Query 023007
Match_columns 288
No_of_seqs 133 out of 1853
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 07:46:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023007.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023007hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0604 Qor NADPH:quinone redu 100.0 8.5E-46 1.8E-50 328.0 26.8 235 48-288 1-238 (326)
2 COG1064 AdhP Zn-dependent alco 100.0 6.6E-45 1.4E-49 316.3 23.9 228 45-288 1-256 (339)
3 KOG1197 Predicted quinone oxid 100.0 4.3E-40 9.2E-45 269.2 22.0 236 45-288 6-242 (336)
4 KOG0024 Sorbitol dehydrogenase 100.0 2.6E-40 5.7E-45 279.9 21.2 233 45-288 2-270 (354)
5 COG1062 AdhC Zn-dependent alco 100.0 6.4E-39 1.4E-43 273.8 22.4 231 47-288 2-282 (366)
6 PLN02740 Alcohol dehydrogenase 100.0 4.7E-38 1E-42 285.8 27.3 235 44-288 7-297 (381)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 4.4E-38 9.6E-43 285.1 26.8 232 48-288 1-287 (371)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 6E-38 1.3E-42 283.0 27.4 231 47-288 1-273 (358)
9 cd08239 THR_DH_like L-threonin 100.0 6.6E-38 1.4E-42 280.6 27.0 230 48-288 1-259 (339)
10 KOG0025 Zn2+-binding dehydroge 100.0 4.3E-38 9.4E-43 261.7 23.2 248 41-288 13-260 (354)
11 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.7E-37 5.9E-42 279.6 27.8 230 48-288 2-284 (368)
12 KOG0023 Alcohol dehydrogenase, 100.0 1.7E-37 3.8E-42 262.2 22.1 236 43-288 5-276 (360)
13 KOG0022 Alcohol dehydrogenase, 100.0 1.5E-37 3.2E-42 261.6 21.0 232 45-286 5-289 (375)
14 cd08300 alcohol_DH_class_III c 100.0 8.8E-37 1.9E-41 276.3 27.7 231 47-288 2-285 (368)
15 cd08301 alcohol_DH_plants Plan 100.0 2.3E-36 4.9E-41 273.8 27.3 231 47-288 2-286 (369)
16 cd08292 ETR_like_2 2-enoyl thi 100.0 5E-36 1.1E-40 266.3 28.1 234 48-288 1-235 (324)
17 cd08291 ETR_like_1 2-enoyl thi 100.0 6E-36 1.3E-40 266.3 27.4 234 48-288 1-239 (324)
18 PLN02827 Alcohol dehydrogenase 100.0 5.2E-36 1.1E-40 272.0 27.3 230 45-288 10-292 (378)
19 PRK09880 L-idonate 5-dehydroge 100.0 8.5E-36 1.8E-40 267.5 26.0 226 46-288 3-263 (343)
20 PLN02586 probable cinnamyl alc 100.0 1E-35 2.2E-40 268.5 26.4 231 45-288 10-275 (360)
21 cd08277 liver_alcohol_DH_like 100.0 1.7E-35 3.6E-40 267.7 27.6 230 47-288 2-283 (365)
22 TIGR02819 fdhA_non_GSH formald 100.0 2.3E-35 5E-40 268.6 27.3 230 47-288 2-296 (393)
23 cd08290 ETR 2-enoyl thioester 100.0 4.1E-35 8.9E-40 262.5 27.0 239 48-288 1-248 (341)
24 PLN02178 cinnamyl-alcohol dehy 100.0 1.6E-34 3.5E-39 261.7 27.5 229 49-288 6-270 (375)
25 cd08293 PTGR2 Prostaglandin re 100.0 1.6E-34 3.5E-39 259.1 26.9 219 61-288 21-251 (345)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.4E-34 3.1E-39 258.0 26.0 221 51-288 2-251 (329)
27 PRK10309 galactitol-1-phosphat 100.0 3E-34 6.6E-39 257.8 27.0 227 48-288 1-257 (347)
28 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.4E-34 5.2E-39 256.9 26.1 232 49-288 1-244 (336)
29 cd08231 MDR_TM0436_like Hypoth 100.0 4.1E-34 8.9E-39 258.2 27.3 230 49-288 2-277 (361)
30 TIGR03201 dearomat_had 6-hydro 100.0 2.2E-34 4.8E-39 258.9 25.3 227 51-288 2-269 (349)
31 cd08230 glucose_DH Glucose deh 100.0 2.4E-34 5.3E-39 259.2 25.3 228 48-288 1-266 (355)
32 cd08233 butanediol_DH_like (2R 100.0 6.7E-34 1.4E-38 255.9 27.0 229 48-288 1-269 (351)
33 PLN02514 cinnamyl-alcohol dehy 100.0 6.1E-34 1.3E-38 256.7 26.7 228 47-288 9-272 (357)
34 cd08295 double_bond_reductase_ 100.0 5.4E-34 1.2E-38 255.3 26.2 229 48-288 8-248 (338)
35 cd08246 crotonyl_coA_red croto 100.0 6.7E-34 1.5E-38 259.7 27.2 240 44-288 9-312 (393)
36 cd08294 leukotriene_B4_DH_like 100.0 8E-34 1.7E-38 252.8 26.6 225 47-288 2-238 (329)
37 TIGR02825 B4_12hDH leukotriene 100.0 8.5E-34 1.8E-38 252.6 26.3 211 61-288 17-234 (325)
38 cd05284 arabinose_DH_like D-ar 100.0 1.6E-33 3.5E-38 252.1 27.0 232 48-288 1-263 (340)
39 PRK10754 quinone oxidoreductas 100.0 1.9E-33 4E-38 250.4 26.2 235 47-288 1-236 (327)
40 COG1063 Tdh Threonine dehydrog 100.0 1.4E-33 3E-38 253.0 25.2 230 48-288 1-266 (350)
41 PTZ00354 alcohol dehydrogenase 100.0 4.6E-33 9.9E-38 248.1 27.6 235 47-288 1-237 (334)
42 cd08278 benzyl_alcohol_DH Benz 100.0 3.8E-33 8.2E-38 252.3 27.3 230 47-288 2-282 (365)
43 PLN03154 putative allyl alcoho 100.0 6.3E-33 1.4E-37 249.2 28.4 231 47-288 8-255 (348)
44 cd08237 ribitol-5-phosphate_DH 100.0 1.6E-33 3.5E-38 252.5 24.0 217 48-288 3-253 (341)
45 cd08285 NADP_ADH NADP(H)-depen 100.0 8.4E-33 1.8E-37 248.7 27.9 229 48-288 1-263 (351)
46 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.7E-33 3.7E-38 248.9 22.9 216 47-288 1-228 (308)
47 TIGR01751 crot-CoA-red crotony 100.0 8.3E-33 1.8E-37 252.9 27.1 240 44-288 4-307 (398)
48 cd08296 CAD_like Cinnamyl alco 100.0 2.1E-32 4.7E-37 244.4 27.7 227 48-288 1-256 (333)
49 cd08297 CAD3 Cinnamyl alcohol 100.0 2.4E-32 5.1E-37 244.7 27.5 233 48-288 1-262 (341)
50 cd08274 MDR9 Medium chain dehy 100.0 1.5E-32 3.3E-37 246.6 26.2 232 48-288 1-270 (350)
51 cd08289 MDR_yhfp_like Yhfp put 100.0 1.8E-32 3.9E-37 243.7 26.4 232 48-288 1-240 (326)
52 cd08299 alcohol_DH_class_I_II_ 100.0 2.3E-32 5E-37 247.8 27.5 230 47-288 7-289 (373)
53 cd08238 sorbose_phosphate_red 100.0 1.3E-32 2.7E-37 252.5 25.9 232 47-288 2-285 (410)
54 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3E-32 6.5E-37 242.0 27.5 232 48-288 1-240 (325)
55 cd08244 MDR_enoyl_red Possible 100.0 5.7E-32 1.2E-36 240.1 28.5 234 48-288 1-238 (324)
56 cd05278 FDH_like Formaldehyde 100.0 2.4E-32 5.3E-37 245.0 26.4 229 48-288 1-264 (347)
57 cd05282 ETR_like 2-enoyl thioe 100.0 3.5E-32 7.6E-37 241.4 26.5 221 62-288 13-234 (323)
58 cd08279 Zn_ADH_class_III Class 100.0 4.6E-32 1E-36 245.1 27.2 230 48-288 1-279 (363)
59 cd08250 Mgc45594_like Mgc45594 100.0 6.9E-32 1.5E-36 240.4 27.7 232 47-288 1-234 (329)
60 cd08263 Zn_ADH10 Alcohol dehyd 100.0 4.2E-32 9.1E-37 245.7 26.6 230 48-288 1-284 (367)
61 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.2E-32 1.1E-36 243.5 27.0 231 48-288 1-271 (350)
62 TIGR02823 oxido_YhdH putative 100.0 6.4E-32 1.4E-36 240.0 27.2 230 49-288 1-238 (323)
63 cd08283 FDH_like_1 Glutathione 100.0 5.4E-32 1.2E-36 246.5 27.4 229 48-288 1-303 (386)
64 cd08243 quinone_oxidoreductase 100.0 7.2E-32 1.6E-36 238.7 27.2 230 48-288 1-235 (320)
65 cd05279 Zn_ADH1 Liver alcohol 100.0 5.9E-32 1.3E-36 244.6 26.8 230 48-288 1-282 (365)
66 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.1E-31 2.3E-36 241.5 27.4 230 48-288 1-271 (350)
67 cd08235 iditol_2_DH_like L-idi 100.0 1.2E-31 2.5E-36 240.4 27.3 228 48-288 1-262 (343)
68 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.5E-31 3.2E-36 240.0 28.0 229 48-288 1-261 (345)
69 cd08248 RTN4I1 Human Reticulon 100.0 7E-32 1.5E-36 242.4 25.0 233 48-288 1-254 (350)
70 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.7E-31 3.6E-36 238.9 27.2 227 48-288 1-255 (337)
71 cd08286 FDH_like_ADH2 formalde 100.0 2.3E-31 5.1E-36 238.7 27.5 230 48-288 1-263 (345)
72 KOG1198 Zinc-binding oxidoredu 100.0 4.9E-32 1.1E-36 240.6 22.5 231 48-286 5-250 (347)
73 cd08236 sugar_DH NAD(P)-depend 100.0 2.3E-31 4.9E-36 238.5 27.0 227 48-288 1-255 (343)
74 cd08249 enoyl_reductase_like e 100.0 5.2E-32 1.1E-36 242.5 22.6 230 48-288 1-251 (339)
75 cd08252 AL_MDR Arginate lyase 100.0 2.8E-31 6.2E-36 237.0 27.1 234 48-288 1-245 (336)
76 PRK10083 putative oxidoreducta 100.0 2.5E-31 5.4E-36 237.9 26.5 227 48-288 1-256 (339)
77 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.6E-31 7.8E-36 237.1 26.8 229 48-288 1-261 (341)
78 cd08284 FDH_like_2 Glutathione 100.0 3.6E-31 7.9E-36 237.2 26.9 227 48-288 1-263 (344)
79 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5E-31 1.1E-35 235.4 27.2 232 48-288 1-260 (338)
80 cd08276 MDR7 Medium chain dehy 100.0 7.2E-31 1.6E-35 233.9 28.2 234 48-288 1-256 (336)
81 PRK09422 ethanol-active dehydr 100.0 3.7E-31 7.9E-36 236.7 26.4 227 48-288 1-258 (338)
82 PRK13771 putative alcohol dehy 100.0 2.1E-31 4.6E-36 237.8 24.5 226 48-288 1-252 (334)
83 cd08259 Zn_ADH5 Alcohol dehydr 100.0 6.3E-31 1.4E-35 234.1 27.1 227 48-288 1-253 (332)
84 cd08253 zeta_crystallin Zeta-c 100.0 8.8E-31 1.9E-35 231.6 27.2 235 48-288 1-240 (325)
85 cd08264 Zn_ADH_like2 Alcohol d 100.0 5.2E-31 1.1E-35 234.4 25.4 224 48-288 1-250 (325)
86 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.2E-30 2.7E-35 230.5 27.1 232 48-288 1-261 (306)
87 cd08270 MDR4 Medium chain dehy 100.0 9.2E-31 2E-35 230.6 26.2 219 48-288 1-219 (305)
88 cd08288 MDR_yhdh Yhdh putative 100.0 1.4E-30 3.1E-35 231.3 27.4 230 48-287 1-238 (324)
89 cd08272 MDR6 Medium chain dehy 100.0 1.4E-30 3E-35 230.8 27.0 234 48-288 1-238 (326)
90 cd05276 p53_inducible_oxidored 100.0 1.5E-30 3.2E-35 229.8 27.0 234 48-288 1-235 (323)
91 cd08234 threonine_DH_like L-th 100.0 1.8E-30 3.8E-35 231.8 26.6 226 48-288 1-254 (334)
92 cd08273 MDR8 Medium chain dehy 100.0 1.9E-30 4.2E-35 231.1 26.5 229 49-288 2-230 (331)
93 PRK05396 tdh L-threonine 3-deh 100.0 1.8E-30 3.8E-35 232.7 26.3 229 48-288 1-260 (341)
94 cd08282 PFDH_like Pseudomonas 100.0 3.2E-30 6.9E-35 234.1 27.6 226 48-288 1-282 (375)
95 cd05285 sorbitol_DH Sorbitol d 100.0 1.9E-30 4.2E-35 232.7 25.7 226 51-288 2-262 (343)
96 cd08271 MDR5 Medium chain dehy 100.0 6.7E-30 1.4E-34 226.6 28.1 233 48-288 1-236 (325)
97 cd08266 Zn_ADH_like1 Alcohol d 100.0 5.9E-30 1.3E-34 228.2 27.6 235 48-288 1-262 (342)
98 cd05286 QOR2 Quinone oxidoredu 100.0 8.5E-30 1.8E-34 224.6 27.7 231 49-288 1-232 (320)
99 cd08242 MDR_like Medium chain 100.0 3.5E-30 7.6E-35 228.6 25.1 214 48-288 1-242 (319)
100 COG2130 Putative NADP-dependen 100.0 2.5E-30 5.3E-35 217.4 22.4 213 62-288 26-246 (340)
101 cd08268 MDR2 Medium chain dehy 100.0 8.8E-30 1.9E-34 225.6 27.2 235 48-288 1-240 (328)
102 cd08287 FDH_like_ADH3 formalde 100.0 6.2E-30 1.3E-34 229.4 26.4 229 48-288 1-265 (345)
103 cd08265 Zn_ADH3 Alcohol dehydr 100.0 8.7E-30 1.9E-34 231.9 27.0 219 63-288 39-304 (384)
104 cd05283 CAD1 Cinnamyl alcohol 100.0 7E-30 1.5E-34 228.5 25.8 225 49-288 1-260 (337)
105 cd08298 CAD2 Cinnamyl alcohol 100.0 8.6E-30 1.9E-34 227.0 26.3 224 48-288 1-253 (329)
106 cd08247 AST1_like AST1 is a cy 100.0 1.9E-29 4E-34 227.0 27.1 233 49-288 2-256 (352)
107 TIGR02824 quinone_pig3 putativ 100.0 2.5E-29 5.3E-34 222.5 27.5 234 48-288 1-235 (325)
108 cd05281 TDH Threonine dehydrog 100.0 1.9E-29 4.1E-34 226.1 26.4 229 48-288 1-259 (341)
109 cd08232 idonate-5-DH L-idonate 100.0 1.5E-29 3.3E-34 226.4 25.6 223 52-288 2-259 (339)
110 cd05288 PGDH Prostaglandin deh 100.0 3E-29 6.6E-34 223.3 26.6 229 48-288 2-241 (329)
111 cd08251 polyketide_synthase po 100.0 2.4E-29 5.3E-34 220.5 24.9 213 70-288 2-216 (303)
112 TIGR00692 tdh L-threonine 3-de 100.0 2.8E-29 6.2E-34 224.8 25.3 223 54-288 5-258 (340)
113 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.7E-29 5.8E-34 221.8 24.8 215 63-288 7-226 (312)
114 PLN02702 L-idonate 5-dehydroge 100.0 1E-28 2.2E-33 223.4 27.4 230 48-288 18-282 (364)
115 cd05289 MDR_like_2 alcohol deh 100.0 5E-29 1.1E-33 218.9 24.7 231 48-288 1-235 (309)
116 cd08245 CAD Cinnamyl alcohol d 100.0 1.1E-28 2.5E-33 219.8 26.3 225 49-288 1-253 (330)
117 cd05188 MDR Medium chain reduc 100.0 9.1E-29 2E-33 213.5 23.7 205 77-288 1-229 (271)
118 cd08241 QOR1 Quinone oxidoredu 100.0 3.5E-28 7.6E-33 214.7 26.8 233 48-288 1-235 (323)
119 cd08275 MDR3 Medium chain dehy 100.0 5.4E-28 1.2E-32 215.4 27.4 232 49-288 1-233 (337)
120 cd08267 MDR1 Medium chain dehy 100.0 2.7E-28 5.8E-33 215.7 24.4 227 54-288 4-237 (319)
121 TIGR03366 HpnZ_proposed putati 100.0 3.2E-28 6.9E-33 212.5 19.9 173 108-288 1-215 (280)
122 cd05195 enoyl_red enoyl reduct 100.0 1.2E-27 2.7E-32 207.8 23.5 203 76-288 1-206 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.1E-26 2.4E-31 201.7 22.2 198 80-288 2-202 (288)
124 KOG1196 Predicted NAD-dependen 99.9 6.3E-25 1.4E-29 184.3 23.7 206 71-288 33-250 (343)
125 KOG1202 Animal-type fatty acid 99.9 3.5E-24 7.7E-29 204.3 12.9 211 62-288 1428-1652(2376)
126 cd08255 2-desacetyl-2-hydroxye 99.9 1.5E-22 3.3E-27 176.0 18.5 166 104-288 19-187 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.7 9.7E-18 2.1E-22 125.5 9.2 83 75-157 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.4 4E-13 8.8E-18 103.4 8.7 84 200-288 1-86 (130)
129 PRK09424 pntA NAD(P) transhydr 99.0 6.4E-09 1.4E-13 96.8 12.5 98 186-288 162-282 (509)
130 cd00401 AdoHcyase S-adenosyl-L 98.6 2.4E-07 5.1E-12 84.4 10.1 96 176-288 188-286 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.3 5.1E-06 1.1E-10 77.5 11.4 97 187-288 162-281 (511)
132 PRK08306 dipicolinate synthase 98.2 5.6E-05 1.2E-09 66.5 13.5 87 188-288 151-238 (296)
133 PRK05476 S-adenosyl-L-homocyst 98.1 2.4E-05 5.2E-10 71.7 11.1 97 175-288 197-296 (425)
134 TIGR00936 ahcY adenosylhomocys 98.0 7.5E-05 1.6E-09 68.0 11.3 96 176-288 181-279 (406)
135 COG4221 Short-chain alcohol de 98.0 6.2E-05 1.4E-09 63.0 9.4 82 188-273 5-93 (246)
136 PLN02494 adenosylhomocysteinas 97.9 0.00011 2.4E-09 67.7 11.4 96 176-288 240-338 (477)
137 COG2518 Pcm Protein-L-isoaspar 97.8 9.8E-05 2.1E-09 60.7 7.5 115 165-288 51-166 (209)
138 PRK00517 prmA ribosomal protei 97.8 0.00029 6.3E-09 60.4 10.9 134 127-288 67-210 (250)
139 PF11017 DUF2855: Protein of u 97.8 0.00099 2.1E-08 58.4 13.7 149 106-274 31-212 (314)
140 PRK05786 fabG 3-ketoacyl-(acyl 97.7 0.00026 5.6E-09 59.8 10.0 80 188-271 4-91 (238)
141 PRK11873 arsM arsenite S-adeno 97.7 8.9E-05 1.9E-09 64.4 6.9 95 184-288 73-180 (272)
142 PRK08324 short chain dehydroge 97.7 0.00013 2.7E-09 71.7 8.7 115 141-270 385-507 (681)
143 PRK12771 putative glutamate sy 97.7 0.00012 2.5E-09 70.4 7.9 96 185-285 133-247 (564)
144 COG0300 DltE Short-chain dehyd 97.7 0.00048 1E-08 59.1 10.5 82 186-271 3-94 (265)
145 PRK07060 short chain dehydroge 97.6 0.00047 1E-08 58.4 10.0 79 188-271 8-87 (245)
146 PRK12742 oxidoreductase; Provi 97.6 0.00052 1.1E-08 57.8 10.1 80 188-271 5-85 (237)
147 TIGR02853 spore_dpaA dipicolin 97.6 0.0015 3.2E-08 57.2 12.5 86 188-287 150-236 (287)
148 TIGR00518 alaDH alanine dehydr 97.6 0.00086 1.9E-08 60.9 11.2 91 188-288 166-264 (370)
149 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.00049 1.1E-08 61.0 9.2 109 152-274 139-251 (311)
150 PTZ00075 Adenosylhomocysteinas 97.5 0.0017 3.7E-08 60.2 12.3 94 178-288 242-338 (476)
151 COG3967 DltE Short-chain dehyd 97.5 0.00088 1.9E-08 54.7 9.1 80 188-271 4-88 (245)
152 PRK05693 short chain dehydroge 97.5 0.0011 2.3E-08 57.4 10.4 78 190-271 2-82 (274)
153 PRK05993 short chain dehydroge 97.5 0.0012 2.6E-08 57.4 10.6 78 188-271 3-86 (277)
154 PRK06182 short chain dehydroge 97.5 0.00085 1.8E-08 58.1 9.6 80 188-271 2-84 (273)
155 PRK06139 short chain dehydroge 97.5 0.00064 1.4E-08 60.8 8.9 80 188-271 6-94 (330)
156 PF13460 NAD_binding_10: NADH( 97.4 0.0011 2.3E-08 53.7 9.2 70 192-271 1-70 (183)
157 PRK12828 short chain dehydroge 97.4 0.00098 2.1E-08 56.1 8.3 84 188-271 6-92 (239)
158 KOG1201 Hydroxysteroid 17-beta 97.3 0.0022 4.8E-08 55.4 10.1 85 187-271 36-124 (300)
159 PRK05866 short chain dehydroge 97.3 0.0014 3.1E-08 57.5 9.1 80 188-271 39-127 (293)
160 PLN03209 translocon at the inn 97.3 0.0023 5E-08 60.7 10.8 84 182-272 73-170 (576)
161 PRK09291 short chain dehydroge 97.3 0.0016 3.5E-08 55.6 8.9 77 189-271 2-83 (257)
162 PRK00377 cbiT cobalt-precorrin 97.3 0.0035 7.6E-08 51.7 10.4 97 183-288 35-142 (198)
163 PRK05872 short chain dehydroge 97.3 0.0015 3.3E-08 57.4 8.6 80 188-271 8-95 (296)
164 PF01488 Shikimate_DH: Shikima 97.2 0.0015 3.2E-08 50.5 7.4 73 188-273 11-87 (135)
165 PRK06949 short chain dehydroge 97.2 0.0025 5.4E-08 54.4 9.7 81 187-271 7-96 (258)
166 PRK06057 short chain dehydroge 97.2 0.0022 4.7E-08 54.8 9.3 80 188-271 6-89 (255)
167 KOG1205 Predicted dehydrogenas 97.2 0.0017 3.8E-08 56.1 8.4 83 188-271 11-101 (282)
168 TIGR03325 BphB_TodD cis-2,3-di 97.2 0.0024 5.1E-08 54.9 9.3 80 188-271 4-89 (262)
169 PRK06128 oxidoreductase; Provi 97.2 0.0036 7.9E-08 55.0 10.6 84 188-271 54-144 (300)
170 PRK07478 short chain dehydroge 97.2 0.002 4.3E-08 55.0 8.7 80 188-271 5-93 (254)
171 PRK08217 fabG 3-ketoacyl-(acyl 97.2 0.0019 4E-08 54.9 8.5 80 188-271 4-92 (253)
172 PRK07806 short chain dehydroge 97.2 0.0056 1.2E-07 51.9 11.4 35 188-222 5-39 (248)
173 PRK06125 short chain dehydroge 97.2 0.0023 4.9E-08 54.9 9.0 80 188-271 6-91 (259)
174 PRK12367 short chain dehydroge 97.2 0.0031 6.6E-08 53.9 9.6 77 188-271 13-89 (245)
175 PRK06505 enoyl-(acyl carrier p 97.2 0.0025 5.4E-08 55.3 9.2 83 188-271 6-95 (271)
176 PRK07831 short chain dehydroge 97.2 0.0028 6.1E-08 54.4 9.4 82 186-271 14-107 (262)
177 PRK13394 3-hydroxybutyrate deh 97.2 0.0027 5.8E-08 54.3 8.9 84 188-271 6-94 (262)
178 PRK05876 short chain dehydroge 97.1 0.0024 5.2E-08 55.5 8.6 80 188-271 5-93 (275)
179 PRK07109 short chain dehydroge 97.1 0.0022 4.9E-08 57.4 8.7 80 188-271 7-95 (334)
180 PRK06200 2,3-dihydroxy-2,3-dih 97.1 0.0028 6E-08 54.5 8.9 80 188-271 5-90 (263)
181 PRK05867 short chain dehydroge 97.1 0.0025 5.4E-08 54.4 8.5 80 188-271 8-96 (253)
182 PRK08339 short chain dehydroge 97.1 0.0021 4.5E-08 55.4 7.9 80 188-271 7-95 (263)
183 PRK12481 2-deoxy-D-gluconate 3 97.1 0.0035 7.7E-08 53.5 9.2 82 188-271 7-93 (251)
184 PRK06172 short chain dehydroge 97.1 0.0029 6.2E-08 54.0 8.6 80 188-271 6-94 (253)
185 PF13602 ADH_zinc_N_2: Zinc-bi 97.1 0.00012 2.5E-09 55.7 -0.0 45 236-288 1-48 (127)
186 PRK07533 enoyl-(acyl carrier p 97.1 0.0034 7.4E-08 53.9 9.1 83 188-271 9-98 (258)
187 PRK08017 oxidoreductase; Provi 97.1 0.0055 1.2E-07 52.2 10.3 76 190-271 3-84 (256)
188 PRK11705 cyclopropane fatty ac 97.1 0.0033 7.1E-08 57.4 9.3 104 173-288 152-264 (383)
189 PRK06196 oxidoreductase; Provi 97.1 0.0045 9.7E-08 54.8 10.0 80 188-271 25-109 (315)
190 PRK06194 hypothetical protein; 97.1 0.0038 8.3E-08 54.3 9.5 80 188-271 5-93 (287)
191 PRK00045 hemA glutamyl-tRNA re 97.1 0.0063 1.4E-07 56.4 11.2 144 107-273 90-254 (423)
192 PRK06463 fabG 3-ketoacyl-(acyl 97.1 0.0039 8.5E-08 53.3 9.3 81 188-271 6-89 (255)
193 PRK12939 short chain dehydroge 97.1 0.0032 6.9E-08 53.4 8.7 80 188-271 6-94 (250)
194 PRK05854 short chain dehydroge 97.1 0.002 4.3E-08 57.1 7.5 34 188-221 13-46 (313)
195 cd01078 NAD_bind_H4MPT_DH NADP 97.1 0.0078 1.7E-07 49.4 10.5 79 187-273 26-109 (194)
196 PRK07062 short chain dehydroge 97.1 0.0043 9.3E-08 53.3 9.3 80 188-271 7-97 (265)
197 TIGR01832 kduD 2-deoxy-D-gluco 97.1 0.0047 1E-07 52.4 9.5 82 188-271 4-90 (248)
198 PRK08415 enoyl-(acyl carrier p 97.1 0.0043 9.4E-08 53.9 9.4 83 188-271 4-93 (274)
199 PRK06483 dihydromonapterin red 97.0 0.0052 1.1E-07 51.8 9.5 80 189-271 2-84 (236)
200 PRK12829 short chain dehydroge 97.0 0.0042 9E-08 53.2 9.0 83 186-272 8-97 (264)
201 PRK08340 glucose-1-dehydrogena 97.0 0.0029 6.3E-08 54.3 7.9 77 191-271 2-86 (259)
202 PRK08589 short chain dehydroge 97.0 0.0042 9.1E-08 53.8 8.8 83 188-271 5-92 (272)
203 PRK06180 short chain dehydroge 97.0 0.0043 9.3E-08 53.8 8.9 80 188-271 3-88 (277)
204 PRK07825 short chain dehydroge 97.0 0.0049 1.1E-07 53.2 9.3 79 189-271 5-88 (273)
205 PRK07814 short chain dehydroge 97.0 0.0051 1.1E-07 52.9 9.3 80 188-271 9-97 (263)
206 PRK08264 short chain dehydroge 97.0 0.0063 1.4E-07 51.3 9.6 77 188-271 5-83 (238)
207 PRK08177 short chain dehydroge 97.0 0.0048 1E-07 51.7 8.8 77 190-271 2-81 (225)
208 PRK06181 short chain dehydroge 97.0 0.0044 9.6E-08 53.1 8.7 79 189-271 1-88 (263)
209 PRK06841 short chain dehydroge 97.0 0.0059 1.3E-07 52.0 9.5 80 188-271 14-99 (255)
210 PRK13943 protein-L-isoaspartat 97.0 0.0077 1.7E-07 53.5 10.3 97 182-288 74-177 (322)
211 PRK07677 short chain dehydroge 97.0 0.0053 1.1E-07 52.4 9.0 79 189-271 1-88 (252)
212 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.011 2.4E-07 55.1 11.8 82 188-271 209-294 (450)
213 PRK08993 2-deoxy-D-gluconate 3 96.9 0.0075 1.6E-07 51.5 9.8 82 188-271 9-95 (253)
214 PRK07890 short chain dehydroge 96.9 0.0044 9.5E-08 52.9 8.3 80 188-271 4-92 (258)
215 PRK08159 enoyl-(acyl carrier p 96.9 0.0062 1.3E-07 52.8 9.3 84 187-271 8-98 (272)
216 PRK07904 short chain dehydroge 96.9 0.0078 1.7E-07 51.6 9.8 85 186-271 5-97 (253)
217 PF05368 NmrA: NmrA-like famil 96.9 0.0078 1.7E-07 50.7 9.7 74 192-271 1-74 (233)
218 PRK07523 gluconate 5-dehydroge 96.9 0.005 1.1E-07 52.6 8.5 80 188-271 9-97 (255)
219 PF02353 CMAS: Mycolic acid cy 96.9 0.0028 6.1E-08 55.0 7.0 98 177-288 51-163 (273)
220 PRK07576 short chain dehydroge 96.9 0.0052 1.1E-07 52.9 8.7 80 188-271 8-96 (264)
221 PRK06603 enoyl-(acyl carrier p 96.9 0.0059 1.3E-07 52.5 9.0 83 188-271 7-96 (260)
222 PRK06500 short chain dehydroge 96.9 0.0077 1.7E-07 51.0 9.6 80 188-271 5-90 (249)
223 PRK06914 short chain dehydroge 96.9 0.0049 1.1E-07 53.4 8.5 79 189-271 3-91 (280)
224 PRK07063 short chain dehydroge 96.9 0.0039 8.5E-08 53.4 7.8 34 188-221 6-39 (260)
225 COG2230 Cfa Cyclopropane fatty 96.9 0.0085 1.8E-07 51.8 9.6 103 173-288 57-173 (283)
226 PRK06935 2-deoxy-D-gluconate 3 96.9 0.0076 1.6E-07 51.6 9.5 83 188-271 14-101 (258)
227 PRK08690 enoyl-(acyl carrier p 96.9 0.006 1.3E-07 52.5 8.9 83 188-271 5-94 (261)
228 PRK08267 short chain dehydroge 96.9 0.0082 1.8E-07 51.4 9.7 78 190-271 2-87 (260)
229 PRK08643 acetoin reductase; Va 96.9 0.0057 1.2E-07 52.2 8.6 79 189-271 2-89 (256)
230 PRK07774 short chain dehydroge 96.9 0.0056 1.2E-07 51.9 8.6 34 188-221 5-38 (250)
231 PRK09072 short chain dehydroge 96.9 0.0059 1.3E-07 52.4 8.7 80 188-271 4-90 (263)
232 PRK07326 short chain dehydroge 96.9 0.0064 1.4E-07 51.2 8.8 80 188-271 5-92 (237)
233 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0029 6.3E-08 51.3 6.4 85 187-288 34-124 (178)
234 PRK07791 short chain dehydroge 96.9 0.0081 1.8E-07 52.5 9.6 35 187-221 4-38 (286)
235 PRK08703 short chain dehydroge 96.9 0.0045 9.7E-08 52.3 7.8 35 188-222 5-39 (239)
236 PRK06197 short chain dehydroge 96.9 0.0042 9.1E-08 54.7 7.8 34 188-221 15-48 (306)
237 PRK08085 gluconate 5-dehydroge 96.9 0.0067 1.5E-07 51.7 8.9 80 188-271 8-96 (254)
238 PRK06079 enoyl-(acyl carrier p 96.9 0.0062 1.3E-07 52.1 8.6 80 188-271 6-93 (252)
239 PRK07454 short chain dehydroge 96.9 0.0072 1.6E-07 51.1 9.0 81 187-271 4-93 (241)
240 PRK06138 short chain dehydroge 96.9 0.0048 1E-07 52.4 7.9 80 188-271 4-91 (252)
241 PRK08862 short chain dehydroge 96.9 0.0058 1.3E-07 51.5 8.3 79 188-270 4-92 (227)
242 PRK08628 short chain dehydroge 96.9 0.008 1.7E-07 51.4 9.3 80 188-271 6-93 (258)
243 PRK08277 D-mannonate oxidoredu 96.8 0.007 1.5E-07 52.4 8.9 80 188-271 9-97 (278)
244 PRK06179 short chain dehydroge 96.8 0.0047 1E-07 53.2 7.8 78 188-271 3-83 (270)
245 TIGR02622 CDP_4_6_dhtase CDP-g 96.8 0.012 2.7E-07 52.8 10.8 82 188-271 3-85 (349)
246 PRK06114 short chain dehydroge 96.8 0.011 2.4E-07 50.4 10.0 84 188-271 7-96 (254)
247 PRK07832 short chain dehydroge 96.8 0.0067 1.5E-07 52.4 8.7 78 190-271 1-88 (272)
248 PRK08213 gluconate 5-dehydroge 96.8 0.007 1.5E-07 51.8 8.7 80 188-271 11-99 (259)
249 PRK07231 fabG 3-ketoacyl-(acyl 96.8 0.0059 1.3E-07 51.8 8.2 80 188-271 4-91 (251)
250 PRK08265 short chain dehydroge 96.8 0.0091 2E-07 51.3 9.4 80 188-271 5-90 (261)
251 PRK07035 short chain dehydroge 96.8 0.0075 1.6E-07 51.3 8.7 80 188-271 7-95 (252)
252 PLN02253 xanthoxin dehydrogena 96.8 0.0066 1.4E-07 52.6 8.4 80 188-271 17-104 (280)
253 PRK07666 fabG 3-ketoacyl-(acyl 96.8 0.0078 1.7E-07 50.8 8.7 80 188-271 6-94 (239)
254 PRK08303 short chain dehydroge 96.8 0.01 2.3E-07 52.4 9.7 35 188-222 7-41 (305)
255 PLN02780 ketoreductase/ oxidor 96.8 0.0068 1.5E-07 53.9 8.6 79 188-271 52-142 (320)
256 PRK05717 oxidoreductase; Valid 96.8 0.012 2.7E-07 50.1 9.9 80 188-271 9-94 (255)
257 PRK06720 hypothetical protein; 96.8 0.01 2.2E-07 47.7 8.8 80 188-271 15-103 (169)
258 PF12847 Methyltransf_18: Meth 96.8 0.0025 5.5E-08 47.0 4.8 91 188-288 1-108 (112)
259 PLN02657 3,8-divinyl protochlo 96.8 0.011 2.5E-07 54.0 10.0 88 184-271 55-146 (390)
260 PRK12938 acetyacetyl-CoA reduc 96.8 0.0078 1.7E-07 51.0 8.4 82 188-271 2-91 (246)
261 PRK07984 enoyl-(acyl carrier p 96.8 0.013 2.7E-07 50.6 9.8 83 188-271 5-94 (262)
262 PRK12826 3-ketoacyl-(acyl-carr 96.8 0.0077 1.7E-07 51.0 8.3 84 188-271 5-93 (251)
263 PRK07024 short chain dehydroge 96.7 0.0061 1.3E-07 52.2 7.7 79 189-271 2-88 (257)
264 PRK05653 fabG 3-ketoacyl-(acyl 96.7 0.011 2.4E-07 49.8 9.1 80 188-271 4-92 (246)
265 TIGR00406 prmA ribosomal prote 96.7 0.0085 1.8E-07 52.5 8.6 140 126-288 105-256 (288)
266 COG1748 LYS9 Saccharopine dehy 96.7 0.013 2.8E-07 53.1 9.8 87 190-284 2-92 (389)
267 PRK06198 short chain dehydroge 96.7 0.0083 1.8E-07 51.3 8.3 80 188-271 5-94 (260)
268 KOG1200 Mitochondrial/plastidi 96.7 0.014 3E-07 47.4 8.8 79 190-271 15-100 (256)
269 TIGR03206 benzo_BadH 2-hydroxy 96.7 0.0089 1.9E-07 50.7 8.4 80 188-271 2-90 (250)
270 PRK07424 bifunctional sterol d 96.7 0.017 3.8E-07 53.0 10.6 77 188-271 177-255 (406)
271 TIGR01035 hemA glutamyl-tRNA r 96.7 0.025 5.5E-07 52.2 11.8 143 107-273 88-252 (417)
272 PF02670 DXP_reductoisom: 1-de 96.7 0.028 6.1E-07 42.9 10.0 90 192-284 1-114 (129)
273 PRK06997 enoyl-(acyl carrier p 96.7 0.011 2.3E-07 50.9 8.9 83 188-271 5-94 (260)
274 PRK12429 3-hydroxybutyrate deh 96.7 0.012 2.6E-07 50.1 9.1 80 188-271 3-91 (258)
275 PRK08063 enoyl-(acyl carrier p 96.7 0.0079 1.7E-07 51.0 7.9 81 188-271 3-92 (250)
276 KOG0725 Reductases with broad 96.7 0.012 2.5E-07 51.1 9.0 83 187-273 6-101 (270)
277 PRK07792 fabG 3-ketoacyl-(acyl 96.7 0.011 2.4E-07 52.1 9.1 83 188-271 11-99 (306)
278 PRK07856 short chain dehydroge 96.7 0.012 2.6E-07 50.2 8.9 34 188-221 5-38 (252)
279 PRK06482 short chain dehydroge 96.7 0.017 3.7E-07 49.9 10.0 78 190-271 3-86 (276)
280 PRK13942 protein-L-isoaspartat 96.7 0.0091 2E-07 49.8 7.9 95 182-288 70-173 (212)
281 PRK08219 short chain dehydroge 96.7 0.02 4.4E-07 47.6 10.1 78 189-271 3-81 (227)
282 PRK08263 short chain dehydroge 96.7 0.017 3.6E-07 50.0 9.8 79 189-271 3-87 (275)
283 PRK09186 flagellin modificatio 96.6 0.0081 1.8E-07 51.2 7.7 34 188-221 3-36 (256)
284 PRK06398 aldose dehydrogenase; 96.6 0.0029 6.2E-08 54.4 4.9 34 188-221 5-38 (258)
285 PRK08594 enoyl-(acyl carrier p 96.6 0.015 3.3E-07 49.9 9.4 83 188-271 6-97 (257)
286 PRK07097 gluconate 5-dehydroge 96.6 0.014 3.1E-07 50.1 9.2 80 188-271 9-97 (265)
287 PRK07453 protochlorophyllide o 96.6 0.016 3.6E-07 51.4 9.9 40 188-231 5-44 (322)
288 PRK06113 7-alpha-hydroxysteroi 96.6 0.013 2.7E-07 50.1 8.8 80 188-271 10-98 (255)
289 PRK08945 putative oxoacyl-(acy 96.6 0.0065 1.4E-07 51.6 7.0 36 186-221 9-44 (247)
290 PRK12823 benD 1,6-dihydroxycyc 96.6 0.0092 2E-07 51.0 7.9 83 188-271 7-94 (260)
291 PRK09242 tropinone reductase; 96.6 0.011 2.4E-07 50.5 8.4 34 188-221 8-41 (257)
292 KOG1014 17 beta-hydroxysteroid 96.6 0.021 4.6E-07 49.7 9.9 81 187-273 47-138 (312)
293 CHL00194 ycf39 Ycf39; Provisio 96.6 0.021 4.5E-07 50.6 10.3 73 191-271 2-74 (317)
294 PRK06124 gluconate 5-dehydroge 96.6 0.015 3.1E-07 49.7 8.9 80 188-271 10-98 (256)
295 COG2242 CobL Precorrin-6B meth 96.6 0.023 5E-07 45.9 9.3 95 184-288 30-132 (187)
296 PRK13656 trans-2-enoyl-CoA red 96.6 0.032 6.9E-07 50.5 11.2 85 187-272 39-142 (398)
297 PRK08416 7-alpha-hydroxysteroi 96.6 0.014 3.1E-07 50.0 8.8 80 188-270 7-96 (260)
298 PRK13944 protein-L-isoaspartat 96.5 0.01 2.2E-07 49.2 7.5 95 182-288 66-170 (205)
299 KOG1502 Flavonol reductase/cin 96.5 0.021 4.5E-07 50.4 9.5 80 188-271 5-88 (327)
300 PLN02989 cinnamyl-alcohol dehy 96.5 0.024 5.2E-07 50.3 10.2 82 187-271 3-87 (325)
301 PRK12384 sorbitol-6-phosphate 96.5 0.018 4E-07 49.1 9.1 33 189-221 2-34 (259)
302 PRK12743 oxidoreductase; Provi 96.5 0.015 3.3E-07 49.6 8.6 80 189-271 2-90 (256)
303 PRK08226 short chain dehydroge 96.5 0.023 4.9E-07 48.7 9.7 80 188-271 5-92 (263)
304 PRK03369 murD UDP-N-acetylmura 96.5 0.014 3E-07 55.1 8.8 75 186-274 9-83 (488)
305 PF01135 PCMT: Protein-L-isoas 96.5 0.0023 5.1E-08 53.2 3.2 98 180-288 64-169 (209)
306 PRK06953 short chain dehydroge 96.5 0.029 6.4E-07 46.8 10.0 77 190-271 2-80 (222)
307 PF00670 AdoHcyase_NAD: S-aden 96.5 0.066 1.4E-06 42.4 11.2 93 176-285 9-104 (162)
308 PRK05650 short chain dehydroge 96.5 0.019 4.2E-07 49.4 9.0 78 190-271 1-87 (270)
309 PRK06484 short chain dehydroge 96.5 0.018 3.9E-07 54.7 9.6 80 188-271 4-89 (520)
310 PRK07775 short chain dehydroge 96.5 0.019 4.2E-07 49.6 9.0 80 188-271 9-97 (274)
311 PRK08251 short chain dehydroge 96.5 0.012 2.6E-07 49.9 7.5 79 189-271 2-91 (248)
312 PRK08936 glucose-1-dehydrogena 96.5 0.018 3.9E-07 49.3 8.7 81 188-271 6-95 (261)
313 PRK12936 3-ketoacyl-(acyl-carr 96.5 0.029 6.4E-07 47.3 9.9 80 188-271 5-90 (245)
314 PRK07067 sorbitol dehydrogenas 96.5 0.019 4.2E-07 49.0 8.8 80 188-271 5-90 (257)
315 TIGR02469 CbiT precorrin-6Y C5 96.5 0.02 4.3E-07 42.8 7.9 95 183-288 14-119 (124)
316 PRK05875 short chain dehydroge 96.4 0.023 4.9E-07 49.1 9.2 34 188-221 6-39 (276)
317 PRK06523 short chain dehydroge 96.4 0.0059 1.3E-07 52.2 5.3 34 188-221 8-41 (260)
318 PRK08278 short chain dehydroge 96.4 0.028 6.1E-07 48.6 9.4 35 188-222 5-39 (273)
319 PF00106 adh_short: short chai 96.4 0.017 3.7E-07 45.7 7.5 79 190-271 1-90 (167)
320 PRK05447 1-deoxy-D-xylulose 5- 96.3 0.047 1E-06 49.4 10.8 94 190-286 2-117 (385)
321 PRK09135 pteridine reductase; 96.3 0.035 7.6E-07 46.9 9.7 34 188-221 5-38 (249)
322 PRK06701 short chain dehydroge 96.3 0.029 6.4E-07 49.1 9.4 85 187-271 44-134 (290)
323 PRK09134 short chain dehydroge 96.3 0.028 6E-07 48.1 9.1 34 188-221 8-41 (258)
324 PRK07074 short chain dehydroge 96.3 0.032 6.9E-07 47.6 9.4 79 189-271 2-87 (257)
325 PRK06484 short chain dehydroge 96.3 0.02 4.2E-07 54.4 8.8 81 187-271 267-353 (520)
326 PLN02896 cinnamyl-alcohol dehy 96.3 0.028 6.1E-07 50.5 9.4 79 186-271 7-89 (353)
327 KOG1209 1-Acyl dihydroxyaceton 96.3 0.018 3.9E-07 47.5 7.1 80 188-273 6-93 (289)
328 PRK06171 sorbitol-6-phosphate 96.3 0.0054 1.2E-07 52.7 4.5 34 188-221 8-41 (266)
329 PRK12937 short chain dehydroge 96.3 0.031 6.7E-07 47.1 9.1 81 188-271 4-93 (245)
330 PRK07370 enoyl-(acyl carrier p 96.3 0.028 6.1E-07 48.2 8.9 84 188-271 5-97 (258)
331 PRK05557 fabG 3-ketoacyl-(acyl 96.3 0.04 8.6E-07 46.4 9.6 35 188-222 4-38 (248)
332 PLN02986 cinnamyl-alcohol dehy 96.3 0.038 8.3E-07 48.9 9.9 80 188-271 4-87 (322)
333 TIGR00080 pimt protein-L-isoas 96.2 0.025 5.5E-07 47.2 8.2 97 182-288 71-174 (215)
334 KOG1210 Predicted 3-ketosphing 96.2 0.039 8.5E-07 48.1 9.3 85 184-272 28-123 (331)
335 PRK05884 short chain dehydroge 96.2 0.034 7.3E-07 46.6 9.0 74 191-270 2-78 (223)
336 PRK07889 enoyl-(acyl carrier p 96.2 0.035 7.6E-07 47.6 9.2 82 188-271 6-95 (256)
337 PRK07985 oxidoreductase; Provi 96.2 0.035 7.5E-07 48.7 9.3 82 188-271 48-138 (294)
338 PRK12744 short chain dehydroge 96.2 0.044 9.6E-07 46.8 9.8 84 188-271 7-99 (257)
339 cd01080 NAD_bind_m-THF_DH_Cycl 96.2 0.061 1.3E-06 43.1 9.8 54 167-221 22-76 (168)
340 PF03435 Saccharop_dh: Sacchar 96.2 0.041 8.8E-07 50.3 10.0 88 192-287 1-94 (386)
341 KOG1208 Dehydrogenases with di 96.2 0.022 4.8E-07 50.5 7.8 85 187-271 33-124 (314)
342 TIGR02415 23BDH acetoin reduct 96.2 0.031 6.7E-07 47.5 8.6 78 190-271 1-87 (254)
343 PRK12809 putative oxidoreducta 96.2 0.014 3E-07 57.1 7.1 81 188-272 309-406 (639)
344 PF01262 AlaDh_PNT_C: Alanine 96.2 0.029 6.4E-07 45.0 7.9 90 190-287 21-135 (168)
345 TIGR01318 gltD_gamma_fam gluta 96.2 0.022 4.7E-07 53.5 8.1 83 187-273 139-238 (467)
346 PRK07102 short chain dehydroge 96.2 0.027 5.9E-07 47.6 8.1 32 190-221 2-33 (243)
347 TIGR01289 LPOR light-dependent 96.2 0.046 9.9E-07 48.4 9.8 79 189-271 3-91 (314)
348 PRK06947 glucose-1-dehydrogena 96.2 0.029 6.3E-07 47.5 8.3 79 190-271 3-90 (248)
349 PRK05855 short chain dehydroge 96.2 0.024 5.3E-07 54.2 8.7 80 188-271 314-402 (582)
350 PRK12825 fabG 3-ketoacyl-(acyl 96.2 0.033 7.1E-07 46.9 8.6 35 188-222 5-39 (249)
351 PRK13940 glutamyl-tRNA reducta 96.1 0.088 1.9E-06 48.6 11.8 78 184-274 176-255 (414)
352 PRK06101 short chain dehydroge 96.1 0.054 1.2E-06 45.8 9.9 78 190-271 2-81 (240)
353 PRK08261 fabG 3-ketoacyl-(acyl 96.1 0.0099 2.1E-07 55.4 5.7 59 183-245 28-91 (450)
354 PRK05599 hypothetical protein; 96.1 0.034 7.4E-07 47.3 8.6 76 191-271 2-87 (246)
355 TIGR01829 AcAcCoA_reduct aceto 96.1 0.034 7.3E-07 46.8 8.5 32 190-221 1-32 (242)
356 TIGR01963 PHB_DH 3-hydroxybuty 96.1 0.039 8.4E-07 46.8 8.9 33 189-221 1-33 (255)
357 PRK10538 malonic semialdehyde 96.1 0.068 1.5E-06 45.4 10.4 77 191-271 2-84 (248)
358 TIGR02356 adenyl_thiF thiazole 96.1 0.048 1E-06 45.1 9.1 34 189-223 21-54 (202)
359 PRK12935 acetoacetyl-CoA reduc 96.1 0.043 9.3E-07 46.4 9.0 81 188-271 5-94 (247)
360 PRK12747 short chain dehydroge 96.1 0.062 1.3E-06 45.7 9.9 33 188-220 3-35 (252)
361 PRK12746 short chain dehydroge 96.1 0.044 9.5E-07 46.6 9.0 33 188-220 5-37 (254)
362 PRK08642 fabG 3-ketoacyl-(acyl 96.1 0.068 1.5E-06 45.3 10.1 34 188-221 4-37 (253)
363 PRK07041 short chain dehydroge 96.1 0.052 1.1E-06 45.4 9.2 75 193-271 1-79 (230)
364 PLN00141 Tic62-NAD(P)-related 96.1 0.058 1.3E-06 46.0 9.7 77 188-271 16-95 (251)
365 PLN02240 UDP-glucose 4-epimera 96.1 0.063 1.4E-06 48.1 10.3 82 189-271 5-91 (352)
366 PLN02686 cinnamoyl-CoA reducta 96.0 0.052 1.1E-06 49.2 9.8 36 186-221 50-85 (367)
367 PRK07201 short chain dehydroge 96.0 0.028 6E-07 55.0 8.5 79 189-271 371-458 (657)
368 PRK06940 short chain dehydroge 96.0 0.037 8E-07 48.0 8.4 77 189-271 2-86 (275)
369 PRK12827 short chain dehydroge 96.0 0.073 1.6E-06 44.9 10.1 84 188-271 5-97 (249)
370 PLN02427 UDP-apiose/xylose syn 96.0 0.052 1.1E-06 49.5 9.7 80 184-270 9-95 (386)
371 PRK05565 fabG 3-ketoacyl-(acyl 96.0 0.036 7.8E-07 46.7 8.1 33 189-221 5-38 (247)
372 PRK12824 acetoacetyl-CoA reduc 96.0 0.064 1.4E-06 45.2 9.6 33 190-222 3-35 (245)
373 TIGR02685 pter_reduc_Leis pter 96.0 0.05 1.1E-06 46.8 9.0 32 190-221 2-33 (267)
374 PRK06718 precorrin-2 dehydroge 96.0 0.05 1.1E-06 45.1 8.6 81 188-280 9-89 (202)
375 PRK06123 short chain dehydroge 96.0 0.038 8.2E-07 46.8 8.1 80 189-271 2-90 (248)
376 PRK12548 shikimate 5-dehydroge 95.9 0.07 1.5E-06 46.8 9.8 34 187-221 124-158 (289)
377 PLN02730 enoyl-[acyl-carrier-p 95.9 0.056 1.2E-06 47.7 9.1 31 188-218 8-40 (303)
378 PRK12745 3-ketoacyl-(acyl-carr 95.9 0.054 1.2E-06 46.0 8.9 82 190-271 3-90 (256)
379 PRK06077 fabG 3-ketoacyl-(acyl 95.9 0.049 1.1E-06 46.1 8.5 81 189-271 6-94 (252)
380 COG2910 Putative NADH-flavin r 95.9 0.039 8.4E-07 44.5 7.1 72 191-272 2-73 (211)
381 PRK08220 2,3-dihydroxybenzoate 95.9 0.064 1.4E-06 45.5 9.2 34 188-221 7-40 (252)
382 TIGR03589 PseB UDP-N-acetylglu 95.9 0.077 1.7E-06 47.2 10.0 77 188-271 3-84 (324)
383 PRK04148 hypothetical protein; 95.9 0.11 2.3E-06 39.9 9.3 94 186-286 14-127 (134)
384 PRK15181 Vi polysaccharide bio 95.9 0.099 2.2E-06 47.0 10.7 47 175-222 2-48 (348)
385 PLN02662 cinnamyl-alcohol dehy 95.9 0.069 1.5E-06 47.2 9.6 35 188-222 3-37 (322)
386 TIGR01179 galE UDP-glucose-4-e 95.8 0.057 1.2E-06 47.5 9.0 80 191-271 1-80 (328)
387 PLN02214 cinnamoyl-CoA reducta 95.8 0.078 1.7E-06 47.6 9.9 36 187-222 8-43 (342)
388 PLN00198 anthocyanidin reducta 95.8 0.069 1.5E-06 47.7 9.5 80 187-270 7-89 (338)
389 KOG1199 Short-chain alcohol de 95.8 0.057 1.2E-06 43.0 7.7 84 187-273 7-95 (260)
390 PRK12475 thiamine/molybdopteri 95.8 0.059 1.3E-06 48.4 8.9 82 189-274 24-129 (338)
391 PRK14175 bifunctional 5,10-met 95.8 0.12 2.6E-06 45.0 10.5 54 168-221 137-190 (286)
392 PLN02650 dihydroflavonol-4-red 95.8 0.074 1.6E-06 47.8 9.7 35 188-222 4-38 (351)
393 PRK08644 thiamine biosynthesis 95.8 0.062 1.3E-06 44.9 8.5 33 190-223 29-61 (212)
394 COG2227 UbiG 2-polyprenyl-3-me 95.8 0.068 1.5E-06 45.0 8.4 92 187-288 58-158 (243)
395 COG1179 Dinucleotide-utilizing 95.8 0.073 1.6E-06 44.8 8.5 83 189-274 30-134 (263)
396 PRK09730 putative NAD(P)-bindi 95.8 0.06 1.3E-06 45.4 8.4 79 190-271 2-89 (247)
397 PLN02653 GDP-mannose 4,6-dehyd 95.7 0.048 1E-06 48.7 8.1 35 188-222 5-39 (340)
398 PRK07688 thiamine/molybdopteri 95.7 0.069 1.5E-06 47.9 8.8 81 190-274 25-129 (339)
399 TIGR00438 rrmJ cell division p 95.7 0.063 1.4E-06 43.8 8.0 96 182-288 26-143 (188)
400 KOG2017 Molybdopterin synthase 95.7 0.031 6.6E-07 49.2 6.2 82 189-274 66-169 (427)
401 PF02254 TrkA_N: TrkA-N domain 95.7 0.25 5.5E-06 36.5 10.7 75 192-274 1-75 (116)
402 TIGR00715 precor6x_red precorr 95.6 0.032 7E-07 47.9 6.2 74 191-271 2-75 (256)
403 TIGR01470 cysG_Nterm siroheme 95.6 0.1 2.2E-06 43.3 9.0 86 188-285 8-94 (205)
404 PRK12748 3-ketoacyl-(acyl-carr 95.6 0.1 2.2E-06 44.5 9.4 34 188-221 4-39 (256)
405 PRK08328 hypothetical protein; 95.6 0.078 1.7E-06 44.9 8.5 34 189-223 27-60 (231)
406 cd01075 NAD_bind_Leu_Phe_Val_D 95.6 0.35 7.5E-06 40.0 12.1 47 187-238 26-73 (200)
407 PRK10675 UDP-galactose-4-epime 95.6 0.14 2.9E-06 45.6 10.4 80 191-271 2-83 (338)
408 TIGR00507 aroE shikimate 5-deh 95.6 0.09 1.9E-06 45.6 9.0 48 179-231 107-154 (270)
409 COG0373 HemA Glutamyl-tRNA red 95.5 0.15 3.3E-06 46.6 10.5 86 176-274 165-251 (414)
410 TIGR02632 RhaD_aldol-ADH rhamn 95.5 0.086 1.9E-06 51.9 9.7 80 188-271 413-503 (676)
411 PRK12549 shikimate 5-dehydroge 95.5 0.079 1.7E-06 46.3 8.4 42 187-233 125-167 (284)
412 PRK05690 molybdopterin biosynt 95.5 0.094 2E-06 44.8 8.7 35 189-224 32-66 (245)
413 TIGR02355 moeB molybdopterin s 95.5 0.14 3.1E-06 43.6 9.7 34 190-224 25-58 (240)
414 PRK00107 gidB 16S rRNA methylt 95.5 0.1 2.2E-06 42.7 8.5 93 185-288 42-142 (187)
415 TIGR01181 dTDP_gluc_dehyt dTDP 95.5 0.08 1.7E-06 46.4 8.6 78 191-271 1-83 (317)
416 cd00755 YgdL_like Family of ac 95.5 0.093 2E-06 44.4 8.5 82 190-274 12-115 (231)
417 PRK07577 short chain dehydroge 95.5 0.079 1.7E-06 44.3 8.2 35 188-222 2-36 (234)
418 PRK07069 short chain dehydroge 95.5 0.057 1.2E-06 45.7 7.3 31 191-221 1-31 (251)
419 TIGR01472 gmd GDP-mannose 4,6- 95.4 0.095 2.1E-06 46.9 9.0 81 190-271 1-88 (343)
420 PLN02366 spermidine synthase 95.4 0.14 3.1E-06 45.2 9.8 95 187-288 90-203 (308)
421 PRK06719 precorrin-2 dehydroge 95.4 0.044 9.5E-07 43.5 6.0 79 188-281 12-90 (157)
422 PRK06550 fabG 3-ketoacyl-(acyl 95.4 0.064 1.4E-06 45.0 7.4 34 188-221 4-37 (235)
423 PF01370 Epimerase: NAD depend 95.4 0.039 8.3E-07 46.2 6.0 75 192-272 1-76 (236)
424 TIGR01809 Shik-DH-AROM shikima 95.4 0.072 1.6E-06 46.5 7.7 76 188-273 124-202 (282)
425 PLN02583 cinnamoyl-CoA reducta 95.3 0.19 4.2E-06 44.0 10.4 35 187-221 4-38 (297)
426 PRK15116 sulfur acceptor prote 95.3 0.16 3.4E-06 44.0 9.5 35 188-223 29-63 (268)
427 COG0031 CysK Cysteine synthase 95.3 0.13 2.8E-06 45.0 8.9 60 184-245 57-116 (300)
428 cd01487 E1_ThiF_like E1_ThiF_l 95.3 0.1 2.3E-06 42.1 7.8 32 191-223 1-32 (174)
429 PRK05597 molybdopterin biosynt 95.3 0.12 2.5E-06 46.8 8.9 81 190-274 29-131 (355)
430 COG2264 PrmA Ribosomal protein 95.2 0.16 3.4E-06 44.5 9.2 142 126-288 108-260 (300)
431 PRK10217 dTDP-glucose 4,6-dehy 95.2 0.12 2.7E-06 46.3 9.1 80 190-271 2-84 (355)
432 PRK11207 tellurite resistance 95.2 0.051 1.1E-06 44.8 5.9 92 184-287 26-130 (197)
433 COG0569 TrkA K+ transport syst 95.2 0.21 4.6E-06 42.1 9.7 83 191-281 2-86 (225)
434 cd05313 NAD_bind_2_Glu_DH NAD( 95.2 0.19 4.2E-06 43.0 9.4 34 187-221 36-69 (254)
435 PRK00258 aroE shikimate 5-dehy 95.1 0.17 3.8E-06 44.0 9.4 42 187-233 121-163 (278)
436 PRK12769 putative oxidoreducta 95.1 0.067 1.4E-06 52.5 7.4 79 187-272 325-423 (654)
437 cd05311 NAD_bind_2_malic_enz N 95.1 0.39 8.5E-06 40.5 11.2 97 179-286 15-123 (226)
438 PLN02695 GDP-D-mannose-3',5'-e 95.1 0.11 2.4E-06 47.1 8.3 36 186-221 18-53 (370)
439 PRK07402 precorrin-6B methylas 95.1 0.5 1.1E-05 38.7 11.5 98 180-288 32-139 (196)
440 PRK14106 murD UDP-N-acetylmura 95.1 0.1 2.2E-06 48.7 8.2 77 188-274 4-81 (450)
441 COG4122 Predicted O-methyltran 95.1 0.14 2.9E-06 42.9 8.0 99 182-288 53-163 (219)
442 TIGR03466 HpnA hopanoid-associ 95.1 0.072 1.6E-06 47.0 6.9 73 191-271 2-74 (328)
443 PRK08762 molybdopterin biosynt 95.0 0.13 2.9E-06 46.8 8.6 35 188-223 134-168 (376)
444 PF00899 ThiF: ThiF family; I 95.0 0.085 1.8E-06 40.5 6.4 35 189-224 2-36 (135)
445 PRK00312 pcm protein-L-isoaspa 95.0 0.12 2.6E-06 42.9 7.7 96 182-288 72-172 (212)
446 PLN02928 oxidoreductase family 95.0 0.097 2.1E-06 47.2 7.5 33 188-221 158-190 (347)
447 PRK12859 3-ketoacyl-(acyl-carr 95.0 0.23 5.1E-06 42.3 9.7 33 188-220 5-39 (256)
448 PTZ00079 NADP-specific glutama 95.0 0.41 8.8E-06 44.4 11.6 35 187-222 235-269 (454)
449 PRK01581 speE spermidine synth 95.0 0.29 6.3E-06 44.1 10.3 93 188-288 150-265 (374)
450 PRK14027 quinate/shikimate deh 95.0 0.36 7.9E-06 42.2 10.8 43 187-233 125-167 (283)
451 TIGR02354 thiF_fam2 thiamine b 94.9 0.17 3.8E-06 41.8 8.4 33 190-223 22-54 (200)
452 COG0169 AroE Shikimate 5-dehyd 94.9 0.12 2.6E-06 45.1 7.6 43 186-233 123-166 (283)
453 PRK11908 NAD-dependent epimera 94.9 0.22 4.8E-06 44.6 9.7 74 190-270 2-77 (347)
454 PRK02472 murD UDP-N-acetylmura 94.9 0.15 3.3E-06 47.4 8.8 77 188-273 4-80 (447)
455 PF01118 Semialdhyde_dh: Semia 94.9 0.11 2.3E-06 39.2 6.4 87 191-286 1-92 (121)
456 PRK05600 thiamine biosynthesis 94.8 0.17 3.6E-06 46.0 8.7 34 189-223 41-74 (370)
457 PRK12749 quinate/shikimate deh 94.8 0.32 7E-06 42.6 10.2 34 187-221 122-156 (288)
458 PLN03075 nicotianamine synthas 94.8 0.2 4.3E-06 43.9 8.7 103 177-288 113-230 (296)
459 cd01065 NAD_bind_Shikimate_DH 94.8 0.24 5.3E-06 38.7 8.6 75 187-273 17-93 (155)
460 TIGR01830 3oxo_ACP_reduc 3-oxo 94.8 0.15 3.3E-06 42.6 7.9 80 192-271 1-86 (239)
461 COG1028 FabG Dehydrogenases wi 94.8 0.29 6.3E-06 41.4 9.6 35 188-222 4-38 (251)
462 COG0686 Ald Alanine dehydrogen 94.7 0.2 4.4E-06 43.7 8.3 203 74-288 29-265 (371)
463 PLN02476 O-methyltransferase 94.7 0.21 4.6E-06 43.4 8.6 103 180-288 110-225 (278)
464 TIGR03840 TMPT_Se_Te thiopurin 94.7 0.13 2.7E-06 43.0 7.0 95 186-287 32-148 (213)
465 cd01483 E1_enzyme_family Super 94.6 0.29 6.4E-06 37.9 8.6 32 191-223 1-32 (143)
466 TIGR01214 rmlD dTDP-4-dehydror 94.6 0.13 2.9E-06 44.5 7.3 31 191-221 1-31 (287)
467 KOG1252 Cystathionine beta-syn 94.6 0.15 3.1E-06 45.0 7.2 61 183-244 97-157 (362)
468 cd05211 NAD_bind_Glu_Leu_Phe_V 94.6 0.4 8.6E-06 40.2 9.7 35 187-222 21-55 (217)
469 PF02558 ApbA: Ketopantoate re 94.6 0.11 2.5E-06 40.4 6.2 83 192-283 1-89 (151)
470 KOG1207 Diacetyl reductase/L-x 94.6 0.22 4.8E-06 39.9 7.6 80 188-271 6-87 (245)
471 PRK14192 bifunctional 5,10-met 94.6 0.31 6.6E-06 42.6 9.3 41 180-220 150-190 (283)
472 PLN02781 Probable caffeoyl-CoA 94.5 0.24 5.1E-06 42.0 8.4 103 180-288 60-175 (234)
473 PRK12550 shikimate 5-dehydroge 94.5 0.29 6.2E-06 42.5 9.0 48 185-237 118-167 (272)
474 PRK01438 murD UDP-N-acetylmura 94.5 0.2 4.4E-06 47.1 8.8 77 187-274 14-91 (480)
475 TIGR01777 yfcH conserved hypot 94.5 0.036 7.9E-07 48.0 3.5 31 192-222 1-31 (292)
476 PRK00536 speE spermidine synth 94.5 0.16 3.4E-06 43.8 7.2 90 190-288 74-168 (262)
477 PRK07578 short chain dehydroge 94.5 0.17 3.6E-06 41.4 7.2 30 191-221 2-31 (199)
478 PRK07574 formate dehydrogenase 94.5 0.19 4.1E-06 45.9 8.1 33 188-221 191-223 (385)
479 TIGR00243 Dxr 1-deoxy-D-xylulo 94.4 0.53 1.1E-05 42.6 10.6 92 190-284 2-117 (389)
480 PRK07023 short chain dehydroge 94.4 0.22 4.7E-06 42.0 8.1 32 191-222 3-34 (243)
481 PRK06522 2-dehydropantoate 2-r 94.4 0.22 4.8E-06 43.7 8.3 84 191-283 2-88 (304)
482 PRK14194 bifunctional 5,10-met 94.4 0.3 6.5E-06 42.9 8.8 54 168-221 138-191 (301)
483 COG0334 GdhA Glutamate dehydro 94.4 0.44 9.6E-06 43.4 10.0 35 187-222 205-239 (411)
484 PRK14189 bifunctional 5,10-met 94.4 0.38 8.3E-06 41.9 9.3 53 168-220 137-189 (285)
485 PRK08125 bifunctional UDP-gluc 94.4 0.19 4.1E-06 49.4 8.4 36 186-221 312-348 (660)
486 PRK08317 hypothetical protein; 94.4 0.17 3.6E-06 42.4 7.1 96 181-288 12-121 (241)
487 PRK14188 bifunctional 5,10-met 94.3 0.37 8E-06 42.3 9.3 53 168-220 137-189 (296)
488 PF13241 NAD_binding_7: Putati 94.3 0.042 9.1E-07 40.2 2.9 81 188-287 6-87 (103)
