BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023007
(288 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 140/233 (60%)
Query: 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
+A+VY G P V+++ L V+ +DV VKMLAAPINPSDIN I+G Y + P++P
Sbjct: 15 RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 74
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
T L PGDWVIP+ GTW++ V + +V D P++ AAT
Sbjct: 75 GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 134
Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
+ VNP TA RML DF L GDS++QN + S VGQ +IQIA G+ +IN++RDR +
Sbjct: 135 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 194
Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
++LK LGA+ V TE +L +K ++P+P L NCVGG S++++L+ L
Sbjct: 195 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQL 247
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 140/233 (60%)
Query: 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
+A+VY G P V+++ L V+ +DV VKMLAAPINPSDIN I+G Y + P++P
Sbjct: 28 RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 87
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
T L PGDWVIP+ GTW++ V + +V D P++ AAT
Sbjct: 88 GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 147
Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
+ VNP TA RML DF L GDS++QN + S VGQ +IQIA G+ +IN++RDR +
Sbjct: 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 207
Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
++LK LGA+ V TE +L +K ++P+P L NCVGG S++++L+ L
Sbjct: 208 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQL 260
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
++AV+Y + G P V+ + E+ + N+V VK L +PINPSDIN+I+GVYP +P
Sbjct: 26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 85
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
+ L GDWVIPS + GTW+++ + + + K
Sbjct: 86 TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
+ + P + ATI VNPLTA ML + L G D +QNG TS VG+
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
QI + +SI++IRDR DE LK LGA +V TE Q K + + +
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 265
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
E L NCVGG S++ + + L
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLN 288
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
++AV+Y + G P V+ + E+ + N+V VK L +PINPSDIN+I+GVYP +P
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 63
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
+ L GDWVIPS + GTW+++ + + + K
Sbjct: 64 TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
+ + P + ATI VNPLTA ML + L G D +QNG TS VG+
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
QI + +SI++IRDR DE LK LGA +V TE Q K + + +
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
E L NCVGG S++ + + L
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLN 266
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
++AV+Y + G P V+ + E+ + N+V VK L +P+NPSDIN+I+GVYP +P
Sbjct: 26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 85
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
+ L GDWVIPS + GTW+++ + + + K
Sbjct: 86 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
+ + P + ATI VNPLTA ML + L G D +QNG TS VG+
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
QI + +SI++IRDR DE LK LGA +V TE Q + + + +
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 265
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
E L NCVGG S++ + + L
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLN 288
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
++AV+Y + G P V+ + E+ + N+V VK L +P+NPSDIN+I+GVYP +P
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
+ L GDWVIPS + GTW+++ + + + K
Sbjct: 64 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
+ + P + ATI VNPLTA ML + L G D +QNG TS VG+
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
QI + +SI++IRDR DE LK LGA +V TE Q + + + +
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
E L NCVGG S++ + + L
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLN 266
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 28/263 (10%)
Query: 48 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
++AV+Y + G P V+ + E+ + N+V VK L +P+NPSDIN+I+GV P +P
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAK 63
