSL-------G~~~~f~f~~~~~- 151 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEP-D----LRAPIVSVSL-------GLPAIFQFGGLKR- 151 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCS-C----TTSCEEEEEE-------ESCEEEEECCSST-
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCcc-c----cCCCEEEEEC-------CCCeEEEEecccC-
Confidence 5777888888877764333356788999999999999996221 1 1244777664 6666665432110
Q ss_pred CCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCccc-------ceEEEEEe
Q 022995 227 DGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK-------GEKWVATK 280 (289)
Q Consensus 227 ~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~-------G~K~v~~~ 280 (289)
.....+|.-..|+++++. |... ...|+..++.+ +.++.+|-
T Consensus 152 -------~~~~~~i~L~~GsllvM~-----G~~r-~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 152 -------NDPLKRLLLEHGDVVVWG-----GESR-LFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp -------TSCCEEEEECTTCEEEEC-----GGGT-TCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred -------CCceEEEECCCCCEEEEC-----chHH-ceEeccCcccCCcCCCCCCCEEEEEe
Confidence 013578999999999995 2222 25799988876 34777764
No 16
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=95.88 E-value=0.039 Score=49.17 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=58.9
Q ss_pred CCccccCcccCCCCCCCCCCCceEEEEEEecCCCC-CCcceec-cCCCCCCCCC----------C---C-----Cccccc
Q 022995 177 GQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLE-EGGETMF-PFENGMNADG----------S---Y-----DYQKCI 236 (289)
Q Consensus 177 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~-eGGeT~F-p~~~~~~~~~----------~---~-----~~~~~~ 236 (289)
|+...+|.|..... .....+.+|+.|+|.|+. ++|.|.| |..-...... . + .+....
T Consensus 150 ~~~~~wHqD~~~~~---~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 2opw_A 150 GGEVSPHQDASFLY---TEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSL 226 (291)
T ss_dssp BCCEEEECGGGTSC---EESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGG
T ss_pred CCCcCCeeCCcccc---cCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCC
Confidence 45589999985421 111237999999999985 6677876 4321111000 0 0 112234
Q ss_pred ceEEecccccEEEEeecCCCCCCCCCCcccccCcccc-eEEEEEe
Q 022995 237 GLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG-EKWVATK 280 (289)
Q Consensus 237 ~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G-~K~v~~~ 280 (289)
.+.+.-++|++|+|.. .++|++.|.... .+++++.
T Consensus 227 ~v~~~~~aGd~~~f~~---------~~~H~s~~N~s~~~R~~~~~ 262 (291)
T 2opw_A 227 FVPTPVQRGALVLIHG---------EVVHKSKQNLSDRSRQAYTF 262 (291)
T ss_dssp CEEECBCTTCEEEEET---------TCEEEECCBCSSSCCCEEEE
T ss_pred eeecccCCCcEEEEcC---------CceecCCCCCCCCceEEEEE
Confidence 6788999999999964 899999998864 4555543
No 17
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=95.68 E-value=0.063 Score=49.91 Aligned_cols=146 Identities=13% Similarity=0.121 Sum_probs=74.3
Q ss_pred eecCCcEEEecCCCCHHHHHHHHHHhhcCCccceeeec---CCc-eeecccceeecceEEecCC---CChhHHHHHHHHH
Q 022995 82 LSWMPRALYFPNFATPEQCKSIINMAKLNLRPSTLALR---KGE-TVDNTQGIRTSSGVFISAA---EDESGTLDLIEEK 154 (289)
Q Consensus 82 ls~~P~i~~i~nfLs~eEC~~Li~~a~~~l~~s~v~~~---~G~-~~~~~~~~RtS~~~~l~~~---~~~~~i~~~I~~R 154 (289)
.+.-|.+.+++||||++|.+.|++...-.-.+..+... .+. .+.....+|-+........ ....+.+..|.+|
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~l~~r 186 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEK 186 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEECCC------------------CCCHHHHHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHHHHHHHH
Confidence 45567899999999999999988766421111111100 000 0000011221111111000 0011356777777
Q ss_pred HHHHcCCCCcccccceeeecCCCCccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCccc
Q 022995 155 IAKVTMLPRINGEAFNILRYKIGQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQK 234 (289)
Q Consensus 155 i~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~ 234 (289)
+.+. ++........-|..|.+|+.-.+|.|.... .+..++|+-+ |+..+|-.....
