Query 023002
Match_columns 289
No_of_seqs 281 out of 741
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 14:41:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023002.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023002hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2csy_A Zinc finger protein 183 98.9 4.4E-10 1.5E-14 83.7 3.7 34 255-288 11-44 (81)
2 2kr4_A Ubiquitin conjugation f 98.9 7.6E-10 2.6E-14 84.7 3.1 30 259-288 14-43 (85)
3 2ysj_A Tripartite motif-contai 98.8 3.9E-09 1.3E-13 74.9 4.7 31 258-288 19-49 (63)
4 2kre_A Ubiquitin conjugation f 98.8 1.7E-09 5.9E-14 85.5 2.8 30 259-288 29-58 (100)
5 1wgm_A Ubiquitin conjugation f 98.8 3.2E-09 1.1E-13 83.6 4.3 30 259-288 22-52 (98)
6 3ztg_A E3 ubiquitin-protein li 98.8 3E-09 1E-13 80.6 3.1 30 259-288 13-43 (92)
7 2ecj_A Tripartite motif-contai 98.8 4.2E-09 1.4E-13 72.9 3.6 30 259-288 15-44 (58)
8 1bor_A Transcription factor PM 98.7 1.9E-09 6.5E-14 76.1 1.3 29 259-287 6-34 (56)
9 2yur_A Retinoblastoma-binding 98.7 4.3E-09 1.5E-13 77.6 2.9 31 258-288 14-45 (74)
10 1t1h_A Gspef-atpub14, armadill 98.7 3.3E-09 1.1E-13 78.1 2.2 30 259-288 8-37 (78)
11 2yu4_A E3 SUMO-protein ligase 98.7 3.1E-09 1.1E-13 82.3 1.6 30 259-288 7-37 (94)
12 2ecy_A TNF receptor-associated 98.7 7.7E-09 2.6E-13 74.2 3.4 31 258-288 14-44 (66)
13 2ysl_A Tripartite motif-contai 98.7 1.2E-08 4.2E-13 73.8 4.5 31 258-288 19-49 (73)
14 2ecw_A Tripartite motif-contai 98.7 1.3E-08 4.6E-13 74.7 4.6 31 258-288 18-48 (85)
15 2egp_A Tripartite motif-contai 98.7 9E-09 3.1E-13 75.4 2.9 30 259-288 12-41 (79)
16 2d8t_A Dactylidin, ring finger 98.6 1.4E-08 4.8E-13 73.9 3.4 31 258-288 14-44 (71)
17 3fl2_A E3 ubiquitin-protein li 98.6 6.6E-09 2.3E-13 83.2 1.6 30 259-288 52-81 (124)
18 2c2l_A CHIP, carboxy terminus 98.6 5E-09 1.7E-13 91.9 0.9 31 258-288 207-237 (281)
19 4ayc_A E3 ubiquitin-protein li 98.6 8E-09 2.7E-13 84.6 1.6 29 260-288 54-82 (138)
20 2ecv_A Tripartite motif-contai 98.6 2.6E-08 8.9E-13 73.1 3.8 31 258-288 18-48 (85)
21 2djb_A Polycomb group ring fin 98.6 2.7E-08 9.2E-13 72.6 3.6 31 258-288 14-45 (72)
22 3l11_A E3 ubiquitin-protein li 98.6 1.3E-08 4.3E-13 80.4 1.9 30 259-288 15-44 (115)
23 3lrq_A E3 ubiquitin-protein li 98.6 1.2E-08 4.2E-13 79.4 1.6 30 259-288 22-52 (100)
24 1z6u_A NP95-like ring finger p 98.5 1.7E-08 6E-13 84.6 1.6 30 259-288 78-107 (150)
25 1jm7_A BRCA1, breast cancer ty 98.5 1.6E-08 5.6E-13 78.5 1.2 30 259-288 21-50 (112)
26 2ct2_A Tripartite motif protei 98.5 6.1E-08 2.1E-12 72.1 3.8 30 259-288 15-48 (88)
27 1jm7_B BARD1, BRCA1-associated 98.5 2E-08 6.7E-13 80.0 1.1 30 259-288 22-52 (117)
28 3knv_A TNF receptor-associated 98.5 2.8E-08 9.6E-13 82.7 1.7 31 258-288 30-60 (141)
29 2ckl_A Polycomb group ring fin 98.5 3.1E-08 1.1E-12 77.5 1.5 30 259-288 15-45 (108)
30 2y43_A E3 ubiquitin-protein li 98.5 3.4E-08 1.2E-12 76.0 1.6 30 259-288 22-52 (99)
31 1rmd_A RAG1; V(D)J recombinati 98.4 4.2E-08 1.4E-12 77.5 1.6 30 259-288 23-52 (116)
32 3hct_A TNF receptor-associated 98.4 5.4E-08 1.8E-12 77.5 1.7 30 259-288 18-47 (118)
33 2f42_A STIP1 homology and U-bo 98.4 5.7E-08 2E-12 84.9 1.7 31 258-288 105-135 (179)
34 1g25_A CDK-activating kinase a 98.4 4.7E-08 1.6E-12 69.8 0.6 29 260-288 4-37 (65)
35 2ea6_A Ring finger protein 4; 98.4 9.2E-08 3.1E-12 67.9 2.0 31 258-288 14-51 (69)
36 2ckl_B Ubiquitin ligase protei 98.4 7.6E-08 2.6E-12 80.5 1.4 31 258-288 53-84 (165)
37 2kiz_A E3 ubiquitin-protein li 98.3 2.5E-07 8.5E-12 66.4 3.4 32 257-288 12-46 (69)
38 2ecg_A Baculoviral IAP repeat- 98.3 1.2E-07 4E-12 70.3 1.6 30 259-288 25-55 (75)
39 3htk_C E3 SUMO-protein ligase 98.3 1.9E-07 6.4E-12 86.6 3.2 33 256-288 178-211 (267)
40 4ic3_A E3 ubiquitin-protein li 98.3 1.8E-07 6E-12 69.4 2.1 30 259-288 24-54 (74)
41 3ng2_A RNF4, snurf, ring finge 98.3 8.8E-08 3E-12 68.7 0.4 30 259-288 10-46 (71)
42 2xeu_A Ring finger protein 4; 98.3 9.7E-08 3.3E-12 66.9 -0.0 30 259-288 3-39 (64)
43 2ect_A Ring finger protein 126 98.3 3.3E-07 1.1E-11 67.2 2.6 32 257-288 13-47 (78)
44 2ecn_A Ring finger protein 141 98.3 5E-07 1.7E-11 65.0 3.4 29 259-288 15-43 (70)
45 1chc_A Equine herpes virus-1 r 98.2 2.5E-07 8.4E-12 66.1 1.5 30 259-288 5-35 (68)
46 2ea5_A Cell growth regulator w 98.2 1.1E-06 3.7E-11 64.8 3.5 30 259-288 15-45 (68)
47 2ecm_A Ring finger and CHY zin 98.1 5.5E-07 1.9E-11 61.6 1.5 29 260-288 6-38 (55)
48 1e4u_A Transcriptional repress 98.1 1.2E-06 4.1E-11 66.4 2.9 30 259-288 11-44 (78)
49 2l0b_A E3 ubiquitin-protein li 98.1 1.3E-06 4.4E-11 66.8 2.3 31 258-288 39-72 (91)
50 1wim_A KIAA0161 protein; ring 98.1 8.5E-07 2.9E-11 67.9 1.2 30 259-288 5-37 (94)
51 2ep4_A Ring finger protein 24; 98.0 2.3E-06 8E-11 62.1 3.1 31 258-288 14-47 (74)
52 2yho_A E3 ubiquitin-protein li 98.0 1.4E-06 5E-11 65.7 2.0 29 260-288 19-48 (79)
53 1v87_A Deltex protein 2; ring- 98.0 1.5E-06 5.2E-11 68.0 1.9 29 260-288 26-72 (114)
54 1x4j_A Ring finger protein 38; 98.0 1.6E-06 5.4E-11 63.4 1.3 30 259-288 23-55 (75)
55 2bay_A PRE-mRNA splicing facto 97.9 2.2E-06 7.6E-11 62.3 1.3 31 258-288 2-33 (61)
56 1iym_A EL5; ring-H2 finger, ub 97.9 2.8E-06 9.7E-11 58.2 1.6 29 260-288 6-38 (55)
57 2y1n_A E3 ubiquitin-protein li 97.9 3.6E-06 1.2E-10 81.4 1.7 29 259-287 332-360 (389)
58 2vje_B MDM4 protein; proto-onc 97.8 3.1E-06 1.1E-10 61.1 0.3 31 258-288 6-39 (63)
59 3t6p_A Baculoviral IAP repeat- 97.7 6.9E-06 2.4E-10 77.8 1.3 30 259-288 295-325 (345)
60 4ap4_A E3 ubiquitin ligase RNF 97.6 1E-05 3.5E-10 63.4 0.3 30 259-288 72-108 (133)
61 2vje_A E3 ubiquitin-protein li 97.5 1.7E-05 5.8E-10 57.4 0.4 29 260-288 9-40 (64)
62 2ecl_A Ring-box protein 2; RNF 97.4 4.6E-05 1.6E-09 57.2 1.8 28 261-288 17-59 (81)
63 3dpl_R Ring-box protein 1; ubi 97.0 0.00018 6.2E-09 57.4 1.7 28 261-288 39-84 (106)
64 1m9o_A Tristetraproline; Cys3H 97.0 0.00024 8.1E-09 52.6 1.8 32 184-215 9-40 (77)
65 1m9o_A Tristetraproline; Cys3H 96.6 0.0003 1E-08 52.0 0.0 28 185-212 48-75 (77)
66 4a0k_B E3 ubiquitin-protein li 96.2 0.00074 2.5E-08 55.2 0.0 28 261-288 50-95 (117)
67 2cqe_A KIAA1064 protein; CCCH 95.8 0.0018 6E-08 51.3 0.2 27 187-213 36-62 (98)
68 2cqe_A KIAA1064 protein; CCCH 95.7 0.0037 1.3E-07 49.4 1.7 26 184-210 10-35 (98)
69 2d9m_A Zinc finger CCCH-type d 95.5 0.0017 5.8E-08 49.3 -0.9 38 188-233 21-58 (69)
70 2d8s_A Cellular modulator of i 95.4 0.0088 3E-07 45.3 2.9 29 260-288 16-51 (80)
71 2rhk_C Cleavage and polyadenyl 94.7 0.0036 1.2E-07 46.9 -1.0 28 185-213 14-41 (72)
72 2d9n_A Cleavage and polyadenyl 94.6 0.0051 1.7E-07 46.3 -0.4 28 185-213 8-35 (77)
73 3d2q_A Muscleblind-like protei 93.3 0.012 4.1E-07 43.5 -0.5 26 187-213 6-32 (70)
74 2rpp_A Muscleblind-like protei 90.7 0.066 2.3E-06 41.9 0.9 40 166-214 4-44 (89)
75 3u9g_A Zinc finger CCCH-type a 89.6 0.093 3.2E-06 47.7 1.1 29 187-215 151-182 (229)
76 2fc6_A Nuclear, target of EGR1 89.6 0.055 1.9E-06 38.7 -0.3 28 187-214 20-47 (50)
77 3d2n_A Muscleblind-like protei 89.5 0.12 4E-06 39.8 1.4 26 187-213 9-35 (83)
78 2jun_A Midline-1; B-BOX, TRIM, 88.5 0.12 4.2E-06 39.2 0.9 21 268-288 13-35 (101)
79 2d9n_A Cleavage and polyadenyl 88.4 0.064 2.2E-06 40.2 -0.8 24 189-213 40-63 (77)
80 2e5s_A Otthump00000018578; ZF- 86.9 0.057 1.9E-06 42.7 -2.0 25 188-213 21-46 (98)
81 3d2q_A Muscleblind-like protei 85.8 0.12 4.1E-06 38.1 -0.6 24 188-213 43-66 (70)
82 2rhk_C Cleavage and polyadenyl 81.8 0.19 6.4E-06 37.5 -1.0 24 189-213 46-69 (72)
83 2e5s_A Otthump00000018578; ZF- 81.3 0.21 7.2E-06 39.4 -0.9 23 189-213 58-80 (98)
84 3k1l_B Fancl; UBC, ring, RWD, 78.6 0.91 3.1E-05 44.0 2.3 33 256-288 305-345 (381)
85 3mjh_B Early endosome antigen 75.5 0.68 2.3E-05 30.5 0.4 16 259-274 5-20 (34)
86 1joc_A EEA1, early endosomal a 68.0 1.7 5.9E-05 35.3 1.2 28 260-287 70-101 (125)
87 3t7l_A Zinc finger FYVE domain 63.7 2.4 8.3E-05 32.5 1.2 29 259-287 20-52 (90)
88 2m0d_A Zinc finger and BTB dom 63.2 2.3 7.9E-05 23.2 0.8 16 258-273 2-17 (30)
89 1vyx_A ORF K3, K3RING; zinc-bi 61.6 4.3 0.00015 28.8 2.2 28 260-287 7-39 (60)
90 1p7a_A BF3, BKLF, kruppel-like 61.6 3 0.0001 24.4 1.1 16 257-272 9-24 (37)
91 2kvh_A Zinc finger and BTB dom 61.2 2.6 8.8E-05 23.0 0.8 15 258-272 2-16 (27)
92 3u1l_A PRE-mRNA-splicing facto 60.8 1.3 4.5E-05 39.8 -0.8 25 187-212 70-94 (240)
93 1z2q_A LM5-1; membrane protein 60.0 3.8 0.00013 30.9 1.7 29 259-287 21-53 (84)
94 1znf_A 31ST zinc finger from X 59.8 2.7 9.2E-05 22.6 0.7 14 259-272 1-14 (27)
95 2m0e_A Zinc finger and BTB dom 59.8 3.3 0.00011 22.3 1.0 15 259-273 2-16 (29)
96 1ard_A Yeast transcription fac 59.5 3.3 0.00011 22.5 1.0 14 259-272 2-15 (29)
97 1vfy_A Phosphatidylinositol-3- 59.1 3.3 0.00011 30.4 1.2 27 261-287 13-43 (73)
98 2yw8_A RUN and FYVE domain-con 59.0 4 0.00014 30.6 1.7 28 260-287 20-51 (82)
99 3zyq_A Hepatocyte growth facto 58.1 2.7 9.4E-05 36.9 0.8 27 261-287 166-196 (226)
100 1rik_A E6APC1 peptide; E6-bind 58.0 3.4 0.00012 22.5 0.9 14 259-272 2-15 (29)
101 2kvg_A Zinc finger and BTB dom 57.8 2.9 9.8E-05 23.0 0.6 15 258-272 2-16 (27)
102 2kvf_A Zinc finger and BTB dom 57.7 3.3 0.00011 22.5 0.8 15 258-272 2-16 (28)
103 1z60_A TFIIH basal transcripti 57.7 4.1 0.00014 29.6 1.5 27 261-287 17-46 (59)
104 2m0f_A Zinc finger and BTB dom 57.6 2.9 9.9E-05 22.6 0.5 15 259-273 2-16 (29)
105 1x4u_A Zinc finger, FYVE domai 57.4 3.7 0.00013 30.8 1.3 29 259-287 14-46 (84)
106 1dvp_A HRS, hepatocyte growth 57.4 2.7 9.4E-05 36.5 0.6 27 261-287 163-193 (220)
107 2lvu_A Zinc finger and BTB dom 61.8 2.2 7.7E-05 23.0 0.0 15 259-273 2-16 (26)
108 1klr_A Zinc finger Y-chromosom 56.9 4.1 0.00014 22.1 1.1 14 259-272 2-15 (30)
109 1paa_A Yeast transcription fac 56.5 4 0.00014 22.4 1.1 14 259-272 2-15 (30)
110 2elt_A Zinc finger protein 406 56.4 3.7 0.00013 23.7 0.9 16 257-272 7-22 (36)
111 2elq_A Zinc finger protein 406 56.2 3.9 0.00013 23.8 1.0 16 257-272 7-22 (36)
112 1y02_A CARP2, FYVE-ring finger 55.9 3.6 0.00012 33.6 1.1 28 260-287 20-51 (120)
113 2elr_A Zinc finger protein 406 55.8 4.1 0.00014 23.5 1.1 16 257-272 7-22 (36)
114 3mpx_A FYVE, rhogef and PH dom 55.6 2.5 8.4E-05 39.4 0.0 29 259-287 375-407 (434)
115 2lvt_A Zinc finger and BTB dom 60.0 2.5 8.7E-05 23.2 0.0 15 259-273 2-16 (29)
116 1wfk_A Zinc finger, FYVE domai 54.9 2.7 9.4E-05 32.2 0.2 28 260-287 10-41 (88)
117 2elp_A Zinc finger protein 406 54.4 4.8 0.00017 23.5 1.2 16 257-272 7-22 (37)
118 2elx_A Zinc finger protein 406 54.2 4.3 0.00015 23.2 0.9 15 258-272 6-20 (35)
119 2lvr_A Zinc finger and BTB dom 59.3 2.7 9.1E-05 23.1 0.0 16 258-273 2-17 (30)
120 2els_A Zinc finger protein 406 53.8 4 0.00014 23.8 0.8 16 257-272 7-22 (36)
121 2cs3_A Protein C14ORF4, MY039 53.6 4.5 0.00016 31.8 1.2 32 256-287 12-47 (93)
122 2elv_A Zinc finger protein 406 52.9 4.6 0.00016 23.5 0.9 16 257-272 7-22 (36)
123 3m62_A Ubiquitin conjugation f 52.8 4.8 0.00017 43.1 1.7 29 259-287 891-920 (968)
124 1srk_A Zinc finger protein ZFP 52.8 4.7 0.00016 23.2 0.9 16 257-272 5-20 (35)
125 2elo_A Zinc finger protein 406 51.3 4.7 0.00016 23.5 0.8 16 257-272 7-22 (37)
126 1wew_A DNA-binding family prot 51.1 13 0.00044 27.5 3.4 10 278-287 62-71 (78)
127 2yte_A Zinc finger protein 473 50.8 5.7 0.00019 23.8 1.1 16 257-272 8-23 (42)
128 2yu5_A Zinc finger protein 473 49.9 6.3 0.00021 24.0 1.3 17 257-273 10-26 (44)
129 1wd2_A Ariadne-1 protein homol 48.6 3.1 0.00011 29.9 -0.4 27 261-287 8-42 (60)
130 2ytb_A Zinc finger protein 32; 48.0 6.3 0.00021 23.6 1.0 16 257-272 9-24 (42)
131 2en3_A ZFP-95, zinc finger pro 47.9 7 0.00024 24.1 1.3 17 257-273 10-26 (46)
132 3d2n_A Muscleblind-like protei 47.9 2.9 0.0001 31.9 -0.7 23 189-213 45-67 (83)
133 2enh_A Zinc finger protein 28 47.6 8 0.00027 23.9 1.5 17 257-273 10-26 (46)
134 2eos_A B-cell lymphoma 6 prote 46.6 7 0.00024 23.6 1.1 16 257-272 9-24 (42)
135 2eoj_A Zinc finger protein 268 46.1 6.1 0.00021 24.0 0.8 15 258-272 11-25 (44)
136 2en7_A Zinc finger protein 268 46.0 7 0.00024 23.7 1.0 16 257-272 10-25 (44)
137 1njq_A Superman protein; zinc- 45.9 6.2 0.00021 23.5 0.7 15 258-272 5-19 (39)
138 2enf_A Zinc finger protein 347 45.9 7.7 0.00026 23.9 1.2 16 257-272 10-25 (46)
139 2eoy_A Zinc finger protein 473 45.8 7.7 0.00026 24.0 1.2 16 257-272 10-25 (46)
140 2yth_A Zinc finger protein 224 45.7 7.5 0.00026 24.0 1.2 16 257-272 10-25 (46)
141 2elm_A Zinc finger protein 406 45.6 5.2 0.00018 23.7 0.3 15 258-272 8-22 (37)
142 1rim_A E6APC2 peptide; E6-bind 45.5 7.1 0.00024 22.6 1.0 14 259-272 2-15 (33)
143 2epv_A Zinc finger protein 268 45.4 6.9 0.00024 24.0 0.9 16 257-272 10-25 (44)
144 2epc_A Zinc finger protein 32; 45.3 6.7 0.00023 23.5 0.8 16 257-272 9-24 (42)
145 2eon_A ZFP-95, zinc finger pro 45.0 7.8 0.00027 24.0 1.2 16 257-272 10-25 (46)
146 2ept_A Zinc finger protein 32; 45.0 7.1 0.00024 23.4 0.9 16 257-272 8-23 (41)
147 2eov_A Zinc finger protein 484 44.7 8 0.00027 23.7 1.2 16 257-272 10-25 (46)
148 2emg_A Zinc finger protein 484 44.3 8.1 0.00028 23.8 1.1 16 257-272 10-25 (46)
149 2eox_A Zinc finger protein 473 44.2 7.7 0.00026 23.6 1.0 17 257-273 10-26 (44)
150 3iuf_A Zinc finger protein UBI 43.9 6.9 0.00023 25.0 0.8 17 257-273 5-21 (48)
151 2eof_A Zinc finger protein 268 43.6 7.8 0.00027 23.4 1.0 16 257-272 10-25 (44)
152 2eow_A Zinc finger protein 347 43.6 7.6 0.00026 23.8 0.9 16 257-272 10-25 (46)
153 2em3_A Zinc finger protein 28 43.5 7.2 0.00024 24.0 0.8 16 257-272 10-25 (46)
154 2el5_A Zinc finger protein 268 43.5 8.5 0.00029 23.1 1.1 16 257-272 8-23 (42)
155 2eom_A ZFP-95, zinc finger pro 43.4 8.7 0.0003 23.8 1.2 16 257-272 10-25 (46)
156 2emi_A Zinc finger protein 484 43.4 7.5 0.00026 23.9 0.9 16 257-272 10-25 (46)
157 2em6_A Zinc finger protein 224 43.4 8.8 0.0003 23.7 1.2 16 257-272 10-25 (46)
158 2ytf_A Zinc finger protein 268 43.3 7.8 0.00027 23.8 0.9 16 257-272 10-25 (46)
159 2eq1_A Zinc finger protein 347 43.3 8.3 0.00028 23.7 1.1 16 257-272 10-25 (46)
160 2ytg_A ZFP-95, zinc finger pro 43.2 8.9 0.0003 23.6 1.2 17 257-273 10-26 (46)
161 1zbd_B Rabphilin-3A; G protein 43.2 5 0.00017 33.2 -0.0 28 260-287 56-88 (134)
162 2yts_A Zinc finger protein 484 43.1 7.4 0.00025 23.9 0.8 16 257-272 10-25 (46)
163 2eop_A Zinc finger protein 268 42.9 9 0.00031 23.4 1.2 16 257-272 10-25 (46)
164 2eq2_A Zinc finger protein 347 42.9 8.1 0.00028 23.8 1.0 16 257-272 10-25 (46)
165 2yti_A Zinc finger protein 347 42.8 8.2 0.00028 23.7 1.0 16 257-272 10-25 (46)
166 2emb_A Zinc finger protein 473 42.6 8.4 0.00029 23.4 1.0 16 257-272 10-25 (44)
167 2ely_A Zinc finger protein 224 42.3 11 0.00037 23.2 1.5 16 257-272 10-25 (46)
168 2emk_A Zinc finger protein 28 42.3 9.2 0.00031 23.6 1.2 16 257-272 10-25 (46)
169 2en9_A Zinc finger protein 28 42.3 8.8 0.0003 23.6 1.1 16 257-272 10-25 (46)
170 1fv5_A First zinc finger of U- 42.0 7.5 0.00026 24.7 0.7 16 257-272 6-21 (36)
171 2epw_A Zinc finger protein 268 42.0 9.8 0.00034 23.3 1.3 16 257-272 10-25 (46)
172 2eq3_A Zinc finger protein 347 41.9 7.8 0.00027 23.7 0.8 16 257-272 10-25 (46)