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
+ L GDWVIPS + GTW+++ + + + K
Sbjct: 64 TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
+ + P + ATI VNPLTA ML + L G D +QNG TS VG+
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
QI + +SI++IRDR DE LK LGA +V TE Q + + + +
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
E L NCVGG S++ + + L
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLN 266
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 9/241 (3%)
Query: 44 MSPPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVR 102
MS K + + + G P V++ +E +E +K+N+V V+ML PINPSD+ I G Y R
Sbjct: 1 MSLHGKLIQFHKFGNPKDVLQ-VEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHR 59
Query: 103 PKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
+P +R G V+P GTWQ Y VK + + DS
Sbjct: 60 IPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPL-RGEGTWQEY-VKTSADFVVPIPDSI 117
Query: 163 MEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
++ AA + +NPLTA + L D ++ N S +G Q+++ I + R
Sbjct: 118 DDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR 177
Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
+ ++ E+L LGA V S + L N + +GG +++ L
Sbjct: 178 N----NKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSL 233
Query: 282 R 282
R
Sbjct: 234 R 234
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 52 VYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXX 110
V+E GP V+K+ V + K++ V +K+ A +NP + G Y +P +P
Sbjct: 35 VFEFGGP--EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPG 92
Query: 111 XXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170
+ GD V S SG + Y + +K+ + + A I
Sbjct: 93 SDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIG 152
Query: 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK 230
+ TA R L + +G+S++ +GA+ VG QIAR G+ I AG++E +
Sbjct: 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK----ILGTAGTEEGQ 208
Query: 231 EKLKGLGADEVFTESQL 247
+ + GA EVF ++
Sbjct: 209 KIVLQNGAHEVFNHREV 225
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 31/224 (13%)
Query: 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
+AVV G P+ V+++ +LP E +V V++ AA +N D+ +GV + +P
Sbjct: 2 RAVVMRARGGPE-VLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSS--------------------------GT 142
APGD V+ +P S GT
Sbjct: 61 LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
+ YVV ++ K+ E AA I + LTA +M+ D + GD ++ A S V
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180
Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246
IQIA+ G I AGS++ + K LGADE +
Sbjct: 181 VAAIQIAKLFGARVIAT----AGSEDKLRRAKALGADETVNYTH 220
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK---- 104
KA+ +++ GPP V+K+++ P E ++N +K+ AA +NP D G V K
Sbjct: 8 KAIQFDQFGPP-KVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 105 VPXXXXXXXXXXXXXXXXXXTRLAPGDWV-----IPSPPSSGTWQSYVVKD-QSVWHKVS 158
+P + GD V P P + YV ++ K+
Sbjct: 67 LPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCC--YAEYVCASPDTIIQKLE 124
Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
K S ++ AA++ LTAL+ L + GD ++ + VG IQ+A+ +G I
Sbjct: 125 KLSFLQ-AASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVIT 182
Query: 219 IIRDRAGSDEAKEKLKGLGADE 240
R + LK LGA++
Sbjct: 183 TASKRNHA-----FLKALGAEQ 199
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 33/240 (13%)
Query: 47 PSKAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
P AV +++ G P+++ +K + P E +V +K+ A+ +N +D+ + +G Y P
Sbjct: 6 PMLAVHFDKPGGPENLYVKEVAKP--SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA 63
Query: 106 PXXXXXXXXXXXXXXXXXXTRLAPG--------DWVIPSPPSSGTWQSYVVKDQSVWHKV 157
L PG D + P G Q YV + + +
Sbjct: 64 -------SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ-YVTVPEGLLMPI 115
Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
+ + AA I LTA ++L + +GD ++ + S VG IQ+ R G +I
Sbjct: 116 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AI 173
Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTE-----SQLEVKNVKGLLANLPEPALGFNCVGGN 272
++ AGS + + + LGA F S+ +K KG NL +C+GG+
Sbjct: 174 PLV--TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI-----LDCIGGS 226
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 73 VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDW 132