T Consensus 187 ~~~~-~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~------~~~~I~slSL-------G~~~~f~f~~~~---------- 242 (345)
T 3tht_A 187 WLRK-GYIKHKPDQMTINQYEPGQGIPAHIDTHSA------FEDEIVSLSL-------GSEIVMDFKHPD---------- 242 (345)
T ss_dssp HHHH-TSCSSCCSEEEEEEECTTCCEEEECCCTTT------BCSCEEEEEE-------SSCEEEEEECTT----------
T ss_pred HHhc-ccCCCCCCEEEEEEecCCCCEeeccCCchh------cCCeEEEEEC-------CCceeEEEccCC----------
Confidence 7642 322223345778899999999999998532 1245666543 555555432110
Q ss_pred ccceEEecccccEEEEe
Q 022995 235 CIGLKVKPRQGDGLLFY 251 (289)
Q Consensus 235 ~~~~~V~P~~G~allF~ 251 (289)
...++|.-..|+++++.
T Consensus 243 ~~~~~l~L~~gsLlvM~ 259 (345)
T 3tht_A 243 GIAVPVMLPRRSLLVMT 259 (345)
T ss_dssp SCEEEEEECTTEEEEEC
T ss_pred CceEEEEcCCCcEEEEC
Confidence 02467788889988885
No 18
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=82.55 E-value=5.4 Score=36.09 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=57.1
Q ss_pred cceeeecCCCC------ccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEe
Q 022995 168 AFNILRYKIGQ------KYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVK 241 (289)
Q Consensus 168 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~ 241 (289)
.+++.+|.+.. ...+|.|.. .+|+|+ .|...||==+... ...+.|+
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~~v~GLQV~~~--------------g~Wi~V~ 207 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG------------GIILLF--QDDKVSGLQLLKD--------------GQWIDVP 207 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS------------SEEEEE--ESSSCCCEEEEET--------------TEEEECC
T ss_pred eeEEEecCCCcccccccccccccCCC------------ceEEEE--ecCCCCeeeEeeC--------------CeEEEcc
Confidence 47899997532 366787763 578885 4444466444431 1578999
Q ss_pred cccccEEEEee----cCCCCCCCCCCcccccCcccceEEEEEecccc
Q 022995 242 PRQGDGLLFYS----LLPNGTIDPTSIHGSCPVVKGEKWVATKWIRD 284 (289)
Q Consensus 242 P~~G~allF~n----~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~ 284 (289)
|.+|..||--- .+.||. -..+.|++.....+.++++.-+++-
T Consensus 208 p~pgalvVNiGD~l~~~SnG~-~kS~~HRVv~~~~~~R~Sia~F~~p 253 (319)
T 1w9y_A 208 PMRHSIVVNLGDQLEVITNGK-YKSVMHRVIAQKDGARMSLASFYNP 253 (319)
T ss_dssp CCTTCEEEEECHHHHHHTTTS-SCCCCEEECCCSSSCCEEEEEEEEC
T ss_pred cCCCcEEEEhHHHHHHHhCCe-eecccceecCCCCCCceEEEEEecC
Confidence 99998877431 123343 3688999987666789988776643
No 19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=72.98 E-value=18 Score=33.03 Aligned_cols=87 Identities=14% Similarity=0.115 Sum_probs=56.2
Q ss_pred cceeeecCCC------CccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEe
Q 022995 168 AFNILRYKIG------QKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVK 241 (289)
Q Consensus 168 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~ 241 (289)
.+++.+|.+. -...+|.|.. .+|+|+. |. .||==++.. ...+.|+
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~~--------------g~Wi~V~ 261 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS------------ALTFILH--NM-VPGLQLFYE--------------GKWVTAK 261 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS------------SEEEEEE--CS-CCCEEEEET--------------TEEEECC
T ss_pred eeeeeecCCCCCcccccCcCCccCCC------------eEEEEEE--cC-CCCeEEecC--------------CcEEECc
Confidence 4788999753 1356787763 4788855 32 455444421 1578999
Q ss_pred cccccEEEEee----cCCCCCCCCCCcccccCcccceEEEEEecccc
Q 022995 242 PRQGDGLLFYS----LLPNGTIDPTSIHGSCPVVKGEKWVATKWIRD 284 (289)
Q Consensus 242 P~~G~allF~n----~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~ 284 (289)
|.+|..||--- .+.||. -..+.|++.......++++.-+++-
T Consensus 262 p~pgalvVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~R~Sia~F~~P 307 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNGK-YKSILHRGLVNKEKVRISWAVFCEP 307 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTTS-SCCCCEEECCCSSCCEEEEEEEEEC
T ss_pred CCCCeEEEEeccHHHHhcCCE-eeccCceecCCCCCCEEEEEEeecC
Confidence 99998887531 123343 3688999976555689998877653
No 20
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=72.86 E-value=3.4 Score=36.56 Aligned_cols=56 Identities=27% Similarity=0.296 Sum_probs=38.3
Q ss_pred CceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEec-ccccEEEEeecCCCCCCCCCCcccccCccc
Q 022995 197 SQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVKP-RQGDGLLFYSLLPNGTIDPTSIHGSCPVVK 272 (289)
Q Consensus 197 ~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~P-~~G~allF~n~~~~g~~D~~~~H~g~PV~~ 272 (289)
..-+++++|--+++ +||+|........ ....++- ..|+++++. |...+|.+.||..
