Query 022998
Match_columns 289
No_of_seqs 255 out of 1720
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 07:42:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 5.3E-45 1.1E-49 310.5 22.4 200 81-282 2-203 (203)
2 PRK03482 phosphoglycerate muta 100.0 1.1E-43 2.4E-48 305.0 22.4 203 81-284 1-208 (215)
3 PRK15004 alpha-ribazole phosph 100.0 2.1E-43 4.5E-48 299.8 22.3 196 82-279 1-197 (199)
4 TIGR03848 MSMEG_4193 probable 100.0 3.1E-43 6.7E-48 299.9 21.4 195 83-280 1-201 (204)
5 PRK14116 gpmA phosphoglyceromu 100.0 1.6E-42 3.4E-47 300.1 20.2 188 81-269 1-221 (228)
6 PRK14119 gpmA phosphoglyceromu 100.0 1.9E-41 4E-46 293.5 21.3 186 81-267 1-219 (228)
7 PRK14117 gpmA phosphoglyceromu 100.0 3E-41 6.4E-46 292.4 21.6 192 81-273 1-225 (230)
8 PRK07238 bifunctional RNase H/ 100.0 1.2E-40 2.7E-45 308.2 26.5 203 78-282 168-372 (372)
9 PRK13462 acid phosphatase; Pro 100.0 4.7E-41 1E-45 285.8 21.8 192 80-283 4-199 (203)
10 PRK01112 phosphoglyceromutase; 100.0 3.9E-41 8.5E-46 290.9 21.4 187 81-268 1-219 (228)
11 TIGR03162 ribazole_cobC alpha- 100.0 4.9E-41 1.1E-45 279.9 18.6 176 84-262 1-177 (177)
12 PRK14118 gpmA phosphoglyceromu 100.0 1.1E-40 2.5E-45 288.3 20.3 185 82-267 1-218 (227)
13 PRK01295 phosphoglyceromutase; 100.0 1.8E-40 3.9E-45 282.9 21.0 188 80-268 1-196 (206)
14 PRK14120 gpmA phosphoglyceromu 100.0 4.5E-40 9.8E-45 287.3 22.3 190 79-269 2-222 (249)
15 COG0406 phoE Broad specificity 100.0 6E-40 1.3E-44 280.4 21.9 187 81-268 2-191 (208)
16 TIGR01258 pgm_1 phosphoglycera 100.0 6.3E-40 1.4E-44 286.1 21.9 193 82-275 1-226 (245)
17 PRK14115 gpmA phosphoglyceromu 100.0 2.4E-39 5.1E-44 282.8 22.4 188 82-270 1-221 (247)
18 PTZ00322 6-phosphofructo-2-kin 100.0 4.4E-35 9.4E-40 288.5 19.4 193 81-282 419-637 (664)
19 PF00300 His_Phos_1: Histidine 100.0 5.4E-35 1.2E-39 237.9 10.9 154 83-237 1-158 (158)
20 PTZ00122 phosphoglycerate muta 100.0 1.6E-33 3.5E-38 251.8 20.4 181 81-287 102-297 (299)
21 PTZ00123 phosphoglycerate muta 100.0 3.8E-33 8.1E-38 242.6 20.0 173 94-267 1-206 (236)
22 KOG0235 Phosphoglycerate mutas 100.0 2.6E-33 5.6E-38 235.3 17.4 188 80-268 4-202 (214)
23 smart00855 PGAM Phosphoglycera 100.0 3.5E-33 7.6E-38 227.7 13.7 149 83-237 1-155 (155)
24 COG0588 GpmA Phosphoglycerate 100.0 6E-32 1.3E-36 222.8 13.3 188 81-270 1-222 (230)
25 cd07067 HP_PGM_like Histidine 100.0 2.1E-28 4.7E-33 198.7 16.1 141 83-268 1-145 (153)
26 KOG4609 Predicted phosphoglyce 99.9 4.2E-25 9.1E-30 181.6 13.7 180 80-287 93-282 (284)
27 KOG4754 Predicted phosphoglyce 99.9 1.1E-24 2.5E-29 179.0 15.2 189 75-265 8-225 (248)
28 cd07040 HP Histidine phosphata 99.9 2.3E-24 4.9E-29 174.4 14.5 136 83-266 1-143 (153)
29 TIGR00249 sixA phosphohistidin 99.9 1.3E-22 2.8E-27 164.8 18.5 145 82-275 1-149 (152)
30 KOG0234 Fructose-6-phosphate 2 99.9 1.6E-22 3.6E-27 184.2 16.6 195 80-281 238-435 (438)
31 PRK10848 phosphohistidine phos 99.9 1.7E-21 3.6E-26 159.3 18.6 145 82-275 1-149 (159)
32 PRK06193 hypothetical protein; 99.9 2.3E-20 5E-25 157.5 15.8 150 78-272 39-194 (206)
33 PRK15416 lipopolysaccharide co 99.8 3.4E-19 7.4E-24 149.2 16.8 136 79-268 52-189 (201)
34 COG2062 SixA Phosphohistidine 99.8 3.2E-19 6.9E-24 144.4 14.8 138 81-266 1-142 (163)
35 KOG3734 Predicted phosphoglyce 99.8 3.3E-18 7.2E-23 148.1 14.1 167 80-247 11-219 (272)
36 cd07061 HP_HAP_like Histidine 98.3 3.1E-05 6.8E-10 67.4 15.1 58 82-151 4-73 (242)
37 PF00328 His_Phos_2: Histidine 96.9 0.001 2.2E-08 60.4 4.0 44 108-151 62-116 (347)
38 KOG3720 Lysosomal & prostatic 96.4 0.0076 1.7E-07 56.7 6.6 67 82-151 36-127 (411)
39 PRK10173 glucose-1-phosphatase 96.1 0.016 3.4E-07 54.6 6.6 70 82-151 33-128 (413)
40 PRK10172 phosphoanhydride phos 95.9 0.031 6.7E-07 52.8 7.6 70 82-151 36-130 (436)
41 KOG1057 Arp2/3 complex-interac 92.5 0.13 2.8E-06 51.0 3.8 44 108-151 511-571 (1018)
42 KOG1382 Multiple inositol poly 73.3 7 0.00015 37.1 5.2 44 108-151 132-182 (467)
43 PF12048 DUF3530: Protein of u 58.0 29 0.00062 31.4 6.1 44 204-247 174-217 (310)
44 PRK04946 hypothetical protein; 49.8 66 0.0014 26.8 6.4 44 200-244 102-148 (181)
45 PF14606 Lipase_GDSL_3: GDSL-l 43.4 24 0.00051 29.3 2.8 31 202-232 72-103 (178)
46 COG2247 LytB Putative cell wal 36.3 2.9E+02 0.0062 25.3 8.6 122 130-260 30-166 (337)
47 PF07131 DUF1382: Protein of u 35.9 40 0.00086 22.4 2.4 27 137-164 9-35 (61)
48 COG0161 BioA Adenosylmethionin 35.9 1.8E+02 0.0039 27.9 7.8 109 117-226 89-216 (449)
49 PRK00035 hemH ferrochelatase; 34.3 3.5E+02 0.0075 24.5 9.3 122 107-236 70-203 (333)
50 PF11760 CbiG_N: Cobalamin syn 33.7 1.2E+02 0.0027 21.8 4.9 54 212-276 3-56 (84)
51 KOG3672 Histidine acid phospha 33.1 77 0.0017 29.7 4.6 42 108-149 168-224 (487)
52 COG1134 TagH ABC-type polysacc 32.8 69 0.0015 28.0 4.1 28 204-232 180-207 (249)
53 PLN02517 phosphatidylcholine-s 31.0 63 0.0014 32.1 4.0 35 199-233 188-223 (642)
54 cd07397 MPP_DevT Myxococcus xa 29.7 1E+02 0.0022 26.8 4.8 34 201-236 127-160 (238)
55 PF02450 LCAT: Lecithin:choles 29.7 57 0.0012 30.5 3.4 30 202-231 98-127 (389)
56 COG1136 SalX ABC-type antimicr 26.9 93 0.002 26.9 3.9 30 207-236 178-207 (226)
57 COG0761 lytB 4-Hydroxy-3-methy 26.8 49 0.0011 29.6 2.3 27 133-159 12-38 (294)
58 KOG2728 Uncharacterized conser 25.6 64 0.0014 28.3 2.6 34 201-234 9-42 (302)
59 COG1116 TauB ABC-type nitrate/ 24.5 83 0.0018 27.6 3.2 26 208-233 167-192 (248)
60 PRK13695 putative NTPase; Prov 24.0 2.2E+02 0.0048 22.8 5.6 33 210-243 115-147 (174)
61 PF13479 AAA_24: AAA domain 23.4 1.2E+02 0.0026 25.5 4.0 37 200-236 105-141 (213)
62 PF01764 Lipase_3: Lipase (cla 23.2 2.6E+02 0.0056 21.1 5.7 39 205-243 45-86 (140)
63 PRK09191 two-component respons 21.7 3.8E+02 0.0082 22.6 7.0 43 201-243 116-158 (261)
64 KOG3734 Predicted phosphoglyce 21.7 34 0.00074 30.4 0.3 57 107-163 41-103 (272)
65 PF09370 TIM-br_sig_trns: TIM- 20.8 70 0.0015 28.3 2.0 36 200-236 191-226 (268)
66 TIGR00824 EIIA-man PTS system, 20.0 2E+02 0.0043 21.7 4.3 30 198-229 36-65 (116)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=5.3e-45 Score=310.46 Aligned_cols=200 Identities=25% Similarity=0.391 Sum_probs=185.9
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCCEEEECChHHHHHHHHHHHhCCCCCeEEeCC
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 160 (289)
+++||||||||+.+|..+.++|+.| +|||+.|++||+.+++.|+...++.|||||+.||+|||+++++..++++.+++.
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d-~~Lt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKN-SALTENGILQAKQLGERMKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEH 80 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCC-CCcCHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHhcCCCCceECcC
Confidence 4789999999999999999999988 789999999999999999988999999999999999999999888999999999
Q ss_pred CccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHH
Q 022998 161 LKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRALIC 239 (289)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l~~ 239 (289)
|+|+++|.|+|++..++.+.+|+.+..|+.++..+.+|++||.+++.+|+..+++.+... .+++|+|||||++|+++++
T Consensus 81 l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~~~ 160 (203)
T PRK13463 81 FYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQSTSGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLVG 160 (203)
T ss_pred ceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCCCCeEHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHH
Confidence 999999999999999999999999999999888889999999999999999999998764 6789999999999999999
Q ss_pred HHhCCCCCCcccc-cccCceEEEEEEecCCcEEEEEecCCCCCC
Q 022998 240 TALGLGPERFRAI-DVNNGGITVFIFNQNGEAMLQSLNMTSHMY 282 (289)
Q Consensus 240 ~l~g~~~~~~~~~-~~~n~si~~l~~~~~g~~~l~~~n~~~hL~ 282 (289)
+++|.+.+.++.+ .++||+++++++++ +.+.+..+|+++||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~~~n~~~~l~ 203 (203)
T PRK13463 161 HFAGIEIENVWDDPFMHSASLSIIEFED-GKGEVKQFADISHFQ 203 (203)
T ss_pred HHhCCCHHHHhhccCccCceEEEEEEeC-CcEEEEEeccccccC
Confidence 9999998877765 37999999999964 568899999999984
No 2
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.1e-43 Score=304.97 Aligned_cols=203 Identities=25% Similarity=0.281 Sum_probs=179.3
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCCEEEECChHHHHHHHHHHHhCCCCCeEEeCC
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 160 (289)
|++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|++..++.|||||+.||+|||+++++.+++++.+++.
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d-~~Lt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSD-SPLTAKGEQQAMQVAERAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDPR 79 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCC-CCcCHHHHHHHHHHHHHHhcCCCCEEEECCcHHHHHHHHHHHHhcCCCeeEChh
Confidence 4789999999999999999999888 789999999999999999988999999999999999999999999999999999
Q ss_pred CccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHHHHHHHHH
Q 022998 161 LKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILL-TPGENFLVVTHKSILRALIC 239 (289)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~-~~~~~vlvVsHg~~i~~l~~ 239 (289)
|+|+++|.|+|++..++....+.....+...+..+.+|++||..++.+|+..+++.+.. ..+++|||||||++|+++++
T Consensus 80 L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l~~ 159 (215)
T PRK03482 80 LRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIPEGESMQELSDRMHAALESCLELPQGSRPLLVSHGIALGCLVS 159 (215)
T ss_pred ccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCCCCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHH
Confidence 99999999999999888654432222233334456789999999999999999999876 35678999999999999999
Q ss_pred HHhCCCCCCcccccccCceEEEEEEecC----CcEEEEEecCCCCCCCC
Q 022998 240 TALGLGPERFRAIDVNNGGITVFIFNQN----GEAMLQSLNMTSHMYSD 284 (289)
Q Consensus 240 ~l~g~~~~~~~~~~~~n~si~~l~~~~~----g~~~l~~~n~~~hL~~~ 284 (289)
+++|.+.+.++.+.++||++++|+++.+ +.|.+..+|++.||.+.
