BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023005
(289 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9
PE=2 SV=1
Length = 372
Score = 279 bits (713), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/264 (55%), Positives = 175/264 (66%), Gaps = 48/264 (18%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRC 60
MGYMCDFCG+QRS+VYCRSDAACLCLSCDR+VH ANALSKRHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 AEERVSLCQNCDWIGH---------GTSTSASSHKRQTINCYSGCPSASELSSIWSFVLD 111
EERVSLCQNCDW GH +STS HKRQTI+CYSGCPS+SEL+SIWSF LD
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
Query: 112 FPSGGESACEQELGLMSITDNSIKNSWGPNEDSISQNAAGGGVEANDVCDADKSNVRVGA 171
G+S CEQELG+M+I D+ GP + C+ DK +V VG+
Sbjct: 121 L--AGQSICEQELGMMNIDDD------GPTD--------------KKTCNEDKKDVLVGS 158
Query: 172 TSVPGINSTTQNRDQIHGSANNPPLPKLCCSATKDLAFCEDDDLYEDFNMDEMDLNFENY 231
+S+P +S Q + S+ KD+ CE DD Y + MDE+D+ ENY
Sbjct: 159 SSIPETSSVPQGKS----------------SSAKDVGMCE-DDFYGNLGMDEVDMALENY 201
Query: 232 EELFGVTLNHSEELLENGGIESLF 255
EELFG N SEEL +GGI+SLF
Sbjct: 202 EELFGTAFNPSEELFGHGGIDSLF 225
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 174/280 (62%), Gaps = 41/280 (14%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRC 60
MGYMCDFCG+QRS+VYCRSDAACLCLSCDRNVH ANALSKRHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC 60
Query: 61 AEERVSLCQNCDWIGH--GTSTSASSHKRQTINCYSGCPSASELSSIWSFVLDF--PSGG 116
++ERVSLCQNCDW GH ST+ S HKRQTINCYSGCPS++ELSSIWSF +D S
Sbjct: 61 SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAE 120
Query: 117 ESACEQELGLMSITDNSIKNSWGPNEDSISQNAAGGGVEANDVCDADKSNVRVGATSVPG 176
ESACEQ +GLM+I ++ G G +KS V+ P
Sbjct: 121 ESACEQGMGLMTIDED------------------GTG---------EKSGVQKINVEQPE 153
Query: 177 INSTTQNRDQIHGSANNPPLPKLCCSATKDLAFCEDDDLYEDFNMDEMDLNFENYEELFG 236
+S Q D N+ S K+L CEDD + DE+DL ENYEELFG
Sbjct: 154 TSSAAQGMDHSSVPENS--------SMAKELGVCEDD-FNGNLISDEVDLALENYEELFG 204
Query: 237 VTLNHSEELLENGGIESLFGTKDMSAADSNCQGAVAAEVS 276
N S L E+GGI SLF KD + S Q A++ S
Sbjct: 205 SAFNSSRYLFEHGGIGSLF-EKDEAHEGSMQQPALSNNAS 243
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRC 60
M CDFCG +++++YC+SD+A LCL+CD NVH AN LS+RH+R+LLCE+C+ QP V C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 60
Query: 61 AEERVSLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSIWSFVLD 111
E VSLCQ C W ++ + H+ Q++N YS CPS S+ IWS L+
Sbjct: 61 MNENVSLCQGCQWT--ASNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLE 109
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRC 60
M CD C ++++YC+SD A LCL+CD +VH AN LS RH R+L+CE+C SQPA +RC
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRC 60
Query: 61 AEERVSLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSIWSFVLDFPSGG 116
+E+VS CQ C W H ++ S H+ Q++N +SGCPS ++ + +WS +L+ P G
Sbjct: 61 LDEKVSYCQGCHW--HESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILEPPVSG 114
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 77/106 (72%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEER 64
C+FCG++ ++++CR+D A LCL CD++VH AN LS++H R+ +C+ C+ +P VRC +
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 65 VSLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSIWSFVL 110
+ LCQ CDW HG+ +S+++H+R + +SGCPS EL+++W L
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDL 117
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEER 64
CDFCG++ ++++CR+D A LCL CD+ VH AN LS++H R+ +C+ C ++P VRC +
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 65 VSLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSIWSFVLDFPSGGESACEQEL 124
+ LCQ CDW HG+ + + +H R + +SGCPSA EL+++W LD G + Q
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWG--LDLEQGRKDEENQVP 126
Query: 125 GLMSITDN 132
+ + DN
Sbjct: 127 MMAMMMDN 134
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRC 60
M +C+FC R++VYC +D A LCL+CD VH AN+LS RH RT+LC+ C +QP +VRC
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRC 69
Query: 61 AEERVSLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSIWSF-VLD 111
+ ++ LC C+ HG + S H+R+ + CY+GCP A + + +W F V+D
Sbjct: 70 FDHKMFLCHGCNDKFHGGGS--SEHRRRDLRCYTGCPPAKDFAVMWGFRVMD 119
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
Query: 205 KDLAFCED----DDLYEDFNMDEMDLNFENYEELFG 236
+D+ CED DD DF + ++DL F N+EE FG
Sbjct: 230 QDIGVCEDTICSDD---DFQIPDIDLTFRNFEEQFG 262
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEE 63
+CD+C ++VYC++D+A LCL+CD+ VH+AN L +H R+LLC+ CN P+ + C E
Sbjct: 12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETE 71
Query: 64 RVSLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSI 105
R LCQNCDW H + S+S H R+ ++GCPS EL +I
Sbjct: 72 RSVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAI 111
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana
GN=COL4 PE=2 SV=2
Length = 362