173 2yto_A Zinc finger protein 484 41.9 8.2 0.00028 23.8 0.9 16 257-272 10-25 (46)
174 2eq4_A Zinc finger protein 224 41.6 9.9 0.00034 23.2 1.2 16 257-272 10-25 (46)
175 2ytp_A Zinc finger protein 484 41.4 8.6 0.0003 23.7 0.9 16 257-272 10-25 (46)
176 2ep1_A Zinc finger protein 484 41.4 9.2 0.00031 23.4 1.1 16 257-272 10-25 (46)
177 2zet_C Melanophilin; complex, 41.4 8.4 0.00029 32.5 1.1 27 260-286 69-100 (153)
178 2eoh_A Zinc finger protein 28 41.3 9.4 0.00032 23.5 1.1 16 257-272 10-25 (46)
179 2emz_A ZFP-95, zinc finger pro 41.1 11 0.00037 23.2 1.4 16 257-272 10-25 (46)
180 2eoq_A Zinc finger protein 224 41.0 9.4 0.00032 23.4 1.0 16 257-272 10-25 (46)
181 2em0_A Zinc finger protein 224 40.9 9.9 0.00034 23.3 1.1 16 257-272 10-25 (46)
182 2emj_A Zinc finger protein 28 40.9 8.9 0.0003 23.6 0.9 16 257-272 10-25 (46)
183 2eq0_A Zinc finger protein 347 40.8 8.9 0.0003 23.6 0.9 16 257-272 10-25 (46)
184 2ytn_A Zinc finger protein 347 40.8 10 0.00035 23.2 1.2 16 257-272 10-25 (46)
185 2eoo_A ZFP-95, zinc finger pro 40.7 9 0.00031 23.6 0.9 16 257-272 10-25 (46)
186 2yrj_A Zinc finger protein 473 40.6 9.1 0.00031 23.4 0.9 16 257-272 10-25 (46)
187 2em4_A Zinc finger protein 28 40.6 9 0.00031 23.6 0.9 16 257-272 10-25 (46)
188 2elz_A Zinc finger protein 224 40.5 11 0.00036 23.3 1.2 16 257-272 10-25 (46)
189 2eoz_A Zinc finger protein 473 40.5 7.9 0.00027 23.9 0.6 16 257-272 10-25 (46)
190 2ep2_A Zinc finger protein 484 40.4 9.2 0.00031 23.5 0.9 16 257-272 10-25 (46)
191 2epz_A Zinc finger protein 28 40.3 10 0.00035 23.2 1.2 16 257-272 10-25 (46)
192 2en8_A Zinc finger protein 224 40.2 9.3 0.00032 23.4 0.9 16 257-272 10-25 (46)
193 2eou_A Zinc finger protein 473 40.2 9.7 0.00033 23.2 1.0 16 257-272 10-25 (44)
194 2emy_A Zinc finger protein 268 40.1 8.8 0.0003 23.6 0.8 16 257-272 10-25 (46)
195 2ytr_A Zinc finger protein 347 40.1 9.3 0.00032 23.4 0.9 16 257-272 10-25 (46)
196 2yu8_A Zinc finger protein 347 40.1 11 0.00038 23.1 1.3 16 257-272 10-25 (46)
197 2ytq_A Zinc finger protein 268 40.0 11 0.00038 23.2 1.3 16 257-272 10-25 (46)
198 2en2_A B-cell lymphoma 6 prote 39.9 9 0.00031 23.0 0.8 16 257-272 9-24 (42)
199 2emm_A ZFP-95, zinc finger pro 39.8 9.5 0.00033 23.3 0.9 16 257-272 10-25 (46)
200 2emh_A Zinc finger protein 484 39.8 9.4 0.00032 23.4 0.9 16 257-272 10-25 (46)
201 2emp_A Zinc finger protein 347 39.7 9.8 0.00034 23.3 1.0 16 257-272 10-25 (46)
202 2ytm_A Zinc finger protein 28 39.7 10 0.00034 23.5 1.0 16 257-272 10-25 (46)
203 2eml_A Zinc finger protein 28 39.6 9.4 0.00032 23.4 0.9 16 257-272 10-25 (46)
204 2em8_A Zinc finger protein 224 39.3 9.5 0.00033 23.5 0.9 16 257-272 10-25 (46)
205 2ep3_A Zinc finger protein 484 39.2 9.8 0.00034 23.3 0.9 16 257-272 10-25 (46)
206 2emx_A Zinc finger protein 268 39.2 9.6 0.00033 23.2 0.9 16 257-272 8-23 (44)
207 2em5_A ZFP-95, zinc finger pro 39.1 9.6 0.00033 23.5 0.9 16 257-272 10-25 (46)
208 2emf_A Zinc finger protein 484 39.1 9.6 0.00033 23.5 0.9 16 257-272 10-25 (46)
209 2ene_A Zinc finger protein 347 38.9 9.9 0.00034 23.3 0.9 16 257-272 10-25 (46)
210 2enc_A Zinc finger protein 224 38.8 10 0.00034 23.3 0.9 16 257-272 10-25 (46)
211 2em2_A Zinc finger protein 28 38.8 10 0.00034 23.4 0.9 16 257-272 10-25 (46)
212 2epu_A Zinc finger protein 32; 38.8 8.7 0.0003 23.6 0.6 16 257-272 10-25 (45)
213 2eme_A Zinc finger protein 473 38.7 10 0.00035 23.2 0.9 16 257-272 10-25 (46)
214 2epx_A Zinc finger protein 28 38.6 13 0.00044 22.7 1.4 16 257-272 10-25 (47)
215 2em7_A Zinc finger protein 224 38.3 11 0.00036 23.2 1.0 16 257-272 10-25 (46)
216 2em9_A Zinc finger protein 224 38.2 10 0.00036 23.1 0.9 16 257-272 10-25 (46)
217 2el4_A Zinc finger protein 268 38.1 10 0.00036 23.1 0.9 16 257-272 10-25 (46)
218 2ema_A Zinc finger protein 347 37.8 10 0.00035 23.3 0.8 16 257-272 10-25 (46)
219 2eor_A Zinc finger protein 224 37.8 11 0.00036 23.1 0.9 16 257-272 10-25 (46)
220 4gzn_C ZFP-57, zinc finger pro 37.4 9.8 0.00033 26.5 0.8 15 258-272 3-17 (60)
221 2ytk_A Zinc finger protein 347 37.1 11 0.00036 23.2 0.8 16 257-272 10-25 (46)
222 2eoe_A Zinc finger protein 347 37.1 10 0.00035 23.2 0.8 16 257-272 10-25 (46)
223 2ysp_A Zinc finger protein 224 37.0 9.9 0.00034 23.3 0.7 16 257-272 10-25 (46)
224 2el6_A Zinc finger protein 268 37.0 11 0.00038 23.2 0.9 16 257-272 10-25 (46)
225 2ytt_A Zinc finger protein 473 36.7 12 0.0004 23.0 1.0 16 257-272 10-25 (46)
226 1bbo_A Human enhancer-binding 36.5 11 0.00036 24.1 0.8 14 259-272 1-14 (57)
227 2ytj_A Zinc finger protein 484 36.2 11 0.00037 23.1 0.8 16 257-272 10-25 (46)
228 2kfq_A FP1; protein, de novo p 36.0 8.6 0.00029 22.0 0.2 14 259-272 2-15 (32)
229 2ytd_A Zinc finger protein 473 35.9 12 0.00041 22.9 0.9 16 257-272 10-25 (46)
230 2yrm_A B-cell lymphoma 6 prote 35.3 13 0.00045 22.6 1.1 16 257-272 8-23 (43)
231 2ep0_A Zinc finger protein 28 35.3 12 0.00042 22.9 0.9 16 257-272 10-25 (46)
232 1zfd_A SWI5; DNA binding motif 35.0 16 0.00056 20.3 1.4 15 258-272 2-18 (32)
233 2l4z_A DNA endonuclease RBBP8, 34.9 16 0.00054 29.0 1.7 30 259-288 88-120 (123)
234 2yso_A ZFP-95, zinc finger pro 34.8 13 0.00043 22.8 0.9 16 257-272 10-25 (46)
235 2en1_A Zinc finger protein 224 34.7 11 0.00039 23.0 0.7 16 257-272 10-25 (46)
236 2epq_A POZ-, at HOOK-, and zin 34.6 12 0.00041 22.9 0.8 16 257-272 8-23 (45)
237 2en6_A Zinc finger protein 268 34.5 11 0.00037 23.1 0.6 16 257-272 10-25 (46)
238 1wff_A Riken cDNA 2810002D23 p 34.5 19 0.00064 28.1 2.0 28 257-284 23-52 (85)
239 1wig_A KIAA1808 protein; LIM d 34.0 10 0.00036 26.9 0.5 30 259-288 31-62 (73)
240 2d8x_A Protein pinch; LIM doma 33.6 14 0.00046 25.7 1.0 30 259-288 31-61 (70)
241 2epp_A POZ-, at HOOK-, and zin 33.5 16 0.00055 26.1 1.4 17 256-272 10-26 (66)
242 2pv0_B DNA (cytosine-5)-methyl 33.4 19 0.00065 34.8 2.3 31 258-288 92-124 (386)
243 2ct0_A Non-SMC element 1 homol 32.7 26 0.00087 26.0 2.4 29 259-287 15-44 (74)
244 3uk3_C Zinc finger protein 217 32.5 13 0.00045 23.6 0.7 14 258-271 3-16 (57)
245 1sp2_A SP1F2; zinc finger, tra 32.4 14 0.00048 20.5 0.8 14 259-272 2-17 (31)
246 1yui_A GAGA-factor; complex (D 32.0 16 0.00053 23.5 1.0 16 257-272 22-37 (54)
247 2drp_A Protein (tramtrack DNA- 31.9 15 0.0005 24.2 0.9 15 258-272 39-53 (66)
248 2adr_A ADR1; transcription reg 30.7 15 0.00052 23.6 0.8 13 259-271 2-14 (60)
249 2jmo_A Parkin; IBR, E3 ligase, 30.5 9.6 0.00033 28.4 -0.2 29 259-287 25-66 (80)
250 1nyp_A Pinch protein; LIM doma 30.2 17 0.00058 24.9 1.0 29 259-287 31-60 (66)
251 2ct7_A Ring finger protein 31; 30.0 13 0.00043 27.9 0.3 26 262-287 28-59 (86)
252 2epr_A POZ-, at HOOK-, and zin 29.6 17 0.00057 22.7 0.8 17 256-272 9-25 (48)
253 2ct1_A Transcriptional repress 29.2 18 0.0006 24.7 1.0 15 257-271 13-27 (77)
254 1wyh_A SLIM 2, skeletal muscle 29.1 19 0.00065 24.9 1.1 29 259-287 33-62 (72)
255 2eps_A POZ-, at HOOK-, and zin 29.1 22 0.00076 22.8 1.4 13 258-270 40-52 (54)
256 1x64_A Alpha-actinin-2 associa 29.1 17 0.0006 26.5 1.0 30 259-288 51-81 (89)
257 1x4l_A Skeletal muscle LIM-pro 28.9 27 0.00092 24.3 1.9 30 259-288 35-65 (72)
258 3c5k_A HD6, histone deacetylas 28.5 18 0.00063 28.7 1.1 26 258-283 23-48 (109)
259 1x6e_A Zinc finger protein 24; 28.3 18 0.00062 24.4 0.9 15 257-271 12-26 (72)
260 2dar_A PDZ and LIM domain prot 28.3 26 0.00088 25.7 1.8 30 259-288 51-81 (90)
261 2vrw_B P95VAV, VAV1, proto-onc 28.3 22 0.00074 32.9 1.7 33 257-289 355-392 (406)
262 2ko5_A Ring finger protein Z; 28.1 26 0.00089 28.1 1.9 29 258-287 27-55 (99)
263 2d8z_A Four and A half LIM dom 26.9 28 0.00096 23.9 1.7 29 259-287 31-60 (70)
264 1wfp_A Zinc finger (AN1-like) 26.6 94 0.0032 23.6 4.7 29 256-284 22-51 (74)
265 2d8v_A Zinc finger FYVE domain 26.5 26 0.00089 26.3 1.5 30 256-287 6-36 (67)
266 1x61_A Thyroid receptor intera 26.3 31 0.0011 23.9 1.9 30 259-288 33-63 (72)
267 2ab3_A ZNF29; zinc finger prot 26.0 16 0.00056 19.4 0.3 14 259-272 2-17 (29)
268 2lce_A B-cell lymphoma 6 prote 25.7 30 0.001 23.3 1.7 16 256-271 14-29 (74)
269 1wfl_A Zinc finger protein 216 25.7 72 0.0025 24.2 3.9 27 258-284 24-51 (74)
270 2d9h_A Zinc finger protein 692 25.4 22 0.00074 24.2 0.9 14 258-271 6-19 (78)
271 2eln_A Zinc finger protein 406 25.3 22 0.00075 22.5 0.8 16 257-272 7-24 (38)
272 1x5w_A Zinc finger protein 64, 25.2 29 0.00099 23.1 1.5 15 257-271 7-21 (70)
273 1f2i_G Fusion of N-terminal 17 25.1 23 0.00079 23.7 1.0 15 258-272 48-62 (73)
274 1va1_A Transcription factor SP 25.0 24 0.00082 20.6 0.9 16 257-272 6-23 (37)
275 2cor_A Pinch protein; LIM doma 24.7 26 0.00088 25.2 1.2 30 259-288 41-70 (79)
276 3a1b_A DNA (cytosine-5)-methyl 24.6 26 0.00089 30.0 1.4 33 256-288 76-110 (159)
277 1wfh_A Zinc finger (AN1-like) 24.4 50 0.0017 24.4 2.7 29 256-284 12-41 (64)
278 1wem_A Death associated transc 23.8 65 0.0022 23.2 3.3 12 259-271 16-27 (76)
279 2rsd_A E3 SUMO-protein ligase 23.8 47 0.0016 23.7 2.5 9 279-287 56-64 (68)
280 2jvx_A NF-kappa-B essential mo 23.4 21 0.00071 22.4 0.4 14 259-272 3-16 (28)
281 2d8y_A Eplin protein; LIM doma 23.3 36 0.0012 24.9 1.8 29 259-287 42-71 (91)
282 1x4w_A Hypothetical protein FL 23.1 17 0.00059 27.1 -0.0 28 257-284 13-44 (67)
283 1x3h_A Leupaxin; paxillin fami 23.1 36 0.0012 24.0 1.7 29 259-287 41-70 (80)
284 1vd4_A Transcription initiatio 23.1 23 0.00078 23.7 0.6 14 258-271 38-51 (62)
285 1wen_A Inhibitor of growth fam 23.0 53 0.0018 24.0 2.7 10 278-287 55-64 (71)
286 1wg2_A Zinc finger (AN1-like) 22.8 49 0.0017 24.5 2.4 27 258-284 14-41 (64)
287 2cot_A Zinc finger protein 435 22.6 30 0.001 23.5 1.2 17 256-272 15-31 (77)
288 2egq_A FHL1 protein; LIM domai 22.6 29 0.001 24.3 1.1 30 259-288 46-76 (77)
289 1llm_C Chimera of ZIF23-GCN4; 22.5 26 0.00088 24.5 0.8 14 258-271 2-15 (88)
290 2kmk_A Zinc finger protein GFI 22.3 23 0.00079 23.8 0.5 13 259-271 1-13 (82)
291 3v33_A Ribonuclease ZC3H12A; r 22.1 19 0.00064 32.4 0.0 47 161-211 166-213 (223)
292 3d00_A Tungsten formylmethanof 21.6 25 0.00087 30.4 0.7 25 259-288 163-187 (191)
293 2cur_A Skeletal muscle LIM-pro 21.2 41 0.0014 23.0 1.7 30 259-288 31-61 (69)
294 1x6a_A LIMK-2, LIM domain kina 21.0 46 0.0016 23.6 1.9 30 259-288 41-73 (81)
295 1x63_A Skeletal muscle LIM-pro 20.7 33 0.0011 24.3 1.1 29 259-287 43-72 (82)
296 2l3k_A Rhombotin-2, linker, LI 20.6 36 0.0012 26.4 1.4 29 259-287 36-66 (123)
297 1x62_A C-terminal LIM domain p 20.6 21 0.0007 25.5 -0.1 29 259-287 41-70 (79)
298 1g47_A Pinch protein; LIM doma 20.6 26 0.00088 24.5 0.5 29 259-287 39-68 (77)
299 1aww_A ATK, AMGX1, BPK, bruton 20.5 41 0.0014 23.1 1.5 20 169-188 1-20 (67)
300 2cuq_A Four and A half LIM dom 20.5 46 0.0016 23.4 1.8 30 259-288 41-71 (80)
301 2k16_A Transcription initiatio 20.2 33 0.0011 24.7 1.0 11 278-288 58-68 (75)
No 1
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=4.4e-10 Score=83.74 Aligned_cols=34 Identities=68% Similarity=1.572 Sum_probs=30.4
Q ss_pred CCCCceeccccccccCCceecCCCChhhHHhHhc
Q 023002 255 EDSLPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 255 e~~~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
+....+.|+||++.|.+||++.|||.||..||.+
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 44 (81)
T 2csy_A 11 EEEIPFRCFICRQAFQNPVVTKCRHYFCESCALE 44 (81)
T ss_dssp CCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHH
T ss_pred cCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHH
Confidence 3445789999999999999999999999999964
No 2
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.87 E-value=7.6e-10 Score=84.68 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=28.3
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.|.|+||++.|++||++.|||.||..||.+
T Consensus 14 ~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~ 43 (85)
T 2kr4_A 14 EFRDPLMDTLMTDPVRLPSGTVMDRSIILR 43 (85)
T ss_dssp TTBCTTTCSBCSSEEECTTSCEEEHHHHHH
T ss_pred heECcccCchhcCCeECCCCCEECHHHHHH
Confidence 499999999999999999999999999964
No 3
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=3.9e-09 Score=74.90 Aligned_cols=31 Identities=32% Similarity=0.742 Sum_probs=28.6
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++.|||.||..||.+
T Consensus 19 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 49 (63)
T 2ysj_A 19 EEVICPICLDILQKPVTIDCGHNFCLKCITQ 49 (63)
T ss_dssp CCCBCTTTCSBCSSCEECTTSSEECHHHHHH
T ss_pred cCCCCCcCCchhCCeEEeCCCCcchHHHHHH
Confidence 3579999999999999999999999999964
No 4
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.80 E-value=1.7e-09 Score=85.51 Aligned_cols=30 Identities=17% Similarity=0.147 Sum_probs=28.3
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.|.||||++.|+|||+++|||.||..||.+
T Consensus 29 ~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~ 58 (100)
T 2kre_A 29 EFRDPLMDTLMTDPVRLPSGTIMDRSIILR 58 (100)
T ss_dssp TTBCTTTCSBCSSEEEETTTEEEEHHHHHH
T ss_pred hhCCcCccCcccCCeECCCCCEEchHHHHH
Confidence 499999999999999999999999999964
No 5
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.79 E-value=3.2e-09 Score=83.64 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=28.3
Q ss_pred ceeccccccccCCceecCCC-ChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCK-HYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CG-H~FC~~Ci~~ 288 (289)
.|.|+||++.|+|||++.|| |.||..||.+
T Consensus 22 ~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~ 52 (98)
T 1wgm_A 22 EFLDPIMSTLMCDPVVLPSSRVTVDRSTIAR 52 (98)
T ss_dssp TTBCTTTCSBCSSEEECTTTCCEEEHHHHHH
T ss_pred hcCCcCccccccCCeECCCCCeEECHHHHHH
Confidence 49999999999999999999 9999999964
No 6
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.76 E-value=3e-09 Score=80.60 Aligned_cols=30 Identities=30% Similarity=0.889 Sum_probs=28.1
Q ss_pred ceeccccccccCCceecC-CCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTK-CKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~-CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||+++ |||.||..||..
T Consensus 13 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 43 (92)
T 3ztg_A 13 ELLCLICKDIMTDAVVIPCCGNSYCDECIRT 43 (92)
T ss_dssp TTEETTTTEECSSCEECTTTCCEECHHHHHH
T ss_pred CCCCCCCChhhcCceECCCCCCHHHHHHHHH
Confidence 589999999999999999 999999999963
No 7
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=4.2e-09 Score=72.94 Aligned_cols=30 Identities=30% Similarity=0.902 Sum_probs=28.1
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++.|||.||..||.+
T Consensus 15 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 44 (58)
T 2ecj_A 15 EASCSVCLEYLKEPVIIECGHNFCKACITR 44 (58)
T ss_dssp CCBCSSSCCBCSSCCCCSSCCCCCHHHHHH
T ss_pred CCCCccCCcccCccEeCCCCCccCHHHHHH
Confidence 578999999999999999999999999964
No 8
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.74 E-value=1.9e-09 Score=76.10 Aligned_cols=29 Identities=24% Similarity=0.559 Sum_probs=27.3
Q ss_pred ceeccccccccCCceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~ 287 (289)
.+.|+||++.|.+|++++|||.||..|+.