T Consensus 160 ~l~~~~~~~~~~~~~~n~sis~~~~~~~~~~~~~~~~~~~n~~~hl~~~ 208 (215)
T PRK03482 160 TILGLPAWAERRLRLRNCSISRVDYQESPWLASGWVVETAGDVSHLDAP 208 (215)
T ss_pred HHhCCChhhhhccCCCCcEEEEEEEeCCccccceEEEEeeCChhhhCcc
Confidence 9999998888888899999999999753 46999999999999754
No 3
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=2.1e-43 Score=299.83 Aligned_cols=196 Identities=26% Similarity=0.334 Sum_probs=181.9
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCCEEEECChHHHHHHHHHHHhCCCCCeEEeCCC
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSL 161 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L 161 (289)
++||||||||+.+|..+.++|+.| +|||+.|++||+.+++.|++..+++|||||+.||+|||+++++..++++.+++.|
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d-~pLt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L 79 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAP-TPLTARGIEQAQNLHTLLRDVPFDLVLCSELERAQHTARLVLSDRQLPVHIIPEL 79 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCC-CCcCHHHHHHHHHHHHHHhCCCCCEEEECchHHHHHHHHHHHhcCCCCceeChhh
Confidence 469999999999999999999988 7899999999999999999989999999999999999999999889999999999
Q ss_pred ccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHH
Q 022998 162 KEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRALICT 240 (289)
Q Consensus 162 ~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l~~~ 240 (289)
+|+++|.|+|++..++...+|+.+..|..++....+|++||..++.+|+..+++.+... ++++|+|||||++|++++++
T Consensus 80 ~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gEs~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~ 159 (199)
T PRK15004 80 NEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLIAR 159 (199)
T ss_pred eeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCCCCcCHHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHHHH
Confidence 99999999999999999999998888988777778899999999999999999999863 57899999999999999999
Q ss_pred HhCCCCCCcccccccCceEEEEEEecCCcEEEEEecCCC
Q 022998 241 ALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTS 279 (289)
Q Consensus 241 l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~ 279 (289)
++|.+...++.+.++||+++.++++ ++.+.+..+|+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~n~~~ 197 (199)
T PRK15004 160 LLGMPAEAMWHFRVEQGCWSAIDIN-QGFATLRVLNSRA 197 (199)
T ss_pred HhCCCHHHHhccccCCceEEEEEec-CCcEEEEEecccc
Confidence 9999998888889999999999996 4567788888764
No 4
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=3.1e-43 Score=299.92 Aligned_cols=195 Identities=23% Similarity=0.284 Sum_probs=177.8
Q ss_pred EEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCCEEEECChHHHHHHHHHHHhCCCCCeEEeCCCc
Q 022998 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSLK 162 (289)
Q Consensus 83 ~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~ 162 (289)
+||||||||+.+|..+.++|+.|+.|||+.|++||+.++++|++..++.|||||+.||+|||+++++.+++++.+++.|+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~ 80 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLADLPIAAIVSSPLERCRETAEPIAEARGLPPRVDERLG 80 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhcCCCCEEEeCcHHHHHHHHHHHHHhcCCCceECcccc
Confidence 48999999999999999999996578999999999999999998899999999999999999999998899999999999
Q ss_pred cccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC------CCCeEEEEeCHHHHHH
Q 022998 163 EAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT------PGENFLVVTHKSILRA 236 (289)
Q Consensus 163 E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~------~~~~vlvVsHg~~i~~ 236 (289)
|+++|.|+|++..++... ..+..|..++..+.+|++||.+++.+|+..+++.+... .+++|+|||||++|++
T Consensus 81 E~~~G~~eG~~~~e~~~~--~~~~~~~~~~~~~~~p~gEs~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~ 158 (204)
T TIGR03848 81 ECDYGDWTGRELKELAKE--PLWPVVQAHPSAAVFPGGESLAQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKS 158 (204)
T ss_pred cCCCCeeCCcCHHHHhCc--HHHHHHhcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHH
Confidence 999999999999998753 34666777777788899999999999999999988643 5678999999999999
Q ss_pred HHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEecCCCC
Q 022998 237 LICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTSH 280 (289)
Q Consensus 237 l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~h 280 (289)
+++.++|.+.+.++.+.++||++++|++++ +.+.+..+|+++|
T Consensus 159 ll~~~lg~~~~~~~~~~~~n~sit~l~~~~-~~~~~~~~n~~~~ 201 (204)
T TIGR03848 159 VLADALGMHLDLFQRIVVDPCSVSVVRYTP-LRPFVLRVNDTGG 201 (204)
T ss_pred HHHHHhCCCHHHhheeeeCCCeEEEEEEeC-CceEEEEeecccc
Confidence 999999999988888899999999999965 5688999999987
No 5
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.6e-42 Score=300.09 Aligned_cols=188 Identities=24% Similarity=0.398 Sum_probs=167.9
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCC---CCe
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPL 155 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~ 155 (289)
|++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|++ ..+|+|||||+.||+|||++|++..+ +++
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D-~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~ 79 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVD-VDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPE 79 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCc
Confidence 3689999999999999999999998 68999999999999999985 57999999999999999999987643 678
Q ss_pred EEeCCCccccccccCCCCHHHHHhhCchH-HHhhhcC------------------------CCCCCCCCCCCHHHHHHHH
Q 022998 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWRED------------------------PANFNVNGVYPVRNLWGTA 210 (289)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~------------------------~~~~~~~~~Es~~~~~~R~ 210 (289)
.++++|+|++||.|+|++..++.+.+|+. +..|..+ ...+.+|++||+.++.+|+
T Consensus 80 ~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv 159 (228)
T PRK14116 80 TKTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERV 159 (228)
T ss_pred ccCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHH
Confidence 88999999999999999999999999976 5666543 1134679999999999999
Q ss_pred HHHHHHHHc---CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCc
Q 022998 211 REAWKEILL---TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGE 269 (289)
Q Consensus 211 ~~~~~~l~~---~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~ 269 (289)
..++++++. .++++|+|||||++|++++++++|.+.+.++.+.++||+++.|++++++.
T Consensus 160 ~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (228)
T PRK14116 160 IPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMATGEPVVYDFDEKLN 221 (228)
T ss_pred HHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCCCCCeEEEEECCCCC
Confidence 999998763 35789999999999999999999999999899999999999999988654
No 6
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.9e-41 Score=293.52 Aligned_cols=186 Identities=25% Similarity=0.356 Sum_probs=165.6
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCC---CCCe
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPL 155 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~~~~ 155 (289)
|++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|+. ..++.|||||++||+|||+++++.. ++++
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D-~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~ 79 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWED-VNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPV 79 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCe
Confidence 3689999999999999999999999 68999999999999999984 5799999999999999999998754 3688
Q ss_pred EEeCCCccccccccCCCCHHHHHhhCchH-HHhhhcCCCC------------------------CCCCCCCCHHHHHHHH
Q 022998 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPAN------------------------FNVNGVYPVRNLWGTA 210 (289)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~------------------------~~~~~~Es~~~~~~R~ 210 (289)
.++++|+|++||.|+|++.+++.+.+|+. +..|..+... ..+|++||..++.+|+
T Consensus 80 ~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv 159 (228)
T PRK14119 80 YKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRV 159 (228)
T ss_pred eECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccCCCCCCHHHHHHHH
Confidence 89999999999999999999999999986 5566544211 2358999999999999
Q ss_pred HHHHHHHHcC---CCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecC
Q 022998 211 REAWKEILLT---PGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQN 267 (289)
Q Consensus 211 ~~~~~~l~~~---~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~ 267 (289)
..++++++.. ++++|+|||||++|++++++++|.+...++.+.++||++++++++++
T Consensus 160 ~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14119 160 IPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDD 219 (228)
T ss_pred HHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHhhcCCCCCceEEEEECCC
Confidence 9999998642 57899999999999999999999999888888999999999999765
No 7
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3e-41 Score=292.36 Aligned_cols=192 Identities=24% Similarity=0.356 Sum_probs=167.3
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHh---CCCCCe
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQ---GRDEPL 155 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~---~~~~~~ 155 (289)
|++||||||||+.+|..++++|+.| .|||+.|++||+.+++.|++ ..++.|||||+.||+|||++++. ..++++
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D-~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~ 79 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWAD-VDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPV 79 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCC-CCcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCc
Confidence 4789999999999999999999999 68999999999999999983 57999999999999999999864 345788
Q ss_pred EEeCCCccccccccCCCCHHHHHhhCchH-HHhhhcC------------------------CCCCCCCCCCCHHHHHHHH
Q 022998 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWRED------------------------PANFNVNGVYPVRNLWGTA 210 (289)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~------------------------~~~~~~~~~Es~~~~~~R~ 210 (289)
.+++.|+|++||.|+|++..++.+.+|+. +..|..+ .....+|++||..++.+|+
T Consensus 80 ~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv 159 (230)
T PRK14117 80 EKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVIPDAENLKVTLERA 159 (230)
T ss_pred eeCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999986 4556532 1234678999999999999
Q ss_pred HHHHHHHHc-C--CCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEE
Q 022998 211 REAWKEILL-T--PGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQ 273 (289)
Q Consensus 211 ~~~~~~l~~-~--~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~ 273 (289)
..++++++. . .+++|+|||||++|++++++++|.+....+.+.++||++++|++++++.....
T Consensus 160 ~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~~~~~~n~s~~~i~~~~~~~~~~~ 225 (230)
T PRK14117 160 LPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIPNFPPLVFEFDEKLNVVKE 225 (230)
T ss_pred HHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHhhcCCCCceEEEEEECCCCceeec
Confidence 999999762 2 46789999999999999999999998888888999999999999766444433
No 8
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=1.2e-40 Score=308.20 Aligned_cols=203 Identities=27% Similarity=0.372 Sum_probs=188.4
Q ss_pred cCCCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhcc-CCCEEEECChHHHHHHHHHHHhCCCCCeE
Q 022998 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI-YFDQCFSSPICRAKSTAEILWQGRDEPLA 156 (289)
Q Consensus 78 ~~~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~-~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~ 156 (289)
...+++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|+.. .++.|||||+.||+|||+++++.+++++.
T Consensus 168 ~~~~~~i~LvRHGet~~n~~~~~~g~~D-~~Lt~~G~~QA~~l~~~l~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~ 246 (372)
T PRK07238 168 RGTPTRLLLLRHGQTELSVQRRYSGRGN-PELTEVGRRQAAAAARYLAARGGIDAVVSSPLQRARDTAAAAAKALGLDVT 246 (372)
T ss_pred CCCceEEEEEeCCCCCcccCCeeeCCCC-CCcCHHHHHHHHHHHHHHhccCCCCEEEECChHHHHHHHHHHHHhcCCCcE
Confidence 3456899999999999999999999988 789999999999999999976 89999999999999999999999999999
Q ss_pred EeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHHHHH
Q 022998 157 FIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILL-TPGENFLVVTHKSILR 235 (289)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~-~~~~~vlvVsHg~~i~ 235 (289)
+++.|+|+++|.|+|++..++.+.+|+.+..|..++ .+.+|++||..++.+|+..+++++.. ..+++|+|||||++|+
T Consensus 247 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~-~~~~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir 325 (372)
T PRK07238 247 VDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADT-SVAPPGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIK 325 (372)
T ss_pred ECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCC-CCCCcCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHH
Confidence 999999999999999999999999999988898776 56789999999999999999999976 4668999999999999
Q ss_pred HHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEecCCCCCC
Q 022998 236 ALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTSHMY 282 (289)
Q Consensus 236 ~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~hL~ 282 (289)
+++++++|.+...++.+.++||+++++++..+|.+.+..+|+++||.
T Consensus 326 ~ll~~~l~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~n~~~hl~ 372 (372)
T PRK07238 326 TLLRLALDAGPGVLYRLHLDLASLSIAEFYPDGPASVRLVNDTSHLR 372 (372)
T ss_pred HHHHHHhCCCHHHhhhcccCCceEEEEEEECCCceEEEEecCCCCCC
Confidence 99999999998888888899999999999877788899999999984
No 9
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=4.7e-41 Score=285.79 Aligned_cols=192 Identities=26% Similarity=0.325 Sum_probs=170.2
Q ss_pred CCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCC--EEEECChHHHHHHHHHHHhCCCCCe-E
Q 022998 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFD--QCFSSPICRAKSTAEILWQGRDEPL-A 156 (289)
Q Consensus 80 ~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~--~i~sSpl~Ra~qTA~~i~~~~~~~~-~ 156 (289)
++++||||||||+.+|..++++|+.| .|||+.|++||+.+++.|+...++ .|||||+.||+|||+++ +.++ .
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~G~~d-~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i----~~~~~~ 78 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHTGRTE-LELTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLA----GLTVDE 78 (203)
T ss_pred cccEEEEEeCCCCCcccCCCccCCCC-CCCCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHh----cCcccc
Confidence 46889999999999999999999998 689999999999999999977777 79999999999999988 2333 6
Q ss_pred EeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHH
Q 022998 157 FIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILR 235 (289)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~ 235 (289)
+++.|+|++||.|+|++..++.+.+|+. ..|. ..+|++||++++.+|+..+++.+... ++++|+|||||++|+
T Consensus 79 ~~~~LrE~~~G~~eG~~~~ei~~~~~~~-~~~~-----~~~p~gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir 152 (203)
T PRK13462 79 VSGLLAEWDYGSYEGLTTPQIRESEPDW-LVWT-----HGCPGGESVAQVNERADRAVALALEHMESRDVVFVSHGHFSR 152 (203)
T ss_pred cCccccccCCccccCCcHHHHHHhCchH-Hhhc-----CCCCCCccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 7899999999999999999999998863 3343 23479999999999999999998764 667899999999999
Q ss_pred HHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEecCCCCCCC
Q 022998 236 ALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTSHMYS 283 (289)
Q Consensus 236 ~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~hL~~ 283 (289)
++++++++.+...++.+.++||++++++++. +.+.+..+|+++|+-+
T Consensus 153 ~ll~~~l~~~~~~~~~~~~~~~s~s~~~~~~-~~~~~~~~~~~~~~~~ 199 (203)
T PRK13462 153 AVITRWVELPLAEGSRFAMPTASIAICGFEH-GVRQLSALGLTGHPQP 199 (203)
T ss_pred HHHHHHhCCCHHHhhhcccCCceEEEEEeeC-CceEEEeeccCCCCcc
Confidence 9999999999888888899999999999964 5788999999988754
No 10
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.9e-41 Score=290.85 Aligned_cols=187 Identities=20% Similarity=0.267 Sum_probs=168.9
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCCEEEECChHHHHHHHHHHHhC----------
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQG---------- 150 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~---------- 150 (289)
|++||||||||+.+|..+.++|+.| .|||+.|++||+.++++|++..++.|||||+.||+|||+.+++.