489 PRK11036 putative S-adenosyl-L 94.3 0.33 7.2E-06 41.6 9.0 93 187-288 43-146 (255)
490 PRK14030 glutamate dehydrogena 94.3 0.83 1.8E-05 42.4 11.9 33 187-220 226-258 (445)
491 cd00757 ThiF_MoeB_HesA_family 94.3 0.39 8.4E-06 40.5 9.2 34 189-223 21-54 (228)
492 PRK08223 hypothetical protein; 94.3 0.2 4.4E-06 43.6 7.5 35 189-224 27-61 (287)
493 PF04321 RmlD_sub_bind: RmlD s 94.3 0.087 1.9E-06 46.1 5.3 30 191-220 2-31 (286)
494 PLN00016 RNA-binding protein; 94.2 0.24 5.1E-06 45.1 8.2 88 189-282 52-153 (378)
495 PRK08300 acetaldehyde dehydrog 94.2 0.33 7.1E-06 42.7 8.6 89 190-285 5-95 (302)
496 PLN02696 1-deoxy-D-xylulose-5- 94.2 0.68 1.5E-05 42.9 10.9 92 190-284 58-173 (454)
497 cd01492 Aos1_SUMO Ubiquitin ac 94.1 0.24 5.1E-06 40.9 7.4 34 190-224 22-55 (197)
498 PLN03139 formate dehydrogenase 94.1 0.22 4.8E-06 45.4 7.7 32 188-220 198-229 (386)
499 KOG4169 15-hydroxyprostaglandi 94.1 0.23 5E-06 41.5 7.0 79 189-271 5-93 (261)
500 smart00822 PKS_KR This enzymat 94.1 0.49 1.1E-05 37.1 9.0 82 190-271 1-91 (180)
No 1
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=8.5e-46 Score=328.04 Aligned_cols=235 Identities=31% Similarity=0.394 Sum_probs=218.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+.+.++. ++++|.|.|.+.++||+|||.++++|+.|...+.|......++|.++|.|++|+|+++|+++++|
T Consensus 1 mka~~~~~~g~~~~-l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 1 MKAVVVEEFGGPEV-LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred CeEEEEeccCCCce-eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence 68999999999877 99999999999999999999999999999999998744444689999999999999999999999
Q ss_pred CCCCEEEecC-C-CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007 128 APGDWVIPSP-P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205 (288)
Q Consensus 128 ~~Gd~V~~~~-~-~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a 205 (288)
++||+|+... . ..|+|+||..+|++.++++|+++++++||++++.++|||++++...++++|++|||+|++|++|+++
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~a 159 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAA 159 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Confidence 9999999984 2 2599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR 284 (288)
Q Consensus 206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~ 284 (288)
+|+|+++|+++++++ .++++.++++++|+++++++++. +.+.+++++++++ +|+|||++|++.+..++++|+++
T Consensus 160 iQlAk~~G~~~v~~~----~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~g-vDvv~D~vG~~~~~~~l~~l~~~ 234 (326)
T COG0604 160 IQLAKALGATVVAVV----SSSEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALAPG 234 (326)
T ss_pred HHHHHHcCCcEEEEe----cCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCC-ceEEEECCCHHHHHHHHHHhccC
Confidence 999999998877777 57777789999999999998876 5688999999977 99999999999999999999999
Q ss_pred CeeC
Q 023007 285 EEQW 288 (288)
Q Consensus 285 G~~v 288 (288)
|+++
T Consensus 235 G~lv 238 (326)
T COG0604 235 GRLV 238 (326)
T ss_pred CEEE
Confidence 9985
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=6.6e-45 Score=316.33 Aligned_cols=228 Identities=29% Similarity=0.363 Sum_probs=208.6
Q ss_pred CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (288)
Q Consensus 45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~ 124 (288)
+.+||++++++++.+ +++.+++.|+|.++||+|+|.|+|+|++|++.+.|..+.. .+|.++|||.+|+|+++|++|
T Consensus 1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~~vG~~V 76 (339)
T COG1064 1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVVEVGEGV 76 (339)
T ss_pred CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEEEecCCC
Confidence 357999999999997 8899999999999999999999999999999999998876 599999999999999999999
Q ss_pred CCCCCCCEEEe-cCCC--------------------------CcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHH
Q 023007 125 TRLAPGDWVIP-SPPS--------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 177 (288)
Q Consensus 125 ~~~~~Gd~V~~-~~~~--------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~ 177 (288)
++|++||+|.. +... +|+|+||+++|+++++++|+++++.+||.+.+++.|.|
T Consensus 77 ~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y 156 (339)
T COG1064 77 TGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY 156 (339)
T ss_pred ccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence 99999999988 3311 99999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHh
Q 023007 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLL 256 (288)
Q Consensus 178 ~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~ 256 (288)
++|++ .+++||++|+|+|. |++|.+++|+|+++|++|+++. .++++.+.+++||++++++..+.+ .+.+++
T Consensus 157 ~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~----~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~-- 228 (339)
T COG1064 157 RALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAIT----RSEEKLELAKKLGADHVINSSDSDALEAVKE-- 228 (339)
T ss_pred eehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEe----CChHHHHHHHHhCCcEEEEcCCchhhHHhHh--
Confidence 99987 99999999999999 7999999999999999999999 689999999999999999987432 334433
Q ss_pred cCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 257 ANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
.+|+++|+++...++.+++.|+++|++|
T Consensus 229 ----~~d~ii~tv~~~~~~~~l~~l~~~G~~v 256 (339)
T COG1064 229 ----IADAIIDTVGPATLEPSLKALRRGGTLV 256 (339)
T ss_pred ----hCcEEEECCChhhHHHHHHHHhcCCEEE
Confidence 2999999999555599999999999985
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.3e-40 Score=269.16 Aligned_cols=236 Identities=25% Similarity=0.305 Sum_probs=221.3
Q ss_pred CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (288)
Q Consensus 45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~ 124 (288)
|...|.+++++.|..+ ++++++.|.|+|.++|++||..|+|+|+.|.....|-+. .++.|.++|.|.+|+|+++|+++
T Consensus 6 p~~~k~i~v~e~Ggyd-vlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 6 PPLLKCIVVTEFGGYD-VLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CchheEEEEeccCCcc-eEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCc
Confidence 4456889999988875 599999999999999999999999999999999999885 34789999999999999999999
Q ss_pred CCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHH
Q 023007 125 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 204 (288)
Q Consensus 125 ~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~ 204 (288)
+++++||+|+-+.+ .|.|+++..+|...+.++|+.+++.+||++.+.++|||..+++..++++|++|||+.++|++|++
T Consensus 84 tdrkvGDrVayl~~-~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGll 162 (336)
T KOG1197|consen 84 TDRKVGDRVAYLNP-FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLL 162 (336)
T ss_pred cccccccEEEEecc-chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHH
Confidence 99999999998875 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF 283 (288)
Q Consensus 205 a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~ 283 (288)
+.|+++..|+.+|.++ ++.++.+.+++-|+.|.++++.++ ++++...|++.| +|+++|.+|.+.+..++.+|++
T Consensus 163 l~Ql~ra~~a~tI~~a----sTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~dt~~~sl~~Lk~ 237 (336)
T KOG1197|consen 163 LCQLLRAVGAHTIATA----STAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKDTFAKSLAALKP 237 (336)
T ss_pred HHHHHHhcCcEEEEEe----ccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccchhhHHHHHHhcc
Confidence 9999999999999999 689999999999999999998765 689999999987 9999999999999999999999
Q ss_pred CCeeC
Q 023007 284 REEQW 288 (288)
Q Consensus 284 ~G~~v 288 (288)
.|.+|
T Consensus 238 ~G~mV 242 (336)
T KOG1197|consen 238 MGKMV 242 (336)
T ss_pred CceEE
Confidence 99875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-40 Score=279.94 Aligned_cols=233 Identities=23% Similarity=0.254 Sum_probs=203.2
Q ss_pred CccceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCC--CCCcccccceEEEEEEec
Q 023007 45 SPPSKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVG 121 (288)
Q Consensus 45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~~G 121 (288)
..+|+++++.+.++ +++++.|.|++ .|+||+|++.++|||++|.+.+.......+ +.|.++|||.+|+|+++|
T Consensus 2 ~~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG 77 (354)
T KOG0024|consen 2 AADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG 77 (354)
T ss_pred CcccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence 45789999999998 88999999986 999999999999999999999986543332 579999999999999999
Q ss_pred CCCCCCCCCCEEEecCCC---------------------------CcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007 122 SAVTRLAPGDWVIPSPPS---------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174 (288)
Q Consensus 122 ~~~~~~~~Gd~V~~~~~~---------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ 174 (288)
++|+++++||||+.-+.. +|++++|++.+++.++|+|++++++++|.+. +++
T Consensus 78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs 156 (354)
T KOG0024|consen 78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS 156 (354)
T ss_pred ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence 999999999999987632 8999999999999999999999999999988 699
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHH--
Q 023007 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKN-- 251 (288)
Q Consensus 175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~-- 251 (288)
.+||+.++ +++++|++|||+|+ |++|+++...|+.+|+.-+++++ ..++|++.+++||++.+.+..... .+.
T Consensus 157 V~~HAcr~-~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d---~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~ 231 (354)
T KOG0024|consen 157 VGVHACRR-AGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITD---LVANRLELAKKFGATVTDPSSHKSSPQELA 231 (354)
T ss_pred hhhhhhhh-cCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEee---cCHHHHHHHHHhCCeEEeeccccccHHHHH
Confidence 99999976 99999999999999 99999999999999997666665 589999999999999987765432 333
Q ss_pred --HHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 252 --VKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 252 --i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+....+... +|+.|||+|.+.. +.++..++.+|.+|
T Consensus 232 ~~v~~~~g~~~-~d~~~dCsG~~~~~~aai~a~r~gGt~v 270 (354)
T KOG0024|consen 232 ELVEKALGKKQ-PDVTFDCSGAEVTIRAAIKATRSGGTVV 270 (354)
T ss_pred HHHHhhccccC-CCeEEEccCchHHHHHHHHHhccCCEEE
Confidence 333333333 9999999999887 99999999999864
No 5
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=6.4e-39 Score=273.77 Aligned_cols=231 Identities=26% Similarity=0.346 Sum_probs=213.2
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
++|+.+..++++| ++++++..++|+++||+||+.++|+|++|....+|..+.. +|.++|||++|+|+++|++|++
T Consensus 2 k~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~ 76 (366)
T COG1062 2 KTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTS 76 (366)
T ss_pred CceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccc
Confidence 4688999999988 8999999999999999999999999999999999998874 8999999999999999999999
Q ss_pred CCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEEEcCC
Q 023007 127 LAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKVSK 159 (288)
Q Consensus 127 ~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~~ip~ 159 (288)
++|||+|+..+.- .++|++|.++++..++|+++
T Consensus 77 vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~ 156 (366)
T COG1062 77 VKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDP 156 (366)
T ss_pred cCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCC
Confidence 9999999987641 45899999999999999999
Q ss_pred CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD 239 (288)
Q Consensus 160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~ 239 (288)
+.+++.++.+.+...|.+.+..+.+++++|++|.|+|. |++|++++|-|+..|+..|+.++ .+++|++++++||++
T Consensus 157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD---~~~~Kl~~A~~fGAT 232 (366)
T COG1062 157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD---INPEKLELAKKFGAT 232 (366)
T ss_pred CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe---CCHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999 99999999999999997777766 589999999999999
Q ss_pred EEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 240 EVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 240 ~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+++|..+. -++.+.++|++ ++|.+|||+|+... ++++++..++|+.|
T Consensus 233 ~~vn~~~~~~vv~~i~~~T~g--G~d~~~e~~G~~~~~~~al~~~~~~G~~v 282 (366)
T COG1062 233 HFVNPKEVDDVVEAIVELTDG--GADYAFECVGNVEVMRQALEATHRGGTSV 282 (366)
T ss_pred eeecchhhhhHHHHHHHhcCC--CCCEEEEccCCHHHHHHHHHHHhcCCeEE
Confidence 99999876 35789999997 49999999999776 99999999999864
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.7e-38 Score=285.84 Aligned_cols=235 Identities=23% Similarity=0.281 Sum_probs=205.8
Q ss_pred CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007 44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA 123 (288)
Q Consensus 44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~ 123 (288)
.+.+||++++.+++.+ +.+++.+.|++.++||+|||.++++|++|++.+.|..+....+|.++|||++|+|+++|++
T Consensus 7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 4568999999987753 6788999999999999999999999999999998875443456899999999999999999
Q ss_pred CCCCCCCCEEEecCC--------------------------------------------------CCcccceEEEeeCCc
Q 023007 124 VTRLAPGDWVIPSPP--------------------------------------------------SSGTWQSYVVKDQSV 153 (288)
Q Consensus 124 ~~~~~~Gd~V~~~~~--------------------------------------------------~~G~~a~~~~~~~~~ 153 (288)
+++|++||+|++.+. ..|+|+||++++.+.
T Consensus 84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~ 163 (381)
T PLN02740 84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC 163 (381)
T ss_pred CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence 999999999987531 148999999999999
Q ss_pred EEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHH
Q 023007 154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK 232 (288)
Q Consensus 154 l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~ 232 (288)
++++|+++++++++.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++. .++++++.
T Consensus 164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~----~~~~r~~~ 238 (381)
T PLN02740 164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVD----INPEKFEK 238 (381)
T ss_pred eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEc----CChHHHHH
Confidence 99999999999999999999999999887789999999999997 9999999999999999 577776 57889999
Q ss_pred HHhCCCCEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007 233 LKGLGADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW 288 (288)
Q Consensus 233 ~~~~g~~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v 288 (288)
++++|+++++++++. ..+.+.+++++ + +|++|||+|+.. +..++++++++ |++|
T Consensus 239 a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g-~dvvid~~G~~~~~~~a~~~~~~g~G~~v 297 (381)
T PLN02740 239 GKEMGITDFINPKDSDKPVHERIREMTGG-G-VDYSFECAGNVEVLREAFLSTHDGWGLTV 297 (381)
T ss_pred HHHcCCcEEEecccccchHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhhcCCCEEE
Confidence 999999999987653 34667777776 5 999999999865 59999999996 9874
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.4e-38 Score=285.12 Aligned_cols=232 Identities=24% Similarity=0.285 Sum_probs=204.3
Q ss_pred ceEEEEccCCCC-----CcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007 48 SKAVVYEREGPP-----DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS 122 (288)
Q Consensus 48 ~~a~~~~~~g~~-----~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~ 122 (288)
||++++.++|.+ .+.+++++.|.|++.++||+|||.++++|++|++.+.|.++. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 789999988754 355899999999999999999999999999999999886543 4688999999999999999
Q ss_pred CCCCCCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEE
Q 023007 123 AVTRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWH 155 (288)
Q Consensus 123 ~~~~~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~ 155 (288)
++++|++||+|++.+.. .|+|+||+.++.+.++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999874210 1689999999999999
Q ss_pred EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH
Q 023007 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK 234 (288)
Q Consensus 156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~ 234 (288)
++|+++++++++.++++++|||+++...+++++|++|+|.|+ |++|++++|+|+.+|+ +|+++. .++++++.++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~----~~~~r~~~a~ 233 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD----LNEDKLALAR 233 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHH
Confidence 999999999999999999999999887789999999999997 9999999999999999 577776 5889999999
Q ss_pred hCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 235 GLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 235 ~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
++|+++++++++. ..+.+++++++ + +|++|||+|... .+.++++++++|+++
T Consensus 234 ~~Ga~~~i~~~~~~~~~~i~~~~~~-g-~d~vid~~G~~~~~~~~~~~l~~~G~iv 287 (371)
T cd08281 234 ELGATATVNAGDPNAVEQVRELTGG-G-VDYAFEMAGSVPALETAYEITRRGGTTV 287 (371)
T ss_pred HcCCceEeCCCchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence 9999999998754 35677778776 4 999999999754 499999999999985
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=6e-38 Score=282.98 Aligned_cols=231 Identities=20% Similarity=0.251 Sum_probs=204.3
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
|||++++++++.+ +++++.|.|++.++||+|||.++++|++|++.+.|..+. .+|.++|||++|+|+++|+++++
T Consensus 1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~ 75 (358)
T TIGR03451 1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTD 75 (358)
T ss_pred CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcc
Confidence 6899999998875 788999999999999999999999999999988876432 45889999999999999999999
Q ss_pred CCCCCEEEecCC---------------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhc
Q 023007 127 LAPGDWVIPSPP---------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA 167 (288)
Q Consensus 127 ~~~Gd~V~~~~~---------------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa 167 (288)
|++||+|++.+. ..|+|+||+.++...++++|+++++++++
T Consensus 76 ~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa 155 (358)
T TIGR03451 76 VAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG 155 (358)
T ss_pred cCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhh
Confidence 999999986321 14899999999999999999999999999
Q ss_pred ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc
Q 023007 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246 (288)
Q Consensus 168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~ 246 (288)
.+++.+.++|+++.+.+.+++|++|||+|+ |++|++++|+|+.+|++ |+++. .++++.++++++|+++++++++
T Consensus 156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~----~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVD----IDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCceEEcCCC
Confidence 999999999999888788999999999986 99999999999999996 77766 5789999999999999998876
Q ss_pred c-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 247 L-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 247 ~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
. ..+.+.+++++.+ +|++|||+|++. .+.++++++++|++|
T Consensus 231 ~~~~~~i~~~~~~~g-~d~vid~~g~~~~~~~~~~~~~~~G~iv 273 (358)
T TIGR03451 231 TDPVEAIRALTGGFG-ADVVIDAVGRPETYKQAFYARDLAGTVV 273 (358)
T ss_pred cCHHHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence 4 3467788887766 999999999854 488999999999985
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=6.6e-38 Score=280.58 Aligned_cols=230 Identities=22% Similarity=0.274 Sum_probs=202.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++++++. +++++.|.|++.++||+||+.++++|++|.+.+.+.+......|.++|||++|+|+++|+++++|
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (339)
T cd08239 1 MRGAVFPGDRT----VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHF 76 (339)
T ss_pred CeEEEEecCCc----eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccC
Confidence 68999987654 89999999999999999999999999999998876543222347899999999999999999999
Q ss_pred CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
++||+|+..+. ..|+|++|+.++.+.++++|+++++.+++.+++++.|||+++
T Consensus 77 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l 156 (339)
T cd08239 77 RVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL 156 (339)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999987641 158999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~ 259 (288)
.. ..+++|++|+|+|+ |++|++++|+++.+|++ ++++. .++++.+.++++|+++++++++...+.+.+++++.
T Consensus 157 ~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 230 (339)
T cd08239 157 RR-VGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVD----PSPERLELAKALGADFVINSGQDDVQEIRELTSGA 230 (339)
T ss_pred Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCC
Confidence 65 78899999999987 99999999999999999 88776 57889999999999999998764456677777766
Q ss_pred CCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+ +|++|||+|+... +.++++++++|+++
T Consensus 231 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v 259 (339)
T cd08239 231 G-ADVAIECSGNTAARRLALEAVRPWGRLV 259 (339)
T ss_pred C-CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 5 9999999999876 88999999999985
No 10
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4.3e-38 Score=261.67 Aligned_cols=248 Identities=51% Similarity=0.818 Sum_probs=224.4
Q ss_pred ccCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007 41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120 (288)
Q Consensus 41 ~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~ 120 (288)
+..++...|+++++..|+|.+++++++.+.|....++|+||.+++.|||+|+..+.|.|+.++++|.+-|.|++|+|+.+
T Consensus 13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~v 92 (354)
T KOG0025|consen 13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAV 92 (354)
T ss_pred ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEe
Confidence 44567778999999999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh
Q 023007 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 200 (288)
Q Consensus 121 G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ 200 (288)
|+++.+|++||+|+......|+|++|.+.+++.++++++.+++..||++..+.+|||..|.+..++++|++|.=.|++++
T Consensus 93 Gs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~ 172 (354)
T KOG0025|consen 93 GSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSG 172 (354)
T ss_pred cCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280 (288)
Q Consensus 201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~ 280 (288)
+|++.+|+|+++|++.+-++++.+..++..+.++.+|+++++...+..-..+.......+++-+.|||+|+.......+.
T Consensus 173 VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~ 252 (354)
T KOG0025|consen 173 VGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARY 252 (354)
T ss_pred HHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHH
Confidence 99999999999999999999988777888888999999999975443212222222223358999999999999899999
Q ss_pred ccCCCeeC
Q 023007 281 LRFREEQW 288 (288)
Q Consensus 281 l~~~G~~v 288 (288)
|.+||..|
T Consensus 253 L~~Ggtmv 260 (354)
T KOG0025|consen 253 LERGGTMV 260 (354)
T ss_pred HhcCceEE
Confidence 99998754
No 11
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.7e-37 Score=279.60 Aligned_cols=230 Identities=24% Similarity=0.312 Sum_probs=201.8
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++..++.. +++++.|.|++.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~ 77 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSV 77 (368)
T ss_pred ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccC
Confidence 788998887754 888999999999999999999999999999999887543 2568999999999999999999999
Q ss_pred CCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCCC
Q 023007 128 APGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD 160 (288)
Q Consensus 128 ~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~~ 160 (288)
++||+|++.+. ..|+|+||+++|...++++|++
T Consensus 78 ~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~ 157 (368)
T TIGR02818 78 KVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPA 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCC
Confidence 99999987531 0268999999999999999999
Q ss_pred CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD 239 (288)
Q Consensus 161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~ 239 (288)
+++++++.+++++.|||+++.+.+.+++|++|||+|+ |++|++++|+|+.+|+ +|+++. .++++++.++++|++
T Consensus 158 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~----~~~~~~~~a~~~Ga~ 232 (368)
T TIGR02818 158 APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID----INPAKFELAKKLGAT 232 (368)
T ss_pred CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCC
Confidence 9999999999999999999987789999999999987 9999999999999999 687776 588999999999999
Q ss_pred EEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007 240 EVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW 288 (288)
Q Consensus 240 ~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v 288 (288)
+++++++. ..+.+.+++++ + +|++|||+|+.. ...++++++++ |+++
T Consensus 233 ~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~~~~~~~~~G~~v 284 (368)
T TIGR02818 233 DCVNPNDYDKPIQEVIVEITDG-G-VDYSFECIGNVNVMRAALECCHKGWGESI 284 (368)
T ss_pred eEEcccccchhHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCCeEE
Confidence 99987642 23567777776 4 999999999755 48999999886 9874
No 12
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-37 Score=262.22 Aligned_cols=236 Identities=24% Similarity=0.260 Sum_probs=203.2
Q ss_pred CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007 43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS 122 (288)
Q Consensus 43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~ 122 (288)
..|.+.++|.++..+.... .++.+++.|++.++||+|+++|+|+|++|++.+.|..+. -++|.++|||.+|+|+++|+
T Consensus 5 ~~p~k~~g~~~~~~~G~l~-p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs 82 (360)
T KOG0023|consen 5 SIPEKQFGWAARDPSGVLS-PEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGS 82 (360)
T ss_pred cCchhhEEEEEECCCCCCC-cceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECC
Confidence 3467789999999887533 678999999999999999999999999999999998877 58999999999999999999
Q ss_pred CCCCCCCCCEEEecCC---C-------------------------------CcccceEEEeeCCcEEEcCCCCChhhhcc
Q 023007 123 AVTRLAPGDWVIPSPP---S-------------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168 (288)
Q Consensus 123 ~~~~~~~Gd~V~~~~~---~-------------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~ 168 (288)
+|++|++||+|-.=+- + .|+|++|+++++.+.++||++++++.||.
T Consensus 83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAP 162 (360)
T KOG0023|consen 83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAP 162 (360)
T ss_pred CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccc
Confidence 9999999999854210 0 56699999999999999999999999999
Q ss_pred cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-c
Q 023007 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L 247 (288)
Q Consensus 169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~ 247 (288)
+.+++.|.|..|.. .++.||+++.|.|+ |++|.+++|+|+++|.+|+++.. .+.++.+.++.||++.+++..+ .
T Consensus 163 lLCaGITvYspLk~-~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~---~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 163 LLCAGITVYSPLKR-SGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVIST---SSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred hhhcceEEeehhHH-cCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeC---CchhHHHHHHhcCcceeEEecCCH
Confidence 99999999999976 88889999999999 55999999999999999999984 2346777888999999988763 3
Q ss_pred -cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 248 -EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 248 -~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
..+.+...+++ .+|.+.+. ....++.++.+|+++|++|
T Consensus 238 d~~~~~~~~~dg--~~~~v~~~-a~~~~~~~~~~lk~~Gt~V 276 (360)
T KOG0023|consen 238 DIMKAIMKTTDG--GIDTVSNL-AEHALEPLLGLLKVNGTLV 276 (360)
T ss_pred HHHHHHHHhhcC--cceeeeec-cccchHHHHHHhhcCCEEE
Confidence 34666666666 47777766 4455699999999999986
No 13
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-37 Score=261.56 Aligned_cols=232 Identities=25% Similarity=0.302 Sum_probs=210.4
Q ss_pred CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (288)
Q Consensus 45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~ 124 (288)
+.++|+.+.++++.| +.++|+..++|+.+||+||+.++++|++|...++|..+. ..+|.++|||.+|+|+++|.+|
T Consensus 5 vI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~-~~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 5 VITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPE-GLFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred ceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCcc-ccCceEecccceeEEEEecCCc
Confidence 457999999999998 889999999999999999999999999999999998644 4789999999999999999999
Q ss_pred CCCCCCCEEEecCCC------------------------------------------------CcccceEEEeeCCcEEE
Q 023007 125 TRLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVWHK 156 (288)
Q Consensus 125 ~~~~~Gd~V~~~~~~------------------------------------------------~G~~a~~~~~~~~~l~~ 156 (288)
+++++||+|+.+... ..+|+||.+++...+++
T Consensus 81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 999999999987521 34899999999999999
Q ss_pred cCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC
Q 023007 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL 236 (288)
Q Consensus 157 ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~ 236 (288)
|++..+++.++.+.+...|+|.+..+.++++||+++.|+|. |++|+++++-|+..|+..|+-+| -+++|++.+++|
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvD---iN~~Kf~~ak~f 236 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVD---INPDKFEKAKEF 236 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEe---cCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999 99999999999999996666655 589999999999
Q ss_pred CCCEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCC-Ce
Q 023007 237 GADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR-EE 286 (288)
Q Consensus 237 g~~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~-G~ 286 (288)
|+++++|+.+. ..+.+.+.|++ ++|.-|||.|+..+ .+++.+...+ |.
T Consensus 237 GaTe~iNp~d~~~~i~evi~EmTdg--GvDysfEc~G~~~~m~~al~s~h~GwG~ 289 (375)
T KOG0022|consen 237 GATEFINPKDLKKPIQEVIIEMTDG--GVDYSFECIGNVSTMRAALESCHKGWGK 289 (375)
T ss_pred CcceecChhhccccHHHHHHHHhcC--CceEEEEecCCHHHHHHHHHHhhcCCCe
Confidence 99999999843 24778999997 69999999999887 8899888877 54
No 14
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=8.8e-37 Score=276.34 Aligned_cols=231 Identities=24% Similarity=0.324 Sum_probs=202.5
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
+||++++...+.. +++++.|.|.+.++||+||+.++++|++|.+.+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus 2 ~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~ 77 (368)
T cd08300 2 TCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTS 77 (368)
T ss_pred cceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCcc
Confidence 5789988877654 7889999999999999999999999999999988865432 56889999999999999999999
Q ss_pred CCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCC
Q 023007 127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK 159 (288)
Q Consensus 127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~ 159 (288)
|++||+|++.+. ..|+|+||+.++.+.++++|+
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 157 (368)
T cd08300 78 VKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINP 157 (368)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCC
Confidence 999999987521 125899999999999999999
Q ss_pred CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCC
Q 023007 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA 238 (288)
Q Consensus 160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~ 238 (288)
++++.+++.++.++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +++++. .++++.+.++++|+
T Consensus 158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~----~~~~~~~~~~~lGa 232 (368)
T cd08300 158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID----INPDKFELAKKFGA 232 (368)
T ss_pred CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCC
Confidence 99999999999999999999887789999999999986 9999999999999999 587777 57889999999999
Q ss_pred CEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC-CeeC
Q 023007 239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR-EEQW 288 (288)
Q Consensus 239 ~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~-G~~v 288 (288)
++++++++. ..+.+.+++++ + +|+||||+|+. ..+.++++++++ |+++
T Consensus 233 ~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~g~~~~~~~a~~~l~~~~G~~v 285 (368)
T cd08300 233 TDCVNPKDHDKPIQQVLVEMTDG-G-VDYTFECIGNVKVMRAALEACHKGWGTSV 285 (368)
T ss_pred CEEEcccccchHHHHHHHHHhCC-C-CcEEEECCCChHHHHHHHHhhccCCCeEE
Confidence 999988753 34667778876 4 99999999985 459999999886 9875
No 15
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.3e-36 Score=273.75 Aligned_cols=231 Identities=22% Similarity=0.302 Sum_probs=202.5
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
+||++++.+++.+ +++++.+.|++.++||+||+.++++|++|.+.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus 2 ~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~ 77 (369)
T cd08301 2 TCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTD 77 (369)
T ss_pred ccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCc
Confidence 6899999987764 888999999999999999999999999999998886542 356899999999999999999999
Q ss_pred CCCCCEEEecCC------------------------------------------------CCcccceEEEeeCCcEEEcC
Q 023007 127 LAPGDWVIPSPP------------------------------------------------SSGTWQSYVVKDQSVWHKVS 158 (288)
Q Consensus 127 ~~~Gd~V~~~~~------------------------------------------------~~G~~a~~~~~~~~~l~~ip 158 (288)
|++||+|++.+. ..|+|+||++++..+++++|
T Consensus 78 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 157 (369)
T cd08301 78 LKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKIN 157 (369)
T ss_pred cccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECC
Confidence 999999997521 12789999999999999999
Q ss_pred CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCC
Q 023007 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLG 237 (288)
Q Consensus 159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g 237 (288)
+++++++++.+++.+.|+|+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +++++. .++++.+.++++|
T Consensus 158 ~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~----~~~~~~~~~~~~G 232 (369)
T cd08301 158 PEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVD----LNPSKFEQAKKFG 232 (369)
T ss_pred CCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcC
Confidence 999999999999899999999888889999999999987 9999999999999999 688887 5788999999999
Q ss_pred CCEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007 238 ADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW 288 (288)
Q Consensus 238 ~~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v 288 (288)
++.++++.+. ..+.+++++++ + +|++|||+|+.. ...++++++++ |+++
T Consensus 233 a~~~i~~~~~~~~~~~~v~~~~~~-~-~d~vid~~G~~~~~~~~~~~~~~~~g~~v 286 (369)
T cd08301 233 VTEFVNPKDHDKPVQEVIAEMTGG-G-VDYSFECTGNIDAMISAFECVHDGWGVTV 286 (369)
T ss_pred CceEEcccccchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHhhcCCCEEE
Confidence 9999987652 33567777766 4 999999999865 48899999996 8874
No 16
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=5e-36 Score=266.27 Aligned_cols=234 Identities=30% Similarity=0.471 Sum_probs=208.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++.+.+.+++++.|.|.+.++||+|||.++++|+.|...+.|.++.....|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 68899988776544588999999999999999999999999999998888765333567899999999999999999999
Q ss_pred CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (288)
Q Consensus 128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~ 207 (288)
++||+|++... .|+|++|+.++...++++|+++++.+++.++..+.++|+++.. .++++|++|+|+|++|.+|+++++
T Consensus 81 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~ 158 (324)
T cd08292 81 QVGQRVAVAPV-HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAM 158 (324)
T ss_pred CCCCEEEeccC-CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHH
Confidence 99999998753 4899999999999999999999999999999999999998854 889999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE 286 (288)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~ 286 (288)
+|+.+|++++.++ .++++.+.++++|.++++++++. ..+.+.+++++++ +|++|||+|+.....++++++++|+
T Consensus 159 ~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~d~~g~~~~~~~~~~l~~~g~ 233 (324)
T cd08292 159 LAAARGINVINLV----RRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAP-ISVALDSVGGKLAGELLSLLGEGGT 233 (324)
T ss_pred HHHHCCCeEEEEe----cCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHhhcCCcE
Confidence 9999999999998 57778888888999999988764 3467888888876 9999999999877999999999999
Q ss_pred eC
Q 023007 287 QW 288 (288)
Q Consensus 287 ~v 288 (288)
|+
T Consensus 234 ~v 235 (324)
T cd08292 234 LV 235 (324)
T ss_pred EE
Confidence 85
No 17
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=6e-36 Score=266.32 Aligned_cols=234 Identities=30% Similarity=0.456 Sum_probs=201.6
Q ss_pred ceEEEEccCCCCC--cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~--~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||++++.+++.+. +.+++++.|.|.+.++||+||+.++++|++|+..+.|.++....+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 6899999887541 23788889999999999999999999999999998887654445688999999999999999999
Q ss_pred C-CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe-CCCChHHH
Q 023007 126 R-LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQ 203 (288)
Q Consensus 126 ~-~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-g~~g~vG~ 203 (288)
+ |++||+|++.....|+|++|++++.+.++++|+++++.+++.+++.++|||..+ ..... ++++++|+ +++|++|+
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~ 158 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR 158 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence 6 999999998753248999999999999999999999999998888899998554 44555 55667666 78899999
Q ss_pred HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282 (288)
Q Consensus 204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~ 282 (288)
+++|+|+.+|+++++++ .++++.+.++++|++++++++.. ..+.+.+++.+.+ +|++|||+|+......+++++
T Consensus 159 ~a~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~-~d~vid~~g~~~~~~~~~~l~ 233 (324)
T cd08291 159 MLVRLCKADGIKVINIV----RRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLN-ATIFFDAVGGGLTGQILLAMP 233 (324)
T ss_pred HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCC-CcEEEECCCcHHHHHHHHhhC
Confidence 99999999999999888 57889999999999999998764 4567888887766 999999999988888899999
Q ss_pred CCCeeC
Q 023007 283 FREEQW 288 (288)
Q Consensus 283 ~~G~~v 288 (288)
++|+++
T Consensus 234 ~~G~~v 239 (324)
T cd08291 234 YGSTLY 239 (324)
T ss_pred CCCEEE
Confidence 999975
No 18
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.2e-36 Score=272.02 Aligned_cols=230 Identities=22% Similarity=0.268 Sum_probs=199.3
Q ss_pred CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (288)
Q Consensus 45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~ 124 (288)
...||++++.++++. +++++.|.|.+.++||+|||.++++|++|.+.+.+.. .+|.++|||++|+|+++|+++
T Consensus 10 ~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v 82 (378)
T PLN02827 10 VITCRAAVAWGAGEA---LVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGV 82 (378)
T ss_pred cceeEEEEEecCCCC---ceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCC
Confidence 346899999887643 7889999999999999999999999999999887642 347899999999999999999
Q ss_pred CCCCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEc
Q 023007 125 TRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKV 157 (288)
Q Consensus 125 ~~~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~i 157 (288)
++|++||+|++.+. ..|+|+||+.++...++++
T Consensus 83 ~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~i 162 (378)
T PLN02827 83 TEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
T ss_pred cccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEEC
Confidence 99999999998642 0279999999999999999
Q ss_pred CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhC
Q 023007 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGL 236 (288)
Q Consensus 158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~ 236 (288)
|+++++++++.+++++.++|+++.+.+++++|++|+|+|+ |++|++++|+|+.+|++ ++++. .++++.+.++++
T Consensus 163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~----~~~~~~~~a~~l 237 (378)
T PLN02827 163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD----INPEKAEKAKTF 237 (378)
T ss_pred CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHHc
Confidence 9999999999998888899988877788999999999997 99999999999999996 55544 478899999999
Q ss_pred CCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007 237 GADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW 288 (288)
Q Consensus 237 g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v 288 (288)
|+++++++++ ...+.+.+++++ + +|++|||+|... +..++++++++ |++|
T Consensus 238 Ga~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~l~~l~~g~G~iv 292 (378)
T PLN02827 238 GVTDFINPNDLSEPIQQVIKRMTGG-G-ADYSFECVGDTGIATTALQSCSDGWGLTV 292 (378)
T ss_pred CCcEEEcccccchHHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhccCCCEEE
Confidence 9999998875 233567777776 4 999999999864 59999999998 9985
No 19
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=8.5e-36 Score=267.46 Aligned_cols=226 Identities=17% Similarity=0.175 Sum_probs=187.4
Q ss_pred ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHh-CCCCC-CCCCCcccccceEEEEEEecCC
Q 023007 46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSA 123 (288)
Q Consensus 46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~G~~ 123 (288)
..++++++++++. +++++.+.| +.++||+|||.++++|++|++.+. |..+. ...+|.++|||++|+|+++ +
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~ 75 (343)
T PRK09880 3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--D 75 (343)
T ss_pred ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--c
Confidence 3578999998776 889999887 689999999999999999999875 33221 1256899999999999999 7
Q ss_pred CCCCCCCCEEEecC-------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccc
Q 023007 124 VTRLAPGDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN 172 (288)
Q Consensus 124 ~~~~~~Gd~V~~~~-------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~ 172 (288)
+++|++||+|+..+ ...|+|+||++++++.++++|+++++++++ +..+
T Consensus 76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~ 154 (343)
T PRK09880 76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEP 154 (343)
T ss_pred CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcH
Confidence 88999999998642 125899999999999999999999987655 4457
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHH
Q 023007 173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN 251 (288)
Q Consensus 173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 251 (288)
+.+||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ ++++. .++++++.++++|+++++++++.....