T Consensus 6 ~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~ 34 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLLPCLHTLCSGCLE 34 (56)
T ss_dssp CSSCSSSCSSCBCCSCSTTSCCSBTTTCS
T ss_pred CCCceEeCCccCCeEEcCCCCcccHHHHc
Confidence 47899999999999999999999999985
No 9
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.73 E-value=4.3e-09 Score=77.57 Aligned_cols=31 Identities=29% Similarity=0.818 Sum_probs=28.6
Q ss_pred CceeccccccccCCceecC-CCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTK-CKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~-CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||+++ |||.||..||.+
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 45 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRT 45 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHH
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHH
Confidence 4689999999999999999 999999999964
No 10
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.72 E-value=3.3e-09 Score=78.10 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=28.2
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.|.|+||++.|.+||++.|||.||..||.+
T Consensus 8 ~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~ 37 (78)
T 1t1h_A 8 YFRCPISLELMKDPVIVSTGQTYERSSIQK 37 (78)
T ss_dssp SSSCTTTSCCCSSEEEETTTEEEEHHHHHH
T ss_pred cCCCCCccccccCCEEcCCCCeecHHHHHH
Confidence 589999999999999999999999999964
No 11
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=3.1e-09 Score=82.34 Aligned_cols=30 Identities=30% Similarity=0.654 Sum_probs=27.9
Q ss_pred ceeccccccccCCceecC-CCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTK-CKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~-CGH~FC~~Ci~~ 288 (289)
.|.||||++.|.+||+++ |||.||..||.+
T Consensus 7 ~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~ 37 (94)
T 2yu4_A 7 GFTCPITKEEMKKPVKNKVCGHTYEEDAIVR 37 (94)
T ss_dssp CCBCTTTCSBCSSEEEESSSCCEEEHHHHHH
T ss_pred EeECcCcCchhcCCEEcCCCCCeecHHHHHH
Confidence 589999999999999995 999999999964
No 12
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=7.7e-09 Score=74.17 Aligned_cols=31 Identities=32% Similarity=0.754 Sum_probs=28.8
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++.|||.||..||.+
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 44 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHRFCESCMAA 44 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCCCCHHHHHH
T ss_pred cCCCCCCCChHhcCeeECCCCCHHHHHHHHH
Confidence 3689999999999999999999999999964
No 13
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=1.2e-08 Score=73.79 Aligned_cols=31 Identities=32% Similarity=0.742 Sum_probs=28.6
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++.|||.||..||.+
T Consensus 19 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~ 49 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTIDCGHNFCLKCITQ 49 (73)
T ss_dssp CCCBCTTTCSBCSSEEECTTCCEEEHHHHHH
T ss_pred cCCEeccCCcccCCeEEcCCCChhhHHHHHH
Confidence 3579999999999999999999999999964
No 14
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.69 E-value=1.3e-08 Score=74.68 Aligned_cols=31 Identities=32% Similarity=0.787 Sum_probs=28.5
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++.|||.||..|+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 48 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHSFCRACITL 48 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCCBCHHHHHH
T ss_pred cCCCCcCCChhhCcceeCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999964
No 15
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.66 E-value=9e-09 Score=75.37 Aligned_cols=30 Identities=27% Similarity=0.752 Sum_probs=28.2
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||+++|||.||..||.+
T Consensus 12 ~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~ 41 (79)
T 2egp_A 12 EVTCPICLELLTEPLSLDCGHSLCRACITV 41 (79)
T ss_dssp CCEETTTTEECSSCCCCSSSCCCCHHHHSC
T ss_pred CCCCcCCCcccCCeeECCCCCHHHHHHHHH
Confidence 579999999999999999999999999974
No 16
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=1.4e-08 Score=73.90 Aligned_cols=31 Identities=39% Similarity=0.755 Sum_probs=28.5
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++.|||.||..||.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~ 44 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHVFCYLCVKG 44 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEEEEHHHHHH
T ss_pred CCCCCccCCcccCCCEEccCCCHHHHHHHHH
Confidence 3578999999999999999999999999964
No 17
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.63 E-value=6.6e-09 Score=83.16 Aligned_cols=30 Identities=30% Similarity=0.904 Sum_probs=27.9
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||+++|||.||..||..
T Consensus 52 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 81 (124)
T 3fl2_A 52 TFQCICCQELVFRPITTVCQHNVCKDCLDR 81 (124)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHH
T ss_pred CCCCCcCChHHcCcEEeeCCCcccHHHHHH
Confidence 478999999999999999999999999963
No 18
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.63 E-value=5e-09 Score=91.86 Aligned_cols=31 Identities=10% Similarity=-0.030 Sum_probs=28.7
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..|.|+||++.|.+||+++|||+||..||.+
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~ 237 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKDIEE 237 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTHHHH
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHHHHH
Confidence 3589999999999999999999999999964
No 19
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.61 E-value=8e-09 Score=84.58 Aligned_cols=29 Identities=34% Similarity=0.968 Sum_probs=27.3
Q ss_pred eeccccccccCCceecCCCChhhHHhHhc
Q 023002 260 FACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
+.|+||++.|.+||+++|||.||..||..
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~ 82 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSFCSYCINE 82 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEEEHHHHHH
T ss_pred CCCcccCcccCCceECCCCCCccHHHHHH
Confidence 68999999999999999999999999863
No 20
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=2.6e-08 Score=73.12 Aligned_cols=31 Identities=29% Similarity=0.756 Sum_probs=28.5
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+|++++|||.||..|+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 48 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHSFCQACLTA 48 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCCBCTTHHHH
T ss_pred CCCCCCCCCcccCCceeCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999864
No 21
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=2.7e-08 Score=72.58 Aligned_cols=31 Identities=29% Similarity=0.817 Sum_probs=28.2
Q ss_pred CceeccccccccCCceec-CCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVT-KCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT-~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++ .|||.||..||.+
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 45 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVR 45 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHH
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHH
Confidence 468999999999999996 9999999999964
No 22
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.58 E-value=1.3e-08 Score=80.37 Aligned_cols=30 Identities=33% Similarity=0.801 Sum_probs=28.2
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++.|||.||..||.+
T Consensus 15 ~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~ 44 (115)
T 3l11_A 15 ECQCGICMEILVEPVTLPCNHTLCKPCFQS 44 (115)
T ss_dssp HHBCTTTCSBCSSCEECTTSCEECHHHHCC
T ss_pred CCCCccCCcccCceeEcCCCCHHhHHHHHH
Confidence 589999999999999999999999999964
No 23
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.57 E-value=1.2e-08 Score=79.37 Aligned_cols=30 Identities=30% Similarity=0.811 Sum_probs=28.0
Q ss_pred ceeccccccccCCcee-cCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVV-TKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVv-T~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||+ +.|||.||..||.+
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~ 52 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKLCCFSCIRR 52 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHH
T ss_pred CCCCccCCccccCccccCCCCChhhHHHHHH
Confidence 4789999999999999 99999999999964
No 24
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.54 E-value=1.7e-08 Score=84.58 Aligned_cols=30 Identities=33% Similarity=0.901 Sum_probs=28.0
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||+++|||.||..||..
T Consensus 78 ~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~ 107 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVTTECFHNVCKDCLQR 107 (150)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHH
T ss_pred CCEeecCChhhcCCEEcCCCCchhHHHHHH
Confidence 478999999999999999999999999964
No 25
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.53 E-value=1.6e-08 Score=78.52 Aligned_cols=30 Identities=47% Similarity=1.020 Sum_probs=27.7
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++.|||.||..||..
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 50 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLK 50 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHH
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHH
Confidence 468999999999999999999999999864
No 26
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=6.1e-08 Score=72.08 Aligned_cols=30 Identities=33% Similarity=0.881 Sum_probs=27.9
Q ss_pred ceeccccccccCC----ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD----PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+ |+++.|||.||..|+.+
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~ 48 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEK 48 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHH
T ss_pred CCCCccCCccccccCCCeEECCCCChhhHHHHHH
Confidence 5789999999999 99999999999999864
No 27
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.51 E-value=2e-08 Score=79.96 Aligned_cols=30 Identities=30% Similarity=0.823 Sum_probs=28.0
Q ss_pred ceeccccccccCCceec-CCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVT-KCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT-~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++ .|||.||..||..
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~ 52 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSD 52 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGG
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHH
Confidence 47899999999999999 9999999999964
No 28
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.49 E-value=2.8e-08 Score=82.66 Aligned_cols=31 Identities=26% Similarity=0.792 Sum_probs=28.9
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..|.|+||++.|.+||+|.|||.||..||.+
T Consensus 30 ~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~ 60 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 60 (141)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHH
T ss_pred cCcCCCCCChhhcCcEECCCCCccCHHHHHH
Confidence 4689999999999999999999999999964
No 29
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.48 E-value=3.1e-08 Score=77.49 Aligned_cols=30 Identities=30% Similarity=0.940 Sum_probs=27.7
Q ss_pred ceeccccccccCCceec-CCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVT-KCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT-~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++ .|||.||..||..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 45 (108)
T 2ckl_A 15 HLMCVLCGGYFIDATTIIECLHSFCKTCIVR 45 (108)
T ss_dssp GTBCTTTSSBCSSEEEETTTCCEEEHHHHHH
T ss_pred cCCCccCChHHhCcCEeCCCCChhhHHHHHH
Confidence 47899999999999998 9999999999964
No 30
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.47 E-value=3.4e-08 Score=76.00 Aligned_cols=30 Identities=30% Similarity=0.728 Sum_probs=27.5
Q ss_pred ceeccccccccCCceec-CCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVT-KCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT-~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++ .|||.||..||.+
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 52 (99)
T 2y43_A 22 LLRCGICFEYFNIAMIIPQCSHNYCSLCIRK 52 (99)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHH
T ss_pred CCCcccCChhhCCcCEECCCCCHhhHHHHHH
Confidence 47899999999999998 8999999999864
No 31
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.45 E-value=4.2e-08 Score=77.47 Aligned_cols=30 Identities=47% Similarity=1.094 Sum_probs=28.0
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||+++|||.||..||.+
T Consensus 23 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 52 (116)
T 1rmd_A 23 SISCQICEHILADPVETSCKHLFCRICILR 52 (116)
T ss_dssp HTBCTTTCSBCSSEEECTTSCEEEHHHHHH
T ss_pred CCCCCCCCcHhcCcEEcCCCCcccHHHHHH
Confidence 478999999999999999999999999964
No 32
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.42 E-value=5.4e-08 Score=77.54 Aligned_cols=30 Identities=37% Similarity=0.904 Sum_probs=28.2
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+||++.|||.||..||.+
T Consensus 18 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~ 47 (118)
T 3hct_A 18 KYECPICLMALREAVQTPCGHRFCKACIIK 47 (118)
T ss_dssp GGBCTTTCSBCSSEEECTTSCEEEHHHHHH
T ss_pred CCCCCcCChhhcCeEECCcCChhhHHHHHH
Confidence 589999999999999999999999999964
No 33
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.41 E-value=5.7e-08 Score=84.92 Aligned_cols=31 Identities=10% Similarity=-0.030 Sum_probs=28.7
Q ss_pred CceeccccccccCCceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
..|.||||++.|.+||+++|||+||..||..
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~ 135 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITYDRKDIEE 135 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHH
T ss_pred HhhcccCccccCCCCeECCCCCEECHHHHHH
Confidence 3589999999999999999999999999964
No 34
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.39 E-value=4.7e-08 Score=69.85 Aligned_cols=29 Identities=31% Similarity=0.810 Sum_probs=26.3
Q ss_pred eecccccc-ccCCc----eecCCCChhhHHhHhc
Q 023002 260 FACFICRK-PFVDP----VVTKCKHYFCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~-~f~dP----VvT~CGH~FC~~Ci~~ 288 (289)
+.|+||++ .|.+| |++.|||.||..||.+
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~ 37 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDL 37 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHH
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHH
Confidence 58999999 99999 5799999999999864
No 35
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.39 E-value=9.2e-08 Score=67.92 Aligned_cols=31 Identities=32% Similarity=0.768 Sum_probs=28.0
Q ss_pred CceeccccccccCCc-------eecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDP-------VVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP-------VvT~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+| +++.|||.||..||.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 51 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD 51 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHH
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHH
Confidence 357899999999998 9999999999999964
No 36
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.37 E-value=7.6e-08 Score=80.46 Aligned_cols=31 Identities=29% Similarity=0.772 Sum_probs=28.3
Q ss_pred CceeccccccccCCceec-CCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVT-KCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT-~CGH~FC~~Ci~~ 288 (289)
..+.|+||++.|.+||++ .|||.||..||.+
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~ 84 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIIT 84 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHH
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHH
Confidence 367999999999999998 9999999999964
No 37
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.34 E-value=2.5e-07 Score=66.45 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=26.9
Q ss_pred CCceeccccccccC---CceecCCCChhhHHhHhc
Q 023002 257 SLPFACFICRKPFV---DPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 257 ~~p~~C~IC~~~f~---dPVvT~CGH~FC~~Ci~~ 288 (289)
.....|+||++.|. .+++++|||.||..||.+
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~ 46 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQ 46 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHH
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHH
Confidence 34568999999984 578899999999999964
No 38
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.34 E-value=1.2e-07 Score=70.25 Aligned_cols=30 Identities=30% Similarity=0.616 Sum_probs=27.7
Q ss_pred ceeccccccccCCceecCCCCh-hhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~-FC~~Ci~~ 288 (289)
.+.|+||++.+.+||+++|||. ||..|+..
T Consensus 25 ~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~ 55 (75)
T 2ecg_A 25 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEA 55 (75)
T ss_dssp HHSCSSSCSSCCCBCCSSSCCCCBCHHHHHH
T ss_pred CCCCCcCCCCCCCEEEecCCCHHHHHHHhhC
Confidence 4689999999999999999999 99999864
No 39
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.33 E-value=1.9e-07 Score=86.55 Aligned_cols=33 Identities=27% Similarity=0.622 Sum_probs=29.9
Q ss_pred CCCceeccccccccCCcee-cCCCChhhHHhHhc
Q 023002 256 DSLPFACFICRKPFVDPVV-TKCKHYFCEHCALK 288 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dPVv-T~CGH~FC~~Ci~~ 288 (289)
....|.||||+..|++||+ +.|||.||..||.+
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~ 211 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQN 211 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHH
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHH
Confidence 4568999999999999998 59999999999974
No 40
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.31 E-value=1.8e-07 Score=69.38 Aligned_cols=30 Identities=30% Similarity=0.616 Sum_probs=27.9
Q ss_pred ceeccccccccCCceecCCCCh-hhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~-FC~~Ci~~ 288 (289)
.+.|+||++.+.+||+++|||. ||..|+..
T Consensus 24 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~ 54 (74)
T 4ic3_A 24 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEA 54 (74)
T ss_dssp HTBCTTTSSSBCCEEEETTCCBCCCHHHHTT
T ss_pred CCCCCCCCCCCCCEEEcCCCChhHHHHhhhc
Confidence 4689999999999999999999 99999865
No 41
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.31 E-value=8.8e-08 Score=68.72 Aligned_cols=30 Identities=33% Similarity=0.842 Sum_probs=27.5
Q ss_pred ceeccccccccCCc-------eecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dP-------VvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+| +++.|||.||..||.+
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 46 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD 46 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHH
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHH
Confidence 46899999999999 9999999999999964
No 42
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.28 E-value=9.7e-08 Score=66.86 Aligned_cols=30 Identities=33% Similarity=0.814 Sum_probs=27.1
Q ss_pred ceeccccccccCCc-------eecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dP-------VvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+| +++.|||.||..|+.+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 39 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD 39 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHH
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHH
Confidence 36899999999988 8999999999999964
No 43
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.26 E-value=3.3e-07 Score=67.24 Aligned_cols=32 Identities=19% Similarity=0.592 Sum_probs=26.9
Q ss_pred CCceeccccccccCCc---eecCCCChhhHHhHhc
Q 023002 257 SLPFACFICRKPFVDP---VVTKCKHYFCEHCALK 288 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP---VvT~CGH~FC~~Ci~~ 288 (289)
...+.|+||++.|.+| +++.|||.||..||.+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~ 47 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVP 47 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHH
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHH
Confidence 3467999999999876 5579999999999864
No 44
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=5e-07 Score=65.00 Aligned_cols=29 Identities=34% Similarity=0.799 Sum_probs=26.9
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+ ++++|||.||..||.+
T Consensus 15 ~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~ 43 (70)
T 2ecn_A 15 EEECCICMDGRAD-LILPCAHSFCQKCIDK 43 (70)
T ss_dssp CCCCSSSCCSCCS-EEETTTEEECHHHHHH
T ss_pred CCCCeeCCcCccC-cccCCCCcccHHHHHH
Confidence 5789999999999 9999999999999964
No 45
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.25 E-value=2.5e-07 Score=66.14 Aligned_cols=30 Identities=27% Similarity=0.562 Sum_probs=26.8
Q ss_pred ceeccccccccCCc-eecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dP-VvT~CGH~FC~~Ci~~ 288 (289)
...|+||++.|.+| ++++|||.||..|+.+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~ 35 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITR 35 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHH
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHH
Confidence 35899999999997 8899999999999863
No 46
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=1.1e-06 Score=64.76 Aligned_cols=30 Identities=27% Similarity=0.732 Sum_probs=27.6
Q ss_pred ceeccccccccCCceecCCCCh-hhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~-FC~~Ci~~ 288 (289)
...|.||++.+.++|+++|||. ||..|+..
T Consensus 15 ~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~ 45 (68)
T 2ea5_A 15 SKDCVVCQNGTVNWVLLPCRHTCLCDGCVKY 45 (68)
T ss_dssp SSCCSSSSSSCCCCEETTTTBCCSCTTHHHH
T ss_pred CCCCCCcCcCCCCEEEECCCChhhhHHHHhc
Confidence 4689999999999999999999 99999863
No 47
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.14 E-value=5.5e-07 Score=61.65 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=26.2
Q ss_pred eeccccccccCC----ceecCCCChhhHHhHhc
Q 023002 260 FACFICRKPFVD----PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~~ 288 (289)
..|+||++.|.+ ++++.|||.||..||.+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 38 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEE 38 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHH
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHH
Confidence 579999999976 89999999999999864
No 48
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.11 E-value=1.2e-06 Score=66.45 Aligned_cols=30 Identities=27% Similarity=0.679 Sum_probs=25.0
Q ss_pred ceecccccccc--CCceecC--CCChhhHHhHhc
Q 023002 259 PFACFICRKPF--VDPVVTK--CKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f--~dPVvT~--CGH~FC~~Ci~~ 288 (289)
.+.|+||++++ .++++.+ |||.||..|+.+
T Consensus 11 ~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~ 44 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHR 44 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHH
T ss_pred CCcCCccCccCccccccccccCCCCCcCHHHHHH
Confidence 47899999998 4566665 999999999864
No 49
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.06 E-value=1.3e-06 Score=66.79 Aligned_cols=31 Identities=29% Similarity=0.701 Sum_probs=27.5
Q ss_pred CceeccccccccCC---ceecCCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVD---PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~d---PVvT~CGH~FC~~Ci~~ 288 (289)
....|+||++.|.+ +++++|||.||..||.+
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~ 72 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSI 72 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHH
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHH
Confidence 35689999999988 88899999999999864
No 50
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.06 E-value=8.5e-07 Score=67.92 Aligned_cols=30 Identities=23% Similarity=0.645 Sum_probs=26.6
Q ss_pred ceeccccccccCCceec---CCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVT---KCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT---~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|..|+++ .|||.||..|+.+
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~ 37 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQ 37 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHH
Confidence 67899999999999875 6999999999853
No 51
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=2.3e-06 Score=62.09 Aligned_cols=31 Identities=32% Similarity=0.628 Sum_probs=26.4
Q ss_pred CceeccccccccCCceec---CCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVT---KCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT---~CGH~FC~~Ci~~ 288 (289)
....|+||++.|.+|+.+ +|||.||..||.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~ 47 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIK 47 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHH
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHH
Confidence 356899999999887665 9999999999964
No 52
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.04 E-value=1.4e-06 Score=65.72 Aligned_cols=29 Identities=28% Similarity=0.807 Sum_probs=27.2
Q ss_pred eeccccccccCCceecCCCCh-hhHHhHhc
Q 023002 260 FACFICRKPFVDPVVTKCKHY-FCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f~dPVvT~CGH~-FC~~Ci~~ 288 (289)
..|+||++.+.+||+++|||. ||..|+..
T Consensus 19 ~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~ 48 (79)
T 2yho_A 19 MLCMVCCEEEINSTFCPCGHTVCCESCAAQ 48 (79)
T ss_dssp TBCTTTSSSBCCEEEETTCBCCBCHHHHTT
T ss_pred CEeEEeCcccCcEEEECCCCHHHHHHHHHh
Confidence 489999999999999999999 99999875
No 53
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.02 E-value=1.5e-06 Score=67.97 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=25.9
Q ss_pred eeccccccccCCce------------------ecCCCChhhHHhHhc
Q 023002 260 FACFICRKPFVDPV------------------VTKCKHYFCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f~dPV------------------vT~CGH~FC~~Ci~~ 288 (289)
..|+||++.|.+|+ ++.|||.||..||.+
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~ 72 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLA 72 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHH
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHH
Confidence 38999999998876 789999999999964
No 54
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.98 E-value=1.6e-06 Score=63.43 Aligned_cols=30 Identities=30% Similarity=0.604 Sum_probs=26.8
Q ss_pred ceeccccccccCCc---eecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDP---VVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dP---VvT~CGH~FC~~Ci~~ 288 (289)
...|+||++.|.++ ++++|||.||..||.+
T Consensus 23 ~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~ 55 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 55 (75)
T ss_dssp CCEETTTTEECCBTCEEEEETTTEEEETTHHHH
T ss_pred CCCCeECCcccCCCCeEEEECCCCHhHHHHHHH
Confidence 45899999999988 8899999999999864
No 55
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=97.93 E-value=2.2e-06 Score=62.26 Aligned_cols=31 Identities=23% Similarity=0.271 Sum_probs=27.7
Q ss_pred CceeccccccccCCceec-CCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVT-KCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT-~CGH~FC~~Ci~~ 288 (289)
..|.|+||++.|.|||++ .|||.||..||.+
T Consensus 2 ~~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~ 33 (61)
T 2bay_A 2 SHMLCAISGKVPRRPVLSPKSRTIFEKSLLEQ 33 (61)
T ss_dssp --CCCTTTCSCCSSEEEETTTTEEEEHHHHHH
T ss_pred CeEEecCCCCCCCCCEEeCCCCcEEcHHHHHH
Confidence 358999999999999999 9999999999974
No 56
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.92 E-value=2.8e-06 Score=58.16 Aligned_cols=29 Identities=24% Similarity=0.538 Sum_probs=25.6
Q ss_pred eeccccccccCC---ceecC-CCChhhHHhHhc
Q 023002 260 FACFICRKPFVD---PVVTK-CKHYFCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f~d---PVvT~-CGH~FC~~Ci~~ 288 (289)
..|+||++.|.+ ++++. |||.||..||.+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~ 38 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDM 38 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHH
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHH
Confidence 479999999988 78776 999999999964
No 57
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=97.85 E-value=3.6e-06 Score=81.44 Aligned_cols=29 Identities=28% Similarity=0.591 Sum_probs=27.4
Q ss_pred ceeccccccccCCceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~ 287 (289)
...|+||++.+.+||+++|||.||..|+.