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEE 63
+CD C + +YCR DAA LCLSCD VH AN L+ RH+R +CE C PA V C +
Sbjct: 5 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKAD 64
Query: 64 RVSLCQNCDWIGHGTSTSASSHKRQTINCY 93
+LC CD H + A H+R + +
Sbjct: 65 AAALCVTCDRDIHSANPLARRHERVPVTPF 94
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 3 YMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
+MC+ C + V C++DAA LC++CDR++H AN L++RH R +
Sbjct: 47 WMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPV 91
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEE 63
+CD C + ++CR+DAA LC CD +H AN L+ RH R LCE C PA V C +
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKAD 66
Query: 64 RVSLCQNCDWIGHGTSTSASSHKRQTIN-CYSGCPSASELSSIWSFV 109
+LC CD H + + H+R I Y A SS +FV
Sbjct: 67 AAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFV 113
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 3 YMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
++C+ C + V C++DAA LC++CDR++H AN LS+RH R +
Sbjct: 49 WLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana
GN=COL1 PE=1 SV=1
Length = 355
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 45/86 (52%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEER 64
CD C VYCR+D+A LC SCD VH AN L+ RH R +C+ C PA C +
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71
Query: 65 VSLCQNCDWIGHGTSTSASSHKRQTI 90
SLC CD H + A H+R I
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQRVPI 97
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
+C C + +C++DAA LC +CD +H AN L++RH R +
Sbjct: 54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 47/91 (51%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEER 64
CD C VYC +D+A LC+SCD VH AN ++ RH R +CE C PA C +
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 65 VSLCQNCDWIGHGTSTSASSHKRQTINCYSG 95
SLC CD H + A H+R I SG
Sbjct: 80 ASLCTACDSEVHSANPLARRHQRVPILPISG 110
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
+C+ C + C +D A LC +CD VH AN L++RH R +
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEER 64
CD C VYC +D+A LC +CD VH AN ++ RH R +C+ C S PA C +
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75
Query: 65 VSLCQNCDWIGHGTSTSASSHKRQTI------NCYSGCPSASEL------SSIWSFVLDF 112
SLC CD H + A H+R I +C S PS ++ + S++L
Sbjct: 76 ASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSETDADNDEDDREVASWLL-- 133
Query: 113 PSGGESACEQELGL------MSITD--NSIKNSWGPNEDSISQNAAGG 152
P+ G++ Q G + + D +S+ N + N+ + Q + GG
Sbjct: 134 PNPGKNIGNQNNGFLFGVEYLDLVDYSSSMDNQFEDNQYTHYQRSFGG 181
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
+C C + C++DAA LC +CD +H AN L++RH R +
Sbjct: 58 VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL---------CERC 51
M CD C + + C +D A LC CD VH AN L+ +H R L C+ C
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 52 NSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKR 87
+ A + C E+R LC++CD H +T +++H+R
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQR 96
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTL 46
CD C ++ + ++C D A LC CD H N S H R L
Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFL 98
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 46 LLCERCNSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKRQTINCYS 94
+ C+ C PA + C + +LC CD H + AS H+R ++ S
Sbjct: 3 IQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLS 51
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEER 64
CD C + V+CR D+A LC++CD +H RH R +CE C PA V C +
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADA 77
Query: 65 VSLCQNCDWIGHGTSTSASSHKRQTINCY 93
+LC +CD H + AS H+R + +
Sbjct: 78 AALCVSCDADIHSANPLASRHERVPVETF 106
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 3 YMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRT 45
++C+ C + V C++DAA LC+SCD ++H AN L+ RH R
Sbjct: 59 WVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSR------------TLLC 48
M CD C + + V+C +D A LC CD VH AN L+ +H R + LC
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 49 ERCNSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKR 87
+ C + AL+ C ++R LC++CD H + H R
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDR 99
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
+CD C D++++++C+ D A LC CD ++H AN +K+H R LL
Sbjct: 59 LCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL---------CERC 51
M CD C + V C +D A LC CD +H AN L+ +H R L C+ C
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 52 NSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKR 87
+ A + C E+R LC++CD H ++ +++H+R
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQR 96
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTL 46
CD C ++ + ++C D A LC CD ++H+AN+ S H R L
Sbjct: 57 CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL 98