T Consensus 155 ~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~ 228 (343)
T PRK09880 155 LAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCAD----VSPRSLSLAREMGADKLVNPQNDDLDH 228 (343)
T ss_pred HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEe----CCHHHHHHHHHcCCcEEecCCcccHHH
Confidence 8899999976 55668999999997 99999999999999994 66666 578999999999999999987655443
Q ss_pred HHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 252 VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 252 i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+... .+++|++|||+|++. .+.++++++++|+++
T Consensus 229 ~~~~---~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv 263 (343)
T PRK09880 229 YKAE---KGYFDVSFEVSGHPSSINTCLEVTRAKGVMV 263 (343)
T ss_pred Hhcc---CCCCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 3322 224999999999865 489999999999985
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1e-35 Score=268.48 Aligned_cols=231 Identities=19% Similarity=0.284 Sum_probs=192.6
Q ss_pred CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007 45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV 124 (288)
Q Consensus 45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~ 124 (288)
|.+++++......+. +++.+++.|.+.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 10 ~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v 85 (360)
T PLN02586 10 PQKAFGWAARDPSGV---LSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNV 85 (360)
T ss_pred hhheeEEEecCCCCC---ceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCC
Confidence 445566666655442 778888889999999999999999999999998876543 2568999999999999999999
Q ss_pred CCCCCCCEEEecCC----------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007 125 TRLAPGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (288)
Q Consensus 125 ~~~~~Gd~V~~~~~----------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~ 170 (288)
++|++||+|+..+. ..|+|+||+++|.+.++++|+++++++++.++
T Consensus 86 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~ 165 (360)
T PLN02586 86 KKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLL 165 (360)
T ss_pred CccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhh
Confidence 99999999974210 14899999999999999999999999999999
Q ss_pred cchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHH
Q 023007 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250 (288)
Q Consensus 171 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 250 (288)
+.+.|+|+++.....+++|++|+|.|+ |++|++++|+|+.+|+++++++.. .+++.+.++++|+++++++++. +
T Consensus 166 ~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~---~~~~~~~~~~~Ga~~vi~~~~~--~ 239 (360)
T PLN02586 166 CAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSS---SNKEDEAINRLGADSFLVSTDP--E 239 (360)
T ss_pred cchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC---cchhhhHHHhCCCcEEEcCCCH--H
Confidence 999999999987677889999999887 999999999999999998887632 3344556688999999987653 3
Q ss_pred HHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 251 ~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
.+.+.++ ++|++|||+|+.. ++.++++++++|+++
T Consensus 240 ~~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv 275 (360)
T PLN02586 240 KMKAAIG---TMDYIIDTVSAVHALGPLLGLLKVNGKLI 275 (360)
T ss_pred HHHhhcC---CCCEEEECCCCHHHHHHHHHHhcCCcEEE
Confidence 4555553 3999999999864 588999999999985
No 21
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.7e-35 Score=267.70 Aligned_cols=230 Identities=27% Similarity=0.355 Sum_probs=200.7
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
.||++++.+.+.. ++++++|.|.+.++||+||+.++++|++|.+.+.|..+ ..+|.++|||++|+|+++|+++++
T Consensus 2 ~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08277 2 KCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTN 76 (365)
T ss_pred ccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCcc
Confidence 5789999887653 78999999999999999999999999999999888654 356889999999999999999999
Q ss_pred CCCCCEEEecCC----------------------------------------------CCcccceEEEeeCCcEEEcCCC
Q 023007 127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD 160 (288)
Q Consensus 127 ~~~Gd~V~~~~~----------------------------------------------~~G~~a~~~~~~~~~l~~ip~~ 160 (288)
+++||+|++.+. ..|+|+||+.++.+.++++|++
T Consensus 77 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~ 156 (365)
T cd08277 77 LKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPA 156 (365)
T ss_pred CCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCC
Confidence 999999987521 1378999999999999999999
Q ss_pred CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD 239 (288)
Q Consensus 161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~ 239 (288)
+++++++.+++++.|||+++...+++++|++|+|+|+ |++|++++++|+.+|+ +|+++. .++++++.++++|++
T Consensus 157 l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~~~~~ga~ 231 (365)
T cd08277 157 APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD----INEDKFEKAKEFGAT 231 (365)
T ss_pred CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCC
Confidence 9999999999999999999877789999999999986 9999999999999999 577776 578899999999999
Q ss_pred EEEeCCcc---cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCC-CeeC
Q 023007 240 EVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR-EEQW 288 (288)
Q Consensus 240 ~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~-G~~v 288 (288)
+++++++. ..+.+.+++++ ++|++|||+|+... ..++++++++ |++|
T Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~~G~~v 283 (365)
T cd08277 232 DFINPKDSDKPVSEVIREMTGG--GVDYSFECTGNADLMNEALESTKLGWGVSV 283 (365)
T ss_pred cEeccccccchHHHHHHHHhCC--CCCEEEECCCChHHHHHHHHhcccCCCEEE
Confidence 99987653 24567777763 49999999997554 8899999885 9875
No 22
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.3e-35 Score=268.63 Aligned_cols=230 Identities=18% Similarity=0.175 Sum_probs=190.7
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCC-------CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEE
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVK-------ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYS 119 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~-------~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 119 (288)
-||++++.+++. +++++.|.|+++ ++||+|||.+++||++|++.+.|.++. ..|.++|||++|+|++
T Consensus 2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~ 75 (393)
T TIGR02819 2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIE 75 (393)
T ss_pred CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEE
Confidence 479999988775 888999988864 689999999999999999999876432 4589999999999999
Q ss_pred ecCCCCCCCCCCEEEecCC------------------------------------CCcccceEEEeeCC--cEEEcCCCC
Q 023007 120 VGSAVTRLAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDS 161 (288)
Q Consensus 120 ~G~~~~~~~~Gd~V~~~~~------------------------------------~~G~~a~~~~~~~~--~l~~ip~~~ 161 (288)
+|+++++|++||||+..+. ..|+|+||+.+|.. .++++|+++
T Consensus 76 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~ 155 (393)
T TIGR02819 76 KGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRD 155 (393)
T ss_pred EcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcc
Confidence 9999999999999976320 14899999999964 699999987
Q ss_pred Ch----hhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC
Q 023007 162 PM----EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG 237 (288)
Q Consensus 162 ~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g 237 (288)
+. ..++.+..++.++|+++.. .++++|++|+|.|+ |++|++++|+|+.+|++++++++ .++++++.++++|
T Consensus 156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d---~~~~r~~~a~~~G 230 (393)
T TIGR02819 156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGD---LNPARLAQARSFG 230 (393)
T ss_pred cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHcC
Confidence 53 3466777788999999865 78999999999776 99999999999999998776653 4678999999999
Q ss_pred CCEEEeCCc-ccHHHHHHHhcCCCCccEEEECCCcc---------------cHHHHHhhccCCCeeC
Q 023007 238 ADEVFTESQ-LEVKNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLRFREEQW 288 (288)
Q Consensus 238 ~~~v~~~~~-~~~~~i~~~~~~~g~~D~v~d~~g~~---------------~~~~a~~~l~~~G~~v 288 (288)
++.+.+.+. ...+.+.+++++.+ +|++|||+|.+ .++.++++++++|+++
T Consensus 231 a~~v~~~~~~~~~~~v~~~~~~~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~ 296 (393)
T TIGR02819 231 CETVDLSKDATLPEQIEQILGEPE-VDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIG 296 (393)
T ss_pred CeEEecCCcccHHHHHHHHcCCCC-CcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEE
Confidence 975443333 33456777777765 99999999986 4599999999999985
No 23
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=4.1e-35 Score=262.50 Aligned_cols=239 Identities=49% Similarity=0.783 Sum_probs=208.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCC-CeEEEEEeEEecChHHHHHHhCCCCCCCC----CCcccccceEEEEEEecC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK----VPAVGGYEGVGEVYSVGS 122 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~-~evlI~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~~G~ 122 (288)
||++++.+.+.+.+.+.+++.|.|++.+ ++|+||+.++++|+.|...+.|..+.... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 7899999988765568999999998887 99999999999999999988876543222 567899999999999999
Q ss_pred CCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHH
Q 023007 123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202 (288)
Q Consensus 123 ~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG 202 (288)
++.+|++||+|++.....|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.....+++|++|+|+|++|.+|
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg 160 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG 160 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence 99999999999988644589999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc----cHHHHHHHhcCCCCccEEEECCCcccHHHHH
Q 023007 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGLLANLPEPALGFNCVGGNSASKVL 278 (288)
Q Consensus 203 ~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~ 278 (288)
++++++|+.+|++++++++.....+++.+.++++|++++++++.. ..+.+..++++ + +|++|||+|+.....++
T Consensus 161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~-~d~vld~~g~~~~~~~~ 238 (341)
T cd08290 161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-R-PKLALNCVGGKSATELA 238 (341)
T ss_pred HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-C-ceEEEECcCcHhHHHHH
Confidence 999999999999999998532111267788889999999988763 34566667766 4 99999999998888899
Q ss_pred hhccCCCeeC
Q 023007 279 KFLRFREEQW 288 (288)
Q Consensus 279 ~~l~~~G~~v 288 (288)
++++++|+|+
T Consensus 239 ~~l~~~G~~v 248 (341)
T cd08290 239 RLLSPGGTMV 248 (341)
T ss_pred HHhCCCCEEE
Confidence 9999999985
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.6e-34 Score=261.72 Aligned_cols=229 Identities=22% Similarity=0.328 Sum_probs=189.1
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|+..+...+.+. .+...+++.|.+.++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|+++++|+
T Consensus 6 ~a~~~~~~~~~~-~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~ 83 (375)
T PLN02178 6 KAFGWAANDESG-VLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFK 83 (375)
T ss_pred eeEEEEEccCCC-CceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccC
Confidence 444444333322 2777888888999999999999999999999998876532 24688999999999999999999999
Q ss_pred CCCEEEecCC----------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007 129 PGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174 (288)
Q Consensus 129 ~Gd~V~~~~~----------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ 174 (288)
+||+|+..+. ..|+|+||+.++++.++++|+++++++++.+++.+.
T Consensus 84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 163 (375)
T PLN02178 84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163 (375)
T ss_pred CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence 9999974210 148999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHH
Q 023007 175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 253 (288)
Q Consensus 175 ta~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~ 253 (288)
|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++++++... .+++.+.++++|+++++++++. +.+.
T Consensus 164 ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~---~~~~~~~a~~lGa~~~i~~~~~--~~v~ 237 (375)
T PLN02178 164 TVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS---SEKEREAIDRLGADSFLVTTDS--QKMK 237 (375)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC---hHHhHHHHHhCCCcEEEcCcCH--HHHH
Confidence 99999876443 368999999987 999999999999999998888731 3445778889999999987653 4555
Q ss_pred HHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 254 GLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 254 ~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+.++ + +|++|||+|... .+.++++++++|+++
T Consensus 238 ~~~~--~-~D~vid~~G~~~~~~~~~~~l~~~G~iv 270 (375)
T PLN02178 238 EAVG--T-MDFIIDTVSAEHALLPLFSLLKVSGKLV 270 (375)
T ss_pred HhhC--C-CcEEEECCCcHHHHHHHHHhhcCCCEEE
Confidence 6553 3 999999999875 599999999999985
No 25
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.6e-34 Score=259.14 Aligned_cols=219 Identities=23% Similarity=0.236 Sum_probs=184.1
Q ss_pred cceEEEEcCCCCCC-CCeEEEEEeEEecChHHHHHHhCCC--CCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecC
Q 023007 61 SVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP 137 (288)
Q Consensus 61 ~~~~~~~~~~p~~~-~~evlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~ 137 (288)
+.+++++.+.|++. ++||+|||.++++|+.|+....... .....+|.++|||++|+|+++|+++++|++||+|+++.
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 55889999999874 9999999999999999964332111 11124578899999999999999999999999998753
Q ss_pred CCCcccceEEEeeCCcEEEcCCCCChhh----hcccccchHHHHHHHHhhcCCCCC--CeEEEeCCCChHHHHHHHHHHH
Q 023007 138 PSSGTWQSYVVKDQSVWHKVSKDSPMEY----AATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARH 211 (288)
Q Consensus 138 ~~~G~~a~~~~~~~~~l~~ip~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~g~~g~vG~~a~~la~~ 211 (288)
+.|++|++++++.++++|+++++.+ +++++.+++|||+++.+.+++++| ++|||+|++|++|++++|+|++
T Consensus 101 ---~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~ 177 (345)
T cd08293 101 ---WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL 177 (345)
T ss_pred ---CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 5899999999999999999854322 456777899999999888888877 9999999999999999999999
Q ss_pred cCC-eEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 212 RGI-HSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 212 ~g~-~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+|+ +|++++ .++++.+++++ +|+++++++++.. .+.++++++ .| +|++|||+|+.....++++|+++|+++
T Consensus 178 ~G~~~Vi~~~----~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~g-vd~vid~~g~~~~~~~~~~l~~~G~iv 251 (345)
T cd08293 178 LGCSRVVGIC----GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EG-VDVYFDNVGGEISDTVISQMNENSHII 251 (345)
T ss_pred cCCCEEEEEc----CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CC-ceEEEECCCcHHHHHHHHHhccCCEEE
Confidence 999 799888 57888888876 9999999987643 466777765 34 999999999987899999999999985
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.4e-34 Score=257.98 Aligned_cols=221 Identities=19% Similarity=0.167 Sum_probs=189.6
Q ss_pred EEEccCCCCC-cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCC
Q 023007 51 VVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAP 129 (288)
Q Consensus 51 ~~~~~~g~~~-~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 129 (288)
+.+.++|.+. ..+++++.|.|++.++||+||+.++++|++|.+.+.|.++.. ..|.++|||++|+|+++|+++++|++
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccCC
Confidence 4555565542 458999999999999999999999999999999998865432 34689999999999999999999999
Q ss_pred CCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh
Q 023007 130 GDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED 182 (288)
Q Consensus 130 Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~ 182 (288)
||+|+..+. ..|+|+||+.++...++++|+++++.+++.+++++.|||+++..
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~ 160 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR 160 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence 999975210 14899999999999999999999999999999999999999964
Q ss_pred hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP 262 (288)
Q Consensus 183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~ 262 (288)
+++++|++|+|+|+ |++|++++|+|+.+|+++++++ .+++++++++++|+++++++.+.. .. ++
T Consensus 161 -~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~----~~~~~~~~a~~~Ga~~vi~~~~~~---------~~-~~ 224 (329)
T TIGR02822 161 -ASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMT----RGAAARRLALALGAASAGGAYDTP---------PE-PL 224 (329)
T ss_pred -cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHhCCceeccccccC---------cc-cc
Confidence 88999999999998 9999999999999999998887 578899999999999998854321 12 38
Q ss_pred cEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 263 ALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 263 D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
|+++++.+.... +.++++++++|+++
T Consensus 225 d~~i~~~~~~~~~~~~~~~l~~~G~~v 251 (329)
T TIGR02822 225 DAAILFAPAGGLVPPALEALDRGGVLA 251 (329)
T ss_pred eEEEECCCcHHHHHHHHHhhCCCcEEE
Confidence 999998876554 99999999999985
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3e-34 Score=257.76 Aligned_cols=227 Identities=26% Similarity=0.301 Sum_probs=191.7
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++++++++. +++++.|.|++ .++||+|||.++++|++|...+..... ...|.++|||++|+|+++|+++++
T Consensus 1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 74 (347)
T PRK10309 1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDD 74 (347)
T ss_pred CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCC
Confidence 68999988764 88999999987 589999999999999999875432211 134789999999999999999999
Q ss_pred CCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 127 LAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 127 ~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
|++||+|++.+. ..|+|++|+.++.+.++++|+++++++++.+. ++.++|+++
T Consensus 75 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~ 153 (347)
T PRK10309 75 LHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF 153 (347)
T ss_pred CCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH
Confidence 999999998641 15899999999999999999999999998874 456678876
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~ 259 (288)
+...+++|++|+|+|+ |++|++++|+|+.+|++ ++++. .++++.+.++++|++++++++....+.+.+++.+.
T Consensus 154 -~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 227 (347)
T PRK10309 154 -HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAID----INSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227 (347)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence 4578899999999986 99999999999999998 45555 57889999999999999988765556677777765
Q ss_pred CCcc-EEEECCCcccH-HHHHhhccCCCeeC
Q 023007 260 PEPA-LGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D-~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+ +| ++|||+|+... ..++++++++|+++
T Consensus 228 ~-~d~~v~d~~G~~~~~~~~~~~l~~~G~iv 257 (347)
T PRK10309 228 R-FDQLILETAGVPQTVELAIEIAGPRAQLA 257 (347)
T ss_pred C-CCeEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 5 88 99999998654 99999999999985
No 28
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.4e-34 Score=256.95 Aligned_cols=232 Identities=24% Similarity=0.318 Sum_probs=200.1
Q ss_pred eEEEEccC---CCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007 49 KAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 49 ~a~~~~~~---g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
|++++.++ +.+ +.++..+.|.|++.++||+||+.++++|+.|...+.+..+. ...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~ 78 (336)
T TIGR02817 1 KAVGYKKPLPITDP-DALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVT 78 (336)
T ss_pred CceeeccccCCCCc-ccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCC
Confidence 56777776 444 44888899999999999999999999999999888775433 24578899999999999999999
Q ss_pred CCCCCCEEEecC--CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC-----CCeEEEeCCC
Q 023007 126 RLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT 198 (288)
Q Consensus 126 ~~~~Gd~V~~~~--~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~g~~ 198 (288)
+|++||+|+++. ...|+|++|+.++.+.++++|+++++.+++.++++++|||+++....++++ |++|+|+|++
T Consensus 79 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~ 158 (336)
T TIGR02817 79 LFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGA 158 (336)
T ss_pred CCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCC
Confidence 999999999874 225899999999999999999999999999999999999999988888887 9999999999
Q ss_pred ChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc-ccHHH
Q 023007 199 SIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK 276 (288)
Q Consensus 199 g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~ 276 (288)
|++|++++|+|+.+ |+++++++ .++++.+.++++|+++++++.....+.+.++ .+.+ +|+++||+++ .....
T Consensus 159 g~vg~~~~~~ak~~~G~~vi~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~-vd~vl~~~~~~~~~~~ 232 (336)
T TIGR02817 159 GGVGSILIQLARQLTGLTVIATA----SRPESQEWVLELGAHHVIDHSKPLKAQLEKL-GLEA-VSYVFSLTHTDQHFKE 232 (336)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEc----CcHHHHHHHHHcCCCEEEECCCCHHHHHHHh-cCCC-CCEEEEcCCcHHHHHH
Confidence 99999999999998 99999998 5788889999999999998655444566664 3334 9999999865 45599
Q ss_pred HHhhccCCCeeC
Q 023007 277 VLKFLRFREEQW 288 (288)
Q Consensus 277 a~~~l~~~G~~v 288 (288)
++++++++|+|+
T Consensus 233 ~~~~l~~~G~~v 244 (336)
T TIGR02817 233 IVELLAPQGRFA 244 (336)
T ss_pred HHHHhccCCEEE
Confidence 999999999985
No 29
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=4.1e-34 Score=258.18 Aligned_cols=230 Identities=26% Similarity=0.328 Sum_probs=200.7
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC--
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR-- 126 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~-- 126 (288)
|++++.++++ .+++++.+.|.+.++||+||+.++++|+.|...+.|.++. ...|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (361)
T cd08231 2 RAAVLTGPGK---PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDV 77 (361)
T ss_pred eEEEEcCCCC---CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCccccc
Confidence 7889998874 2899999999999999999999999999999998887653 356889999999999999999986
Q ss_pred ----CCCCCEEEecCC---------------------------------CCcccceEEEeeCC-cEEEcCCCCChhhhcc
Q 023007 127 ----LAPGDWVIPSPP---------------------------------SSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT 168 (288)
Q Consensus 127 ----~~~Gd~V~~~~~---------------------------------~~G~~a~~~~~~~~-~l~~ip~~~~~~~aa~ 168 (288)
|++||+|++.+. ..|+|++|+.++++ .++++|+++++.+++.
T Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~ 157 (361)
T cd08231 78 AGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP 157 (361)
T ss_pred cCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHH
Confidence 999999998731 24899999999986 7999999999999999
Q ss_pred cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc
Q 023007 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 247 (288)
Q Consensus 169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~ 247 (288)
++++++|||+++......++|++|||+|+ |++|++++++|+.+|+ +++++. .++++.++++++|++.+++++..
T Consensus 158 ~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~ 232 (361)
T cd08231 158 ANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVID----GSPERLELAREFGADATIDIDEL 232 (361)
T ss_pred hcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCCeEEcCccc
Confidence 98999999999988777779999999985 9999999999999999 888887 57888899999999999887654
Q ss_pred cH----HHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 248 EV----KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 248 ~~----~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
.. ..+.+++++.+ +|++|||+|+.. ...++++++++|+|+
T Consensus 233 ~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v 277 (361)
T cd08231 233 PDPQRRAIVRDITGGRG-ADVVIEASGHPAAVPEGLELLRRGGTYV 277 (361)
T ss_pred ccHHHHHHHHHHhCCCC-CcEEEECCCChHHHHHHHHHhccCCEEE
Confidence 21 36777787766 999999998754 589999999999985
No 30
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.2e-34 Score=258.89 Aligned_cols=227 Identities=22% Similarity=0.241 Sum_probs=194.2
Q ss_pred EEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCC
Q 023007 51 VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPG 130 (288)
Q Consensus 51 ~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G 130 (288)
+++++++.+ +++++.|.|.+.++||+|||.++++|++|++.+.+.......+|.++|||++|+|+++|++++++ +|
T Consensus 2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~G 77 (349)
T TIGR03201 2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IG 77 (349)
T ss_pred ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CC
Confidence 455666653 78889999999999999999999999999988754433223568899999999999999999887 99
Q ss_pred CEEEecCC--------------------------CCcccceEEEeeCCcEEEcCC------CCChhhhcccccchHHHHH
Q 023007 131 DWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSK------DSPMEYAATIIVNPLTALR 178 (288)
Q Consensus 131 d~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~------~~~~~~aa~l~~~~~ta~~ 178 (288)
|+|+..+. ..|+|+||+.++.+.++++|+ ++++++++.++.++.++|+
T Consensus 78 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~ 157 (349)
T TIGR03201 78 KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ 157 (349)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence 99987320 258999999999999999999 8999999999999999999
Q ss_pred HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc----cHHHHHH
Q 023007 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKG 254 (288)
Q Consensus 179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~i~~ 254 (288)
++.. .++++|++|+|+|+ |++|++++|+|+.+|++++++. .+++++++++++|+++++++++. ..+.+.+
T Consensus 158 a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~ 231 (349)
T TIGR03201 158 AAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAID----IDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKA 231 (349)
T ss_pred HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHhCCceEecCccccHHHHHHHHHh
Confidence 9875 78999999999999 9999999999999999988877 57889999999999999987653 2356777
Q ss_pred HhcCCCCcc----EEEECCCcccH-HHHHhhccCCCeeC
Q 023007 255 LLANLPEPA----LGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D----~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
++++.| +| ++|||+|+... +.++++++++|+++
T Consensus 232 ~t~~~g-~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv 269 (349)
T TIGR03201 232 FAKARG-LRSTGWKIFECSGSKPGQESALSLLSHGGTLV 269 (349)
T ss_pred hcccCC-CCCCcCEEEECCCChHHHHHHHHHHhcCCeEE
Confidence 888766 76 89999998765 78999999999975
No 31
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.4e-34 Score=259.19 Aligned_cols=228 Identities=23% Similarity=0.267 Sum_probs=181.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCC--CCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||++++...+. + ++++++|.|++.++||+|||.++++|++|++.+.|.++..+ ..|.++|||++|+|+++|++ +
T Consensus 1 mka~~~~~~~~-~--l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~ 76 (355)
T cd08230 1 MKAIAVKPGKP-G--VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76 (355)
T ss_pred CceeEecCCCC-C--CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence 68888885432 2 88999999999999999999999999999999988654322 35789999999999999999 9
Q ss_pred CCCCCCEEEecCC-----------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHH
Q 023007 126 RLAPGDWVIPSPP-----------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 176 (288)
Q Consensus 126 ~~~~Gd~V~~~~~-----------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta 176 (288)
+|++||+|+..+. ..|+|+||+.++.+.++++|++++ +++.+..++.++
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~ 154 (355)
T cd08230 77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV 154 (355)
T ss_pred CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence 9999999987531 148899999999999999999999 344444466665
Q ss_pred HHHHHhh------cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHH
Q 023007 177 LRMLEDF------TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250 (288)
Q Consensus 177 ~~~l~~~------~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 250 (288)
+.++... ..+++|++|+|+|+ |++|++++|+|+.+|++++++.+.+ .++++++.++++|++. +++.+....
T Consensus 155 ~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~Ga~~-v~~~~~~~~ 231 (355)
T cd08230 155 EKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEELGATY-VNSSKTPVA 231 (355)
T ss_pred HHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE-ecCCccchh
Confidence 5544322 23678999999997 9999999999999999988887321 1578899999999987 455544332
Q ss_pred HHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 251 ~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
. ... .. ++|+||||+|++. ++.++++++++|+++
T Consensus 232 ~-~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v 266 (355)
T cd08230 232 E-VKL--VG-EFDLIIEATGVPPLAFEALPALAPNGVVI 266 (355)
T ss_pred h-hhh--cC-CCCEEEECcCCHHHHHHHHHHccCCcEEE
Confidence 2 111 22 4999999999865 599999999999975
No 32
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=6.7e-34 Score=255.88 Aligned_cols=229 Identities=27% Similarity=0.331 Sum_probs=195.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC-C---------CCCCCcccccceEEEE
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP-V---------RPKVPAVGGYEGVGEV 117 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~-~---------~~~~p~~~G~e~~G~V 117 (288)
||++++.+++. +++++.+.|++.++||+||+.++++|+.|...+.+... . ....|.++|||++|+|
T Consensus 1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V 76 (351)
T cd08233 1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV 76 (351)
T ss_pred CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence 68999987654 88999999999999999999999999999887654311 0 1135789999999999
Q ss_pred EEecCCCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007 118 YSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (288)
Q Consensus 118 ~~~G~~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~ 170 (288)
+++|+++++|++||+|++.+. ..|+|++|+.++.+.++++|+++++.+++.+
T Consensus 77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~- 155 (351)
T cd08233 77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV- 155 (351)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence 999999999999999997321 1489999999999999999999999998776
Q ss_pred cchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-
Q 023007 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE- 248 (288)
Q Consensus 171 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~- 248 (288)
.++.+||+++ ...++++|++|+|+|+ |.+|++++|+|+.+|+ +++++. .++++.++++++|++.++++++..
T Consensus 156 ~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~----~~~~~~~~~~~~ga~~~i~~~~~~~ 229 (351)
T cd08233 156 EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSE----PSEARRELAEELGATIVLDPTEVDV 229 (351)
T ss_pred cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCccCH
Confidence 5788999998 5688999999999986 9999999999999999 677776 578888899999999999987653
Q ss_pred HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 249 VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 249 ~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
.+.+.+++++.+ +|++|||+|+. .++.++++++++|+++
T Consensus 230 ~~~l~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v 269 (351)
T cd08233 230 VAEVRKLTGGGG-VDVSFDCAGVQATLDTAIDALRPRGTAV 269 (351)
T ss_pred HHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHhccCCCEEE
Confidence 467777887755 99999999965 4589999999999985
No 33
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.1e-34 Score=256.75 Aligned_cols=228 Identities=25% Similarity=0.273 Sum_probs=193.8
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
.+++++++++++. +++++++.|.+.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 9 ~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~ 84 (357)
T PLN02514 9 KTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSK 84 (357)
T ss_pred eEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCccc
Confidence 4799999999875 788899999999999999999999999999988876533 245889999999999999999999
Q ss_pred CCCCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccc
Q 023007 127 LAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN 172 (288)
Q Consensus 127 ~~~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~ 172 (288)
|++||+|+..+ ...|+|+||++++...++++|+++++.+++.++++
T Consensus 85 ~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~ 164 (357)
T PLN02514 85 FTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCA 164 (357)
T ss_pred ccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhh
Confidence 99999997421 01489999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHH
Q 023007 173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKN 251 (288)
Q Consensus 173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~ 251 (288)
+.|||+++......++|++|+|+|+ |++|++++|+|+.+|+++++++ .++++++ .++++|+++++++.+. +.
T Consensus 165 ~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~----~~~~~~~~~~~~~Ga~~~i~~~~~--~~ 237 (357)
T PLN02514 165 GVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVIS----SSDKKREEALEHLGADDYLVSSDA--AE 237 (357)
T ss_pred HHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHhcCCcEEecCCCh--HH
Confidence 9999999987677789999999976 9999999999999999998887 3555554 4467999988776442 34
Q ss_pred HHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 252 VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 252 i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+.+.+. + +|++|||+|... .+.++++++++|+++
T Consensus 238 ~~~~~~--~-~D~vid~~g~~~~~~~~~~~l~~~G~iv 272 (357)
T PLN02514 238 MQEAAD--S-LDYIIDTVPVFHPLEPYLSLLKLDGKLI 272 (357)
T ss_pred HHHhcC--C-CcEEEECCCchHHHHHHHHHhccCCEEE
Confidence 555543 3 999999999754 589999999999985
No 34
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=5.4e-34 Score=255.25 Aligned_cols=229 Identities=24% Similarity=0.243 Sum_probs=190.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCC----CCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccce--EEEEEEec
Q 023007 48 SKAVVYEREGPPDSVIKMIELPP----VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEG--VGEVYSVG 121 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~----p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~~G 121 (288)
+|+|....++ .+.+++++.+. |++.++||||||.++++|+.|++.+.|........|.++|++. .|++..+|
T Consensus 8 ~~~~~~~~~~--~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~ 85 (338)
T cd08295 8 LKAYVTGFPK--ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD 85 (338)
T ss_pred EecCCCCCCC--ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence 3555533333 44589999877 7899999999999999999999988875432124577888754 45555577
Q ss_pred CCCCCCCCCCEEEecCCCCcccceEEEeeC-CcEEEcC-CCCChh-hhcccccchHHHHHHHHhhcCCCCCCeEEEeCCC
Q 023007 122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVS-KDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 198 (288)
Q Consensus 122 ~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~-~~l~~ip-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 198 (288)
+++++|++||+|+++ |+|+||++++. ..++++| +++++. +++.++++++|||+++.+.+++++|++|+|+|++
T Consensus 86 ~~v~~~~vGd~V~~~----g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~ 161 (338)
T cd08295 86 SGNPDFKVGDLVWGF----TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS 161 (338)
T ss_pred cCCCCCCCCCEEEec----CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 888899999999865 68999999999 7999995 678887 7999999999999999888999999999999999
Q ss_pred ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCc--ccHHHHHHHhcCCCCccEEEECCCcccHH
Q 023007 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSAS 275 (288)
Q Consensus 199 g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~g~~~~~ 275 (288)
|++|++++|+|+.+|+++++++ .++++.+++++ +|+++++++.. ...+.+.++++ .+ +|++|||+|+....
T Consensus 162 G~vG~~aiqlAk~~G~~Vi~~~----~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~g-vd~v~d~~g~~~~~ 235 (338)
T cd08295 162 GAVGQLVGQLAKLKGCYVVGSA----GSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NG-IDIYFDNVGGKMLD 235 (338)
T ss_pred cHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CC-cEEEEECCCHHHHH
Confidence 9999999999999999999888 57889999988 99999999653 33455666665 34 99999999997779
Q ss_pred HHHhhccCCCeeC
Q 023007 276 KVLKFLRFREEQW 288 (288)
Q Consensus 276 ~a~~~l~~~G~~v 288 (288)
.++++++++|+|+
T Consensus 236 ~~~~~l~~~G~iv 248 (338)
T cd08295 236 AVLLNMNLHGRIA 248 (338)
T ss_pred HHHHHhccCcEEE
Confidence 9999999999985
No 35
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=6.7e-34 Score=259.65 Aligned_cols=240 Identities=23% Similarity=0.319 Sum_probs=204.5
Q ss_pred CCccceEEEEc--cCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCC---------CCCCcccccc
Q 023007 44 MSPPSKAVVYE--REGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR---------PKVPAVGGYE 112 (288)
Q Consensus 44 ~~~~~~a~~~~--~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e 112 (288)
.|.+|+++++. +.+++.+.+++++.|.|.+.++||+|++.++++|++|.....+..... ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 57789999885 344444458899999999999999999999999999998876641100 0112478999
Q ss_pred eEEEEEEecCCCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhh
Q 023007 113 GVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEY 165 (288)
Q Consensus 113 ~~G~V~~~G~~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~ 165 (288)
++|+|+++|++++++++||+|++.+. ..|+|++|++++...++++|+++++.+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999998752 248999999999999999999999999
Q ss_pred hcccccchHHHHHHHHhh--cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007 166 AATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT 243 (288)
Q Consensus 166 aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~ 243 (288)
++.++.++.|||+++... +++++|++|+|+|++|++|++++++|+.+|+++++++ .++++.+.++++|++++++
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~----~s~~~~~~~~~~G~~~~i~ 244 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVV----SSEEKAEYCRALGAEGVIN 244 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCCEEEc
Confidence 999999999999998765 6789999999999999999999999999999998887 5788999999999999998
Q ss_pred CCcc-----------------------cHHHHHHHhcCC-CCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 244 ESQL-----------------------EVKNVKGLLANL-PEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 244 ~~~~-----------------------~~~~i~~~~~~~-g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+++. +.+.+.+++++. + +|++|||+|+.....++++++++|+|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g-~d~vid~~g~~~~~~~~~~l~~~G~~v 312 (393)
T cd08246 245 RRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGRED-PDIVFEHPGRATFPTSVFVCDRGGMVV 312 (393)
T ss_pred ccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCC-CeEEEECCchHhHHHHHHHhccCCEEE
Confidence 6432 235677788876 5 999999999877789999999999985
No 36
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=8e-34 Score=252.77 Aligned_cols=225 Identities=24% Similarity=0.260 Sum_probs=191.3
Q ss_pred cceEEEEccC--CC-CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007 47 PSKAVVYERE--GP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA 123 (288)
Q Consensus 47 ~~~a~~~~~~--g~-~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~ 123 (288)
+||+|++.++ +. +.+.+++++.+.|+++++||+|||.++++|+.|...... . ...|.++|+|++|+|++ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~ 74 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---K 74 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---C
Confidence 5899999993 44 336699999999999999999999999999987652111 1 13578999999999985 4
Q ss_pred CCCCCCCCEEEecCCCCcccceEEEeeCC---cEEEcCCCCC-----hhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007 124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQS---VWHKVSKDSP-----MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195 (288)
Q Consensus 124 ~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~---~l~~ip~~~~-----~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~ 195 (288)
+++|++||+|+++ ++|++|.+++.+ .++++|++++ ...+++++.+++|||+++.+.+++++|++|+|+
T Consensus 75 ~~~~~~Gd~V~~~----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ 150 (329)
T cd08294 75 NSKFPVGTIVVAS----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN 150 (329)
T ss_pred CCCCCCCCEEEee----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 5679999999975 478999999999 9999999998 223346788999999999888999999999999
Q ss_pred CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccH
Q 023007 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 196 g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
|++|++|++++|+|+.+|+++++++ .++++.++++++|+++++++++.. .+.+.++++ .+ +|++|||+|++..
T Consensus 151 ga~g~vG~~aiqlA~~~G~~vi~~~----~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~g-vd~vld~~g~~~~ 224 (329)
T cd08294 151 GAAGAVGSLVGQIAKIKGCKVIGCA----GSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DG-IDCYFDNVGGEFS 224 (329)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CC-cEEEEECCCHHHH
Confidence 9999999999999999999999888 688999999999999999987654 456777665 34 9999999999777
Q ss_pred HHHHhhccCCCeeC
Q 023007 275 SKVLKFLRFREEQW 288 (288)
Q Consensus 275 ~~a~~~l~~~G~~v 288 (288)
..++++++++|+|+
T Consensus 225 ~~~~~~l~~~G~iv 238 (329)
T cd08294 225 STVLSHMNDFGRVA 238 (329)
T ss_pred HHHHHhhccCCEEE
Confidence 99999999999985
No 37
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=8.5e-34 Score=252.60 Aligned_cols=211 Identities=22% Similarity=0.265 Sum_probs=181.3
Q ss_pred cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCC
Q 023007 61 SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS 140 (288)
Q Consensus 61 ~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 140 (288)
+++++.+.+.|++++|||+|||.++++|+.++. |.+... ..|.++|.|++|+|++.| ++|++||+|+++
T Consensus 17 ~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~---~~~~~GdrV~~~---- 85 (325)
T TIGR02825 17 SDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKN---VALPKGTIVLAS---- 85 (325)
T ss_pred CceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCC---CCCCCCCEEEEe----
Confidence 458899999999999999999999999997643 333221 236799999999999976 469999999975
Q ss_pred cccceEEEeeCCcEEEc----CCCCChhhh-cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe
Q 023007 141 GTWQSYVVKDQSVWHKV----SKDSPMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215 (288)
Q Consensus 141 G~~a~~~~~~~~~l~~i----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~ 215 (288)
++|++|++++.+.+.++ |++++++++ +++++++.|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~ 165 (325)
T TIGR02825 86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK 165 (325)
T ss_pred cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence 37899999999888877 899999987 6888899999999988899999999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 216 SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 216 vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+++++ .++++.++++++|+++++++++. +. +.+...++ .+ +|++|||+|++.+..++++++++|+||
T Consensus 166 Vi~~~----~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~-~g-vdvv~d~~G~~~~~~~~~~l~~~G~iv 234 (325)
T TIGR02825 166 VVGAA----GSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASP-DG-YDCYFDNVGGEFSNTVIGQMKKFGRIA 234 (325)
T ss_pred EEEEe----CCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCC-CC-eEEEEECCCHHHHHHHHHHhCcCcEEE
Confidence 99888 57889999999999999998763 34 33444443 34 999999999988899999999999985
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.6e-33 Score=252.09 Aligned_cols=232 Identities=27% Similarity=0.321 Sum_probs=203.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||+++++.++++ +++.+.+.|++.+++|+||+.++++|+.|+..+.|.++. ...+|.++|+|++|+|+++|+++.
T Consensus 1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~ 77 (340)
T cd05284 1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD 77 (340)
T ss_pred CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence 689999987653 788888988899999999999999999999988876542 335678999999999999999999
Q ss_pred CCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007 126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (288)
Q Consensus 126 ~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~ 179 (288)
+|++||+|+++.. ..|+|++|+.++.++++++|+++++++++.++..+.|||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~ 157 (340)
T cd05284 78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157 (340)
T ss_pred cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 9999999998641 15899999999999999999999999999999999999999
Q ss_pred HHhh-cCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhc
Q 023007 180 LEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257 (288)
Q Consensus 180 l~~~-~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~ 257 (288)
+.+. ..+.+|++|+|+|+ |.+|++++++|+.+| .+++.++ .++++.+.++++|++++++++....+.+.++++
T Consensus 158 l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 232 (340)
T cd05284 158 VKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVD----RSEEALKLAERLGADHVLNASDDVVEEVRELTG 232 (340)
T ss_pred HHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEe----CCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhC
Confidence 9876 46889999999996 679999999999999 7999887 578888899999999999987765567777777
Q ss_pred CCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVGG-NSASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v 288 (288)
+.+ +|+++||+|+ ...+.++++|+++|+|+
T Consensus 233 ~~~-~dvvld~~g~~~~~~~~~~~l~~~g~~i 263 (340)
T cd05284 233 GRG-ADAVIDFVGSDETLALAAKLLAKGGRYV 263 (340)
T ss_pred CCC-CCEEEEcCCCHHHHHHHHHHhhcCCEEE
Confidence 655 9999999997 44599999999999984
No 39
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.9e-33 Score=250.39 Aligned_cols=235 Identities=25% Similarity=0.309 Sum_probs=208.7
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
+||++.+.++|.+ ..+++++.+.|.+.++||+||+.++++|+.|.....+.++.. ..|..+|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 1 MAKRIEFHKHGGP-EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred CceEEEEeccCCh-hHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCC
Confidence 5899999988876 358999999999999999999999999999998887765432 35778999999999999999999
Q ss_pred CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (288)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~ 206 (288)
+++||+|+......|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+++++|++|+|+|++|.+|++++
T Consensus 79 ~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~ 158 (327)
T PRK10754 79 IKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158 (327)
T ss_pred CCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHH
Confidence 99999998764335899999999999999999999999999999899999999988889999999999999899999999
Q ss_pred HHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCC
Q 023007 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFRE 285 (288)
Q Consensus 207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G 285 (288)
++++.+|++++.++ .++++.+.++++|++++++.+.. ..+.+.+++++.+ +|++|||+|+.....++++++++|
T Consensus 159 ~lak~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g 233 (327)
T PRK10754 159 QWAKALGAKLIGTV----GSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKK-VRVVYDSVGKDTWEASLDCLQRRG 233 (327)
T ss_pred HHHHHcCCEEEEEe----CCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCC-eEEEEECCcHHHHHHHHHHhccCC
Confidence 99999999999888 57888889999999999887654 3466778888766 999999999877788999999999
Q ss_pred eeC
Q 023007 286 EQW 288 (288)
Q Consensus 286 ~~v 288 (288)
+++
T Consensus 234 ~~v 236 (327)
T PRK10754 234 LMV 236 (327)
T ss_pred EEE
Confidence 985
No 40
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=252.96 Aligned_cols=230 Identities=26% Similarity=0.266 Sum_probs=186.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCc-ccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-VGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~~G~~~~~ 126 (288)
|++++++.++.. .++++.+.|.+.++||+|||.+++||++|++.+.+..+.. ..+. ++|||++|+|+++| .++.
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V~evG-~~~~ 75 (350)
T COG1063 1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEVVEVG-VVRG 75 (350)
T ss_pred CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEEEEec-cccC
Confidence 567777776653 3356666666899999999999999999999999876554 3334 99999999999999 7788
Q ss_pred CCCCCEEEecCCC-------------------------------CcccceEEEeeCCcEEE-cCCCCChhhhcccccchH
Q 023007 127 LAPGDWVIPSPPS-------------------------------SGTWQSYVVKDQSVWHK-VSKDSPMEYAATIIVNPL 174 (288)
Q Consensus 127 ~~~Gd~V~~~~~~-------------------------------~G~~a~~~~~~~~~l~~-ip~~~~~~~aa~l~~~~~ 174 (288)
+++||||++.+.. +|+++||+.+|.+++++ +|++++ .+++++..++.
T Consensus 76 ~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~-~~~aal~epla 154 (350)
T COG1063 76 FKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGID-EEAAALTEPLA 154 (350)
T ss_pred CCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCC-hhhhhhcChhh
Confidence 9999999998532 48999999999755555 578874 55555555899
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCc-ccHHHH
Q 023007 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ-LEVKNV 252 (288)
Q Consensus 175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~-~~~~~i 252 (288)
+++++........++.+|+|+|+ |++|++++++++.+|+..+++++ .+++|++++++ .|++.+++... .....+
T Consensus 155 ~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d---~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~ 230 (350)
T COG1063 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVD---RSPERLELAKEAGGADVVVNPSEDDAGAEI 230 (350)
T ss_pred hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence 99877555556666669999999 99999999999999997777765 58999999998 66777776655 345678
Q ss_pred HHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
.+++++.| +|++|||+|.... +.++++++++|+++
T Consensus 231 ~~~t~g~g-~D~vie~~G~~~~~~~ai~~~r~gG~v~ 266 (350)
T COG1063 231 LELTGGRG-ADVVIEAVGSPPALDQALEALRPGGTVV 266 (350)
T ss_pred HHHhCCCC-CCEEEECCCCHHHHHHHHHHhcCCCEEE
Confidence 88898887 9999999997765 99999999999974
No 41
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.6e-33 Score=248.05 Aligned_cols=235 Identities=29% Similarity=0.352 Sum_probs=207.4
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
|||++++.+++... .+.+++.+.|.+.++|++||+.++++|+.|.....+..+.....|.++|+|++|+|+++|+++.+
T Consensus 1 ~m~a~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~ 79 (334)
T PTZ00354 1 MMRAVTLKGFGGVD-VLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKR 79 (334)
T ss_pred CcEEEEEEecCCCc-ceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCC
Confidence 68999999887643 37788888888899999999999999999999888765443345678999999999999999999
Q ss_pred CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (288)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~ 206 (288)
+++||+|+++.. .|++++|++++.++++++|+++++.+++.++.++.+||+++...+++++|++|+|+|++|++|++++
T Consensus 80 ~~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~ 158 (334)
T PTZ00354 80 FKEGDRVMALLP-GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAA 158 (334)
T ss_pred CCCCCEEEEecC-CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence 999999998753 4899999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR 284 (288)
Q Consensus 207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~ 284 (288)
++|+.+|++++.++ .++++.+.++++|.+++++++.. ..+.+..++++.+ +|++|||+|+.....++++++++
T Consensus 159 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~ 233 (334)
T PTZ00354 159 QLAEKYGAATIITT----SSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKG-VNLVLDCVGGSYLSETAEVLAVD 233 (334)
T ss_pred HHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhccC
Confidence 99999999988877 57888899999999999987653 3466777777666 99999999988789999999999
Q ss_pred CeeC
Q 023007 285 EEQW 288 (288)
Q Consensus 285 G~~v 288 (288)
|+|+
T Consensus 234 g~~i 237 (334)
T PTZ00354 234 GKWI 237 (334)
T ss_pred CeEE
Confidence 9985
No 42
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.8e-33 Score=252.34 Aligned_cols=230 Identities=27% Similarity=0.319 Sum_probs=200.2
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
+||++++.+++.+ +++++.+.|++.++||+||+.++++|++|+....|.++. ..|.++|||++|+|+++|+++.+
T Consensus 2 ~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08278 2 KTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTG 76 (365)
T ss_pred ccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCccc
Confidence 6899999987654 778899999999999999999999999999998886552 45789999999999999999999
Q ss_pred CCCCCEEEecC------------------------------------------------CCCcccceEEEeeCCcEEEcC
Q 023007 127 LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHKVS 158 (288)
Q Consensus 127 ~~~Gd~V~~~~------------------------------------------------~~~G~~a~~~~~~~~~l~~ip 158 (288)
|++||+|++.. ...|+|++|+.++.++++++|
T Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 77 LKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 99999999521 014789999999999999999
Q ss_pred CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCC
Q 023007 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG 237 (288)
Q Consensus 159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g 237 (288)
+++++.+++.+++++.+||+++.....+++|++|+|+|+ |++|++++++|+.+|++ ++++. .++++.+.++++|
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~----~~~~k~~~~~~~g 231 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVD----IVDSRLELAKELG 231 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcC
Confidence 999999999999999999999988889999999999976 99999999999999996 55555 5788888999999
Q ss_pred CCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 238 ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 238 ~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
++.+++++.. ..+.+.+++ +.+ +|+++||+|+.. ...++++++++|+++
T Consensus 232 ~~~~i~~~~~~~~~~v~~~~-~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v 282 (365)
T cd08278 232 ATHVINPKEEDLVAAIREIT-GGG-VDYALDTTGVPAVIEQAVDALAPRGTLA 282 (365)
T ss_pred CcEEecCCCcCHHHHHHHHh-CCC-CcEEEECCCCcHHHHHHHHHhccCCEEE
Confidence 9999988764 346677777 545 999999999754 499999999999985
No 43
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.3e-33 Score=249.22 Aligned_cols=231 Identities=22% Similarity=0.249 Sum_probs=189.2
Q ss_pred cceEEEEccCCCC---CcceEEEEc---CCC-CCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCccccc--ceEEEE
Q 023007 47 PSKAVVYEREGPP---DSVIKMIEL---PPV-EVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY--EGVGEV 117 (288)
Q Consensus 47 ~~~a~~~~~~g~~---~~~~~~~~~---~~p-~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V 117 (288)
++|+|++....+. .+.+++++. +.| +++++|||||+.++++||.|+..+.+.... ...|.++|+ |++|+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~-~~~p~~~G~~~~~~G~v 86 (348)
T PLN03154 8 ENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS-YLPPFVPGQRIEGFGVS 86 (348)
T ss_pred cceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC-CCCCcCCCCeeEeeEEE
Confidence 3577777543321 134777774 555 357999999999999999998755432221 234788997 889999
Q ss_pred EEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCc--EEE--cCCCCChh-hhcccccchHHHHHHHHhhcCCCCCCeE
Q 023007 118 YSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSV--WHK--VSKDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSI 192 (288)
Q Consensus 118 ~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~--l~~--ip~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~v 192 (288)
..+|+++++|++||+|+++ |+|++|..++... +++ +|+++++. +++.++++++|||+++.+.+++++|++|
T Consensus 87 ~~vg~~v~~~~~Gd~V~~~----~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V 162 (348)
T PLN03154 87 KVVDSDDPNFKPGDLISGI----TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV 162 (348)
T ss_pred EEEecCCCCCCCCCEEEec----CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence 9999999999999999864 6899999999753 544 48999986 6889999999999999888899999999
Q ss_pred EEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCc--ccHHHHHHHhcCCCCccEEEECC
Q 023007 193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCV 269 (288)
Q Consensus 193 lI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~ 269 (288)
||+|++|++|++++|+|+.+|++|++++ .++++.++++ ++|+++++++++ ...+.+.+++++ + +|++|||+
T Consensus 163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~----~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~-g-vD~v~d~v 236 (348)
T PLN03154 163 FVSAASGAVGQLVGQLAKLHGCYVVGSA----GSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE-G-IDIYFDNV 236 (348)
T ss_pred EEecCccHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC-C-cEEEEECC
Confidence 9999999999999999999999999887 5788888887 799999999874 334566666653 4 99999999
Q ss_pred CcccHHHHHhhccCCCeeC
Q 023007 270 GGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 270 g~~~~~~a~~~l~~~G~~v 288 (288)
|+..+..++++++++|+++
T Consensus 237 G~~~~~~~~~~l~~~G~iv 255 (348)
T PLN03154 237 GGDMLDAALLNMKIHGRIA 255 (348)
T ss_pred CHHHHHHHHHHhccCCEEE
Confidence 9987799999999999985
No 44
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.6e-33 Score=252.46 Aligned_cols=217 Identities=17% Similarity=0.156 Sum_probs=175.9
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC---CCCCCcccccceEEEEEEecCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---RPKVPAVGGYEGVGEVYSVGSAV 124 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~---~~~~p~~~G~e~~G~V~~~G~~~ 124 (288)
.+++++++++. +++++.|.|. +++||+|||.++|||++|.+.+.|.+.. ...+|.++|||++|+|+++|.+
T Consensus 3 ~~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~- 76 (341)
T cd08237 3 NQVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG- 76 (341)
T ss_pred ccceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence 47788888775 8899999985 9999999999999999999999886532 1256899999999999998764
Q ss_pred CCCCCCCEEEecCC-----------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 125 TRLAPGDWVIPSPP-----------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 125 ~~~~~Gd~V~~~~~-----------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
+|++||+|+..+. .+|+|+||+++|.++++++|+++++++|+.+. ++.++|+++.
T Consensus 77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~ 154 (341)
T cd08237 77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAIS 154 (341)
T ss_pred -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHH
Confidence 7999999987532 14889999999999999999999998877554 7889999886
Q ss_pred hh--cCCCCCCeEEEeCCCChHHHHHHHHHHH-cC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhc
Q 023007 182 DF--TTLNSGDSIVQNGATSIVGQCIIQIARH-RG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257 (288)
Q Consensus 182 ~~--~~~~~g~~vlI~g~~g~vG~~a~~la~~-~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~ 257 (288)
.. ..+++|++|+|+|+ |++|++++|+++. +| .+++++. .+++|++++++++.+..++ .+..
T Consensus 155 ~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~----~~~~k~~~a~~~~~~~~~~----------~~~~ 219 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFG----KHQEKLDLFSFADETYLID----------DIPE 219 (341)
T ss_pred HHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEe----CcHhHHHHHhhcCceeehh----------hhhh
Confidence 53 45689999999997 9999999999986 55 5777776 5788888888766553321 1122
Q ss_pred CCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVGGN----SASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v 288 (288)
+.+ +|+||||+|+. .++.++++++++|+++
T Consensus 220 ~~g-~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv 253 (341)
T cd08237 220 DLA-VDHAFECVGGRGSQSAINQIIDYIRPQGTIG 253 (341)
T ss_pred ccC-CcEEEECCCCCccHHHHHHHHHhCcCCcEEE
Confidence 223 99999999953 3488999999999985
No 45
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=8.4e-33 Score=248.72 Aligned_cols=229 Identities=24% Similarity=0.226 Sum_probs=197.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++. +.+++.+.|.+.++||+||+.++++|++|++.+.+.+.. ...|.++|||++|+|+++|+++++|
T Consensus 1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~ 75 (351)
T cd08285 1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDF 75 (351)
T ss_pred CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCcc
Confidence 68999998775 678899988899999999999999999999888776543 2558899999999999999999999
Q ss_pred CCCCEEEecCC-----------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHHH
Q 023007 128 APGDWVIPSPP-----------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTA 176 (288)
Q Consensus 128 ~~Gd~V~~~~~-----------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ta 176 (288)
++||+|++.+. ..|+|++|+.++.. .++++|+++++.+++.++.++.||
T Consensus 76 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta 155 (351)
T cd08285 76 KPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG 155 (351)
T ss_pred CCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence 99999998431 25899999999974 899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHH
Q 023007 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKG 254 (288)
Q Consensus 177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~ 254 (288)
|+++ ....+++|++|||+|+ |++|++++|+|+.+|++ ++++. .++++.+.++++|++++++++.. ..+.+..
T Consensus 156 ~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~ 229 (351)
T cd08285 156 FHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVG----SRPNRVELAKEYGATDIVDYKNGDVVEQILK 229 (351)
T ss_pred HHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCceEecCCCCCHHHHHHH
Confidence 9996 5588999999999975 99999999999999996 55555 47788899999999999988654 3466777
Q ss_pred HhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 255 LLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
++.+.+ +|+++||+|+.. ...++++++++|+++
T Consensus 230 ~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v 263 (351)
T cd08285 230 LTGGKG-VDAVIIAGGGQDTFEQALKVLKPGGTIS 263 (351)
T ss_pred HhCCCC-CcEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 776665 999999999754 499999999999985
No 46
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.7e-33 Score=248.89 Aligned_cols=216 Identities=18% Similarity=0.187 Sum_probs=174.8
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecC-hHHHHHHhCCCCCC--CCCCcccccceEEEEEEecCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPIN-PSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGSA 123 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~~ 123 (288)
+||++++.+++. +++++.|.|++.++||+||+.++++| ++|.+.+.|.++.. ..+|.++|||++|+|+++|++
T Consensus 1 ~~ka~~~~~~~~----l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 1 KTQAIVLSGPNQ----IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred CceEEEEeCCCe----EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 468899987654 88999999999999999999999996 69998888865432 256899999999999999999
Q ss_pred CCCCCCCCEEEecCC--------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007 124 VTRLAPGDWVIPSPP--------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195 (288)
Q Consensus 124 ~~~~~~Gd~V~~~~~--------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~ 195 (288)
+ +|++||+|+.... ..|+|+||+.+|.+.++++|++++++. +.++ ++.|||+++.+ . ..++++++|+
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~ 151 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV 151 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence 8 6999999997431 159999999999999999999999865 4444 57899999865 3 3468899999
Q ss_pred CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH-
Q 023007 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA- 274 (288)
Q Consensus 196 g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~- 274 (288)
|+ |++|++++|+|+.+|++++++++ .++++++.++++ +++|+.+. .+. ++|++|||+|+...
T Consensus 152 G~-G~vG~~a~q~ak~~G~~~v~~~~---~~~~rl~~a~~~---~~i~~~~~---------~~~-g~Dvvid~~G~~~~~ 214 (308)
T TIGR01202 152 GH-GTLGRLLARLTKAAGGSPPAVWE---TNPRRRDGATGY---EVLDPEKD---------PRR-DYRAIYDASGDPSLI 214 (308)
T ss_pred CC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHhhhhc---cccChhhc---------cCC-CCCEEEECCCCHHHH
Confidence 86 99999999999999999776664 356666665443 34544221 122 39999999999764
Q ss_pred HHHHhhccCCCeeC
Q 023007 275 SKVLKFLRFREEQW 288 (288)
Q Consensus 275 ~~a~~~l~~~G~~v 288 (288)
+.++++++++|+++
T Consensus 215 ~~~~~~l~~~G~iv 228 (308)
T TIGR01202 215 DTLVRRLAKGGEIV 228 (308)
T ss_pred HHHHHhhhcCcEEE
Confidence 99999999999985
No 47
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.3e-33 Score=252.86 Aligned_cols=240 Identities=24% Similarity=0.298 Sum_probs=203.1
Q ss_pred CCccceEEEEcc--CCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC---------CCCCC-ccccc
Q 023007 44 MSPPSKAVVYER--EGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---------RPKVP-AVGGY 111 (288)
Q Consensus 44 ~~~~~~a~~~~~--~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~ 111 (288)
++.+||++++.. .+++.+.+++.+.|.|.+.+++++|++.++++|+.|.....+.... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 567899999965 6766566999999999999999999999999999998766543210 00123 27999
Q ss_pred ceEEEEEEecCCCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChh
Q 023007 112 EGVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPME 164 (288)
Q Consensus 112 e~~G~V~~~G~~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~ 164 (288)
|++|+|+++|+++++|++||+|++.+. ..|+|++|+.++.++++++|+++++.