T Consensus 170 ~d~v~v~lv~R~Ni-~GGet~I~~~~~~-----------~~~~~~l~~p~d~llv~--------D~~~~H~vTpI~~ 226 (254)
T 3pl0_A 170 VDFVAVVFIGRQGV-RGGETRVFDAAGP-----------QGVRFTLEQPWTVLLLD--------DQQVIHESTPLLP 226 (254)
T ss_dssp SSEEEEEEEEEESE-EECCEEEEETTSS-----------EEEEECCCSTTCEEEEE--------TTTEEEEECCEEE
T ss_pred CCEEEEEEecCCcc-ccceEEEEcCCCC-----------ccceeEecCCCcEEEEe--------CCcccCCCCcccc
Confidence 34577777777766 4899887643211 3344443 678888885 6789999999974
No 21
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=68.88 E-value=19 Score=32.22 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=62.9
Q ss_pred HHHHHHHHcCC----CCcc----cccceeeecCCC---------C-ccccCcccCCCCCCCCCCCceEEEEEEecCCCCC
Q 022995 151 IEEKIAKVTML----PRIN----GEAFNILRYKIG---------Q-KYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEE 212 (289)
Q Consensus 151 I~~Ri~~~~g~----p~~~----~E~lqv~rY~~G---------~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~e 212 (289)
|-+-++..+|+ +.+. ...+++++|.+. + .-.+|.|.. .+|+|+. |...
T Consensus 133 ll~~la~~Lgl~~~~~~~~f~~~~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~v 198 (311)
T 1dcs_A 133 VAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS------------MVTLIQQ--TPCA 198 (311)
T ss_dssp HHHHHHHHTTCCCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECS------------SEEEEEE--ECCT
T ss_pred HHHHHHHHcCCCCcCcHhHHhhcchhhheecCCCCCcccccCccccccccccCCC------------eEEEEec--CCCC
Confidence 33344445677 5321 345789999752 1 267888863 5788865 4234
Q ss_pred Cc--ceeccCCCCCCCCCCCCcccccceEEecccccEEEEe----ecCCCCCCCCCCcccccCcc-----cceEEEEEec
Q 022995 213 GG--ETMFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFY----SLLPNGTIDPTSIHGSCPVV-----KGEKWVATKW 281 (289)
Q Consensus 213 GG--eT~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~----n~~~~g~~D~~~~H~g~PV~-----~G~K~v~~~W 281 (289)
|| .+..-. .+ ..+.|+|.+|..||-- ..+.||. -..+.|++.... ...++++.-+
T Consensus 199 ~G~~~LqV~~-~g------------~W~~V~p~pg~lvVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~~~~~~R~Si~~F 264 (311)
T 1dcs_A 199 NGFVSLQAEV-GG------------AFTDLPYRPDAVLVFCGAIATLVTGGQ-VKAPRHHVAAPRRDQIAGSSRTSSVFF 264 (311)
T ss_dssp TCCCCEEEEE-TT------------EEEECCCCTTCEEEEECHHHHHHTTSC-SCCCCEEECCC----CTTCCEEEEEEE
T ss_pred CCceeEEEEe-CC------------EEEeCcCCCCeEEEEHHHHHHHHhCCc-ccCCCceEeCCCcccCCCCCeEEEEEE
Confidence 55 243322 11 5789999999888742 1123443 358899997654 4578988877
Q ss_pred ccc
Q 022995 282 IRD 284 (289)
Q Consensus 282 ~~~ 284 (289)
++-
T Consensus 265 ~~p 267 (311)
T 1dcs_A 265 LRP 267 (311)
T ss_dssp ECC
T ss_pred EcC
Confidence 653
No 22
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=55.91 E-value=40 Score=30.31 Aligned_cols=105 Identities=12% Similarity=0.002 Sum_probs=61.3
Q ss_pred HHHHHHHHHHcCCCCcc--------cccce--eeecC------C----------CCccccCcccCCCCCCCCCCCceEEE
Q 022995 149 DLIEEKIAKVTMLPRIN--------GEAFN--ILRYK------I----------GQKYNSHYDAFDPQEYGPQKSQRVAS 202 (289)
Q Consensus 149 ~~I~~Ri~~~~g~p~~~--------~E~lq--v~rY~------~----------G~~y~~H~D~~~~~~~~~~~~~R~~T 202 (289)
..|-+-|+..+|++.+. ...++ +++|. + .-...+|.|.. .+|
T Consensus 154 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g------------~lT 221 (331)
T 1odm_A 154 SALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS------------LIT 221 (331)
T ss_dssp HHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS------------SEE
T ss_pred HHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCC------------eEE
Confidence 33344445556776432 23477 99997 4 11256777753 578
Q ss_pred EEEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEecccccEEEEee----cCCCCCCCCCCcccccCcccceEEEE
Q 022995 203 FLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFYS----LLPNGTIDPTSIHGSCPVVKGEKWVA 278 (289)
Q Consensus 203 ~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~n----~~~~g~~D~~~~H~g~PV~~G~K~v~ 278 (289)
+|+. |. .||==+... +. .+.|+|.+|..||--- .+.||. -..+.|++... ..+++++
T Consensus 222 lL~q--d~-v~GLQV~~~-------------~g-Wi~V~p~pgalvVNiGD~l~~~TnG~-~kS~~HRVv~~-~~~R~Si 282 (331)
T 1odm_A 222 VLYQ--SN-VQNLQVETA-------------AG-YQDIEADDTGYLINCGSYMAHLTNNY-YKAPIHRVKWV-NAERQSL 282 (331)