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D-~~Lte~G~~Qa~~l~~~L~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVD-IPLSQQGIAEAIAAGEKIKDLPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIV 79 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCC-CCcCHHHHHHHHHHHHHhhcCCCCEEEEcCcHHHHHHHHHHHHhhccccccccc
Confidence 4789999999999999999999998 68999999999999999999999999999999999999999852
Q ss_pred -------------------CCCCeEEeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHH
Q 022998 151 -------------------RDEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAR 211 (289)
Q Consensus 151 -------------------~~~~~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~ 211 (289)
..+++..++.|+|+++|.|+|++..++.+.+|+.+..|+.++..+.+|++||+.++.+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~GES~~d~~~Rv~ 159 (228)
T PRK01112 80 HEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPPQGESLEDTGQRTL 159 (228)
T ss_pred ccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCCCCCCHHHHHHHHH
Confidence 2357888999999999999999999999999987666556666788999999999999999
Q ss_pred HHHHHHH-c--CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCC
Q 022998 212 EAWKEIL-L--TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNG 268 (289)
Q Consensus 212 ~~~~~l~-~--~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g 268 (289)
.+++.++ . ..+++|+|||||++|+++++.+++.+.+.+..+.++||++++++++.++
T Consensus 160 ~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK01112 160 PYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPIVYEWTGQK 219 (228)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhcccCCcceEEEEECCCC
Confidence 9999764 2 2578999999999999999999999999889999999999999997543
No 11
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=4.9e-41 Score=279.91 Aligned_cols=176 Identities=32% Similarity=0.479 Sum_probs=164.9
Q ss_pred EEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhccCCCEEEECChHHHHHHHHHHHhCCCCCeEEeCCCcc
Q 022998 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSLKE 163 (289)
Q Consensus 84 i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E 163 (289)
||||||||+.+|..+.+ |+.| +|||+.|++||+.+++.|+...++.|||||+.||+|||+++++.+++++.+++.|+|
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d-~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E 78 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTD-VPLAEKGAEQAAALREKLADVPFDAVYSSPLSRCRELAEILAERRGLPIIKDPRLRE 78 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCC-CCcChhHHHHHHHHHHHhcCCCCCEEEECchHHHHHHHHHHHhhcCCCceECCcccc
Confidence 68999999999999888 8887 789999999999999999988999999999999999999999988999999999999
Q ss_pred ccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHHHh
Q 022998 164 AHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRALICTAL 242 (289)
Q Consensus 164 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l~~~l~ 242 (289)
+++|.|+|++..++.+.+| .+..|..++..+.+|++||..++.+|+..+++++... ++++|+|||||++|++++++++
T Consensus 79 ~~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~~~ 157 (177)
T TIGR03162 79 MDFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPPGGESFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAHLL 157 (177)
T ss_pred ccCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHh
Confidence 9999999999999999988 5777888877788999999999999999999999875 6789999999999999999999
Q ss_pred CCCCCCcccccccCceEEEE
Q 022998 243 GLGPERFRAIDVNNGGITVF 262 (289)
Q Consensus 243 g~~~~~~~~~~~~n~si~~l 262 (289)
|.+++.++.+.++||+++++
T Consensus 158 ~~~~~~~~~~~~~n~~i~~l 177 (177)
T TIGR03162 158 GLPLEQWWSFDVEYGSITLI 177 (177)
T ss_pred CCCHHHHhccccCCeeEEeC
Confidence 99999888899999999874
No 12
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.1e-40 Score=288.26 Aligned_cols=185 Identities=25% Similarity=0.391 Sum_probs=163.8
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCC---CCCeE
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPLA 156 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~~~~~ 156 (289)
|+||||||||+.+|..++++|+.| .|||+.|++||+.+++.|++ ..++.|||||+.||+|||++|++.. ++++.
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d-~~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 79 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRD-VNLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQV 79 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCee
Confidence 479999999999999999999998 68999999999999999985 5799999999999999999998754 36788
Q ss_pred EeCCCccccccccCCCCHHHHHhhCchH-HHhhhcCCC------------------------CCCCCCCCCHHHHHHHHH
Q 022998 157 FIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPA------------------------NFNVNGVYPVRNLWGTAR 211 (289)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~------------------------~~~~~~~Es~~~~~~R~~ 211 (289)
++++|+|++||.|||++.+++.+.+|+. +..|..+.. ...+|++||..++.+|+.
T Consensus 80 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~ 159 (227)
T PRK14118 80 KNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVL 159 (227)
T ss_pred cCCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999976 455544311 134689999999999999
Q ss_pred HHHHHHHc---CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecC
Q 022998 212 EAWKEILL---TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQN 267 (289)
Q Consensus 212 ~~~~~l~~---~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~ 267 (289)
++++.++. .++++|+|||||++|++++++++|.+...++.+.++||+++.|+++++
T Consensus 160 ~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~~i~~~s~~~~~~~~~ 218 (227)
T PRK14118 160 PFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDN 218 (227)
T ss_pred HHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcccCCCCceEEEEECCC
Confidence 99998764 257899999999999999999999999888888999999999999764
No 13
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.8e-40 Score=282.90 Aligned_cols=188 Identities=28% Similarity=0.395 Sum_probs=165.3
Q ss_pred CCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCC---CC
Q 022998 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EP 154 (289)
Q Consensus 80 ~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~ 154 (289)
++++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|++ ..+|+|||||+.||+|||++|++.++ ++
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G~~d-~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 79 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTGWRD-PDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLE 79 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCCCCC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCC
Confidence 35789999999999999999999988 68999999999999999983 57999999999999999999998875 78
Q ss_pred eEEeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHH-HHHHc--CCCCeEEEEeCH
Q 022998 155 LAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAW-KEILL--TPGENFLVVTHK 231 (289)
Q Consensus 155 ~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~-~~l~~--~~~~~vlvVsHg 231 (289)
+.+++.|+|+++|.|+|++.+++.+.+|+....++..+..+.+|++||+.++.+|+..++ +.+.. ..+++|+|||||
T Consensus 80 ~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg 159 (206)
T PRK01295 80 TIRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVLPYYLQEILPRVLRGERVLVAAHG 159 (206)
T ss_pred eEECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCcCCCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcCh
Confidence 999999999999999999999999999976555445555788899999999999999975 55654 257899999999
Q ss_pred HHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCC
Q 022998 232 SILRALICTALGLGPERFRAIDVNNGGITVFIFNQNG 268 (289)
Q Consensus 232 ~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g 268 (289)
++|+++++++++.+.+.++.+.+.||+..++.++..+
T Consensus 160 ~~ir~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (206)
T PRK01295 160 NSLRALVMVLDGLTPEQILKLELATGVPIVYRLNADS 196 (206)
T ss_pred HHHHHHHHHHhCCCHHHHhhcCCCCCCcEEEEecCCC
Confidence 9999999999999998888888888877777776543
No 14
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.5e-40 Score=287.35 Aligned_cols=190 Identities=23% Similarity=0.333 Sum_probs=166.9
Q ss_pred CCCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCC---CC
Q 022998 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DE 153 (289)
Q Consensus 79 ~~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~~ 153 (289)
.++++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|+. ..++.|||||+.||+|||+++++.. ++
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~D-~pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~ 80 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWVD-VDLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWI 80 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCC
Confidence 456899999999999999999999988 68999999999999999984 4689999999999999999997643 46
Q ss_pred CeEEeCCCccccccccCCCCHHHHHhhCchH-HHhhhcCCCCC----------------------CCCCCCCHHHHHHHH
Q 022998 154 PLAFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPANF----------------------NVNGVYPVRNLWGTA 210 (289)
Q Consensus 154 ~~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~~----------------------~~~~~Es~~~~~~R~ 210 (289)
++.+++.|+|++||.|+|++..++.+.+|+. +..|..+.... .+|++||+.++.+|+
T Consensus 81 ~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv 160 (249)
T PRK14120 81 PVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPRTECLKDVVARF 160 (249)
T ss_pred CeEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCCCCCCHHHHHHHH
Confidence 8889999999999999999999999999974 77776543221 148999999999999
Q ss_pred HHHHHHHH-c--CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCc
Q 022998 211 REAWKEIL-L--TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGE 269 (289)
Q Consensus 211 ~~~~~~l~-~--~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~ 269 (289)
..++++++ . .++++|||||||++|+++++++++.+.+..+.+.++||+++.|++++++.
T Consensus 161 ~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 222 (249)
T PRK14120 161 LPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGLNIPTGIPLVYELDEDFK 222 (249)
T ss_pred HHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhheeccCCCceEEEEECCCCc
Confidence 99999853 2 36688999999999999999999999999999999999999999976543
No 15
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=6e-40 Score=280.35 Aligned_cols=187 Identities=36% Similarity=0.513 Sum_probs=175.7
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhh--ccCCCEEEECChHHHHHHHHHHHhCCCCCeEEe
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRDEPLAFI 158 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 158 (289)
+++||||||||+.+|..+.++|+.| .|||+.|++||+.+++.|. +..++.||+||+.||+|||+++++.++.++.++
T Consensus 2 ~~~i~lvRHGqt~~n~~~~~~G~~d-~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~~~~~~ 80 (208)
T COG0406 2 MMRLYLVRHGETEWNVEGRLQGWTD-SPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELGLPLEVD 80 (208)
T ss_pred ceEEEEEecCCccccccccccCCCC-CCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcCCCceec
Confidence 5789999999999999999999777 7899999999999999999 678999999999999999999999999999999
Q ss_pred CCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHH
Q 022998 159 DSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRAL 237 (289)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l 237 (289)
+.|+|+++|.|+|++..++.+.+|..+..|..++..+.++++|+..++.+|+..++.++... .+++|+|||||++|+++
T Consensus 81 ~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~~gEs~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~l 160 (208)
T COG0406 81 DRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPPGGESLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRAL 160 (208)
T ss_pred CCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999874 44479999999999999
Q ss_pred HHHHhCCCCCCcccccccCceEEEEEEecCC
Q 022998 238 ICTALGLGPERFRAIDVNNGGITVFIFNQNG 268 (289)
Q Consensus 238 ~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g 268 (289)
+++++|.+....+.+.++|++++.+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~si~~l~~~~~~ 191 (208)
T COG0406 161 LAYLLGLDLEELWRLRLDNASVTVLEFDDGR 191 (208)
T ss_pred HHHhcCCChhhHHhcCCCCceEEEEEeeCCC
Confidence 9999998887677888999999999998764
No 16
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=6.3e-40 Score=286.11 Aligned_cols=193 Identities=25% Similarity=0.394 Sum_probs=169.0
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCC---CCeE
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLA 156 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~ 156 (289)
|+||||||||+.+|..++++|+.| .|||+.|++||+.++++|+. ..+++|||||++||+|||++++..++ +++.
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D-~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~ 79 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVD-VKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVK 79 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCee
Confidence 469999999999999999999988 68999999999999999984 46899999999999999999998776 6788
Q ss_pred EeCCCccccccccCCCCHHHHHhhCchH-HHhhhcCCC------------------CC------CCCCCCCHHHHHHHHH
Q 022998 157 FIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPA------------------NF------NVNGVYPVRNLWGTAR 211 (289)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~------------------~~------~~~~~Es~~~~~~R~~ 211 (289)
+++.|+|+++|.|+|++.+++.+.+|+. +..|..... .| .+|++||+.++.+|+.
T Consensus 80 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~ 159 (245)
T TIGR01258 80 KSWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLPLTESLKDTIARVL 159 (245)
T ss_pred eCcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999975 555654311 11 2689999999999999
Q ss_pred HHHHHHHc---CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEe
Q 022998 212 EAWKEILL---TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSL 275 (289)
Q Consensus 212 ~~~~~l~~---~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~ 275 (289)
.++++++. .++++|+|||||++|+++++++++.+....+.+.++||++++++++++......+|
T Consensus 160 ~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (245)
T TIGR01258 160 PYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEILELNIPTGIPLVYELDENLKPIKHYY 226 (245)
T ss_pred HHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHhheecCCCceEEEEECCCCCEeeeee
Confidence 99999863 25679999999999999999999999998888899999999999987766655554
No 17
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.4e-39 Score=282.82 Aligned_cols=188 Identities=27% Similarity=0.414 Sum_probs=165.9
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCC---CCeE
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLA 156 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~ 156 (289)
|+||||||||+.+|..++++|+.| .|||+.|++||+.+++.|+. ..+++|||||+.||+|||++|++.++ +++.
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D-~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~ 79 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTD-VDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVE 79 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCce
Confidence 579999999999999999999998 68999999999999999984 47899999999999999999988776 4788
Q ss_pred EeCCCccccccccCCCCHHHHHhhCchH-HHhhhcCCC------------------------CCCCCCCCCHHHHHHHHH
Q 022998 157 FIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPA------------------------NFNVNGVYPVRNLWGTAR 211 (289)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~------------------------~~~~~~~Es~~~~~~R~~ 211 (289)
+++.|+|++||.|+|++..++.+.+|+. +..|..... ...+|++||+.++..|+.
T Consensus 80 ~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~ 159 (247)
T PRK14115 80 KSWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELPLTESLKDTIARVL 159 (247)
T ss_pred ECccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999875 555654211 134789999999999999
Q ss_pred HHHHHHHc---CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcE
Q 022998 212 EAWKEILL---TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEA 270 (289)
Q Consensus 212 ~~~~~l~~---~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~ 270 (289)
.+++.++. .++++|+|||||++|+++++++++.+....+.+.++||+++.|+++.+...
T Consensus 160 ~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 221 (247)
T PRK14115 160 PYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEILELNIPTGVPLVYELDENLKP 221 (247)
T ss_pred HHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhheeecCCCceEEEEECCCCcE
Confidence 99998753 357899999999999999999999999888899999999999999876543
No 18
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=100.00 E-value=4.4e-35 Score=288.54 Aligned_cols=193 Identities=19% Similarity=0.154 Sum_probs=171.3
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhcc---CCCEEEECChHHHHHHHHHHHhC-------
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI---YFDQCFSSPICRAKSTAEILWQG------- 150 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~---~~~~i~sSpl~Ra~qTA~~i~~~------- 150 (289)
+++||||||||+.+|..++++| | +|||+.|++||+.++++|++. .++.|||||+.||+|||+++.+.