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 46 LLCERCNSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKRQTINCYS 94
+ C+ C PA V C + +LC CD H + AS H+R +N S
Sbjct: 3 IQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLS 51
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20
PE=1 SV=1
Length = 242
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSR----------TLLCER 50
M C C + + V+C +D A LC CDR+VH AN L+ +H R LC+
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 51 CNSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKR 87
C + AL+ C E+R LC+ CD H + H R
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNR 97
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
+CD CG++R++++C+ D A LC CD +H AN +K+H+R LL
Sbjct: 57 LCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLL 100
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1
PE=2 SV=1
Length = 395
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQP 55
CD C S+VYCR+DAA LC SCD VH AN ++ RH R +CE C P
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACERAP 85
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 48 CERCNSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKRQTI 90
C+ C + P++V C + LC +CD H + AS H+R +
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 1 MGYMCDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL---------CERC 51
M C+ C + V C +D A LC +CD +H AN L+ +H R L C+ C
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 52 NSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKR 87
C ++R LC+ CD H + S+H+R
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQR 96
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
CD C + +C D A LC CD +H N H R LL
Sbjct: 57 CDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLL 99
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVR 59
CD C +R+ YC +D A LC SCD VH AN L++RH R L + PA+V+
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL---KTASPAVVK 68
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 34 LANALSKRHSRTLLCERCNSQPALVRCAEERVSLCQNCDWIGHGTSTSASSHKRQTINCY 93
LANA+ + +R C+ C + A CA + LCQ+CD + H + A H+R +
Sbjct: 5 LANAVGAKTARA--CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62
Query: 94 S 94
S
Sbjct: 63 S 63
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana
GN=COL6 PE=2 SV=2
Length = 406
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
CD C +R+ YC +D A LC +CD +VH AN L++RH R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana
GN=COL7 PE=2 SV=1
Length = 392
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 5 CDFCGDQ-RSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLL 47
CD C + R+ YC +D A LC SCD ++H AN L+KRH R L
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 5 CDFCGDQRSIVYCRSDAACLCLSCDRNVHLANALSKRHSRTLLCERCN 52
C+ C ++ ++ YC SD A LC CD +VH AN ++ +H R +C R N
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER--VCLRTN 66
>sp|P20861|FANG_ECOLX Protein FanG OS=Escherichia coli GN=fanG PE=4 SV=1
Length = 174
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 131 DNSIKNSWGPNEDSISQNAAGGGVEANDVCDADKSNVRVGATSVPGINSTTQNRDQIH 188
D+SI S+ ED IS A N CDA NVR+ VPG N T+ ++ +H
Sbjct: 46 DSSIDFSFVKIEDIISSRATSKEANLNFRCDAHVDNVRI--MFVPGSNRTSSDKRVMH 101
>sp|O75140|DEPD5_HUMAN DEP domain-containing protein 5 OS=Homo sapiens GN=DEPDC5 PE=1 SV=1
Length = 1572
Score = 31.2 bits (69), Expect = 8.2, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 151 GGGVEANDVCDADKSNVRVGATSVPGINSTTQNRDQIHGSANNP--PLPKLCCSATKD 206
G G+ + ++ +V + + S G+N TQN+D + S + P+P CC+ D
Sbjct: 677 GDGMSFLNFSGTEELSVGLLSNSGAGMNPRTQNKDSLEDSVSTSPDPMPGFCCTVGVD 734
>sp|B0G172|PGTB2_DICDI Probable geranylgeranyl transferase type-2 subunit beta
OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1
Length = 339
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 30/118 (25%)
Query: 7 FCGDQRSIVYCR-SDAACLCLSCDRNVHLANALSKRHSRTLLCERCNSQPALVRCAEERV 65
F GDQ V R S AA +CLS +++ N CE+ A E +
Sbjct: 137 FVGDQWGEVDTRFSYAAIMCLSLLKSLDKIN-----------CEK----------AVEYI 175
Query: 66 SLCQNCDWIGHGTSTSASSHKRQTINCYSGCPSASELSSI-------WSFVLDFPSGG 116
CQN D G G+ A SH Q C +E++ I W P+GG
Sbjct: 176 LSCQNFD-GGFGSIPGAESHAGQIFTCVGALSILNEINKIDIDKLGWWLSERQLPNGG 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,668,985
Number of Sequences: 539616
Number of extensions: 4298747
Number of successful extensions: 10666
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10565
Number of HSP's gapped (non-prelim): 91
length of query: 289
length of database: 191,569,459
effective HSP length: 116
effective length of query: 173
effective length of database: 128,974,003
effective search space: 22312502519
effective search space used: 22312502519
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)