T ss_dssp EEEE--CS-SCCEEEEET-------------TE-EEECCCCTTSEEEEECHHHHHHTTTS-SCCCCEEEECC-CSCEEEE
T ss_pred EEee--CC-CCCEEEEcC-------------CC-eEECCCCCCeEEEEccHHHHHHhCCE-eeCCCceeCCC-CCCEEEE
Confidence 8855 32 355333321 12 6889999998887431 123343 35789998532 4578988
Q ss_pred Eecccc
Q 022995 279 TKWIRD 284 (289)
Q Consensus 279 ~~W~~~ 284 (289)
.-+++-
T Consensus 283 a~F~~P 288 (331)
T 1odm_A 283 PFFVNL 288 (331)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 777653
No 23
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=49.67 E-value=11 Score=21.87 Aligned_cols=18 Identities=17% Similarity=0.512 Sum_probs=14.3
Q ss_pred ccccCChhHHHHHHHHHH
Q 022995 13 LKSKIELPFVFLACLFFF 30 (289)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~ 30 (289)
||+.||--.+-++|+++|
T Consensus 1 MrkhLG~~wlai~c~LLf 18 (30)
T 1z65_A 1 MKNRLGTWWVAILCMLLA 18 (30)
T ss_dssp CCSSCSSHHHHHHHHHHH
T ss_pred CcchhhhhHHHHHHHHHH
Confidence 688899888888887655
No 24
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=49.56 E-value=38 Score=30.16 Aligned_cols=104 Identities=19% Similarity=0.222 Sum_probs=60.3
Q ss_pred HHHHHHHHcCCCCcc--------cccceeeecCCC------CccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcce
Q 022995 151 IEEKIAKVTMLPRIN--------GEAFNILRYKIG------QKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGET 216 (289)
Q Consensus 151 I~~Ri~~~~g~p~~~--------~E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT 216 (289)
|-+-++..+|++.+. ...+++++|.+. -...+|.|.. .+|+|+ .|. .||==
T Consensus 145 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~-v~GLq 209 (312)
T 3oox_A 145 VLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN------------TITLLL--GAE-EGGLE 209 (312)
T ss_dssp HHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS------------SEEEEE--CCT-TSCEE
T ss_pred HHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc------------eEEEEe--EcC-cCceE
Confidence 333444456776431 234788899862 1345787763 578874 443 45533
Q ss_pred eccCCCCCCCCCCCCcccccceEEecccccEEEEee----cCCCCCCCCCCcccccCcc----cceEEEEEeccc
Q 022995 217 MFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFYS----LLPNGTIDPTSIHGSCPVV----KGEKWVATKWIR 283 (289)
Q Consensus 217 ~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~n----~~~~g~~D~~~~H~g~PV~----~G~K~v~~~W~~ 283 (289)
+.... ...+.|+|.+|..||--- .+.||. -..+.|++.... ...+|++.-+++
T Consensus 210 V~~~~-------------g~W~~V~p~pg~~vVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~~~~~R~Sia~F~~ 270 (312)
T 3oox_A 210 VLDRD-------------GQWLPINPPPGCLVINIGDMLERLTNNV-LPSTVHRVVNPPPERRGVPRYSTPFFLH 270 (312)
T ss_dssp EECTT-------------SCEEECCCCSSCEEEEECHHHHHHTTTS-SCCCCEEECCCCGGGTTSCEEECCEEEC
T ss_pred EECCC-------------CcEEECCCCCCeEEEEhHHHHHHHhCCe-ecCCCceEeCCCccCCCCCEEEEEEEec
Confidence 33221 146899999998887421 123443 357899985432 235888876654
No 25
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=44.10 E-value=19 Score=31.16 Aligned_cols=41 Identities=17% Similarity=-0.010 Sum_probs=34.3
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCccc--ceEEEEEecccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK--GEKWVATKWIRD 284 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~--G~K~v~~~W~~~ 284 (289)
..+.++=++|++|+|.| .+++|+..+-.. +.++..+.|+.+
T Consensus 230 ~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~g 272 (273)
T 1nx8_A 230 YYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTAD 272 (273)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEEC
T ss_pred eEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeeccc
Confidence 46788889999999998 589999999864 478999988753
No 26
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=39.29 E-value=20 Score=32.59 Aligned_cols=41 Identities=10% Similarity=0.352 Sum_probs=33.9
Q ss_pred ceEEecccccEEEEeecCCCCCCCCCCcccccCccc----ceEEEEEeccccc
Q 022995 237 GLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK----GEKWVATKWIRDQ 285 (289)
Q Consensus 237 ~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~----G~K~v~~~W~~~~ 285 (289)
.+.++=++|++++|.| .+++|+..+... +.+|..+.|+...