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 999999999999999999999998642 24899999999999999999999999
Q ss_pred hhcccccchHHHHHHHHh--hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007 165 YAATIIVNPLTALRMLED--FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242 (288)
Q Consensus 165 ~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~ 242 (288)
+++.+..++.+||+++.. ..++.+|++|+|+|++|++|++++++++.+|+++++++ .++++.+.++++|++.++
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~----~~~~~~~~~~~~g~~~~v 239 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVV----SSPEKAEYCRELGAEAVI 239 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCCEEe
Confidence 999999999999999865 47789999999999999999999999999999988887 578888999999999999
Q ss_pred eCCcc-----------------------cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 243 TESQL-----------------------EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 243 ~~~~~-----------------------~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
|+++. +.+.+.+++++.+ +|++|||+|+.....++++++++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~d~vld~~g~~~~~~~~~~l~~~G~~v 307 (398)
T TIGR01751 240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGED-PDIVFEHPGRATFPTSVFVCRRGGMVV 307 (398)
T ss_pred cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHhhccCCEEE
Confidence 87542 1234666777655 999999999877788999999999875
No 48
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.1e-32 Score=244.41 Aligned_cols=227 Identities=22% Similarity=0.289 Sum_probs=196.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++.. +++++.|.|++.++||+|++.++++|+.|...+.|..+. ...|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~ 76 (333)
T cd08296 1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRW 76 (333)
T ss_pred CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccC
Confidence 689999988543 889999999999999999999999999999988886543 2457899999999999999999999
Q ss_pred CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
++||+|++.+ ...|++++|+.++.+.++++|+++++.+++.++.++.++|+++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 77 KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 9999998631 1148999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCC
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL 259 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~ 259 (288)
... .+.+|++|+|+| +|.+|++++++|+.+|++++.++ .++++.+.++++|++++++++... .+.+.++ +
T Consensus 157 ~~~-~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~--~- 227 (333)
T cd08296 157 RNS-GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAIS----RGSDKADLARKLGAHHYIDTSKEDVAEALQEL--G- 227 (333)
T ss_pred Hhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHcCCcEEecCCCccHHHHHHhc--C-
Confidence 764 899999999999 59999999999999999999888 578889999999999999887643 3444444 2
Q ss_pred CCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGG-NSASKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v 288 (288)
+ +|+++||.|. .....++++++++|+|+
T Consensus 228 ~-~d~vi~~~g~~~~~~~~~~~l~~~G~~v 256 (333)
T cd08296 228 G-AKLILATAPNAKAISALVGGLAPRGKLL 256 (333)
T ss_pred C-CCEEEECCCchHHHHHHHHHcccCCEEE
Confidence 3 9999999974 44588999999999985
No 49
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.4e-32 Score=244.72 Aligned_cols=233 Identities=29% Similarity=0.365 Sum_probs=203.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++. ..+++++.+.|.+.+++++||+.++++|++|...+.+..+.....|..+|+|++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~ 78 (341)
T cd08297 1 MKAAVVEEFGE--KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGL 78 (341)
T ss_pred CceEEeeccCC--CCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCC
Confidence 78999988772 2388999999999999999999999999999998887665434556789999999999999999999
Q ss_pred CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
++||+|++.+ ...|++++|+.++.+.++++|+++++.+++.++..+.|||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~ 158 (341)
T cd08297 79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158 (341)
T ss_pred CCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence 9999999752 0158999999999999999999999999999999999999998
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCC
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANL 259 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~ 259 (288)
.. .+++++++|+|+|+++.+|++++++|+++|++++.++ .++++.+.++++|++++++++.. ..+.+.+++++.
T Consensus 159 ~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08297 159 KK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAID----VGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGG 233 (341)
T ss_pred Hh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCC
Confidence 77 5899999999999988899999999999999999998 57888888899999999988764 446677777666
Q ss_pred CCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+ +|+++||.++.. ...++++++++|+++
T Consensus 234 ~-vd~vl~~~~~~~~~~~~~~~l~~~g~~v 262 (341)
T cd08297 234 G-AHAVVVTAVSAAAYEQALDYLRPGGTLV 262 (341)
T ss_pred C-CCEEEEcCCchHHHHHHHHHhhcCCEEE
Confidence 5 999999777544 489999999999985
No 50
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-32 Score=246.64 Aligned_cols=232 Identities=26% Similarity=0.364 Sum_probs=194.9
Q ss_pred ceEEEEccCCCCCcceEEEE-cCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-------------------CCCCCc
Q 023007 48 SKAVVYEREGPPDSVIKMIE-LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------------------RPKVPA 107 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~-~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~ 107 (288)
||++.+.+++.+. .+.+.+ .+.|.+.+++|+||+.++++|++|...+.|.++. ..++|.
T Consensus 1 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGGLD-KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCCcc-ceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 6888888766543 255654 4667789999999999999999999988775431 235678
Q ss_pred ccccceEEEEEEecCCCCCCCCCCEEEecCC------------------CCcccceEEEeeCCcEEEcCCCCChhhhccc
Q 023007 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169 (288)
Q Consensus 108 ~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l 169 (288)
++|||++|+|+++|+++++|++||+|++.+. ..|++++|+.++.+.++++|+++++.+++.+
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 9999999999999999999999999998421 1489999999999999999999999999999
Q ss_pred ccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH
Q 023007 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV 249 (288)
Q Consensus 170 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 249 (288)
++++.+||+++ ....+++|++|+|+|++|++|++++++|+.+|++++.++ .++ +.+.++++|++.+.+......
T Consensus 160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~----~~~-~~~~~~~~g~~~~~~~~~~~~ 233 (350)
T cd08274 160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVA----GAA-KEEAVRALGADTVILRDAPLL 233 (350)
T ss_pred ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEe----Cch-hhHHHHhcCCeEEEeCCCccH
Confidence 99999999998 568899999999999999999999999999999998887 344 778888999987666554444
Q ss_pred HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 250 KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 250 ~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
.. ...+.+.+ +|++|||+|++..+.++++++++|+++
T Consensus 234 ~~-~~~~~~~~-~d~vi~~~g~~~~~~~~~~l~~~G~~v 270 (350)
T cd08274 234 AD-AKALGGEP-VDVVADVVGGPLFPDLLRLLRPGGRYV 270 (350)
T ss_pred HH-HHhhCCCC-CcEEEecCCHHHHHHHHHHhccCCEEE
Confidence 44 45566655 999999999987799999999999985
No 51
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.8e-32 Score=243.74 Aligned_cols=232 Identities=22% Similarity=0.251 Sum_probs=195.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+.+++ +++.+++.|.|.+.++||+||+.++++|+.|.....+.......+|.++|||++|+|++. ++.+|
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~--~~~~~ 77 (326)
T cd08289 1 FQALVVEKDEDD-VSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVES--NDPRF 77 (326)
T ss_pred CeeEEEeccCCc-ceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEc--CCCCC
Confidence 689999988765 358889999999999999999999999999987654322222245788999999999985 45779
Q ss_pred CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcC---CCCCCeEEEeCCCC
Q 023007 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVQNGATS 199 (288)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~g~~g 199 (288)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++..... ..++++|+|+|++|
T Consensus 78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (326)
T cd08289 78 KPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATG 157 (326)
T ss_pred CCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCc
Confidence 99999998752 25899999999999999999999999999999999999988865432 34578999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279 (288)
Q Consensus 200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~ 279 (288)
.+|++++++|+.+|+++++++ .++++.+.++++|++++++.++...+.+..++ +. ++|++|||+|+.....+++
T Consensus 158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~-~~d~vld~~g~~~~~~~~~ 231 (326)
T cd08289 158 GVGSLAVSILAKLGYEVVAST----GKADAADYLKKLGAKEVIPREELQEESIKPLE-KQ-RWAGAVDPVGGKTLAYLLS 231 (326)
T ss_pred hHHHHHHHHHHHCCCeEEEEe----cCHHHHHHHHHcCCCEEEcchhHHHHHHHhhc-cC-CcCEEEECCcHHHHHHHHH
Confidence 999999999999999999888 57888999999999999987765444555554 33 4999999999977799999
Q ss_pred hccCCCeeC
Q 023007 280 FLRFREEQW 288 (288)
Q Consensus 280 ~l~~~G~~v 288 (288)
+++++|+++
T Consensus 232 ~l~~~G~~i 240 (326)
T cd08289 232 TLQYGGSVA 240 (326)
T ss_pred HhhcCCEEE
Confidence 999999985
No 52
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.3e-32 Score=247.80 Aligned_cols=230 Identities=23% Similarity=0.256 Sum_probs=197.3
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
+||+.++..+++. +++++.|.|++.++||+||+.++++|++|.+.+.|.+.. .+|.++|||++|+|+++|+++..
T Consensus 7 ~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~ 81 (373)
T cd08299 7 KCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTT 81 (373)
T ss_pred eeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCcc
Confidence 4788888887664 788999999999999999999999999999998886532 45789999999999999999999
Q ss_pred CCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCC
Q 023007 127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK 159 (288)
Q Consensus 127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~ 159 (288)
+++||+|++.+. ..|+|+||++++.+.++++|+
T Consensus 82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 999999997620 147899999999999999999
Q ss_pred CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCC
Q 023007 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA 238 (288)
Q Consensus 160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~ 238 (288)
++++.+++.+++++.+||+++...+++++|++|+|+|+ |++|++++++++.+|+ +|+++. .++++++.++++|+
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~a~~lGa 236 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD----INKDKFAKAKELGA 236 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCC
Confidence 99999999999999999999888889999999999976 9999999999999999 788887 57889999999999
Q ss_pred CEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhc-cCCCeeC
Q 023007 239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFL-RFREEQW 288 (288)
Q Consensus 239 ~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l-~~~G~~v 288 (288)
+++++..+. ..+.+.+++++ ++|+++||+|++. ...++..+ +++|+|+
T Consensus 237 ~~~i~~~~~~~~~~~~v~~~~~~--~~d~vld~~g~~~~~~~~~~~~~~~~G~~v 289 (373)
T cd08299 237 TECINPQDYKKPIQEVLTEMTDG--GVDFSFEVIGRLDTMKAALASCHEGYGVSV 289 (373)
T ss_pred ceEecccccchhHHHHHHHHhCC--CCeEEEECCCCcHHHHHHHHhhccCCCEEE
Confidence 999987643 23556666664 4999999999754 46666654 6788874
No 53
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.3e-32 Score=252.46 Aligned_cols=232 Identities=16% Similarity=0.121 Sum_probs=186.9
Q ss_pred cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHH-hCCCC-C----CCCCCcccccceEEEEEEe
Q 023007 47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYP-V----RPKVPAVGGYEGVGEVYSV 120 (288)
Q Consensus 47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~-~g~~~-~----~~~~p~~~G~e~~G~V~~~ 120 (288)
+||++++.+++. +++++.|.|++.++||+|||.++++|++|.+.+ .|... . ...+|.++|||++|+|+++
T Consensus 2 ~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 2 KTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred CcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 578999988774 899999999999999999999999999999976 34321 1 0135789999999999999
Q ss_pred cCCCC-CCCCCCEEEecCC---------------CCcccceEEEeeCC----cEEEcCCCCChhhhcccccchH---HHH
Q 023007 121 GSAVT-RLAPGDWVIPSPP---------------SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPL---TAL 177 (288)
Q Consensus 121 G~~~~-~~~~Gd~V~~~~~---------------~~G~~a~~~~~~~~----~l~~ip~~~~~~~aa~l~~~~~---ta~ 177 (288)
|++++ +|++||+|++.+. .+|+|+||++++.+ .++++|+++++.+++.+. ++. +++
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~ 156 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAY 156 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHh
Confidence 99998 6999999988532 15899999999986 689999999999988653 221 233
Q ss_pred HHH--------HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC---eEEEEEcCCCCCHHHHHHHHhC--------CC
Q 023007 178 RML--------EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLKGL--------GA 238 (288)
Q Consensus 178 ~~l--------~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~---~vi~~~~~~~~~~~~~~~~~~~--------g~ 238 (288)
.++ .+.+++++|++|+|+|++|++|++++|+|+.+|+ +|+++. .++++++.++++ |+
T Consensus 157 ~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~----~~~~r~~~a~~~~~~~~~~~Ga 232 (410)
T cd08238 157 TANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTD----VNDERLARAQRLFPPEAASRGI 232 (410)
T ss_pred hhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEc----CCHHHHHHHHHhccccccccCc
Confidence 332 2457889999999999889999999999999864 677776 588999999887 66
Q ss_pred C-EEEeCCc--ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 239 D-EVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 239 ~-~v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+ .+++++. ...+.+.+++++.+ +|++|||+|+... +.++++++++|+++
T Consensus 233 ~~~~i~~~~~~~~~~~v~~~t~g~g-~D~vid~~g~~~~~~~a~~~l~~~G~~v 285 (410)
T cd08238 233 ELLYVNPATIDDLHATLMELTGGQG-FDDVFVFVPVPELVEEADTLLAPDGCLN 285 (410)
T ss_pred eEEEECCCccccHHHHHHHHhCCCC-CCEEEEcCCCHHHHHHHHHHhccCCeEE
Confidence 6 5677653 34466778888766 9999999986554 99999999998763
No 54
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3e-32 Score=241.99 Aligned_cols=232 Identities=23% Similarity=0.268 Sum_probs=197.7
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++++++++ +.+++++.|.|.+.+++|+|++.++++|++|...+.|..+.....|..+|||++|+|+++ +++.|
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~ 77 (325)
T cd05280 1 FKALVVEEQDGG-VSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRF 77 (325)
T ss_pred CceEEEcccCCC-CcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCC
Confidence 689999988764 348999999999999999999999999999999988876544455788999999999998 45689
Q ss_pred CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCC--C-CCCeEEEeCCCC
Q 023007 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL--N-SGDSIVQNGATS 199 (288)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~g~~vlI~g~~g 199 (288)
++||+|++... ..|+|++|++++.+.++++|+++++.+++.+++.+.++|+++..+... . .+++|+|+|++|
T Consensus 78 ~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (325)
T cd05280 78 REGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG 157 (325)
T ss_pred CCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence 99999998631 258999999999999999999999999999999999999998765433 5 457999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279 (288)
Q Consensus 200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~ 279 (288)
.+|++++++|+.+|+++++++ .++++.++++++|++++++++... ..+.....+.+ +|++|||+|+.....+++
T Consensus 158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~ 231 (325)
T cd05280 158 GVGSIAVAILAKLGYTVVALT----GKEEQADYLKSLGASEVLDREDLL-DESKKPLLKAR-WAGAIDTVGGDVLANLLK 231 (325)
T ss_pred HHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEcchhHH-HHHHHHhcCCC-ccEEEECCchHHHHHHHH
Confidence 999999999999999998888 578899999999999998876542 23333344444 999999999987799999
Q ss_pred hccCCCeeC
Q 023007 280 FLRFREEQW 288 (288)
Q Consensus 280 ~l~~~G~~v 288 (288)
+++++|+||
T Consensus 232 ~l~~~g~~v 240 (325)
T cd05280 232 QTKYGGVVA 240 (325)
T ss_pred hhcCCCEEE
Confidence 999999985
No 55
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=5.7e-32 Score=240.14 Aligned_cols=234 Identities=24% Similarity=0.318 Sum_probs=201.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||++++++++.+ ..+++.+.+.|.+.+++|+|++.++++|+.|.....|..+. ....|.++|||++|+|+++|+++.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~ 79 (324)
T cd08244 1 MRAIRLHEFGPP-EVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD 79 (324)
T ss_pred CeEEEEcCCCCc-cceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence 688999876654 23777777777789999999999999999999988775432 234567899999999999999999
Q ss_pred CCCCCCEEEecCC-CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHH
Q 023007 126 RLAPGDWVIPSPP-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 204 (288)
Q Consensus 126 ~~~~Gd~V~~~~~-~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~ 204 (288)
++++||+|++... ..|+|++|+.++..+++++|+++++.+++.+++.++||| ++....+++++++|+|+|++|.+|++
T Consensus 80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~ 158 (324)
T cd08244 80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSL 158 (324)
T ss_pred CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHH
Confidence 9999999998741 147999999999999999999999999999999999995 55566889999999999999999999
Q ss_pred HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF 283 (288)
Q Consensus 205 a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~ 283 (288)
++++|+.+|++++.++ .++++.+.++++|.+++++++... .+.+.+++++.+ +|+++||+|+.....+++++++
T Consensus 159 ~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~ 233 (324)
T cd08244 159 LVQLAKAAGATVVGAA----GGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGG-VTVVLDGVGGAIGRAALALLAP 233 (324)
T ss_pred HHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCC-ceEEEECCChHhHHHHHHHhcc
Confidence 9999999999999988 578888888999999988877543 466777777665 9999999999888999999999
Q ss_pred CCeeC
Q 023007 284 REEQW 288 (288)
Q Consensus 284 ~G~~v 288 (288)
+|+++
T Consensus 234 ~g~~v 238 (324)
T cd08244 234 GGRFL 238 (324)
T ss_pred CcEEE
Confidence 99985
No 56
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.4e-32 Score=245.04 Aligned_cols=229 Identities=27% Similarity=0.287 Sum_probs=198.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++.+.+++. +.+.+.|.|.+ .+++|+||+.++++|+.|+..+.|.++. .+.|.++|+|++|+|+++|+++++
T Consensus 1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 75 (347)
T cd05278 1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKR 75 (347)
T ss_pred CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccc
Confidence 58899988765 78889998888 8999999999999999999988887654 356889999999999999999999
Q ss_pred CCCCCEEEecC-----------------------------CCCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHH
Q 023007 127 LAPGDWVIPSP-----------------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT 175 (288)
Q Consensus 127 ~~~Gd~V~~~~-----------------------------~~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~t 175 (288)
|++||+|++.+ ...|+|++|++++.+ +++++|+++++.+++.++.+++|
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t 155 (347)
T cd05278 76 LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT 155 (347)
T ss_pred cCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence 99999999732 125899999999987 89999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHH
Q 023007 176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVK 253 (288)
Q Consensus 176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~ 253 (288)
||+++ ...++++|++|+|.|+ |.+|++++|+|+.+|+ +++++. .++++.+.++++|++++++++.. ..+.+.
T Consensus 156 a~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~ 229 (347)
T cd05278 156 GFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVD----SNPERLDLAKEAGATDIINPKNGDIVEQIL 229 (347)
T ss_pred eeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHHHHhCCcEEEcCCcchHHHHHH
Confidence 99998 5688999999999875 9999999999999997 677775 46788888899999999988764 345677
Q ss_pred HHhcCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007 254 GLLANLPEPALGFNCVGG-NSASKVLKFLRFREEQW 288 (288)
Q Consensus 254 ~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v 288 (288)
.++++.+ +|++|||+|+ ...+.++++|+++|+++
T Consensus 230 ~~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v 264 (347)
T cd05278 230 ELTGGRG-VDCVIEAVGFEETFEQAVKVVRPGGTIA 264 (347)
T ss_pred HHcCCCC-CcEEEEccCCHHHHHHHHHHhhcCCEEE
Confidence 7776655 9999999998 45699999999999975
No 57
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.5e-32 Score=241.37 Aligned_cols=221 Identities=42% Similarity=0.607 Sum_probs=198.3
Q ss_pred ceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCc
Q 023007 62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG 141 (288)
Q Consensus 62 ~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G 141 (288)
.+++++.+.|.+.+++|+||+.++++|+.|...+.+........|.++|+|++|+|+.+|++++++++||+|++.+. .|
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~g 91 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-EG 91 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC-CC
Confidence 48888888888999999999999999999999887765443456789999999999999999999999999999762 37
Q ss_pred ccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 142 ~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...+.+.+|++|+|+|++|.+|++++++|+.+|+++++++
T Consensus 92 ~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~- 170 (323)
T cd05282 92 TWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVV- 170 (323)
T ss_pred cceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEe-
Confidence 9999999999999999999999999999999999999998888899999999999999999999999999999999988
Q ss_pred CCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 222 DRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
.++++.+.++++|++++++++.. ..+.+.+++++.+ +|++|||+|+.....++++++++|+|+
T Consensus 171 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~~g~~v 234 (323)
T cd05282 171 ---RRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAG-ARLALDAVGGESATRLARSLRPGGTLV 234 (323)
T ss_pred ---cChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCC-ceEEEECCCCHHHHHHHHhhCCCCEEE
Confidence 56788888899999999988763 4466777887766 999999999988888899999999985
No 58
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4.6e-32 Score=245.05 Aligned_cols=230 Identities=28% Similarity=0.355 Sum_probs=201.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++++ +++++.+.|.+.+++|+|++.++++|+.|...+.|.++. .+|.++|+|++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (363)
T cd08279 1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGV 75 (363)
T ss_pred CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCcccc
Confidence 689999988754 788999999999999999999999999999988876653 457789999999999999999999
Q ss_pred CCCCEEEecC----------------------------------------------CCCcccceEEEeeCCcEEEcCCCC
Q 023007 128 APGDWVIPSP----------------------------------------------PSSGTWQSYVVKDQSVWHKVSKDS 161 (288)
Q Consensus 128 ~~Gd~V~~~~----------------------------------------------~~~G~~a~~~~~~~~~l~~ip~~~ 161 (288)
++||+|++.+ ...|+|++|+.++.+.++++|+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 76 KPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCC
Confidence 9999999842 125899999999999999999999
Q ss_pred ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADE 240 (288)
Q Consensus 162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~ 240 (288)
++.+++.+++.+.+||+++.....+.+|++|+|+|+ |++|++++++|+.+|++ ++.+. .++++.+.++++|+++
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~----~~~~~~~~~~~~g~~~ 230 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVD----PVPEKLELARRFGATH 230 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHHHhCCeE
Confidence 999999999999999999988899999999999965 99999999999999997 77776 5788888889999999
Q ss_pred EEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 241 VFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 241 v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+++++.. ....+..++.+.+ +|+++||+++.. ...++++++++|+++
T Consensus 231 vv~~~~~~~~~~l~~~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~G~~v 279 (363)
T cd08279 231 TVNASEDDAVEAVRDLTDGRG-ADYAFEAVGRAATIRQALAMTRKGGTAV 279 (363)
T ss_pred EeCCCCccHHHHHHHHcCCCC-CCEEEEcCCChHHHHHHHHHhhcCCeEE
Confidence 9988764 3456777776655 999999999654 489999999999985
No 59
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.9e-32 Score=240.38 Aligned_cols=232 Identities=28% Similarity=0.345 Sum_probs=200.9
Q ss_pred cceEEEEccCCC-CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007 47 PSKAVVYEREGP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 47 ~~~a~~~~~~g~-~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
.||+|++.+++. +.+.+++++.+.|.+.++|++||+.++++|+.|+....|.+.....+|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 379999999776 2345889999999999999999999999999999988876554345678999999999999999999
Q ss_pred CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007 126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205 (288)
Q Consensus 126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a 205 (288)
++++||+|+++. .|+|++|+.++.+.++++|++ +.+++.++.++.+||+++....++++|++|+|+|++|.+|+++
T Consensus 81 ~~~~Gd~V~~~~--~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~ 156 (329)
T cd08250 81 DFKVGDAVATMS--FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFA 156 (329)
T ss_pred CCCCCCEEEEec--CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHH
Confidence 999999999875 479999999999999999997 3567788889999999998888999999999999999999999
Q ss_pred HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR 284 (288)
Q Consensus 206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~ 284 (288)
+++++..|++++.++ .++++.+.++++|.+.+++.+.... +.+..+.+ .+ +|++|||.|+.....++++++++
T Consensus 157 ~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~-vd~v~~~~g~~~~~~~~~~l~~~ 230 (329)
T cd08250 157 VQLAKLAGCHVIGTC----SSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KG-VDVVYESVGGEMFDTCVDNLALK 230 (329)
T ss_pred HHHHHHcCCeEEEEe----CcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CC-CeEEEECCcHHHHHHHHHHhccC
Confidence 999999999999988 5778888889999988888765433 44544443 34 99999999987779999999999
Q ss_pred CeeC
Q 023007 285 EEQW 288 (288)
Q Consensus 285 G~~v 288 (288)
|+|+
T Consensus 231 g~~v 234 (329)
T cd08250 231 GRLI 234 (329)
T ss_pred CeEE
Confidence 9975
No 60
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=4.2e-32 Score=245.66 Aligned_cols=230 Identities=25% Similarity=0.319 Sum_probs=201.5
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC-
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR- 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~- 126 (288)
||+|++..++.+ +++++.|.|.+.++||+|++.++++|+.|+..+.+.++. .+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~ 75 (367)
T cd08263 1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENP 75 (367)
T ss_pred CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCC
Confidence 689999988643 778888988899999999999999999999988876654 45789999999999999999988
Q ss_pred --CCCCCEEEecC------------------------------------------------CCCcccceEEEeeCCcEEE
Q 023007 127 --LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHK 156 (288)
Q Consensus 127 --~~~Gd~V~~~~------------------------------------------------~~~G~~a~~~~~~~~~l~~ 156 (288)
|++||+|++.+ ...|++++|+.++.+.+++
T Consensus 76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (367)
T cd08263 76 YGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAP 155 (367)
T ss_pred CcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEE
Confidence 99999999831 1258999999999999999
Q ss_pred cCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHh
Q 023007 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG 235 (288)
Q Consensus 157 ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~ 235 (288)
+|+++++.+++.++.+++|||+++.....+.++++|+|+| +|++|++++++|+.+|++ ++++. .++++.+.+++
T Consensus 156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~----~s~~~~~~~~~ 230 (367)
T cd08263 156 LPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVD----VRDEKLAKAKE 230 (367)
T ss_pred CCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHH
Confidence 9999999999999999999999998888889999999996 599999999999999998 77776 57888888899
Q ss_pred CCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 236 LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 236 ~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
+|.+.+++++... .+.+..++++.+ +|++|||+|+. ....++++++++|+|+
T Consensus 231 ~g~~~v~~~~~~~~~~~l~~~~~~~~-~d~vld~vg~~~~~~~~~~~l~~~G~~v 284 (367)
T cd08263 231 LGATHTVNAAKEDAVAAIREITGGRG-VDVVVEALGKPETFKLALDVVRDGGRAV 284 (367)
T ss_pred hCCceEecCCcccHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHHhcCCEEE
Confidence 9999999987543 456777776665 99999999997 6688999999999985
No 61
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.2e-32 Score=243.47 Aligned_cols=231 Identities=25% Similarity=0.283 Sum_probs=199.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-----------CCCCCcccccceEEE
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPAVGGYEGVGE 116 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~ 116 (288)
||++++..++.+ +++++.|.|++.++||+|++.++++|+.|+..+.|.++. ....|.++|+|++|+
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 77 (350)
T cd08240 1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE 77 (350)
T ss_pred CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence 688988877754 788899999999999999999999999999988875432 223467899999999
Q ss_pred EEEecCCCCCCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007 117 VYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (288)
Q Consensus 117 V~~~G~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~ 170 (288)
|+++|++++++++||+|++++. ..|++++|+.++.+.++++|+++++.+++.+.
T Consensus 78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~ 157 (350)
T cd08240 78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA 157 (350)
T ss_pred EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence 9999999999999999998731 25899999999999999999999999999999
Q ss_pred cchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-
Q 023007 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE- 248 (288)
Q Consensus 171 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~- 248 (288)
+.+++||+++.....++++++|+|+|+ |++|++++|+|+.+|+ +++++. .++++.+.++++|++.+++++...
T Consensus 158 ~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (350)
T cd08240 158 CSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVD----IDEAKLEAAKAAGADVVVNGSDPDA 232 (350)
T ss_pred chhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCcEEecCCCccH
Confidence 999999999988777788999999975 9999999999999999 566766 578888999999999888876543
Q ss_pred HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 249 VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 249 ~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
.+.+.++.++ + +|++|||+|.. ....++++|+++|+|+
T Consensus 233 ~~~~~~~~~~-~-~d~vid~~g~~~~~~~~~~~l~~~g~~v 271 (350)
T cd08240 233 AKRIIKAAGG-G-VDAVIDFVNNSATASLAFDILAKGGKLV 271 (350)
T ss_pred HHHHHHHhCC-C-CcEEEECCCCHHHHHHHHHHhhcCCeEE
Confidence 4567777666 4 99999999864 4599999999999985
No 62
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=6.4e-32 Score=240.02 Aligned_cols=230 Identities=26% Similarity=0.295 Sum_probs=196.3
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|++++...+.+ +++++++.|.|.+.+++|+||+.++++|+.|...+.|..+.....|..+|||++|+|+. .++.+|+
T Consensus 1 ~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 1 KALVVEKEDGK-VSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred CeEEEccCCCC-cceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCC
Confidence 57888887765 46899999999999999999999999999999988886543335578899999999988 5667899
Q ss_pred CCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhc--CCCCCC-eEEEeCCCCh
Q 023007 129 PGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT--TLNSGD-SIVQNGATSI 200 (288)
Q Consensus 129 ~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~--~~~~g~-~vlI~g~~g~ 200 (288)
+||+|+++.. ..|++++|+.++.+.++++|+++++.+++.++..+.+||+++.... .+.+|+ +|+|+|++|.
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~ 157 (323)
T TIGR02823 78 EGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGG 157 (323)
T ss_pred CCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcH
Confidence 9999998751 2589999999999999999999999999999999999998876543 388898 9999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF 280 (288)
Q Consensus 201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~ 280 (288)
+|++++++|+.+|+++++++ .++++.+.++++|++++++.++... .+..++++ ++|+++||+|++..+.++++
T Consensus 158 vg~~~~~la~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~d~vld~~g~~~~~~~~~~ 230 (323)
T TIGR02823 158 VGSLAVAILSKLGYEVVAST----GKAEEEDYLKELGASEVIDREDLSP-PGKPLEKE--RWAGAVDTVGGHTLANVLAQ 230 (323)
T ss_pred HHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHhcCCcEEEccccHHH-HHHHhcCC--CceEEEECccHHHHHHHHHH
Confidence 99999999999999999888 4677778899999999888765332 34445444 49999999998877999999
Q ss_pred ccCCCeeC
Q 023007 281 LRFREEQW 288 (288)
Q Consensus 281 l~~~G~~v 288 (288)
++++|+|+
T Consensus 231 l~~~G~~v 238 (323)
T TIGR02823 231 LKYGGAVA 238 (323)
T ss_pred hCCCCEEE
Confidence 99999985
No 63
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=5.4e-32 Score=246.49 Aligned_cols=229 Identities=23% Similarity=0.246 Sum_probs=196.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++++.+++. +++++++.|.+ .+++|+||+.++++|++|...+.|.++. .++|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~ 75 (386)
T cd08283 1 MKALVWHGKGD----VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEVGPEVRN 75 (386)
T ss_pred CeeEEEecCCC----ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEeCCCCCC
Confidence 68899986643 88999999887 4999999999999999999999887654 356889999999999999999999
Q ss_pred CCCCCEEEecCC----------------------------------------------CCcccceEEEeeCC--cEEEcC
Q 023007 127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQS--VWHKVS 158 (288)
Q Consensus 127 ~~~Gd~V~~~~~----------------------------------------------~~G~~a~~~~~~~~--~l~~ip 158 (288)
+++||+|++.+. ..|++++|++++.+ .++++|
T Consensus 76 ~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 76 LKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECC
Confidence 999999988531 14889999999987 899999
Q ss_pred CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCC
Q 023007 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG 237 (288)
Q Consensus 159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g 237 (288)
+++++.+++.++..+++||+++ ..+.+.+|++|+|+|+ |.+|++++++|+.+|+. ++++. .++++.+.+++++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~----~~~~~~~~~~~~~ 229 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAID----RVPERLEMARSHL 229 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcC
Confidence 9999999999999999999999 6789999999999976 99999999999999984 77776 5789999999885
Q ss_pred CCEEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcc----------------------cHHHHHhhccCCCeeC
Q 023007 238 ADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGN----------------------SASKVLKFLRFREEQW 288 (288)
Q Consensus 238 ~~~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~----------------------~~~~a~~~l~~~G~~v 288 (288)
...++++... ..+.+..++++.+ +|++|||+|++ ..+.++++++++|+++
T Consensus 230 ~~~vi~~~~~~~~~~~l~~~~~~~~-~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv 303 (386)
T cd08283 230 GAETINFEEVDDVVEALRELTGGRG-PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVS 303 (386)
T ss_pred CcEEEcCCcchHHHHHHHHHcCCCC-CCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEE
Confidence 4467776654 4566777777765 99999999864 3488899999999985
No 64
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.2e-32 Score=238.69 Aligned_cols=230 Identities=27% Similarity=0.310 Sum_probs=198.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++.+.+.+... .+++.+.+.|.+.++||+||+.++++|+.|+....+..+. ...|.++|||++|+|+++|. .++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~ 76 (320)
T cd08243 1 MKAIVIEQPGGPE-VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTF 76 (320)
T ss_pred CeEEEEcCCCCcc-ceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCC
Confidence 5788888776542 3777888887889999999999999999999988776533 24578899999999999995 579
Q ss_pred CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHH
Q 023007 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202 (288)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG 202 (288)
++||+|+++.. ..|+|++|+.++...++++|+++++.+++.++.++.+||+++.....+++|++|+|+|++|.+|
T Consensus 77 ~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g 156 (320)
T cd08243 77 TPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVG 156 (320)
T ss_pred CCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHH
Confidence 99999998753 2489999999999999999999999999999999999999999888899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282 (288)
Q Consensus 203 ~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~ 282 (288)
++++++|+.+|++++.++ .++++.+.++++|++++++......+.+.++ +.+ +|+++||+|+.....++++++
T Consensus 157 ~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~~-~d~vl~~~~~~~~~~~~~~l~ 229 (320)
T cd08243 157 LAALKLAKALGATVTATT----RSPERAALLKELGADEVVIDDGAIAEQLRAA--PGG-FDKVLELVGTATLKDSLRHLR 229 (320)
T ss_pred HHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEecCccHHHHHHHh--CCC-ceEEEECCChHHHHHHHHHhc
Confidence 999999999999999988 5788889999999998876544444566666 444 999999999977799999999
Q ss_pred CCCeeC
Q 023007 283 FREEQW 288 (288)
Q Consensus 283 ~~G~~v 288 (288)
++|+|+
T Consensus 230 ~~g~~v 235 (320)
T cd08243 230 PGGIVC 235 (320)
T ss_pred cCCEEE
Confidence 999985
No 65
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=5.9e-32 Score=244.57 Aligned_cols=230 Identities=26% Similarity=0.342 Sum_probs=197.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
+|++++.+.+.. +++++.+.|.+.+++|+|++.++++|+.|++.+.+.... ..|.++|||++|+|+++|++++++
T Consensus 1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~ 75 (365)
T cd05279 1 CKAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTL 75 (365)
T ss_pred CceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccC
Confidence 367778776654 788999999999999999999999999999988876543 457899999999999999999999
Q ss_pred CCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCCC
Q 023007 128 APGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD 160 (288)
Q Consensus 128 ~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~~ 160 (288)
++||+|++.+. ..|+|++|+.++.+.++++|++
T Consensus 76 ~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 155 (365)
T cd05279 76 KPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPD 155 (365)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCC
Confidence 99999998632 1368999999999999999999
Q ss_pred CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240 (288)
Q Consensus 161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~ 240 (288)
+++.+++.+..++.+||+++...+++++|++|+|+|+ |++|++++++|+.+|+++++++. .++++.+.++++|+++
T Consensus 156 ~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~ 231 (365)
T cd05279 156 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD---INKDKFEKAKQLGATE 231 (365)
T ss_pred CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCe
Confidence 9999999999999999999888899999999999975 99999999999999997544442 4788899999999999
Q ss_pred EEeCCcc---cHHHHHHHhcCCCCccEEEECCCc-ccHHHHHhhcc-CCCeeC
Q 023007 241 VFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLR-FREEQW 288 (288)
Q Consensus 241 v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~-~~G~~v 288 (288)
+++++.. ..+.+.++++ .+ +|++|||+|. .....++++++ ++|+++
T Consensus 232 ~v~~~~~~~~~~~~l~~~~~-~~-~d~vid~~g~~~~~~~~~~~l~~~~G~~v 282 (365)
T cd05279 232 CINPRDQDKPIVEVLTEMTD-GG-VDYAFEVIGSADTLKQALDATRLGGGTSV 282 (365)
T ss_pred ecccccccchHHHHHHHHhC-CC-CcEEEECCCCHHHHHHHHHHhccCCCEEE
Confidence 9987654 2355677774 34 9999999986 44589999999 999875
No 66
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.1e-31 Score=241.50 Aligned_cols=230 Identities=25% Similarity=0.297 Sum_probs=194.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--------CCCCCcccccceEEEEEE
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RPKVPAVGGYEGVGEVYS 119 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~ 119 (288)
||+++++++++ +++++.+.|++.+++|+||+.++++|+.|...+.|.... ..+.|.++|||++|+|++
T Consensus 1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~ 76 (350)
T cd08256 1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76 (350)
T ss_pred CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence 68999987764 889999999999999999999999999999888775311 013567899999999999
Q ss_pred ecCCCC--CCCCCCEEEecC----------------------------CCCcccceEEEeeCC-cEEEcCCCCChhhhcc
Q 023007 120 VGSAVT--RLAPGDWVIPSP----------------------------PSSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT 168 (288)
Q Consensus 120 ~G~~~~--~~~~Gd~V~~~~----------------------------~~~G~~a~~~~~~~~-~l~~ip~~~~~~~aa~ 168 (288)
+|++++ +|++||+|++.+ ...|+|++|+.++.+ .++++|+++++.+++.
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 999998 899999999721 125899999999987 5789999999999998
Q ss_pred cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-
Q 023007 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL- 247 (288)
Q Consensus 169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~- 247 (288)
+ .++.++|+++ ...++++|++|+|.|+ |++|++++++|+.+|++++.+++ .++++.+.++++|++++++++..
T Consensus 157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~v~~~~~~~ 230 (350)
T cd08256 157 I-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLD---LKDERLALARKFGADVVLNPPEVD 230 (350)
T ss_pred h-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc---CCHHHHHHHHHcCCcEEecCCCcC
Confidence 8 7899999998 6689999999999555 99999999999999997665553 47888888899999999887654
Q ss_pred cHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 248 ~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
..+.+.+++++.+ +|++|||+|+. ....++++++++|+++
T Consensus 231 ~~~~~~~~~~~~~-vdvvld~~g~~~~~~~~~~~l~~~G~~v 271 (350)
T cd08256 231 VVEKIKELTGGYG-CDIYIEATGHPSAVEQGLNMIRKLGRFV 271 (350)
T ss_pred HHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence 4567778887766 99999999964 4588999999999985
No 67
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.2e-31 Score=240.35 Aligned_cols=228 Identities=24% Similarity=0.292 Sum_probs=196.7
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++++++. +.+++.+.|++.+++|+|++.++++|+.|+..+.+.+. .+..|.++|+|++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~ 75 (343)
T cd08235 1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF 75 (343)
T ss_pred CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCC
Confidence 58899988764 88999999889999999999999999999998887653 22446789999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCc-----EEEcCCCCChhhhcccccchHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSV-----WHKVSKDSPMEYAATIIVNPLTA 176 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~-----l~~ip~~~~~~~aa~l~~~~~ta 176 (288)
++||+|++++. ..|+|++|+.++... ++++|+++++.+++.+ .++.+|
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a 154 (343)
T cd08235 76 KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACC 154 (343)
T ss_pred CCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHH
Confidence 99999998632 258999999999988 9999999999998876 688999
Q ss_pred HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHH
Q 023007 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG 254 (288)
Q Consensus 177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~ 254 (288)
|+++.. .++++|++|+|+|+ |++|++++++|+..|++ +++++ .++++.+.++++|.++++++++.. .+.+.+
T Consensus 155 ~~~l~~-~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~ 228 (343)
T cd08235 155 INAQRK-AGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSD----LNEFRLEFAKKLGADYTIDAAEEDLVEKVRE 228 (343)
T ss_pred HHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEecCCccCHHHHHHH
Confidence 999966 48999999999975 99999999999999999 77776 578888888899999999887654 456777
Q ss_pred HhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 255 LLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
++++.+ +|++|||.++. ....++++++++|+|+
T Consensus 229 ~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~g~~v 262 (343)
T cd08235 229 LTDGRG-ADVVIVATGSPEAQAQALELVRKGGRIL 262 (343)
T ss_pred HhCCcC-CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence 777765 99999999976 4588999999999985
No 68
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.5e-31 Score=239.97 Aligned_cols=229 Identities=26% Similarity=0.317 Sum_probs=201.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||+|++.+++.+ +++++.+.|.+.+++|+|++.++++|+.|+..+.|..+. ...|.++|+|++|+|+.+|+++++|
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~ 76 (345)
T cd08260 1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRW 76 (345)
T ss_pred CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccC
Confidence 799999988765 788899999999999999999999999999988886553 2557899999999999999999999
Q ss_pred CCCCEEEe---------------------------cCCCCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHHHHH
Q 023007 128 APGDWVIP---------------------------SPPSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALR 178 (288)
Q Consensus 128 ~~Gd~V~~---------------------------~~~~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ta~~ 178 (288)
++||+|++ +. ..|+|++|+.++.. +++++|+++++.+++.++.++++||+
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~ 155 (345)
T cd08260 77 RVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFR 155 (345)
T ss_pred CCCCEEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHH
Confidence 99999987 21 15899999999974 89999999999999999999999999
Q ss_pred HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-c-cHHHHHHHh
Q 023007 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLL 256 (288)
Q Consensus 179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~-~~~~i~~~~ 256 (288)
++....++.++++|+|+| +|++|++++++|+.+|+++++++ .++++.+.++++|++++++++. . ..+.+..++
T Consensus 156 ~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 230 (345)
T cd08260 156 ALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVD----IDDDKLELARELGAVATVNASEVEDVAAAVRDLT 230 (345)
T ss_pred HHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHhCCCEEEccccchhHHHHHHHHh
Confidence 998888899999999999 59999999999999999999998 5788889999999999999876 3 345677777
Q ss_pred cCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007 257 ANLPEPALGFNCVGG-NSASKVLKFLRFREEQW 288 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v 288 (288)
.+ + +|++|||+|+ .....++++++++|+++
T Consensus 231 ~~-~-~d~vi~~~g~~~~~~~~~~~l~~~g~~i 261 (345)
T cd08260 231 GG-G-AHVSVDALGIPETCRNSVASLRKRGRHV 261 (345)
T ss_pred CC-C-CCEEEEcCCCHHHHHHHHHHhhcCCEEE
Confidence 76 5 9999999996 44588999999999874
No 69
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=7e-32 Score=242.35 Aligned_cols=233 Identities=28% Similarity=0.302 Sum_probs=197.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCC--------C------CCCCCcccccc
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------V------RPKVPAVGGYE 112 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~--------~------~~~~p~~~G~e 112 (288)
||++++++.+++.+.+++++.+.|.+ .++||+|++.++++|++|...+.|... . ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 68899888887655688889999988 499999999999999999998877421 0 12457899999
Q ss_pred eEEEEEEecCCCCCCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC--
Q 023007 113 GVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-- 188 (288)
Q Consensus 113 ~~G~V~~~G~~~~~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-- 188 (288)
++|+|+.+|+++++|++||+|+++.. ..|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+.+.+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 99999999999999999999998752 25899999999999999999999999999999999999999988777754
Q ss_pred --CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 189 --GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 189 --g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
|++|+|+|++|++|++++++++.+|++++++++ + ++.+.++++|.+++++.+.... ...++.+.+ +|++|
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~----~-~~~~~~~~~g~~~~~~~~~~~~--~~~l~~~~~-vd~vi 232 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS----T-DAIPLVKSLGADDVIDYNNEDF--EEELTERGK-FDVIL 232 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC----c-chHHHHHHhCCceEEECCChhH--HHHHHhcCC-CCEEE
Confidence 999999999999999999999999999988772 3 4677888999998888765332 222233334 99999
Q ss_pred ECCCcccHHHHHhhccCCCeeC
Q 023007 267 NCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 267 d~~g~~~~~~a~~~l~~~G~~v 288 (288)
||+|+.....++++++++|+++
T Consensus 233 ~~~g~~~~~~~~~~l~~~G~~v 254 (350)
T cd08248 233 DTVGGDTEKWALKLLKKGGTYV 254 (350)
T ss_pred ECCChHHHHHHHHHhccCCEEE
Confidence 9999987799999999999985
No 70
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.7e-31 Score=238.92 Aligned_cols=227 Identities=23% Similarity=0.340 Sum_probs=196.5
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||+++++.++. +++.+.+.|.+.++|++|+|.++++|+.|+....+.++.. ..|.++|+|++|+|+.+|+++++|
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 75 (337)
T cd08261 1 MKALVCEKPGR----LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGL 75 (337)
T ss_pred CeEEEEeCCCc----eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCC
Confidence 68888887653 8899999999999999999999999999999888765543 447789999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++... ..|+|++|+.++++ ++++|+++++.+++.+ ..++++++++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~- 152 (337)
T cd08261 76 KVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV- 152 (337)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-
Confidence 99999997321 25899999999999 9999999999998877 5778888887
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLP 260 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g 260 (288)
...++.+|++|||+|+ |.+|++++++|+.+|+++++++ .++++.++++++|++++++++... .+.+.+++++.+
T Consensus 153 ~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~----~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~ 227 (337)
T cd08261 153 RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVD----IDDERLEFARELGADDTINVGDEDVAARLRELTDGEG 227 (337)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEC----CCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC
Confidence 6789999999999975 8999999999999999999987 578888999999999999987653 466777777665
Q ss_pred CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 261 EPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|++|||.|+.. ...++++|+++|+++
T Consensus 228 -vd~vld~~g~~~~~~~~~~~l~~~G~~i 255 (337)
T cd08261 228 -ADVVIDATGNPASMEEAVELVAHGGRVV 255 (337)
T ss_pred -CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 999999998754 588999999999984
No 71
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.3e-31 Score=238.71 Aligned_cols=230 Identities=25% Similarity=0.232 Sum_probs=198.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++++.+++. +++++.+.|++ .++||+|++.++++|+.|...+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~ 75 (345)
T cd08286 1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTN 75 (345)
T ss_pred CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCccc
Confidence 68899988764 88999999885 79999999999999999999998875542 44789999999999999999999
Q ss_pred CCCCCEEEecCC---------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHHHH
Q 023007 127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTAL 177 (288)
Q Consensus 127 ~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ta~ 177 (288)
+++||+|++.+. ..|++++|+.++.+ .++++|++++..+++.++..+++||
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~ 155 (345)
T cd08286 76 FKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGY 155 (345)
T ss_pred cCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHH
Confidence 999999998541 12889999999987 8999999999999999999999999
Q ss_pred HHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHH
Q 023007 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGL 255 (288)
Q Consensus 178 ~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~ 255 (288)
+++....++.+|++|+|+|+ |.+|++++|+++.+| .+++++. .++++.+.++++|++.+++++.. ..+.+.++
T Consensus 156 ~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (345)
T cd08286 156 ECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVD----LDDNRLEVAKKLGATHTVNSAKGDAIEQVLEL 230 (345)
T ss_pred HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCceeccccccHHHHHHHH
Confidence 98777788999999999886 999999999999999 6777754 47788888899999999988754 34566777
Q ss_pred hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+++.+ +|++|||+|+... +.++++|+++|+|+
T Consensus 231 ~~~~~-~d~vld~~g~~~~~~~~~~~l~~~g~~v 263 (345)
T cd08286 231 TDGRG-VDVVIEAVGIPATFELCQELVAPGGHIA 263 (345)
T ss_pred hCCCC-CCEEEECCCCHHHHHHHHHhccCCcEEE
Confidence 77655 9999999987544 88889999999985
No 72
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.9e-32 Score=240.61 Aligned_cols=231 Identities=30% Similarity=0.409 Sum_probs=191.8
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCC---CCCcccccceEEE---EEEec
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---KVPAVGGYEGVGE---VYSVG 121 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~~G 121 (288)
++.+.+.....+.+....++.+.|.+.+++++|++.++++|+.|+.+..|.+.... .+|.+++.++.|+ +...|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g 84 (347)
T KOG1198|consen 5 IRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVG 84 (347)
T ss_pred cceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccc
Confidence 34455555555555577778899999999999999999999999999999887766 6775555555554 44445
Q ss_pred -CCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhc------CCCCCCeEEE
Q 023007 122 -SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT------TLNSGDSIVQ 194 (288)
Q Consensus 122 -~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~vlI 194 (288)
..+..+..||.+..... .|+|+||.++|...++++|+++++.++|++|.++.|||.++.... +.++|++|||
T Consensus 85 ~~~~~~~~~g~~~~~~~~-~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv 163 (347)
T KOG1198|consen 85 DDVVGGWVHGDAVVAFLS-SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV 163 (347)
T ss_pred cccccceEeeeEEeeccC-CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE
Confidence 33456778887777665 699999999999999999999999999999999999999999989 8999999999
Q ss_pred eCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcc
Q 023007 195 NGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGN 272 (288)
Q Consensus 195 ~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~ 272 (288)
+|++|++|++++|+|++.|+ ++++++ ++++.++++++|+++++||++.++ +.++..+ +.+ ||+||||+|+.
T Consensus 164 ~ggsggVG~~aiQlAk~~~~~~v~t~~-----s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~-~DvVlD~vg~~ 236 (347)
T KOG1198|consen 164 LGGSGGVGTAAIQLAKHAGAIKVVTAC-----SKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKG-VDVVLDCVGGS 236 (347)
T ss_pred EeCCcHHHHHHHHHHHhcCCcEEEEEc-----ccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCC-ccEEEECCCCC
Confidence 99999999999999999994 555554 889999999999999999998653 5666666 444 99999999998
Q ss_pred cHHHHHhhccCCCe
Q 023007 273 SASKVLKFLRFREE 286 (288)
Q Consensus 273 ~~~~a~~~l~~~G~ 286 (288)
....+..++..+|+
T Consensus 237 ~~~~~~~~l~~~g~ 250 (347)
T KOG1198|consen 237 TLTKSLSCLLKGGG 250 (347)
T ss_pred ccccchhhhccCCc
Confidence 77778888777764
No 73
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.3e-31 Score=238.54 Aligned_cols=227 Identities=29% Similarity=0.332 Sum_probs=197.0
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++++.+. +.+++.+.|++.++||+||+.++++|+.|+..+.+.+.. ..|.++|+|++|+|+.+|+++.+|
T Consensus 1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~ 74 (343)
T cd08236 1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDL 74 (343)
T ss_pred CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcC
Confidence 68999998754 788999999999999999999999999999888776522 346889999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++++. ..|+|++|+.++.+.++++|+++++.+++.+ ..+++||+++.
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~ 153 (343)
T cd08236 75 AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR 153 (343)
T ss_pred CCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH
Confidence 99999998721 3589999999999999999999999999887 57889999986
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g 260 (288)
...++++++|+|+|+ |.+|++++++|+.+|++ +++++ .++++.++++++|.+.+++++....+.+..++++.+
T Consensus 154 -~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (343)
T cd08236 154 -LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVD----IDDEKLAVARELGADDTINPKEEDVEKVRELTEGRG 227 (343)
T ss_pred -hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCC
Confidence 688999999999975 99999999999999998 88877 567888888999999999887544566777777765
Q ss_pred CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 261 EPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|+++||.|+.. ...++++|+++|+++
T Consensus 228 -~d~vld~~g~~~~~~~~~~~l~~~G~~v 255 (343)
T cd08236 228 -ADLVIEAAGSPATIEQALALARPGGKVV 255 (343)
T ss_pred -CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 999999998754 489999999999984
No 74
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=5.2e-32 Score=242.53 Aligned_cols=230 Identities=29% Similarity=0.388 Sum_probs=198.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||+++++.++ + ..+++++.+.|++.++||+|++.++++|++|.....+.+ ....|.++|||++|+|+.+|+++++|
T Consensus 1 m~a~~~~~~~-~-~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPG-G-GLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCC-C-CcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence 6899999886 2 238888999999999999999999999999988765543 11346789999999999999999999
Q ss_pred CCCCEEEecCC-------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCC----------CCCC
Q 023007 128 APGDWVIPSPP-------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL----------NSGD 190 (288)
Q Consensus 128 ~~Gd~V~~~~~-------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~ 190 (288)
++||+|+++.. ..|++++|++++.+.++++|+++++.+++.+++++.+||+++.+..++ ++++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~ 156 (339)
T cd08249 77 KVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK 156 (339)
T ss_pred CCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence 99999999853 248999999999999999999999999999999999999998776554 7899
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV 269 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~ 269 (288)
+|+|+|++|.+|++++++++.+|++++.++ ++++.+.++++|++++++++... .+.+.+++++ ++|++||++
T Consensus 157 ~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~--~~d~vl~~~ 229 (339)
T cd08249 157 PVLIWGGSSSVGTLAIQLAKLAGYKVITTA-----SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGG--KLRYALDCI 229 (339)
T ss_pred EEEEEcChhHHHHHHHHHHHHcCCeEEEEE-----CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCC--CeeEEEEee
Confidence 999999999999999999999999998877 34777888999999999987643 4567666653 499999999
Q ss_pred Cc-ccHHHHHhhccC--CCeeC
Q 023007 270 GG-NSASKVLKFLRF--REEQW 288 (288)
Q Consensus 270 g~-~~~~~a~~~l~~--~G~~v 288 (288)
|+ .....+++++++ +|+++
T Consensus 230 g~~~~~~~~~~~l~~~~~g~~v 251 (339)
T cd08249 230 STPESAQLCAEALGRSGGGKLV 251 (339)
T ss_pred ccchHHHHHHHHHhccCCCEEE
Confidence 98 556999999999 99875
No 75
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.8e-31 Score=237.01 Aligned_cols=234 Identities=25% Similarity=0.300 Sum_probs=200.9
Q ss_pred ceEEEEccCCCCCc--ceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~--~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||++++++++++.. .+++++.+.|.+.+++|+|++.++++|+.|+..+.+..+. ...|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 58899999887541 3667778888889999999999999999999888776542 24567899999999999999999
Q ss_pred CCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC-----CCeEEEeCCC
Q 023007 126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT 198 (288)
Q Consensus 126 ~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~g~~ 198 (288)
+|++||+|+.... ..|+|++|+.++..+++++|+++++.+++.+++.+.+||+++.+.+.+.+ |++|+|+|++
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~ 159 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA 159 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence 9999999998742 35899999999999999999999999999999999999999888888887 9999999988
Q ss_pred ChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc-ccHHH
Q 023007 199 SIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK 276 (288)
Q Consensus 199 g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~ 276 (288)
|++|++++++++.+| +++++++ .++++.++++++|++++++++....+.+... .+.+ +|+++||+|+ .....
T Consensus 160 g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~-~d~vl~~~~~~~~~~~ 233 (336)
T cd08252 160 GGVGSIAIQLAKQLTGLTVIATA----SRPESIAWVKELGADHVINHHQDLAEQLEAL-GIEP-VDYIFCLTDTDQHWDA 233 (336)
T ss_pred chHHHHHHHHHHHcCCcEEEEEc----CChhhHHHHHhcCCcEEEeCCccHHHHHHhh-CCCC-CCEEEEccCcHHHHHH
Confidence 999999999999999 9999998 5778888999999999998875443455533 3334 9999999996 45699
Q ss_pred HHhhccCCCeeC
Q 023007 277 VLKFLRFREEQW 288 (288)
Q Consensus 277 a~~~l~~~G~~v 288 (288)
++++++++|+++
T Consensus 234 ~~~~l~~~g~~v 245 (336)
T cd08252 234 MAELIAPQGHIC 245 (336)
T ss_pred HHHHhcCCCEEE
Confidence 999999999985
No 76
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.5e-31 Score=237.92 Aligned_cols=227 Identities=23% Similarity=0.262 Sum_probs=188.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++. +++++.+.|.+.++|++||+.++++|++|...+.|.++.. ++|.++|||++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~ 75 (339)
T PRK10083 1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAA 75 (339)
T ss_pred CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccC
Confidence 68899988764 8899999999999999999999999999999888765432 468899999999999999999999
Q ss_pred CCCCEEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|+..+ ...|+|++|+.++..+++++|+++++..++ +..++.++|++ .