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~G--d-~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~ 495 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIGG--N-SRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQST 495 (664)
T ss_pred CceEEEEecccchhhhcCccCC--C-CccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhcccccccc
Confidence 5789999999999999999998 5 689999999999999999853 46799999999999999999753
Q ss_pred ----------CCCCeEEeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHH-HHHHHHHHHHHc
Q 022998 151 ----------RDEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLW-GTAREAWKEILL 219 (289)
Q Consensus 151 ----------~~~~~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~-~R~~~~~~~l~~ 219 (289)
+++++..++.|+|++||.|||++.+++.+.+|+.+..|..++..+.+|+|||..++. +|+..++.++..
T Consensus 496 ~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P~GES~~d~~~~R~~~~i~~l~~ 575 (664)
T PTZ00322 496 ASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWPNGECIHQVFNARLEPHIHDIQA 575 (664)
T ss_pred ccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCCCCcCHHHHHHHHHHHHHHHHHc
Confidence 466788899999999999999999999999999999999999999999999999966 799999999854
Q ss_pred CCCCeEEEEeCHHHHHHHHHHHhCC-----CCCCcccccccCceEEEEEEecCCcEEEEEecCCCCCC
Q 022998 220 TPGENFLVVTHKSILRALICTALGL-----GPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTSHMY 282 (289)
Q Consensus 220 ~~~~~vlvVsHg~~i~~l~~~l~g~-----~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~hL~ 282 (289)
..++|+|||||++|+++++++++. ++...+.+.+++++++.|++.+. ...|+..||.
T Consensus 576 -~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~-----~~~~~~~~l~ 637 (664)
T PTZ00322 576 -STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRMVGF-----NRVAELIDLS 637 (664)
T ss_pred -cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEEecc-----CceEEEEech
Confidence 347899999999999999999985 67777888899999999998753 4566667765
No 19
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=100.00 E-value=5.4e-35 Score=237.95 Aligned_cols=154 Identities=34% Similarity=0.536 Sum_probs=142.7
Q ss_pred EEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhh--ccCCCEEEECChHHHHHHHHHHHhCCCCCeEEeCC
Q 022998 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (289)
Q Consensus 83 ~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 160 (289)
+||||||||+.+|..+.++++.| +|||+.|++||+.+++.|+ ...++.|||||+.||+|||+++++.++.++.+++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d-~~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~~~~~~~~ 79 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSD-PPLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLGIEIIVDPR 79 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSS-TGBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHTSEEEEEGG
T ss_pred CEEEEECCccccccCCCcCCCCC-ccccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcccccccccccc
Confidence 59999999999999999999988 5899999999999999999 78999999999999999999999988899999999
Q ss_pred CccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHH--cCCCCeEEEEeCHHHHHHH
Q 022998 161 LKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEIL--LTPGENFLVVTHKSILRAL 237 (289)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~--~~~~~~vlvVsHg~~i~~l 237 (289)
|+|+++|.|+|++..++.+.++..+..|......+.+|++||..++..|+..+++.+. ..++++|+|||||++|++|
T Consensus 80 l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 80 LREIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPPGGESWEDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp GSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGSTTSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred cccccchhhcccchhhHHhhhhcccchhhccccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 9999999999999999999999888889888888899999999999999999999999 4688999999999999975
No 20
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.6e-33 Score=251.80 Aligned_cols=181 Identities=25% Similarity=0.319 Sum_probs=147.4
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCC--CCCCHHHHHHHHHHHHHhhcc--------CCCEEEECChHHHHHHHHHHHhC
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNL--SVLTEAGVRQAERCRKALRNI--------YFDQCFSSPICRAKSTAEILWQG 150 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~--~pLT~~G~~QA~~l~~~l~~~--------~~~~i~sSpl~Ra~qTA~~i~~~ 150 (289)
.++||||||||+..+ +..|+ .+||+.|++||+.++++|++. .+++|||||+.||+|||++|++.
T Consensus 102 ~~~L~LVRHGq~~~~------~~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~ 175 (299)
T PTZ00122 102 QRQIILVRHGQYINE------SSNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEA 175 (299)
T ss_pred eeEEEEEECCCCCCC------CCCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHh
Confidence 389999999996443 23442 359999999999999999974 89999999999999999999987
Q ss_pred C-CCCeEEeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC----CCCeE
Q 022998 151 R-DEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT----PGENF 225 (289)
Q Consensus 151 ~-~~~~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~----~~~~v 225 (289)
+ ++++.++++|+|. ++..+. | ....+.++++|+ .+..+|+.+++++++.+ .++++
T Consensus 176 ~~~~~v~~d~~LrEG-------~~~~~~----~--------~~~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~v 235 (299)
T PTZ00122 176 FPGVRLIEDPNLAEG-------VPCAPD----P--------PSRGFKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVE 235 (299)
T ss_pred CCCCCceeCcccccC-------CccccC----c--------cccccCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeE
Confidence 7 5889999999993 211100 1 012234455555 66799999999999753 24568
Q ss_pred EEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEecCCCCCCCCccc
Q 022998 226 LVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTSHMYSDYMY 287 (289)
Q Consensus 226 lvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~hL~~~~~~ 287 (289)
||||||++|+++++.+++.+.+.++.+.++||+++.+++.++|.+.+..+|+.+||++++|-
T Consensus 236 LVVsHGgvIR~ll~~lLglp~~~~~~~~~~N~sit~l~~~~~g~~~l~~~n~~~HL~~~~~t 297 (299)
T PTZ00122 236 IIVCHGNVIRYLVCRALQLPPEAWLRLSLYNCGITWIVISSEGHVSLSGFGSVGHLPPDMVT 297 (299)
T ss_pred EEEeCChHHHHHHHHHhCcCHHHHhhccCCCceEEEEEEeCCCcEEEEEEeCCCCCChhhcc
Confidence 99999999999999999999888888889999999999987788999999999999999874
No 21
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=242.59 Aligned_cols=173 Identities=25% Similarity=0.373 Sum_probs=150.8
Q ss_pred CccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCC---CCeEEeCCCccccccc
Q 022998 94 WNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLAFIDSLKEAHLFF 168 (289)
Q Consensus 94 ~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~~~~~~~L~E~~~g~ 168 (289)
+|..++++|+.| .|||+.|++||+.+++.|+. ..++.|||||+.||+|||+++++.++ +++.+++.|+|+++|.
T Consensus 1 ~N~~~~~qG~~D-~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~ 79 (236)
T PTZ00123 1 WNKENRFTGWTD-VPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGA 79 (236)
T ss_pred CcccCceeCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhccccc
Confidence 578899999998 78999999999999999973 67999999999999999999998765 5788899999999999
Q ss_pred cCCCCHHHHHhhCchHH-HhhhcCCC------------------------CCCCCCCCCHHHHHHHHHHHHHHHHc---C
Q 022998 169 LEGMKNVDARQKYPNEY-TTWREDPA------------------------NFNVNGVYPVRNLWGTAREAWKEILL---T 220 (289)
Q Consensus 169 ~~g~~~~~~~~~~~~~~-~~~~~~~~------------------------~~~~~~~Es~~~~~~R~~~~~~~l~~---~ 220 (289)
|+|++..++.+.+|+.+ ..|..+.. .+.+|++||+.++.+|+..++++++. .
T Consensus 80 ~EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~ 159 (236)
T PTZ00123 80 LQGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERVLPYWEDHIAPDIL 159 (236)
T ss_pred ccCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999863 33432211 12457899999999999999998753 3
Q ss_pred CCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecC
Q 022998 221 PGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQN 267 (289)
Q Consensus 221 ~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~ 267 (289)
.+++|||||||++|+++++++++.+...++.+.++||++++|+++++
T Consensus 160 ~~~~vliVsHG~vir~ll~~l~~~~~~~~~~~~~~n~~~~~~~~~~~ 206 (236)
T PTZ00123 160 AGKKVLVAAHGNSLRALVKYLDKMSEEDILELNIPTGVPLVYELDEN 206 (236)
T ss_pred CCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCceEEEEECCC
Confidence 57899999999999999999999999888888999999999999765
No 22
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=235.30 Aligned_cols=188 Identities=29% Similarity=0.467 Sum_probs=167.5
Q ss_pred CCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCC---CC
Q 022998 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EP 154 (289)
Q Consensus 80 ~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~---~~ 154 (289)
...+++||||||++||.++.++|+.|+ +||+.|.+||+.++++|.+ +.++.+|||++.||+|||+.|.+..+ +|
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~~D~-~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~p 82 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGWIDA-PLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKVP 82 (214)
T ss_pred cceEEEEEecCchhhhhhCcccccccC-ccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCcc
Confidence 357899999999999999999999995 8999999999999999994 56888899999999999999999887 78
Q ss_pred eEEeCCCccccccccCCCCHHHHHhhCchH--HHhhhcCC-CCCCCCCCCCHHHHHHHHHHHHHHHHc---CCCCeEEEE
Q 022998 155 LAFIDSLKEAHLFFLEGMKNVDARQKYPNE--YTTWREDP-ANFNVNGVYPVRNLWGTAREAWKEILL---TPGENFLVV 228 (289)
Q Consensus 155 ~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~Es~~~~~~R~~~~~~~l~~---~~~~~vlvV 228 (289)
+...+.|+|++||.++|+...++.+.+++. ...+.... ..-.+|.+||..++.+|+..+++..+. ..+++|+||
T Consensus 83 v~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~ 162 (214)
T KOG0235|consen 83 VLYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAKESKEGKNVLIV 162 (214)
T ss_pred eEechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEE
Confidence 999999999999999999999999999976 34444443 223467899999999999999998774 478999999
Q ss_pred eCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCC
Q 022998 229 THKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNG 268 (289)
Q Consensus 229 sHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g 268 (289)
+||+.+|+++.++.|...+....+.++++-...++++.+.
T Consensus 163 aHGnsLR~i~~~l~g~s~~~i~~~~~~t~vp~v~~ld~~~ 202 (214)
T KOG0235|consen 163 AHGNSLRAIVKHLEGISDEAIKELNLPTGVPIVYELDKNK 202 (214)
T ss_pred cCcHHHHHHHHHHhcCCHhhhhheecccCCceEEEccccc
Confidence 9999999999999999999888889999999999887653
No 23
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=100.00 E-value=3.5e-33 Score=227.71 Aligned_cols=149 Identities=32% Similarity=0.421 Sum_probs=131.6
Q ss_pred EEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc---cCCCEEEECChHHHHHHHHHHHhCCCCCeEEeC
Q 022998 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN---IYFDQCFSSPICRAKSTAEILWQGRDEPLAFID 159 (289)
Q Consensus 83 ~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 159 (289)
+||||||||+.+|..+.+.|..| .|||+.|++||+.+++.|+. ..++.|||||+.||+|||+++++.++.++ +++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d-~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~-~~~ 78 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTD-SPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGLGE-VDP 78 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCC-CCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCCCC-CCh
Confidence 48999999999998888888855 78999999999999999985 58999999999999999999999887664 889
Q ss_pred CCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC---CCCeEEEEeCHHHHHH
Q 022998 160 SLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT---PGENFLVVTHKSILRA 236 (289)
Q Consensus 160 ~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~---~~~~vlvVsHg~~i~~ 236 (289)
.|+|+++|.|+|++..++...+|..+..| ..+.+|++|+..++..|+.++++.+... .+++|+|||||++|++
T Consensus 79 ~L~E~~~G~~~g~~~~~~~~~~~~~~~~~----~~~~~~~gEs~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~ 154 (155)
T smart00855 79 RLRERDYGAWEGLTKEEERAKAWTRPADW----LGAAPPGGESLADVVERLVRALEELIATHDKSGQNVLIVSHGGVIRA 154 (155)
T ss_pred hhhhcccceecCCcHHHHHHHHHHHHhcc----CCCCCcCCCCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCccccc
Confidence 99999999999999999988877654443 4567889999999999999999999754 5788999999999986
Q ss_pred H
Q 022998 237 L 237 (289)
Q Consensus 237 l 237 (289)
+
T Consensus 155 ~ 155 (155)
T smart00855 155 L 155 (155)
T ss_pred C
Confidence 3
No 24
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.98 E-value=6e-32 Score=222.80 Aligned_cols=188 Identities=27% Similarity=0.401 Sum_probs=168.2
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCC---CCCe
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPL 155 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~---~~~~ 155 (289)
+++++|+||||++||..+.+.||.| .+||++|++||...|+.|++ ..||.+|||-+.||++|++++.+.. .+|+
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~D-v~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv 79 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVD-VDLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPV 79 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeee-cCcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcch
Confidence 4679999999999999999999999 58999999999999999995 8899999999999999999998876 6788
Q ss_pred EEeCCCccccccccCCCCHHHHHhhCchH-HHhhhcCCCCCCCC-------------------------CCCCHHHHHHH
Q 022998 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNE-YTTWREDPANFNVN-------------------------GVYPVRNLWGT 209 (289)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------------------~~Es~~~~~~R 209 (289)
....+|+|.+||.++|++..+..++|.+. +..|...- ...|| ..|+..+..+|
T Consensus 80 ~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsy-di~PP~~~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~R 158 (230)
T COG0588 80 IKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSY-DIPPPKLEKDDERSPHRDRRYAHLDIGGLPLTESLKDTVER 158 (230)
T ss_pred hhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhc-CCCCCCcccccccccccccccccccccCCCccchHHHHHHH
Confidence 89999999999999999999999999876 56665432 22222 34999999999
Q ss_pred HHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcE
Q 022998 210 AREAWKEILL---TPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEA 270 (289)
Q Consensus 210 ~~~~~~~l~~---~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~ 270 (289)
+..+++..+. ..+++|+||+||+.+|+++.++.|++.+.+..+.+++|--.+++++++...