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~d 335 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLTD 335 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEESC
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEccc
Confidence 5788889999999998 589999988752 4799999998653
No 27
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=38.94 E-value=22 Score=32.18 Aligned_cols=42 Identities=19% Similarity=0.334 Sum_probs=34.3
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCcc---cc-eEEEEEeccccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVV---KG-EKWVATKWIRDQ 285 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~---~G-~K~v~~~W~~~~ 285 (289)
..+.++=++|++++|.| .+++|+..+-. .| .+|..+.|+...
T Consensus 295 ~~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~d 340 (358)
T 2wbq_A 295 SLYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITRD 340 (358)
T ss_dssp HCEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEESC
T ss_pred hceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEecC
Confidence 35788889999999998 58999988865 24 799999998653
No 28
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=36.29 E-value=23 Score=26.77 Aligned_cols=25 Identities=32% Similarity=0.571 Sum_probs=20.8
Q ss_pred EecccccEEEEeecCCCCCCCCCCcccccCcccceEEEEEeccccc
Q 022995 240 VKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVATKWIRDQ 285 (289)
Q Consensus 240 V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~~~~ 285 (289)
.+|++|+.|+|. |..|+++.|-+..
T Consensus 62 YrP~r~D~Vv~~---------------------Gk~y~Vtr~~~~n 86 (102)
T 2pp6_A 62 VIPRRGDRVVLR---------------------GSEFTVTRIRRFN 86 (102)
T ss_dssp CCCCTTCEEEET---------------------TEEEEEEEEEEET
T ss_pred cccCCCCEEEEc---------------------CcEEEEEEEEEEC
Confidence 689999999993 8899999886543
No 29
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=35.51 E-value=30 Score=30.05 Aligned_cols=42 Identities=7% Similarity=0.005 Sum_probs=34.8
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCcc-cceEEEEEeccccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVV-KGEKWVATKWIRDQ 285 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~-~G~K~v~~~W~~~~ 285 (289)
.-+.++=++|++++|.| .+++|+..+-. .+.++..+.|+...
T Consensus 234 ~~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 234 FQVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred cEEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 35788889999999998 58999999976 45799999998653
No 30
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=35.44 E-value=56 Score=23.81 Aligned_cols=49 Identities=18% Similarity=0.177 Sum_probs=32.7
Q ss_pred EEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcccce
Q 022995 204 LVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGE 274 (289)
Q Consensus 204 liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~ 274 (289)
+.-++|..+|+...|.... ..+.|--..|....|.| ...|.|+|+..|.
T Consensus 5 v~~~~~l~~g~~~~~~~~g-------------~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g~ 53 (106)
T 3dqy_A 5 ILRQGDLPPGEMQRYEGGP-------------EPVMVCNVDGEFFAVQD---------TCTHGDWALSDGY 53 (106)
T ss_dssp EEEGGGSCTTCEEEECCSS-------------SCEEEEEETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEHHHCCCCCEEEEEECC-------------EEEEEEEECCEEEEEeC---------cCCCCCCCCcCcE
Confidence 4456777777766664321 23444447788888876 7889999998763
No 31
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=30.80 E-value=34 Score=30.45 Aligned_cols=41 Identities=24% Similarity=0.463 Sum_probs=34.1
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCccc---c-eEEEEEecccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK---G-EKWVATKWIRD 284 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~---G-~K~v~~~W~~~ 284 (289)
..+.++=++|++|+|.| .+++|+-.+... | .+|..+.|+..