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~ 153 (339)
T PRK10083 76 RIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-T 153 (339)
T ss_pred CCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-H
Confidence 9999998421 114899999999999999999999998876 45577788854 4
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL 259 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~ 259 (288)
...++++|++|+|+|+ |++|++++|+|+. +|++++.+++ .++++.+.++++|++++++++.... +.+.. .+.
T Consensus 154 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~---~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~ 227 (339)
T PRK10083 154 GRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVAD---RIDERLALAKESGADWVINNAQEPLGEALEE--KGI 227 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEc---CCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCC
Confidence 5688999999999995 9999999999996 6997655553 4788999999999999998876432 33322 222
Q ss_pred CCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+ +|++|||+|+.. ...++++++++|+++
T Consensus 228 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v 256 (339)
T PRK10083 228 K-PTLIIDAACHPSILEEAVTLASPAARIV 256 (339)
T ss_pred C-CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 2 679999999654 599999999999985
No 77
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.6e-31 Score=237.06 Aligned_cols=229 Identities=23% Similarity=0.279 Sum_probs=191.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC----------CCCCCCcccccceEEEE
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP----------VRPKVPAVGGYEGVGEV 117 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V 117 (288)
||++++... . +++++.+.|++.+++|+|++.++++|+.|+..+.|... .....|.++|+|++|+|
T Consensus 1 m~a~~~~~~-~----~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 75 (341)
T cd08262 1 MRAAVFRDG-P----LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75 (341)
T ss_pred CceEEEeCC-c----eEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence 688888765 2 88999999999999999999999999999998877321 11234778999999999
Q ss_pred EEecCCCCC-CCCCCEEEecCC----------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 118 YSVGSAVTR-LAPGDWVIPSPP----------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 118 ~~~G~~~~~-~~~Gd~V~~~~~----------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
+++|+++++ |++||+|++++. ..|+|++|+.++.+.++++|+++++.+++ ++.++.+||+++
T Consensus 76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~ 154 (341)
T cd08262 76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV 154 (341)
T ss_pred EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence 999999987 999999998732 25899999999999999999999999877 566888999985
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH----HHHHHHh
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLL 256 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~----~~i~~~~ 256 (288)
..+++++|++|+|+|+ |++|.+++|+++.+|++++.+++ .++++.+.++++|++++++++.... ..+..++
T Consensus 155 -~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 229 (341)
T cd08262 155 -RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASD---FSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229 (341)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC---CCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHh
Confidence 6689999999999986 99999999999999998666553 4788889999999999998765421 1244455
Q ss_pred cCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 257 ANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
.+.+ +|+++||+|+. ....++++++++|+++
T Consensus 230 ~~~~-~d~vid~~g~~~~~~~~~~~l~~~g~~v 261 (341)
T cd08262 230 GGPK-PAVIFECVGAPGLIQQIIEGAPPGGRIV 261 (341)
T ss_pred CCCC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence 5554 99999999985 5588999999999985
No 78
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=3.6e-31 Score=237.24 Aligned_cols=227 Identities=25% Similarity=0.274 Sum_probs=193.7
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCC-CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++++.+++. +++++++.|++. ++||+|++.++++|+.|.....|.++. ..|.++|+|++|+|+++|+++++
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~ 74 (344)
T cd08284 1 MKAVVFKGPGD----VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRT 74 (344)
T ss_pred CeeEEEecCCC----ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCccc
Confidence 67889887643 889999999875 999999999999999999888776553 34788999999999999999999
Q ss_pred CCCCCEEEecCC------------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhcccccchH
Q 023007 127 LAPGDWVIPSPP------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPL 174 (288)
Q Consensus 127 ~~~Gd~V~~~~~------------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ 174 (288)
+++||+|++.+. ..|++++|+.++.+ .++++|+++++.+++.++.+++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ 154 (344)
T cd08284 75 LKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP 154 (344)
T ss_pred cCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence 999999998641 13889999999965 9999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHH
Q 023007 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNV 252 (288)
Q Consensus 175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i 252 (288)
|||+++.. .++.+|++|+|+|+ |.+|++++++|+.+|+ +++++. .++++.+.++++|+. .++.+.. +.+.+
T Consensus 155 ta~~~~~~-~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~-~~~~~~~~~~~~l 227 (344)
T cd08284 155 TGYFGAKR-AQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVD----PVPERLERAAALGAE-PINFEDAEPVERV 227 (344)
T ss_pred HHHhhhHh-cCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEc----CCHHHHHHHHHhCCe-EEecCCcCHHHHH
Confidence 99999965 78999999999975 9999999999999997 777775 578888888999975 4555443 44667
Q ss_pred HHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
.+++++.+ +|++|||+|+.. ...++++++++|+||
T Consensus 228 ~~~~~~~~-~dvvid~~~~~~~~~~~~~~l~~~g~~v 263 (344)
T cd08284 228 REATEGRG-ADVVLEAVGGAAALDLAFDLVRPGGVIS 263 (344)
T ss_pred HHHhCCCC-CCEEEECCCCHHHHHHHHHhcccCCEEE
Confidence 77777665 999999999754 499999999999985
No 79
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=5e-31 Score=235.43 Aligned_cols=232 Identities=25% Similarity=0.256 Sum_probs=201.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++.+...+.+. +.+.+.+.|.+.+++|+|++.++++|+.|.....|.++.....|.++|+|++|+|+.+|++++++
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGL--LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCc--eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccC
Confidence 6889998888753 57788888889999999999999999999999888776444567889999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++.+. ..|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~ 158 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVV 158 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 99999987210 1489999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLP 260 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g 260 (288)
...+++++++|||.|+ |.+|++++++|+.+|++++.++ .++++.+.++++|.+++++.+.... +.+ ..+.+.+
T Consensus 159 ~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 232 (338)
T cd08254 159 RAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVD----IKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGG 232 (338)
T ss_pred hccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCC
Confidence 8888999999999865 9999999999999999998887 5788889999999999988776543 334 5555554
Q ss_pred CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 261 EPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|+++||+|... ...++++|+++|+|+
T Consensus 233 -~D~vid~~g~~~~~~~~~~~l~~~G~~v 260 (338)
T cd08254 233 -FDVIFDFVGTQPTFEDAQKAVKPGGRIV 260 (338)
T ss_pred -ceEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 999999998654 589999999999985
No 80
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.2e-31 Score=233.94 Aligned_cols=234 Identities=28% Similarity=0.306 Sum_probs=204.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||+++++..+.. +.+++++.+.|.+.++|++|++.++++|+.|+....|.++.....|.++|||++|+|+++|+++.+|
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (336)
T cd08276 1 MKAWRLSGGGGL-DNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRF 79 (336)
T ss_pred CeEEEEeccCCC-cceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCC
Confidence 789999877433 2378888888888999999999999999999998887665544567889999999999999999999
Q ss_pred CCCCEEEecCC--------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCC
Q 023007 128 APGDWVIPSPP--------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN 187 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 187 (288)
++||+|++... ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++...+.++
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 159 (336)
T cd08276 80 KVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK 159 (336)
T ss_pred CCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCC
Confidence 99999998751 1478999999999999999999999999999999999999998888999
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-c-cHHHHHHHhcCCCCccEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLANLPEPALG 265 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~-~~~~i~~~~~~~g~~D~v 265 (288)
+|++|+|+| +|++|++++++++.+|++++.++ .++++.+.++++|.+.+++.+. . ..+.+..++++.+ +|++
T Consensus 160 ~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 233 (336)
T cd08276 160 PGDTVLVQG-TGGVSLFALQFAKAAGARVIATS----SSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG-VDHV 233 (336)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC-CcEE
Confidence 999999996 59999999999999999999988 5788888888899999998765 3 4466777777666 9999
Q ss_pred EECCCcccHHHHHhhccCCCeeC
Q 023007 266 FNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 266 ~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+||+++.....++++++++|+++
T Consensus 234 i~~~~~~~~~~~~~~l~~~G~~v 256 (336)
T cd08276 234 VEVGGPGTLAQSIKAVAPGGVIS 256 (336)
T ss_pred EECCChHHHHHHHHhhcCCCEEE
Confidence 99999877799999999999985
No 81
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.7e-31 Score=236.66 Aligned_cols=227 Identities=20% Similarity=0.196 Sum_probs=192.8
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++.. ..+++.|.|.+.++||+||+.++++|++|...+.|..+. ..|.++|||++|+|+++|+++.+|
T Consensus 1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~ 75 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSL 75 (338)
T ss_pred CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccC
Confidence 789999987763 237888999999999999999999999999988776543 236789999999999999999999
Q ss_pred CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
++||+|++.+ ...|++++|+.++.++++++|+++++.+++.++.++.|||+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 76 KVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 9999998621 0148999999999999999999999999999999999999998
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc--ccHHHHHHHhc
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--LEVKNVKGLLA 257 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~i~~~~~ 257 (288)
..+++++|++|+|+|+ |++|++++++++. .|+++++++ .++++.+.++++|.+.+++++. ...+.+.++++
T Consensus 156 -~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~ 229 (338)
T PRK09422 156 -KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVD----INDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG 229 (338)
T ss_pred -HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEe----CChHHHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence 5688999999999995 9999999999998 499999998 5888999999999999998854 23455666655
Q ss_pred CCCCccE-EEECCCcccHHHHHhhccCCCeeC
Q 023007 258 NLPEPAL-GFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~-v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+ +|. ++++.++.....++++++++|+|+
T Consensus 230 --~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v 258 (338)
T PRK09422 230 --G-AHAAVVTAVAKAAFNQAVDAVRAGGRVV 258 (338)
T ss_pred --C-CcEEEEeCCCHHHHHHHHHhccCCCEEE
Confidence 3 885 455555555699999999999985
No 82
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-31 Score=237.81 Aligned_cols=226 Identities=24% Similarity=0.291 Sum_probs=197.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++++++++ +++++.|.|.+.++|++|++.++++|+.|+....|..+. ..+|..+|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~ 76 (334)
T PRK13771 1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGF 76 (334)
T ss_pred CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccC
Confidence 689999988863 889999999999999999999999999999888776543 2457889999999999999999889
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.
T Consensus 77 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 77 KPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999998741 1589999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
.. .+.++++|+|+|++|.+|++++++++.+|++++.++ .++++.+.++++ ++++++++ ...+.+.++ + +
T Consensus 157 ~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~----~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~--~--~ 225 (334)
T PRK13771 157 RA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT----SSESKAKIVSKY-ADYVIVGS-KFSEEVKKI--G--G 225 (334)
T ss_pred hc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHH-HHHhcCch-hHHHHHHhc--C--C
Confidence 76 899999999999999999999999999999999888 578888888888 77777765 333455554 2 3
Q ss_pred ccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 262 PALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 262 ~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+|+++||+|+.....++++++++|+++
T Consensus 226 ~d~~ld~~g~~~~~~~~~~l~~~G~~v 252 (334)
T PRK13771 226 ADIVIETVGTPTLEESLRSLNMGGKII 252 (334)
T ss_pred CcEEEEcCChHHHHHHHHHHhcCCEEE
Confidence 999999999987799999999999975
No 83
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=6.3e-31 Score=234.07 Aligned_cols=227 Identities=29% Similarity=0.331 Sum_probs=197.9
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++..+++ .+.+++.|.|.+.+++|+|++.++++|++|+..+.|..+. ...|.++|+|++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~---~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~ 76 (332)
T cd08259 1 MKAAILHKPNK---PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERF 76 (332)
T ss_pred CeEEEEecCCC---ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccC
Confidence 68889876433 2888899999999999999999999999999998886554 2457899999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|+++.. ..|++++|++++...++++|+++++.+++.++.++.+||+++.
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~ 156 (332)
T cd08259 77 KPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK 156 (332)
T ss_pred CCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence 99999998752 1489999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
. ..+.++++++|+|++|.+|++++++++..|++++.++ .++++.+.+++++.+.+++.++ ..+.+.+.. +
T Consensus 157 ~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~- 226 (332)
T cd08259 157 R-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT----RSPEKLKILKELGADYVIDGSK-FSEDVKKLG---G- 226 (332)
T ss_pred H-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCcEEEecHH-HHHHHHhcc---C-
Confidence 7 8899999999999999999999999999999999888 5677888888899888887655 334444432 3
Q ss_pred ccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 262 PALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 262 ~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+|+++||+|......++++++++|+++
T Consensus 227 ~d~v~~~~g~~~~~~~~~~~~~~g~~v 253 (332)
T cd08259 227 ADVVIELVGSPTIEESLRSLNKGGRLV 253 (332)
T ss_pred CCEEEECCChHHHHHHHHHhhcCCEEE
Confidence 999999999888899999999999985
No 84
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=8.8e-31 Score=231.57 Aligned_cols=235 Identities=27% Similarity=0.357 Sum_probs=205.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++...+.+ ..+.+.+.+.|.+.+++++|++.++++|+.|...+.|..+.....|.++|||++|+|+.+|+++++|
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 1 MRAIRYHEFGAP-DVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred CceEEEcccCCc-ccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCC
Confidence 578888876643 3378889999999999999999999999999988877654444567899999999999999999999
Q ss_pred CCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007 128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (288)
Q Consensus 128 ~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~ 203 (288)
++||+|++... ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++....++.+|++++|+|+++++|+
T Consensus 80 ~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~ 159 (325)
T cd08253 80 KVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGH 159 (325)
T ss_pred CCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHH
Confidence 99999999862 15899999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282 (288)
Q Consensus 204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~ 282 (288)
+++++++.+|++++.++ .++++.+.++++|.+.+++.... ..+.+.+++.+.+ +|+++||.|+......+++++
T Consensus 160 ~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~ 234 (325)
T cd08253 160 AAVQLARWAGARVIATA----SSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQG-VDVIIEVLANVNLAKDLDVLA 234 (325)
T ss_pred HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCc-eEEEEECCchHHHHHHHHhhC
Confidence 99999999999999988 56788888889999988887654 3456767666655 999999999988888999999
Q ss_pred CCCeeC
Q 023007 283 FREEQW 288 (288)
Q Consensus 283 ~~G~~v 288 (288)
++|+++
T Consensus 235 ~~g~~v 240 (325)
T cd08253 235 PGGRIV 240 (325)
T ss_pred CCCEEE
Confidence 999875
No 85
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5.2e-31 Score=234.44 Aligned_cols=224 Identities=28% Similarity=0.378 Sum_probs=191.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++ . +.+++++.+.|++.++||+||+.++++|++|...+.+. .. ..+|.++|||++|+|+.+|+++++|
T Consensus 1 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (325)
T cd08264 1 MKALVFEKSG-I-ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVEEVGDHVKGV 76 (325)
T ss_pred CeeEEeccCC-C-CceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEEEECCCCCCC
Confidence 6889887766 2 34888888888899999999999999999999887642 11 1346789999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++.+. ..|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.
T Consensus 77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~ 156 (325)
T cd08264 77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK 156 (325)
T ss_pred CCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 99999997632 2489999999999999999999999999999999999999987
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
. .++++|++|+|+|++|.+|++++++|+.+|++++.++ . .+.++++|+++++++++. .+.+.+++ + +
T Consensus 157 ~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~----~----~~~~~~~g~~~~~~~~~~-~~~l~~~~-~--~ 223 (325)
T cd08264 157 T-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS----R----KDWLKEFGADEVVDYDEV-EEKVKEIT-K--M 223 (325)
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEe----H----HHHHHHhCCCeeecchHH-HHHHHHHh-C--C
Confidence 6 8999999999999999999999999999999988876 1 256678999999887653 34566666 3 4
Q ss_pred ccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 262 PALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 262 ~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+|+++||+|+.....++++|+++|+|+
T Consensus 224 ~d~vl~~~g~~~~~~~~~~l~~~g~~v 250 (325)
T cd08264 224 ADVVINSLGSSFWDLSLSVLGRGGRLV 250 (325)
T ss_pred CCEEEECCCHHHHHHHHHhhccCCEEE
Confidence 999999999876799999999999985
No 86
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.2e-30 Score=230.45 Aligned_cols=232 Identities=24% Similarity=0.350 Sum_probs=195.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||+++.++.+. ..+++++++.|.+.+++|+|++.++++|+.|...+.+.+.. ...|.++|+|++|+|+.+|++++.|
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 77 (306)
T cd08258 1 MKALVKTGPGP--GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGW 77 (306)
T ss_pred CeeEEEecCCC--CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcC
Confidence 57888876442 33889999999999999999999999999999888876522 2346889999999999999999999
Q ss_pred CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
++||+|++... ..|+|++|++++...++++|+++++.+++ ++.++.++|+++
T Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l 156 (306)
T cd08258 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAV 156 (306)
T ss_pred CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHH
Confidence 99999998652 14899999999999999999999999887 677889999999
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCC
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL 259 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~ 259 (288)
...+.+++|++|+|.| +|.+|++++++|+.+|++++.+... .++++.+.++++|++++ +++... .+.+..++++.
T Consensus 157 ~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 157 AERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTE--KDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 8889999999999977 5999999999999999998776322 35667788899999888 776543 35566666665
Q ss_pred CCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
+ +|+++||.|+. ....++++|+++|+|+
T Consensus 233 ~-vd~vld~~g~~~~~~~~~~~l~~~G~~v 261 (306)
T cd08258 233 G-ADVVIECSGAVPALEQALELLRKGGRIV 261 (306)
T ss_pred C-CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence 5 99999999764 4488999999999985
No 87
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.2e-31 Score=230.57 Aligned_cols=219 Identities=25% Similarity=0.335 Sum_probs=189.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+.+ + ..+++++.+.|.+.++||+||+.++++|+.|.....+. ..|.++|||++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~-~-~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDA-P-LRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCC-C-ceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCC
Confidence 5889888765 3 34888899999999999999999999999998876521 225789999999999999999999
Q ss_pred CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (288)
Q Consensus 128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~ 207 (288)
++||+|+++.. .|+|++|+.++.++++++|+++++.+++.+++.+.+||+++...... +|++|+|+|++|++|+++++
T Consensus 74 ~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~ 151 (305)
T cd08270 74 AVGARVVGLGA-MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQ 151 (305)
T ss_pred CCCCEEEEecC-CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHH
Confidence 99999998753 58999999999999999999999999999999999999999876655 59999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ 287 (288)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~ 287 (288)
+++.+|++++.++ .++++.+.++++|++.+++... .+.++ ++|+++||+|+.....++++++++|++
T Consensus 152 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~-------~~~~~--~~d~vl~~~g~~~~~~~~~~l~~~G~~ 218 (305)
T cd08270 152 LAALAGAHVVAVV----GSPARAEGLRELGAAEVVVGGS-------ELSGA--PVDLVVDSVGGPQLARALELLAPGGTV 218 (305)
T ss_pred HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEeccc-------cccCC--CceEEEECCCcHHHHHHHHHhcCCCEE
Confidence 9999999999988 5788899999999876654332 12222 499999999998779999999999998
Q ss_pred C
Q 023007 288 W 288 (288)
Q Consensus 288 v 288 (288)
+
T Consensus 219 v 219 (305)
T cd08270 219 V 219 (305)
T ss_pred E
Confidence 5
No 88
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.4e-30 Score=231.34 Aligned_cols=230 Identities=22% Similarity=0.273 Sum_probs=193.5
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.++|++ +.+++++.|.|.+.++||+|++.++++|+.|...+.|..+.....|.++|||++|+|++ ++++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 1 FKALVLEKDDGG-TSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred CeeEEEeccCCC-cceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCC
Confidence 789999988876 44889999999999999999999999999999888776543334577899999999998 777889
Q ss_pred CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh--hcCCC-CCCeEEEeCCCC
Q 023007 128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLN-SGDSIVQNGATS 199 (288)
Q Consensus 128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~-~g~~vlI~g~~g 199 (288)
++||+|+++.. ..|+|++|+.++.+.++++|+++++.+++.++..+++++.++.. ..... +|++|+|+|++|
T Consensus 78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g 157 (324)
T cd08288 78 KPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAG 157 (324)
T ss_pred CCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCc
Confidence 99999998641 25899999999999999999999999999999999998877641 13444 678999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279 (288)
Q Consensus 200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~ 279 (288)
.+|++++++|+.+|+++++++ .++++.+.++++|+++++++++.. ..+..++++ ++|.++||++++....++.
T Consensus 158 ~vg~~~~~~A~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~--~~~~~~d~~~~~~~~~~~~ 230 (324)
T cd08288 158 GVGSVAVALLARLGYEVVAST----GRPEEADYLRSLGASEIIDRAELS-EPGRPLQKE--RWAGAVDTVGGHTLANVLA 230 (324)
T ss_pred HHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHhcCCCEEEEcchhh-HhhhhhccC--cccEEEECCcHHHHHHHHH
Confidence 999999999999999999988 578899999999999999887533 244455544 4899999999866678888
Q ss_pred hccCCCee
Q 023007 280 FLRFREEQ 287 (288)
Q Consensus 280 ~l~~~G~~ 287 (288)
+++.+|++
T Consensus 231 ~~~~~g~~ 238 (324)
T cd08288 231 QTRYGGAV 238 (324)
T ss_pred HhcCCCEE
Confidence 88888876
No 89
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-30 Score=230.78 Aligned_cols=234 Identities=26% Similarity=0.342 Sum_probs=204.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++.+. .+++++.+.|.+.+++|+|++.++++|+.|.....+........|.++|||++|+|+.+|+++.+|
T Consensus 1 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 1 MKALVLESFGGPE-VFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred CeEEEEccCCCch-heEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCC
Confidence 6899999887654 377888887788999999999999999999998877654333457889999999999999999999
Q ss_pred CCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007 128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (288)
Q Consensus 128 ~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~ 203 (288)
++||+|+++.. ..|++++|+.++.++++++|+++++..++.++..+.+||+++.+..++++|++++|+|++|.+|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~ 159 (326)
T cd08272 80 RVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH 159 (326)
T ss_pred CCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHH
Confidence 99999998752 14789999999999999999999999999999999999999888899999999999999899999
Q ss_pred HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF 283 (288)
Q Consensus 204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~ 283 (288)
+++++++.+|++++.++ .+ ++.++++++|.+.+++.+....+.+..++++.+ +|+++||.|+.....+++++++
T Consensus 160 ~~~~~a~~~g~~v~~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~ 233 (326)
T cd08272 160 VAVQLAKAAGARVYATA----SS-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRG-FDVVFDTVGGETLDASFEAVAL 233 (326)
T ss_pred HHHHHHHHcCCEEEEEe----ch-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCC-CcEEEECCChHHHHHHHHHhcc
Confidence 99999999999999887 45 778888899999888876554466777777766 9999999998777889999999
Q ss_pred CCeeC
Q 023007 284 REEQW 288 (288)
Q Consensus 284 ~G~~v 288 (288)
+|+++
T Consensus 234 ~g~~v 238 (326)
T cd08272 234 YGRVV 238 (326)
T ss_pred CCEEE
Confidence 99875
No 90
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.5e-30 Score=229.78 Aligned_cols=234 Identities=27% Similarity=0.358 Sum_probs=204.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++.+. .+++++.+.|.+.+++++||+.++++|+.|+..+.+.++....+|.++|||++|+|+++|+++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 1 MKAIVIKEPGGPE-VLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred CeEEEEecCCCcc-cceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCC
Confidence 6899998876543 377888888788999999999999999999998877655444567899999999999999999999
Q ss_pred CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (288)
Q Consensus 128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~ 207 (288)
++||+|+++.. .|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.....+.++++|+|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~ 158 (323)
T cd05276 80 KVGDRVCALLA-GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ 158 (323)
T ss_pred CCCCEEEEecC-CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence 99999998753 48999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE 286 (288)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~ 286 (288)
+++..|++++.+. .++++.+.++++|.+.+++.... ..+.+..++.+.+ +|++|||.|+.....++++++++|+
T Consensus 159 ~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~g~~~~~~~~~~~~~~g~ 233 (323)
T cd05276 159 LAKALGARVIATA----GSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRG-VDVILDMVGGDYLARNLRALAPDGR 233 (323)
T ss_pred HHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCC-eEEEEECCchHHHHHHHHhhccCCE
Confidence 9999999998887 56788888888999888887653 3355666666544 9999999998888889999999998
Q ss_pred eC
Q 023007 287 QW 288 (288)
Q Consensus 287 ~v 288 (288)
++
T Consensus 234 ~i 235 (323)
T cd05276 234 LV 235 (323)
T ss_pred EE
Confidence 74
No 91
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-30 Score=231.81 Aligned_cols=226 Identities=27% Similarity=0.309 Sum_probs=191.7
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++. +++.+.+.|++.++||+||+.++++|+.|+....|.++. .+|.++|+|++|+|+.+|+++++|
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~~vG~~v~~~ 74 (334)
T cd08234 1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVVAVGSKVTGF 74 (334)
T ss_pred CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEEEeCCCCCCC
Confidence 68899988764 889999999999999999999999999999988887653 357799999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++... ..|++++|+.++.++++++|+++++.+++.+ .++.++++++
T Consensus 75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l- 152 (334)
T cd08234 75 KVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL- 152 (334)
T ss_pred CCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-
Confidence 99999987211 2589999999999999999999999998766 6788999998
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g 260 (288)
..+++++|++|+|+|+ |.+|++++++|+.+|++ ++++. .++++.+.++++|.+.+++++......- .++.+.+
T Consensus 153 ~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 226 (334)
T cd08234 153 DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAE----PNEEKLELAKKLGATETVDPSREDPEAQ-KEDNPYG 226 (334)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCeEEecCCCCCHHHH-HHhcCCC
Confidence 6789999999999975 99999999999999998 66665 5788888889999988888765432222 4445444
Q ss_pred CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 261 EPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|++|||+|... ...++++|+++|+|+
T Consensus 227 -vd~v~~~~~~~~~~~~~~~~l~~~G~~v 254 (334)
T cd08234 227 -FDVVIEATGVPKTLEQAIEYARRGGTVL 254 (334)
T ss_pred -CcEEEECCCChHHHHHHHHHHhcCCEEE
Confidence 999999998654 488999999999984
No 92
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.9e-30 Score=231.08 Aligned_cols=229 Identities=26% Similarity=0.358 Sum_probs=197.0
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|++.+...+.+.. +++++.+.|.+.+++++|++.++++|+.|..++.+..+....+|.++|||++|+|+.+|+++++|+
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 2 REVVVTRRGGPEV-LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred eeEEEccCCCccc-EEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 7888888776643 889999999999999999999999999999988776544335678899999999999999999999
Q ss_pred CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007 129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (288)
Q Consensus 129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l 208 (288)
+||+|+++.. .|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.+.+.+.+|++|+|+|++|++|++++++
T Consensus 81 ~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~ 159 (331)
T cd08273 81 VGDRVAALTR-VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLEL 159 (331)
T ss_pred CCCEEEEeCC-CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 9999999864 389999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
++.+|++++.++ . +++.+.++++|... ++.+....... ....+ ++|+++||+|+.....++++++++|+++
T Consensus 160 a~~~g~~v~~~~----~-~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~~--~~d~vl~~~~~~~~~~~~~~l~~~g~~v 230 (331)
T cd08273 160 ALLAGAEVYGTA----S-ERNHAALRELGATP-IDYRTKDWLPA-MLTPG--GVDVVFDGVGGESYEESYAALAPGGTLV 230 (331)
T ss_pred HHHcCCEEEEEe----C-HHHHHHHHHcCCeE-EcCCCcchhhh-hccCC--CceEEEECCchHHHHHHHHHhcCCCEEE
Confidence 999999999888 4 77888888899754 34433222111 33333 4999999999988899999999999985
No 93
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.98 E-value=1.8e-30 Score=232.71 Aligned_cols=229 Identities=24% Similarity=0.222 Sum_probs=189.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||++.+.++++ .+++.+.|.|.+.++||+||+.++++|++|..++.+... .....|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~ 77 (341)
T PRK05396 1 MKALVKLKAEP---GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT 77 (341)
T ss_pred CceEEEecCCC---ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence 68899988774 389999999999999999999999999999987665321 1223567899999999999999999
Q ss_pred CCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007 126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (288)
Q Consensus 126 ~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~ 179 (288)
++++||+|++.+. ..|+|++|+.++.++++++|+++++.+++.+ .++.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~ 156 (341)
T PRK05396 78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT 156 (341)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence 9999999998621 2589999999999999999999999888754 466666665
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhc
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLA 257 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~ 257 (288)
+.. ...+|++|+|.|+ |++|++++++|+.+|++ ++++. .++++.++++++|++++++++... .+.+..+++
T Consensus 157 ~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T PRK05396 157 ALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITD----VNEYRLELARKMGATRAVNVAKEDLRDVMAELGM 229 (341)
T ss_pred HHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHhCCcEEecCccccHHHHHHHhcC
Confidence 543 3468999999875 99999999999999995 55554 578888999999999999887643 456777777
Q ss_pred CCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+.+ +|++|||.|+... +.++++++++|+++
T Consensus 230 ~~~-~d~v~d~~g~~~~~~~~~~~l~~~G~~v 260 (341)
T PRK05396 230 TEG-FDVGLEMSGAPSAFRQMLDNMNHGGRIA 260 (341)
T ss_pred CCC-CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 665 9999999987554 89999999999875
No 94
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.98 E-value=3.2e-30 Score=234.07 Aligned_cols=226 Identities=23% Similarity=0.238 Sum_probs=190.9
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++++.+++. +++++.|.|.+ .++|++||+.++++|+.|++.+.|..+. ..|.++|||++|+|+++|+++.+
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~ 74 (375)
T cd08282 1 MKAVVYGGPGN----VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVES 74 (375)
T ss_pred CceEEEecCCc----eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCc
Confidence 57888877653 88999999985 7999999999999999999998886652 45789999999999999999999
Q ss_pred CCCCCEEEecCC------------------------------------CCcccceEEEeeCC--cEEEcCCCCChh---h
Q 023007 127 LAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPME---Y 165 (288)
Q Consensus 127 ~~~Gd~V~~~~~------------------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~---~ 165 (288)
+++||+|++.+. ..|+|++|+.++.. .++++|+++++. .
T Consensus 75 ~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~ 154 (375)
T cd08282 75 LKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDD 154 (375)
T ss_pred CCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhh
Confidence 999999987221 13889999999976 899999999998 5
Q ss_pred hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTE 244 (288)
Q Consensus 166 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~ 244 (288)
++.+..++.+||+++ ..+.+++|++|+|.|+ |++|++++++++.+|+ +++++. .++++.+.++++|+ ..+++
T Consensus 155 ~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~----~~~~~~~~~~~~g~-~~v~~ 227 (375)
T cd08282 155 YLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVD----HVPERLDLAESIGA-IPIDF 227 (375)
T ss_pred eeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCC-eEecc
Confidence 678888899999998 6689999999999876 9999999999999998 677754 57888999999998 45666
Q ss_pred Ccc-cHHHHHHHhcCCCCccEEEECCCccc------------HHHHHhhccCCCeeC
Q 023007 245 SQL-EVKNVKGLLANLPEPALGFNCVGGNS------------ASKVLKFLRFREEQW 288 (288)
Q Consensus 245 ~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~------------~~~a~~~l~~~G~~v 288 (288)
++. ..+.+.++++ . ++|++|||+|++. +..++++++++|+++
T Consensus 228 ~~~~~~~~i~~~~~-~-~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 282 (375)
T cd08282 228 SDGDPVEQILGLEP-G-GVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIG 282 (375)
T ss_pred CcccHHHHHHHhhC-C-CCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEE
Confidence 543 3466777766 3 4999999999874 588899999999873
No 95
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.98 E-value=1.9e-30 Score=232.66 Aligned_cols=226 Identities=24% Similarity=0.282 Sum_probs=189.4
Q ss_pred EEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCC-CCC-CCCCCcccccceEEEEEEecCCCCCCC
Q 023007 51 VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPV-RPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 51 ~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
+++++... +.+++.+.|.+.++||+|++.++++|+.|...+.+. ... ....|.++|+|++|+|+++|+++++|+
T Consensus 2 ~~~~~~~~----~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (343)
T cd05285 2 AVLHGPGD----LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK 77 (343)
T ss_pred ceEecCCc----eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence 45555543 888999999999999999999999999998876432 111 113467899999999999999999999
Q ss_pred CCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 129 PGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 129 ~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
+||+|++.+ ...|+|++|++++.+.++++|+++++.+++.+ .++.+||+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~- 155 (343)
T cd05285 78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC- 155 (343)
T ss_pred CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 999998621 02489999999999999999999999998877 5788999987
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc----HHHHHHHh
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLL 256 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~i~~~~ 256 (288)
..+++++|++|+|+|+ |++|++++++|+.+|++ ++++. .++++.++++++|++++++++... .+.+.+++
T Consensus 156 ~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 230 (343)
T cd05285 156 RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTD----IDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELL 230 (343)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHh
Confidence 6799999999999876 89999999999999998 77776 578888889999999999887643 56677777
Q ss_pred cCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 257 ANLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
++.+ +|++|||.|+. ..+.++++++++|+++
T Consensus 231 ~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v 262 (343)
T cd05285 231 GGKG-PDVVIECTGAESCIQTAIYATRPGGTVV 262 (343)
T ss_pred CCCC-CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 7765 99999999986 5589999999999985
No 96
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=6.7e-30 Score=226.56 Aligned_cols=233 Identities=27% Similarity=0.335 Sum_probs=202.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.++++ .+.+.+++.|.|++.+++|+||+.++++|+.|+..+.+..... ..|.++|||++|+|+.+|+++.++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~ 78 (325)
T cd08271 1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGW 78 (325)
T ss_pred CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcC
Confidence 68999999884 2348999999999999999999999999999998887654321 236789999999999999999999
Q ss_pred CCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007 128 APGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205 (288)
Q Consensus 128 ~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a 205 (288)
++||+|+++.. ..|+|++|+.++.+.++++|+++++.+++.+.+++.++++++.+.+++++|++++|+|++|++|+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~ 158 (325)
T cd08271 79 KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFA 158 (325)
T ss_pred CCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHH
Confidence 99999998752 1479999999999999999999999999999999999999998889999999999999989999999
Q ss_pred HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR 284 (288)
Q Consensus 206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~ 284 (288)
+++++..|++++.++ ++++.+.++++|.+.+++.+.. ..+.+..++++.+ +|+++||.++.....++++++++
T Consensus 159 ~~~a~~~g~~v~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~ 232 (325)
T cd08271 159 VQLAKRAGLRVITTC-----SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRG-VDAVLDTVGGETAAALAPTLAFN 232 (325)
T ss_pred HHHHHHcCCEEEEEE-----cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCC-CcEEEECCCcHhHHHHHHhhccC
Confidence 999999999988876 3466678888999988887654 3456777777665 99999999998777789999999
Q ss_pred CeeC
Q 023007 285 EEQW 288 (288)
Q Consensus 285 G~~v 288 (288)
|+++
T Consensus 233 G~~v 236 (325)
T cd08271 233 GHLV 236 (325)
T ss_pred CEEE
Confidence 9874
No 97
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.98 E-value=5.9e-30 Score=228.18 Aligned_cols=235 Identities=31% Similarity=0.383 Sum_probs=201.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++...+.+. .+++++.+.|.+.+++|+|++.++++|+.|...+.|........|..+|||++|+|+.+|+++.+|
T Consensus 1 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 1 MKAVVIRGHGGPE-VLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred CeEEEEecCCCcc-ceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCC
Confidence 6888888555432 378888888888999999999999999999998887654333557889999999999999999999
Q ss_pred CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
++||+|++.+. ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++.
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~ 159 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLV 159 (342)
T ss_pred CCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHH
Confidence 99999998732 2478999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLP 260 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g 260 (288)
+..++.++++++|+|+++.+|++++++++..|++++.+. .++++.+.++.++.+.+++.... ..+.+...+.+.+
T Consensus 160 ~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd08266 160 TRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATA----GSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRG 235 (342)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCC
Confidence 889999999999999988999999999999999998887 57778888888888888876553 3355666665544
Q ss_pred CccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 261 EPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 261 ~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+|+++||.|+...+.++++++++|+++
T Consensus 236 -~d~~i~~~g~~~~~~~~~~l~~~G~~v 262 (342)
T cd08266 236 -VDVVVEHVGAATWEKSLKSLARGGRLV 262 (342)
T ss_pred -CcEEEECCcHHHHHHHHHHhhcCCEEE
Confidence 999999999987899999999999875
No 98
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=8.5e-30 Score=224.59 Aligned_cols=231 Identities=29% Similarity=0.363 Sum_probs=199.6
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|++.+..++.. ..+.+.+.+.+.+.+++++|++.++++|+.|.....+..+. .+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (320)
T cd05286 1 KAVRIHKTGGP-EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFK 77 (320)
T ss_pred CeEEEecCCCc-cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCC
Confidence 35566555543 23667777777789999999999999999999888776543 3467899999999999999999999
Q ss_pred CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007 129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (288)
Q Consensus 129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l 208 (288)
+||+|+++. ..|++++|+.++.+.++++|+++++.+++.++..+.++|+++....++++|++|+|+|++|++|++++++
T Consensus 78 ~G~~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~ 156 (320)
T cd05286 78 VGDRVAYAG-PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW 156 (320)
T ss_pred CCCEEEEec-CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 999999874 1479999999999999999999999999999999999999998889999999999999989999999999
Q ss_pred HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ 287 (288)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~ 287 (288)
++.+|+++++++ .++++.+.++++|++++++.+.. ..+.+..++.+.+ +|+++||+++...+.++++++++|++
T Consensus 157 a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g~~ 231 (320)
T cd05286 157 AKALGATVIGTV----SSEEKAELARAAGADHVINYRDEDFVERVREITGGRG-VDVVYDGVGKDTFEGSLDSLRPRGTL 231 (320)
T ss_pred HHHcCCEEEEEc----CCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCC-eeEEEECCCcHhHHHHHHhhccCcEE
Confidence 999999999988 57888888999999999887653 3456777777665 99999999987779999999999998
Q ss_pred C
Q 023007 288 W 288 (288)
Q Consensus 288 v 288 (288)
+
T Consensus 232 v 232 (320)
T cd05286 232 V 232 (320)
T ss_pred E
Confidence 5
No 99
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.98 E-value=3.5e-30 Score=228.60 Aligned_cols=214 Identities=23% Similarity=0.266 Sum_probs=180.8
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+++. +++++.+.|++.++||+||+.++++|+.|.....|.++ .|.++|||++|+|+++|++ +
T Consensus 1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~ 69 (319)
T cd08242 1 MKALVLDGGLD----LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---E 69 (319)
T ss_pred CeeEEEeCCCc----EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---C
Confidence 68899987653 89999999999999999999999999999998887654 3678999999999999987 6
Q ss_pred CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007 128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180 (288)
Q Consensus 128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l 180 (288)
++||+|...+ ...|+|++|+.++.++++++|++++..+++.+ .+..++|..+
T Consensus 70 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~ 148 (319)
T cd08242 70 LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL 148 (319)
T ss_pred CCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence 7999997421 12589999999999999999999999888764 3455666555
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g 260 (288)
+..++++|++|+|+|+ |.+|++++|+|+.+|+++++++ .++++.++++++|++.+++++.. +++.+
T Consensus 149 -~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~ 214 (319)
T cd08242 149 -EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVG----RHSEKLALARRLGVETVLPDEAE--------SEGGG 214 (319)
T ss_pred -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEeCcccc--------ccCCC
Confidence 5688999999999975 9999999999999999988887 57899999999999988876442 34444
Q ss_pred CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 261 EPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|++|||+|+.. ...++++++++|+++
T Consensus 215 -~d~vid~~g~~~~~~~~~~~l~~~g~~v 242 (319)
T cd08242 215 -FDVVVEATGSPSGLELALRLVRPRGTVV 242 (319)
T ss_pred -CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence 999999998854 488999999999884
No 100
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=2.5e-30 Score=217.44 Aligned_cols=213 Identities=24% Similarity=0.299 Sum_probs=180.6
Q ss_pred ceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceE----EEEEEecCCCCCCCCCCEEEecC
Q 023007 62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGV----GEVYSVGSAVTRLAPGDWVIPSP 137 (288)
Q Consensus 62 ~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~----G~V~~~G~~~~~~~~Gd~V~~~~ 137 (288)
.+++++.+.|+++.+|||+|+.|.+++|+.+..++.... .-.|.-+|.... |+|++ +..++|++||.|....
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~S--Y~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~~ 101 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPS--YAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGVS 101 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcc--cCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEecc
Confidence 388999999999999999999999999987665543321 233566665544 44544 6788999999999863
Q ss_pred CCCcccceEEEeeCCcEEEcCCCCC--hhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe
Q 023007 138 PSSGTWQSYVVKDQSVWHKVSKDSP--MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215 (288)
Q Consensus 138 ~~~G~~a~~~~~~~~~l~~ip~~~~--~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~ 215 (288)
+|++|..++.+.+.|+.++.- ......+..+..|||.+|.+++++++|++|+|.+|+|++|..+.|+||..|++
T Consensus 102 ----GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~r 177 (340)
T COG2130 102 ----GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCR 177 (340)
T ss_pred ----cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCe
Confidence 999999999999999975422 23356677789999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 216 SINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 216 vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
|+.++ .+++|.+++++ +|+|.++||+..++ +.+.+.+.. ++|++|||+|++.++..+..|+..+|+.
T Consensus 178 VVGia----Gg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~--GIDvyfeNVGg~v~DAv~~~ln~~aRi~ 246 (340)
T COG2130 178 VVGIA----GGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPK--GIDVYFENVGGEVLDAVLPLLNLFARIP 246 (340)
T ss_pred EEEec----CCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCC--CeEEEEEcCCchHHHHHHHhhcccccee
Confidence 99999 78999999987 99999999998754 667777775 5999999999999999999999999974
No 101
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=8.8e-30 Score=225.61 Aligned_cols=235 Identities=29% Similarity=0.386 Sum_probs=203.6
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
||++++.+.+.+. .+.+.+.+.|.+.+++++|++.++++|+.|.....+........|..+|||++|+|+.+|+++.+|
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 1 MRAVRFHQFGGPE-VLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred CeEEEEeccCCcc-eeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcC
Confidence 5788888766542 377888888888999999999999999999988777655444557889999999999999999999
Q ss_pred CCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007 128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (288)
Q Consensus 128 ~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~ 203 (288)
++||+|++++. ..|.+++|+.++.+.++++|+++++.+++.++.++.++|+++.....+.++++++|+|++|++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~ 159 (328)
T cd08268 80 AVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL 159 (328)
T ss_pred CCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence 99999998753 24899999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282 (288)
Q Consensus 204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~ 282 (288)
+++++++..|++++.++ .++++.+.++++|.+.+++.+... .+.+..++.+.+ +|+++||.|+.....++++++
T Consensus 160 ~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~ 234 (328)
T cd08268 160 AAIQIANAAGATVIATT----RTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKG-VDVVFDPVGGPQFAKLADALA 234 (328)
T ss_pred HHHHHHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCC-ceEEEECCchHhHHHHHHhhc
Confidence 99999999999999998 567888888889988888876543 355666666655 999999999977799999999
Q ss_pred CCCeeC
Q 023007 283 FREEQW 288 (288)
Q Consensus 283 ~~G~~v 288 (288)
++|+++
T Consensus 235 ~~g~~v 240 (328)
T cd08268 235 PGGTLV 240 (328)
T ss_pred cCCEEE
Confidence 999975
No 102
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=6.2e-30 Score=229.42 Aligned_cols=229 Identities=24% Similarity=0.323 Sum_probs=189.2
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||+++++++++ +++++.|.|.+ .++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|+++.+
T Consensus 1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~ 74 (345)
T cd08287 1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTS 74 (345)
T ss_pred CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCc
Confidence 68899987664 88999999985 8999999999999999999888776543 34789999999999999999999
Q ss_pred CCCCCEEEe-cCC-------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhc-----ccccch
Q 023007 127 LAPGDWVIP-SPP-------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAA-----TIIVNP 173 (288)
Q Consensus 127 ~~~Gd~V~~-~~~-------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa-----~l~~~~ 173 (288)
+++||+|++ +.. ..|+|++|+.++.+ .++++|+++++..+. .+...+
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~ 154 (345)
T cd08287 75 VKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVM 154 (345)
T ss_pred cCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHH
Confidence 999999987 211 13889999999975 999999999983222 222567
Q ss_pred HHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHH
Q 023007 174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNV 252 (288)
Q Consensus 174 ~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i 252 (288)
.+||+++. ..++++|++|+|.|+ |++|++++++|+.+|++++.+++ .++++.+.++++|++++++++.. ..+.+
T Consensus 155 ~~a~~~~~-~~~~~~g~~vlI~g~-g~vg~~~~~lak~~G~~~v~~~~---~~~~~~~~~~~~ga~~v~~~~~~~~~~~i 229 (345)
T cd08287 155 GTGHHAAV-SAGVRPGSTVVVVGD-GAVGLCAVLAAKRLGAERIIAMS---RHEDRQALAREFGATDIVAERGEEAVARV 229 (345)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHcCCceEecCCcccHHHHH
Confidence 88999885 588999999999875 99999999999999997444443 46778888899999999998764 34667
Q ss_pred HHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
.+++++.+ +|+++||+|+.. .+.++++++++|+++
T Consensus 230 ~~~~~~~~-~d~il~~~g~~~~~~~~~~~l~~~g~~v 265 (345)
T cd08287 230 RELTGGVG-ADAVLECVGTQESMEQAIAIARPGGRVG 265 (345)
T ss_pred HHhcCCCC-CCEEEECCCCHHHHHHHHHhhccCCEEE
Confidence 77777665 999999998754 499999999999984
No 103
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=8.7e-30 Score=231.88 Aligned_cols=219 Identities=21% Similarity=0.286 Sum_probs=184.4
Q ss_pred eEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC------CCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEec
Q 023007 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136 (288)
Q Consensus 63 ~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 136 (288)
+++++.|.|++.+++|+|++.++++|++|...+.+.. +...++|.++|||++|+|+++|+++++|++||+|++.
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 8999999999999999999999999999998876321 2223567899999999999999999999999999862
Q ss_pred C--------------------------CCCcccceEEEeeCCcEEEcCCCC-------ChhhhcccccchHHHHHHHHhh
Q 023007 137 P--------------------------PSSGTWQSYVVKDQSVWHKVSKDS-------PMEYAATIIVNPLTALRMLEDF 183 (288)
Q Consensus 137 ~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~-------~~~~aa~l~~~~~ta~~~l~~~ 183 (288)
+ ...|+|++|+.++.+.++++|+++ +.. ++.++.++++||+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 1 115899999999999999999863 444 556667889999998766
Q ss_pred -cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc----ccHHHHHHHhc
Q 023007 184 -TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQ----LEVKNVKGLLA 257 (288)
Q Consensus 184 -~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~~~i~~~~~ 257 (288)
.++++|++|+|+|+ |.+|++++++|+.+|+ +++++. .++++.+.++++|+++++++++ ...+.+.++++
T Consensus 198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~ 272 (384)
T cd08265 198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFE----ISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTK 272 (384)
T ss_pred cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcC
Confidence 68999999999965 9999999999999999 577776 4677888989999999998763 33467888888
Q ss_pred CCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVGGN--SASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v 288 (288)
+.+ +|+|+||.|+. ....++++|+++|+|+
T Consensus 273 g~g-vDvvld~~g~~~~~~~~~~~~l~~~G~~v 304 (384)
T cd08265 273 GWG-ADIQVEAAGAPPATIPQMEKSIAINGKIV 304 (384)
T ss_pred CCC-CCEEEECCCCcHHHHHHHHHHHHcCCEEE
Confidence 776 99999999974 4488999999999985
No 104
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.97 E-value=7e-30 Score=228.55 Aligned_cols=225 Identities=22% Similarity=0.242 Sum_probs=192.0
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|+++.+.+++ .+++++++.|++.++|++||+.++++|+.|++.+.|.... ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (337)
T cd05283 1 KGYAARDASG---KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFK 76 (337)
T ss_pred CceEEecCCC---CceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccC
Confidence 4577777774 3899999999999999999999999999999998886543 35688999999999999999999999
Q ss_pred CCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007 129 PGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174 (288)
Q Consensus 129 ~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ 174 (288)
+||+|+..+ ...|++++|+.++.+.++++|+++++.+++.+.+.+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ 156 (337)
T cd05283 77 VGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGI 156 (337)
T ss_pred CCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHH
Confidence 999997310 2258999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (288)
Q Consensus 175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~ 254 (288)
+||+++.+ ..+++|++++|.|+ |.+|++++++++.+|++++.+. .++++.++++++|++.+++.+.... ...
T Consensus 157 ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~--~~~ 228 (337)
T cd05283 157 TVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFS----RSPSKKEDALKLGADEFIATKDPEA--MKK 228 (337)
T ss_pred HHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEecCcchhh--hhh
Confidence 99999876 45899999999875 9999999999999999998887 5778888889999999988765321 122
Q ss_pred HhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 255 LLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
. +. ++|++|||+|... ...++++++++|+++
T Consensus 229 ~--~~-~~d~v~~~~g~~~~~~~~~~~l~~~G~~v 260 (337)
T cd05283 229 A--AG-SLDLIIDTVSASHDLDPYLSLLKPGGTLV 260 (337)
T ss_pred c--cC-CceEEEECCCCcchHHHHHHHhcCCCEEE
Confidence 1 22 4999999999886 589999999999874
No 105
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.97 E-value=8.6e-30 Score=226.96 Aligned_cols=224 Identities=27% Similarity=0.356 Sum_probs=191.9
Q ss_pred ceEEEEccCCCCC-cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~-~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
||++++.+++.+. +.+++++.+.|.+.++||+||+.++++|+.|...+.|..+. ...|.++|||++|+|+++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 6889998877431 23778888888899999999999999999999988886554 245789999999999999999999
Q ss_pred CCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007 127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (288)
Q Consensus 127 ~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~ 179 (288)
|++||+|++.+. ..|+|++|+.++.+.++++|+++++.+++.++.++.+||++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 999999986310 14899999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL 259 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~ 259 (288)
+ ..++++++++++|+|+ |++|++++++++..|++++.++ .++++.+.++++|++.+++.+.. .+.
T Consensus 160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~---------~~~ 224 (329)
T cd08298 160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFT----RSGEHQELARELGADWAGDSDDL---------PPE 224 (329)
T ss_pred H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEc----CChHHHHHHHHhCCcEEeccCcc---------CCC
Confidence 9 7799999999999985 9999999999999999999888 56788888899999888876542 123
Q ss_pred CCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+ +|++++|.+... .+.++++++++|+|+
T Consensus 225 ~-vD~vi~~~~~~~~~~~~~~~l~~~G~~v 253 (329)
T cd08298 225 P-LDAAIIFAPVGALVPAALRAVKKGGRVV 253 (329)
T ss_pred c-ccEEEEcCCcHHHHHHHHHHhhcCCEEE
Confidence 3 999999876544 499999999999985
No 106
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=1.9e-29 Score=227.05 Aligned_cols=233 Identities=26% Similarity=0.318 Sum_probs=187.6
Q ss_pred eEEEEccCCCCCcceEEEEcCCCC-CCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC-C
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT-R 126 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~-~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~-~ 126 (288)
|++++.+++++.. ++..+.|.|+ +.+++|+|++.++++|++|...+.+........|.++|+|++|+|+++|++++ +
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 2 KALTFKNNTSPLT-ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred ceEEEecCCCcce-eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 6788888887632 4445555554 48999999999999999998877542221112367899999999999999998 8
Q ss_pred CCCCCEEEecCC----CCcccceEEEeeCC----cEEEcCCCCChhhhcccccchHHHHHHHHhhc-CCCCCCeEEEeCC
Q 023007 127 LAPGDWVIPSPP----SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGA 197 (288)
Q Consensus 127 ~~~Gd~V~~~~~----~~G~~a~~~~~~~~----~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~g~ 197 (288)
|++||+|+++.. ..|+|++|++++.. .++++|+++++.+++.++.++.|||+++.... ++++|++|+|+|+
T Consensus 81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga 160 (352)
T cd08247 81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG 160 (352)
T ss_pred CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence 999999998752 15899999999987 78999999999999999999999999998877 8999999999999
Q ss_pred CChHHHHHHHHHHHc-CC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc----HHHHHHHhc-CCCCccEEEECCC
Q 023007 198 TSIVGQCIIQIARHR-GI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLA-NLPEPALGFNCVG 270 (288)
Q Consensus 198 ~g~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~i~~~~~-~~g~~D~v~d~~g 270 (288)
++++|++++++|+.+ +. .++.+. ++++.+.++++|+++++++++.. ...+.+.+. +.+ +|++|||+|
T Consensus 161 ~~~vg~~~~~~a~~~~~~~~v~~~~-----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g 234 (352)
T cd08247 161 STSVGRFAIQLAKNHYNIGTVVGTC-----SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGK-FDLILDCVG 234 (352)
T ss_pred CchHHHHHHHHHHhcCCcceEEEEe-----ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCC-ceEEEECCC
Confidence 999999999999987 45 455554 34445577899999999876533 345445443 444 999999999
Q ss_pred cc-cHHHHHhhcc---CCCeeC
Q 023007 271 GN-SASKVLKFLR---FREEQW 288 (288)
Q Consensus 271 ~~-~~~~a~~~l~---~~G~~v 288 (288)
+. ....++++++ ++|+||
T Consensus 235 ~~~~~~~~~~~l~~~~~~G~~v 256 (352)
T cd08247 235 GYDLFPHINSILKPKSKNGHYV 256 (352)
T ss_pred CHHHHHHHHHHhCccCCCCEEE
Confidence 84 4588899999 999875
No 107
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=2.5e-29 Score=222.46 Aligned_cols=234 Identities=26% Similarity=0.341 Sum_probs=201.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL 127 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 127 (288)
|+++.+..++.+. .+.+++.+.+.+.+++++|++.++++|+.|.....+.+.....+|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 1 MKAIEITEPGGPE-VLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred CceEEEccCCCcc-cceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCC
Confidence 5788887766543 366777777778999999999999999999988877554433457899999999999999999999
Q ss_pred CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007 128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207 (288)
Q Consensus 128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~ 207 (288)
++||+|+++.. .|++++|+.++...++++|+++++.+++.++.++.++|+++.....+++|++++|+|++|++|+++++
T Consensus 80 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~ 158 (325)
T TIGR02824 80 KVGDRVCALVA-GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ 158 (325)
T ss_pred CCCCEEEEccC-CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHH
Confidence 99999998753 37999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE 286 (288)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~ 286 (288)
+++.+|++++.+. .++++.+.++++|.+.+++.... ..+.+..+.++.+ +|+++||+|+.....++++++++|+
T Consensus 159 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~g~ 233 (325)
T TIGR02824 159 LAKAFGARVFTTA----GSDEKCAACEALGADIAINYREEDFVEVVKAETGGKG-VDVILDIVGGSYLNRNIKALALDGR 233 (325)
T ss_pred HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCC-eEEEEECCchHHHHHHHHhhccCcE
Confidence 9999999999888 56778888888998888876543 3456666666555 9999999998777889999999999
Q ss_pred eC
Q 023007 287 QW 288 (288)
Q Consensus 287 ~v 288 (288)
++
T Consensus 234 ~v 235 (325)
T TIGR02824 234 IV 235 (325)
T ss_pred EE
Confidence 85
No 108
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=1.9e-29 Score=226.11 Aligned_cols=229 Identities=29% Similarity=0.314 Sum_probs=188.8
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC--CCCCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
||++.++..+. .+.+.+.+.|.+.++|++||+.++++|+.|...+.+.. ......|..+|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~ 77 (341)
T cd05281 1 MKAIVKTKAGP---GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT 77 (341)
T ss_pred CcceEEecCCC---ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence 68888887764 38899999999999999999999999999988765421 11123467899999999999999999
Q ss_pred CCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007 126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 179 (288)
Q Consensus 126 ~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~ 179 (288)
++++||+|+++.. ..|+|++|++++.+.++++|++++.+. ++++.++.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~ 156 (341)
T cd05281 78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHT 156 (341)
T ss_pred CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHH
Confidence 9999999998521 248999999999999999999999854 4666678888887
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcC
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~ 258 (288)
+. ...++|++|+|.|+ |++|++++++++.+|+ +++++. .++++.+.++++|.+++++++......+.+++++
T Consensus 157 ~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T cd05281 157 VL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASD----PNPYRLELAKKMGADVVINPREEDVVEVKSVTDG 229 (341)
T ss_pred HH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCcceeeCcccccHHHHHHHcCC
Confidence 65 45678999999876 9999999999999999 577774 5788888889999999988765432267777776
Q ss_pred CCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 259 LPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 259 ~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
.+ +|++|||+|+... ..++++|+++|+|+
T Consensus 230 ~~-vd~vld~~g~~~~~~~~~~~l~~~G~~v 259 (341)
T cd05281 230 TG-VDVVLEMSGNPKAIEQGLKALTPGGRVS 259 (341)
T ss_pred CC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence 65 9999999987654 88999999999975
No 109
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.97 E-value=1.5e-29 Score=226.36 Aligned_cols=223 Identities=25% Similarity=0.329 Sum_probs=182.0
Q ss_pred EEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHh-CCCCC-CCCCCcccccceEEEEEEecCCCCCCCC
Q 023007 52 VYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAP 129 (288)
Q Consensus 52 ~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 129 (288)
++++.+. +.+++.+.|.+.++||+||+.++++|+.|...+. +.... ....|.++|+|++|+|+++|+++++|++
T Consensus 2 ~~~~~~~----~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 77 (339)
T cd08232 2 VIHAAGD----LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAP 77 (339)
T ss_pred eeccCCc----eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCC
Confidence 3455544 8999999999999999999999999999988764 32211 1134678999999999999999999999
Q ss_pred CCEEEecC-------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH
Q 023007 130 GDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 178 (288)
Q Consensus 130 Gd~V~~~~-------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~ 178 (288)
||+|++.+ ...|+|++|+.++.+.++++|+++++.+++. ..++.++|+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~ 156 (339)
T cd08232 78 GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALH 156 (339)
T ss_pred CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHH
Confidence 99998731 1248999999999999999999999999876 568889999
Q ss_pred HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhc
Q 023007 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257 (288)
Q Consensus 179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~ 257 (288)
++.+.... +|++|||.|+ |.+|++++++|+.+|+ +++++. .++++.+.++++|.+++++++... +..+..