T Consensus 159 v~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~l~IPtg~Plvyeld~~l~~ 222 (230)
T COG0588 159 VLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDILDLNIPTGIPLVYELDKNLKV 222 (230)
T ss_pred hhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhhhcccCCCCcEEEEECCCCcC
Confidence 9999988775 489999999999999999999999999999999999999999999887544
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.96 E-value=2.1e-28 Score=198.74 Aligned_cols=141 Identities=40% Similarity=0.632 Sum_probs=125.3
Q ss_pred EEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhcc--CCCEEEECChHHHHHHHHHHHhCC-CCCeEEeC
Q 022998 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRAKSTAEILWQGR-DEPLAFID 159 (289)
Q Consensus 83 ~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~--~~~~i~sSpl~Ra~qTA~~i~~~~-~~~~~~~~ 159 (289)
+|||||||++.+|......+..| +|||+.|++||+.+++.|... .++.|||||+.||+|||+++++.+ +.++..++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d-~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~~~~~~~ 79 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTD-VPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELPGLPVEVDP 79 (153)
T ss_pred CEEEEECCCCcccccCcccCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcCCCCceeCc
Confidence 48999999999988776667777 789999999999999999965 899999999999999999999987 77888888
Q ss_pred CCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHH
Q 022998 160 SLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRALI 238 (289)
Q Consensus 160 ~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l~ 238 (289)
.|+| .|+.++++.+... .+++|+||||+++|+.++
T Consensus 80 ~L~e--------------------------------------------~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~ 115 (153)
T cd07067 80 RLRE--------------------------------------------ARVLPALEELIAPHDGKNVLIVSHGGVLRALL 115 (153)
T ss_pred cchH--------------------------------------------HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHH
Confidence 8887 6888888888764 678999999999999999
Q ss_pred HHHhCCCCCCcccccccCceEEEEEEecCC
Q 022998 239 CTALGLGPERFRAIDVNNGGITVFIFNQNG 268 (289)
Q Consensus 239 ~~l~g~~~~~~~~~~~~n~si~~l~~~~~g 268 (289)
+++++.+....+.+.++||+++++++++++
T Consensus 116 ~~l~~~~~~~~~~~~~~~~s~~~~~~~~~~ 145 (153)
T cd07067 116 AYLLGLSDEDILRLNLPNGSISVLELDENG 145 (153)
T ss_pred HHHhCCCHHHHHhcCCCCceEEEEEEeCCC
Confidence 999998887777788999999999997653
No 26
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.93 E-value=4.2e-25 Score=181.61 Aligned_cols=180 Identities=25% Similarity=0.328 Sum_probs=139.7
Q ss_pred CCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhh--ccCCCEEEECChHHHHHHHHHHHhCCC--CCe
Q 022998 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD--EPL 155 (289)
Q Consensus 80 ~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~~~~--~~~ 155 (289)
....|+||||||.-. . |..+ .||+.|++||+.+|++|+ ++++|.|..|.|.||.|||.+|.++++ +..
T Consensus 93 atRhI~LiRHgeY~~--~----g~~~--hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~lk~ 164 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHV--D----GSLE--HLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDLKR 164 (284)
T ss_pred hhceEEEEeccceec--c----Cchh--hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCccce
Confidence 467899999999632 2 2333 699999999999999999 578999999999999999999999985 445
Q ss_pred EEeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHc------CCCCeEEEEe
Q 022998 156 AFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILL------TPGENFLVVT 229 (289)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~------~~~~~vlvVs 229 (289)
+..+.|+|-. .+++.+. ...|...+. .+..-..|+..++..++. +.+...+||+
T Consensus 165 ~s~~ll~EGa--P~ppdPp----------~k~wrp~~~--------qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~ 224 (284)
T KOG4609|consen 165 VSCPLLREGA--PYPPDPP----------VKHWRPLDP--------QYYRDGARIEAAFRRYFHRASPSQEEDSYELIVC 224 (284)
T ss_pred ecccccccCC--CCCCCCC----------cccCCccCh--------HhhhcchHHHHHHHHHHhhcCcccccccEEEEEe
Confidence 5667777631 0111100 011111111 111223688888888883 2455689999
Q ss_pred CHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEecCCCCCCCCccc
Q 022998 230 HKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLNMTSHMYSDYMY 287 (289)
Q Consensus 230 Hg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n~~~hL~~~~~~ 287 (289)
|+++||.++|+.+..|++.|.++++.||||+++.+.+.|.+++.++++.+|||...|.
T Consensus 225 HaNVIRY~icRALq~PpegWlR~nlnh~SiTWlti~PsG~vsvr~lGdsGfmP~~~it 282 (284)
T KOG4609|consen 225 HANVIRYFICRALQFPPEGWLRMNLNHCSITWLTISPSGHVSVRSLGDSGFMPPNKIT 282 (284)
T ss_pred ecchhhhhhhhhhcCCcchhheecccCcceEEEEEccCCcEEEEeccccCCCChhhhc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 27
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.1e-24 Score=179.00 Aligned_cols=189 Identities=21% Similarity=0.182 Sum_probs=141.7
Q ss_pred ccccCCCcEEEEEcCCCCCCccCCCee-------CCCCCCCCCHHHHHHHHHHHHHhh--cc--CCCEEEECChHHHHHH
Q 022998 75 QKLISYPKKVTLVRHGLSSWNDEGRVQ-------GSSNLSVLTEAGVRQAERCRKALR--NI--YFDQCFSSPICRAKST 143 (289)
Q Consensus 75 ~~~~~~~~~i~LvRHGe~~~n~~~~~~-------g~~d~~pLT~~G~~QA~~l~~~l~--~~--~~~~i~sSpl~Ra~qT 143 (289)
....++.|+||||||||+.||+++.-. .+.| +.||+.|++|+..+++.+. ++ .|+.|++|||+||+||
T Consensus 8 l~t~~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD-~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT 86 (248)
T KOG4754|consen 8 LYTKNRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFD-PHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQT 86 (248)
T ss_pred ccccCcceEEEEEeccccccccCcccchhhhhhhhccc-cccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHH
Confidence 344677899999999999999987432 1224 8899999999999999887 33 4899999999999999
Q ss_pred HHHHHhCC-------CCCeEEeCCC----cccccccc---CCCCHHHHHhhCchHHHhhhc--CCCCCCCCCCCCHHHHH
Q 022998 144 AEILWQGR-------DEPLAFIDSL----KEAHLFFL---EGMKNVDARQKYPNEYTTWRE--DPANFNVNGVYPVRNLW 207 (289)
Q Consensus 144 A~~i~~~~-------~~~~~~~~~L----~E~~~g~~---~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Es~~~~~ 207 (289)
+.+.+... .+++.+.|.+ +| ..|.+ .+.+..++.+.||..-....+ ..+.+.+...|+.++..
T Consensus 87 ~v~~f~~~~~e~g~~~~p~~vsp~~i~~~rE-~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a 165 (248)
T KOG4754|consen 87 MVIAFGGYLAEDGEDPAPVKVSPPFIAVCRE-TLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESA 165 (248)
T ss_pred HHHHhcceeccCCCcCCceeecchHHHHHHH-HhCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHH
Confidence 99998765 2467777877 66 23433 345788899999865222222 23345666789999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCC-CCCCcc-cccccCceEEEEEEe
Q 022998 208 GTAREAWKEILLTPGENFLVVTHKSILRALICTALGL-GPERFR-AIDVNNGGITVFIFN 265 (289)
Q Consensus 208 ~R~~~~~~~l~~~~~~~vlvVsHg~~i~~l~~~l~g~-~~~~~~-~~~~~n~si~~l~~~ 265 (289)
.|-+.+++++...+.+.|.||||+++|+.++..+... .++-.. ...+.||..-.|.+-
T Consensus 166 ~r~re~~~~l~~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~~~~~Nce~r~~~i~ 225 (248)
T KOG4754|consen 166 ARSREFLEWLAKRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEILSFSNCEHRSFVIV 225 (248)
T ss_pred HhHHHHHHHHHhCccceEEEEEehHHHHHHHHHhccccCcccchhhhccCCCcCCceeEe
Confidence 9999999999999999999999999999988866532 111111 223578887766543
No 28
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.92 E-value=2.3e-24 Score=174.41 Aligned_cols=136 Identities=38% Similarity=0.548 Sum_probs=116.0
Q ss_pred EEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhcc--CCCEEEECChHHHHHHHHHHHhCC--CCCeEEe
Q 022998 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRAKSTAEILWQGR--DEPLAFI 158 (289)
Q Consensus 83 ~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~--~~~~i~sSpl~Ra~qTA~~i~~~~--~~~~~~~ 158 (289)
+|+|||||++.++..+...+..| .|||+.|++||+.+++.|+.. .++.|||||+.||+|||++++..+ ++++...
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d-~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~~~~~~~~ 79 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGD-GPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFEGLPVEVD 79 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCC-CCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcCCCCeEEC
Confidence 38999999999988877677777 789999999999999999976 899999999999999999999887 4444333
Q ss_pred CCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC---CCCeEEEEeCHHHHH
Q 022998 159 DSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLT---PGENFLVVTHKSILR 235 (289)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~---~~~~vlvVsHg~~i~ 235 (289)
+. .|+..++..+... .++++++|||+++|+
T Consensus 80 ~~-----------------------------------------------~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~ 112 (153)
T cd07040 80 PR-----------------------------------------------ARVLNALLELLARHLLDGKNVLIVSHGGTIR 112 (153)
T ss_pred HH-----------------------------------------------HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHH
Confidence 22 6788888888764 578999999999999
Q ss_pred HHHHHHhCCCCCCcccccccCceEEEEEEec
Q 022998 236 ALICTALGLGPERFRAIDVNNGGITVFIFNQ 266 (289)
Q Consensus 236 ~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~ 266 (289)
.+++++++.+......+.+++|++..+++..
T Consensus 113 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (153)
T cd07040 113 ALLAALLGLSDEEILSLNLPNGSILVLELDE 143 (153)
T ss_pred HHHHHHhCcCHHHhccccCCCCceEEEEEcC
Confidence 9999999987766666789999999999865
No 29
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.91 E-value=1.3e-22 Score=164.79 Aligned_cols=145 Identities=18% Similarity=0.254 Sum_probs=109.1
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCCCCe--EE
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEPL--AF 157 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~--~~ 157 (289)
|+|||||||++.++.. ++.| +|||+.|++||+.++++|++ ..+|.|||||+.||+|||+++++.++.+. ..
T Consensus 1 m~l~LvRHg~a~~~~~----~d~d-r~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~ 75 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----SDSV-RPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSSAEV 75 (152)
T ss_pred CEEEEEeCCCcccccC----CCCC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcceEE
Confidence 4799999999987654 4455 78999999999999999985 57899999999999999999999876543 22
Q ss_pred eCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHH
Q 022998 158 IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRAL 237 (289)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~l 237 (289)
.+.|. |+ ++..+ +..+++.+.....++++||+|+.+|..+
T Consensus 76 ~~~l~-----------------------------------p~-~~~~~----~~~~l~~~~~~~~~~vliVgH~P~i~~l 115 (152)
T TIGR00249 76 LEGLT-----------------------------------PC-GDIGL----VSDYLEALTNEGVASVLLVSHLPLVGYL 115 (152)
T ss_pred ccCcC-----------------------------------CC-CCHHH----HHHHHHHHHhcCCCEEEEEeCCCCHHHH
Confidence 22221 11 22222 3334444433356799999999999999
Q ss_pred HHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEe
Q 022998 238 ICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSL 275 (289)
Q Consensus 238 ~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~ 275 (289)
+.++++.... ..+++|++..++++..+.+.+..+
T Consensus 116 ~~~l~~~~~~----~~~~~~~~~~l~~~~~~~~~l~w~ 149 (152)
T TIGR00249 116 VAELCPGENP----IMFTTGAIASLLWDESKNGTLNWQ 149 (152)
T ss_pred HHHHhCCCCC----CcCcceeEEEEEEecCCCeEEEEe
Confidence 9999975321 368999999999986677766654
No 30
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.6e-22 Score=184.15 Aligned_cols=195 Identities=25% Similarity=0.311 Sum_probs=170.6
Q ss_pred CCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc-cCCC-EEEECChHHHHHHHHHHHhCCCCCeEE
Q 022998 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN-IYFD-QCFSSPICRAKSTAEILWQGRDEPLAF 157 (289)
Q Consensus 80 ~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~-~~~~-~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 157 (289)
.+.+|||.||||++.|+.++..|. ++|+++|.+-|+.+.+++.. ...+ .||||++.||+|||+.+ . ....+..
T Consensus 238 ~pR~i~l~r~geS~~n~~griggd---s~ls~~g~~ya~~l~~f~~~~~~~dl~vwts~~~rti~ta~~l-~-~~~~~~~ 312 (438)
T KOG0234|consen 238 TPRTIYLTRHGESEFNVEGRIGGD---SPLSERGSQYAKSLIKFVEEQSSSDLDVWTSQRKRTIQTAEGL-K-LDYSVEQ 312 (438)
T ss_pred CCceEEEEecCCCccccccccCCc---ccccHHHHHHHHHHHHHHhhhcccCceeccchHHHHhhhHhhc-C-cchhhhh
Confidence 467899999999999999887643 57999999999999999884 3445 89999999999999943 2 1112466
Q ss_pred eCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHH
Q 022998 158 IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRAL 237 (289)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~l 237 (289)
...|+|++.|.++|++..++.+.+|+++.....++..++.|++||+.++..|+...+..+..+. +|+|+||..+|+++
T Consensus 313 ~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~~gESy~D~v~RlePvImElEr~~--~Vlvi~Hqavircl 390 (438)
T KOG0234|consen 313 WKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYPGGESYSDLVQRLEPVIMELERQE--NVLVITHQAVIRCL 390 (438)
T ss_pred HhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecCCCCCHHHHHHhhhhHhHhhhhcc--cEEEEecHHHHHHH
Confidence 7899999999999999999999999999998899999999999999999999999999985333 39999999999999
Q ss_pred HHHHhCCCCCCcccccccCceEEEEEEec-CCcEEEEEecCCCCC
Q 022998 238 ICTALGLGPERFRAIDVNNGGITVFIFNQ-NGEAMLQSLNMTSHM 281 (289)
Q Consensus 238 ~~~l~g~~~~~~~~~~~~n~si~~l~~~~-~g~~~l~~~n~~~hL 281 (289)
+.++++.++.....+.++-.++++++.+. +..|.+..+|++.|+
T Consensus 391 l~Yf~~~~~~e~p~l~~plhtv~~l~~~~y~~~~e~~~~~~~a~t 435 (438)
T KOG0234|consen 391 LAYFLNCSPVELPYLTVPLHTVIKLTPDAYGTTVESIRLNDTANT 435 (438)
T ss_pred HHHHhcCCHhhcccccccceeEEEEeeccccceeEEeeccccccc
Confidence 99999999999999999999999999765 346999999999876
No 31
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.89 E-value=1.7e-21 Score=159.34 Aligned_cols=145 Identities=17% Similarity=0.239 Sum_probs=104.6
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCCCCe--EE
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEPL--AF 157 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~--~~ 157 (289)
|+|||||||++.+|.. +..| +|||++|++||+.++++|.. ..+|.|||||+.||+|||+++++.++++. ..