T Consensus 258 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~ 302 (324)
T 1ds1_A 258 VTEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRT 302 (324)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEEC
T ss_pred ccEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEec
Confidence 46889999999999998 589999888753 2 79999999854
No 32
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=30.40 E-value=15 Score=35.09 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=48.2
Q ss_pred CCceEEEEEEecCCC--CCCcceeccCCCC-------C-----CCCCC-C------C--ccc------ccceEEec--cc
Q 022995 196 KSQRVASFLVYLTDL--EEGGETMFPFENG-------M-----NADGS-Y------D--YQK------CIGLKVKP--RQ 244 (289)
Q Consensus 196 ~~~R~~T~liYLNdv--~eGGeT~Fp~~~~-------~-----~~~~~-~------~--~~~------~~~~~V~P--~~ 244 (289)
...|.+-=.+=|++. .+||=.+.| ... + ..+.+ | . ..+ ...+...| ++
T Consensus 295 s~FR~fQGwlaLS~~gP~eGtL~v~P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~~~mv~iP~veP 373 (461)
T 2dbn_A 295 SVFRTFQGWTALSDMLPGQGLLHVVP-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEA 373 (461)
T ss_dssp CSCCSEEEEEESSCBCTTSSCEEECS-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHHTTCEECCCBCT
T ss_pred cccceeeeehhccCCCCCCCcEEEee-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCcccCceeeCCCCCC
Confidence 455667777778875 578888888 321 0 00111 0 0 000 02344555 68
Q ss_pred ccEEEEeecCCCCCCCCCCcccccCcccceEEEEEecc
Q 022995 245 GDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVATKWI 282 (289)
Q Consensus 245 G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~~~W~ 282 (289)
|+.|+|.. ++.|++.|+..|..+....+|
T Consensus 374 GD~V~WH~---------D~iH~V~~~h~g~~~s~V~YI 402 (461)
T 2dbn_A 374 GDSVWWHC---------DVIHSVAPVENQQGWGNVMYI 402 (461)
T ss_dssp TCEEEEET---------TCCEEECCBSSCCSCCCEEEC
T ss_pred CCEEEEcC---------CCccccccCCCCCcceeEEEe
Confidence 99999975 899999999999877666554
No 33
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=29.95 E-value=39 Score=29.25 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=24.3
Q ss_pred cccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccC
Q 022995 180 YNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPF 220 (289)
Q Consensus 180 y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~ 220 (289)
-.+|.|..... ..-.+++|.=+....+||+|.|-.
T Consensus 96 ~~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 96 DNWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp CSCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEE
T ss_pred CCcEeeccCcc------CCCceEEEEEEecCCCCCcceeee
Confidence 35999987542 233566666666678899999964
No 34
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=29.31 E-value=35 Score=29.89 Aligned_cols=36 Identities=17% Similarity=0.120 Sum_probs=25.0
Q ss_pred CccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceecc
Q 022995 178 QKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFP 219 (289)
Q Consensus 178 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp 219 (289)
+...+|.|..... ..-.+++|.-+.-...||+|.|-
T Consensus 92 ~~~~wH~D~sy~~------~pp~~~~l~~~~~p~~GG~T~~~ 127 (277)
T 3pvj_A 92 DNAVWHTDVTFLP------TPALGAVLSAKQLPAYGGDTLWA 127 (277)
T ss_dssp GGSSCBCTTTTSS------SCCCEEEEEEEECCSSCCCEEEE
T ss_pred cCCCceeeCCCcC------CCCceEEEEeeccCCCCCCcEee
Confidence 4577999997542 12346666666667889999985
No 35
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=25.81 E-value=39 Score=29.21 Aligned_cols=23 Identities=17% Similarity=0.294 Sum_probs=20.0
Q ss_pred cEEEecCCCCHHHHHHHHHHhhc
Q 022995 87 RALYFPNFATPEQCKSIINMAKL 109 (289)
Q Consensus 87 ~i~~i~nfLs~eEC~~Li~~a~~ 109 (289)
..+++++||+++||+.|.+.++.
T Consensus 16 Gyvvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 16 GFLVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp SEEEETTSSCHHHHHHHHHHHHH
T ss_pred CEEEecCCCCHHHHHHHHHHHHH
Confidence 46789999999999999988765
No 36
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=25.48 E-value=46 Score=29.14 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=0.0
Q ss_pred CCccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceec
Q 022995 177 GQKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMF 218 (289)