+ + +V + M AA +N D G+YP + T LAPGD
Sbjct: 236 LGDGEVRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDR 291
Query: 133 VIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI 192
V+ P + + V D + ++ AA++ + LTA L D L G+S+
Sbjct: 292 VMGMIPKA--FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESL 349
Query: 193 VQNGATSIVGQCIIQIARHRG 213
+ + A VG IQ+ARH G
Sbjct: 350 LVHSAAGGVGMAAIQLARHLG 370
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 21/180 (11%)
Query: 76 NDVCVKMLAAPINP---SDINRIEGVY--PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPG 130
NDV VK L +P S + +IEG Y P P + G
Sbjct: 41 NDVVVKNLYLSCDPYMRSRMRKIEGSYVESFAPGSPITGYGVAKVLESGD----PKFQKG 96
Query: 131 DWVIPSPPSSGTWQSY--VVKDQSVWHKVSKDSPMEYAATIIVNP-LTALRMLEDFTTLN 187
D V W+ Y + Q+++ KD P+ Y I+ P +TA + +
Sbjct: 97 DLVWGMT----GWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPK 152
Query: 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ 246
G+++ + A+ VGQ + Q A+ G + + AGS E + LK G DE F +
Sbjct: 153 KGETVFVSAASGAVGQLVGQFAKMLGCYVVG----SAGSKEKVDLLKSKFGFDEAFNYKE 208
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 33/237 (13%)
Query: 50 AVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
AV +++ G P+++ +K + P E +V +K+ A+ +N +D+ + +G Y P
Sbjct: 25 AVHFDKPGGPENLYVKEVAKP--SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA--- 79
Query: 109 XXXXXXXXXXXXXXXXTRLAPG--------DWVIPSPPSSGTWQSYVVKDQSVWHKVSKD 160
L PG D + P G Q YV + + + +
Sbjct: 80 ----SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ-YVTVPEGLLMPIPEG 134
Query: 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
+ AA I LTA ++L + +GD ++ + S VG IQ+ R G +I ++
Sbjct: 135 LTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLV 192
Query: 221 RDRAGSDEAKEKLKGLGADEVFTE-----SQLEVKNVKGLLANLPEPALGFNCVGGN 272
AGS + + + LGA F S+ +K KG NL +C+GG+
Sbjct: 193 --TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI-----LDCIGGS 242
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 181
L G V+ SP W ++ + D K+ + P+ A + P LTA L
Sbjct: 99 LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 154
Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
+ + G++++ N A VG + QIA+ +G + + GSDE L+ LG D V
Sbjct: 155 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 210
Query: 242 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVL 278
F K V+ L L + + G++C VGG ++ V+
Sbjct: 211 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVI 247
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 181
L G V+ SP W ++ + D K+ + P+ A + P LTA L
Sbjct: 78 LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 133
Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
+ + G++++ N A VG + QIA+ +G + + GSDE L+ LG D V
Sbjct: 134 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 189
Query: 242 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVL 278
F K V+ L L + + G++C VGG ++ V+
Sbjct: 190 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVI 226
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 143 WQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGA 197
W ++ + D K+ + P+ A I P LTA L + + G++++ + A
Sbjct: 95 WTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAA 154
Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
VG + QIA+ +G + AGSDE LK +G D F K V L
Sbjct: 155 AGAVGSVVGQIAKLKGCKVVG----AAGSDEKIAYLKQIGFDAAFN-----YKTVNSLEE 205
Query: 258 NLPEPA-LGFNC----VGGNSASKVLKFLR 282
L + + G++C VGG + VL ++
Sbjct: 206 ALKKASPDGYDCYFDNVGGEFLNTVLSQMK 235
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 144 QSYVVKDQSVWHKVS-KDSPM-EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV 201
Q Y + + ++KV +P+ Y + + + +TA L D +G+++V +GA V
Sbjct: 103 QDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAV 162
Query: 202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN---VKGLLAN 258
G QIAR +G + I G+++ + ++ LG D ++ KN GL
Sbjct: 163 GSVAGQIARLKGCRVVGIA---GGAEKCRFLVEELGFD-----GAIDYKNEDLAAGLKRE 214
Query: 259 LPEPA-LGFNCVGGNSASKVLKFLRFR 284
P+ + F+ VGG VL + F+
Sbjct: 215 CPKGIDVFFDNVGGEILDTVLTRIAFK 241
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXX 121
VIK + P + E ++ +K +N + +G+YP P
Sbjct: 22 VIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK--PYVLGREASGTVVAKG 79
Query: 122 XXXTRLAPGDWVIPSPPSSGTWQSYV-VKDQSVWHKVSK---DSPMEYAATIIVNPLTAL 177