T Consensus 1 m~l~lvRHg~a~~~~~----~d~~-rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~ 75 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----SDSV-RPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLNLPASAEV 75 (159)
T ss_pred CEEEEEeCCCCCCCCC----CCcC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhCCCCceEE
Confidence 4799999999987642 3344 78999999999999999984 46899999999999999999998876543 22
Q ss_pred eCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHH
Q 022998 158 IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRAL 237 (289)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~l 237 (289)
.+.|.+. .+. ..+...++.+...+.++++||+|...+..+
T Consensus 76 ~~~l~~~------------------------------------~~~----~~~~~~l~~~~~~~~~~vllVgH~P~l~~l 115 (159)
T PRK10848 76 LPELTPC------------------------------------GDV----GLVSAYLQALANEGVASVLVISHLPLVGYL 115 (159)
T ss_pred ccCCCCC------------------------------------CCH----HHHHHHHHHHHhcCCCeEEEEeCcCcHHHH
Confidence 2222221 001 122333333333445799999999999999
Q ss_pred HHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEe
Q 022998 238 ICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSL 275 (289)
Q Consensus 238 ~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~ 275 (289)
...+++..... .+++|++..++++..+...+..+
T Consensus 116 ~~~L~~~~~~~----~~~t~~i~~l~~~~~~~~~l~~~ 149 (159)
T PRK10848 116 VAELCPGETPP----MFTTSAIACVTLDESGKGTFNWQ 149 (159)
T ss_pred HHHHhCCCCCC----CcCCceEEEEEeccCCCeEEEEE
Confidence 99998643221 37999999999975555555543
No 32
>PRK06193 hypothetical protein; Provisional
Probab=99.85 E-value=2.3e-20 Score=157.52 Aligned_cols=150 Identities=22% Similarity=0.185 Sum_probs=109.2
Q ss_pred cCCCcEEEEEcCCCCCCccCCCeeCCCC----CCCCCHHHHHHHHHHHHHhh--ccCCCEEEECChHHHHHHHHHHHhCC
Q 022998 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSN----LSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGR 151 (289)
Q Consensus 78 ~~~~~~i~LvRHGe~~~n~~~~~~g~~d----~~pLT~~G~~QA~~l~~~l~--~~~~~~i~sSpl~Ra~qTA~~i~~~~ 151 (289)
......||||||||+++|..+...|+.| ++|||++|++||+.+++.|+ ...+|.|||||+.||+|||++++...
T Consensus 39 l~~~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~~ 118 (206)
T PRK06193 39 LQKGGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGRH 118 (206)
T ss_pred HhcCCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhccc
Confidence 3456789999999999888777766654 36899999999999999998 45789999999999999999997543
Q ss_pred CCCeEEeCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCH
Q 022998 152 DEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTPGENFLVVTHK 231 (289)
Q Consensus 152 ~~~~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg 231 (289)
..+ ..+.+.+ ...+..|+.+.+.+|+..+++.+- ...++++||+|+
T Consensus 119 ~~~----~~l~~~~-----------------------------~~~~~~~~~~~y~~~l~~~I~~l~-~~~~~vLlVgHn 164 (206)
T PRK06193 119 EKE----IRLNFLN-----------------------------SEPVPAERNALLKAGLRPLLTTPP-DPGTNTVLVGHD 164 (206)
T ss_pred ccC----ccccccc-----------------------------ccCCChhhHHHHHHHHHHHHhhCC-CCCCeEEEEeCc
Confidence 211 1111110 001134677777888888888874 567789999999
Q ss_pred HHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEE
Q 022998 232 SILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAML 272 (289)
Q Consensus 232 ~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l 272 (289)
..|+.+...+.+ +.|+...+...++|.+.+
T Consensus 165 p~i~~l~g~~~~-----------~~g~~~~~~~~~~g~~~~ 194 (206)
T PRK06193 165 DNLEAATGIYPE-----------PEGEAAVFEPLGGEGFKL 194 (206)
T ss_pred hHHHHHhCCCCc-----------cCccEEEEEeCCCCCceE
Confidence 999886653322 256667777766665543
No 33
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.83 E-value=3.4e-19 Score=149.16 Aligned_cols=136 Identities=18% Similarity=0.180 Sum_probs=96.1
Q ss_pred CCCcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhcc-CCCEEEECChHHHHHHHHHHHhCCCCCeEE
Q 022998 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI-YFDQCFSSPICRAKSTAEILWQGRDEPLAF 157 (289)
Q Consensus 79 ~~~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~~-~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~ 157 (289)
...++||||||||+.....+ .+..|.+|||++|++||+.+++.|++. ..|.|||||+.||+|||+++++ +.++.+
T Consensus 52 ~~~~~L~LiRHGet~~~~~~--~~~sD~RpLTerG~~qA~~lg~~L~~~~~~d~I~sSpa~Ra~qTAe~ia~--~~~v~~ 127 (201)
T PRK15416 52 KQHPVVVLFRHAERCDRSDN--QCLSDKTGITVKGTQDARELGKAFSADIPDYDLYSSNTVRTIQSATWFSA--GKKLTV 127 (201)
T ss_pred cCCCEEEEEeCccccCccCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCCHHHHHHHHHHhc--CCCcEe
Confidence 34578999999998322111 122333789999999999999999853 3479999999999999999987 446777
Q ss_pred eCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHHHHHH
Q 022998 158 IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILL-TPGENFLVVTHKSILRA 236 (289)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~-~~~~~vlvVsHg~~i~~ 236 (289)
++.|.|++. +...++..++. .++++|+||+|+..+..
T Consensus 128 ~~~Lye~~~------------------------------------------~~~~~i~~~i~~~~~~tVLIVGHnp~i~~ 165 (201)
T PRK15416 128 DKRLSDCGN------------------------------------------GIYSAIKDLQRKSPDKNIVIFTHNHCLTY 165 (201)
T ss_pred cHHHhhcCc------------------------------------------hhHHHHHHHHHhCCCCEEEEEeCchhHHH
Confidence 777777642 11222333332 34589999999999999
Q ss_pred HHHHHhCCCCCCcccccccCceEEEEEEecCC
Q 022998 237 LICTALGLGPERFRAIDVNNGGITVFIFNQNG 268 (289)
Q Consensus 237 l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g 268 (289)
+.....+. .++++.+..+.++.++
T Consensus 166 La~~~~~~--------~~~~~~~~~l~~~~~~ 189 (201)
T PRK15416 166 IAKDKRGV--------KFKPDYLDALVMHVEK 189 (201)
T ss_pred HHHHhcCC--------CCCCCceEEEEEEccC
Confidence 98865543 2456666666665443
No 34
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.82 E-value=3.2e-19 Score=144.41 Aligned_cols=138 Identities=26% Similarity=0.321 Sum_probs=101.4
Q ss_pred CcEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc--cCCCEEEECChHHHHHHHHHHHhCCCCC-eEE
Q 022998 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEP-LAF 157 (289)
Q Consensus 81 ~~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~-~~~ 157 (289)
|++|||+|||++.+...+. ...| +|||++|++|++.+|+.|++ ..+|+|+|||+.||+|||+++++.++.. .++
T Consensus 1 m~~L~LmRHgkA~~~~~~~--~D~d-R~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~~~~~~~ 77 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGI--ADFD-RPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLGEKKVEV 77 (163)
T ss_pred CceEEEeecccccccCCCC--CCcc-CcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhCccccee
Confidence 5789999999998865541 2344 89999999999999999995 5679999999999999999999998732 111
Q ss_pred -eCCCccccccccCCCCHHHHHhhCchHHHhhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 022998 158 -IDSLKEAHLFFLEGMKNVDARQKYPNEYTTWREDPANFNVNGVYPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRA 236 (289)
Q Consensus 158 -~~~L~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~ 236 (289)
+..+.+- .. ..+...++.+-+ .-.++++|+|-..+..
T Consensus 78 ~~~l~p~~-------------------------------------d~----~~~l~~l~~~~d-~v~~vllVgH~P~l~~ 115 (163)
T COG2062 78 FEELLPNG-------------------------------------DP----GTVLDYLEALGD-GVGSVLLVGHNPLLEE 115 (163)
T ss_pred ccccCCCC-------------------------------------CH----HHHHHHHHHhcc-cCceEEEECCCccHHH
Confidence 1111110 11 112333333322 3578999999999999
Q ss_pred HHHHHhCCCCCCcccccccCceEEEEEEec
Q 022998 237 LICTALGLGPERFRAIDVNNGGITVFIFNQ 266 (289)
Q Consensus 237 l~~~l~g~~~~~~~~~~~~n~si~~l~~~~ 266 (289)
+...+.+. .-....++.++|.+++++.
T Consensus 116 l~~~L~~~---~~~~~~fptsgia~l~~~~ 142 (163)
T COG2062 116 LALLLAGG---ARLPVKFPTSGIAVLEFDG 142 (163)
T ss_pred HHHHHccc---cccccCCCcccEEEEEecc
Confidence 99999875 2233468999999999984
No 35
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.3e-18 Score=148.08 Aligned_cols=167 Identities=20% Similarity=0.138 Sum_probs=123.5
Q ss_pred CCcEEEEEcCCCCCCccCCC-e-----------------------------eCCCCCCCCCHHHHHHHHHHHHHhh--cc
Q 022998 80 YPKKVTLVRHGLSSWNDEGR-V-----------------------------QGSSNLSVLTEAGVRQAERCRKALR--NI 127 (289)
Q Consensus 80 ~~~~i~LvRHGe~~~n~~~~-~-----------------------------~g~~d~~pLT~~G~~QA~~l~~~l~--~~ 127 (289)
..+.|+++||||+.++.-+. | .+..-++|||..|.-|++..|+.|. +.
T Consensus 11 ~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~ 90 (272)
T KOG3734|consen 11 VPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGI 90 (272)
T ss_pred CCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCC
Confidence 35789999999998754332 1 1223348899999999999999987 57
Q ss_pred CCCEEEECChHHHHHHHHHHHhCCC----CCeEEeCCCccccc----cccCCC-CHHHHHhhCchHHHhhhcCCCCCCCC
Q 022998 128 YFDQCFSSPICRAKSTAEILWQGRD----EPLAFIDSLKEAHL----FFLEGM-KNVDARQKYPNEYTTWREDPANFNVN 198 (289)
Q Consensus 128 ~~~~i~sSpl~Ra~qTA~~i~~~~~----~~~~~~~~L~E~~~----g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (289)
.++.||+||..||+|||..+.+..+ +.+.+++.|.|+.. |.++.. +..++....+..-..+.-. ....+-
T Consensus 91 ~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~~~~VD~~y~P~-~~~~~~ 169 (272)
T KOG3734|consen 91 AIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFPGFPVDLNYDPV-YKETPR 169 (272)
T ss_pred CcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhccCCCcccccchh-hhhccc
Confidence 8899999999999999999999887 67899999999753 222322 3444443322111100000 012345
Q ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHHHhCCCCC
Q 022998 199 GVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRALICTALGLGPE 247 (289)
Q Consensus 199 ~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l~~~l~g~~~~ 247 (289)
.+||.+++.+|+.+.+.+|+.+ +++++|||+||..+....+.+.|.+..
T Consensus 170 ~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~~~~ 219 (272)
T KOG3734|consen 170 WGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGLPVR 219 (272)
T ss_pred ccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCCCce
Confidence 6799999999999999999974 777899999999999999999885544
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.30 E-value=3.1e-05 Score=67.39 Aligned_cols=58 Identities=26% Similarity=0.142 Sum_probs=48.2
Q ss_pred cEEEEEcCCCCCCccCCCeeCCCCCCCCCHHHHHHHHHHHHHhhc-----cC-------CCEEEECChHHHHHHHHHHHh
Q 022998 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN-----IY-------FDQCFSSPICRAKSTAEILWQ 149 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~~~~~g~~d~~pLT~~G~~QA~~l~~~l~~-----~~-------~~~i~sSpl~Ra~qTA~~i~~ 149 (289)
..++++|||+..- ..||+.|++|+..+|++++. .. .-.|++|+..||+|||+.++.