Q Consensus 177 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~F 218 (289)
+....+|.|.... ...-.+++|.=+.....||+|.|
T Consensus 102 ~~~~~wHtD~sy~------~~pP~~~~L~c~~~p~~GG~T~~ 137 (301)
T 1oih_A 102 QRANSWHTDVTFV------EAYPKASILRSVVAPASGGDTVW 137 (301)
T ss_dssp -CCCSCBCTTTTS------SSCCSEEEEEEEECCSSCCCEEE
T ss_pred CcCcCCEecccCc------CCCCceEEEEEeecCCCCCcccc
No 37
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=25.18 E-value=1.6e+02 Score=22.11 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=34.5
Q ss_pred ceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcccc
Q 022995 198 QRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG 273 (289)
Q Consensus 198 ~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G 273 (289)
-+.+.-+.-++|..+|+...+-...+. .-+-++...|..-.+.| ...|.+.|+.+|
T Consensus 7 ~~~W~~Vc~~~dL~~g~~~~~~~~~G~-----------~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~~ 62 (119)
T 4aiv_A 7 IQVWTTACAYDHLIPGRGVGVLLDDGS-----------QVALFRLDDGSVHAVGN---------VDPFSGAAVMSR 62 (119)
T ss_dssp EEEEEEEEEGGGSCTTCCEEEECTTSC-----------EEEEEECTTSCEEEEES---------BCTTTCCBCGGG
T ss_pred ccceeEeeEHHHcCCCCceEEEEcCCc-----------EEEEEEcCCCeEEEEEC---------CCCCCCCccccC
Confidence 356777788888877765544322110 11234455566666655 789999998765
No 38
>3a4c_A DNA replication factor CDT1; alpha-beta structure, cell cycle, DNA- binding, nucleus, phosphoprotein, proto-oncogene, UBL conjugation; HET: DNA; 1.89A {Mus musculus} PDB: 2rqq_A*
Probab=24.62 E-value=1.4e+02 Score=22.53 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=37.9
Q ss_pred ecCCCCHHHHHHHHHHhhcCCccceeeecCCceeecccceeecceEEecCCCChhHHHHHHHHHHHH
Q 022995 91 FPNFATPEQCKSIINMAKLNLRPSTLALRKGETVDNTQGIRTSSGVFISAAEDESGTLDLIEEKIAK 157 (289)
Q Consensus 91 i~nfLs~eEC~~Li~~a~~~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~~~~~~i~~~I~~Ri~~ 157 (289)
|...||+.|.+..+++... +-|..+.. ..+|+..-.-++...|.+.++++++....+
T Consensus 47 yr~~ls~~EmE~hl~lL~e-llPdWls~---------~~vR~~~ylKl~k~~dl~~i~~rLe~~a~~ 103 (106)
T 3a4c_A 47 CQTALSPGEMEKHLVLLAE-LLPDWLSL---------HRIRTDTYVKLDKAVDLAGLTARLAHHVHA 103 (106)
T ss_dssp SCCSCCHHHHHHHHHHHHH-HCTTTEEE---------EEETTEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHH-hCcchhee---------eeeeccceeeeehhhhHHHHHHHHHHHHHh
Confidence 6788999999999888865 44555432 345544444455555666788888766544
No 39
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=24.06 E-value=48 Score=30.54 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=34.0
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCccc--c-eEEEEEecccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVK--G-EKWVATKWIRD 284 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~--G-~K~v~~~W~~~ 284 (289)
..+.++=++|++++|.| .+++|+...-.. | .++....|+..
T Consensus 327 ~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~ 370 (388)
T 3o2g_A 327 SKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADW 370 (388)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECH
T ss_pred hEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcc
Confidence 34888889999999998 589999988763 4 78999999854
No 40
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=23.26 E-value=52 Score=29.23 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=24.3
Q ss_pred CccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceecc
Q 022995 178 QKYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFP 219 (289)
Q Consensus 178 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp 219 (289)
....||.|..... ..-.+++|.-+.-...||+|.|-
T Consensus 98 ~~~~wH~D~s~~~------~pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAA------NYPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCcc------CCCceeEEEEeecCCCCCCCeeE
Confidence 4567999997642 12245666666667899999985
No 41
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=23.05 E-value=1.2e+02 Score=22.04 Aligned_cols=51 Identities=18% Similarity=0.190 Sum_probs=31.3
Q ss_pred EEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcccce
Q 022995 204 LVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGE 274 (289)
Q Consensus 204 liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~ 274 (289)
+.-+++..+|+...|....+. .-+.++-..|....|.| ...|.|+|+..|.