T Consensus 157 ~l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~----~s~~~~~~~~~~g~~~vi~~~~~~---~~~~~~ 227 (339)
T cd08232 157 AVNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATD----LADAPLAVARAMGADETVNLARDP---LAAYAA 227 (339)
T ss_pred HHHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCCEEEcCCchh---hhhhhc
Confidence 99876666 9999999875 9999999999999999 677776 467888888999999999887643 223332
Q ss_pred CCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVGGN-SASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v 288 (288)
+.+++|++|||.|+. ..+.++++|+++|+|+
T Consensus 228 ~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v 259 (339)
T cd08232 228 DKGDFDVVFEASGAPAALASALRVVRPGGTVV 259 (339)
T ss_pred cCCCccEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 222499999999964 4589999999999985
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=3e-29 Score=223.29 Aligned_cols=229 Identities=24% Similarity=0.279 Sum_probs=190.3
Q ss_pred ceEEEEccCCC---CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCC--CCCCcccccceEEEEEEecC
Q 023007 48 SKAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGS 122 (288)
Q Consensus 48 ~~a~~~~~~g~---~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~ 122 (288)
+++|.+.+.++ +.+.+++++.+.|++.+++|+||+.++++|+.|.....+..... ...+..+|+|++|+|+++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777776553 33568999999999999999999999999998876555432111 11245789999999999996
Q ss_pred CCCCCCCCCEEEecCCCCcccceEEEeeC-CcEEEcCCCCC--hhhhcc-cccchHHHHHHHHhhcCCCCCCeEEEeCCC
Q 023007 123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVSKDSP--MEYAAT-IIVNPLTALRMLEDFTTLNSGDSIVQNGAT 198 (288)
Q Consensus 123 ~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~-~~l~~ip~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 198 (288)
+ +|++||+|+++ ++|++|+.++. +.++++|++++ +.+++. ++.++.+||+++.....+.+|++|+|+|++
T Consensus 82 ~--~~~~Gd~V~~~----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 155 (329)
T cd05288 82 P--DFKVGDLVSGF----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAA 155 (329)
T ss_pred C--CCCCCCEEecc----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCc
Confidence 4 79999999975 48999999999 99999999995 555555 888999999999888889999999999998
Q ss_pred ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHH
Q 023007 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASK 276 (288)
Q Consensus 199 g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~ 276 (288)
|.+|++++++++.+|++++.++ .++++.+.+++ +|+++++++++. ..+.+.++++ . ++|++|||+|+...+.
T Consensus 156 g~ig~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~-~~d~vi~~~g~~~~~~ 229 (329)
T cd05288 156 GAVGSVVGQIAKLLGARVVGIA----GSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-D-GIDVYFDNVGGEILDA 229 (329)
T ss_pred chHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-C-CceEEEEcchHHHHHH
Confidence 9999999999999999999988 57888888887 999999988764 3456666664 3 4999999999977799
Q ss_pred HHhhccCCCeeC
Q 023007 277 VLKFLRFREEQW 288 (288)
Q Consensus 277 a~~~l~~~G~~v 288 (288)
++++++++|+|+
T Consensus 230 ~~~~l~~~G~~v 241 (329)
T cd05288 230 ALTLLNKGGRIA 241 (329)
T ss_pred HHHhcCCCceEE
Confidence 999999999985
No 111
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=2.4e-29 Score=220.52 Aligned_cols=213 Identities=26% Similarity=0.297 Sum_probs=189.3
Q ss_pred CCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCC-CCcccceEEE
Q 023007 70 PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-SSGTWQSYVV 148 (288)
Q Consensus 70 ~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~-~~G~~a~~~~ 148 (288)
.|++.+++++|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|+++.+|++||+|+++.. ..|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 466889999999999999999999988766544456889999999999999999999999999998752 3589999999
Q ss_pred eeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHH
Q 023007 149 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228 (288)
Q Consensus 149 ~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~ 228 (288)
++.+.++++|+++++.+++.++.++.+||+++. ...+++|++++|+++++.+|++++++++.+|++++.++ .+++
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~----~~~~ 156 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATA----SSDD 156 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEc----CCHH
Confidence 999999999999999999999999999999985 68999999999999999999999999999999999998 5778
Q ss_pred HHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 229 AKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 229 ~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+.+.++++|.+.+++.... ..+.+..++++.+ +|+++||+++.....++++++++|+|+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v 216 (303)
T cd08251 157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRG-VDVVINTLSGEAIQKGLNCLAPGGRYV 216 (303)
T ss_pred HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHHhccCcEEE
Confidence 8888899999999987664 3456777777766 999999998877789999999999975
No 112
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=2.8e-29 Score=224.84 Aligned_cols=223 Identities=26% Similarity=0.255 Sum_probs=183.6
Q ss_pred ccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCCCCCCCC
Q 023007 54 EREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGD 131 (288)
Q Consensus 54 ~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd 131 (288)
++++.+ +++++.|.|.+.++||+||+.++++|+.|..++.+... ....+|.++|+|++|+|+++|+++++|++||
T Consensus 5 ~~~~~~---~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 81 (340)
T TIGR00692 5 TKPGYG---AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81 (340)
T ss_pred ccCCCC---cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCC
Confidence 445554 78899999999999999999999999999987655311 1123466899999999999999999999999
Q ss_pred EEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcC
Q 023007 132 WVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT 185 (288)
Q Consensus 132 ~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~ 185 (288)
+|++.. ...|+|++|++++.+.++++|+++++.++ +++.++.+||+++ ...
T Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~ 158 (340)
T TIGR00692 82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAG 158 (340)
T ss_pred EEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--Hcc
Confidence 999732 12589999999999999999999998654 5677888999886 355
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCcc
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPA 263 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D 263 (288)
.++|++|+|.|+ |++|.+++++++.+|++ ++++. .++++.+.++++|++.+++++.. ..+.+.+++++.+ +|
T Consensus 159 ~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~-~d 232 (340)
T TIGR00692 159 PISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSD----PNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG-VD 232 (340)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCC-CC
Confidence 789999999775 99999999999999997 66664 57888888999999988887654 3466777777665 99
Q ss_pred EEEECCCccc-HHHHHhhccCCCeeC
Q 023007 264 LGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 264 ~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+++||+|+.. ....+++|+++|+|+
T Consensus 233 ~vld~~g~~~~~~~~~~~l~~~g~~v 258 (340)
T TIGR00692 233 VFLEMSGAPKALEQGLQAVTPGGRVS 258 (340)
T ss_pred EEEECCCCHHHHHHHHHhhcCCCEEE
Confidence 9999988754 488899999999985
No 113
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.7e-29 Score=221.83 Aligned_cols=215 Identities=22% Similarity=0.221 Sum_probs=182.0
Q ss_pred eEEEEcCCCCCCCCeEEEEEeEEecChHHHHHH-hCCCCCC-CCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCC
Q 023007 63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS 140 (288)
Q Consensus 63 ~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 140 (288)
+++++++.|++.++||+|++.++++|+.|...+ .+..... +..|..+|+|++|+|+.+|+++.++++||+|+++. .
T Consensus 7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~ 84 (312)
T cd08269 7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--G 84 (312)
T ss_pred eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--C
Confidence 889999999999999999999999999999887 6543221 12467899999999999999999999999999875 4
Q ss_pred cccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEE
Q 023007 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINI 219 (288)
Q Consensus 141 G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~ 219 (288)
|+|++|+.++.+.++++|+++ ..++....++.++|+++. ..++++|++|+|+|+ |.+|.+++++|+.+|++ ++++
T Consensus 85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~ 160 (312)
T cd08269 85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI 160 (312)
T ss_pred CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence 799999999999999999998 222222267788999887 689999999999975 99999999999999999 8887
Q ss_pred EcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 220 IRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
. .++++.+.++++|++++++++.. ..+.+.+++++.+ +|+++||.|+.. ...++++|+++|+|+
T Consensus 161 ~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~~~~~l~~~g~~~ 226 (312)
T cd08269 161 D----RRPARLALARELGATEVVTDDSEAIVERVRELTGGAG-ADVVIEAVGHQWPLDLAGELVAERGRLV 226 (312)
T ss_pred C----CCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence 7 56788888899999998887643 4567777777766 999999998765 488999999999984
No 114
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.97 E-value=1e-28 Score=223.36 Aligned_cols=230 Identities=25% Similarity=0.264 Sum_probs=181.3
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
|++.++..+.. +++++.+.|.+.++||+||+.++++|++|...+.+.... ....|.++|||++|+|+++|++++
T Consensus 18 ~~~~~~~~~~~----l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 18 NMAAWLVGVNT----LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred cceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 34444444433 788888888899999999999999999999988763211 112467899999999999999999
Q ss_pred CCCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH
Q 023007 126 RLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 178 (288)
Q Consensus 126 ~~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~ 178 (288)
+|++||+|++.+ ...|+|++|+.++.+.++++|+++++.+++.. .++.++|+
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~ 172 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVH 172 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHH
Confidence 999999998731 01489999999999999999999999988752 24556888
Q ss_pred HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC--c-ccHHHHHHH
Q 023007 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES--Q-LEVKNVKGL 255 (288)
Q Consensus 179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~--~-~~~~~i~~~ 255 (288)
++ ...++.+|++|+|+|+ |++|++++++++.+|++++++++ .++++.+.++++|++.++++. . ...+.+..+
T Consensus 173 ~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 247 (364)
T PLN02702 173 AC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVD---VDDERLSVAKQLGADEIVLVSTNIEDVESEVEEI 247 (364)
T ss_pred HH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEEecCcccccHHHHHHHH
Confidence 87 5688999999999975 99999999999999998655554 468888888999999887643 2 223444443
Q ss_pred h--cCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007 256 L--ANLPEPALGFNCVGG-NSASKVLKFLRFREEQW 288 (288)
Q Consensus 256 ~--~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v 288 (288)
+ .+. ++|++|||+|+ .....++++++++|+|+
T Consensus 248 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v 282 (364)
T PLN02702 248 QKAMGG-GIDVSFDCVGFNKTMSTALEATRAGGKVC 282 (364)
T ss_pred hhhcCC-CCCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 2 233 49999999996 44599999999999985
No 115
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=5e-29 Score=218.95 Aligned_cols=231 Identities=28% Similarity=0.393 Sum_probs=196.1
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVT 125 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~ 125 (288)
|+++++..++... .+.+++.+.|.+.+++|+|++.++++|+.|+..+.+... .....|..+|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~ 79 (309)
T cd05289 1 MKAVRIHEYGGPE-VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT 79 (309)
T ss_pred CceEEEcccCCcc-ceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence 6788888776543 266777777788999999999999999999998877542 1224478899999999999999999
Q ss_pred CCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007 126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203 (288)
Q Consensus 126 ~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~ 203 (288)
++++||+|+++.. ..|++++|+.++...++++|+++++..++.++..+.++|+++.....+.+|++|+|+|++|.+|+
T Consensus 80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~ 159 (309)
T cd05289 80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGS 159 (309)
T ss_pred CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Confidence 9999999998851 14799999999999999999999999999999999999999988788999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF 283 (288)
Q Consensus 204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~ 283 (288)
+++++++..|++++.++ .++ +.+.++++|.+++++.+...... .+.+.+ +|+++||+|+.....+++++++
T Consensus 160 ~~~~~a~~~g~~v~~~~----~~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~-~d~v~~~~~~~~~~~~~~~l~~ 230 (309)
T cd05289 160 FAVQLAKARGARVIATA----SAA-NADFLRSLGADEVIDYTKGDFER---AAAPGG-VDAVLDTVGGETLARSLALVKP 230 (309)
T ss_pred HHHHHHHHcCCEEEEEe----cch-hHHHHHHcCCCEEEeCCCCchhh---ccCCCC-ceEEEECCchHHHHHHHHHHhc
Confidence 99999999999999887 344 67778889998888876543322 334444 9999999999977999999999
Q ss_pred CCeeC
Q 023007 284 REEQW 288 (288)
Q Consensus 284 ~G~~v 288 (288)
+|+++
T Consensus 231 ~g~~v 235 (309)
T cd05289 231 GGRLV 235 (309)
T ss_pred CcEEE
Confidence 99985
No 116
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.97 E-value=1.1e-28 Score=219.83 Aligned_cols=225 Identities=27% Similarity=0.313 Sum_probs=191.2
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|++++.++|.. +++++.|.|.+.+++++|++.++++|+.|...+.+.... ..+|.++|||++|+|+.+|+++++|+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~ 76 (330)
T cd08245 1 KAAVVHAAGGP---LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRK 76 (330)
T ss_pred CeEEEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCcccc
Confidence 57888877542 889999999999999999999999999999988876543 24578899999999999999999999
Q ss_pred CCCEEEecC--------------------------C-CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007 129 PGDWVIPSP--------------------------P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181 (288)
Q Consensus 129 ~Gd~V~~~~--------------------------~-~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~ 181 (288)
+||+|+..+ . ..|++++|+.++.++++++|+++++.+++.++..+.+||+++.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 77 VGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred cCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999998421 0 2589999999999999999999999999999999999999987
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
. .+++++++|+|+|+ |.+|++++++|+.+|++++.++ .++++.++++++|++.+++.+.... ... ..+ +
T Consensus 157 ~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~--~ 225 (330)
T cd08245 157 D-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAIT----RSPDKRELARKLGADEVVDSGAELD--EQA-AAG--G 225 (330)
T ss_pred h-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhCCcEEeccCCcch--HHh-ccC--C
Confidence 6 78999999999976 7799999999999999999988 5788889999999998887665432 111 222 4
Q ss_pred ccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 262 PALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 262 ~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|+++||+++.. ...++++++++|+++
T Consensus 226 ~d~vi~~~~~~~~~~~~~~~l~~~G~~i 253 (330)
T cd08245 226 ADVILVTVVSGAAAEAALGGLRRGGRIV 253 (330)
T ss_pred CCEEEECCCcHHHHHHHHHhcccCCEEE
Confidence 999999988644 489999999999874
No 117
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=9.1e-29 Score=213.50 Aligned_cols=205 Identities=30% Similarity=0.388 Sum_probs=178.7
Q ss_pred eEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCC------------------
Q 023007 77 DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------ 138 (288)
Q Consensus 77 evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~------------------ 138 (288)
||+|++.++++|+.|...+.+..+.....|.++|+|++|+|+++|+++++|++||+|+++..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 68999999999999999988876533355789999999999999999999999999999763
Q ss_pred ----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC
Q 023007 139 ----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214 (288)
Q Consensus 139 ----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~ 214 (288)
..|++++|+.++.+.++++|+++++.+++.++.++.+||+++.....+.+|++|+|+|+++ +|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 1589999999999999999999999999999999999999998888789999999999966 99999999999999
Q ss_pred eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007 215 HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLRFREEQW 288 (288)
Q Consensus 215 ~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v 288 (288)
++++++ .++++.+.++++|.++++++.... .+.+. .+.+.+ +|++|||+++ ...+.++++++++|+++
T Consensus 160 ~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v 229 (271)
T cd05188 160 RVIVTD----RSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGG-ADVVIDAVGGPETLAQALRLLRPGGRIV 229 (271)
T ss_pred eEEEEc----CCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCC-CCEEEECCCCHHHHHHHHHhcccCCEEE
Confidence 999998 577888889999998888876543 33444 444444 9999999998 56699999999999985
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=3.5e-28 Score=214.72 Aligned_cols=233 Identities=29% Similarity=0.358 Sum_probs=199.4
Q ss_pred ceEEEEccCCCCCcceEEEEcCCCCCC-CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007 48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126 (288)
Q Consensus 48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 126 (288)
|+++++..++... .+++.+.+ |.+. +++++|++.++++|+.|...+.+........|..+|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 1 MKAVVCKELGGPE-DLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred CeEEEEecCCCcc-eeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 5788887655543 37777777 6665 4999999999999999998887765433344668999999999999999999
Q ss_pred CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (288)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~ 206 (288)
+++||+|+++.. .|++++|+.++.+.++++|+++++.+++.+..++.+||+++.....+++|++|+|+|++|++|++++
T Consensus 79 ~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~ 157 (323)
T cd08241 79 FKVGDRVVALTG-QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV 157 (323)
T ss_pred CCCCCEEEEecC-CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence 999999999862 4799999999999999999999999999899899999999987889999999999999999999999
Q ss_pred HHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCC
Q 023007 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFRE 285 (288)
Q Consensus 207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G 285 (288)
++++..|++++.++ .++++.+.++++|.+.+++.+.. ..+.+...+++.+ +|+++||.|+...+.++++++++|
T Consensus 158 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~g~~~~~~~~~~~~~~g 232 (323)
T cd08241 158 QLAKALGARVIAAA----SSEEKLALARALGADHVIDYRDPDLRERVKALTGGRG-VDVVYDPVGGDVFEASLRSLAWGG 232 (323)
T ss_pred HHHHHhCCEEEEEe----CCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCC-cEEEEECccHHHHHHHHHhhccCC
Confidence 99999999999988 57788888888998888887654 3456777777655 999999999877789999999999
Q ss_pred eeC
Q 023007 286 EQW 288 (288)
Q Consensus 286 ~~v 288 (288)
+++
T Consensus 233 ~~v 235 (323)
T cd08241 233 RLL 235 (323)
T ss_pred EEE
Confidence 874
No 119
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=5.4e-28 Score=215.36 Aligned_cols=232 Identities=25% Similarity=0.313 Sum_probs=193.6
Q ss_pred eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007 49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA 128 (288)
Q Consensus 49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 128 (288)
|++.+...+... .+.+++.+.|.+.+++++|++.++++|+.|...+.+.....+..|..+|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 79 (337)
T cd08275 1 RAVVLTGFGGLD-KLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFK 79 (337)
T ss_pred CeEEEcCCCCcc-ceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCC
Confidence 356666555432 3778888877889999999999999999999988876544334577899999999999999999999
Q ss_pred CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007 129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (288)
Q Consensus 129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l 208 (288)
+||+|+++.. .|++++|+.++.+.++++|+++++.+++.++.++.++|+++....++++|++|+|+|++|++|++++++
T Consensus 80 ~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~ 158 (337)
T cd08275 80 VGDRVMGLTR-FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL 158 (337)
T ss_pred CCCEEEEecC-CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence 9999999864 479999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ 287 (288)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~ 287 (288)
++.+ .++.+++. ..+++.+.++.+|.+.+++.+... .+.+...++ . ++|+++||+|+.....++++++++|++
T Consensus 159 a~~~--~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~d~v~~~~g~~~~~~~~~~l~~~g~~ 232 (337)
T cd08275 159 CKTV--PNVTVVGT--ASASKHEALKENGVTHVIDYRTQDYVEEVKKISP-E-GVDIVLDALGGEDTRKSYDLLKPMGRL 232 (337)
T ss_pred HHHc--cCcEEEEe--CCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-C-CceEEEECCcHHHHHHHHHhhccCcEE
Confidence 9998 22333322 245677888889999888877543 456666664 3 499999999998778999999999997
Q ss_pred C
Q 023007 288 W 288 (288)
Q Consensus 288 v 288 (288)
+
T Consensus 233 v 233 (337)
T cd08275 233 V 233 (337)
T ss_pred E
Confidence 5
No 120
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.7e-28 Score=215.73 Aligned_cols=227 Identities=30% Similarity=0.383 Sum_probs=187.1
Q ss_pred ccCCCCCcc-eEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCCCCCCC
Q 023007 54 EREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPG 130 (288)
Q Consensus 54 ~~~g~~~~~-~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~G 130 (288)
+..+++.+. +++++.+.|.+.+++|+|++.++++|+.|...+.|..+. ....|..+|||++|+|.++|+++.++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G 83 (319)
T cd08267 4 TRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVG 83 (319)
T ss_pred CCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCC
Confidence 344444433 277888888899999999999999999999988775421 11236789999999999999999999999
Q ss_pred CEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007 131 DWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208 (288)
Q Consensus 131 d~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l 208 (288)
|+|+++.. ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++....++++|++|+|+|++|++|++++++
T Consensus 84 d~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~l 163 (319)
T cd08267 84 DEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQI 163 (319)
T ss_pred CEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 99998753 2489999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH--HHHHhhccCCCe
Q 023007 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA--SKVLKFLRFREE 286 (288)
Q Consensus 209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~ 286 (288)
++.+|++++.++ .+ ++.+.++++|.+++++.+..... ...+.+.+ +|+++||+|+... ...+..++++|+
T Consensus 164 a~~~g~~v~~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~-~d~vi~~~~~~~~~~~~~~~~l~~~g~ 235 (319)
T cd08267 164 AKALGAHVTGVC----ST-RNAELVRSLGADEVIDYTTEDFV--ALTAGGEK-YDVIFDAVGNSPFSLYRASLALKPGGR 235 (319)
T ss_pred HHHcCCEEEEEe----CH-HHHHHHHHcCCCEeecCCCCCcc--hhccCCCC-CcEEEECCCchHHHHHHhhhccCCCCE
Confidence 999999999887 33 77788899999888887654322 34455544 9999999996432 444445999998
Q ss_pred eC
Q 023007 287 QW 288 (288)
Q Consensus 287 ~v 288 (288)
++
T Consensus 236 ~i 237 (319)
T cd08267 236 YV 237 (319)
T ss_pred EE
Confidence 74
No 121
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.96 E-value=3.2e-28 Score=212.47 Aligned_cols=173 Identities=23% Similarity=0.199 Sum_probs=149.4
Q ss_pred ccccceEEEEEEecCCCC------CCCCCCEEEecCC---------------------------------CCcccceEEE
Q 023007 108 VGGYEGVGEVYSVGSAVT------RLAPGDWVIPSPP---------------------------------SSGTWQSYVV 148 (288)
Q Consensus 108 ~~G~e~~G~V~~~G~~~~------~~~~Gd~V~~~~~---------------------------------~~G~~a~~~~ 148 (288)
++|||++|+|+++|++++ +|++||||+..+. .+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999998 8999999976431 1389999999
Q ss_pred eeCC-cEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCC
Q 023007 149 KDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGS 226 (288)
Q Consensus 149 ~~~~-~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~ 226 (288)
+|+. .++++|+++++++++.+++.+.|+|+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ ++++. .+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~----~~ 154 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAAD----PS 154 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CC
Confidence 9997 799999999999999999889999999876 45669999999988 99999999999999997 66664 57
Q ss_pred HHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 227 DEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 227 ~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+++.+.++++|++.++++... .+.+.+++++.+ +|++|||+|.+.. +.++++++++|+++
T Consensus 155 ~~r~~~a~~~Ga~~~i~~~~~-~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv 215 (280)
T TIGR03366 155 PDRRELALSFGATALAEPEVL-AERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAV 215 (280)
T ss_pred HHHHHHHHHcCCcEecCchhh-HHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence 889999999999999887543 355666777665 9999999998764 89999999999985
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=1.2e-27 Score=207.85 Aligned_cols=203 Identities=30% Similarity=0.350 Sum_probs=180.9
Q ss_pred CeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEE
Q 023007 76 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155 (288)
Q Consensus 76 ~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~ 155 (288)
+||+||+.++++|+.|+....+... ..|.++|||++|+|+++|+++.+|++||+|+++. .|+|++|+.++.+.++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~ 75 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--PGAFATHVRVDARLVV 75 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe--cCcccceEEechhheE
Confidence 4799999999999999998877542 3478999999999999999999999999999875 4799999999999999
Q ss_pred EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh
Q 023007 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG 235 (288)
Q Consensus 156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~ 235 (288)
++|+++++.+++.++.++.++|+++.+..++++|++|+|+|++|++|++++++++.+|++++.++ .++++.+.+++
T Consensus 76 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~ 151 (293)
T cd05195 76 KIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATV----GSEEKREFLRE 151 (293)
T ss_pred eCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHH
Confidence 99999999999999999999999998888999999999999889999999999999999999998 57788888888
Q ss_pred CC--CCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 236 LG--ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 236 ~g--~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
++ ++.+++++.. ..+.+.+++.+.+ +|+++||+|+...+.++++++++|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v 206 (293)
T cd05195 152 LGGPVDHIFSSRDLSFADGILRATGGRG-VDVVLNSLSGELLRASWRCLAPFGRFV 206 (293)
T ss_pred hCCCcceEeecCchhHHHHHHHHhCCCC-ceEEEeCCCchHHHHHHHhcccCceEE
Confidence 88 6788887653 3466777777766 999999999987799999999999874
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=1.1e-26 Score=201.67 Aligned_cols=198 Identities=31% Similarity=0.367 Sum_probs=176.1
Q ss_pred EEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCC
Q 023007 80 VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159 (288)
Q Consensus 80 I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~ 159 (288)
||+.++++|+.|+..+.|.++. |.++|||++|+|+++|+++++|++||+|+++. .|+|++|+.++.+.++++|+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~----~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~~~p~ 75 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA--PGSFATYVRTDARLVVPIPD 75 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCC----CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--CCceeeEEEccHHHeEECCC
Confidence 7899999999999988776432 57899999999999999999999999999885 47999999999999999999
Q ss_pred CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-
Q 023007 160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA- 238 (288)
Q Consensus 160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~- 238 (288)
++++.+++.+++++.++|+++.....+.+|++|+|+|++|.+|++++++++.+|++++.++ .++++.+.++++|.
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~ 151 (288)
T smart00829 76 GLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATA----GSPEKRDFLRELGIP 151 (288)
T ss_pred CCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCC
Confidence 9999999999999999999997888999999999999889999999999999999999888 57888888999998
Q ss_pred -CEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 239 -DEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 239 -~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
+.+++++.. ..+.+.+++++.+ +|+++||+|+.....++++++++|+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v 202 (288)
T smart00829 152 DDHIFSSRDLSFADEILRATGGRG-VDVVLNSLAGEFLDASLRCLAPGGRFV 202 (288)
T ss_pred hhheeeCCCccHHHHHHHHhCCCC-cEEEEeCCCHHHHHHHHHhccCCcEEE
Confidence 778877654 3456777777665 999999999876788999999999875
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=6.3e-25 Score=184.29 Aligned_cols=206 Identities=24% Similarity=0.304 Sum_probs=167.9
Q ss_pred CCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccc----cceEEEEEEecCCCCCCCCCCEEEecCCCCcccceE
Q 023007 71 VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGG----YEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 146 (288)
Q Consensus 71 p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~ 146 (288)
.++..++|+||..|.+.+|..+..+....+...-.|..+| ..++|+|++ ++.+++++||.|.+.. +|.+|
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~----gWeey 106 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV----GWEEY 106 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec----cceEE
Confidence 3478899999999999999988777654443222334443 367899988 6788999999999885 89999
Q ss_pred EEeeCCcE--EEcCC--CCChhh-hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 147 VVKDQSVW--HKVSK--DSPMEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 147 ~~~~~~~l--~~ip~--~~~~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++.... .+++. +.++.. ...+.++.+|||-++++++.+++|+||+|.||+|++|+.+.|+|+.+|++|+.++
T Consensus 107 sii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsa- 185 (343)
T KOG1196|consen 107 SVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSA- 185 (343)
T ss_pred EEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEec-
Confidence 99987543 44443 344333 4566778899999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHH-hCCCCEEEeCCcc-cHH-HHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007 222 DRAGSDEAKEKLK-GLGADEVFTESQL-EVK-NVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW 288 (288)
Q Consensus 222 ~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~-~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v 288 (288)
.+.++.+.++ ++|.|..+||.++ +++ .+++.... | +|+.||++|+..++..+..|+..||+.
T Consensus 186 ---GS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~-G-IDiYfeNVGG~~lDavl~nM~~~gri~ 250 (343)
T KOG1196|consen 186 ---GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPE-G-IDIYFENVGGKMLDAVLLNMNLHGRIA 250 (343)
T ss_pred ---CChhhhhhhHhccCCccceeccCccCHHHHHHHhCCC-c-ceEEEeccCcHHHHHHHHhhhhccceE
Confidence 6899999886 6899999999887 554 45554443 4 999999999999999999999999873
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.91 E-value=3.5e-24 Score=204.33 Aligned_cols=211 Identities=21% Similarity=0.190 Sum_probs=185.3
Q ss_pred ceEEEEcCCC---CCCCCeEEEEEeEEecChHHHHHHhCCCCCCC------CCCcccccceEEEEEEecCCCCCCCCCCE
Q 023007 62 VIKMIELPPV---EVKENDVCVKMLAAPINPSDINRIEGVYPVRP------KVPAVGGYEGVGEVYSVGSAVTRLAPGDW 132 (288)
Q Consensus 62 ~~~~~~~~~p---~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 132 (288)
.++|.+-|.. +..++.-+-.|.|+.+|++|+.+..|..+.+. ...+.+|-||+|+ .+-|.|
T Consensus 1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrR 1497 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRR 1497 (2376)
T ss_pred ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcE
Confidence 3788888743 35666668889999999999999998765442 2237789999998 467999
Q ss_pred EEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc
Q 023007 133 VIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR 212 (288)
Q Consensus 133 V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~ 212 (288)
|+++.+. -++++.+.++.+++|.+|+++.+++|++.|+.|.|+||+|..++.+++|+++||++++|++|++||.+|.+.
T Consensus 1498 vM~mvpA-ksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~ 1576 (2376)
T KOG1202|consen 1498 VMGMVPA-KSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAH 1576 (2376)
T ss_pred EEEeeeh-hhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHc
Confidence 9998873 788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007 213 GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ 287 (288)
Q Consensus 213 g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~ 287 (288)
|++|+.++ .+.+|++++. ++...++-|+++.++ +-+...|+|+| +|+|+|....+.++.+++||+..|||
T Consensus 1577 G~~VFTTV----GSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeEkLQASiRCLa~~GRF 1651 (2376)
T KOG1202|consen 1577 GCTVFTTV----GSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEEKLQASIRCLALHGRF 1651 (2376)
T ss_pred CCEEEEec----CcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHHHHHHHHHHHHhcCee
Confidence 99999999 6889998885 566778888888765 45788899998 99999999999999999999999998
Q ss_pred C
Q 023007 288 W 288 (288)
Q Consensus 288 v 288 (288)
.
T Consensus 1652 L 1652 (2376)
T KOG1202|consen 1652 L 1652 (2376)
T ss_pred e
Confidence 4
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.90 E-value=1.5e-22 Score=176.02 Aligned_cols=166 Identities=26% Similarity=0.316 Sum_probs=142.5
Q ss_pred CCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhh
Q 023007 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF 183 (288)
Q Consensus 104 ~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~ 183 (288)
.+|.++|||++|+|+++|+++++|++||+|+++. .|++|+.++.+.++++|+++++.+++.+ .++++||+++. .
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~ 92 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG----PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-D 92 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-h
Confidence 4689999999999999999999999999999863 6899999999999999999999998888 78999999986 5
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCC-CCEEEeCCcccHHHHHHHhcCCCC
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
+++++|++++|+|+ |.+|++++++|+.+|++ ++++. .++++.+.++++| .+.+++... ..+.+.+
T Consensus 93 ~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~- 159 (277)
T cd08255 93 AEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVD----PDAARRELAEALGPADPVAADTA-------DEIGGRG- 159 (277)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEC----CCHHHHHHHHHcCCCccccccch-------hhhcCCC-
Confidence 89999999999975 99999999999999999 88876 5788888889999 565554432 1223434
Q ss_pred ccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007 262 PALGFNCVGGNS-ASKVLKFLRFREEQW 288 (288)
Q Consensus 262 ~D~v~d~~g~~~-~~~a~~~l~~~G~~v 288 (288)
+|++|||++... ...++++++++|+++
T Consensus 160 ~d~vl~~~~~~~~~~~~~~~l~~~g~~~ 187 (277)
T cd08255 160 ADVVIEASGSPSALETALRLLRDRGRVV 187 (277)
T ss_pred CCEEEEccCChHHHHHHHHHhcCCcEEE
Confidence 999999988654 489999999999984
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.74 E-value=9.7e-18 Score=125.52 Aligned_cols=83 Identities=41% Similarity=0.516 Sum_probs=71.6
Q ss_pred CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCC---------------
Q 023007 75 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS--------------- 139 (288)
Q Consensus 75 ~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~--------------- 139 (288)
|+||+||+.++++|++|++.+.+........|.++|||++|+|+++|+++++|++||+|+..+..
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998544445789999999999999999999999999999995521
Q ss_pred -----------CcccceEEEeeCCcEEEc
Q 023007 140 -----------SGTWQSYVVKDQSVWHKV 157 (288)
Q Consensus 140 -----------~G~~a~~~~~~~~~l~~i 157 (288)
+|+|+||+.+|+++++|+
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 899999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.45 E-value=4e-13 Score=103.44 Aligned_cols=84 Identities=30% Similarity=0.336 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCc-ccHHHH
Q 023007 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGG-NSASKV 277 (288)
Q Consensus 200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~a 277 (288)
++|++++|+|+.+|++|++++ .+++++++++++|+++++++++. ..+++++++++.+ +|+||||+|. +..+.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~----~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATD----RSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRG-VDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSS-EEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHhhccccccccccccccccccccccccc-ceEEEEecCcHHHHHHH
Confidence 589999999999999999999 68999999999999999999876 5688999998866 9999999995 555999
Q ss_pred HhhccCCCeeC
Q 023007 278 LKFLRFREEQW 288 (288)
Q Consensus 278 ~~~l~~~G~~v 288 (288)
+++++++|+++
T Consensus 76 ~~~l~~~G~~v 86 (130)
T PF00107_consen 76 IKLLRPGGRIV 86 (130)
T ss_dssp HHHEEEEEEEE
T ss_pred HHHhccCCEEE
Confidence 99999999985
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.98 E-value=6.4e-09 Score=96.84 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=75.5
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc--------------cHH
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL--------------EVK 250 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~--------------~~~ 250 (288)
..++++|+|+|+ |.+|+++++.|+.+|++|+++. .++++++.++++|++.+ ++..+. ..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D----~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~ 236 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFD----TRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIK 236 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHH
Confidence 467999999999 9999999999999999877776 68999999999999855 554321 112
Q ss_pred HHHHH-hcCCCCccEEEECCCcc------c-HHHHHhhccCCCeeC
Q 023007 251 NVKGL-LANLPEPALGFNCVGGN------S-ASKVLKFLRFREEQW 288 (288)
Q Consensus 251 ~i~~~-~~~~g~~D~v~d~~g~~------~-~~~a~~~l~~~G~~v 288 (288)
...+. .+..+++|++|+|+|.+ . ++.+++.++++|++|
T Consensus 237 ~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIV 282 (509)
T PRK09424 237 AEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIV 282 (509)
T ss_pred HHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEE
Confidence 22222 33222499999999963 2 489999999999875
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.62 E-value=2.4e-07 Score=84.40 Aligned_cols=96 Identities=15% Similarity=0.085 Sum_probs=74.5
Q ss_pred HHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007 176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (288)
Q Consensus 176 a~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~ 254 (288)
.|.++.+..+ .-+|++|+|.|. |.+|+.+++.++.+|++|+++. .++.+.+.++.+|++.+ + .+ +
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d----~d~~R~~~A~~~G~~~~-~-----~~---e 253 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTE----VDPICALQAAMEGYEVM-T-----ME---E 253 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE----CChhhHHHHHhcCCEEc-c-----HH---H
Confidence 4566555444 468999999999 9999999999999999988865 57888888899998533 1 11 1
Q ss_pred HhcCCCCccEEEECCCcccH-HHH-HhhccCCCeeC
Q 023007 255 LLANLPEPALGFNCVGGNSA-SKV-LKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~~-~~a-~~~l~~~G~~v 288 (288)
... +.|+||+|+|.+.. +.. +++++++|+++
T Consensus 254 ~v~---~aDVVI~atG~~~~i~~~~l~~mk~Ggilv 286 (413)
T cd00401 254 AVK---EGDIFVTTTGNKDIITGEHFEQMKDGAIVC 286 (413)
T ss_pred HHc---CCCEEEECCCCHHHHHHHHHhcCCCCcEEE
Confidence 112 38999999998775 555 99999999874
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.34 E-value=5.1e-06 Score=77.53 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=71.3
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc--------------ccHHH
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ--------------LEVKN 251 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~--------------~~~~~ 251 (288)
.++++|+|+|+ |.+|+++++.++.+|++|+++. .++++++.++++|.+.+ ++..+ ++.+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d----~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFD----TRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHH
Confidence 45789999999 9999999999999999988877 57889999999998764 33211 11122
Q ss_pred HHHHhcC-CCCccEEEECC---Cccc----HHHHHhhccCCCeeC
Q 023007 252 VKGLLAN-LPEPALGFNCV---GGNS----ASKVLKFLRFREEQW 288 (288)
Q Consensus 252 i~~~~~~-~g~~D~v~d~~---g~~~----~~~a~~~l~~~G~~v 288 (288)
..++... ..++|++|+|+ |.+. ++..++.+++|+.+|
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIV 281 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIV 281 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEE
Confidence 2232221 11499999999 5422 378899999999875
No 132
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.16 E-value=5.6e-05 Score=66.46 Aligned_cols=87 Identities=10% Similarity=0.112 Sum_probs=67.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.+++++|+|. |.+|..+++.++.+|++|+++. .+.++.+.++++|...+. .+.+.+..+ ++|+||+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~----r~~~~~~~~~~~G~~~~~------~~~l~~~l~---~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGA----RKSAHLARITEMGLSPFH------LSELAEEVG---KIDIIFN 216 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHcCCeeec------HHHHHHHhC---CCCEEEE
Confidence 6899999999 9999999999999999998887 467777778888865321 123334434 3999999
Q ss_pred CCCcccH-HHHHhhccCCCeeC
Q 023007 268 CVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 268 ~~g~~~~-~~a~~~l~~~G~~v 288 (288)
|++.... ...++.+++++.++
T Consensus 217 t~p~~~i~~~~l~~~~~g~vII 238 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALII 238 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEE
Confidence 9987655 67778888887653
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.14 E-value=2.4e-05 Score=71.66 Aligned_cols=97 Identities=15% Similarity=0.069 Sum_probs=70.2
Q ss_pred HHHHHHHhhcCCC-CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHH
Q 023007 175 TALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 253 (288)
Q Consensus 175 ta~~~l~~~~~~~-~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~ 253 (288)
..|+++.+..++. .|++|+|.|. |.+|..+++.++.+|++|+++. .++.+...+...|++ +.+ .+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d----~dp~ra~~A~~~G~~-v~~-----l~--- 262 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTE----VDPICALQAAMDGFR-VMT-----ME--- 262 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc----CCchhhHHHHhcCCE-ecC-----HH---
Confidence 3566666654554 8999999999 9999999999999999988876 355555555555654 221 12
Q ss_pred HHhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007 254 GLLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW 288 (288)
Q Consensus 254 ~~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v 288 (288)
+... +.|++|+|+|.... ...++.+++++.++
T Consensus 263 eal~---~aDVVI~aTG~~~vI~~~~~~~mK~Gaili 296 (425)
T PRK05476 263 EAAE---LGDIFVTATGNKDVITAEHMEAMKDGAILA 296 (425)
T ss_pred HHHh---CCCEEEECCCCHHHHHHHHHhcCCCCCEEE
Confidence 2222 39999999998764 46789999998763
No 134
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.99 E-value=7.5e-05 Score=68.05 Aligned_cols=96 Identities=16% Similarity=0.079 Sum_probs=69.8
Q ss_pred HHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007 176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (288)
Q Consensus 176 a~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~ 254 (288)
+|.++.+..+ ...|++|+|.|. |.+|..+++.++.+|++|+++. .++.+...+...|+. +.+ .+.
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d----~dp~r~~~A~~~G~~-v~~-----lee--- 246 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTE----VDPIRALEAAMDGFR-VMT-----MEE--- 246 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEe----CChhhHHHHHhcCCE-eCC-----HHH---
Confidence 4555555434 468999999999 9999999999999999988876 345555555566753 221 111
Q ss_pred HhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007 255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v 288 (288)
... +.|++|+++|.... ...+..+++++.++
T Consensus 247 al~---~aDVVItaTG~~~vI~~~~~~~mK~Gaili 279 (406)
T TIGR00936 247 AAK---IGDIFITATGNKDVIRGEHFENMKDGAIVA 279 (406)
T ss_pred HHh---cCCEEEECCCCHHHHHHHHHhcCCCCcEEE
Confidence 222 38999999998775 45889999998764
No 135
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.97 E-value=6.2e-05 Score=63.04 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=60.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC----CEEEeCCcc-cH-HHHHHHhcCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA----DEVFTESQL-EV-KNVKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~----~~v~~~~~~-~~-~~i~~~~~~~g 260 (288)
+++.++|+|+++++|.+.++.+...|++|+.+. +.+++++.+ .+++. ...+|-.+. .+ ..+..+...++
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~a----RR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAA----RREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEe----ccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 357899999999999999999999999999999 578888766 46773 122333332 22 33555666666
Q ss_pred CccEEEECCCccc
Q 023007 261 EPALGFNCVGGNS 273 (288)
Q Consensus 261 ~~D~v~d~~g~~~ 273 (288)
++|+.+|+.|-..
T Consensus 81 ~iDiLvNNAGl~~ 93 (246)
T COG4221 81 RIDILVNNAGLAL 93 (246)
T ss_pred cccEEEecCCCCc
Confidence 7999999998543
No 136
>PLN02494 adenosylhomocysteinase
Probab=97.94 E-value=0.00011 Score=67.72 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=71.0
Q ss_pred HHHHHHhhcCC-CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007 176 ALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (288)
Q Consensus 176 a~~~l~~~~~~-~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~ 254 (288)
.|.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|+++. .++.+...+...|+..+ + .+.+
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e----~dp~r~~eA~~~G~~vv-~-----leEa-- 306 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTE----IDPICALQALMEGYQVL-T-----LEDV-- 306 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCchhhHHHHhcCCeec-c-----HHHH--
Confidence 35666555444 67999999999 9999999999999999988876 35555555556676422 1 1222
Q ss_pred HhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007 255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW 288 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v 288 (288)
.. ..|++|+|.|.... ...++.|++++.++
T Consensus 307 -l~---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLi 338 (477)
T PLN02494 307 -VS---EADIFVTTTGNKDIIMVDHMRKMKNNAIVC 338 (477)
T ss_pred -Hh---hCCEEEECCCCccchHHHHHhcCCCCCEEE
Confidence 12 38999999998763 88999999998874
No 137
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=9.8e-05 Score=60.69 Aligned_cols=115 Identities=19% Similarity=0.178 Sum_probs=75.8
Q ss_pred hhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244 (288)
Q Consensus 165 ~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~ 244 (288)
..-++.-+.+.|. +.+...+++|++||=+|+ +.|..++-+++..+ +|+.+.+.....+.....++.+|.+.|...
T Consensus 51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~ 125 (209)
T COG2518 51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVR 125 (209)
T ss_pred CCceecCcHHHHH--HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence 3344444445554 335578999999999998 67899999999888 888887432222223344567888655333
Q ss_pred CcccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 245 SQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 245 ~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+.+- ..-+.+.. .||.|+-+.+.+.. +..++.|++||++|
T Consensus 126 ~gDG---~~G~~~~a-PyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv 166 (209)
T COG2518 126 HGDG---SKGWPEEA-PYDRIIVTAAAPEVPEALLDQLKPGGRLV 166 (209)
T ss_pred ECCc---ccCCCCCC-CcCEEEEeeccCCCCHHHHHhcccCCEEE
Confidence 3221 11111222 49998888877776 88899999999985
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.78 E-value=0.00029 Score=60.44 Aligned_cols=134 Identities=15% Similarity=0.175 Sum_probs=83.1
Q ss_pred CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206 (288)
Q Consensus 127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~ 206 (288)
+++||++++.+ +|.+|.. +....+.+++++++..+..-. . ..+...+.. .+.++++||-.|+ |. |..++
T Consensus 67 ~~~g~~~~i~p----~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t-~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~i 135 (250)
T PRK00517 67 IRIGDRLWIVP----SWEDPPD-PDEINIELDPGMAFGTGTHPT-T-RLCLEALEK--LVLPGKTVLDVGC-GS-GILAI 135 (250)
T ss_pred EEEcCCEEEEC----CCcCCCC-CCeEEEEECCCCccCCCCCHH-H-HHHHHHHHh--hcCCCCEEEEeCC-cH-HHHHH
Confidence 57888887765 5666644 677889999998877654211 1 112222322 2568899999999 55 87777
Q ss_pred HHHHHcCCe-EEEEEcCCCCCHHHHHHHHh----CCC-CEEEeCCcccHHHHHHHhcCCCCccEEEECCCccc----HHH
Q 023007 207 QIARHRGIH-SINIIRDRAGSDEAKEKLKG----LGA-DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----ASK 276 (288)
Q Consensus 207 ~la~~~g~~-vi~~~~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~----~~~ 276 (288)
.+++ .|+. ++++. .++...+.+++ .+. +.+... .+...+|+|+.+...+. ...
T Consensus 136 ~~~~-~g~~~v~giD----is~~~l~~A~~n~~~~~~~~~~~~~------------~~~~~fD~Vvani~~~~~~~l~~~ 198 (250)
T PRK00517 136 AAAK-LGAKKVLAVD----IDPQAVEAARENAELNGVELNVYLP------------QGDLKADVIVANILANPLLELAPD 198 (250)
T ss_pred HHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCceEEEc------------cCCCCcCEEEEcCcHHHHHHHHHH
Confidence 6554 5765 66665 46777665543 232 111110 11113999987765432 267
Q ss_pred HHhhccCCCeeC
Q 023007 277 VLKFLRFREEQW 288 (288)
Q Consensus 277 a~~~l~~~G~~v 288 (288)
+.++|+|+|+++
T Consensus 199 ~~~~LkpgG~li 210 (250)
T PRK00517 199 LARLLKPGGRLI 210 (250)
T ss_pred HHHhcCCCcEEE
Confidence 788999999985
No 139
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.75 E-value=0.00099 Score=58.39 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=92.4
Q ss_pred CcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcE----------------------EEcCCCC--
Q 023007 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVW----------------------HKVSKDS-- 161 (288)
Q Consensus 106 p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l----------------------~~ip~~~-- 161 (288)
..+|-+-+ ++|++ +.++++.+|.|+.++.+. ++|+++....+ .++..+.
T Consensus 31 G~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~----ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y 103 (314)
T PF11017_consen 31 GIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPM----ASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAY 103 (314)
T ss_pred cccccceE-EEEEe--eCCCCccCccEEEeeccc----cceeEEeccccCCCccccChhhhCcCchhhhceeecCCCccc
Confidence 34554444 67766 889999999999998764 33333332221 0111111
Q ss_pred --Chhhh-cccccchHHHHHHHHhhc---CCCCCCeEEEeCCCChHHHHHHHHHH--HcCCeEEEEEcCCCCCHHHHHHH
Q 023007 162 --PMEYA-ATIIVNPLTALRMLEDFT---TLNSGDSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKL 233 (288)
Q Consensus 162 --~~~~a-a~l~~~~~ta~~~l~~~~---~~~~g~~vlI~g~~g~vG~~a~~la~--~~g~~vi~~~~~~~~~~~~~~~~ 233 (288)
+.+.. +.+--.+.|.|-. .+.. ..-..+.|+|.+|++..++..+..++ .-+.+++.++ +....++.
T Consensus 104 ~~~~e~~~~LlrPLf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-----S~~N~~Fv 177 (314)
T PF11017_consen 104 DPEREDWQMLLRPLFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-----SARNVAFV 177 (314)
T ss_pred CcchhHHHHHHHHHHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-----cCcchhhh
Confidence 11111 1222133455532 2221 12344789999999999999888888 4456888888 67777899
Q ss_pred HhCCC-CEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007 234 KGLGA-DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 234 ~~~g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
+.+|+ |.++.|++ +..+... .--+++|+.|+..+
T Consensus 178 e~lg~Yd~V~~Yd~-----i~~l~~~--~~~v~VDfaG~~~~ 212 (314)
T PF11017_consen 178 ESLGCYDEVLTYDD-----IDSLDAP--QPVVIVDFAGNGEV 212 (314)
T ss_pred hccCCceEEeehhh-----hhhccCC--CCEEEEECCCCHHH
Confidence 99996 77777643 4444333 36789999999776
No 140
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.74 E-value=0.00026 Score=59.77 Aligned_cols=80 Identities=18% Similarity=0.166 Sum_probs=50.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-Hh---CCCCEEEeCC--c-ccHHHHHH-HhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG---LGADEVFTES--Q-LEVKNVKG-LLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~---~g~~~v~~~~--~-~~~~~i~~-~~~~~ 259 (288)
++++|+|+|++|++|..+++.+...|++|+.+.+ ++++.+.+ +. .+.-+.+..+ + ...+.+.+ .....
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR----NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999984 55555443 22 2222222221 1 11222211 11112
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|.++.+.|.
T Consensus 80 ~~id~ii~~ag~ 91 (238)
T PRK05786 80 NAIDGLVVTVGG 91 (238)
T ss_pred CCCCEEEEcCCC
Confidence 248999999874
No 141
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.72 E-value=8.9e-05 Score=64.38 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=61.5
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHh----CCCCEEEeCCcccHHHHHHHhc
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA 257 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~i~~~~~ 257 (288)
+.+++|++||.+|+ |. |..++++++..|. +++++. .+++..+.+++ .+.+.+.... . .+..+.-
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD----~s~~~l~~A~~~~~~~g~~~v~~~~-~---d~~~l~~ 142 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVD----MTPEMLAKARANARKAGYTNVEFRL-G---EIEALPV 142 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEEC----CCHHHHHHHHHHHHHcCCCCEEEEE-c---chhhCCC
Confidence 56889999999998 66 8888888888775 477765 57777777754 4443221111 1 1222221
Q ss_pred CCCCccEEEECCC-----c--ccHHHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVG-----G--NSASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g-----~--~~~~~a~~~l~~~G~~v 288 (288)
..+.+|+|+.+.. + ..+..+.+.|+|||+|+
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~ 180 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFA 180 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEE
Confidence 1124999886532 2 23488999999999984
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=97.72 E-value=0.00013 Score=71.71 Aligned_cols=115 Identities=13% Similarity=0.063 Sum_probs=70.0
Q ss_pred cccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 141 G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
.++++|..+++..++.+ +.++++++.....+ ..+..+|++++|+|++|++|...++.+...|++|+++.