T Consensus 332 ~~~C~ICle~~~~pv~lpCGH~FC~~Ci~ 360 (389)
T 2y1n_A 332 FQLCKICAENDKDVKIEPCGHLMCTSCLT 360 (389)
T ss_dssp SSBCTTTSSSBCCEEEETTCCEECHHHHH
T ss_pred CCCCCccCcCCCCeEEeCCCChhhHHHHH
Confidence 36899999999999999999999999985
No 58
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.81 E-value=3.1e-06 Score=61.13 Aligned_cols=31 Identities=32% Similarity=0.591 Sum_probs=27.7
Q ss_pred CceeccccccccCCceec--CCCCh-hhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVT--KCKHY-FCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT--~CGH~-FC~~Ci~~ 288 (289)
....|.||++.++++++. +|||. ||..|+.+
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~ 39 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARR 39 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHH
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHH
Confidence 345899999999999988 99998 99999864
No 59
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.72 E-value=6.9e-06 Score=77.82 Aligned_cols=30 Identities=30% Similarity=0.669 Sum_probs=28.1
Q ss_pred ceeccccccccCCceecCCCCh-hhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~-FC~~Ci~~ 288 (289)
.+.|+||++.+.+||+++|||. ||..|+..
T Consensus 295 ~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~ 325 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVVFIPCGHLVVCQECAPS 325 (345)
T ss_dssp TCBCTTTSSSBCCEEEETTCCEEECTTTGGG
T ss_pred CCCCCccCCcCCceEEcCCCChhHhHHHHhc
Confidence 4789999999999999999999 99999865
No 60
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.59 E-value=1e-05 Score=63.43 Aligned_cols=30 Identities=33% Similarity=0.842 Sum_probs=27.1
Q ss_pred ceeccccccccCCc-------eecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dP-------VvT~CGH~FC~~Ci~~ 288 (289)
.+.|+||++.|.+| |++.|||.||..||.+
T Consensus 72 ~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~ 108 (133)
T 4ap4_A 72 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRD 108 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHH
T ss_pred CCCCCCCCCccccccccCcceEeCCCCChhhHHHHHH
Confidence 46799999999988 9999999999999863
No 61
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=97.50 E-value=1.7e-05 Score=57.38 Aligned_cols=29 Identities=31% Similarity=0.561 Sum_probs=26.5
Q ss_pred eeccccccccCCceec--CCCCh-hhHHhHhc
Q 023002 260 FACFICRKPFVDPVVT--KCKHY-FCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f~dPVvT--~CGH~-FC~~Ci~~ 288 (289)
..|.||++.++++|+. +|||. ||..|+.+
T Consensus 9 ~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~ 40 (64)
T 2vje_A 9 EPCVICQGRPKNGCIVHGKTGHLMACFTCAKK 40 (64)
T ss_dssp SCCTTTSSSCSCEEEEETTEEEEEECHHHHHH
T ss_pred CCCCcCCCCCCCEEEECCCCCChhhHHHHHHH
Confidence 3799999999999988 99999 89999864
No 62
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.41 E-value=4.6e-05 Score=57.16 Aligned_cols=28 Identities=39% Similarity=0.808 Sum_probs=22.5
Q ss_pred eccccccccCC--------------cee-cCCCChhhHHhHhc
Q 023002 261 ACFICRKPFVD--------------PVV-TKCKHYFCEHCALK 288 (289)
Q Consensus 261 ~C~IC~~~f~d--------------PVv-T~CGH~FC~~Ci~~ 288 (289)
.|+||++.|.+ +++ +.|||.|+..||.+
T Consensus 17 ~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~ 59 (81)
T 2ecl_A 17 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 59 (81)
T ss_dssp CBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHH
T ss_pred CCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHH
Confidence 58999998877 444 46999999999963
No 63
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.04 E-value=0.00018 Score=57.45 Aligned_cols=28 Identities=36% Similarity=0.758 Sum_probs=24.5
Q ss_pred eccccccccCCc------------------eecCCCChhhHHhHhc
Q 023002 261 ACFICRKPFVDP------------------VVTKCKHYFCEHCALK 288 (289)
Q Consensus 261 ~C~IC~~~f~dP------------------VvT~CGH~FC~~Ci~~ 288 (289)
.|.||++.|.+| ++++|||.|+..||.+
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~ 84 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR 84 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHH
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHH
Confidence 699999999877 4589999999999964
No 64
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.99 E-value=0.00024 Score=52.62 Aligned_cols=32 Identities=38% Similarity=1.108 Sum_probs=28.0
Q ss_pred eecCCCcCCCcccccccCCCceeeeeeccccc
Q 023002 184 DYQPDICKDYKETGYCGYGDSCKFMHDRGDYK 215 (289)
Q Consensus 184 DyqPDiCKDykeTG~CGfGDsCKFlHdR~dyk 215 (289)
.|.--+|+.|..+|.|.||+.|+|+|+...+.
T Consensus 9 ~~kt~~C~~f~~~G~C~~G~~C~f~H~~~e~~ 40 (77)
T 1m9o_A 9 RYKTELCRTYSESGRCRYGAKCQFAHGLGELR 40 (77)
T ss_dssp CCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGG
T ss_pred CccchhCHHhhhCCCcCCCCCccCCCCChhhc
Confidence 46678899998899999999999999998754
No 65
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.63 E-value=0.0003 Score=52.03 Aligned_cols=28 Identities=36% Similarity=1.073 Sum_probs=0.0
Q ss_pred ecCCCcCCCcccccccCCCceeeeeecc
Q 023002 185 YQPDICKDYKETGYCGYGDSCKFMHDRG 212 (289)
Q Consensus 185 yqPDiCKDykeTG~CGfGDsCKFlHdR~ 212 (289)
|..-+|+.|..+|+|.||+.|.|+|...
T Consensus 48 ~k~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 48 YKTELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp ----------------------------
T ss_pred ccCCcccchhhCcCCCCcCcCCCCCCCC
Confidence 4446899999999999999999999864
No 66
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=96.23 E-value=0.00074 Score=55.17 Aligned_cols=28 Identities=36% Similarity=0.757 Sum_probs=0.0
Q ss_pred eccccccccCCce------------------ecCCCChhhHHhHhc
Q 023002 261 ACFICRKPFVDPV------------------VTKCKHYFCEHCALK 288 (289)
Q Consensus 261 ~C~IC~~~f~dPV------------------vT~CGH~FC~~Ci~~ 288 (289)
.|.||++.|.+|. +++|||.|+..||.+
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~ 95 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR 95 (117)
T ss_dssp ----------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHH
Confidence 7999999998753 258999999999964
No 67
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=95.77 E-value=0.0018 Score=51.29 Aligned_cols=27 Identities=44% Similarity=0.709 Sum_probs=23.6
Q ss_pred CCCcCCCcccccccCCCceeeeeeccc
Q 023002 187 PDICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 187 PDiCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
--+|+.|..+|+|.||+.|+|+|+...
T Consensus 36 ~~~C~~f~~~G~C~~G~~C~f~H~~~~ 62 (98)
T 2cqe_A 36 DFPCKLYHTTGNCINGDDCMFSHDPLT 62 (98)
T ss_dssp SSBCSHHHHTSCCSSCTTCSSBCCCCC
T ss_pred CCcCcCcccCCcCCCCCCCcccCCCCc
Confidence 457999988899999999999999765
No 68
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=95.65 E-value=0.0037 Score=49.42 Aligned_cols=26 Identities=35% Similarity=0.949 Sum_probs=22.8
Q ss_pred eecCCCcCCCcccccccCCCceeeeee
Q 023002 184 DYQPDICKDYKETGYCGYGDSCKFMHD 210 (289)
Q Consensus 184 DyqPDiCKDykeTG~CGfGDsCKFlHd 210 (289)
.+..-+|+.|. +|.|.+||.|.|+|+
T Consensus 10 ~~k~~lC~~f~-~G~C~~G~~C~f~H~ 35 (98)
T 2cqe_A 10 PKKRELCKFYI-TGFCARAENCPYMHG 35 (98)
T ss_dssp SCCCSBCTTTT-TTCCSCSTTCSSBSS
T ss_pred CCCCccCcccc-cCcCCCCCCCCCCCC
Confidence 45667899995 899999999999998
No 69
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.46 E-value=0.0017 Score=49.26 Aligned_cols=38 Identities=45% Similarity=0.933 Sum_probs=28.4
Q ss_pred CCcCCCcccccccCCCceeeeeecccccccchhhHHHHHHHHHHhh
Q 023002 188 DICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEAEKARKR 233 (289)
Q Consensus 188 DiCKDykeTG~CGfGDsCKFlHdR~dyk~GWqld~ewe~~~k~kk~ 233 (289)
-+|+.| ++|.|.||+.|.|.|--.. | ++|.+.....+.
T Consensus 21 ~LC~~~-~~G~C~~G~~C~FAHG~~E------L-r~~~~R~~~~k~ 58 (69)
T 2d9m_A 21 SICDRY-MNGTCPEGNSCKFAHGNAE------L-HEWEERRDALKM 58 (69)
T ss_dssp SBCHHH-HHSCCSSCSSCSSBSSHHH------H-HHHHHHHHHHTT
T ss_pred ccCccc-CcCCCCCCCccCCcCCHHH------H-hhHHHHHHHHHH
Confidence 789999 8999999999999996543 3 456555444443
No 70
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.38 E-value=0.0088 Score=45.34 Aligned_cols=29 Identities=28% Similarity=0.652 Sum_probs=25.4
Q ss_pred eecccccccc--CCceecCCC-----ChhhHHhHhc
Q 023002 260 FACFICRKPF--VDPVVTKCK-----HYFCEHCALK 288 (289)
Q Consensus 260 ~~C~IC~~~f--~dPVvT~CG-----H~FC~~Ci~~ 288 (289)
..|.||++.| .+|++++|. |+|...||.+
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~ 51 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQ 51 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHH
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHH
Confidence 4799999988 579999996 9999999964
No 71
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=94.68 E-value=0.0036 Score=46.87 Aligned_cols=28 Identities=32% Similarity=0.827 Sum_probs=24.0
Q ss_pred ecCCCcCCCcccccccCCCceeeeeeccc
Q 023002 185 YQPDICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 185 yqPDiCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
...-||+.|.. |.|-.||+|.|+|+...
T Consensus 14 ~k~~vCk~fl~-G~C~~G~~C~fsH~~~~ 41 (72)
T 2rhk_C 14 EKTVVCKHWLR-GLCKKGDQCEFLHEYDM 41 (72)
T ss_dssp CCCSBCHHHHT-TCCCCGGGSSSBCSCCT
T ss_pred CcCeeCHHHhc-CCCCCCCCCCCcccccc
Confidence 34568998888 99999999999999764
No 72
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.60 E-value=0.0051 Score=46.28 Aligned_cols=28 Identities=32% Similarity=0.827 Sum_probs=24.0
Q ss_pred ecCCCcCCCcccccccCCCceeeeeeccc
Q 023002 185 YQPDICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 185 yqPDiCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
+.--||+.|.. |.|-.||.|.|+|+...
T Consensus 8 ~k~~~C~~fl~-G~C~~G~~C~fsH~~~~ 35 (77)
T 2d9n_A 8 EKTVVCKHWLR-GLCKKGDQCEFLHEYDM 35 (77)
T ss_dssp CTTSBCHHHHT-TCCSCTTSSSSBCSCCT
T ss_pred CcceeCHhHcc-CcCCCCCCCCCcccccc
Confidence 34467998888 99999999999999875
No 73
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=93.34 E-value=0.012 Score=43.52 Aligned_cols=26 Identities=31% Similarity=1.037 Sum_probs=22.2
Q ss_pred CCCcCCCcccccccCCCc-eeeeeeccc
Q 023002 187 PDICKDYKETGYCGYGDS-CKFMHDRGD 213 (289)
Q Consensus 187 PDiCKDykeTG~CGfGDs-CKFlHdR~d 213 (289)
-.||++| ..|.|--||+ |+|+|+...
T Consensus 6 ~~vC~~f-~~G~C~rg~~~C~f~H~~~~ 32 (70)
T 3d2q_A 6 LEVCREY-QRGNCNRGENDCRFAHPADS 32 (70)
T ss_dssp EEBCHHH-HTTCCSSCTTTCSSBCCCTT
T ss_pred chhCHHH-hcCCCCCCCCCCCCccCccc
Confidence 3589999 6699999996 999998764
No 74
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=90.68 E-value=0.066 Score=41.91 Aligned_cols=40 Identities=33% Similarity=0.849 Sum_probs=31.1
Q ss_pred CCCCCCcCCceeeeeeeeeecCCCcCCCcccccccCCC-ceeeeeecccc
Q 023002 166 GSHGPLRASAHIRVTARFDYQPDICKDYKETGYCGYGD-SCKFMHDRGDY 214 (289)
Q Consensus 166 ~~~GPirap~niR~t~~~DyqPDiCKDykeTG~CGfGD-sCKFlHdR~dy 214 (289)
+-..|+|-+..++ -.||+||.. |.|-=|| .|+|+|.....
T Consensus 4 ~~~~~~~~~~~~~--------~~VCrdFlr-G~C~r~d~~CrfsH~~~~~ 44 (89)
T 2rpp_A 4 GSSGPVRDTKWLT--------LEVCRQFQR-GTCSRSDEECKFAHPPKSC 44 (89)
T ss_dssp CCCSCCCSCSSSE--------ECBCHHHHH-TCCCCCTTTSSSBCCCSSS
T ss_pred cccccccCCCcch--------hhhchHHhc-CCCCCCCCCCCCcCCCccc
Confidence 3455666655555 467999988 9999998 99999998863
No 75
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=89.64 E-value=0.093 Score=47.74 Aligned_cols=29 Identities=34% Similarity=0.803 Sum_probs=23.5
Q ss_pred CCCcCCCccc---ccccCCCceeeeeeccccc
Q 023002 187 PDICKDYKET---GYCGYGDSCKFMHDRGDYK 215 (289)
Q Consensus 187 PDiCKDykeT---G~CGfGDsCKFlHdR~dyk 215 (289)
|+||+.|+.. |.|.|++.|..||+=.-|.
T Consensus 151 PeiC~~YkG~g~~g~C~~~~~C~kLHIC~~Fl 182 (229)
T 3u9g_A 151 PEICKSYKGEGRKQTCGQPQPCERLHICEHFT 182 (229)
T ss_dssp CCBCTTCCCSSSCCSCSSSSCCCSBCSCHHHH
T ss_pred chHHHHhCCCCCCCcCCCCCCCcceeccchhh
Confidence 8999999543 6999999999999854433
No 76
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=89.64 E-value=0.055 Score=38.72 Aligned_cols=28 Identities=29% Similarity=0.731 Sum_probs=24.9
Q ss_pred CCCcCCCcccccccCCCceeeeeecccc
Q 023002 187 PDICKDYKETGYCGYGDSCKFMHDRGDY 214 (289)
Q Consensus 187 PDiCKDykeTG~CGfGDsCKFlHdR~dy 214 (289)
=-||+.|-.-|||..|..|.|.||-..-
T Consensus 20 ~~iC~~FSayGwCp~G~~Cp~SHDiDl~ 47 (50)
T 2fc6_A 20 TSICDNFSAYGWCPLGPQCPQSHDISGP 47 (50)
T ss_dssp SCBCSHHHHTCCCTTGGGCSSBCCCCCC
T ss_pred cchhhhccccccCCCCCCCCccccCCCC
Confidence 4689999999999999999999997653
No 77
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=89.52 E-value=0.12 Score=39.85 Aligned_cols=26 Identities=31% Similarity=0.910 Sum_probs=23.3
Q ss_pred CCCcCCCcccccccCCC-ceeeeeeccc
Q 023002 187 PDICKDYKETGYCGYGD-SCKFMHDRGD 213 (289)
Q Consensus 187 PDiCKDykeTG~CGfGD-sCKFlHdR~d 213 (289)
-.||+||.. |.|-=|| .|+|+|+...
T Consensus 9 ~~VCr~Flr-G~C~r~d~~C~f~H~~~~ 35 (83)
T 3d2n_A 9 LEVCREFQR-GTCSRPDTECKFAHPSKS 35 (83)
T ss_dssp EEBCTTGGG-TCCCSCTTTCSSBCCCTT
T ss_pred chhcHHHhc-CCCCCCCCCCCCcCCCcc
Confidence 568999999 9999998 9999999864
No 78
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=88.54 E-value=0.12 Score=39.23 Aligned_cols=21 Identities=29% Similarity=0.744 Sum_probs=17.9
Q ss_pred ccCCcee--cCCCChhhHHhHhc
Q 023002 268 PFVDPVV--TKCKHYFCEHCALK 288 (289)
Q Consensus 268 ~f~dPVv--T~CGH~FC~~Ci~~ 288 (289)
.+.+||+ +.|+|+||..|+..
T Consensus 13 ~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 13 PAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp SCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCceEECCcCChHHhHHHCHH
Confidence 4677888 99999999999863
No 79
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.35 E-value=0.064 Score=40.19 Aligned_cols=24 Identities=29% Similarity=0.690 Sum_probs=21.8
Q ss_pred CcCCCcccccccCCCceeeeeeccc
Q 023002 189 ICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 189 iCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
+|+.|..+|+|. |+.|.|+|....
T Consensus 40 ~C~~f~~~G~C~-~~~C~f~H~~~~ 63 (77)
T 2d9n_A 40 ECYFYSKFGECS-NKECPFLHIDPE 63 (77)
T ss_dssp BCHHHHHTCCCC-CSSCSSBCCCTT
T ss_pred CCcccCCCCccC-CCCeeccCCCcc
Confidence 799999999999 999999998754
No 80
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.90 E-value=0.057 Score=42.73 Aligned_cols=25 Identities=28% Similarity=1.075 Sum_probs=22.2
Q ss_pred CCcCCCcccccccCCC-ceeeeeeccc
Q 023002 188 DICKDYKETGYCGYGD-SCKFMHDRGD 213 (289)
Q Consensus 188 DiCKDykeTG~CGfGD-sCKFlHdR~d 213 (289)
.||++|.. |-|--|| .|+|+|+...
T Consensus 21 ~VCr~Flr-G~C~rgd~~C~FsH~~~~ 46 (98)
T 2e5s_A 21 EVCREFQR-GNCARGETDCRFAHPADS 46 (98)
T ss_dssp EBCSHHHH-TCCSSHHHHCSSBCCSSC
T ss_pred hhhHHHhc-CcCCCCCCCCCCcCCchh
Confidence 47999988 9999999 6999999875
No 81
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=85.77 E-value=0.12 Score=38.10 Aligned_cols=24 Identities=33% Similarity=0.912 Sum_probs=20.0
Q ss_pred CCcCCCcccccccCCCceeeeeeccc
Q 023002 188 DICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 188 DiCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
-+|+||.. |.|..| .|+|+|.-..
T Consensus 43 ~vC~~flk-G~C~r~-~C~y~H~~~~ 66 (70)
T 3d2q_A 43 TVCMDYIK-GRCSRE-KCKYFHPPAH 66 (70)
T ss_dssp EBCHHHHT-TCCCCT-TCCSBCCCHH
T ss_pred eeccccCc-CCCCCC-CcCeeCCHHH
Confidence 46888877 999999 9999997543
No 82
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=81.81 E-value=0.19 Score=37.45 Aligned_cols=24 Identities=29% Similarity=0.665 Sum_probs=21.7
Q ss_pred CcCCCcccccccCCCceeeeeeccc
Q 023002 189 ICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 189 iCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
+|+.|...|.|.+ +.|.|+|..-.
T Consensus 46 ~C~~f~~~G~C~~-~~C~y~H~~p~ 69 (72)
T 2rhk_C 46 ECYFYSKFGECSN-KECPFLHIDPE 69 (72)
T ss_dssp BCHHHHHHSCCSB-TTCCSBCCCCC
T ss_pred cccccCCCCCCCC-CCeeccCCCcc
Confidence 7999988899999 99999998754
No 83
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.32 E-value=0.21 Score=39.41 Aligned_cols=23 Identities=35% Similarity=0.895 Sum_probs=19.2
Q ss_pred CcCCCcccccccCCCceeeeeeccc
Q 023002 189 ICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 189 iCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
+|.||-. |.|..| .|+|+|.+..
T Consensus 58 vC~~flk-G~C~r~-~C~y~H~~~~ 80 (98)
T 2e5s_A 58 VCMDYIK-GRCMRE-KCKYFHPPAH 80 (98)
T ss_dssp BCHHHHH-TCCCCT-TCCSBCCCHH
T ss_pred cchhhcc-CCCCCC-CcCccCChHH
Confidence 5777766 899999 8999998764
No 84
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=78.56 E-value=0.91 Score=43.98 Aligned_cols=33 Identities=30% Similarity=0.518 Sum_probs=26.0
Q ss_pred CCCceeccccccccCC----cee----cCCCChhhHHhHhc
Q 023002 256 DSLPFACFICRKPFVD----PVV----TKCKHYFCEHCALK 288 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~d----PVv----T~CGH~FC~~Ci~~ 288 (289)
++....|.||...+.+ |.. .+|||.|-..|+.+
T Consensus 305 ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~k 345 (381)
T 3k1l_B 305 DNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEE 345 (381)
T ss_dssp CCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHH
T ss_pred ccCCccCcccceeecCCCCCccccccCCccCCccchHHHHH
Confidence 4456789999999876 432 58999999999853
No 85
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=75.54 E-value=0.68 Score=30.47 Aligned_cols=16 Identities=25% Similarity=0.387 Sum_probs=13.6
Q ss_pred ceeccccccccCCcee
Q 023002 259 PFACFICRKPFVDPVV 274 (289)
Q Consensus 259 p~~C~IC~~~f~dPVv 274 (289)
.|.||||+..|.+|-.