T Consensus 5 v~~~~~l~~g~~~~~~~~~g~-----------~v~v~r~~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (111)
T 1vm9_A 5 ICSLDDIWVGEMETFETSDGT-----------EVLIVNSEEHGVKAYQA---------MCPHQEILLSEGS 55 (111)
T ss_dssp EEEGGGSCTTCEEEEECTTCC-----------EEEEEEETTTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEHHHCCCCCeEEEEEcCCC-----------EEEEEEeCCCeEEEEeC---------cCCCCCcCCCCce
Confidence 344666666665555420110 22344555788888876 7889999998763
No 42
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=22.35 E-value=96 Score=23.29 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=34.0
Q ss_pred EEEEEecCCCCCCcceeccCCCCCCCCCCCCcccccceEEecccccEEEEeecCCCCCCCCCCcccccCcccc
Q 022995 201 ASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG 273 (289)
Q Consensus 201 ~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G 273 (289)
+..+.-+++..+|+...|.... ..+.|--..|....|.| ...|.|+|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g-------------~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDG-------------DEVMVVRDGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETT-------------EEEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECC-------------EEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 4455668888887777665321 22333335788888876 788999999877
No 43
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=22.15 E-value=1.6e+02 Score=21.35 Aligned_cols=50 Identities=16% Similarity=0.179 Sum_probs=31.7
Q ss_pred EEEEecCCCCCCcceeccCCCCCCCCCCCCccccc-ceEEecccccEEEEeecCCCCCCCCCCcccccCcccc
Q 022995 202 SFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCI-GLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG 273 (289)
Q Consensus 202 T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~-~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G 273 (289)
..+.-+++..+|+...|.... . . -+.++- .|....|.| ...|.|+|+..|
T Consensus 5 ~~v~~~~~l~~g~~~~~~~~g-~-----------~~v~v~r~-~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 5 LRLCQVASVKDGEPVAVYQEK-M-----------PALAVYNV-DGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEGGGCBTTBCEEECCTT-S-----------SCEEEEEE-TTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEEEHhHcCCCCeEEEEECC-e-----------eEEEEEEE-CCEEEEEeC---------cCCCCCCCCCCC
Confidence 345567777777766665321 0 1 223333 777778876 788999999876
No 44
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=21.74 E-value=1.7e+02 Score=25.39 Aligned_cols=88 Identities=17% Similarity=0.152 Sum_probs=53.4
Q ss_pred cceeeecCCCC--------ccccCcccCCCCCCCCCCCceEEEEEEecCCCCCCcceeccCCCCCCCCCCCCcccccceE
Q 022995 168 AFNILRYKIGQ--------KYNSHYDAFDPQEYGPQKSQRVASFLVYLTDLEEGGETMFPFENGMNADGSYDYQKCIGLK 239 (289)
Q Consensus 168 ~lqv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNdv~eGGeT~Fp~~~~~~~~~~~~~~~~~~~~ 239 (289)
.+++++|.+.. ...+|.|.. .+|+|+ .| ..||==+.... ...+.
T Consensus 151 ~lr~~~YP~~~~~~~~~~~g~~~HtD~g------------~lTlL~--qd-~~~GLqV~~~~-------------g~W~~ 202 (280)
T 3on7_A 151 LLRILHYPPMTGDEEMGAIRAAAHEDIN------------LITVLP--TA-NEPGLQVKAKD-------------GSWLD 202 (280)
T ss_dssp EEEEEEECCCCTTCCCCSEEEEEECCCS------------SEEEEE--CC-SCCCEEEECTT-------------SCEEE
T ss_pred eEEEEECCCCCCccccCcccccCCCCCC------------eEEEEE--ec-CCCCeEEEcCC-------------CCEEE
Confidence 47889997531 255787763 478775 34 23553343221 14789
Q ss_pred EecccccEEEEee----cCCCCCCCCCCcccccCcc----cceEEEEEecccc
Q 022995 240 VKPRQGDGLLFYS----LLPNGTIDPTSIHGSCPVV----KGEKWVATKWIRD 284 (289)
Q Consensus 240 V~P~~G~allF~n----~~~~g~~D~~~~H~g~PV~----~G~K~v~~~W~~~ 284 (289)
|+|.+|..||--- .+.||. -..+.|++.... ...+|++.-+++-
T Consensus 203 V~p~pg~~vVNiGD~l~~~Tng~-~kS~~HRVv~~~~~~~~~~R~Si~~F~~P 254 (280)
T 3on7_A 203 VPSDFGNIIINIGDMLQEASDGY-FPSTSHRVINPEGTDKTKSRISLPLFLHP 254 (280)
T ss_dssp CCCCTTCEEEEECHHHHHHTTTS-SCCCCEEEECCTTCCTTSCEEECCEEECC
T ss_pred CcCCCCEEEEEcChHHHHHhCCc-ccCCCceEeCCCCCCCCCCeEEEEEEEcC
Confidence 9999998887531 123443 368899975542 3478888766643
No 45
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=21.33 E-value=50 Score=29.33 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=26.4
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCcccceEEEE
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKGEKWVA 278 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G~K~v~ 278 (289)
..+.++=++|++|+|.| ..++|+..|- .|.+.++
T Consensus 292 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l 325 (330)
T 2q4a_A 292 ECVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVL 325 (330)
T ss_dssp HCBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEE
T ss_pred hEeecCCCCCCEEEEec--------ccccccCCCC-CCCceEE
Confidence 35677778999999998 4899999995 5754444
No 46
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.01 E-value=75 Score=27.89 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=32.9
Q ss_pred cceEEecccccEEEEeecCCCCCCCCCCcccccCcccc-eEEEEEeccccc
Q 022995 236 IGLKVKPRQGDGLLFYSLLPNGTIDPTSIHGSCPVVKG-EKWVATKWIRDQ 285 (289)
Q Consensus 236 ~~~~V~P~~G~allF~n~~~~g~~D~~~~H~g~PV~~G-~K~v~~~W~~~~ 285 (289)
.-++.+=++|++|+|.| .+++|+..+-..+ .++.-+.|+.+.
T Consensus 240 ~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i~gd 282 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHIHAE 282 (293)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEEcCC
Confidence 45778888999999998 5899999876543 578888887643
Done!