T Consensus 4 ~v~~~~RHg~r~p------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~ 71 (242)
T cd07061 4 QVQVLSRHGDRYP------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLA 71 (242)
T ss_pred EEEEEEecCCCCc------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHH
Confidence 4578999999842 35999999999999999983 11 127899999999999999998
Q ss_pred CC
Q 022998 150 GR 151 (289)
Q Consensus 150 ~~ 151 (289)
++
T Consensus 72 gl 73 (242)
T cd07061 72 GL 73 (242)
T ss_pred hc
Confidence 87
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=96.87 E-value=0.001 Score=60.39 Aligned_cols=44 Identities=27% Similarity=0.210 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHHHHhhc----c-------CCCEEEECChHHHHHHHHHHHhCC
Q 022998 108 VLTEAGVRQAERCRKALRN----I-------YFDQCFSSPICRAKSTAEILWQGR 151 (289)
Q Consensus 108 pLT~~G~~QA~~l~~~l~~----~-------~~~~i~sSpl~Ra~qTA~~i~~~~ 151 (289)
.||+.|.+|...+|++++. . .-=.|++|...||++||+.+..++
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 4999999999999999983 1 111689999999999999988765
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=96.43 E-value=0.0076 Score=56.74 Aligned_cols=67 Identities=21% Similarity=0.126 Sum_probs=48.3
Q ss_pred cEEEEEcCCCCCC-----ccCCC-----e-eCCCCCCCCCHHHHHHHHHHHHHhhc---c---------CCC--EEEECC
Q 022998 82 KKVTLVRHGLSSW-----NDEGR-----V-QGSSNLSVLTEAGVRQAERCRKALRN---I---------YFD--QCFSSP 136 (289)
Q Consensus 82 ~~i~LvRHGe~~~-----n~~~~-----~-~g~~d~~pLT~~G~~QA~~l~~~l~~---~---------~~~--~i~sSp 136 (289)
..-.+.|||...- ..+.. + .|+ -.||+.|.+|+-+||+.|++ . ..+ .|.||+
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~---GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd 112 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGW---GQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTD 112 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCCc---chhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCC
Confidence 4567899998652 11110 1 122 24999999999999999985 1 111 578999
Q ss_pred hHHHHHHHHHHHhCC
Q 022998 137 ICRAKSTAEILWQGR 151 (289)
Q Consensus 137 l~Ra~qTA~~i~~~~ 151 (289)
.-||+.||+.+..++
T Consensus 113 ~nRtl~SAqs~laGl 127 (411)
T KOG3720|consen 113 VNRTLMSAQSVLAGL 127 (411)
T ss_pred ccHHHHHHHHHHHhh
Confidence 999999999998875
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.05 E-value=0.016 Score=54.62 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=48.4
Q ss_pred cEEEEEcCCCCCCccC----------CCeeCCC-CCCCCCHHHHHHHHHHHHHhhc-------------cCCC--EEEEC
Q 022998 82 KKVTLVRHGLSSWNDE----------GRVQGSS-NLSVLTEAGVRQAERCRKALRN-------------IYFD--QCFSS 135 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~~----------~~~~g~~-d~~pLT~~G~~QA~~l~~~l~~-------------~~~~--~i~sS 135 (289)
+.++|.|||-..--.. ..|.-|. ....||.+|.++-..+|++++. ..++ .++++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 5699999997543211 1222222 1134999999999999997762 0122 57899
Q ss_pred ChHHHHHHHHHHHhCC
Q 022998 136 PICRAKSTAEILWQGR 151 (289)
Q Consensus 136 pl~Ra~qTA~~i~~~~ 151 (289)
+..||++||+.+..++
T Consensus 113 ~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 113 SLQRTVATAQFFITGA 128 (413)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999998887765
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.85 E-value=0.031 Score=52.77 Aligned_cols=70 Identities=19% Similarity=0.117 Sum_probs=46.9
Q ss_pred cEEEEEcCCCCCCcc---------CCCeeCCC-CCCCCCHHHHHHHHHHHHHhhc-------------cCCC--EEEECC
Q 022998 82 KKVTLVRHGLSSWND---------EGRVQGSS-NLSVLTEAGVRQAERCRKALRN-------------IYFD--QCFSSP 136 (289)
Q Consensus 82 ~~i~LvRHGe~~~n~---------~~~~~g~~-d~~pLT~~G~~QA~~l~~~l~~-------------~~~~--~i~sSp 136 (289)
+.++|-|||-..-.. ...|..|. ....||++|.+|...+|+++++ ...+ .|++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~ 115 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADV 115 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCC
Confidence 458899999753211 11222111 1134999999999999998872 1122 577888
Q ss_pred hHHHHHHHHHHHhCC
Q 022998 137 ICRAKSTAEILWQGR 151 (289)
Q Consensus 137 l~Ra~qTA~~i~~~~ 151 (289)
..||+.||+.+..++
T Consensus 116 ~~RTi~SAqafl~Gl 130 (436)
T PRK10172 116 DQRTRKTGEAFLAGL 130 (436)
T ss_pred chHHHHHHHHHHHhc
Confidence 899999998887765
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=92.55 E-value=0.13 Score=50.99 Aligned_cols=44 Identities=32% Similarity=0.283 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHHHHHHhhccCC-----------------CEEEECChHHHHHHHHHHHhCC
Q 022998 108 VLTEAGVRQAERCRKALRNIYF-----------------DQCFSSPICRAKSTAEILWQGR 151 (289)
Q Consensus 108 pLT~~G~~QA~~l~~~l~~~~~-----------------~~i~sSpl~Ra~qTA~~i~~~~ 151 (289)
.||..|+-||++||+.++..-+ -.||+|.-.|.+-||+.+++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 4999999999999999983111 1799999999999999999885
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=73.32 E-value=7 Score=37.05 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHHHhhc-----cCCC--EEEECChHHHHHHHHHHHhCC
Q 022998 108 VLTEAGVRQAERCRKALRN-----IYFD--QCFSSPICRAKSTAEILWQGR 151 (289)
Q Consensus 108 pLT~~G~~QA~~l~~~l~~-----~~~~--~i~sSpl~Ra~qTA~~i~~~~ 151 (289)
.|...|+..|.++++.+-. ..++ .|+++-..||.+||+..+.++
T Consensus 132 ~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GL 182 (467)
T KOG1382|consen 132 QLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGL 182 (467)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhh
Confidence 4788999999999887752 2233 689999999999999998876
No 43
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=58.04 E-value=29 Score=31.42 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCCCCC
Q 022998 204 RNLWGTAREAWKEILLTPGENFLVVTHKSILRALICTALGLGPE 247 (289)
Q Consensus 204 ~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~l~~~l~g~~~~ 247 (289)
+.+..|+...+..+..+++++++||+||.--..++.++......
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 44556666666666567888899999999998888888765543
No 44
>PRK04946 hypothetical protein; Provisional
Probab=49.79 E-value=66 Score=26.75 Aligned_cols=44 Identities=11% Similarity=-0.152 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCH---HHHHHHHHHHhCC
Q 022998 200 VYPVRNLWGTAREAWKEILLTPGENFLVVTHK---SILRALICTALGL 244 (289)
Q Consensus 200 ~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg---~~i~~l~~~l~g~ 244 (289)
|-+.+|..+.+..++....... ...+.|-|| ++++..+..++..
T Consensus 102 G~~~eeA~~~L~~fl~~a~~~g-~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 102 GLTQLQAKQELGALIAACRKEH-VFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCHHHHHHHHHHHHHHHHHcC-CCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 5688999999999998875544 445566699 9999999988864
No 45
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=43.40 E-value=24 Score=29.32 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHH
Q 022998 202 PVRNLWGTAREAWKEILL-TPGENFLVVTHKS 232 (289)
Q Consensus 202 s~~~~~~R~~~~~~~l~~-~~~~~vlvVsHg~ 232 (289)
+.+++.+|+..+++.|.+ +++..|++|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 455788999999999987 5789999999643
No 46
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=36.34 E-value=2.9e+02 Score=25.27 Aligned_cols=122 Identities=8% Similarity=-0.130 Sum_probs=70.5
Q ss_pred CEEEECChHHHHHHHHHHHhCCCCCeEEeCCCccccccccCCCCHHHHHhhCchH--------------HHhhhcCCCCC
Q 022998 130 DQCFSSPICRAKSTAEILWQGRDEPLAFIDSLKEAHLFFLEGMKNVDARQKYPNE--------------YTTWREDPANF 195 (289)
Q Consensus 130 ~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E~~~g~~~g~~~~~~~~~~~~~--------------~~~~~~~~~~~ 195 (289)
..|..|+-.==.-+|+.+++.++.++.+.| +|.+.-....++.+..|+. ...+..-...+
T Consensus 30 ~VIlvsDn~aD~~lA~~iaellNA~Vlttp------wg~ynes~~~eI~~lnpd~VLIIGGp~AVs~~yE~~Lks~GitV 103 (337)
T COG2247 30 VVILVSDNEADLLLALPIAELLNAPVLTTP------WGIYNESVLDEIIELNPDLVLIIGGPIAVSPNYENALKSLGITV 103 (337)
T ss_pred EEEEecchHHHHHHhhHHHHHhCCeeEecC------cccccHHHHHHHHhhCCceEEEECCCCcCChhHHHHHHhCCcEE
Confidence 567788888888889999999999887666 2222222334444444331 11222211222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEE
Q 022998 196 NVNGVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGIT 260 (289)
Q Consensus 196 ~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~ 260 (289)
.--+|.+..|-.+++..++..-+.. -+...+||.||-....-+..++.. ..-.+-+.|+++.
T Consensus 104 ~RigG~nR~ETa~~v~~~~~~~yp~af~n~kvvvv~GwDy~~~~~e~~k~---~~~p~~~~n~~~~ 166 (337)
T COG2247 104 KRIGGANRYETAEKVAKFFREDYPNAFKNVKVVVVYGWDYADALMELMKE---GIVPVILKNTSIL 166 (337)
T ss_pred EEecCcchHHHHHHHHHHHHhhchhhhcCeEEEEEeccccHHHHHHHHhc---CcceeEecccccc
Confidence 2346777788888888888654432 233677888998777544445443 1122235666655
No 47
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=35.91 E-value=40 Score=22.45 Aligned_cols=27 Identities=15% Similarity=0.065 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHhCCCCCeEEeCCCccc
Q 022998 137 ICRAKSTAEILWQGRDEPLAFIDSLKEA 164 (289)
Q Consensus 137 l~Ra~qTA~~i~~~~~~~~~~~~~L~E~ 164 (289)
+++|+++|..++. .|+.++..|-..|.
T Consensus 9 LR~~lE~A~~La~-~GIRFVpiPv~~de 35 (61)
T PF07131_consen 9 LRKALEMAHSLAH-IGIRFVPIPVVTDE 35 (61)
T ss_pred HHHHHHHHHHHHH-cCceeeccccccHH
Confidence 7899999998876 48777777766654
No 48
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=35.85 E-value=1.8e+02 Score=27.87 Aligned_cols=109 Identities=17% Similarity=0.117 Sum_probs=55.7
Q ss_pred HHHHHHHhhccC----CCE-EEECChHHHHHHHHHHHhCC----CCCe--EEeCCCccccccccCCCCHHHHHhhCchHH
Q 022998 117 AERCRKALRNIY----FDQ-CFSSPICRAKSTAEILWQGR----DEPL--AFIDSLKEAHLFFLEGMKNVDARQKYPNEY 185 (289)
Q Consensus 117 A~~l~~~l~~~~----~~~-i~sSpl~Ra~qTA~~i~~~~----~~~~--~~~~~L~E~~~g~~~g~~~~~~~~~~~~~~ 185 (289)
|.+|++.|.+.. .++ .|++.=.=|+|||--++-+. |.+- .+..+-+-++-..+-+++.......+...+
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~ 168 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFY 168 (449)
T ss_pred HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhc
Confidence 455566665432 454 56888888999988776542 3321 122222222222344445444333332222
Q ss_pred Hhh------hcCCCCCCCC-CCCCHHHHHHHHHHHHHHHHcCCC-CeEE
Q 022998 186 TTW------REDPANFNVN-GVYPVRNLWGTAREAWKEILLTPG-ENFL 226 (289)
Q Consensus 186 ~~~------~~~~~~~~~~-~~Es~~~~~~R~~~~~~~l~~~~~-~~vl 226 (289)
... ...|..|..+ .+|+.+++ .+....+++++...+ ++|.
T Consensus 169 ~~ll~~~~~~~~P~~y~~~~~~~~~~~~-~~~a~~le~~i~~~g~~~IA 216 (449)
T COG0161 169 DPLLPEVLHLPAPYAYRRGFFGEGDEEF-AEAADELEALILEHGPETIA 216 (449)
T ss_pred cccccCceecCCCcccccCCCCCChHHH-HHHHHHHHHHHHhcCcccEE
Confidence 211 1122222222 36788888 888888888886533 4544
No 49
>PRK00035 hemH ferrochelatase; Reviewed
Probab=34.34 E-value=3.5e+02 Score=24.49 Aligned_cols=122 Identities=16% Similarity=0.055 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCE------EEECChHHHHHHHHHHHhCCCC-CeEEeCCCccccccccCCCCHHHHHh
Q 022998 107 SVLTEAGVRQAERCRKALRNIYFDQ------CFSSPICRAKSTAEILWQGRDE-PLAFIDSLKEAHLFFLEGMKNVDARQ 179 (289)
Q Consensus 107 ~pLT~~G~~QA~~l~~~l~~~~~~~------i~sSpl~Ra~qTA~~i~~~~~~-~~~~~~~L~E~~~g~~~g~~~~~~~~ 179 (289)
+||...-++|++.+.+.|.....+. =|+.|... ++.+.+.+. |+ .+.+.|.+-- +...+...+.+
T Consensus 70 SPl~~~t~~q~~~L~~~l~~~~~~~~V~~am~y~~P~i~--eal~~l~~~-G~~~IivlPL~p~-----~s~~t~gs~~~ 141 (333)
T PRK00035 70 SPLNVITRRQAEALQAELAARGPDLPVYLGMRYWNPSIE--EALEALKAD-GVDRIVVLPLYPQ-----YSYSTTASYFE 141 (333)
T ss_pred ChhHHHHHHHHHHHHHHHhccCCCceEEEeecCCCCCHH--HHHHHHHhc-CCCEEEEEECCCc-----cccccHHHHHH
Confidence 5788888888888888886422221 13455432 344444332 33 3444554421 11222222333
Q ss_pred hCchHHHhhhcC-CCCCCCCCCCC---HHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHH
Q 022998 180 KYPNEYTTWRED-PANFNVNGVYP---VRNLWGTAREAWKEILLT-PGENFLVVTHKSILRA 236 (289)
Q Consensus 180 ~~~~~~~~~~~~-~~~~~~~~~Es---~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~i~~ 236 (289)
..+.....+... ...+..+.+.+ .+.+.+++...+...-.. .+..+|++.||-..+.