T Consensus 5 GFiCP~C~~~l~s~~~ 20 (34)
T 3mjh_B 5 GFICPQCMKSLGSADE 20 (34)
T ss_dssp EEECTTTCCEESSHHH
T ss_pred ccCCcHHHHHcCCHHH
Confidence 5999999999988743
No 86
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=68.02 E-value=1.7 Score=35.27 Aligned_cols=28 Identities=29% Similarity=0.762 Sum_probs=21.7
Q ss_pred eeccccccccCC----ceecCCCChhhHHhHh
Q 023002 260 FACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 260 ~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
..|.+|...|.- ----.||+.||..|..
T Consensus 70 ~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~ 101 (125)
T 1joc_A 70 QNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 101 (125)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCCcCcCCccccccccccCCCCCeEEChHHhC
Confidence 489999999962 1224799999999964
No 87
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=63.69 E-value=2.4 Score=32.47 Aligned_cols=29 Identities=24% Similarity=0.630 Sum_probs=22.4
Q ss_pred ceeccccccccC----CceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFV----DPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~----dPVvT~CGH~FC~~Ci~ 287 (289)
...|.+|...|. .-.--.||+.||..|..
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~ 52 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVCCN 52 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcccC
Confidence 347999999995 22336799999999964
No 88
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=63.25 E-value=2.3 Score=23.15 Aligned_cols=16 Identities=38% Similarity=1.011 Sum_probs=13.3
Q ss_pred CceeccccccccCCce
Q 023002 258 LPFACFICRKPFVDPV 273 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPV 273 (289)
.||.|.+|...|..+.
T Consensus 2 k~~~C~~C~~~f~~~~ 17 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPT 17 (30)
T ss_dssp CCEECTTTCCEESCHH
T ss_pred cCccCCCCCcccCCHH
Confidence 5899999999997653
No 89
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=61.61 E-value=4.3 Score=28.79 Aligned_cols=28 Identities=18% Similarity=0.485 Sum_probs=21.7
Q ss_pred eeccccccccCCceecCCCC-----hhhHHhHh
Q 023002 260 FACFICRKPFVDPVVTKCKH-----YFCEHCAL 287 (289)
Q Consensus 260 ~~C~IC~~~f~dPVvT~CGH-----~FC~~Ci~ 287 (289)
-.|.||+....+|++.+|.+ +|=..||.
T Consensus 7 ~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~ 39 (60)
T 1vyx_A 7 PVCWICNEELGNERFRACGCTGELENVHRSCLS 39 (60)
T ss_dssp CEETTTTEECSCCCCCSCCCSSGGGSCCHHHHH
T ss_pred CEeEEeecCCCCceecCcCCCCchhhhHHHHHH
Confidence 48999999888899999653 66555654
No 90
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=61.59 E-value=3 Score=24.42 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|..+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSSBCCTTTCCCBSSH
T ss_pred CCCccCCCCCcccCcH
Confidence 3689999999999764
No 91
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.22 E-value=2.6 Score=22.97 Aligned_cols=15 Identities=33% Similarity=0.720 Sum_probs=12.8
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 2 k~~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDF 16 (27)
T ss_dssp CCEECSSSSCEESSH
T ss_pred cCccCCCcChhhCCH
Confidence 589999999998764
No 92
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=60.76 E-value=1.3 Score=39.75 Aligned_cols=25 Identities=24% Similarity=0.665 Sum_probs=21.2
Q ss_pred CCCcCCCcccccccCCCceeeeeecc
Q 023002 187 PDICKDYKETGYCGYGDSCKFMHDRG 212 (289)
Q Consensus 187 PDiCKDykeTG~CGfGDsCKFlHdR~ 212 (289)
|=||--|.. |+|-.|+.|.|+|..-
T Consensus 70 ~~~C~ffak-G~C~~G~~C~y~H~lP 94 (240)
T 3u1l_A 70 LFFCLFFAK-GMCCLGPKCEYLHHIP 94 (240)
T ss_dssp CSBCHHHHT-TCCSCGGGCSSBBSCC
T ss_pred CeEcCcccc-CCCCCCCCCCccCCCC
Confidence 668988866 9999999999999643
No 93
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=60.03 E-value=3.8 Score=30.86 Aligned_cols=29 Identities=24% Similarity=0.504 Sum_probs=22.4
Q ss_pred ceeccccccccCC----ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
...|.+|...|.- ----.||+.||..|..
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 53 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDCSR 53 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGGGC
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHHhC
Confidence 4489999999952 2235799999999964
No 94
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=59.85 E-value=2.7 Score=22.62 Aligned_cols=14 Identities=29% Similarity=1.008 Sum_probs=11.2
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|..+
T Consensus 1 ~~~C~~C~k~f~~~ 14 (27)
T 1znf_A 1 XYKCGLCERSFVEK 14 (27)
T ss_dssp -CBCSSSCCBCSSH
T ss_pred CccCCCCCCcCCCH
Confidence 68999999999764
No 95
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=59.77 E-value=3.3 Score=22.28 Aligned_cols=15 Identities=27% Similarity=0.421 Sum_probs=12.5
Q ss_pred ceeccccccccCCce
Q 023002 259 PFACFICRKPFVDPV 273 (289)
Q Consensus 259 p~~C~IC~~~f~dPV 273 (289)
||.|.+|...|..+.
T Consensus 2 ~~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCCSSCCCCCCTTT
T ss_pred CCcCCCCCcccCCHH
Confidence 789999999997653
No 96
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=59.47 E-value=3.3 Score=22.48 Aligned_cols=14 Identities=29% Similarity=0.930 Sum_probs=12.0
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|...
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 1ard_A 2 SFVCEVCTRAFARQ 15 (29)
T ss_dssp CCBCTTTCCBCSSH
T ss_pred CeECCCCCcccCCH
Confidence 79999999999753
No 97
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=59.09 E-value=3.3 Score=30.37 Aligned_cols=27 Identities=33% Similarity=0.721 Sum_probs=21.1
Q ss_pred eccccccccCC----ceecCCCChhhHHhHh
Q 023002 261 ACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 261 ~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
.|.+|...|.- ----.||+.||..|..
T Consensus 13 ~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 13 ACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred cccCCCCccCCccccccCCCCCEEEcccccC
Confidence 79999999952 2225799999999963
No 98
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=59.02 E-value=4 Score=30.58 Aligned_cols=28 Identities=32% Similarity=0.750 Sum_probs=21.7
Q ss_pred eeccccccccCC----ceecCCCChhhHHhHh
Q 023002 260 FACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 260 ~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
..|.+|...|.- ----.||+.||..|..
T Consensus 20 ~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 51 (82)
T 2yw8_A 20 THCRQCEKEFSISRRKHHCRNCGHIFCNTCSS 51 (82)
T ss_dssp CBCTTTCCBCBTTBCCEECTTTCCEECSGGGC
T ss_pred CcccCcCCcccCccccccCCCCCCEEChHHhC
Confidence 479999999962 1225799999999964
No 99
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=58.10 E-value=2.7 Score=36.95 Aligned_cols=27 Identities=30% Similarity=0.784 Sum_probs=21.6
Q ss_pred eccccccccC----CceecCCCChhhHHhHh
Q 023002 261 ACFICRKPFV----DPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 261 ~C~IC~~~f~----dPVvT~CGH~FC~~Ci~ 287 (289)
.|.+|...|. .----.||+.||..|..
T Consensus 166 ~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~ 196 (226)
T 3zyq_A 166 ECHRCRVQFGVMTRKHHCRACGQIFCGKCSS 196 (226)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECTTTCC
T ss_pred CCcCcCCCCCccccccccCCCcCEeChhhcC
Confidence 7999999995 23336799999999964
No 100
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=57.98 E-value=3.4 Score=22.51 Aligned_cols=14 Identities=43% Similarity=0.842 Sum_probs=12.1
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 1rik_A 2 KFACPECPKRFMRS 15 (29)
T ss_dssp CEECSSSSCEESCS
T ss_pred CccCCCCCchhCCH
Confidence 79999999998764
No 101
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=57.81 E-value=2.9 Score=23.03 Aligned_cols=15 Identities=27% Similarity=0.693 Sum_probs=12.6
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 2 k~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 2 APYRCPLCRAGCPSL 16 (27)
T ss_dssp CTEEETTTTEEESCH
T ss_pred cCcCCCCCCcccCCH
Confidence 589999999998754
No 102
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=57.71 E-value=3.3 Score=22.51 Aligned_cols=15 Identities=33% Similarity=0.835 Sum_probs=12.6
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 2 k~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLK 16 (28)
T ss_dssp CSEECSSSCCEESCH
T ss_pred cCccCCCCCcccCCH
Confidence 589999999998753
No 103
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=57.68 E-value=4.1 Score=29.61 Aligned_cols=27 Identities=26% Similarity=0.814 Sum_probs=22.8
Q ss_pred eccccccccCCce---ecCCCChhhHHhHh
Q 023002 261 ACFICRKPFVDPV---VTKCKHYFCEHCAL 287 (289)
Q Consensus 261 ~C~IC~~~f~dPV---vT~CGH~FC~~Ci~ 287 (289)
.|.-|...|.++. -..|++.||..|=+
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~ 46 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDV 46 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHH
T ss_pred cccccCcccCCCccEECCccCcCcccchhH
Confidence 5999999997765 57999999999953
No 104
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=57.55 E-value=2.9 Score=22.62 Aligned_cols=15 Identities=33% Similarity=0.720 Sum_probs=12.5
Q ss_pred ceeccccccccCCce
Q 023002 259 PFACFICRKPFVDPV 273 (289)
Q Consensus 259 p~~C~IC~~~f~dPV 273 (289)
||.|.+|...|..+.
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 2m0f_A 2 PLKCRECGKQFTTSG 16 (29)
T ss_dssp CEECTTTSCEESCHH
T ss_pred CccCCCCCCccCChh
Confidence 799999999987653
No 105
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.41 E-value=3.7 Score=30.85 Aligned_cols=29 Identities=24% Similarity=0.563 Sum_probs=21.7
Q ss_pred ceeccccccccCC----ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
...|.+|...|.- ----.||+.||..|..
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~ 46 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCS 46 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTTSC
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhhcC
Confidence 3489999999941 1225799999999963
No 106
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=57.36 E-value=2.7 Score=36.49 Aligned_cols=27 Identities=30% Similarity=0.844 Sum_probs=21.0
Q ss_pred eccccccccC----CceecCCCChhhHHhHh
Q 023002 261 ACFICRKPFV----DPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 261 ~C~IC~~~f~----dPVvT~CGH~FC~~Ci~ 287 (289)
.|.+|...|. .----.||+.||..|..
T Consensus 163 ~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~ 193 (220)
T 1dvp_A 163 VCHRCRVEFTFTNRKHHCRNCGQVFCGQCTA 193 (220)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECSTTSC
T ss_pred ccCCCCCccCCcccccccCCcCCEEChHHhC
Confidence 8999999995 11225799999999964
No 107
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=61.75 E-value=2.2 Score=23.01 Aligned_cols=15 Identities=40% Similarity=0.922 Sum_probs=12.5
Q ss_pred ceeccccccccCCce
Q 023002 259 PFACFICRKPFVDPV 273 (289)
Q Consensus 259 p~~C~IC~~~f~dPV 273 (289)
||.|.+|...|...-
T Consensus 2 p~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 2 PYVCERCGKRFVQSS 16 (26)
Confidence 799999999997643
No 108
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=56.87 E-value=4.1 Score=22.08 Aligned_cols=14 Identities=21% Similarity=0.555 Sum_probs=12.2
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (30)
T 1klr_A 2 TYQCQYCEFRSADS 15 (30)
T ss_dssp CCCCSSSSCCCSCS
T ss_pred CccCCCCCCccCCH
Confidence 78999999999764
No 109
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=56.52 E-value=4 Score=22.37 Aligned_cols=14 Identities=29% Similarity=0.892 Sum_probs=12.1
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (30)
T 1paa_A 2 AYACGLCNRAFTRR 15 (30)
T ss_dssp CSBCTTTCCBCSSS
T ss_pred CcCCcccCcccCCh
Confidence 79999999999764
No 110
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.40 E-value=3.7 Score=23.73 Aligned_cols=16 Identities=19% Similarity=0.393 Sum_probs=13.2
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 7 GKPYKCPQCSYASAIK 22 (36)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCCCCCCCCcccCCH
Confidence 3599999999998754
No 111
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.16 E-value=3.9 Score=23.83 Aligned_cols=16 Identities=25% Similarity=0.621 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 7 GKPFKCSLCEYATRSK 22 (36)
T ss_dssp CCSEECSSSSCEESCH
T ss_pred CCCccCCCCCchhCCH
Confidence 3699999999999764
No 112
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=55.86 E-value=3.6 Score=33.59 Aligned_cols=28 Identities=29% Similarity=0.733 Sum_probs=21.9
Q ss_pred eeccccccccCC----ceecCCCChhhHHhHh
Q 023002 260 FACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 260 ~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
..|.+|...|.- ----.||+.||..|..
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~ 51 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSS 51 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEECGGGEE
T ss_pred CcccCcCCccccccccccCCCCCCeeCHHHhC
Confidence 489999999952 2335799999999954
No 113
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.84 E-value=4.1 Score=23.53 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 7 ~~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSK 22 (36)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CCCeecCcCCCCcCch
Confidence 3689999999999764
No 114
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=55.57 E-value=2.5 Score=39.38 Aligned_cols=29 Identities=21% Similarity=0.600 Sum_probs=0.0
Q ss_pred ceeccccccccC----CceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFV----DPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~----dPVvT~CGH~FC~~Ci~ 287 (289)
...|.+|...|. .-.--.||+.||..|..
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~ 407 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSR 407 (434)
T ss_dssp ---------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhhCC
Confidence 357999999995 22335799999999963
No 115
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=59.99 E-value=2.5 Score=23.24 Aligned_cols=15 Identities=33% Similarity=0.930 Sum_probs=12.5
Q ss_pred ceeccccccccCCce
Q 023002 259 PFACFICRKPFVDPV 273 (289)
Q Consensus 259 p~~C~IC~~~f~dPV 273 (289)
||.|.+|...|..+-
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 2 PCQCVMCGKAFTQAS 16 (29)
Confidence 799999999997643
No 116
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=54.95 E-value=2.7 Score=32.19 Aligned_cols=28 Identities=25% Similarity=0.593 Sum_probs=21.7
Q ss_pred eeccccccccCC----ceecCCCChhhHHhHh
Q 023002 260 FACFICRKPFVD----PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 260 ~~C~IC~~~f~d----PVvT~CGH~FC~~Ci~ 287 (289)
..|.+|...|.- ----.||+.||..|..
T Consensus 10 ~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~ 41 (88)
T 1wfk_A 10 SRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLS 41 (88)
T ss_dssp SBCTTTCCBCCSSSCEEECSSSCCEEETTTSC
T ss_pred CCCcCcCCcccCccccccCCCCCCEEChhHcC
Confidence 389999999862 2225799999999964
No 117
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.42 E-value=4.8 Score=23.53 Aligned_cols=16 Identities=19% Similarity=0.411 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCEECSSSSCEECSS
T ss_pred CCCeECCCCChhhccC
Confidence 3689999999999765
No 118
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=54.18 E-value=4.3 Score=23.21 Aligned_cols=15 Identities=33% Similarity=0.815 Sum_probs=12.9
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 6 SGYVCALCLKKFVSS 20 (35)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCcchhCCH
Confidence 589999999998764
No 119
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=59.26 E-value=2.7 Score=23.06 Aligned_cols=16 Identities=38% Similarity=1.095 Sum_probs=13.1
Q ss_pred CceeccccccccCCce
Q 023002 258 LPFACFICRKPFVDPV 273 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPV 273 (289)
.||.|.+|...|..+-
T Consensus 2 k~~~C~~C~k~f~~~~ 17 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPG 17 (30)
Confidence 4899999999997643
No 120
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.80 E-value=4 Score=23.77 Aligned_cols=16 Identities=31% Similarity=0.492 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 7 GKIFTCEYCNKVFKFK 22 (36)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCEECCCCCceeCCH
Confidence 3699999999999764
No 121
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=53.57 E-value=4.5 Score=31.84 Aligned_cols=32 Identities=34% Similarity=0.830 Sum_probs=26.5
Q ss_pred CCCceeccccccccCCceecCC----CChhhHHhHh
Q 023002 256 DSLPFACFICRKPFVDPVVTKC----KHYFCEHCAL 287 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dPVvT~C----GH~FC~~Ci~ 287 (289)
...++.|.+|.+-+.+.-.-.| +|-||-.|..
T Consensus 12 ~~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr 47 (93)
T 2cs3_A 12 NSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSR 47 (93)
T ss_dssp SCCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHH
T ss_pred CCCeeEeecchhhhccCceeeCCCccCCeeeccccH
Confidence 4578999999999988666556 7999999964
No 122
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.89 E-value=4.6 Score=23.50 Aligned_cols=16 Identities=31% Similarity=0.901 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 7 GLLYDCHICERKFKNE 22 (36)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCccCCH
Confidence 3699999999998764
No 123
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=52.78 E-value=4.8 Score=43.14 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=25.8
Q ss_pred ceeccccccccCCceecCCC-ChhhHHhHh
Q 023002 259 PFACFICRKPFVDPVVTKCK-HYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CG-H~FC~~Ci~ 287 (289)
.|.|||-.+.++|||+++-| |++-+.+|.
T Consensus 891 ~F~cPIs~~lM~DPVilpsG~~TydR~~I~ 920 (968)
T 3m62_A 891 EFLDPLMYTIMKDPVILPASKMNIDRSTIK 920 (968)
T ss_dssp GGBCTTTCSBCSSEEECTTTCCEEEHHHHH
T ss_pred HhCCcchhhHHhCCeEcCCCCEEECHHHHH
Confidence 59999999999999999998 578887775
No 124
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=52.76 E-value=4.7 Score=23.21 Aligned_cols=16 Identities=38% Similarity=0.854 Sum_probs=13.2
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 5 ~k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 5 KRPFVCRICLSAFTTK 20 (35)
T ss_dssp CSCEECSSSCCEESSH
T ss_pred CcCeeCCCCCcccCCH
Confidence 3689999999998754
No 125
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.32 E-value=4.7 Score=23.50 Aligned_cols=16 Identities=25% Similarity=0.814 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 7 GRSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCCEETTTTEECSSH
T ss_pred CCCcCCCCCCCccCCH
Confidence 3689999999999764
No 126
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=51.07 E-value=13 Score=27.49 Aligned_cols=10 Identities=40% Similarity=1.298 Sum_probs=7.0
Q ss_pred CChhhHHhHh
Q 023002 278 KHYFCEHCAL 287 (289)
Q Consensus 278 GH~FC~~Ci~ 287 (289)
.+|||..|..
T Consensus 62 ~~~~C~~C~~ 71 (78)
T 1wew_A 62 ESFYCEICRL 71 (78)
T ss_dssp SSCCCHHHHH
T ss_pred CCEECCCCCc
Confidence 3778887764
No 127
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.76 E-value=5.7 Score=23.82 Aligned_cols=16 Identities=31% Similarity=0.910 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 8 EKPYSCAECKETFSDN 23 (42)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeECCCCCCccCCH
Confidence 3689999999999764
No 128
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.89 E-value=6.3 Score=24.04 Aligned_cols=17 Identities=29% Similarity=0.684 Sum_probs=14.0
Q ss_pred CCceeccccccccCCce
Q 023002 257 SLPFACFICRKPFVDPV 273 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dPV 273 (289)
+.||.|.+|...|..+.
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CCSEECSSSSCEESSSH
T ss_pred CCCeECCCCCchhCCHH
Confidence 36999999999997653
No 129
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=48.55 E-value=3.1 Score=29.93 Aligned_cols=27 Identities=30% Similarity=0.652 Sum_probs=18.7
Q ss_pred eccccccccC-----CceecC---CCChhhHHhHh
Q 023002 261 ACFICRKPFV-----DPVVTK---CKHYFCEHCAL 287 (289)
Q Consensus 261 ~C~IC~~~f~-----dPVvT~---CGH~FC~~Ci~ 287 (289)
.||-|..+.. +-|+-. |||.||+.|..
T Consensus 8 ~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~ 42 (60)
T 1wd2_A 8 ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLG 42 (60)
T ss_dssp CCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCS
T ss_pred ECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCC
Confidence 5777777663 334443 99999999864
No 130
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.96 E-value=6.3 Score=23.62 Aligned_cols=16 Identities=31% Similarity=0.742 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQK 24 (42)
T ss_dssp CCSBCCTTTTCCBSSH
T ss_pred CCCeeCCCccchhCCH
Confidence 3689999999999764
No 131
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.88 E-value=7 Score=24.05 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=13.9
Q ss_pred CCceeccccccccCCce
Q 023002 257 SLPFACFICRKPFVDPV 273 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dPV 273 (289)
+.||.|.+|...|....
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSC 26 (46)
T ss_dssp CCSEECSSSCCEESSSH
T ss_pred CCCeeCcccChhhCCHH
Confidence 36899999999997653
No 132
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=47.88 E-value=2.9 Score=31.95 Aligned_cols=23 Identities=30% Similarity=0.726 Sum_probs=18.6
Q ss_pred CcCCCcccccccCCCceeeeeeccc
Q 023002 189 ICKDYKETGYCGYGDSCKFMHDRGD 213 (289)
Q Consensus 189 iCKDykeTG~CGfGDsCKFlHdR~d 213 (289)
+|.||-. |.|.-+ +|+|+|.-..