T GD V + S+ T+ Y + Q K+ K D ++ A ++ LTAL
Sbjct: 80 KGVTNFEVGDQV--AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTAL 137
Query: 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG 237
+ + GD ++ A VG + Q+ + +G H+I + A +DE + K G
Sbjct: 138 SFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAV----ASTDEKLKIAKEYG 193
Query: 238 ADEVFTESQ-------LEVKNVKGLLANLPEPALGFNCVGGNS 273
A+ + S+ L+ N KG+ A+ F+ VG ++
Sbjct: 194 AEYLINASKEDILRQVLKFTNGKGVDAS-------FDSVGKDT 229
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 225
A+ VNPLTAL +E L ++V A S +GQ + QI GI +NI+R +
Sbjct: 150 GASSFVNPLTALGXVET-XRLEGHSALVHTAAASNLGQXLNQICLKDGIKLVNIVRKQ-- 206
Query: 226 SDEAKEKLKGLGADEV 241
E + LK GA V
Sbjct: 207 --EQADLLKAQGAVHV 220
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
E A IVNPLTA+ D + V S + + II +A+ G I +R
Sbjct: 141 EDGAAXIVNPLTAIAXF-DIVKQEGEKAFVXTAGASQLCKLIIGLAKEEGFRPIVTVR-- 197
Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
DE LK +GA V E + + + +P + + V G AS +
Sbjct: 198 --RDEQIALLKDIGAAHVLNEKAPDFEATLREVXKAEQPRIFLDAVTGPLASAIF 250
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 49 KAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
KAV Y + P D+ + IELP +D+ V++ A +NP D Y VR P
Sbjct: 24 KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVD-------YKVRRSTP 76
Query: 107 ------XXXXXXXXXXXXXXXXXXTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVS 158
T PGD V S GT + + D+ + +
Sbjct: 77 PDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKP 136
Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLN-----SGDSIVQNGATSIVGQCIIQIARHRG 213
K AA + + +TA D +N + +I+ G VG +QIAR R
Sbjct: 137 KTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQR- 195
Query: 214 IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV 269
+ +I A E +E +K LGA V S+ V L L PA F+
Sbjct: 196 -TDLTVIA-TASRPETQEWVKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFVFSTT 247
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 72/201 (35%), Gaps = 28/201 (13%)
Query: 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXX 122
+K+ E P E E+D+ V+ LA +N D +E + P
Sbjct: 41 LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGK 100
Query: 123 XXTRLAPGDWVIPS----------PPSS-------------GTWQSYVVKDQSVWHKVSK 159
TR PGD VI + P + G YVV + + K
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPK 160
Query: 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
A+T+ LTA L + L +GD +V G T V +QIA+ G I
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVT 219
Query: 220 IRDRAGSDEAKEKLKGLGADE 240
R E ++ LGAD
Sbjct: 220 SSSR----EKLDRAFALGADH 236
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 6/170 (3%)
Query: 53 YEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXX 112
+ + G P+ V++ +E P + EN++ V+ A IN D G+YP P +P
Sbjct: 7 FHKHGGPE-VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTE 64
Query: 113 XXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSY--VVKDQSVWHKVSKDSPMEYAATII 170
+ GD V+ + + G + S ++ D++ + E AA
Sbjct: 65 AAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAI--LPAAISFEQAAASF 122
Query: 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
+ LT +L + + + + A VG Q A+ G I +
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 172
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 156 KVSKDSPME--YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG 213
KV KD ++ + A +++ +TA +L + GD ++ + A +G ++ ARH G
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG 170
Query: 214 IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS 273
I + ++E E + LG S + V + + ++ +G ++
Sbjct: 171 ATVIGTVS----TEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT 226
Query: 274 ASKVLKFLRFR 284
K L LR R
Sbjct: 227 LQKSLDCLRPR 237
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 225
AAT V LTA L + L+ G+ ++ + AT VG + IA+ G I AG
Sbjct: 16 AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGAR----IYTTAG 71
Query: 226 SDEAKEKLKGLGADEV-------FTESQLEVKNVKGL 255
SD +E L LG + V F + LE+ + G+
Sbjct: 72 SDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGV 108
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 160 DSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
D P+ Y ++ P +TA + + G+++ + A+ VGQ + Q+A+ G + +