T Consensus 142 ~i~~~~~~~~~~~~i~~i~~~~~~p~~i~~l~~~I~~~~~~~~~~~~~~~llfs~HG~P~~~ 203 (333)
T PRK00035 142 DLARALAKLRLQPEIRFIRSYYDHPGYIEALAESIREALAKHGEDPEPDRLLFSAHGLPQRY 203 (333)
T ss_pred HHHHHHHhcCCCCcEEEeCCccCCHHHHHHHHHHHHHHHHhcCcccCCcEEEEecCCCchHH
Confidence 333333322211 11112222222 233445555555433111 3467999999965554
No 50
>PF11760 CbiG_N: Cobalamin synthesis G N-terminal; InterPro: IPR021744 Members of this family are involved in cobalamin synthesis. The gene encoded by P72862 from SWISSPROT has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyse adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyses a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process []. Within the cobalamin synthesis pathway CbiG catalyses the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. The N-terminal of the enzyme is conserved in this family, and the C-terminal and the mid-sections are conserved independently in other families, CbiG_C and CbiG_mid, although the distinct function of each region is unclear. ; PDB: 3EEQ_B.
Probab=33.66 E-value=1.2e+02 Score=21.78 Aligned_cols=54 Identities=11% Similarity=0.233 Sum_probs=28.7
Q ss_pred HHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCCCCCCcccccccCceEEEEEEecCCcEEEEEec
Q 022998 212 EAWKEILLTPGENFLVVTHKSILRALICTALGLGPERFRAIDVNNGGITVFIFNQNGEAMLQSLN 276 (289)
Q Consensus 212 ~~~~~l~~~~~~~vlvVsHg~~i~~l~~~l~g~~~~~~~~~~~~n~si~~l~~~~~g~~~l~~~n 276 (289)
.++++++...+.-|.|.+=|.++|.+...+.+...+ .-++..+++|+|.+.-++
T Consensus 3 ~~~~~~~~~~d~~I~i~A~GivvR~iap~l~dK~~D-----------PaVvvvde~g~~vIplL~ 56 (84)
T PF11760_consen 3 DLLRELFRRYDAIIFIMAAGIVVRAIAPLLKDKDTD-----------PAVVVVDEDGRFVIPLLG 56 (84)
T ss_dssp --HHHHCCC-SEEEEES-HHHHHHHHHHH---TTT-------------EEEEE-TT--EEEEEE-
T ss_pred hHHHHHHcCCCeEEEEeCcHHHHHHhChhhcccCCC-----------CCEEEEeCCCCEEEEecc
Confidence 345566665666777888899999987776543222 334667778888776554
No 51
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=33.12 E-value=77 Score=29.67 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHHHHHhhc------cC-------CC--EEEECChHHHHHHHHHHHh
Q 022998 108 VLTEAGVRQAERCRKALRN------IY-------FD--QCFSSPICRAKSTAEILWQ 149 (289)
Q Consensus 108 pLT~~G~~QA~~l~~~l~~------~~-------~~--~i~sSpl~Ra~qTA~~i~~ 149 (289)
.||.+|.-|-..+|+.+.+ .. .+ .|+|+-+.|+.|.|-.+.-
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf 224 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLF 224 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHH
Confidence 3999999999999998862 11 12 4899999999999988743
No 52
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=32.75 E-value=69 Score=28.04 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEeCHH
Q 022998 204 RNLWGTAREAWKEILLTPGENFLVVTHKS 232 (289)
Q Consensus 204 ~~~~~R~~~~~~~l~~~~~~~vlvVsHg~ 232 (289)
+.|++++...++++..+. +.+++|||..
T Consensus 180 ~~F~~K~~~rl~e~~~~~-~tiv~VSHd~ 207 (249)
T COG1134 180 AAFQEKCLERLNELVEKN-KTIVLVSHDL 207 (249)
T ss_pred HHHHHHHHHHHHHHHHcC-CEEEEEECCH
Confidence 467788888888886554 8999999984
No 53
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=31.03 E-value=63 Score=32.11 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=27.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHH
Q 022998 199 GVYPVRNLWGTAREAWKEILLT-PGENFLVVTHKSI 233 (289)
Q Consensus 199 ~~Es~~~~~~R~~~~~~~l~~~-~~~~vlvVsHg~~ 233 (289)
..|...++..|++..++.+... .++.|+||+|+-=
T Consensus 188 ~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMG 223 (642)
T PLN02517 188 NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMG 223 (642)
T ss_pred chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCc
Confidence 3566788889999999988764 4789999999643
No 54
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=29.75 E-value=1e+02 Score=26.79 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 022998 201 YPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRA 236 (289)
Q Consensus 201 Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~ 236 (289)
+|.+|..+|+.+.+.. ..+++..++|+|+++...
T Consensus 127 ~s~~eA~~~ive~~~~--~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 127 ISLEESAQRIIAAAKK--APPDLPLILLAHNGPSGL 160 (238)
T ss_pred CCHHHHHHHHHHHhhh--cCCCCCeEEEeCcCCcCC
Confidence 6888888888887742 245667899999987644
No 55
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=29.73 E-value=57 Score=30.49 Aligned_cols=30 Identities=10% Similarity=0.269 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCeEEEEeCH
Q 022998 202 PVRNLWGTAREAWKEILLTPGENFLVVTHK 231 (289)
Q Consensus 202 s~~~~~~R~~~~~~~l~~~~~~~vlvVsHg 231 (289)
...+...++++.++......++.|+||+|+
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~~~kv~li~HS 127 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKNGKKVVLIAHS 127 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEEeC
Confidence 345677888888888776558899999995
No 56
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=26.87 E-value=93 Score=26.87 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 022998 207 WGTAREAWKEILLTPGENFLVVTHKSILRA 236 (289)
Q Consensus 207 ~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~ 236 (289)
.+.+...+..+..+.+++|++|||...+..
T Consensus 178 ~~~V~~ll~~~~~~~g~tii~VTHd~~lA~ 207 (226)
T COG1136 178 AKEVLELLRELNKERGKTIIMVTHDPELAK 207 (226)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEcCCHHHHH
Confidence 345666666665566889999999988765
No 57
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=26.81 E-value=49 Score=29.56 Aligned_cols=27 Identities=19% Similarity=0.199 Sum_probs=22.6
Q ss_pred EECChHHHHHHHHHHHhCCCCCeEEeC
Q 022998 133 FSSPICRAKSTAEILWQGRDEPLAFID 159 (289)
Q Consensus 133 ~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 159 (289)
||.--.||+++++...+.++.|+.+..
T Consensus 12 FCaGV~RAI~ive~al~~~g~pIyv~~ 38 (294)
T COG0761 12 FCAGVDRAIQIVERALEEYGAPIYVRH 38 (294)
T ss_pred cchhHHHHHHHHHHHHHHcCCCeEEEe
Confidence 566679999999999999998876654
No 58
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=25.60 E-value=64 Score=28.31 Aligned_cols=34 Identities=15% Similarity=0.022 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHH
Q 022998 201 YPVRNLWGTAREAWKEILLTPGENFLVVTHKSIL 234 (289)
Q Consensus 201 Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i 234 (289)
|+.++...-+..+++.-....++.|++||.||+.
T Consensus 9 ~~~~d~~s~~~eFi~~q~s~~~rrIVlVTSGGTt 42 (302)
T KOG2728|consen 9 ESLDDPGSLIEEFIKLQASLQGRRIVLVTSGGTT 42 (302)
T ss_pred ccccchhHHHHHHHHHHhhccCceEEEEecCCeE
Confidence 4444444445555554434466779999999875
No 59
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.50 E-value=83 Score=27.57 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHcCCCCeEEEEeCHHH
Q 022998 208 GTAREAWKEILLTPGENFLVVTHKSI 233 (289)
Q Consensus 208 ~R~~~~~~~l~~~~~~~vlvVsHg~~ 233 (289)
..+...+.+|+.+.+++|++|||.--
T Consensus 167 ~~lq~~l~~lw~~~~~TvllVTHdi~ 192 (248)
T COG1116 167 EELQDELLRLWEETRKTVLLVTHDVD 192 (248)
T ss_pred HHHHHHHHHHHHhhCCEEEEEeCCHH
Confidence 34555666677777899999999843
No 60
>PRK13695 putative NTPase; Provisional
Probab=24.00 E-value=2.2e+02 Score=22.80 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=23.0
Q ss_pred HHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhC
Q 022998 210 AREAWKEILLTPGENFLVVTHKSILRALICTALG 243 (289)
Q Consensus 210 ~~~~~~~l~~~~~~~vlvVsHg~~i~~l~~~l~g 243 (289)
..+.+..++ +.+..+++|+|...+..+...+.-
T Consensus 115 ~~~~l~~~~-~~~~~~i~v~h~~~~~~~~~~i~~ 147 (174)
T PRK13695 115 FVKAVEEVL-DSEKPVIATLHRRSVHPFVQEIKS 147 (174)
T ss_pred HHHHHHHHH-hCCCeEEEEECchhhHHHHHHHhc
Confidence 345555665 456899999998777776666543
No 61
>PF13479 AAA_24: AAA domain
Probab=23.39 E-value=1.2e+02 Score=25.50 Aligned_cols=37 Identities=14% Similarity=0.035 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 022998 200 VYPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRA 236 (289)
Q Consensus 200 ~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~ 236 (289)
+-.+.++..+..++++.++...+.+|++++|...-..
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~~~~~~VI~tah~~~~~~ 141 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLNALGKNVIFTAHAKEEED 141 (213)
T ss_pred cchHHHHHHHHHHHHHHHHHHCCCcEEEEEEEEEEEc
Confidence 3456677788888888877767899999999866554
No 62
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=23.23 E-value=2.6e+02 Score=21.08 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHc-CCCCeEEEEeC--HHHHHHHHHHHhC
Q 022998 205 NLWGTAREAWKEILL-TPGENFLVVTH--KSILRALICTALG 243 (289)
Q Consensus 205 ~~~~R~~~~~~~l~~-~~~~~vlvVsH--g~~i~~l~~~l~g 243 (289)
....++.+.+.++.+ .+...|+|++| ||.+..++...+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 445566666666654 35689999999 5777777665553
No 63
>PRK09191 two-component response regulator; Provisional
Probab=21.70 E-value=3.8e+02 Score=22.61 Aligned_cols=43 Identities=12% Similarity=0.068 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhC
Q 022998 201 YPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRALICTALG 243 (289)
Q Consensus 201 Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~l~~~l~g 243 (289)
.|...+..|+.++...+...-...+++|......+..+...+.
T Consensus 116 ~s~~tV~~~l~ra~~~l~~~~~~~~liidd~~~~~~~l~~~L~ 158 (261)
T PRK09191 116 VDPAEAEALLDDARAEIARQVATRVLIIEDEPIIAMDLEQLVE 158 (261)
T ss_pred CCHHHHHHHHHHHHHHHhccCCCeEEEEcCcHHHHHHHHHHHh
Confidence 3556777888888887766666679999988888777776663
No 64
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=21.68 E-value=34 Score=30.37 Aligned_cols=57 Identities=12% Similarity=-0.004 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHH---hhccCCCE-EEECChHHHHHHHHHHHhCCCC--CeEEeCCCcc
Q 022998 107 SVLTEAGVRQAERCRKA---LRNIYFDQ-CFSSPICRAKSTAEILWQGRDE--PLAFIDSLKE 163 (289)
Q Consensus 107 ~pLT~~G~~QA~~l~~~---l~~~~~~~-i~sSpl~Ra~qTA~~i~~~~~~--~~~~~~~L~E 163 (289)
.++.+.|..-+..+.++ +.++.+|. |..|+..||++|+..+..+.-. .+...+.++-
T Consensus 41 ~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~~i~~ifcSPs~r~ 103 (272)
T KOG3734|consen 41 GKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGIAIDVIFCSPSLRC 103 (272)
T ss_pred CCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCCCcceeecCCchhH
Confidence 55777777778888777 34678888 9999999999999999877532 1344555553
No 65
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=20.75 E-value=70 Score=28.31 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=24.2
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 022998 200 VYPVRNLWGTAREAWKEILLTPGENFLVVTHKSILRA 236 (289)
Q Consensus 200 ~Es~~~~~~R~~~~~~~l~~~~~~~vlvVsHg~~i~~ 236 (289)
..|.++..+++.+.++.... -..++++.+|||.|..
T Consensus 191 ~~sl~~a~~~~~~i~~aa~~-v~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 191 ALSLEEAAERIQEIFDAARA-VNPDIIVLCHGGPIAT 226 (268)
T ss_dssp S--HHHHHHHHHHHHHHHHC-C-TT-EEEEECTTB-S
T ss_pred cCCHHHHHHHHHHHHHHHHH-hCCCeEEEEeCCCCCC
Confidence 46888888888888877653 3456899999998853
No 66
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=20.03 E-value=2e+02 Score=21.69 Aligned_cols=30 Identities=13% Similarity=0.065 Sum_probs=21.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCCeEEEEe
Q 022998 198 NGVYPVRNLWGTAREAWKEILLTPGENFLVVT 229 (289)
Q Consensus 198 ~~~Es~~~~~~R~~~~~~~l~~~~~~~vlvVs 229 (289)
..+++.+++.+++.+.++++ ..++.++|.|
T Consensus 36 ~~~~~~~~~~~~l~~~i~~~--~~~~~vivlt 65 (116)
T TIGR00824 36 VPGENAETLQEKYNAALADL--DTEEEVLFLV 65 (116)
T ss_pred CCCcCHHHHHHHHHHHHHhc--CCCCCEEEEE
Confidence 34578888999998888876 3344566655
Done!