T Consensus 45 vC~dflk-G~C~r~-~C~y~H~~~~ 67 (83)
T 3d2n_A 45 ACFDSLK-GRCSRE-NCKYLHPPPH 67 (83)
T ss_dssp CCHHHHT-TCCCCS-SCSSCCCCHH
T ss_pred ehhHhhh-ccccCC-CcceeCChHH
Confidence 5777755 889888 8999998764
No 133
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.60 E-value=8 Score=23.87 Aligned_cols=17 Identities=35% Similarity=0.901 Sum_probs=13.9
Q ss_pred CCceeccccccccCCce
Q 023002 257 SLPFACFICRKPFVDPV 273 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dPV 273 (289)
..||.|.+|...|...-
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 10 EKPYECDVCRKAFSHHA 26 (46)
T ss_dssp SSSCBCTTTCCBCSSSH
T ss_pred CCCcCCCCcCchhCCHH
Confidence 36899999999997643
No 134
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.64 E-value=7 Score=23.57 Aligned_cols=16 Identities=31% Similarity=0.739 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2eos_A 9 EKPYPCEICGTRFRHL 24 (42)
T ss_dssp SCCBCCSSSCCCBSSH
T ss_pred CCCEECCCCCCccCCH
Confidence 3689999999999764
No 135
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.14 E-value=6.1 Score=24.01 Aligned_cols=15 Identities=33% Similarity=0.771 Sum_probs=13.0
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|..+
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2eoj_A 11 NPYECCECGKVFSRK 25 (44)
T ss_dssp CSCEETTTTEECSSH
T ss_pred cCeeCCCCCCccCCH
Confidence 589999999999764
No 136
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.98 E-value=7 Score=23.65 Aligned_cols=16 Identities=31% Similarity=0.706 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2en7_A 10 MKPYVCNECGKAFRSK 25 (44)
T ss_dssp SSSSCCTTTCCCCSSH
T ss_pred CcCeECCCCCCccCCH
Confidence 3689999999999764
No 137
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=45.91 E-value=6.2 Score=23.50 Aligned_cols=15 Identities=20% Similarity=0.795 Sum_probs=12.9
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 5 k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 5 RSYTCSFCKREFRSA 19 (39)
T ss_dssp SSEECTTTCCEESSH
T ss_pred CceECCCCCcccCCH
Confidence 689999999998754
No 138
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.87 E-value=7.7 Score=23.86 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enf_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4689999999999764
No 139
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.83 E-value=7.7 Score=23.95 Aligned_cols=16 Identities=31% Similarity=0.548 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCS 25 (46)
T ss_dssp SCCEECSSSCCEESSS
T ss_pred CCCEECcCCCCcCCCH
Confidence 3689999999999764
No 140
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.74 E-value=7.5 Score=23.98 Aligned_cols=16 Identities=38% Similarity=0.775 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 10 EKPFQCEECGKRFTQN 25 (46)
T ss_dssp SSSBCCSSSCCCBSSH
T ss_pred CcCCCCCCCCcccCCH
Confidence 3689999999999764
No 141
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.61 E-value=5.2 Score=23.75 Aligned_cols=15 Identities=13% Similarity=0.348 Sum_probs=12.8
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 8 HLYYCSQCHYSSITK 22 (37)
T ss_dssp CEEECSSSSCEEECH
T ss_pred cCeECCCCCcccCCH
Confidence 699999999998654
No 142
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=45.55 E-value=7.1 Score=22.63 Aligned_cols=14 Identities=43% Similarity=0.842 Sum_probs=12.0
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|...
T Consensus 2 p~~C~~C~k~F~~~ 15 (33)
T 1rim_A 2 KFACPECPKRFMRS 15 (33)
T ss_dssp CCCCSSSCCCCSSH
T ss_pred cccCCCCCchhCCH
Confidence 79999999999753
No 143
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.37 E-value=6.9 Score=24.01 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 10 EKPYECNECGKAFIWK 25 (44)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCcccCch
Confidence 3699999999999753
No 144
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=45.25 E-value=6.7 Score=23.49 Aligned_cols=16 Identities=31% Similarity=0.748 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|..+
T Consensus 9 ~~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQR 24 (42)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CCCeECCCCCcccCCH
Confidence 3689999999999764
No 145
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.99 E-value=7.8 Score=23.98 Aligned_cols=16 Identities=31% Similarity=0.810 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVS 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcccCCCCCCcccCcH
Confidence 3689999999999764
No 146
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.98 E-value=7.1 Score=23.40 Aligned_cols=16 Identities=25% Similarity=0.561 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 8 QRVYECQECGKSFRQK 23 (41)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCCcCCH
Confidence 3689999999999764
No 147
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.72 E-value=8 Score=23.69 Aligned_cols=16 Identities=31% Similarity=0.638 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWK 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CCCccCCccChhhCCH
Confidence 3689999999999764
No 148
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.35 E-value=8.1 Score=23.75 Aligned_cols=16 Identities=38% Similarity=0.744 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 10 ENPFICSECGKVFTHK 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCEECCccCcccCCH
Confidence 3689999999999764
No 149
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.16 E-value=7.7 Score=23.62 Aligned_cols=17 Identities=29% Similarity=0.573 Sum_probs=13.9
Q ss_pred CCceeccccccccCCce
Q 023002 257 SLPFACFICRKPFVDPV 273 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dPV 273 (289)
+.||.|.+|...|....
T Consensus 10 ~~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 10 SKSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCCEEETTTTEEESSSH
T ss_pred CCCeECcccCcccCCHH
Confidence 36899999999997643
No 150
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=43.88 E-value=6.9 Score=24.99 Aligned_cols=17 Identities=35% Similarity=0.788 Sum_probs=13.9
Q ss_pred CCceeccccccccCCce
Q 023002 257 SLPFACFICRKPFVDPV 273 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dPV 273 (289)
+.||.|.+|...|....
T Consensus 5 ~kp~~C~~C~k~F~~~~ 21 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRP 21 (48)
T ss_dssp TSCEECTTTCCEESSHH
T ss_pred CcCEECCCcCcccCCHH
Confidence 36999999999997643
No 151
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.60 E-value=7.8 Score=23.41 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 10 EKPYECNECQKAFNTK 25 (44)
T ss_dssp CCSEECTTTCCEESCH
T ss_pred CCCeECCCCCcccCCH
Confidence 3689999999999764
No 152
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.55 E-value=7.6 Score=23.79 Aligned_cols=16 Identities=31% Similarity=0.706 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eow_A 10 EKPYKCNECGKAFRAR 25 (46)
T ss_dssp CCCEECTTSCCEESSH
T ss_pred CCCeeccccCChhcCH
Confidence 3689999999999764
No 153
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.50 E-value=7.2 Score=24.01 Aligned_cols=16 Identities=31% Similarity=0.920 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 10 EKPYECKVCSKAFTQK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCcccCCH
Confidence 3689999999999764
No 154
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=43.47 E-value=8.5 Score=23.08 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=13.2
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2el5_A 8 ENPYECSECGKAFNRK 23 (42)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCccCCCcChhhCCH
Confidence 3689999999998754
No 155
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.43 E-value=8.7 Score=23.78 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQA 25 (46)
T ss_dssp CSSCCCSSSCCCCSSH
T ss_pred CCCcCCCCCCCeeCCh
Confidence 4689999999999764
No 156
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.36 E-value=7.5 Score=23.90 Aligned_cols=16 Identities=25% Similarity=0.675 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 10 ERHYECSECGKAFIQK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCCCCCCCCcccCCH
Confidence 3689999999999764
No 157
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.35 E-value=8.8 Score=23.66 Aligned_cols=16 Identities=25% Similarity=0.631 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQS 25 (46)
T ss_dssp CCCCBCSSSCCBCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4689999999999754
No 158
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.34 E-value=7.8 Score=23.75 Aligned_cols=16 Identities=38% Similarity=0.820 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 10 EKPFECSECQKAFNTK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCcCCCCCCcccCCH
Confidence 3689999999999754
No 159
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.31 E-value=8.3 Score=23.70 Aligned_cols=16 Identities=31% Similarity=0.702 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 10 EKPYKCNECGKAFRAH 25 (46)
T ss_dssp SCCCCCTTTTCCCSSH
T ss_pred CCCeECCcCChhhCCH
Confidence 4689999999999764
No 160
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.20 E-value=8.9 Score=23.56 Aligned_cols=17 Identities=35% Similarity=0.712 Sum_probs=13.9
Q ss_pred CCceeccccccccCCce
Q 023002 257 SLPFACFICRKPFVDPV 273 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dPV 273 (289)
..||.|.+|...|..+-
T Consensus 10 ~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRV 26 (46)
T ss_dssp CCSEECTTTCCEESSSH
T ss_pred CCCeECCCCCcccCCHH
Confidence 46899999999997643
No 161
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=43.20 E-value=5 Score=33.19 Aligned_cols=28 Identities=25% Similarity=0.763 Sum_probs=22.2
Q ss_pred eeccccccccC-----CceecCCCChhhHHhHh
Q 023002 260 FACFICRKPFV-----DPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 260 ~~C~IC~~~f~-----dPVvT~CGH~FC~~Ci~ 287 (289)
-.|.+|..+|. .-+-..|.|.+|..|-.
T Consensus 56 ~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 56 NRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred ccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 48999999993 12457899999999964
No 162
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.05 E-value=7.4 Score=23.87 Aligned_cols=16 Identities=31% Similarity=0.837 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yts_A 10 EKPYICNECGKSFIQK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCEECCCCChhhCCh
Confidence 4689999999999754
No 163
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.94 E-value=9 Score=23.44 Aligned_cols=16 Identities=31% Similarity=0.540 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 10 EKPHECRECGKSFSFN 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeeCCCCCchhCCH
Confidence 3689999999999764
No 164
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.90 E-value=8.1 Score=23.76 Aligned_cols=16 Identities=31% Similarity=0.781 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQT 25 (46)
T ss_dssp SCSSSCCSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 3689999999999764
No 165
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.83 E-value=8.2 Score=23.71 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2yti_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCTTCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCh
Confidence 4689999999999764
No 166
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.59 E-value=8.4 Score=23.44 Aligned_cols=16 Identities=19% Similarity=0.440 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 10 RKRYECSKCQATFNLR 25 (44)
T ss_dssp CSSEECTTTCCEESCH
T ss_pred CCCeECCCCCCccCCH
Confidence 3689999999999764
No 167
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=42.34 E-value=11 Score=23.23 Aligned_cols=16 Identities=38% Similarity=0.793 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ely_A 10 EKPFKCVECGKGFSRR 25 (46)
T ss_dssp CCSBCCSSSCCCBSST
T ss_pred CCCcccCccCcccCCH
Confidence 3689999999999764
No 168
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=42.28 E-value=9.2 Score=23.57 Aligned_cols=16 Identities=31% Similarity=0.777 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emk_A 10 EKPYECKECGKAFSQT 25 (46)
T ss_dssp SCSCBCSSSCCBCSCH
T ss_pred CCceECCCCCchhCCH
Confidence 4689999999999764
No 169
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.27 E-value=8.8 Score=23.65 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 10 KKLFKCNECKKTFTQS 25 (46)
T ss_dssp SCCCBCTTTCCBCSSH
T ss_pred CCCEECCccCcccCCH
Confidence 3689999999999764
No 170
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=42.03 E-value=7.5 Score=24.72 Aligned_cols=16 Identities=31% Similarity=0.798 Sum_probs=13.6
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 6 ekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSP 21 (36)
T ss_dssp CCCCEETTTTEECSCH
T ss_pred ccCeECCCCCCccCCH
Confidence 3699999999999764
No 171
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.00 E-value=9.8 Score=23.26 Aligned_cols=16 Identities=31% Similarity=0.549 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 10 EKPCKCTECGKAFCWK 25 (46)
T ss_dssp CCSEECSSSCCEESSS
T ss_pred CCCeeCCCCCCccCCH
Confidence 3689999999999764
No 172
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.94 E-value=7.8 Score=23.75 Aligned_cols=16 Identities=31% Similarity=0.698 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVR 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCCChhhCCH
Confidence 3689999999999764
No 173
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.90 E-value=8.2 Score=23.81 Aligned_cols=16 Identities=31% Similarity=0.737 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCEECcccCCccCCH
Confidence 3689999999998754
No 174
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.56 E-value=9.9 Score=23.24 Aligned_cols=16 Identities=25% Similarity=0.546 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRA 25 (46)
T ss_dssp CCCCCBTTTTBCCSCH
T ss_pred CCCeECCCCCCccCch
Confidence 3689999999999764
No 175
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.40 E-value=8.6 Score=23.70 Aligned_cols=16 Identities=25% Similarity=0.588 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 10 ERHYECSECGKAFARK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCcCCcccCCH
Confidence 3689999999999754
No 176
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.39 E-value=9.2 Score=23.40 Aligned_cols=16 Identities=31% Similarity=0.829 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep1_A 10 EKPYECSDCGKSFIKK 25 (46)
T ss_dssp CCSSCCSSSCCCCSSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 3689999999999754
No 177
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=41.36 E-value=8.4 Score=32.54 Aligned_cols=27 Identities=22% Similarity=0.771 Sum_probs=21.6
Q ss_pred eeccccccccC-----CceecCCCChhhHHhH
Q 023002 260 FACFICRKPFV-----DPVVTKCKHYFCEHCA 286 (289)
Q Consensus 260 ~~C~IC~~~f~-----dPVvT~CGH~FC~~Ci 286 (289)
-.|.+|..+|. --+--.|.|.+|..|-
T Consensus 69 ~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 69 THCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp TBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred ccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 48999999973 2344789999999995
No 178
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.30 E-value=9.4 Score=23.51 Aligned_cols=16 Identities=38% Similarity=0.918 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 10 KKPYECKECRKTFIQI 25 (46)
T ss_dssp SCSCCCSSSCCCCSSH
T ss_pred CCCcCCCCcCchhCCH
Confidence 3689999999999764
No 179
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.08 E-value=11 Score=23.20 Aligned_cols=16 Identities=38% Similarity=0.677 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 10 ERPFKCNECGKGFGRR 25 (46)
T ss_dssp CCSCCCSSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 3689999999999764
No 180
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.04 E-value=9.4 Score=23.45 Aligned_cols=16 Identities=44% Similarity=0.908 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eoq_A 10 EKPFKCDICGKSFCGR 25 (46)
T ss_dssp SCSCCCSSSCCCCSSH
T ss_pred CCCcCCCcCCchhCCH
Confidence 3689999999999764
No 181
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=40.89 E-value=9.9 Score=23.33 Aligned_cols=16 Identities=19% Similarity=0.436 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2em0_A 10 EKTWKCRECDMCFSQA 25 (46)
T ss_dssp CCCCCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 3689999999999764
No 182
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=40.89 E-value=8.9 Score=23.63 Aligned_cols=16 Identities=38% Similarity=0.748 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 10 EKPFECAECGKSFSIS 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCEECCCCCcccCCH
Confidence 3689999999999754
No 183
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.77 E-value=8.9 Score=23.55 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRN 25 (46)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 4689999999999754
No 184
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.77 E-value=10 Score=23.24 Aligned_cols=16 Identities=31% Similarity=0.727 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CcCeECCCCCCeeCCH
Confidence 4689999999999764
No 185
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.67 E-value=9 Score=23.61 Aligned_cols=16 Identities=31% Similarity=0.667 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRH 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCEEccccCcccCCH
Confidence 3689999999999764
No 186
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.58 E-value=9.1 Score=23.43 Aligned_cols=16 Identities=31% Similarity=0.733 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCccCCH
Confidence 4689999999999764
No 187
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.56 E-value=9 Score=23.62 Aligned_cols=16 Identities=31% Similarity=0.816 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em4_A 10 QRPYECIECGKAFKTK 25 (46)
T ss_dssp SSSEECSSSCCEESSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 3689999999999754
No 188
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.50 E-value=11 Score=23.28 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRR 25 (46)
T ss_dssp CSSCBCSSSCCBCSSH
T ss_pred CCCeeCcccCchhCCH
Confidence 4689999999999753
No 189
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.50 E-value=7.9 Score=23.89 Aligned_cols=16 Identities=38% Similarity=0.920 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLS 25 (46)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CCCeECcccChhhCCH
Confidence 3689999999999764
No 190
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.39 E-value=9.2 Score=23.48 Aligned_cols=16 Identities=38% Similarity=0.926 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep2_A 10 EKPYECSICGKSFTKK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCcCCCCCCcccCCH
Confidence 3689999999999764
No 191
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.32 E-value=10 Score=23.23 Aligned_cols=16 Identities=44% Similarity=0.931 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDH 25 (46)
T ss_dssp CCSBCCTTTCCCBSSH
T ss_pred CCCeECCCCCceeCCH
Confidence 3689999999999764
No 192
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.19 E-value=9.3 Score=23.37 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en8_A 10 EKSHTCDECGKNFCYI 25 (46)
T ss_dssp CSSEECTTTCCEESSH
T ss_pred CCCeECCCcCcccCCH
Confidence 3689999999999764
No 193
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.18 E-value=9.7 Score=23.21 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 10 KTTSECQECGKIFRHS 25 (44)
T ss_dssp SCCCCCTTTCCCCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 3689999999999764
No 194
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.14 E-value=8.8 Score=23.57 Aligned_cols=16 Identities=31% Similarity=0.785 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emy_A 10 ENPYECHECGKAFSRK 25 (46)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CcCcCCCCCCcccCcH
Confidence 4689999999999764
No 195
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.14 E-value=9.3 Score=23.37 Aligned_cols=16 Identities=31% Similarity=0.773 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQT 25 (46)
T ss_dssp CCTTCCTTTCCCCSSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 4689999999999764
No 196
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.09 E-value=11 Score=23.09 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSEECSSSCCEESSS
T ss_pred CCCeECCcCCchhCCH
Confidence 4689999999999764
No 197
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.99 E-value=11 Score=23.19 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSK 25 (46)
T ss_dssp CCSCBCSSSCCBCSCH
T ss_pred CCCcCCCccChhhCCh
Confidence 4689999999999764
No 198
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.94 E-value=9 Score=22.96 Aligned_cols=16 Identities=31% Similarity=0.752 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 9 EKPYKCETCGARFVQV 24 (42)
T ss_dssp SCSEECTTTCCEESSH
T ss_pred CCCEeCCCcChhhCCH
Confidence 3689999999998754
No 199
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.83 E-value=9.5 Score=23.33 Aligned_cols=16 Identities=31% Similarity=0.756 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emm_A 10 ERPHKCNECGKSFIQS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCCCCChhhCCH
Confidence 4689999999999764
No 200
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.79 E-value=9.4 Score=23.43 Aligned_cols=16 Identities=38% Similarity=0.980 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emh_A 10 ERPYICTVCGKAFTDR 25 (46)
T ss_dssp CCSEECTTTCCEESSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 3689999999999764
No 201
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.70 E-value=9.8 Score=23.35 Aligned_cols=16 Identities=31% Similarity=0.596 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emp_A 10 VKPYMCNECGKAFSVY 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCeECCCCCchhCCH
Confidence 4689999999999764
No 202
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.68 E-value=10 Score=23.46 Aligned_cols=16 Identities=38% Similarity=0.881 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDN 25 (46)
T ss_dssp CCSSSBTTTTBCCSSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 3689999999999764
No 203
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.63 E-value=9.4 Score=23.44 Aligned_cols=16 Identities=31% Similarity=0.877 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eml_A 10 EKPYECSVCGKAFSHR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCCCcCCccCCH
Confidence 3689999999999754
No 204
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.34 E-value=9.5 Score=23.50 Aligned_cols=16 Identities=25% Similarity=0.700 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 10 EKPYKCVECGKGYKRR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECcccCchhCCH
Confidence 4699999999999764
No 205
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.25 E-value=9.8 Score=23.35 Aligned_cols=16 Identities=38% Similarity=0.864 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 3689999999999764
No 206
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.23 E-value=9.6 Score=23.16 Aligned_cols=16 Identities=38% Similarity=0.877 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSK 23 (44)
T ss_dssp CCCEECSSSSCEESSH
T ss_pred CcCccCCCCCcccCCH
Confidence 3589999999999764
No 207
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.10 E-value=9.6 Score=23.47 Aligned_cols=16 Identities=19% Similarity=0.463 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2em5_A 10 TKSHQCHECGRGFTLK 25 (46)
T ss_dssp SCSEECSSSCCEESSH
T ss_pred CCCeECCcCCCccCCH
Confidence 4689999999999764
No 208
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.09 E-value=9.6 Score=23.47 Aligned_cols=16 Identities=31% Similarity=0.644 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emf_A 10 GKHFECTECGKAFTRK 25 (46)
T ss_dssp SCCEECSSSCCEESCH
T ss_pred CCCeECCCCCchhCCH
Confidence 3689999999999754
No 209
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.88 E-value=9.9 Score=23.33 Aligned_cols=16 Identities=31% Similarity=0.677 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 10 EKPYKCNECGKVFRHN 25 (46)
T ss_dssp SSSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCh
Confidence 4689999999999754
No 210
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.85 E-value=10 Score=23.30 Aligned_cols=16 Identities=38% Similarity=0.715 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2enc_A 10 EKPFKCEECGKGFYTN 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCcCCCCCCCcCCCh
Confidence 3689999999999754
No 211
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.79 E-value=10 Score=23.38 Aligned_cols=16 Identities=38% Similarity=0.766 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 10 EKPFKCKECGKAFRQN 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCEECCcCCchhCCH
Confidence 3689999999999764
No 212
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.76 E-value=8.7 Score=23.55 Aligned_cols=16 Identities=38% Similarity=0.791 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (45)
T 2epu_A 10 QKPFECTHCGKSFRAK 25 (45)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CcCccCCCCCCccCCh
Confidence 3689999999999754
No 213
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.69 E-value=10 Score=23.19 Aligned_cols=16 Identities=31% Similarity=0.652 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCChhhCCH
Confidence 3689999999999764
No 214
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.59 E-value=13 Score=22.71 Aligned_cols=16 Identities=31% Similarity=0.928 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (47)
T 2epx_A 10 KKPYECIECGKAFIQN 25 (47)
T ss_dssp CCSBCCSSSCCCBSSH
T ss_pred CCCEECCccCchhCCh
Confidence 3689999999999764
No 215
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.25 E-value=11 Score=23.17 Aligned_cols=16 Identities=31% Similarity=0.696 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 10 EKPYKCEECGKGFICR 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCccCCCccchhCCH
Confidence 3689999999999764
No 216
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=38.25 E-value=10 Score=23.14 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 10 EKPYNCKECGKSFRWA 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCccccccCCh
Confidence 3699999999999754
No 217
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=38.09 E-value=10 Score=23.12 Aligned_cols=16 Identities=31% Similarity=0.677 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCceECCCCCchhCCH
Confidence 4689999999999754
No 218
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=37.80 E-value=10 Score=23.25 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ema_A 10 EKRYKCNECGKVFSRN 25 (46)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CcCcCCCCCcchhCCH
Confidence 3689999999999753
No 219
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.76 E-value=11 Score=23.09 Aligned_cols=16 Identities=31% Similarity=0.816 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 10 EKPYNCEECGKAFIHD 25 (46)
T ss_dssp CCSEECTTTCCEESSH
T ss_pred CcCccCCCCCCCcCCH
Confidence 3689999999999754
No 220
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=37.38 E-value=9.8 Score=26.47 Aligned_cols=15 Identities=40% Similarity=0.919 Sum_probs=11.8
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 3 Kpy~C~~C~k~F~~~ 17 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDA 17 (60)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCccCCCCCCEeCCH
Confidence 588888888888643
No 221
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.14 E-value=11 Score=23.19 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp SCSEECSSSCCEESSH
T ss_pred CCCEeCCcCCCccCCH
Confidence 4689999999999764
No 222
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.13 E-value=10 Score=23.17 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCcChhhCCH
Confidence 4689999999999754
No 223
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.03 E-value=9.9 Score=23.33 Aligned_cols=16 Identities=25% Similarity=0.642 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNSK 25 (46)
T ss_dssp CCSEEETTTTEEESCH
T ss_pred CCCeECCCCCCccCCH
Confidence 3689999999999764
No 224
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=36.98 E-value=11 Score=23.16 Aligned_cols=16 Identities=31% Similarity=0.752 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCeECCCCCcccCCH
Confidence 3689999999999764
No 225
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.65 E-value=12 Score=23.05 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=13.5
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGS 25 (46)
T ss_dssp CCTTCCSSSCCCCSSH
T ss_pred CCCeeCCCCCcccCCH
Confidence 4689999999999764
No 226
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=36.51 E-value=11 Score=24.07 Aligned_cols=14 Identities=21% Similarity=0.543 Sum_probs=10.5
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|..+
T Consensus 1 p~~C~~C~~~f~~~ 14 (57)
T 1bbo_A 1 KYICEECGIRXKKP 14 (57)
T ss_dssp CCBCTTTCCBCSSH
T ss_pred CCcCCCCcCcCCCH
Confidence 67888888888643
No 227
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.18 E-value=11 Score=23.12 Aligned_cols=16 Identities=31% Similarity=0.683 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytj_A 10 EKPYICAECGKAFTIR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCChhhCCH
Confidence 3689999999999754
No 228
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=36.04 E-value=8.6 Score=22.01 Aligned_cols=14 Identities=43% Similarity=0.909 Sum_probs=11.4
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
||.|.+|...|...