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 45567777777666666 55565555321100 12234689999999999999999999999999999888
Q ss_pred cCCCCCHHHHHHH-HhCCC--C-EE--EeCCc-ccHHH-HHHHhcCCCCccEEEECCC
Q 023007 221 RDRAGSDEAKEKL-KGLGA--D-EV--FTESQ-LEVKN-VKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 221 ~~~~~~~~~~~~~-~~~g~--~-~v--~~~~~-~~~~~-i~~~~~~~g~~D~v~d~~g 270 (288)
+ ++++.+.+ +.++. . .+ .|-.+ ..++. +.+.....|++|++|+|.|
T Consensus 454 r----~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 L----DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred C----CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4 55554433 33443 1 11 12222 12222 2222222335999999998
No 143
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.70 E-value=0.00012 Score=70.39 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=64.3
Q ss_pred CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-----------------CCHHHHHHHHhCCCCEEEeCCc-
Q 023007 185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----------------GSDEAKEKLKGLGADEVFTESQ- 246 (288)
Q Consensus 185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~g~~~v~~~~~- 246 (288)
..++|++|+|+|+ |+.|+++++.++..|++|+++...+. ..+++.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3678999999999 99999999999999999888753210 1245567788999887776543
Q ss_pred ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCC
Q 023007 247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFRE 285 (288)
Q Consensus 247 ~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G 285 (288)
.+.. ...+.. ++|+||+++|.... ...+.....+|
T Consensus 212 ~~~~-~~~~~~---~~D~Vi~AtG~~~~~~~~i~g~~~~g 247 (564)
T PRK12771 212 EDIT-LEQLEG---EFDAVFVAIGAQLGKRLPIPGEDAAG 247 (564)
T ss_pred CcCC-HHHHHh---hCCEEEEeeCCCCCCcCCCCCCccCC
Confidence 2110 111111 39999999997643 33333333444
No 144
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.68 E-value=0.00048 Score=59.10 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=56.9
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-h----CCCCE-EEeCC--c-ccHHHHHHHh
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G----LGADE-VFTES--Q-LEVKNVKGLL 256 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~----~g~~~-v~~~~--~-~~~~~i~~~~ 256 (288)
...+++++|+||++++|...+..+...|++++.+. +++++++.+. + .+... ++.-+ + ...+.+....
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLva----R~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l 78 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVA----RREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL 78 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEe----CcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH
Confidence 34678999999999999999999999999999999 5788876553 2 33322 32221 1 2334444433
Q ss_pred cCC-CCccEEEECCCc
Q 023007 257 ANL-PEPALGFNCVGG 271 (288)
Q Consensus 257 ~~~-g~~D~v~d~~g~ 271 (288)
... +.+|+.+||+|-
T Consensus 79 ~~~~~~IdvLVNNAG~ 94 (265)
T COG0300 79 KERGGPIDVLVNNAGF 94 (265)
T ss_pred HhcCCcccEEEECCCc
Confidence 332 359999999985
No 145
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00047 Score=58.41 Aligned_cols=79 Identities=22% Similarity=0.268 Sum_probs=52.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
++++++|+|++|++|...++.+...|++|+++. .++++.+.+ +..+... +..+-.+.+.+.+.....+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~----r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAA----RNAAALDRLAGETGCEP-LRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCeE-EEecCCCHHHHHHHHHHhCCCCEEE
Confidence 568999999999999999999999999999888 355555444 3444432 2222122223333333233599999
Q ss_pred ECCCc
Q 023007 267 NCVGG 271 (288)
Q Consensus 267 d~~g~ 271 (288)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 99985
No 146
>PRK12742 oxidoreductase; Provisional
Probab=97.62 E-value=0.00052 Score=57.85 Aligned_cols=80 Identities=16% Similarity=0.182 Sum_probs=52.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
++++++|+|++|++|...++.+...|++++.+.+. ++++.+. ..+++...+ ..+-.+.+.+.+.....+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG---SKDAAERLAQETGATAV-QTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHhCCCcEEE
Confidence 46899999999999999999999999998877532 3444433 345565432 222222233333333233599999
Q ss_pred ECCCc
Q 023007 267 NCVGG 271 (288)
Q Consensus 267 d~~g~ 271 (288)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99875
No 147
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.58 E-value=0.0015 Score=57.20 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=61.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++++|+|. |.+|..++..++.+|++|++.. +++++.+.+.+.|...+ . .+.+.+... +.|+||+
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~----R~~~~~~~~~~~g~~~~-~-----~~~l~~~l~---~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGA----RSSADLARITEMGLIPF-P-----LNKLEEKVA---EIDIVIN 215 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHCCCeee-c-----HHHHHHHhc---cCCEEEE
Confidence 5789999999 9999999999999999998887 46666666666664322 1 123333333 3999999
Q ss_pred CCCcccH-HHHHhhccCCCee
Q 023007 268 CVGGNSA-SKVLKFLRFREEQ 287 (288)
Q Consensus 268 ~~g~~~~-~~a~~~l~~~G~~ 287 (288)
|+..... ...++.++++..+
T Consensus 216 t~P~~ii~~~~l~~~k~~ali 236 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVI 236 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEE
Confidence 9977655 5567777775443
No 148
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.57 E-value=0.00086 Score=60.88 Aligned_cols=91 Identities=12% Similarity=0.114 Sum_probs=61.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
++.+|+|+|+ |.+|+.+++.++.+|++|+++. .++++.+.+. .++........ ..+.+.+... +.|++|
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d----~~~~~~~~l~~~~g~~v~~~~~--~~~~l~~~l~---~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILD----INIDRLRQLDAEFGGRIHTRYS--NAYEIEDAVK---RADLLI 235 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEE----CCHHHHHHHHHhcCceeEeccC--CHHHHHHHHc---cCCEEE
Confidence 3456999999 9999999999999999987776 4666666554 45543211111 1223344333 399999
Q ss_pred ECC---Cc--cc--HHHHHhhccCCCeeC
Q 023007 267 NCV---GG--NS--ASKVLKFLRFREEQW 288 (288)
Q Consensus 267 d~~---g~--~~--~~~a~~~l~~~G~~v 288 (288)
+|+ +. +. ....++.+++++.++
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIv 264 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIV 264 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEE
Confidence 998 32 22 277788899988764
No 149
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.55 E-value=0.00049 Score=60.98 Aligned_cols=109 Identities=19% Similarity=0.173 Sum_probs=72.9
Q ss_pred CcEEEcCCCCChhhhcccccchHHHHHHHHhhcCC---CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHH
Q 023007 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL---NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228 (288)
Q Consensus 152 ~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~ 228 (288)
...+++|+.+..+.++... +...++.++...... -++.+|+|.|+ |.+|..+++.++..|++.+.+++ .+++
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~---r~~~ 213 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIAN---RTYE 213 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEe---CCHH
Confidence 3446678888877776655 566676666442222 47899999999 99999999999988865444442 4555
Q ss_pred HH-HHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007 229 AK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 229 ~~-~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
+. ++++++|.. +++. +.+.+... +.|+||.|++.+..
T Consensus 214 ra~~la~~~g~~-~~~~-----~~~~~~l~---~aDvVi~at~~~~~ 251 (311)
T cd05213 214 RAEELAKELGGN-AVPL-----DELLELLN---EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHHHcCCe-EEeH-----HHHHHHHh---cCCEEEECCCCCch
Confidence 54 566788873 3322 22223222 38999999998765
No 150
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.51 E-value=0.0017 Score=60.15 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=66.1
Q ss_pred HHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHh
Q 023007 178 RMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL 256 (288)
Q Consensus 178 ~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~ 256 (288)
.++.+.. ..-.|++|+|.|. |.+|..+++.++.+|++|+++. .++.+...+...|+..+ + ++. +.
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e----~dp~~a~~A~~~G~~~~-~-----lee---ll 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTE----IDPICALQAAMEGYQVV-T-----LED---VV 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCchhHHHHHhcCceec-c-----HHH---HH
Confidence 4443332 3457999999999 9999999999999999988876 34444433334565321 1 222 22
Q ss_pred cCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007 257 ANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW 288 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v 288 (288)
. ..|+|+.|+|.... ...++.|++++.++
T Consensus 308 ~---~ADIVI~atGt~~iI~~e~~~~MKpGAiLI 338 (476)
T PTZ00075 308 E---TADIFVTATGNKDIITLEHMRRMKNNAIVG 338 (476)
T ss_pred h---cCCEEEECCCcccccCHHHHhccCCCcEEE
Confidence 2 39999999998665 68899999998874
No 151
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.50 E-value=0.00088 Score=54.68 Aligned_cols=80 Identities=19% Similarity=0.208 Sum_probs=57.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC---EEEeCCccc-HHHHHH-HhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLE-VKNVKG-LLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~-~~~i~~-~~~~~g~~ 262 (288)
-|-||||+|+++++|+..++-....|-+||++. +++++++.++..-.+ .+.|-.+.+ ...+.+ +.+..+.+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~g----R~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICG----RNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEec----CcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 367999999999999999999999999999999 689999888754432 233322221 222333 33334458
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
++++||.|-
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 999999984
No 152
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0011 Score=57.45 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=53.3
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHHH-HHHhcCCCCccEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNV-KGLLANLPEPALGF 266 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~i-~~~~~~~g~~D~v~ 266 (288)
++++|+|++|++|...++.+...|++|+++. .++++.+.+...+...+ .|..+ ..++.+ .......+++|++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 77 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATA----RKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI 77 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5799999999999999999989999999988 45666666655554433 33322 222222 22222233599999
Q ss_pred ECCCc
Q 023007 267 NCVGG 271 (288)
Q Consensus 267 d~~g~ 271 (288)
++.|.
T Consensus 78 ~~ag~ 82 (274)
T PRK05693 78 NNAGY 82 (274)
T ss_pred ECCCC
Confidence 99984
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0012 Score=57.37 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=53.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHH----HHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN----VKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~----i~~~~~~~g~ 261 (288)
.+++++|+|++|++|...++.+...|++|+++. .++++.+.+...+...+ .|-.+. .++. +.+...+ +
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~----r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g--~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATC----RKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGG--R 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCC--C
Confidence 467999999999999999998888999999998 46666666666555433 232222 2222 2222223 5
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 77 id~li~~Ag~ 86 (277)
T PRK05993 77 LDALFNNGAY 86 (277)
T ss_pred ccEEEECCCc
Confidence 9999999873
No 154
>PRK06182 short chain dehydrogenase; Validated
Probab=97.48 E-value=0.00085 Score=58.06 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=53.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHH-HHHHhcCCCCccE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL 264 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~-i~~~~~~~g~~D~ 264 (288)
++++++|+|++|++|...++.+...|++|+++. .++++.+.+...+...+ .|-.+. .++. +.+.....+++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~----r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAA----RRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 467999999999999999999888999999998 45666655544444322 232221 2222 2222222335999
Q ss_pred EEECCCc
Q 023007 265 GFNCVGG 271 (288)
Q Consensus 265 v~d~~g~ 271 (288)
+|++.|.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999984
No 155
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00064 Score=60.80 Aligned_cols=80 Identities=25% Similarity=0.279 Sum_probs=52.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCc-ccHHHHHH-HhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQ-LEVKNVKG-LLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~ 258 (288)
++++++|+|+++++|.+.++.+...|++|+++.+ ++++.+ .+++.|.+.. + |-.+ ..++.+.+ ....
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R----~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAAR----DEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999884 555543 3345565432 2 2221 12222221 1111
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|+|.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999984
No 156
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.44 E-value=0.0011 Score=53.72 Aligned_cols=70 Identities=23% Similarity=0.360 Sum_probs=53.0
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~ 271 (288)
|+|+|++|.+|...++.+...|.+|+++++ ++++.+. ..+.+ ++..+-.+.+.+.+...+ +|+||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R----~~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~---~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVR----SPSKAED--SPGVE-IIQGDLFDPDSVKAALKG---ADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEES----SGGGHHH--CTTEE-EEESCTTCHHHHHHHHTT---SSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEec----Cchhccc--ccccc-cceeeehhhhhhhhhhhh---cchhhhhhhh
Confidence 789999999999999999999999999994 5666555 33433 333333444666666664 9999999984
No 157
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00098 Score=56.06 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=50.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHHH-HHHhcCCCCccE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNV-KGLLANLPEPAL 264 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~i-~~~~~~~g~~D~ 264 (288)
+++++||+|++|.+|..+++.+...|++|+++.++....++..+.++..+...+ .|-.+ ..++.+ .......+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 478999999999999999998888899999998532111122223333343322 22221 112222 222222335999
Q ss_pred EEECCCc
Q 023007 265 GFNCVGG 271 (288)
Q Consensus 265 v~d~~g~ 271 (288)
+|++.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999874
No 158
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.34 E-value=0.0022 Score=55.41 Aligned_cols=85 Identities=19% Similarity=0.251 Sum_probs=56.1
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EEeCC-cccHHH-HHHHhcCCCCc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTES-QLEVKN-VKGLLANLPEP 262 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~~~~-~~~~~~-i~~~~~~~g~~ 262 (288)
-.|+.|||+|+++++|.+.++-...+|++++...-+....++..+..++.|..+ +.|-. .+++.+ ..+..+.-|.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 468999999999999988666666668887777666667777778888777222 22222 222211 11122223369
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|+++|++|-
T Consensus 116 ~ILVNNAGI 124 (300)
T KOG1201|consen 116 DILVNNAGI 124 (300)
T ss_pred eEEEecccc
Confidence 999999884
No 159
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0014 Score=57.46 Aligned_cols=80 Identities=18% Similarity=0.281 Sum_probs=50.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EEeCC--c-ccHHHHHH-HhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTES--Q-LEVKNVKG-LLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~~~~--~-~~~~~i~~-~~~~ 258 (288)
.+++++|+|++|++|...++.+...|++|+++.+ ++++.+.+ .+.+.+. ++..+ + ..++.+.+ ....
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R----~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVAR----REDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999888888999999984 45544333 2334332 22111 1 11222221 1122
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|+|.|.
T Consensus 115 ~g~id~li~~AG~ 127 (293)
T PRK05866 115 IGGVDILINNAGR 127 (293)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999985
No 160
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.30 E-value=0.0023 Score=60.73 Aligned_cols=84 Identities=19% Similarity=0.205 Sum_probs=55.9
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----h-----CCC-----CEEEeCCcc
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----G-----LGA-----DEVFTESQL 247 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~-----~g~-----~~v~~~~~~ 247 (288)
...+.+.|++|+|+|++|.+|...++.+...|++|+++++ +.++.+.+. + .|. -.++..+-.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R----n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt 148 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR----SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE 148 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence 3356778999999999999999999999889999999984 555543321 1 121 112221222
Q ss_pred cHHHHHHHhcCCCCccEEEECCCcc
Q 023007 248 EVKNVKGLLANLPEPALGFNCVGGN 272 (288)
Q Consensus 248 ~~~~i~~~~~~~g~~D~v~d~~g~~ 272 (288)
+.+.+....+ ++|+||+|.|..
T Consensus 149 D~esI~~aLg---giDiVVn~AG~~ 170 (576)
T PLN03209 149 KPDQIGPALG---NASVVICCIGAS 170 (576)
T ss_pred CHHHHHHHhc---CCCEEEEccccc
Confidence 2345555444 399999998853
No 161
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0016 Score=55.56 Aligned_cols=77 Identities=16% Similarity=0.084 Sum_probs=50.2
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
+++++|+|++|++|...++.+...|++|+++++ ++++.+.+ +..+.. .++..+-.+.+.+.....+ ++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ----IAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW--DVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC--CCC
Confidence 468999999999999999999999999999984 44433332 233332 1111111122344444333 499
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
++|+|.|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999883
No 162
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.26 E-value=0.0035 Score=51.71 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=62.8
Q ss_pred hcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH----HhCC-CCEEEeCCcccHHHHHHH
Q 023007 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLG-ADEVFTESQLEVKNVKGL 255 (288)
Q Consensus 183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g-~~~v~~~~~~~~~~i~~~ 255 (288)
...+.++++|+-.|+ |. |..++.+++..+ .+++++. .+++..+.+ +.++ .+.+.....+..+.+...
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD----~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~ 108 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVD----KDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTI 108 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEE----CCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhc
Confidence 367889999999999 55 888888888764 5777776 567776654 3466 333322211111222222
Q ss_pred hcCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007 256 LANLPEPALGFNCVGGN----SASKVLKFLRFREEQW 288 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v 288 (288)
.+ .+|.||.+.+.. .+..+.++|+|+|+++
T Consensus 109 -~~--~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv 142 (198)
T PRK00377 109 -NE--KFDRIFIGGGSEKLKEIISASWEIIKKGGRIV 142 (198)
T ss_pred -CC--CCCEEEECCCcccHHHHHHHHHHHcCCCcEEE
Confidence 22 499999866532 2377788999999975
No 163
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0015 Score=57.37 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=52.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--CEE---EeCCcc-cHHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--DEV---FTESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~~v---~~~~~~-~~~~-i~~~~~~~ 259 (288)
+|++++|+|++|++|...++.+...|++|+++. .++++.+.+ ++++. +.. .|-.+. .++. +.+.....
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVD----LEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999888 455555433 44542 111 222221 1222 22222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 84 g~id~vI~nAG~ 95 (296)
T PRK05872 84 GGIDVVVANAGI 95 (296)
T ss_pred CCCCEEEECCCc
Confidence 359999999985
No 164
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.24 E-value=0.0015 Score=50.54 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH-HhCCCC--EEEeCCcccHHHHHHHhcCCCCcc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-KGLGAD--EVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
++++++|+|+ |++|.+++..+...|++ ++++. ++.++.+.+ +.++.. .++...+ +.+... ++|
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~n----Rt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~---~~D 77 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVN----RTPERAEALAEEFGGVNIEAIPLED-----LEEALQ---EAD 77 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEE----SSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH---TES
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEE----CCHHHHHHHHHHcCccccceeeHHH-----HHHHHh---hCC
Confidence 5799999999 99999999999999997 66666 566766544 455322 2333322 222223 399
Q ss_pred EEEECCCccc
Q 023007 264 LGFNCVGGNS 273 (288)
Q Consensus 264 ~v~d~~g~~~ 273 (288)
+||+|++..+
T Consensus 78 ivI~aT~~~~ 87 (135)
T PF01488_consen 78 IVINATPSGM 87 (135)
T ss_dssp EEEE-SSTTS
T ss_pred eEEEecCCCC
Confidence 9999998754
No 165
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0025 Score=54.40 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcc---cHH-HHHHHhc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQL---EVK-NVKGLLA 257 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~---~~~-~i~~~~~ 257 (288)
..+++++|+|++|.+|..++..+...|++|+++.+ ++++.+.+. ..+.. .++..+-. .+. .+.+...
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR----RVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999884 555544332 22221 22221111 121 1222222
Q ss_pred CCCCccEEEECCCc
Q 023007 258 NLPEPALGFNCVGG 271 (288)
Q Consensus 258 ~~g~~D~v~d~~g~ 271 (288)
..+++|++|+|.|.
T Consensus 83 ~~~~~d~li~~ag~ 96 (258)
T PRK06949 83 EAGTIDILVNNSGV 96 (258)
T ss_pred hcCCCCEEEECCCC
Confidence 23359999999984
No 166
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0022 Score=54.84 Aligned_cols=80 Identities=18% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEE-EeCCcc-cHHHHHH-HhcCCCCcc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQL-EVKNVKG-LLANLPEPA 263 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v-~~~~~~-~~~~i~~-~~~~~g~~D 263 (288)
+|++|+|+|++|++|...++.+...|++|+++.+ ++.+.+. ..+++...+ .|..+. .++.+.+ ..+..+++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI----DPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999874 4444433 344543222 232222 2222222 222223599
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
++|++.|.
T Consensus 82 ~vi~~ag~ 89 (255)
T PRK06057 82 IAFNNAGI 89 (255)
T ss_pred EEEECCCc
Confidence 99999874
No 167
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.22 E-value=0.0017 Score=56.13 Aligned_cols=83 Identities=24% Similarity=0.295 Sum_probs=52.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCE-EEeCC-----cccHHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VFTES-----QLEVKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~-v~~~~-----~~~~~~-i~~~~~~~ 259 (288)
.|+.|+|+||++++|.+.+.-....|++++.+++... ..++. +.+++.+... ++... .++.+. +.......
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~r-rl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRAR-RLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhh-hHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5689999999999998877777777999888885432 22333 4555665444 32211 112222 22222334
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
|++|+.+|+.|-
T Consensus 90 g~vDvLVNNAG~ 101 (282)
T KOG1205|consen 90 GRVDVLVNNAGI 101 (282)
T ss_pred CCCCEEEecCcc
Confidence 569999999884
No 168
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.22 E-value=0.0024 Score=54.90 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=51.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCC-EEE--eCCcc-cH-HHHHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EV-KNVKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~-~v~--~~~~~-~~-~~i~~~~~~~g~ 261 (288)
++++++|+|++|++|...++.+...|++|+++. .++++.+.+.+ .+.. ..+ |-.+. .. +.+.+.....++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD----KSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999999887 45555554443 3322 112 22221 11 222232222335
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 80 id~li~~Ag~ 89 (262)
T TIGR03325 80 IDCLIPNAGI 89 (262)
T ss_pred CCEEEECCCC
Confidence 9999999873
No 169
>PRK06128 oxidoreductase; Provisional
Probab=97.21 E-value=0.0036 Score=55.02 Aligned_cols=84 Identities=15% Similarity=0.127 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHhCCCCEEE---eCCc-ccHHH-HHHHhcCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKLKGLGADEVF---TESQ-LEVKN-VKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g 260 (288)
.|+++||+|++|++|...++.+...|++|+++...... .++..+.++..+....+ |-.+ ..++. +.+.....+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999888899999877532110 11122334445543222 1111 11222 222222233
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|++.|.
T Consensus 134 ~iD~lV~nAg~ 144 (300)
T PRK06128 134 GLDILVNIAGK 144 (300)
T ss_pred CCCEEEECCcc
Confidence 59999999884
No 170
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.002 Score=55.02 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=50.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCcc-cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQL-EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~ 258 (288)
++++++|+|+++++|...++.+...|++|+.+.+ ++++.+. +++.+.+.. + |-.+. .++. +.+....
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR----RQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999988889999999884 4444432 233443322 2 21111 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 81 ~~~id~li~~ag~ 93 (254)
T PRK07478 81 FGGLDIAFNNAGT 93 (254)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999984
No 171
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.21 E-value=0.0019 Score=54.89 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=50.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+.+.+ ++++.+. ++..+... .+ |-.+ ..++. +......
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL----NQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988874 4444332 23344432 12 2111 12222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|.+|++.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (253)
T PRK08217 80 FGQLNGLINNAGI 92 (253)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999883
No 172
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0056 Score=51.95 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
++++++|+|++|++|...+..+...|++|+++.+.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999999999888899999988753
No 173
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0023 Score=54.86 Aligned_cols=80 Identities=21% Similarity=0.269 Sum_probs=50.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHh-CCCC-EEEeCCcccHHHHHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGAD-EVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~g~~-~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
.+++++|+|+++++|...++.+...|++|+++.+ ++++.+. +++ .+.. .++..+-.+.+.+.++....++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR----DADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 4689999999999999999888889999999884 4444332 222 2322 2222221222333333333346
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 174
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0031 Score=53.93 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=48.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++++|+|++|++|...++.+...|++|+++.+.. .+..+... .+....+..+-.+.+.+.+..+ ++|++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~---~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK---INNSESND-ESPNEWIKWECGKEESLDKQLA---SLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc---hhhhhhhc-cCCCeEEEeeCCCHHHHHHhcC---CCCEEEE
Confidence 368999999999999999998889999999987531 12222111 1111222222122234444332 4999999
Q ss_pred CCCc
Q 023007 268 CVGG 271 (288)
Q Consensus 268 ~~g~ 271 (288)
|.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9985
No 175
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.19 E-value=0.0025 Score=55.26 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=50.1
Q ss_pred CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHH-HHHHhcCCC
Q 023007 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~-i~~~~~~~g 260 (288)
++++++|+|+++ ++|.+.++.+...|++|+++.+... ..++.+.+ +++|....+ |-.+ ..++. +.+.....|
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 568999999986 9999999988889999998764211 11222222 345543322 2111 12222 222222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 69999999984
No 176
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0028 Score=54.38 Aligned_cols=82 Identities=17% Similarity=0.177 Sum_probs=51.2
Q ss_pred CCCCCeEEEeCCCC-hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHh-CCCCEE--E--eCCc-ccHHHHHH
Q 023007 186 LNSGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGADEV--F--TESQ-LEVKNVKG 254 (288)
Q Consensus 186 ~~~g~~vlI~g~~g-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~g~~~v--~--~~~~-~~~~~i~~ 254 (288)
+.++++++|+|++| ++|.+.++.+...|++|+++.+ ++++.+. +++ ++...+ + |-.+ ..++.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDI----HERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 44578999999986 8999999999999999888774 3433322 222 453332 2 2222 12233222
Q ss_pred H-hcCCCCccEEEECCCc
Q 023007 255 L-LANLPEPALGFNCVGG 271 (288)
Q Consensus 255 ~-~~~~g~~D~v~d~~g~ 271 (288)
. .+..|++|++|+|.|.
T Consensus 90 ~~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 2 1222359999999984
No 177
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.15 E-value=0.0027 Score=54.34 Aligned_cols=84 Identities=14% Similarity=0.176 Sum_probs=50.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcccHHHH----HHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNV----KGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i----~~~~~~~g~~ 262 (288)
+++++||+|++|.+|...++.+...|++|+++.+.....++..+.+++.+.... +..+-.+.+.+ .......+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999888532111122233344554322 22111111222 1111122359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|.|.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999985
No 178
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0024 Score=55.50 Aligned_cols=80 Identities=19% Similarity=0.126 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCC--c-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTES--Q-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~ 258 (288)
.|++++|+|++|++|.+.++.+...|++|+++.+ ++++.+ .++..+.+.. +..+ + ..++. +.+....
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r----~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDV----DKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999998899999988873 444333 2233343321 2111 1 11222 1222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|++.|.
T Consensus 81 ~g~id~li~nAg~ 93 (275)
T PRK05876 81 LGHVDVVFSNAGI 93 (275)
T ss_pred cCCCCEEEECCCc
Confidence 3459999999984
No 179
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0022 Score=57.37 Aligned_cols=80 Identities=18% Similarity=0.210 Sum_probs=52.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHHHHH-HhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKNVKG-LLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+++.+ ++++.+. +++.|.+.. + |-.+ ..++.+.+ ....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R----~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLAR----GEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999889999999884 4554432 334554432 1 2222 12222222 2222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|++.|.
T Consensus 83 ~g~iD~lInnAg~ 95 (334)
T PRK07109 83 LGPIDTWVNNAMV 95 (334)
T ss_pred CCCCCEEEECCCc
Confidence 3469999999984
No 180
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.14 E-value=0.0028 Score=54.45 Aligned_cols=80 Identities=15% Similarity=0.159 Sum_probs=51.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC-EEE--eCCc-ccHH-HHHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVF--TESQ-LEVK-NVKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~-~v~--~~~~-~~~~-~i~~~~~~~g~ 261 (288)
++++++|+|+++++|...++.+...|++|+++. .++++.+.+. +++.. .++ |-.+ ...+ .+.+.....++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLE----RSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999999999887 4555555443 34321 122 2111 1122 22222223345
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|++.|.
T Consensus 81 id~li~~ag~ 90 (263)
T PRK06200 81 LDCFVGNAGI 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 181
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0025 Score=54.41 Aligned_cols=80 Identities=21% Similarity=0.192 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-E--EeCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-V--FTESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v--~~~~~-~~~~~-i~~~~~~ 258 (288)
.|++++|+|+++++|...++.+...|++|+++.+ ++++.+.+ +..+... . .|-.+ ..++. +.+....
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAAR----HLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998874 44444322 2333221 1 12211 11222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|+|.|.
T Consensus 84 ~g~id~lv~~ag~ 96 (253)
T PRK05867 84 LGGIDIAVCNAGI 96 (253)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999874
No 182
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0021 Score=55.43 Aligned_cols=80 Identities=20% Similarity=0.319 Sum_probs=50.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCC-EEE--eCCc-ccHHHHHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GAD-EVF--TESQ-LEVKNVKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~-~v~--~~~~-~~~~~i~~~~~~ 258 (288)
+|++++|+|+++++|.+.++.+...|++|+++.+ ++++.+.+ +++ +.+ ..+ |-.+ ..++.+.+....
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSR----NEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 5789999999999999999999999999998874 44444332 121 322 122 2111 122222221122
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|+++++.|.
T Consensus 83 ~g~iD~lv~nag~ 95 (263)
T PRK08339 83 IGEPDIFFFSTGG 95 (263)
T ss_pred hCCCcEEEECCCC
Confidence 3469999999874
No 183
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.10 E-value=0.0035 Score=53.54 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=51.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHHHH-HHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKNVK-GLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~i~-~~~~~~g~~ 262 (288)
+|++++|+|+++++|.+.++.+...|++|+++.+. ..++..+.+++.+.+.. + |-.+ ..++.+. +.....|++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA--EAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc--hHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999887632 11222334455554321 2 2211 1222222 222223469
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++++|.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 184
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0029 Score=53.95 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQL---EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+++.+ ++++. +.+++.+... .+..+-. .++. +......
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADR----DAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999888888999999985 44332 2334444321 2211111 1221 1222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 82 ~g~id~li~~ag~ 94 (253)
T PRK06172 82 YGRLDYAFNNAGI 94 (253)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999874
No 185
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.10 E-value=0.00012 Score=55.74 Aligned_cols=45 Identities=27% Similarity=0.245 Sum_probs=32.2
Q ss_pred CCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC--cccH-HHHHhhccCCCeeC
Q 023007 236 LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG--GNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 236 ~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g--~~~~-~~a~~~l~~~G~~v 288 (288)
||+++++||+..++ +... ++|+||||+| ++.+ ..++++| ++|+||
T Consensus 1 LGAd~vidy~~~~~------~~~~-~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v 48 (127)
T PF13602_consen 1 LGADEVIDYRDTDF------AGPG-GVDVVIDTVGQTGESLLDASRKLL-PGGRVV 48 (127)
T ss_dssp CT-SEEEETTCSHH------HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEE
T ss_pred CCcCEEecCCCccc------cCCC-CceEEEECCCCccHHHHHHHHHHC-CCCEEE
Confidence 69999999996554 3333 4999999999 5554 6667888 999975
No 186
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.10 E-value=0.0034 Score=53.89 Aligned_cols=83 Identities=11% Similarity=0.020 Sum_probs=49.5
Q ss_pred CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCc---ccHHHHH-HHhcCCC
Q 023007 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQ---LEVKNVK-GLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~---~~~~~i~-~~~~~~g 260 (288)
.|++++|+|++ +++|.+.++.+...|++|+++.+... ..+..+.+ ++++...++.-+- ..++.+. ......|
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-ARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999997 48999999888889999988874311 11222322 3444322332221 1222222 2222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 69999999874
No 187
>PRK08017 oxidoreductase; Provisional
Probab=97.10 E-value=0.0055 Score=52.23 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=53.2
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cH----HHHHHHhcCCCCcc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EV----KNVKGLLANLPEPA 263 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~----~~i~~~~~~~g~~D 263 (288)
++++|+|++|++|...++.+...|++|+++. .++++.+.+++.+...+ .|..+. .+ +.+.....+ ++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~----r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~--~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAAC----RKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDN--RLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCC--CCe
Confidence 5799999999999999999999999998888 46677777766776543 232221 11 223332223 489
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
.++++.|.
T Consensus 77 ~ii~~ag~ 84 (256)
T PRK08017 77 GLFNNAGF 84 (256)
T ss_pred EEEECCCC
Confidence 99999874
No 188
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.10 E-value=0.0033 Score=57.36 Aligned_cols=104 Identities=15% Similarity=0.071 Sum_probs=69.3
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHH
Q 023007 173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 252 (288)
Q Consensus 173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i 252 (288)
....+..+.+...+++|++||-+|+ +.|..+..+++..|++|+++. .+++..+.+++.....-+.....+ .
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giD----lS~~~l~~A~~~~~~l~v~~~~~D---~ 222 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVT----ISAEQQKLAQERCAGLPVEIRLQD---Y 222 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhccCeEEEEECc---h
Confidence 4445555666678899999999998 577888889998899999987 688888888653321111111111 1
Q ss_pred HHHhcCCCCccEEEEC-----CCcc----cHHHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPALGFNC-----VGGN----SASKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~-----~g~~----~~~~a~~~l~~~G~~v 288 (288)
..+ .+ .+|.|+.. +|.. .++.+.+.|+|+|+++
T Consensus 223 ~~l-~~--~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lv 264 (383)
T PRK11705 223 RDL-NG--QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFL 264 (383)
T ss_pred hhc-CC--CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEE
Confidence 122 22 49988753 3432 2377788999999874
No 189
>PRK06196 oxidoreductase; Provisional
Probab=97.09 E-value=0.0045 Score=54.84 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=50.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHH-HHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~-i~~~~~~~g~~ 262 (288)
.+++++|+|++|++|...+..+...|++|+++.+ ++++.+.+ .++..-.++ |-.+ ..++. +.+.....+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R----~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR----RPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999988889999999884 45544332 233211222 2211 11222 22222222359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|++.|.
T Consensus 101 D~li~nAg~ 109 (315)
T PRK06196 101 DILINNAGV 109 (315)
T ss_pred CEEEECCCC
Confidence 999999884
No 190
>PRK06194 hypothetical protein; Provisional
Probab=97.09 E-value=0.0038 Score=54.29 Aligned_cols=80 Identities=23% Similarity=0.270 Sum_probs=49.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EEeCCcccHHHHHH----HhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVKG----LLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~~~~~~~~~~i~~----~~~~ 258 (288)
.++++||+|++|++|...++.+...|++|+++.+ +.++.+. +...+... ++..+-.+.+.+.+ ....
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADV----QQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999988889999988874 3333322 22223322 12222112222222 2222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 81 ~g~id~vi~~Ag~ 93 (287)
T PRK06194 81 FGAVHLLFNNAGV 93 (287)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999985
No 191
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.09 E-value=0.0063 Score=56.35 Aligned_cols=144 Identities=17% Similarity=0.168 Sum_probs=88.1
Q ss_pred cccccceEEEEEEecCCCCCCCCCCEE-EecCCC---------------CcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007 107 AVGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPS---------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170 (288)
Q Consensus 107 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V-~~~~~~---------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~ 170 (288)
..-|+|+++.+.+++++++..-.|..- .+.... .+.|+.. +++|+.+....+ ...
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~ 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGA 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCC
Confidence 456999999999999988775556532 221110 1222222 333444333222 222
Q ss_pred cchHHHHHHHHhhcC---CCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCC
Q 023007 171 VNPLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKE-KLKGLGADEVFTES 245 (288)
Q Consensus 171 ~~~~ta~~~l~~~~~---~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~ 245 (288)
.+...++.++..... ..++++|+|+|+ |.+|.++++.++..|+ +++++. .+.++.+ +++.+|.+ +++.
T Consensus 161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~----r~~~ra~~la~~~g~~-~~~~- 233 (423)
T PRK00045 161 GAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVAN----RTLERAEELAEEFGGE-AIPL- 233 (423)
T ss_pred CCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEe----CCHHHHHHHHHHcCCc-EeeH-
Confidence 245566666643222 257899999999 9999999999999998 566665 4666644 66777753 3322
Q ss_pred cccHHHHHHHhcCCCCccEEEECCCccc
Q 023007 246 QLEVKNVKGLLANLPEPALGFNCVGGNS 273 (288)
Q Consensus 246 ~~~~~~i~~~~~~~g~~D~v~d~~g~~~ 273 (288)
+...+... ++|+||+|+|.+.
T Consensus 234 ----~~~~~~l~---~aDvVI~aT~s~~ 254 (423)
T PRK00045 234 ----DELPEALA---EADIVISSTGAPH 254 (423)
T ss_pred ----HHHHHHhc---cCCEEEECCCCCC
Confidence 22223222 3999999998754
No 192
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.08 E-value=0.0039 Score=53.25 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=51.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPAL 264 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~ 264 (288)
.+++++|+|++|++|...++.+...|++|+++.+ .+++..+.++..+...+ .|-.+ ..++. +.+.....+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~---~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYN---SAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999988889999988764 23444444444343222 12222 12222 2222222335999
Q ss_pred EEECCCc
Q 023007 265 GFNCVGG 271 (288)
Q Consensus 265 v~d~~g~ 271 (288)
+|+|.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999875
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0032 Score=53.39 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCcc-cHHHHHH-HhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQL-EVKNVKG-LLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~~-~~~~i~~-~~~~ 258 (288)
++++++|+|++|++|...+..+...|++++++.+ ++++.+. ++..+... ++ |-.+. .++.+.+ ....
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDG----LAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998873 4443332 23334321 22 22221 1222222 1122
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|+|.|.
T Consensus 82 ~~~id~vi~~ag~ 94 (250)
T PRK12939 82 LGGLDGLVNNAGI 94 (250)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999985
No 194
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.002 Score=57.12 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=30.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.|++++|+|+++++|...++.+...|++|+++++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R 46 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR 46 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999999999999888889999999985
No 195
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.06 E-value=0.0078 Score=49.45 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCCEEEeCCcccHHHHHHHhcCCCC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
-++.+++|+|++|.+|..++..+...|++++++.+ +.++.+.+ +.+ +.. +........+.+.+...+
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R----~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~--- 97 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR----DLERAQKAADSLRARFGEG-VGAVETSDDAARAAAIKG--- 97 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhhcCCc-EEEeeCCCHHHHHHHHhc---
Confidence 35689999999999999988888888999988874 55555433 222 222 111111122344444433
Q ss_pred ccEEEECCCccc
Q 023007 262 PALGFNCVGGNS 273 (288)
Q Consensus 262 ~D~v~d~~g~~~ 273 (288)
.|+||.++....
T Consensus 98 ~diVi~at~~g~ 109 (194)
T cd01078 98 ADVVFAAGAAGV 109 (194)
T ss_pred CCEEEECCCCCc
Confidence 899999987655
No 196
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0043 Score=53.31 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhC-CCCEE--E--eCCc-ccHHH-HHHHh
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGL-GADEV--F--TESQ-LEVKN-VKGLL 256 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~-g~~~v--~--~~~~-~~~~~-i~~~~ 256 (288)
.|++++|+|+++++|...++.+...|++|+++.+ ++++.+. +++. +...+ + |-.+ ..++. +.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGR----DEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999884 4443332 2222 11122 1 2222 12222 22222
Q ss_pred cCCCCccEEEECCCc
Q 023007 257 ANLPEPALGFNCVGG 271 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~ 271 (288)
+..+++|++|+|.|.
T Consensus 83 ~~~g~id~li~~Ag~ 97 (265)
T PRK07062 83 ARFGGVDMLVNNAGQ 97 (265)
T ss_pred HhcCCCCEEEECCCC
Confidence 223469999999984
No 197
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.05 E-value=0.0047 Score=52.42 Aligned_cols=82 Identities=20% Similarity=0.241 Sum_probs=51.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~g~~ 262 (288)
.|++++|+|++|++|...++.+...|++|+.+.+.. .++..+.+++++... ++..+ + ..+.. +.+.....+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998888999999987431 122234445555331 22111 1 11222 22222222359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|+|.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999875
No 198
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.05 E-value=0.0043 Score=53.88 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=50.8
Q ss_pred CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCcc-cHHH-HHHHhcCCC
Q 023007 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~~-~~~~-i~~~~~~~g 260 (288)
.|++++|+|++ +++|.+.++.+...|++|+++.++. ..+++.+.+ ++++....+ |-.+. .++. +.+.....|
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-ALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999996 7999999988888999999887421 112333333 445543222 22221 2222 222223334
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 83 ~iDilVnnAG~ 93 (274)
T PRK08415 83 KIDFIVHSVAF 93 (274)
T ss_pred CCCEEEECCcc
Confidence 69999999984
No 199
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.03 E-value=0.0052 Score=51.78 Aligned_cols=80 Identities=16% Similarity=0.093 Sum_probs=50.6
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccEE
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPALG 265 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~v 265 (288)
+++++|+|+++++|...++.+...|++|+++.+. .++..+.++..+...+ .|-.+ ..++. +.......+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT---HYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 4689999999999999999888899999998853 2223344455553222 12111 12222 22222223359999
Q ss_pred EECCCc
Q 023007 266 FNCVGG 271 (288)
Q Consensus 266 ~d~~g~ 271 (288)
|+|.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 200
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0042 Score=53.18 Aligned_cols=83 Identities=16% Similarity=0.093 Sum_probs=51.3
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC--EEE--eCCcc-cHHHH-HHHhcC
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD--EVF--TESQL-EVKNV-KGLLAN 258 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~--~v~--~~~~~-~~~~i-~~~~~~ 258 (288)
.-+++++||+|++|.+|...++.+...|++|+++.+ +++..+.+. .+.-. .++ |-.+. .++.+ .+..+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV----SEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 357789999999999999999999999999988884 444443332 22211 122 22211 11221 111122
Q ss_pred CCCccEEEECCCcc
Q 023007 259 LPEPALGFNCVGGN 272 (288)
Q Consensus 259 ~g~~D~v~d~~g~~ 272 (288)
.+++|+||.+.|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 23599999998854
No 201
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.02 E-value=0.0029 Score=54.25 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=47.7
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCC--c-ccHHH-HHHHhcCCCCc
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTES--Q-LEVKN-VKGLLANLPEP 262 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~--~-~~~~~-i~~~~~~~g~~ 262 (288)
+++|+|+++++|...++.+...|++|+.+.+ ++++.+.+ ++.+..+.+..+ + ..++. +.+.....+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSR----NEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999888888999998874 44443322 223322222222 1 12222 22222223459
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|++.|.
T Consensus 78 d~li~naG~ 86 (259)
T PRK08340 78 DALVWNAGN 86 (259)
T ss_pred CEEEECCCC
Confidence 999999884
No 202
>PRK08589 short chain dehydrogenase; Validated
Probab=97.01 E-value=0.0042 Score=53.75 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=49.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-E--EeCCc-ccHHH-HHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-V--FTESQ-LEVKN-VKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v--~~~~~-~~~~~-i~~~~~~~g~~ 262 (288)
++++++|+|+++++|.+.++.+...|++|+++.+. ...++..+.+++.+... . .|-.+ ..++. +.......|++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999998888889999999842 11111122233334221 1 22211 12222 22222223359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|+|.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 203
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0043 Score=53.81 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=51.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-E-EE--eCCcc-cHHH-HHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-E-VF--TESQL-EVKN-VKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~-v~--~~~~~-~~~~-i~~~~~~~g~ 261 (288)
.+++++|+|++|++|...++.+...|++|+++. .++++.+.+.+.... . .+ |-.+. .+.. +.......++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~----r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTV----RSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEe----CCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999888999999998 455555544433221 1 11 22221 1111 2222222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 79 ~d~vv~~ag~ 88 (277)
T PRK06180 79 IDVLVNNAGY 88 (277)
T ss_pred CCEEEECCCc
Confidence 9999999886
No 204
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0049 Score=53.21 Aligned_cols=79 Identities=13% Similarity=0.031 Sum_probs=50.5
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCcc-cHHH-HHHHhcCCCCcc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLPEPA 263 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~~-~~~~-i~~~~~~~g~~D 263 (288)
+++++|+|++|++|...++.+...|++|+++. .++++.+.+ +.++...++ |-.+. .++. +.......+++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGD----LDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999988888899998887 455555433 344411222 22221 2222 222222223599
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
++|+|.|.
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99999884
No 205
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0051 Score=52.88 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EEE--eCCcc-cHHHH-HHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVF--TESQL-EVKNV-KGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~-~~~~i-~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+++.+ ++++.+.+ +..+.. .++ |..+. .++.+ .+....
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR----TESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999998889999999884 44443322 222322 222 22221 22222 222122
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999874
No 206
>PRK08264 short chain dehydrogenase; Validated
Probab=96.99 E-value=0.0063 Score=51.26 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=49.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG 265 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v 265 (288)
.+++++|+|++|.+|...++.+...|+ +|+.+.+ ++++.+. .+.. .++..+-.+.+.+.++....+.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r----~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR----DPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEec----Chhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 467999999999999999999999999 8888874 4443322 2222 12222212223344333333359999
Q ss_pred EECCCc
Q 023007 266 FNCVGG 271 (288)
Q Consensus 266 ~d~~g~ 271 (288)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999986
No 207
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0048 Score=51.69 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=48.7
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE--eCCc-ccHHHHHHHhcCCCCccEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQ-LEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~--~~~~-~~~~~i~~~~~~~g~~D~v~ 266 (288)
++++|+|++|++|...++.+...|++|+++.+. +++.+.+++++...++ |-.+ ..++.+.+...+. ++|++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRG----PQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQ-RFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCC----CcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcC-CCCEEE
Confidence 579999999999999888888889999999854 3333334433322222 2212 1233333333322 499999
Q ss_pred ECCCc
Q 023007 267 NCVGG 271 (288)
Q Consensus 267 d~~g~ 271 (288)
.+.|.
T Consensus 77 ~~ag~ 81 (225)
T PRK08177 77 VNAGI 81 (225)
T ss_pred EcCcc
Confidence 99864
No 208
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0044 Score=53.12 Aligned_cols=79 Identities=15% Similarity=0.245 Sum_probs=48.7
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCcc-cHHH-HHHHhcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~~ 259 (288)
+++++|+|++|++|...++.+...|++|+++.+ ++++.+ .++..+.... + |-.+. .++. +.+.....
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAAR----NETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999988899999999984 433332 2333443221 1 11111 1111 22222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 77 ~~id~vi~~ag~ 88 (263)
T PRK06181 77 GGIDILVNNAGI 88 (263)
T ss_pred CCCCEEEECCCc
Confidence 359999999875
No 209
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0059 Score=52.03 Aligned_cols=80 Identities=20% Similarity=0.246 Sum_probs=49.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EEeCCccc---HHH-HHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQLE---VKN-VKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~---~~~-i~~~~~~~g~ 261 (288)
++++++|+|++|++|...++.+...|++|+.+.+ +++..+...++.... .+..+-.+ ++. +.+..+..++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDR----SEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999888889999998884 444333333332211 22211111 222 1122222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 90 ~d~vi~~ag~ 99 (255)
T PRK06841 90 IDILVNSAGV 99 (255)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 210
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.97 E-value=0.0077 Score=53.51 Aligned_cols=97 Identities=16% Similarity=0.163 Sum_probs=64.9
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHH
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGL 255 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~ 255 (288)
+...++++++||..|+ | .|..++.+++..+. +|+++. .+++..+.+ ++.|.+.+.....+..+...
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVD----is~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~-- 145 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVRRLGIENVIFVCGDGYYGVP-- 145 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCcEEEEeCChhhccc--
Confidence 3456889999999999 5 59999999998764 577765 466655444 45676544322222111111
Q ss_pred hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
..+.+|+|+.+.+.... ...++.|+++|+++
T Consensus 146 --~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lv 177 (322)
T PRK13943 146 --EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVI 177 (322)
T ss_pred --ccCCccEEEECCchHHhHHHHHHhcCCCCEEE
Confidence 11249999998886555 77889999999874
No 211
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0053 Score=52.36 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=49.0
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEEeCC--c-ccHHHHH-HHhcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTES--Q-LEVKNVK-GLLANL 259 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~~~~--~-~~~~~i~-~~~~~~ 259 (288)
|++++|+|++|++|...++.+...|++|+++.+ ++++.+. +++.+.. .++..+ + ..++.+. +.....
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR----TKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999988874 3443332 2223322 222222 1 1222222 222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|++.|.
T Consensus 77 ~~id~lI~~ag~ 88 (252)
T PRK07677 77 GRIDALINNAAG 88 (252)
T ss_pred CCccEEEECCCC
Confidence 359999999874
No 212
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.95 E-value=0.011 Score=55.05 Aligned_cols=82 Identities=15% Similarity=0.186 Sum_probs=52.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCEE-EeCCcc-cHHHHHHHh-cCCCCcc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV-FTESQL-EVKNVKGLL-ANLPEPA 263 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~~~i~~~~-~~~g~~D 263 (288)
++++++|+|++|++|...++.+...|++|+++... ...+.. +..++++...+ .|-.+. .++.+.+.. ...+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP--AAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC--ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 57899999999999999999999999999988642 123333 33345664332 233222 223332222 2223599
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
++|+|.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999984
No 213
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.95 E-value=0.0075 Score=51.51 Aligned_cols=82 Identities=18% Similarity=0.187 Sum_probs=50.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCC--c-ccHHH-HHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTES--Q-LEVKN-VKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~~g~~ 262 (288)
.|++++|+|++|++|.+.++.+...|++|+.+... ..++..+.+++.+.... +..+ + ..++. +.+.....+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV--EPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc--chHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999877532 22333444455553211 1111 1 12222 22222223359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|+|.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999985
No 214
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0044 Score=52.88 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=49.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EE--EeCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EV--FTESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v--~~~~~-~~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+++.+ ++++.+.+ +..+.. .. .|-.+ ..++. +......
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR----TAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999988899999998884 44443322 222322 11 22211 11221 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 80 ~g~~d~vi~~ag~ 92 (258)
T PRK07890 80 FGRVDALVNNAFR 92 (258)
T ss_pred cCCccEEEECCcc
Confidence 3359999999874
No 215
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.94 E-value=0.0062 Score=52.82 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=50.9
Q ss_pred CCCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcc---cHHH-HHHHhcCC
Q 023007 187 NSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQL---EVKN-VKGLLANL 259 (288)
Q Consensus 187 ~~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~---~~~~-i~~~~~~~ 259 (288)
-.+++++|+|++ +++|.+.++.+...|++|+++.+.. ...++.+.+ ++++....+.-+-. .++. +.+.....
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 356899999996 7999999988888999998876321 112333333 34553222222211 2222 22222333
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
|++|++|++.|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 469999999874
No 216
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0078 Score=51.55 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=50.2
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCC-CHHHHHHHHhCCCC--EEE--eCCc-ccHHH-HHHHhc
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAG-SDEAKEKLKGLGAD--EVF--TESQ-LEVKN-VKGLLA 257 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~-~~~~~~~~~~~g~~--~v~--~~~~-~~~~~-i~~~~~ 257 (288)
+..+++|+|+|++|++|...++-+... |++|+++.++... .++..+.++..+.. +++ |-.+ ..++. +.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 556789999999999999988876666 5899999864221 11122334444431 222 2212 12222 223222
Q ss_pred CCCCccEEEECCCc
Q 023007 258 NLPEPALGFNCVGG 271 (288)
Q Consensus 258 ~~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 85 -~g~id~li~~ag~ 97 (253)
T PRK07904 85 -GGDVDVAIVAFGL 97 (253)
T ss_pred -cCCCCEEEEeeec
Confidence 2359999998875
No 217
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.93 E-value=0.0078 Score=50.75 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=55.9
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~ 271 (288)
|+|+|++|.+|...++.+...+.+|.+.++.. +.+..+.++..|+..+ .-+-.+.+.+.+...| +|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g---~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAEVV-EADYDDPESLVAALKG---VDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTT---CSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccceEe-ecccCCHHHHHHHHcC---CceEEeecCc
Confidence 78999999999999999999999999999752 3455667788888644 3333344566666664 9999999983
No 218
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.93 E-value=0.005 Score=52.57 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~ 258 (288)
.+++++|+|++|++|...++.+...|++|+++.+ ++++.+ .+++.|... .+ |-.+ ..++. +......
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGR----DPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999988888999998874 444433 223333221 12 2211 11222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 85 ~~~~d~li~~ag~ 97 (255)
T PRK07523 85 IGPIDILVNNAGM 97 (255)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999985
No 219
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.92 E-value=0.0028 Score=55.00 Aligned_cols=98 Identities=22% Similarity=0.247 Sum_probs=60.0
Q ss_pred HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EE-EeCCcccHH
Q 023007 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EV-FTESQLEVK 250 (288)
Q Consensus 177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v-~~~~~~~~~ 250 (288)
+..+.+.+++++|++||-+|+ | -|..++.+++..|++|++++ .+++..++++ +.|.. .+ +...+
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGc-G-wG~~~~~~a~~~g~~v~git----lS~~Q~~~a~~~~~~~gl~~~v~v~~~D---- 120 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGC-G-WGGLAIYAAERYGCHVTGIT----LSEEQAEYARERIREAGLEDRVEVRLQD---- 120 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEE----S-HHHHHHHHHHHHCSTSSSTEEEEES-----
T ss_pred HHHHHHHhCCCCCCEEEEeCC-C-ccHHHHHHHHHcCcEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEEee----
Confidence 344556688999999999998 4 78889999999999999999 6888887764 56642 11 11111
Q ss_pred HHHHHhcCCCCccEEEEC-----CCccc----HHHHHhhccCCCeeC
Q 023007 251 NVKGLLANLPEPALGFNC-----VGGNS----ASKVLKFLRFREEQW 288 (288)
Q Consensus 251 ~i~~~~~~~g~~D~v~d~-----~g~~~----~~~a~~~l~~~G~~v 288 (288)
.+++.. ++|.|+.. +|.+. ++.+-+.|+|+|+++
T Consensus 121 -~~~~~~---~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~ 163 (273)
T PF02353_consen 121 -YRDLPG---KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLV 163 (273)
T ss_dssp -GGG------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEE
T ss_pred -ccccCC---CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEE
Confidence 112222 48987764 55322 377889999999974
No 220
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0052 Score=52.91 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=49.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCcc-cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQL-EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+.+.+ ++++.+ .+.+.+... ++ |-.+. .++. +.+....
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASR----SQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999988899999999884 333332 222333221 22 22221 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 84 ~~~iD~vi~~ag~ 96 (264)
T PRK07576 84 FGPIDVLVSGAAG 96 (264)
T ss_pred cCCCCEEEECCCC
Confidence 2359999998863
No 221
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.92 E-value=0.0059 Score=52.51 Aligned_cols=83 Identities=12% Similarity=0.133 Sum_probs=49.3
Q ss_pred CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHH-HHHHhcCCC
Q 023007 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~-i~~~~~~~g 260 (288)
.|++++|+|+++ ++|.+.++.+...|++|+...+.. ..++..+.+ +++|....+ |-.+ ..++. +.......|
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 568999999986 899998888888899998876321 112223333 334533322 2222 12222 222223334
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|+++++.|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 69999999874
No 222
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0077 Score=51.01 Aligned_cols=80 Identities=18% Similarity=0.135 Sum_probs=51.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEE-E--eCCc-ccHHHHHH-HhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-F--TESQ-LEVKNVKG-LLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~~g~ 261 (288)
++++++|+|++|++|...++.+...|++++.+.+ ++++.+ ..++++.... + |-.+ .....+.+ ..+..++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGR----DPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999988873 444443 3345554322 2 2111 11222222 2222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 81 id~vi~~ag~ 90 (249)
T PRK06500 81 LDAVFINAGV 90 (249)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 223
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0049 Score=53.40 Aligned_cols=79 Identities=20% Similarity=0.198 Sum_probs=49.8
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC---EEE--eCCcc-cHHHHHHHhcC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD---EVF--TESQL-EVKNVKGLLAN 258 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~---~v~--~~~~~-~~~~i~~~~~~ 258 (288)
+++++|+|++|.+|...+..+...|++|+++.+ +++..+. .+..+.+ .++ |..+. .++.+.+....