Sbjct: 126 DVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVG 185
Query: 219 IIRDRAGSDEAKEKLKG-LGADEVF 242
AGS E + LK G D+ F
Sbjct: 186 ----SAGSKEKVDLLKTKFGFDDAF 206
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT 185
R A G V+ P+ G S ++ + W +V +E AA++ + TA L
Sbjct: 1606 RDASGRRVMGMVPAEGLATSVLLLQHATW-EVPSTWTLEEAASVPIVYTTAYYSLVVRGR 1664
Query: 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 234
+ G+S++ + + VGQ I IA RG + GS E + L+
Sbjct: 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTV----GSAEKRAYLQ 1709
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 64/182 (35%), Gaps = 7/182 (3%)
Query: 57 GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXX 116
GP VI LP E +V V+ A +N DI + +G YP
Sbjct: 39 GPDVXVIGKRPLPVA--GEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGE 96
Query: 117 XXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 176
+ A GD V + G + Y + K AA + T
Sbjct: 97 IVGVGPGVSGYAVGDKVC-GLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTV 155
Query: 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL 236
L L G+S++ +G TS +G IQ+AR G + AGS E + L
Sbjct: 156 WANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAE----VYATAGSTGKCEACERL 211
Query: 237 GA 238
GA
Sbjct: 212 GA 213
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 83/220 (37%), Gaps = 36/220 (16%)
Query: 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
KA V E+ P IK +E P + E V V++ A + +D++ G +PV+PK+P
Sbjct: 2 KAAVVEQFKEPLK-IKEVEKPTISYGE--VLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWV-IPSPPSSGTWQSYVVKDQSVWHKVSKDS------ 161
T L GD V IP S+ Y + Q + K++
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 162 --------------------PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV 201
E AA I +T + L+ T G+ + G +
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGL- 176
Query: 202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
G +Q A+ G +N++ G DE E K LGAD V
Sbjct: 177 GHVAVQYAKAMG---LNVVAVDIG-DEKLELAKELGADLV 212
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
KA V E+ P IK +E P + E V V++ A + +D++ G +PV+PK+P
Sbjct: 2 KAAVVEQFKEPLK-IKEVEKPTISYGE--VLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWV-IPSPPSSGTWQSYVVKDQSVWHKVSKDS------ 161
T L GD V IP S+ Y + Q + K++
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 162 --------------------PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV 201
E AA I +T + L+ T G+ + G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGF- 176
Query: 202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
G +Q A+ G +N++ G DE E K LGAD V
Sbjct: 177 GHVAVQYAKAMG---LNVVAVDIG-DEKLELAKELGADLV 212
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA-ATIIVNPLTALR-------- 178
PGD+V P SG + ++++ + V+ D+P ++A AT +V A+
Sbjct: 336 GPGDFVSRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALATRLVEARAAIEPARLADLS 395
Query: 179 -MLEDFTTLNSGD 190
+ DF N GD
Sbjct: 396 NSMRDFVRANEGD 408
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 139 SSGTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 197
+ G + Y VV ++ W K+ + +YA +++ P T + D+++ GA
Sbjct: 133 ADGGFSEYAVVPAKNAW-KIPEAVADQYA--VMIEPFTIAANVTGHGQPTENDTVLVYGA 189
Query: 198 TSIVGQCIIQIARHRGIHSIN--IIRDRAGSDEAKEKLKGLGADEVFTESQ 246
I G I+Q+ + G++++ I+ DR DE EK K GAD SQ
Sbjct: 190 GPI-GLTIVQVLK--GVYNVKNVIVADRI--DERLEKAKESGADWAINNSQ 235
>pdb|1A76|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
pdb|1A77|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
Length = 326
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 138 PSSGTWQ-SYVVKDQSVWHKVSKD-SPMEYAATIIVNPLTALRMLEDFTTLNS 188
PS G Q SY+ K VW VS+D + Y A +V LT + + + LN
Sbjct: 150 PSEGEAQASYMAKKGDVWAVVSQDYDALLYGAPRVVRNLTTTKEMPELIELNE 202
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,271,659
Number of Sequences: 62578
Number of extensions: 263089
Number of successful extensions: 757
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 705
Number of HSP's gapped (non-prelim): 48
length of query: 288
length of database: 14,973,337
effective HSP length: 98
effective length of query: 190
effective length of database: 8,840,693
effective search space: 1679731670
effective search space used: 1679731670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)