T Consensus 2 p~~C~~C~k~f~~~ 15 (32)
T 2kfq_A 2 AFACPACPKRFMRS 15 (32)
T ss_dssp CSSSSSSCTTHHHH
T ss_pred CCCCCCCCcccCCH
Confidence 79999999888543
No 229
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.90 E-value=12 Score=22.94 Aligned_cols=16 Identities=31% Similarity=0.708 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRH 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCCeeCCh
Confidence 3689999999999764
No 230
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.31 E-value=13 Score=22.60 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 8 NGAFFCNECDCRFSEE 23 (43)
T ss_dssp SCCBCCSSSCCCBSSH
T ss_pred CCCEECCCCCCeeCCh
Confidence 3689999999999764
No 231
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.26 E-value=12 Score=22.88 Aligned_cols=16 Identities=31% Similarity=0.766 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYG 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCcccCcccCCh
Confidence 4689999999999764
No 232
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=34.96 E-value=16 Score=20.26 Aligned_cols=15 Identities=40% Similarity=0.844 Sum_probs=12.6
Q ss_pred Cceecc--ccccccCCc
Q 023002 258 LPFACF--ICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~--IC~~~f~dP 272 (289)
.||.|. +|...|..+
T Consensus 2 k~~~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRN 18 (32)
T ss_dssp CSBCCCCTTCCCCBSSS
T ss_pred CCCcCcCCCCCCccCCH
Confidence 589999 899999765
No 233
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=34.85 E-value=16 Score=29.00 Aligned_cols=30 Identities=17% Similarity=0.364 Sum_probs=25.6
Q ss_pred ceeccccccccC---CceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFV---DPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~---dPVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+. ......=|..||..|..+
T Consensus 88 CF~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~ 120 (123)
T 2l4z_A 88 CLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIR 120 (123)
T ss_dssp TSBCTTTCCBGGGTTCCCBCSSSCCBCHHHHHH
T ss_pred ccCcCcCCCcccccCCceEEECCEEeCHHHhhh
Confidence 589999999996 578888899999999753
No 234
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.79 E-value=13 Score=22.82 Aligned_cols=16 Identities=19% Similarity=0.372 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2yso_A 10 EKSHQCRECGEIFFQY 25 (46)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCEEccccChhhCCH
Confidence 3589999999999764
No 235
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.73 E-value=11 Score=23.04 Aligned_cols=16 Identities=38% Similarity=0.771 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en1_A 10 EKPFKCEECGKRFTQN 25 (46)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CCCeeCCCCCcccCCH
Confidence 3689999999999754
No 236
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.62 E-value=12 Score=22.91 Aligned_cols=16 Identities=25% Similarity=0.721 Sum_probs=13.3
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRK 23 (45)
T ss_dssp CCSSEETTTTEECSCH
T ss_pred CCCCcCCCCCcccCCH
Confidence 3699999999999754
No 237
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.46 E-value=11 Score=23.12 Aligned_cols=16 Identities=31% Similarity=0.773 Sum_probs=13.4
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
..||.|.+|...|..+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en6_A 10 EKPYGCNECGKTFSQK 25 (46)
T ss_dssp SCCEEETTTTEEESSH
T ss_pred CcCeECCCCCcccCch
Confidence 3689999999999764
No 238
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=34.45 E-value=19 Score=28.06 Aligned_cols=28 Identities=25% Similarity=0.650 Sum_probs=22.4
Q ss_pred CCceeccccccccC--CceecCCCChhhHH
Q 023002 257 SLPFACFICRKPFV--DPVVTKCKHYFCEH 284 (289)
Q Consensus 257 ~~p~~C~IC~~~f~--dPVvT~CGH~FC~~ 284 (289)
..+-.|.+|+.... .|+.=.||++||..
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~ 52 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFECRCGNNFCAS 52 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEECTTCCEECTT
T ss_pred ccCccchhhCCeecccCCeEcCCCCEeccc
Confidence 34568999998664 48888999999964
No 239
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.97 E-value=10 Score=26.95 Aligned_cols=30 Identities=13% Similarity=0.327 Sum_probs=24.1
Q ss_pred ceeccccccccC--CceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFV--DPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~--dPVvT~CGH~FC~~Ci~~ 288 (289)
-|.|..|...|. ......=|..||..|..+
T Consensus 31 CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~ 62 (73)
T 1wig_A 31 CALCVRCGQMFAEGEEMYLQGSSIWHPACRQA 62 (73)
T ss_dssp TSCCSSSCCCCCSSCCCEEETTEEECTTHHHH
T ss_pred cCEeCCCCCCCCCCCeeEeeCCEEEChHHChH
Confidence 589999999986 566667788999999754
No 240
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.58 E-value=14 Score=25.69 Aligned_cols=30 Identities=23% Similarity=0.624 Sum_probs=23.2
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.+ .....=|..||..|..+
T Consensus 31 CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~ 61 (70)
T 2d8x_A 31 CFRCDLCQEVLADIGFVKNAGRHLCRPCHNR 61 (70)
T ss_dssp TSBCSSSCCBCSSSCCEEETTEEECHHHHHH
T ss_pred CCEeCCCCCcCCCCccEeECCeEECHHHhhh
Confidence 5889999988865 45556788999998753
No 241
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=33.47 E-value=16 Score=26.14 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=14.0
Q ss_pred CCCceeccccccccCCc
Q 023002 256 DSLPFACFICRKPFVDP 272 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dP 272 (289)
++.||.|.+|...|...
T Consensus 10 ~ekpy~C~~CgK~F~~~ 26 (66)
T 2epp_A 10 EAGILPCGLCGKVFTDA 26 (66)
T ss_dssp CCCCCCCTTTCCCCSCH
T ss_pred CccCcCCCCCCCccCCH
Confidence 34799999999999754
No 242
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=33.37 E-value=19 Score=34.82 Aligned_cols=31 Identities=19% Similarity=0.432 Sum_probs=22.9
Q ss_pred CceeccccccccCCceec--CCCChhhHHhHhc
Q 023002 258 LPFACFICRKPFVDPVVT--KCKHYFCEHCALK 288 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT--~CGH~FC~~Ci~~ 288 (289)
....|.||.+.=.-=+-. .|...||..||..
T Consensus 92 ~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~ 124 (386)
T 2pv0_B 92 YQSYCSICCSGETLLICGNPDCTRCYCFECVDS 124 (386)
T ss_dssp SBCSCTTTCCCSSCEECCSTTCCCEECHHHHHH
T ss_pred CcccceEcCCCCeEEEeCCCCCCcchHHHHHHH
Confidence 456899999875322334 8999999999963
No 243
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.66 E-value=26 Score=26.03 Aligned_cols=29 Identities=17% Similarity=0.375 Sum_probs=22.4
Q ss_pred ceeccccccccCCce-ecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVDPV-VTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~dPV-vT~CGH~FC~~Ci~ 287 (289)
-..|.||+..|..=+ -..|+|.|=..||.
T Consensus 15 i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 15 VKICNICHSLLIQGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SCBCSSSCCBCSSSEECSSSCCEECHHHHH
T ss_pred CCcCcchhhHcccCCccCCCCchhhHHHHH
Confidence 348999999997432 23899999888885
No 244
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=32.45 E-value=13 Score=23.60 Aligned_cols=14 Identities=29% Similarity=0.441 Sum_probs=9.8
Q ss_pred CceeccccccccCC
Q 023002 258 LPFACFICRKPFVD 271 (289)
Q Consensus 258 ~p~~C~IC~~~f~d 271 (289)
.||.|.+|...|..
T Consensus 3 ~~~~C~~C~~~f~~ 16 (57)
T 3uk3_C 3 SSRECSYCGKFFRS 16 (57)
T ss_dssp --CBCTTTCCBCSC
T ss_pred CCccCCCCcchhCC
Confidence 47888888888864
No 245
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=32.42 E-value=14 Score=20.46 Aligned_cols=14 Identities=43% Similarity=1.008 Sum_probs=11.9
Q ss_pred ceecc--ccccccCCc
Q 023002 259 PFACF--ICRKPFVDP 272 (289)
Q Consensus 259 p~~C~--IC~~~f~dP 272 (289)
||.|. +|...|..+
T Consensus 2 p~~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRS 17 (31)
T ss_dssp CCBCCSTTCCCBCSSH
T ss_pred CcCCcCCCCCcccCCH
Confidence 79998 999999764
No 246
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=31.95 E-value=16 Score=23.51 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.2
Q ss_pred CCceeccccccccCCc
Q 023002 257 SLPFACFICRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP 272 (289)
+.||.|.+|...|...
T Consensus 22 ~k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 22 EQPATCPICYAVIRQS 37 (54)
T ss_dssp SCCEECTTTCCEESSH
T ss_pred CCCccCCCCCcccCCH
Confidence 3689999999998753
No 247
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=31.87 E-value=15 Score=24.19 Aligned_cols=15 Identities=27% Similarity=0.607 Sum_probs=12.7
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|++|...|..+
T Consensus 39 ~~~~C~~C~k~f~~~ 53 (66)
T 2drp_A 39 KVYPCPFCFKEFTRK 53 (66)
T ss_dssp CCEECTTTCCEESCH
T ss_pred cCeECCCCCCccCCH
Confidence 589999999998764
No 248
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=30.69 E-value=15 Score=23.63 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=10.8
Q ss_pred ceeccccccccCC
Q 023002 259 PFACFICRKPFVD 271 (289)
Q Consensus 259 p~~C~IC~~~f~d 271 (289)
||.|.+|...|..
T Consensus 2 ~~~C~~C~~~f~~ 14 (60)
T 2adr_A 2 SFVCEVCTRAFAR 14 (60)
T ss_dssp CBCCTTTCCCBSC
T ss_pred cCcCCCCccccCC
Confidence 7889999888864
No 249
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=30.54 E-value=9.6 Score=28.37 Aligned_cols=29 Identities=24% Similarity=0.592 Sum_probs=19.3
Q ss_pred ceeccc--cccccC-----Cceec------CCCChhhHHhHh
Q 023002 259 PFACFI--CRKPFV-----DPVVT------KCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~I--C~~~f~-----dPVvT------~CGH~FC~~Ci~ 287 (289)
-.-||- |...+. .+|+= .|||.||..|..
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~ 66 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKE 66 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTE
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCc
Confidence 345777 766552 23433 699999999964
No 250
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=30.22 E-value=17 Score=24.88 Aligned_cols=29 Identities=28% Similarity=0.560 Sum_probs=22.9
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|..|...+.. .....=|..||..|..
T Consensus 31 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 60 (66)
T 1nyp_A 31 HFVCAKCEKPFLGHRHYERKGLAYCETHYN 60 (66)
T ss_dssp TCBCTTTCCBCSSSCCEEETTEEECHHHHH
T ss_pred cCEECCCCCCCCCCceEeECCcEECHHHHH
Confidence 5889999988865 5566778899998865
No 251
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=30.02 E-value=13 Score=27.92 Aligned_cols=26 Identities=27% Similarity=0.742 Sum_probs=18.1
Q ss_pred ccccccccC-----Cceec-CCCChhhHHhHh
Q 023002 262 CFICRKPFV-----DPVVT-KCKHYFCEHCAL 287 (289)
Q Consensus 262 C~IC~~~f~-----dPVvT-~CGH~FC~~Ci~ 287 (289)
||-|...+. .+|.= .|||.||..|-.
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 887766552 23554 599999998854
No 252
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.59 E-value=17 Score=22.70 Aligned_cols=17 Identities=41% Similarity=0.600 Sum_probs=13.8
Q ss_pred CCCceeccccccccCCc
Q 023002 256 DSLPFACFICRKPFVDP 272 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dP 272 (289)
...||.|.+|...|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (48)
T 2epr_A 9 TRKQVACEICGKIFRDV 25 (48)
T ss_dssp CCCSEEETTTTEEESSH
T ss_pred CCcCeeCCCCCcccCCH
Confidence 44699999999999654
No 253
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.19 E-value=18 Score=24.73 Aligned_cols=15 Identities=33% Similarity=1.112 Sum_probs=12.3
Q ss_pred CCceeccccccccCC
Q 023002 257 SLPFACFICRKPFVD 271 (289)
Q Consensus 257 ~~p~~C~IC~~~f~d 271 (289)
+.||.|.+|...|..
T Consensus 13 ~k~~~C~~C~k~f~~ 27 (77)
T 2ct1_A 13 EKPYECYICHARFTQ 27 (77)
T ss_dssp CCSEECTTTCCEESC
T ss_pred CCCeECCCcCchhCC
Confidence 368999999998864
No 254
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.14 E-value=19 Score=24.92 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=22.8
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|.+|...+.. +....=|..||..|..
T Consensus 33 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~ 62 (72)
T 1wyh_A 33 CFLCSGCEQPLGSRSFVPDKGAHYCVPCYE 62 (72)
T ss_dssp TCBCTTTCCBTTTSCEEEETTEEEEHHHHH
T ss_pred cCeECCCCCcCCCCccCCcCCeEECHHHHH
Confidence 5889999988865 5566678889998864
No 255
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.10 E-value=22 Score=22.81 Aligned_cols=13 Identities=15% Similarity=0.197 Sum_probs=10.7
Q ss_pred CceeccccccccC
Q 023002 258 LPFACFICRKPFV 270 (289)
Q Consensus 258 ~p~~C~IC~~~f~ 270 (289)
.||.|.+|...|.
T Consensus 40 k~~~C~~C~k~F~ 52 (54)
T 2eps_A 40 RPHKCQVWVSGPS 52 (54)
T ss_dssp CCCCSSSSCCSSC
T ss_pred CCccCCCCCCCCC
Confidence 5889999988875
No 256
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=29.07 E-value=17 Score=26.54 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=23.3
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. .....=|..||..|..+
T Consensus 51 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~ 81 (89)
T 1x64_A 51 CFVCADCNLNLKQKGYFFVEGELYCETHARA 81 (89)
T ss_dssp TCCCSSSCCCTTTSCCEEETTEEECHHHHHH
T ss_pred CCEecCCCCCCCCCCeEeECCEEECHHHHHH
Confidence 5889999998865 45556788999998753
No 257
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.88 E-value=27 Score=24.26 Aligned_cols=30 Identities=23% Similarity=0.563 Sum_probs=23.6
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. +....=|..||..|..+
T Consensus 35 CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~ 65 (72)
T 1x4l_A 35 CFNCKKCSLSLVGRGFLTERDDILCPDCGKD 65 (72)
T ss_dssp TCBCSSSCCBCTTSCCEECSSSEECHHHHHT
T ss_pred cCEeccCCCcCCCCccEeECCEEEChhHcCc
Confidence 5899999998864 44557789999999764
No 258
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=28.49 E-value=18 Score=28.73 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=21.2
Q ss_pred CceeccccccccCCceecCCCChhhH
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCE 283 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~ 283 (289)
..-.|..|...-..-|-..|||++|-
T Consensus 23 ~~~~C~~C~~~~~~W~CL~CG~vgCg 48 (109)
T 3c5k_A 23 VTQPCGDCGTIQENWVCLSCYQVYCG 48 (109)
T ss_dssp TTCCCTTTCCCSSEEEETTTCCEEEC
T ss_pred cCCcCccccCCCCeeeeeecCccccC
Confidence 34579999987777788999999993
No 259
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.35 E-value=18 Score=24.40 Aligned_cols=15 Identities=33% Similarity=0.886 Sum_probs=12.5
Q ss_pred CCceeccccccccCC
Q 023002 257 SLPFACFICRKPFVD 271 (289)
Q Consensus 257 ~~p~~C~IC~~~f~d 271 (289)
+.||.|.+|...|..
T Consensus 12 ~k~~~C~~C~k~f~~ 26 (72)
T 1x6e_A 12 EKPYGCVECGKAFSR 26 (72)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCccCCCCCCccCC
Confidence 468999999999864
No 260
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.30 E-value=26 Score=25.65 Aligned_cols=30 Identities=27% Similarity=0.595 Sum_probs=23.2
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. ..+..=|..||..|..+
T Consensus 51 CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~ 81 (90)
T 2dar_A 51 EFNCAHCKNTMAYIGFVEEKGALYCELCYEK 81 (90)
T ss_dssp TCBCSSSCCBCSSSCBEESSSCEECHHHHHH
T ss_pred CCccCCCCCCCCCCEeEeECCEEECHHHHHH
Confidence 5899999988864 45566788999998753
No 261
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=28.29 E-value=22 Score=32.85 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=25.9
Q ss_pred CCceeccccccccCC-----ceecCCCChhhHHhHhcC
Q 023002 257 SLPFACFICRKPFVD-----PVVTKCKHYFCEHCALKV 289 (289)
Q Consensus 257 ~~p~~C~IC~~~f~d-----PVvT~CGH~FC~~Ci~~v 289 (289)
..|-.|.+|...|.- -.-..||..+|..|..+|
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~ 392 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRV 392 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGS
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhC
Confidence 467899999998852 234679999999998764
No 262
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=28.15 E-value=26 Score=28.09 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=24.5
Q ss_pred CceeccccccccCCceecCCCChhhHHhHh
Q 023002 258 LPFACFICRKPFVDPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 258 ~p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~ 287 (289)
-|+.|-.|-..++ -+|.=.-||+|..|+.
T Consensus 27 G~~nCKsCWf~~k-~LV~C~dHYLCl~CLt 55 (99)
T 2ko5_A 27 GPQFCKSCWFENK-GLVECNNHYLCLNCLT 55 (99)
T ss_dssp CCCCCCSSCSCCS-SEEECSSCEEEHHHHH
T ss_pred CcccChhhccccC-CeeeecchhhHHHHHH
Confidence 4899999988877 5667778999999985
No 263
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.91 E-value=28 Score=23.95 Aligned_cols=29 Identities=24% Similarity=0.609 Sum_probs=22.3
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|..|...+.. +....=|..||..|..
T Consensus 31 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~ 60 (70)
T 2d8z_A 31 CFVCTACRKQLSGQRFTARDDFAYCLNCFC 60 (70)
T ss_dssp TSBCSSSCCBCTTSCCEESSSSEECHHHHH
T ss_pred CCccCCCCCcCCcCceEeeCCeEECHHHHH
Confidence 5889999998854 4555668899998864
No 264
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=26.64 E-value=94 Score=23.58 Aligned_cols=29 Identities=24% Similarity=0.502 Sum_probs=22.1
Q ss_pred CCCceeccccccccCC-ceecCCCChhhHH
Q 023002 256 DSLPFACFICRKPFVD-PVVTKCKHYFCEH 284 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~d-PVvT~CGH~FC~~ 284 (289)
...+-.|..|+....- ++.=.||.+||..
T Consensus 22 k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~ 51 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKCRCGSTFCGT 51 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEECTTSCEECTT
T ss_pred cccCccchhhcCcccccceEeccCCEeccc
Confidence 3456789999976543 6777999999964
No 265
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=26.47 E-value=26 Score=26.30 Aligned_cols=30 Identities=27% Similarity=0.735 Sum_probs=20.8
Q ss_pred CCCceeccccccccCCceecCC-CChhhHHhHh
Q 023002 256 DSLPFACFICRKPFVDPVVTKC-KHYFCEHCAL 287 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dPVvT~C-GH~FC~~Ci~ 287 (289)
+++| -|-||.+- ..---.-| |-.||..|..
T Consensus 6 ee~p-WC~ICneD-AtlrC~gCdgDLYC~rC~r 36 (67)
T 2d8v_A 6 SGLP-WCCICNED-ATLRCAGCDGDLYCARCFR 36 (67)
T ss_dssp CCCS-SCTTTCSC-CCEEETTTTSEEECSSHHH
T ss_pred cCCC-eeEEeCCC-CeEEecCCCCceehHHHHH
Confidence 3344 79999987 22333677 8899999975
No 266
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.32 E-value=31 Score=23.85 Aligned_cols=30 Identities=23% Similarity=0.580 Sum_probs=23.8
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. +....=|..||..|..+
T Consensus 33 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 63 (72)
T 1x61_A 33 CFVCSTCRAQLRGQHFYAVERRAYCEGCYVA 63 (72)
T ss_dssp TCBCSSSCCBCTTSCEEESSSCEEEHHHHHH
T ss_pred CCcccccCCcCCcCcCEeeCCeEECHHHHHH
Confidence 5899999999854 46667789999998753
No 267
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=26.01 E-value=16 Score=19.41 Aligned_cols=14 Identities=29% Similarity=0.814 Sum_probs=11.7
Q ss_pred ceecc--ccccccCCc
Q 023002 259 PFACF--ICRKPFVDP 272 (289)
Q Consensus 259 p~~C~--IC~~~f~dP 272 (289)
||.|. +|...|...
T Consensus 2 ~~~C~~~~C~k~f~~~ 17 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDR 17 (29)
T ss_dssp CEEECSTTTCEEESSH
T ss_pred CCCCcCCcCcCccCCH
Confidence 78999 999988764
No 268
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=25.75 E-value=30 Score=23.28 Aligned_cols=16 Identities=25% Similarity=0.646 Sum_probs=13.0
Q ss_pred CCCceeccccccccCC
Q 023002 256 DSLPFACFICRKPFVD 271 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~d 271 (289)
...||.|.+|...|..
T Consensus 14 ~~~~~~C~~C~k~f~~ 29 (74)
T 2lce_A 14 SDKPYKCDRCQASFRY 29 (74)
T ss_dssp CCCSBCCTTSSCCBSC
T ss_pred CCCCeECCCCCceeCC
Confidence 4568999999999864
No 269
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=25.67 E-value=72 Score=24.22 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=20.6
Q ss_pred CceeccccccccC-CceecCCCChhhHH
Q 023002 258 LPFACFICRKPFV-DPVVTKCKHYFCEH 284 (289)
Q Consensus 258 ~p~~C~IC~~~f~-dPVvT~CGH~FC~~ 284 (289)
.+-.|..|+..+- -|+.=.||.+||..
T Consensus 24 ~~nRC~~CrKkvgL~gf~CrCg~~FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCRCGNLFCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTSCEECSS
T ss_pred cCCcChhhCCcccccCeecCCCCEechh
Confidence 3557999998642 36777899999964
No 270
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.39 E-value=22 Score=24.23 Aligned_cols=14 Identities=21% Similarity=0.361 Sum_probs=11.2
Q ss_pred CceeccccccccCC
Q 023002 258 LPFACFICRKPFVD 271 (289)
Q Consensus 258 ~p~~C~IC~~~f~d 271 (289)
.||.|.+|...|..
T Consensus 6 k~~~C~~C~k~f~~ 19 (78)
T 2d9h_A 6 SGLQCEICGFTCRQ 19 (78)
T ss_dssp CCEECSSSCCEESS
T ss_pred cCeECCCCCCeeCC
Confidence 58888888888854
No 271
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.28 E-value=22 Score=22.50 Aligned_cols=16 Identities=19% Similarity=0.401 Sum_probs=13.2
Q ss_pred CCceeccc--cccccCCc
Q 023002 257 SLPFACFI--CRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~I--C~~~f~dP 272 (289)
+.||.|.+ |...|...
T Consensus 7 ekp~~C~~~~C~k~F~~~ 24 (38)
T 2eln_A 7 GILLKCPTDGCDYSTPDK 24 (38)
T ss_dssp CCCEECSSSSCCCEESCH
T ss_pred CCCCCCCCCCCCCccCCH
Confidence 36999986 99999764
No 272
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.15 E-value=29 Score=23.11 Aligned_cols=15 Identities=20% Similarity=0.359 Sum_probs=11.7
Q ss_pred CCceeccccccccCC
Q 023002 257 SLPFACFICRKPFVD 271 (289)
Q Consensus 257 ~~p~~C~IC~~~f~d 271 (289)
+.||.|.+|...|..
T Consensus 7 ~~~~~C~~C~k~f~~ 21 (70)
T 1x5w_A 7 GHPEKCSECSYSCSS 21 (70)
T ss_dssp CCSEECSSSSCEESS
T ss_pred CCCeECCCCCcccCC
Confidence 368899999888854
No 273
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=25.14 E-value=23 Score=23.68 Aligned_cols=15 Identities=40% Similarity=0.939 Sum_probs=11.9
Q ss_pred CceeccccccccCCc
Q 023002 258 LPFACFICRKPFVDP 272 (289)
Q Consensus 258 ~p~~C~IC~~~f~dP 272 (289)
.||.|.+|...|...
T Consensus 48 ~~~~C~~C~~~f~~~ 62 (73)
T 1f2i_G 48 KPFQCRICMRNFSRS 62 (73)
T ss_dssp CCEECTTTCCEESCH
T ss_pred CCeECCCCCchhCCH
Confidence 479999999888654
No 274
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=25.03 E-value=24 Score=20.62 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=12.7
Q ss_pred CCceeccc--cccccCCc
Q 023002 257 SLPFACFI--CRKPFVDP 272 (289)
Q Consensus 257 ~~p~~C~I--C~~~f~dP 272 (289)
..||.|.+ |...|..+
T Consensus 6 ~k~~~C~~~~C~k~f~~~ 23 (37)
T 1va1_A 6 KKQHICHIQGCGKVYGKT 23 (37)
T ss_dssp CCCEECCSTTCCCEESCH
T ss_pred CCCCCCCCCCCCCccCCH
Confidence 36899996 99988754
No 275
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.71 E-value=26 Score=25.22 Aligned_cols=30 Identities=23% Similarity=0.459 Sum_probs=21.3
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
-|.|..|...+..--...=|..||..|..+
T Consensus 41 CF~C~~C~~~L~~~~f~~~g~~yC~~cy~~ 70 (79)
T 2cor_A 41 HFNCANCGKELTADARELKGELYCLPCHDK 70 (79)
T ss_dssp TSBCSSSCCBCCTTCEEETTEEECHHHHHT
T ss_pred CCEeCCCCCccCCCCEeECCEEeCHHHHHH
Confidence 488888888876543455678888888653
No 276
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=24.58 E-value=26 Score=30.04 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=22.2
Q ss_pred CCCceeccccccccCCceec--CCCChhhHHhHhc
Q 023002 256 DSLPFACFICRKPFVDPVVT--KCKHYFCEHCALK 288 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dPVvT--~CGH~FC~~Ci~~ 288 (289)
+.....|.||.+.=.--.-. .|-..||..||..
T Consensus 76 DG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~ 110 (159)
T 3a1b_A 76 DGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL 110 (159)
T ss_dssp TSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHH
T ss_pred CCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHH
Confidence 33456999999864211112 6889999999863
No 277
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=24.43 E-value=50 Score=24.41 Aligned_cols=29 Identities=28% Similarity=0.608 Sum_probs=22.2
Q ss_pred CCCceeccccccccCC-ceecCCCChhhHH
Q 023002 256 DSLPFACFICRKPFVD-PVVTKCKHYFCEH 284 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~d-PVvT~CGH~FC~~ 284 (289)
...+-.|..|++.+.- ++.=.||.+||..
T Consensus 12 k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~ 41 (64)
T 1wfh_A 12 PQRPNRCTVCRKRVGLTGFMCRCGTTFCGS 41 (64)
T ss_dssp CSSCCCCTTTCCCCCTTCEECSSSCEECTT
T ss_pred CCcCCcChhhCCccCccCEEeecCCEeccc
Confidence 3456789999996543 6777999999964
No 278
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=23.83 E-value=65 Score=23.24 Aligned_cols=12 Identities=42% Similarity=1.132 Sum_probs=7.9
Q ss_pred ceeccccccccCC
Q 023002 259 PFACFICRKPFVD 271 (289)
Q Consensus 259 p~~C~IC~~~f~d 271 (289)
...| ||+.++.+
T Consensus 16 ~~~C-~C~~~~~~ 27 (76)
T 1wem_A 16 ALYC-ICRQPHNN 27 (76)
T ss_dssp CCCS-TTCCCCCS
T ss_pred CCEE-ECCCccCC
Confidence 4567 78777654
No 279
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=23.83 E-value=47 Score=23.73 Aligned_cols=9 Identities=44% Similarity=1.342 Sum_probs=7.2
Q ss_pred ChhhHHhHh
Q 023002 279 HYFCEHCAL 287 (289)
Q Consensus 279 H~FC~~Ci~ 287 (289)
+|||..|.+
T Consensus 56 ~~~C~~Cr~ 64 (68)
T 2rsd_A 56 VFYCELCRL 64 (68)
T ss_dssp SCCCHHHHH
T ss_pred cEECcCccC
Confidence 788988865
No 280
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=23.40 E-value=21 Score=22.41 Aligned_cols=14 Identities=29% Similarity=0.508 Sum_probs=11.4
Q ss_pred ceeccccccccCCc
Q 023002 259 PFACFICRKPFVDP 272 (289)
Q Consensus 259 p~~C~IC~~~f~dP 272 (289)
.|.|+||+..+-|+
T Consensus 3 k~~CpvCk~q~Pd~ 16 (28)
T 2jvx_A 3 DFCCPKCQYQAPDM 16 (28)
T ss_dssp CEECTTSSCEESSH
T ss_pred cccCccccccCcCh
Confidence 48999999877665
No 281
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.26 E-value=36 Score=24.89 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=22.5
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|..|...+.+ +....=|..||..|..
T Consensus 42 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 71 (91)
T 2d8y_A 42 CFRCSYCNNKLSLGTYASLHGRIYCKPHFN 71 (91)
T ss_dssp TCBCTTTCCBCCTTTCCCSSSCCCCHHHHH
T ss_pred CCeeCCCCCCCCCCCcEeECCEEECHHHHH
Confidence 5889999888865 4666668889988864
No 282
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.12 E-value=17 Score=27.13 Aligned_cols=28 Identities=21% Similarity=0.433 Sum_probs=22.1
Q ss_pred CCceeccccccccCCc----eecCCCChhhHH
Q 023002 257 SLPFACFICRKPFVDP----VVTKCKHYFCEH 284 (289)
Q Consensus 257 ~~p~~C~IC~~~f~dP----VvT~CGH~FC~~ 284 (289)
..+-.|..|++...-| ..=.||.+||..
T Consensus 13 ~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~ 44 (67)
T 1x4w_A 13 KSRRRCFQCQTKLELVQQELGSCRCGYVFCML 44 (67)
T ss_dssp SCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTT
T ss_pred ccCCcchhhCCeecccccCceEecCCCEehhc
Confidence 3466899999998766 455999999964
No 283
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.07 E-value=36 Score=23.99 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=22.8
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|..|...+.. .....=|..||..|..
T Consensus 41 CF~C~~C~~~L~~~~~~~~~~~~yC~~~y~ 70 (80)
T 1x3h_A 41 CFVCGDCFTSFSTGSFFELDGRPFCELHYH 70 (80)
T ss_dssp TCBCSSSCCBSCSSCCEESSSCEECHHHHH
T ss_pred cCChhhCCCCCCCCcEEeECCEEECHHHHH
Confidence 5889999998865 5566678889988864
No 284
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=23.05 E-value=23 Score=23.69 Aligned_cols=14 Identities=21% Similarity=0.596 Sum_probs=10.9
Q ss_pred CceeccccccccCC
Q 023002 258 LPFACFICRKPFVD 271 (289)
Q Consensus 258 ~p~~C~IC~~~f~d 271 (289)
.||.|.+|...|..
T Consensus 38 k~~~C~~C~k~f~~ 51 (62)
T 1vd4_A 38 GTFRCTFCHTEVEE 51 (62)
T ss_dssp TEEBCSSSCCBCEE
T ss_pred CCEECCCCCCcccc
Confidence 48888888888853
No 285
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=22.97 E-value=53 Score=23.97 Aligned_cols=10 Identities=30% Similarity=1.105 Sum_probs=6.1
Q ss_pred CChhhHHhHh
Q 023002 278 KHYFCEHCAL 287 (289)
Q Consensus 278 GH~FC~~Ci~ 287 (289)
|++||..|..
T Consensus 55 g~w~Cp~C~~ 64 (71)
T 1wen_A 55 GKWFCPRCSQ 64 (71)
T ss_dssp SCCCCTTTSS
T ss_pred CCEECCCCCc
Confidence 5666666653
No 286
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=22.79 E-value=49 Score=24.47 Aligned_cols=27 Identities=30% Similarity=0.536 Sum_probs=21.2
Q ss_pred CceeccccccccCC-ceecCCCChhhHH
Q 023002 258 LPFACFICRKPFVD-PVVTKCKHYFCEH 284 (289)
Q Consensus 258 ~p~~C~IC~~~f~d-PVvT~CGH~FC~~ 284 (289)
.+-.|..|+..+.- ++.=.||.+||..
T Consensus 14 ~~~rC~~C~kkvgl~~f~CrCg~~FC~~ 41 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKCKCGSTFCGS 41 (64)
T ss_dssp CSCSCTTTCCCCTTSCEECTTSCEECSS
T ss_pred cCCcChhhCCcccccCeEeecCCEeccc
Confidence 46689999997543 6777999999963
No 287
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.62 E-value=30 Score=23.50 Aligned_cols=17 Identities=24% Similarity=0.575 Sum_probs=13.7
Q ss_pred CCCceeccccccccCCc
Q 023002 256 DSLPFACFICRKPFVDP 272 (289)
Q Consensus 256 ~~~p~~C~IC~~~f~dP 272 (289)
...||.|.+|...|...
T Consensus 15 ~~~~~~C~~C~~~f~~~ 31 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHS 31 (77)
T ss_dssp CSCSSBCSSSCCBCSCH
T ss_pred CCCCEECCCCCcccCCH
Confidence 45799999999999643
No 288
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=22.58 E-value=29 Score=24.31 Aligned_cols=30 Identities=27% Similarity=0.596 Sum_probs=23.1
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. +....=|..||..|..+
T Consensus 46 CF~C~~C~~~L~~~~f~~~~~~~yC~~cy~~ 76 (77)
T 2egq_A 46 CFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 76 (77)
T ss_dssp TCBCSSSCCBCTTSCCCEETTEECCHHHHHH
T ss_pred cCEehhcCCCCCCCccEeECCEEEChHHhcc
Confidence 5889999998864 35556688999998765
No 289
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=22.48 E-value=26 Score=24.50 Aligned_cols=14 Identities=43% Similarity=0.997 Sum_probs=8.9
Q ss_pred CceeccccccccCC
Q 023002 258 LPFACFICRKPFVD 271 (289)
Q Consensus 258 ~p~~C~IC~~~f~d 271 (289)
.||.|.+|...|..
T Consensus 2 k~~~C~~C~k~f~~ 15 (88)
T 1llm_C 2 KPFQCRICMRNFSR 15 (88)
T ss_dssp CCEECTTTCCEESC
T ss_pred CCCcCCCCCCccCC
Confidence 36777777766643
No 290
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=22.26 E-value=23 Score=23.82 Aligned_cols=13 Identities=46% Similarity=0.984 Sum_probs=8.4
Q ss_pred ceeccccccccCC
Q 023002 259 PFACFICRKPFVD 271 (289)
Q Consensus 259 p~~C~IC~~~f~d 271 (289)
||.|.+|...|..
T Consensus 1 ~~~C~~C~~~f~~ 13 (82)
T 2kmk_A 1 SFDCKICGKSFKR 13 (82)
T ss_dssp CEECSSSCCEESS
T ss_pred CccCCCCcccccC
Confidence 5667777766643
No 291
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=22.14 E-value=19 Score=32.42 Aligned_cols=47 Identities=26% Similarity=0.576 Sum_probs=10.4
Q ss_pred ccCCCCCCCCCcCCceeeeeee-eeecCCCcCCCcccccccCCCceeeeeec
Q 023002 161 SEKAGGSHGPLRASAHIRVTAR-FDYQPDICKDYKETGYCGYGDSCKFMHDR 211 (289)
Q Consensus 161 ~~~~~~~~GPirap~niR~t~~-~DyqPDiCKDykeTG~CGfGDsCKFlHdR 211 (289)
+..+-|+.||--. ..||.... -+-.+-+|-=-| =|.||--|||.|.-
T Consensus 166 pdDplgR~Gp~l~-~~L~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 213 (223)
T 3v33_A 166 PDDPLGRHGPSLD-NFLRKKPLTLEHRKQPCPYGR---KCTYGIKCRFFHPE 213 (223)
T ss_dssp CSSTTCTTSCCHH-HHTBSCC-------------------------------
T ss_pred CCCcccCCCCCHH-HHhccCCCCcccCCCCCCCCc---ccccCCcceecCCc
Confidence 4456688997321 23444332 122233453222 59999999999963
No 292
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=21.61 E-value=25 Score=30.36 Aligned_cols=25 Identities=20% Similarity=0.472 Sum_probs=21.6
Q ss_pred ceeccccccccCCceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVDPVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~dPVvT~CGH~FC~~Ci~~ 288 (289)
...|.+|.+.+.++ |-..|..|+.+
T Consensus 163 ~~~C~~CGE~~~~~-----g~~~C~~C~~~ 187 (191)
T 3d00_A 163 IVLCPQCREAYPAQ-----DGELCLSCQGG 187 (191)
T ss_dssp EEECTTTCCEEEGG-----GCSSCHHHHTT
T ss_pred CEECCcCCCChhhC-----CCcCCccccCC
Confidence 45699999999887 99999999854
No 293
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.25 E-value=41 Score=23.05 Aligned_cols=30 Identities=23% Similarity=0.653 Sum_probs=22.9
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. .....=|..||..|..+
T Consensus 31 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 61 (69)
T 2cur_A 31 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 61 (69)
T ss_dssp TTBCTTTCCBCTTSCEEECSSCEEEHHHHHH
T ss_pred cCEECCCCCCCCCCccEeECCEEECHHHhHH
Confidence 5889999998854 45556688999998753
No 294
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.96 E-value=46 Score=23.56 Aligned_cols=30 Identities=23% Similarity=0.616 Sum_probs=23.6
Q ss_pred ceeccccccccC--Ccee-cCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFV--DPVV-TKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~--dPVv-T~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+. .... ..=|..+|..|..+
T Consensus 41 CF~C~~C~~~L~~g~~f~~~~~~~~~C~~c~~~ 73 (81)
T 1x6a_A 41 CFACMSCKVIIEDGDAYALVQHATLYCGKCHNE 73 (81)
T ss_dssp SCBCTTTCCBCCTTSCEEECSSSCEEEHHHHHH
T ss_pred cCCccCCCCccCCCCcEEEeeCCEEECHHHHHH
Confidence 689999999995 4555 36789999998753
No 295
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.75 E-value=33 Score=24.31 Aligned_cols=29 Identities=21% Similarity=0.608 Sum_probs=22.2
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|.+|...+.. +....=|..||..|..
T Consensus 43 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~ 72 (82)
T 1x63_A 43 CFTCSNCKQVIGTGSFFPKGEDFYCVTCHE 72 (82)
T ss_dssp TCCCSSSCCCCTTSCEEEETTEEEEHHHHH
T ss_pred cCchhhCCCccCCCccEeeCCEEECHHHHH
Confidence 5888999888864 4566678888988864
No 296
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=20.64 E-value=36 Score=26.45 Aligned_cols=29 Identities=28% Similarity=0.512 Sum_probs=23.4
Q ss_pred ceeccccccccC--CceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFV--DPVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~--dPVvT~CGH~FC~~Ci~ 287 (289)
=|.|.+|...|. +.....=|..||..|..
T Consensus 36 CF~C~~C~~~L~~g~~f~~~~g~~yC~~cy~ 66 (123)
T 2l3k_A 36 CFKCAACQKHFSVGDRYLLINSDIVCEQDIY 66 (123)
T ss_dssp TCBCTTTCCBCCTTCEEEECSSSEEEGGGHH
T ss_pred cCccccCCCCCCCCCcEEeeCCEEEcHHHhH
Confidence 588999999983 45677779999999864
No 297
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.63 E-value=21 Score=25.54 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=20.6
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|..|...+.. .....=|..||..|..
T Consensus 41 CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~ 70 (79)
T 1x62_A 41 CYVCTDCGTNLKQKGHFFVEDQIYCEKHAR 70 (79)
T ss_dssp TTSCSSSCCCHHHHCCEESSSCEECHHHHH
T ss_pred cCeeCCCCCCCCCCCeEeECCEEECHHHHH
Confidence 4778888887754 3455667888888864
No 298
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.58 E-value=26 Score=24.53 Aligned_cols=29 Identities=24% Similarity=0.410 Sum_probs=21.5
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHh
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCAL 287 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~ 287 (289)
=|.|..|...+.. +....=|..||..|..
T Consensus 39 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 68 (77)
T 1g47_A 39 CFVCAQCFQQFPEGLFYEFEGRKYCEHDFQ 68 (77)
T ss_dssp TCCCTTTCCCCGGGCSEEETTEEECHHHHH
T ss_pred cCeECCCCCCCCCCCeEeECCeEeCHHHHH
Confidence 4788888888864 5556667888888864
No 299
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=20.55 E-value=41 Score=23.06 Aligned_cols=20 Identities=35% Similarity=0.599 Sum_probs=17.2
Q ss_pred CCCcCCceeeeeeeeeecCC
Q 023002 169 GPLRASAHIRVTARFDYQPD 188 (289)
Q Consensus 169 GPirap~niR~t~~~DyqPD 188 (289)
||+..|.-.+..+.+||+|.
T Consensus 1 gp~~~~~~~~~~al~dy~~~ 20 (67)
T 1aww_A 1 GSMSTSELKKVVALYDYMPM 20 (67)
T ss_dssp CCSSCSCCCEEEBSSCCCCS
T ss_pred CCCCCCCCeEEEECccCCCC
Confidence 78999888888889999874
No 300
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.46 E-value=46 Score=23.40 Aligned_cols=30 Identities=17% Similarity=0.512 Sum_probs=23.3
Q ss_pred ceeccccccccCC-ceecCCCChhhHHhHhc
Q 023002 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALK 288 (289)
Q Consensus 259 p~~C~IC~~~f~d-PVvT~CGH~FC~~Ci~~ 288 (289)
=|.|..|...+.. .....=|..||..|..+
T Consensus 41 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 71 (80)
T 2cuq_A 41 CLVCTGCQTPLAGQQFTSRDEDPYCVACFGE 71 (80)
T ss_dssp TCBCSSSCCBCTTCCEEECSSSEEEHHHHHH
T ss_pred hCCcccCCCcCCCCeeEeECCEEECHHHHHH
Confidence 4889999988863 56667788999988653
No 301
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=20.15 E-value=33 Score=24.65 Aligned_cols=11 Identities=45% Similarity=1.108 Sum_probs=7.9
Q ss_pred CChhhHHhHhc
Q 023002 278 KHYFCEHCALK 288 (289)
Q Consensus 278 GH~FC~~Ci~~ 288 (289)
+.+||..|..+
T Consensus 58 ~~w~C~~C~~~ 68 (75)
T 2k16_A 58 MQWFCPKCANK 68 (75)
T ss_dssp SCCCCTTTHHH
T ss_pred CCEEChhccCc
Confidence 67888888653
Done!