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMR----NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHh
Confidence 578999999999999999988888999999984 3443322 2223321 122 22221 22223333333
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|+++.|.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 3459999999874
No 224
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0039 Score=53.40 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=30.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|+++++|...++.+...|++|+++.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r 39 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADL 39 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999999999999999899999998874
No 225
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.91 E-value=0.0085 Score=51.85 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=70.6
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcc
Q 023007 173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQL 247 (288)
Q Consensus 173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~ 247 (288)
=..++..+....+++||++||=+|+ +=|.+++.+|+..|++|++++ .+++..++++ +.|.. .+-.
T Consensus 57 Q~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvT----lS~~Q~~~~~~r~~~~gl~~~v~v---- 126 (283)
T COG2230 57 QRAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVT----LSEEQLAYAEKRIAARGLEDNVEV---- 126 (283)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEee----CCHHHHHHHHHHHHHcCCCcccEE----
Confidence 3456666667789999999999998 558889999999999999999 7888887664 46654 1100
Q ss_pred cHHHHHHHhcCCCCccEEEE-----CCCcc----cHHHHHhhccCCCeeC
Q 023007 248 EVKNVKGLLANLPEPALGFN-----CVGGN----SASKVLKFLRFREEQW 288 (288)
Q Consensus 248 ~~~~i~~~~~~~g~~D~v~d-----~~g~~----~~~~a~~~l~~~G~~v 288 (288)
.....+..+. .||-|+. .+|.+ .+..+-++|+++|+++
T Consensus 127 ~l~d~rd~~e---~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~l 173 (283)
T COG2230 127 RLQDYRDFEE---PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRML 173 (283)
T ss_pred Eecccccccc---ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEE
Confidence 0111222222 3776654 45542 2378889999999863
No 226
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.91 E-value=0.0076 Score=51.58 Aligned_cols=83 Identities=17% Similarity=0.190 Sum_probs=50.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-EEeCCccc---HHH-HHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~---~~~-i~~~~~~~g~~ 262 (288)
.++++||+|+++++|...++.+...|++|+++.+. ...++..+.+.+.+... ++..+-.+ ++. +.+.....|++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999998853 11122223334444331 22221111 221 22222223359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|+|.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999874
No 227
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.90 E-value=0.006 Score=52.48 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=49.1
Q ss_pred CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCC--c-ccHHH-HHHHhcCCC
Q 023007 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTES--Q-LEVKN-VKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~--~-~~~~~-i~~~~~~~g 260 (288)
++++++|+|+ ++++|.+.++.+...|++|+.+.+.+ ..++..+.+ ++.+....+.-+ + ..++. +....+..|
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5689999996 57999999988888999998875321 122333333 233432222211 1 12222 222222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 69999999975
No 228
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0082 Score=51.40 Aligned_cols=78 Identities=18% Similarity=0.120 Sum_probs=49.0
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC-CC-EE--EeCCcc-cHHH-HHHHhcC-CCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-AD-EV--FTESQL-EVKN-VKGLLAN-LPE 261 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g-~~-~v--~~~~~~-~~~~-i~~~~~~-~g~ 261 (288)
+++||+|++|++|...++.+...|++|+.+. .+.++.+.+ ..++ .. .+ .|-.+. .++. +...... .++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYD----INEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999998888999999988 355555444 3333 11 11 222221 1222 2222111 235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK08267 78 LDVLFNNAGI 87 (260)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 229
>PRK08643 acetoin reductase; Validated
Probab=96.89 E-value=0.0057 Score=52.20 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=48.8
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCcc-cHHH-HHHHhcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~~ 259 (288)
+++++|+|++|++|...++.+...|++|+++.+ ++++.+ .+++.+.... + |-.+. .++. +.+.....
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY----NEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF 77 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999884 333332 2233333221 2 11111 1222 22222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 78 ~~id~vi~~ag~ 89 (256)
T PRK08643 78 GDLNVVVNNAGV 89 (256)
T ss_pred CCCCEEEECCCC
Confidence 359999999874
No 230
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0056 Score=51.94 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|.+|...++.+...|++|+++.+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r 38 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADI 38 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999999999999988889999999984
No 231
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0059 Score=52.40 Aligned_cols=80 Identities=16% Similarity=0.146 Sum_probs=49.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC--CCC-EEE--eCCc-ccHHHHHHHhcCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GAD-EVF--TESQ-LEVKNVKGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~--g~~-~v~--~~~~-~~~~~i~~~~~~~g 260 (288)
++++++|+|++|++|...+..+...|++|+++.+ ++++.+.+ +++ +.. ..+ |-.+ ..++.+.+.....+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGR----NAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 4679999999999999999988889999999984 55554433 222 211 122 1111 11222222111123
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|++.|.
T Consensus 80 ~id~lv~~ag~ 90 (263)
T PRK09072 80 GINVLINNAGV 90 (263)
T ss_pred CCCEEEECCCC
Confidence 59999999885
No 232
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0064 Score=51.17 Aligned_cols=80 Identities=15% Similarity=0.149 Sum_probs=49.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCC---CEEEeCCcc---cH-HHHHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA---DEVFTESQL---EV-KNVKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~---~~v~~~~~~---~~-~~i~~~~~~~ 259 (288)
.+++++|+|++|.+|...++.+...|++|+++.+ ++++.+ ..+++.. -+.+..+-. .+ +.+.+.....
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITAR----DQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC----CHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999888888999999884 444433 2233321 112211111 11 1222222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|++.|.
T Consensus 81 ~~~d~vi~~ag~ 92 (237)
T PRK07326 81 GGLDVLIANAGV 92 (237)
T ss_pred CCCCEEEECCCC
Confidence 359999999874
No 233
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.88 E-value=0.0029 Score=51.30 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=53.7
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
-.|++|.|+|. |.+|...++.++.+|++|+...+ +....+.....+... . .++.+.. ..|+|+
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~----~~~~~~~~~~~~~~~----~--~l~ell~------~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDR----SPKPEEGADEFGVEY----V--SLDELLA------QADIVS 96 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEES----SCHHHHHHHHTTEEE----S--SHHHHHH------H-SEEE
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecc----cCChhhhccccccee----e--ehhhhcc------hhhhhh
Confidence 46899999999 99999999999999999999984 333333334444311 1 1222222 277777
Q ss_pred ECCCc-----ccH-HHHHhhccCCCeeC
Q 023007 267 NCVGG-----NSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 267 d~~g~-----~~~-~~a~~~l~~~G~~v 288 (288)
.++.. ..+ ...++.|+++..||
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lv 124 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLV 124 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEE
T ss_pred hhhccccccceeeeeeeeeccccceEEE
Confidence 77652 223 66677777776553
No 234
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0081 Score=52.47 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=30.9
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
-++++++|+|+++++|.+.++.+...|++|+++..
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~ 38 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 38 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence 46789999999999999999888889999988764
No 235
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0045 Score=52.31 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=31.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
++++++|+|++|++|...++.+...|++|+++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 46899999999999999998888899999999853
No 236
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0042 Score=54.74 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.|++++|+|++|++|...++.+...|++|+++.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r 48 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR 48 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence 5689999999999999999888888999998884
No 237
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.87 E-value=0.0067 Score=51.72 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=49.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~ 258 (288)
.++++||+|++|++|...++.+...|++++.+.+ ++++.+ .++..+... .+..+-. .++. +......
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDI----TAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999988889999998874 444332 223333221 2212111 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|+++++.|.
T Consensus 84 ~~~id~vi~~ag~ 96 (254)
T PRK08085 84 IGPIDVLINNAGI 96 (254)
T ss_pred cCCCCEEEECCCc
Confidence 3359999999984
No 238
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.87 E-value=0.0062 Score=52.10 Aligned_cols=80 Identities=16% Similarity=0.182 Sum_probs=49.1
Q ss_pred CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EE--eCCc-ccHHHH-HHHhcCC
Q 023007 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VF--TESQ-LEVKNV-KGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~--~~~~-~~~~~i-~~~~~~~ 259 (288)
.|++++|+|++ +++|.+.++.+...|++|+++.+ +++..+.++++.... .+ |-.+ ..++.+ .......
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ----NDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC----chHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999998 79999988888889999998874 333333344432211 12 1111 122222 2222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
|++|++|++.|.
T Consensus 82 g~iD~lv~nAg~ 93 (252)
T PRK06079 82 GKIDGIVHAIAY 93 (252)
T ss_pred CCCCEEEEcccc
Confidence 469999999874
No 239
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0072 Score=51.07 Aligned_cols=81 Identities=22% Similarity=0.260 Sum_probs=50.4
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EEeCCcccHHH----HHHHhc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQLEVKN----VKGLLA 257 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~----i~~~~~ 257 (288)
..+++++|+|++|++|..++..+...|++|+++.+ ++++.+.+ ++.+... ++..+-.+.+. +.....
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVAR----SQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE 79 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999884 44443322 2333221 22111111122 222222
Q ss_pred CCCCccEEEECCCc
Q 023007 258 NLPEPALGFNCVGG 271 (288)
Q Consensus 258 ~~g~~D~v~d~~g~ 271 (288)
..+++|++|+|.|.
T Consensus 80 ~~~~id~lv~~ag~ 93 (241)
T PRK07454 80 QFGCPDVLINNAGM 93 (241)
T ss_pred HcCCCCEEEECCCc
Confidence 23359999999984
No 240
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0048 Score=52.40 Aligned_cols=80 Identities=20% Similarity=0.162 Sum_probs=48.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhC--CCC-EEEeCCccc---HHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGL--GAD-EVFTESQLE---VKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~--g~~-~v~~~~~~~---~~~-i~~~~~~~ 259 (288)
++++++|+|++|.+|...++.+...|++|+.+.+ +.++.+ ....+ +.. .++..+-.+ ++. +....+..
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADR----DAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecC----CHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999998888888999999984 333332 22222 322 122211111 222 12222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|.|.|.
T Consensus 80 ~~id~vi~~ag~ 91 (252)
T PRK06138 80 GRLDVLVNNAGF 91 (252)
T ss_pred CCCCEEEECCCC
Confidence 359999999984
No 241
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0058 Score=51.52 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~ 258 (288)
+|++++|+|+++++|.+.+.-+...|++|+.+.+ ++++.+ .+++.+.+. .+ |-.+ ..++. +.+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r----~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQ----DQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999988888889999998874 444433 233445332 12 2111 12222 2222222
Q ss_pred CC-CccEEEECCC
Q 023007 259 LP-EPALGFNCVG 270 (288)
Q Consensus 259 ~g-~~D~v~d~~g 270 (288)
.| ++|++|++.|
T Consensus 80 ~g~~iD~li~nag 92 (227)
T PRK08862 80 FNRAPDVLVNNWT 92 (227)
T ss_pred hCCCCCEEEECCc
Confidence 23 5999999986
No 242
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.008 Score=51.36 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=49.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH---HHHhCCCCE-EEeCCcc---cHHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE---KLKGLGADE-VFTESQL---EVKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~~ 259 (288)
+|++++|+|++|++|...++.+...|++++++.+. +++.+ .+++.+... .+..+-. .++. +.+.....
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS----APDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC----hhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999888888889999988753 33322 233344321 2211111 1211 22222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 82 ~~id~vi~~ag~ 93 (258)
T PRK08628 82 GRIDGLVNNAGV 93 (258)
T ss_pred CCCCEEEECCcc
Confidence 359999999983
No 243
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.85 E-value=0.007 Score=52.40 Aligned_cols=80 Identities=18% Similarity=0.302 Sum_probs=49.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEEeCC--c-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVFTES--Q-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~~~~--~-~~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+++.+ ++++.+ .+++.+.. ..+..+ + ..++. +.+....
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDR----NQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999899999998874 333332 22233332 112211 1 11222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|+|.|.
T Consensus 85 ~g~id~li~~ag~ 97 (278)
T PRK08277 85 FGPCDILINGAGG 97 (278)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999883
No 244
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0047 Score=53.19 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=48.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPAL 264 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~ 264 (288)
.+++++|+|++|++|...++.+...|++|+++.+ ++++.+.. .+...+ .|-.+ ..++. +.......|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSR----NPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----Chhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 3578999999999999998888888999999884 33333221 122211 22222 11222 2222222345999
Q ss_pred EEECCCc
Q 023007 265 GFNCVGG 271 (288)
Q Consensus 265 v~d~~g~ 271 (288)
+|+|.|.
T Consensus 77 li~~ag~ 83 (270)
T PRK06179 77 LVNNAGV 83 (270)
T ss_pred EEECCCC
Confidence 9999985
No 245
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.84 E-value=0.012 Score=52.78 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=50.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
+|++|||+|++|.+|...++.+...|.+|+++.+...........+. .+.. ..+..+-.+.+.+.++..+.+ +|+||
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~vi 80 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFK-PEIVF 80 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcC-CCEEE
Confidence 46899999999999999999999999999988754322211111111 1111 112111122344555444433 89999
Q ss_pred ECCCc
Q 023007 267 NCVGG 271 (288)
Q Consensus 267 d~~g~ 271 (288)
++.+.
T Consensus 81 h~A~~ 85 (349)
T TIGR02622 81 HLAAQ 85 (349)
T ss_pred ECCcc
Confidence 99974
No 246
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.011 Score=50.43 Aligned_cols=84 Identities=20% Similarity=0.196 Sum_probs=50.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~g~ 261 (288)
++++++|+|+++++|...++.+...|++|+++.+..... ++..+.++..+... .+..+ + ..++. +.+.....++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999887532100 11122333444322 22111 1 11222 2222222345
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 247
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0067 Score=52.40 Aligned_cols=78 Identities=17% Similarity=0.136 Sum_probs=48.3
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE----EeCCcc-cHHH-HHHHhcCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV----FTESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v----~~~~~~-~~~~-i~~~~~~~ 259 (288)
++++|+|++|++|...++.+...|++|+++.+ ++++.+ .++..+...+ .|-.+. .++. +.+.....
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR----DADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence 37999999999999999988889999988874 444332 2233343211 232221 2222 22222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 77 ~~id~lv~~ag~ 88 (272)
T PRK07832 77 GSMDVVMNIAGI 88 (272)
T ss_pred CCCCEEEECCCC
Confidence 359999999984
No 248
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.83 E-value=0.007 Score=51.79 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EEEeCCcccHHHH----HHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKNV----KGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~i----~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+.+.+ +.++.+.+ +..+.. .++..+-.+.+.+ .+....
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR----KAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999998889999998884 44444332 233322 1222121112222 222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.|.|.
T Consensus 87 ~~~id~vi~~ag~ 99 (259)
T PRK08213 87 FGHVDILVNNAGA 99 (259)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999874
No 249
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.83 E-value=0.0059 Score=51.77 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=49.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC--CC-EEEeCCcc---cHHHH-HHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVFTESQL---EVKNV-KGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g--~~-~v~~~~~~---~~~~i-~~~~~~~ 259 (288)
++++++|+|++|.+|...++.+...|++|+++.+ ++++.+.+ ..+. .. .++..+-. .++.+ .+..+..
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR----NEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4579999999999999999888888999999984 44444332 2222 21 12211111 12222 2221222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|.+.|.
T Consensus 80 ~~~d~vi~~ag~ 91 (251)
T PRK07231 80 GSVDILVNNAGT 91 (251)
T ss_pred CCCCEEEECCCC
Confidence 359999999975
No 250
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0091 Score=51.28 Aligned_cols=80 Identities=11% Similarity=0.179 Sum_probs=51.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCE-EE--eCCcc-cHHH-HHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~~g~ 261 (288)
.+++++|+|+++++|...++.+...|++|+++.+ ++++.+ ..++++... ++ |-.+. .++. +.......++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDI----DADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999899999999874 444443 334454321 22 22111 1222 2222222335
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|++.|.
T Consensus 81 id~lv~~ag~ 90 (261)
T PRK08265 81 VDILVNLACT 90 (261)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 251
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0075 Score=51.33 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=49.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEEeCC--c-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTES--Q-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~~~~--~-~~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++|+.+.+ +.++.+. +.+.+.. ..+..+ + ..++. +.+....
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR----KLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999884 4443332 2233332 222211 1 11222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|+++++.|.
T Consensus 83 ~~~id~li~~ag~ 95 (252)
T PRK07035 83 HGRLDILVNNAAA 95 (252)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999874
No 252
>PLN02253 xanthoxin dehydrogenase
Probab=96.81 E-value=0.0066 Score=52.64 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=48.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCC--C-EEE--eCCcc-cHHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--D-EVF--TESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~--~-~v~--~~~~~-~~~~-i~~~~~~~ 259 (288)
.+++++|+|++|++|.+.++.+...|++|+++.+ +++..+ ...+++. . ..+ |-.+. .++. +.......
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL----QDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 4689999999999999998888888999998873 333332 2333332 1 111 22211 1211 22222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 93 g~id~li~~Ag~ 104 (280)
T PLN02253 93 GTLDIMVNNAGL 104 (280)
T ss_pred CCCCEEEECCCc
Confidence 359999999874
No 253
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.80 E-value=0.0078 Score=50.77 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=49.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCCccc---HHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLE---VKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~~~~---~~~-i~~~~~~ 258 (288)
.+++++|+|++|++|...+..+...|++|+++.+ ++++.+ .++..+.... +..+-.. ++. +.+....
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLAR----TEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999888889999999885 333332 2233332221 2222111 222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.+.|.
T Consensus 82 ~~~id~vi~~ag~ 94 (239)
T PRK07666 82 LGSIDILINNAGI 94 (239)
T ss_pred cCCccEEEEcCcc
Confidence 3359999999875
No 254
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.01 Score=52.38 Aligned_cols=35 Identities=23% Similarity=0.147 Sum_probs=31.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
.|++++|+|+++++|.+.++.+...|++|+++.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999999999999998754
No 255
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.80 E-value=0.0068 Score=53.95 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=51.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----Hh-CCCCE----EEeCCc---ccHHHHHHH
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGADE----VFTESQ---LEVKNVKGL 255 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~g~~~----v~~~~~---~~~~~i~~~ 255 (288)
.|++++|+|+++++|.+.++.+...|++|+.+.+ ++++.+.+ ++ .+... ..|-.+ ...+.+.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R----~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR----NPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC----CHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence 5899999999999999988888788999999984 55555433 22 22111 123222 123445544
Q ss_pred hcCCCCccEEEECCCc
Q 023007 256 LANLPEPALGFNCVGG 271 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~ 271 (288)
.++.. +|++|++.|.
T Consensus 128 ~~~~d-idilVnnAG~ 142 (320)
T PLN02780 128 IEGLD-VGVLINNVGV 142 (320)
T ss_pred hcCCC-ccEEEEecCc
Confidence 44422 7799999874
No 256
>PRK05717 oxidoreductase; Validated
Probab=96.79 E-value=0.012 Score=50.14 Aligned_cols=80 Identities=16% Similarity=0.119 Sum_probs=50.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCE-EE--eCCc-ccHH-HHHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VF--TESQ-LEVK-NVKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~-v~--~~~~-~~~~-~i~~~~~~~g~ 261 (288)
.|++++|+|++|.+|...+..+...|++|+++.. ++++.+ ..++++... .+ |-.+ ..++ .+.+..+..|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL----DRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999988888999988863 443333 334454321 11 1111 1121 12333333345
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 85 id~li~~ag~ 94 (255)
T PRK05717 85 LDALVCNAAI 94 (255)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 257
>PRK06720 hypothetical protein; Provisional
Probab=96.79 E-value=0.01 Score=47.69 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=49.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EEeCCcccHHHHH----HHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKNVK----GLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~~~~~~~~~~i~----~~~~~ 258 (288)
+++.++|+|+++++|...+..+...|++|+++.+ +++.. +.+++.+... .+..+-...+.+. +....
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI----DQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999988888888999988874 33333 2223334332 2222211122222 22223
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|++.|.
T Consensus 91 ~G~iDilVnnAG~ 103 (169)
T PRK06720 91 FSRIDMLFQNAGL 103 (169)
T ss_pred cCCCCEEEECCCc
Confidence 3469999999885
No 258
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.77 E-value=0.0025 Score=47.02 Aligned_cols=91 Identities=16% Similarity=0.091 Sum_probs=57.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHH-HcCCeEEEEEcCCCCCHHHHHHHHh-C---CC-CEEEeCCcccHHHHHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDEAKEKLKG-L---GA-DEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~-~~g~~vi~~~~~~~~~~~~~~~~~~-~---g~-~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
||++||-+|+ +.|..++.+++ ..+++++++. .+++..+.+++ . +. +.+--... + +........+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~i~~~~~-d---~~~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVD----ISPEMLEIARERAAEEGLSDRITFVQG-D---AEFDPDFLEP 70 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHHHHHTTTTTTEEEEES-C---CHGGTTTSSC
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHhcCCCCCeEEEEC-c---cccCcccCCC
Confidence 6789999988 45788888888 5788988887 57888877753 2 22 22211111 1 1111111124
Q ss_pred ccEEEECC-Cc----cc------HHHHHhhccCCCeeC
Q 023007 262 PALGFNCV-GG----NS------ASKVLKFLRFREEQW 288 (288)
Q Consensus 262 ~D~v~d~~-g~----~~------~~~a~~~l~~~G~~v 288 (288)
+|+|+... .. +. ++...+.|+|+|+++
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lv 108 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLV 108 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEE
Confidence 99999877 22 12 467889999999985
No 259
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.77 E-value=0.011 Score=54.03 Aligned_cols=88 Identities=16% Similarity=0.303 Sum_probs=52.4
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH---HHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD---EAKEKLKGLGADEVFTESQLEVKNVKGLLANLP 260 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~---~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g 260 (288)
.+...+.+|+|+|++|.+|...++.+...|.+|+++++.....+ ...+......-..++..+-.+.+.+.....+.+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence 44566789999999999999999999889999999986421110 011111122111222222222234444333221
Q ss_pred -CccEEEECCCc
Q 023007 261 -EPALGFNCVGG 271 (288)
Q Consensus 261 -~~D~v~d~~g~ 271 (288)
++|+||+|.+.
T Consensus 135 ~~~D~Vi~~aa~ 146 (390)
T PLN02657 135 DPVDVVVSCLAS 146 (390)
T ss_pred CCCcEEEECCcc
Confidence 39999999874
No 260
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.77 E-value=0.0078 Score=50.98 Aligned_cols=82 Identities=21% Similarity=0.155 Sum_probs=49.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH---HHHHhCCCCEEE---eCCcc-cHHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGADEVF---TESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~g~~~v~---~~~~~-~~~~-i~~~~~~~ 259 (288)
++++++|+|++|++|...++.+...|+++++..+. ..+... +.++..+..... |-.+. .++. +.+.....
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGP--NSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC--ChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 36789999999999999999999999998886532 122222 223334543321 22211 1211 22222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 261
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.76 E-value=0.013 Score=50.62 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=48.8
Q ss_pred CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCC--c-ccHHHH-HHHhcCCC
Q 023007 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTES--Q-LEVKNV-KGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~--~-~~~~~i-~~~~~~~g 260 (288)
+|++++|+|+++ ++|.+.++.+...|++|+.+.+++ ..++..+.+. +.+....+.-+ + ..++.+ .+.....|
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 478999999975 899998888888899998776421 1123333332 23322222211 1 122222 22223334
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 84 ~iD~linnAg~ 94 (262)
T PRK07984 84 KFDGFVHSIGF 94 (262)
T ss_pred CCCEEEECCcc
Confidence 69999999973
No 262
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.76 E-value=0.0077 Score=51.01 Aligned_cols=84 Identities=12% Similarity=0.085 Sum_probs=49.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHH----HHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i----~~~~~~~g~~ 262 (288)
.+++++|+|++|.+|...+..+...|++|+++.++....++..+.+++.+.. .++..+-.+.+.+ .+.....+++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999888888999999985311112222233333322 1222111111222 2222223359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|.|.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999865
No 263
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0061 Score=52.16 Aligned_cols=79 Identities=16% Similarity=0.165 Sum_probs=48.9
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--C-EEE--eCCc-ccHHH-HHHHhcCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVF--TESQ-LEVKN-VKGLLANLP 260 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~-~v~--~~~~-~~~~~-i~~~~~~~g 260 (288)
+++++|+|++|++|...++.+...|++|+++.+ +.++.+.+ +++.. + ..+ |-.+ ..+.. +.+.....+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVAR----RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999998888888999998873 45554433 33321 1 112 2111 11211 222222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
.+|++|++.|.
T Consensus 78 ~id~lv~~ag~ 88 (257)
T PRK07024 78 LPDVVIANAGI 88 (257)
T ss_pred CCCEEEECCCc
Confidence 58999999874
No 264
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.74 E-value=0.011 Score=49.80 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEE---eCCcc-cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF---TESQL-EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~---~~~~~-~~~~-i~~~~~~ 258 (288)
++++++|+|++|.+|...++.+...|.+|+.+.+ ++++. +.+++.+....+ |-.+. .++. +.+....
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDS----NEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----ChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999998889999988885 33332 233334433222 22221 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|.++.+.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (246)
T PRK05653 80 FGALDILVNNAGI 92 (246)
T ss_pred hCCCCEEEECCCc
Confidence 3358999999865
No 265
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.74 E-value=0.0085 Score=52.51 Aligned_cols=140 Identities=11% Similarity=0.121 Sum_probs=75.8
Q ss_pred CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHH--HHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007 126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL--RMLEDFTTLNSGDSIVQNGATSIVGQ 203 (288)
Q Consensus 126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~--~~l~~~~~~~~g~~vlI~g~~g~vG~ 203 (288)
.++.|++.+..+ .|.++...+....+.+.+++.+-.+. ...|.. ..+.. ...++++||-.|+ |. |.
T Consensus 105 p~~~g~~~~i~p----~w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~ 172 (288)
T TIGR00406 105 PVQFGKRFWICP----SWRDVPSDEDALIIMLDPGLAFGTGT----HPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GI 172 (288)
T ss_pred CEEEcCeEEEEC----CCcCCCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hH
Confidence 356778776664 33333222334556666665544321 122222 22222 2457899999999 54 77
Q ss_pred HHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh----CCCCE-EEeCCcccHHHHHHHhcCCCCccEEEECCCccc----
Q 023007 204 CIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG----LGADE-VFTESQLEVKNVKGLLANLPEPALGFNCVGGNS---- 273 (288)
Q Consensus 204 ~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~---- 273 (288)
.++.+++ .|+ +++++. .++...+.+++ .+... +...... ......+ ++|+|+.+.....
T Consensus 173 lai~aa~-~g~~~V~avD----id~~al~~a~~n~~~n~~~~~~~~~~~~----~~~~~~~--~fDlVvan~~~~~l~~l 241 (288)
T TIGR00406 173 LSIAALK-LGAAKVVGID----IDPLAVESARKNAELNQVSDRLQVKLIY----LEQPIEG--KADVIVANILAEVIKEL 241 (288)
T ss_pred HHHHHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCcceEEEecc----cccccCC--CceEEEEecCHHHHHHH
Confidence 7777665 465 676665 46666665542 22221 1111110 1111222 5999987654432
Q ss_pred HHHHHhhccCCCeeC
Q 023007 274 ASKVLKFLRFREEQW 288 (288)
Q Consensus 274 ~~~a~~~l~~~G~~v 288 (288)
+..+.++|+|+|.++
T Consensus 242 l~~~~~~LkpgG~li 256 (288)
T TIGR00406 242 YPQFSRLVKPGGWLI 256 (288)
T ss_pred HHHHHHHcCCCcEEE
Confidence 266789999999874
No 266
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.74 E-value=0.013 Score=53.13 Aligned_cols=87 Identities=17% Similarity=0.117 Sum_probs=59.8
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCC--CCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLG--ADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
.+|+|+|+ |.+|+.+++.+.+.| .+|++.. ++.++.+.+.... --.....+..+.+.+.++.++ .|+||
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAd----Rs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~---~d~VI 73 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIAD----RSKEKCARIAELIGGKVEALQVDAADVDALVALIKD---FDLVI 73 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHhhccccceeEEecccChHHHHHHHhc---CCEEE
Confidence 57999999 999999999988888 7888888 5667766665443 111222223334567777775 79999
Q ss_pred ECCCcccHHHHH-hhccCC
Q 023007 267 NCVGGNSASKVL-KFLRFR 284 (288)
Q Consensus 267 d~~g~~~~~~a~-~~l~~~ 284 (288)
+|.+......++ .|++.+
T Consensus 74 n~~p~~~~~~i~ka~i~~g 92 (389)
T COG1748 74 NAAPPFVDLTILKACIKTG 92 (389)
T ss_pred EeCCchhhHHHHHHHHHhC
Confidence 999987764444 455444
No 267
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0083 Score=51.28 Aligned_cols=80 Identities=24% Similarity=0.266 Sum_probs=49.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHH----HHHhCCCCEE---EeCCcc-cHHHHHHHh-c
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE----KLKGLGADEV---FTESQL-EVKNVKGLL-A 257 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~----~~~~~g~~~v---~~~~~~-~~~~i~~~~-~ 257 (288)
.+++++|+|++|++|...++.+...|++ |+++.+ ++++.. .+++.+.... .|-.+. .++.+.+.. .
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGR----NAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcC----CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999999 777764 333322 3344443321 222221 122222211 1
Q ss_pred CCCCccEEEECCCc
Q 023007 258 NLPEPALGFNCVGG 271 (288)
Q Consensus 258 ~~g~~D~v~d~~g~ 271 (288)
..+++|++|+|.|.
T Consensus 81 ~~g~id~li~~ag~ 94 (260)
T PRK06198 81 AFGRLDALVNAAGL 94 (260)
T ss_pred HhCCCCEEEECCCc
Confidence 22359999999985
No 268
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.72 E-value=0.014 Score=47.44 Aligned_cols=79 Identities=24% Similarity=0.334 Sum_probs=56.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC--CEEEe----CCcccHHH-HHHHhcCCCCc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DEVFT----ESQLEVKN-VKGLLANLPEP 262 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~--~~v~~----~~~~~~~~-i~~~~~~~g~~ 262 (288)
+-.+|+|++.++|.+..+.+...|+++++...+ ++...+.++.++. +|.-. +++.+++. +.+..+.+|.+
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~---~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLD---SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecc---hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 567899999999999999999999999988743 4445556677776 44311 22334444 55555556679
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
++++||.|-
T Consensus 92 svlVncAGI 100 (256)
T KOG1200|consen 92 SVLVNCAGI 100 (256)
T ss_pred cEEEEcCcc
Confidence 999999995
No 269
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.71 E-value=0.0089 Score=50.69 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEEeCCccc---HHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTESQLE---VKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~~~~~~~---~~~-i~~~~~~ 258 (288)
+++++||+|++|.+|...++.+...|++|+.+.+ +.++.+. +++.+.. .++..+-.+ ++. +.+..+.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL----NREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999998874 3443332 2333322 222222112 222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.+.|.
T Consensus 78 ~~~~d~vi~~ag~ 90 (250)
T TIGR03206 78 LGPVDVLVNNAGW 90 (250)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999973
No 270
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.71 E-value=0.017 Score=53.01 Aligned_cols=77 Identities=13% Similarity=0.229 Sum_probs=49.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG 265 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v 265 (288)
+|++++|+|++|++|.+.++.+...|++|+++.+ ++++.+ .....+.. ..+..+-.+.+.+.+..+ ++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r----~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~---~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTS----NSDKITLEINGEDLPVKTLHWQVGQEAALAELLE---KVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC---CCCEE
Confidence 4789999999999999999888888999999874 444432 22221111 122211122334444433 49999
Q ss_pred EECCCc
Q 023007 266 FNCVGG 271 (288)
Q Consensus 266 ~d~~g~ 271 (288)
|++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 999874
No 271
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.70 E-value=0.025 Score=52.24 Aligned_cols=143 Identities=15% Similarity=0.211 Sum_probs=85.6
Q ss_pred cccccceEEEEEEecCCCCCCCCCCEEE-ecCC---------------CCcccceEEEeeCCcEEE---c-CCCCChhhh
Q 023007 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPP---------------SSGTWQSYVVKDQSVWHK---V-SKDSPMEYA 166 (288)
Q Consensus 107 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~-~~~~---------------~~G~~a~~~~~~~~~l~~---i-p~~~~~~~a 166 (288)
..-|.|+++.+.+++++++..-.|+.-+ +.+. ..+.|++++.++. .+.. + +..++...
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~- 165 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISS- 165 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHH-
Confidence 3468888898988888887655555322 1110 0556777776665 2221 2 11222111
Q ss_pred cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHH-HHHHhCCCCEEEeC
Q 023007 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK-EKLKGLGADEVFTE 244 (288)
Q Consensus 167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~ 244 (288)
.|.....+.....++++|+|+|+ |.+|..+++.++..|+ +++++. .+.++. ++++++|... +..
T Consensus 166 --------~Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~----rs~~ra~~la~~~g~~~-i~~ 231 (417)
T TIGR01035 166 --------AAVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIAN----RTYERAEDLAKELGGEA-VKF 231 (417)
T ss_pred --------HHHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHcCCeE-eeH
Confidence 11111222234467899999999 9999999999999994 666666 455554 4666777532 221
Q ss_pred CcccHHHHHHHhcCCCCccEEEECCCccc
Q 023007 245 SQLEVKNVKGLLANLPEPALGFNCVGGNS 273 (288)
Q Consensus 245 ~~~~~~~i~~~~~~~g~~D~v~d~~g~~~ 273 (288)
+.+.+... ++|+||+|++.+.
T Consensus 232 -----~~l~~~l~---~aDvVi~aT~s~~ 252 (417)
T TIGR01035 232 -----EDLEEYLA---EADIVISSTGAPH 252 (417)
T ss_pred -----HHHHHHHh---hCCEEEECCCCCC
Confidence 22333333 3999999998754
No 272
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.70 E-value=0.028 Score=42.85 Aligned_cols=90 Identities=14% Similarity=0.196 Sum_probs=59.8
Q ss_pred EEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHH-----------------
Q 023007 192 IVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKN----------------- 251 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~----------------- 251 (288)
|.|+|+||.+|..+.++.+... ++++..+.. ++-++ .+.+++|.+..+...++...+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~--~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G 78 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAG--SNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSG 78 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEES--STHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEES
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcC--CCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeC
Confidence 6799999999999999999997 788888754 34444 4566889999887766543222
Q ss_pred ---HHHHhcCCCCccEEEECCCccc-HHHHHhhccCC
Q 023007 252 ---VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR 284 (288)
Q Consensus 252 ---i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~ 284 (288)
+.++.... ++|+|++..-+-. +...+..++.+
T Consensus 79 ~~~l~~~~~~~-~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 79 PEGLEELAEEP-EVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp HHHHHHHHTHT-T-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred hHHHHHHhcCC-CCCEEEEeCcccchHHHHHHHHHCC
Confidence 33333322 4999999875544 47777766655
No 273
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.70 E-value=0.011 Score=50.89 Aligned_cols=83 Identities=13% Similarity=0.154 Sum_probs=49.4
Q ss_pred CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHHH-HHHhcCCC
Q 023007 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKNV-KGLLANLP 260 (288)
Q Consensus 188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~i-~~~~~~~g 260 (288)
++++++|+|+ ++++|.+.++.+...|++|+.+.+.. ..+++.+.+ ++++....+ |-.+ ..++.+ .......|
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999996 57999998888888999998864221 223443333 344533222 2111 122222 22222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 69999999874
No 274
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.69 E-value=0.012 Score=50.06 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=49.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~ 258 (288)
++++++|+|++|.+|...++.+...|++|+++.+ ++++.+ .++..+... ++.-+-. .++. +.+....
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADL----NDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4679999999999999999988888999999985 334332 223334321 2222111 1211 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.|+|.
T Consensus 79 ~~~~d~vi~~a~~ 91 (258)
T PRK12429 79 FGGVDILVNNAGI 91 (258)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999874
No 275
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.69 E-value=0.0079 Score=51.03 Aligned_cols=81 Identities=16% Similarity=0.189 Sum_probs=48.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEE-EeCCcccHHH----HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKN----VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v-~~~~~~~~~~----i~~~~~~ 258 (288)
++++++|+|++|++|...+..+...|++|+++.. .+.++. +.++..+.... +..+-.+.+. +.+....
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYA---RSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999877532 233333 22334443322 2111111122 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (250)
T PRK08063 80 FGRLDVFVNNAAS 92 (250)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999874
No 276
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.69 E-value=0.012 Score=51.11 Aligned_cols=83 Identities=23% Similarity=0.285 Sum_probs=53.4
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC---E---EEeCC-cccHHH-HHH
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD---E---VFTES-QLEVKN-VKG 254 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~---~---v~~~~-~~~~~~-i~~ 254 (288)
-.|+.++|+|++.++|.+.+..+...|++|+++.+ ++++.+.. ...+.. . ..|-. +.+.+. +..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGR----SEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 46789999999999999999999999999999984 55554332 233332 1 12221 222222 222
Q ss_pred HhcC-CCCccEEEECCCccc
Q 023007 255 LLAN-LPEPALGFNCVGGNS 273 (288)
Q Consensus 255 ~~~~-~g~~D~v~d~~g~~~ 273 (288)
.... .|++|+.+++.|...
T Consensus 82 ~~~~~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALG 101 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCC
Confidence 2223 347999999988533
No 277
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.69 E-value=0.011 Score=52.14 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=49.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-CHHHHHHHHhCCCCEEEeC-C--c-ccHHHHHHH-hcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKGLGADEVFTE-S--Q-LEVKNVKGL-LANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~~~g~~~v~~~-~--~-~~~~~i~~~-~~~~g~ 261 (288)
+|++++|+|+++++|...++.+...|++|++....... .++..+.++..|....... + + ..++.+.+. .. .|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence 56899999999999999888888889999887632110 1111233344454322221 1 1 112222221 22 346
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 278
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.012 Score=50.15 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|++|...++.+...|++|+.+.+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r 38 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR 38 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4789999999999999999998889999999884
No 279
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.017 Score=49.90 Aligned_cols=78 Identities=21% Similarity=0.208 Sum_probs=49.5
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCC-EE--EeCCcc-cHHH-HHHHhcCCCCcc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EV--FTESQL-EVKN-VKGLLANLPEPA 263 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~-~v--~~~~~~-~~~~-i~~~~~~~g~~D 263 (288)
+++||+|++|.+|...++.+...|++|+++. .++++.+.+++ ++.. .+ .|-.+. .++. +.+..+..+++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATV----RRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5799999999999999988888899999998 45666555433 2322 11 222211 1111 222222223599
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
++|+|.|.
T Consensus 79 ~vi~~ag~ 86 (276)
T PRK06482 79 VVVSNAGY 86 (276)
T ss_pred EEEECCCC
Confidence 99999874
No 280
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.66 E-value=0.0091 Score=49.84 Aligned_cols=95 Identities=19% Similarity=0.149 Sum_probs=60.4
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHH
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVK 253 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~ 253 (288)
....+++|++||-+|+ +.|..+..+++..+ .+|+.+. .+++..+.++ +.|...+ +..+... .
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE----~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~--~-- 139 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIE----RIPELAEKAKKTLKKLGYDNVEVIVGDGTL--G-- 139 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHHcCCCCeEEEECCccc--C--
Confidence 4467899999999988 55777777777765 5788776 4666665553 4554332 2211110 0
Q ss_pred HHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 254 GLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 254 ~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+... +.+|+|+-....+.. ...++.|+++|+++
T Consensus 140 -~~~~-~~fD~I~~~~~~~~~~~~l~~~LkpgG~lv 173 (212)
T PRK13942 140 -YEEN-APYDRIYVTAAGPDIPKPLIEQLKDGGIMV 173 (212)
T ss_pred -CCcC-CCcCEEEECCCcccchHHHHHhhCCCcEEE
Confidence 1112 249998765544444 77889999999975
No 281
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.02 Score=47.64 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=50.1
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.++++|+|++|.+|...+..+... ++|+++.+ +.++.+.+. .+..-+++..+-.+.+.+.++....+++|.+|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR----PAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC----CHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 368999999999999988777766 89999984 444444333 222122333222233455555544334999999
Q ss_pred CCCc
Q 023007 268 CVGG 271 (288)
Q Consensus 268 ~~g~ 271 (288)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9875
No 282
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.017 Score=50.04 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=49.3
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC-EEEeCCcccHHH----HHHHhcCCCCc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQLEVKN----VKGLLANLPEP 262 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~----i~~~~~~~g~~ 262 (288)
+++++|+|++|++|...++.+...|++|+.+.+ ++++.+.+. .++.. ..+..+-.+.+. +....+..+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR----DTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999888888999998884 455544433 33322 122211111112 22222222359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|.|.|.
T Consensus 79 d~vi~~ag~ 87 (275)
T PRK08263 79 DIVVNNAGY 87 (275)
T ss_pred CEEEECCCC
Confidence 999999985
No 283
>PRK09186 flagellin modification protein A; Provisional
Probab=96.64 E-value=0.0081 Score=51.18 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
++++++|+|++|++|...+..+...|++|+.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r 36 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADI 36 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec
Confidence 4789999999999999999999999999999874
No 284
>PRK06398 aldose dehydrogenase; Validated
Probab=96.64 E-value=0.0029 Score=54.35 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+|++++|+|+++++|...+..+...|++|+.+.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r 38 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI 38 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 4689999999999999999999999999998874
No 285
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.64 E-value=0.015 Score=49.88 Aligned_cols=83 Identities=11% Similarity=0.134 Sum_probs=49.8
Q ss_pred CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC-CCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-ADE-VF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g-~~~-v~--~~~~-~~~~~-i~~~~~~ 258 (288)
.|++++|+|++ +++|.+.++.+...|++|+.+.+.. ..+++.+.+ +++. ... .+ |-.+ ..++. +.+....
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-RLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-cchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 47899999997 7999998888888999999876432 233344333 3442 221 11 2111 12222 2222223
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|+|.|.
T Consensus 85 ~g~ld~lv~nag~ 97 (257)
T PRK08594 85 VGVIHGVAHCIAF 97 (257)
T ss_pred CCCccEEEECccc
Confidence 3469999999873
No 286
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.64 E-value=0.014 Score=50.13 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=49.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~ 258 (288)
++++++|+|+++++|...+..+...|++++++.+ ++++.+ .+++.+... .+..+-. .++. +.+....
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDI----NQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5689999999999999988888888999988864 444332 233444332 1221111 1222 1222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|+|.|.
T Consensus 85 ~~~id~li~~ag~ 97 (265)
T PRK07097 85 VGVIDILVNNAGI 97 (265)
T ss_pred CCCCCEEEECCCC
Confidence 2359999999884
No 287
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.64 E-value=0.016 Score=51.37 Aligned_cols=40 Identities=28% Similarity=0.338 Sum_probs=33.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE 231 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~ 231 (288)
++++++|+|++|++|...++.+...|++|+++.+ ++++.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r----~~~~~~ 44 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR----NLKKAE 44 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHH
Confidence 4689999999999999999888888999999884 455443
No 288
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.64 E-value=0.013 Score=50.12 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=50.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCcc-cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQL-EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~ 258 (288)
.+++++|+|+++++|...+..+...|++++++.+ ++++.+. ++..+.+. ++ |-.+. .++. +......
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI----NADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999988889999998874 4444332 23334332 22 22221 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|+|.|.
T Consensus 86 ~~~~d~li~~ag~ 98 (255)
T PRK06113 86 LGKVDILVNNAGG 98 (255)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999874
No 289
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.0065 Score=51.58 Aligned_cols=36 Identities=22% Similarity=0.179 Sum_probs=32.1
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
..++++++|+|++|.+|...++.+...|++|+++.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r 44 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGR 44 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeC
Confidence 457899999999999999988888888999998884
No 290
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.63 E-value=0.0092 Score=51.05 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=49.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE---EeCCcc-cHH-HHHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV---FTESQL-EVK-NVKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v---~~~~~~-~~~-~i~~~~~~~g~~ 262 (288)
++++++|+|++|++|...++.+...|++|+++.+.. ..++..+.++..+.+.. .|-.+. .++ .+.+.....+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999998888999999887421 01111122333343321 222221 122 222222223359
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|++|++.|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999973
No 291
>PRK09242 tropinone reductase; Provisional
Probab=96.62 E-value=0.011 Score=50.52 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.|++++|+|++|++|...++.+...|++++++.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r 41 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVAR 41 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 4789999999999999999999999999999884
No 292
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.62 E-value=0.021 Score=49.67 Aligned_cols=81 Identities=22% Similarity=0.251 Sum_probs=58.7
Q ss_pred CCCCeEEEeCCCChHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-----hCCCC---EEEeCCccc--HHHHHHH
Q 023007 187 NSGDSIVQNGATSIVGQC-IIQIARHRGIHSINIIRDRAGSDEAKEKLK-----GLGAD---EVFTESQLE--VKNVKGL 255 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~-a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-----~~g~~---~v~~~~~~~--~~~i~~~ 255 (288)
+-|++.+|+|++.++|-+ |-++|+ .|.+|+.+. ++++|++..+ +.++. .++|....+ .+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIs----Rt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLIS----RTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEe----CCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence 457899999999999976 555555 899999999 5788886553 33422 345655444 6788888
Q ss_pred hcCCCCccEEEECCCccc
Q 023007 256 LANLPEPALGFNCVGGNS 273 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~~~ 273 (288)
+.+-. +-+.+||+|-..
T Consensus 122 l~~~~-VgILVNNvG~~~ 138 (312)
T KOG1014|consen 122 LAGLD-VGILVNNVGMSY 138 (312)
T ss_pred hcCCc-eEEEEecccccC
Confidence 87744 778999999633
No 293
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.60 E-value=0.021 Score=50.63 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=50.2
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g 270 (288)
+|+|+|++|-+|...++.+...|.+|+++++ +.++...+...+.+.+. .+-.+.+.+.+...+ +|+||++.+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R----~~~~~~~l~~~~v~~v~-~Dl~d~~~l~~al~g---~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVR----NLRKASFLKEWGAELVY-GDLSLPETLPPSFKG---VTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEc----ChHHhhhHhhcCCEEEE-CCCCCHHHHHHHHCC---CCEEEECCC
Confidence 6999999999999999999889999999985 44444444445554332 121223345454443 999999876
Q ss_pred c
Q 023007 271 G 271 (288)
Q Consensus 271 ~ 271 (288)
.
T Consensus 74 ~ 74 (317)
T CHL00194 74 S 74 (317)
T ss_pred C
Confidence 3
No 294
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.59 E-value=0.015 Score=49.68 Aligned_cols=80 Identities=19% Similarity=0.191 Sum_probs=50.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...+..+...|++|+.+.+ ++++.+. +++.+... .+ |-.+ ..+.. +......
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGR----NAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeC----CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999888888999999984 4443322 23344321 22 2211 12222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.+.|.
T Consensus 86 ~~~id~vi~~ag~ 98 (256)
T PRK06124 86 HGRLDILVNNVGA 98 (256)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999884
No 295
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.58 E-value=0.023 Score=45.93 Aligned_cols=95 Identities=23% Similarity=0.200 Sum_probs=63.8
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHHhcC
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLAN 258 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~~~~ 258 (288)
..+++|+.++=.|+ +.|..+++++... ..+++++. .+++..+.. ++||.+.+..-..+..+.+. +
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe----~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~----~ 99 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIE----RDEEALELIERNAARFGVDNLEVVEGDAPEALP----D 99 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEe----cCHHHHHHHHHHHHHhCCCcEEEEeccchHhhc----C
Confidence 56899998887887 4566677777433 46899998 567777655 47888754333322222322 2
Q ss_pred CCCccEEEECCCccc---HHHHHhhccCCCeeC
Q 023007 259 LPEPALGFNCVGGNS---ASKVLKFLRFREEQW 288 (288)
Q Consensus 259 ~g~~D~v~d~~g~~~---~~~a~~~l~~~G~~v 288 (288)
...+|.+|---|... ++.++..|+++||+|
T Consensus 100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV 132 (187)
T COG2242 100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLV 132 (187)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEE
Confidence 213899987666432 399999999999986
No 296
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.58 E-value=0.032 Score=50.54 Aligned_cols=85 Identities=14% Similarity=0.196 Sum_probs=51.3
Q ss_pred CCCCeEEEeCCCChHHHH--HHHHHHHcCCeEEEEEcCCCCCHH------------HHHHHHhCCCCE-EEeCCcc---c
Q 023007 187 NSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGSDE------------AKEKLKGLGADE-VFTESQL---E 248 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~--a~~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~~g~~~-v~~~~~~---~ 248 (288)
..|+++||+|+++++|++ .++.+ ..|++++++.......+. -.+.+++.|... .++-+.. .
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 55666 889998888632111111 123455667542 2332221 2
Q ss_pred HHH-HHHHhcCCCCccEEEECCCcc
Q 023007 249 VKN-VKGLLANLPEPALGFNCVGGN 272 (288)
Q Consensus 249 ~~~-i~~~~~~~g~~D~v~d~~g~~ 272 (288)
.+. +.+.....|++|+++++.+..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 222 222223345699999998865
No 297
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.57 E-value=0.014 Score=49.99 Aligned_cols=80 Identities=15% Similarity=0.216 Sum_probs=48.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----H-hCCCC-EEE--eCCc-ccHHHH-HHHhc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----K-GLGAD-EVF--TESQ-LEVKNV-KGLLA 257 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~-~~g~~-~v~--~~~~-~~~~~i-~~~~~ 257 (288)
++++++|+|+++++|.+.+..+...|++|+.+.+. ++++.+.+ + ..+.. ..+ |-.+ ..++.+ .+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS---NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999888999999887542 33333222 2 22332 122 2211 122222 22222
Q ss_pred CCCCccEEEECCC
Q 023007 258 NLPEPALGFNCVG 270 (288)
Q Consensus 258 ~~g~~D~v~d~~g 270 (288)
..+++|++|++.|
T Consensus 84 ~~g~id~lv~nAg 96 (260)
T PRK08416 84 DFDRVDFFISNAI 96 (260)
T ss_pred hcCCccEEEECcc
Confidence 2346999999986
No 298
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.55 E-value=0.01 Score=49.24 Aligned_cols=95 Identities=13% Similarity=0.004 Sum_probs=60.2
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHH
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV 252 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i 252 (288)
+...++++++||=.|+ +.|..++.+++..+ .+|+.+. .+++..+.++ +.+.. .++..+.. +.+
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD----~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~--~~~ 137 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVE----IVKELAIYAAQNIERLGYWGVVEVYHGDGK--RGL 137 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHHcCCCCcEEEEECCcc--cCC
Confidence 4467889999999888 55777777777764 5788777 4666555443 45543 22222111 011
Q ss_pred HHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
... +.+|+|+-+...... +..++.|++||+++
T Consensus 138 ---~~~-~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lv 170 (205)
T PRK13944 138 ---EKH-APFDAIIVTAAASTIPSALVRQLKDGGVLV 170 (205)
T ss_pred ---ccC-CCccEEEEccCcchhhHHHHHhcCcCcEEE
Confidence 111 249998877665554 78889999999975
No 299
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.54 E-value=0.021 Score=50.42 Aligned_cols=80 Identities=19% Similarity=0.351 Sum_probs=56.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC----EEEeCCcccHHHHHHHhcCCCCcc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD----EVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
.+.+|+|+||+|-+|.+.+..+...|++|.+++++.. ++++.+++++|... .++..+-.+.+.+....+| +|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~-~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g---cd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE-DEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG---CD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc-hhhhHHHHHhcccCcccceEEeccccccchHHHHHhC---CC
Confidence 5789999999999999999999999999999998763 45556678777621 1222221222344444443 99
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
.||-+...
T Consensus 81 gVfH~Asp 88 (327)
T KOG1502|consen 81 GVFHTASP 88 (327)
T ss_pred EEEEeCcc
Confidence 99987654
No 300
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.53 E-value=0.024 Score=50.30 Aligned_cols=82 Identities=17% Similarity=0.246 Sum_probs=49.0
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC---CEEEeCCcccHHHHHHHhcCCCCcc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
..++++||+|++|.+|...+..+...|++|+++.+.....++........+. -.++..+-.+.+.+.++..+ +|
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d 79 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG---CE 79 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC---CC
Confidence 3578999999999999999999988999998877542211111111111121 11221111122344444443 99
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
+||+|+|.
T Consensus 80 ~vih~A~~ 87 (325)
T PLN02989 80 TVFHTASP 87 (325)
T ss_pred EEEEeCCC
Confidence 99999874
No 301
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.52 E-value=0.018 Score=49.14 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=29.7
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+++++|+|++|.+|...++.+...|++++.+.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r 34 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADI 34 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 578999999999999999888888999988874
No 302
>PRK12743 oxidoreductase; Provisional
Probab=96.52 E-value=0.015 Score=49.63 Aligned_cols=80 Identities=16% Similarity=0.204 Sum_probs=49.4
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCC-EEE--eCCc-ccHHH-HHHHhcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVF--TESQ-LEVKN-VKGLLANL 259 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~-~v~--~~~~-~~~~~-i~~~~~~~ 259 (288)
+++++|+|+++++|...++.+...|++|+.+.+. +.++. +.++..+.. +++ |-.+ ..++. +.+.....
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS---DEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999887642 22222 233445533 222 2111 11222 22222222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|.|.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 359999999874
No 303
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.023 Score=48.69 Aligned_cols=80 Identities=20% Similarity=0.183 Sum_probs=49.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH---HHhCCCCE-EEeCCcc---cHHH-HHHHhcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK---LKGLGADE-VFTESQL---EVKN-VKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~~~~g~~~-v~~~~~~---~~~~-i~~~~~~~ 259 (288)
++++++|+|++|++|...++.+...|++|+.+.+ +++..+. +...+... .+..+-. .++. +.+..+..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDI----SPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999998889999988874 3332222 22333221 2211111 1222 22222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (263)
T PRK08226 81 GRIDILVNNAGV 92 (263)
T ss_pred CCCCEEEECCCc
Confidence 459999999884
No 304
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.50 E-value=0.014 Score=55.15 Aligned_cols=75 Identities=20% Similarity=0.246 Sum_probs=53.6
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v 265 (288)
+.+|++|+|+|. |..|++++++++..|++|+++. ..+.+.+.++++|...+...+. .+.+ . .+|+|
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D----~~~~~~~~l~~~g~~~~~~~~~--~~~l----~---~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCD----DDPDALRPHAERGVATVSTSDA--VQQI----A---DYALV 74 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHhCCCEEEcCcch--HhHh----h---cCCEE
Confidence 567899999999 9999999999999999999865 2444555567778743322111 1222 1 38999
Q ss_pred EECCCcccH
Q 023007 266 FNCVGGNSA 274 (288)
Q Consensus 266 ~d~~g~~~~ 274 (288)
|.+.|-+..
T Consensus 75 V~SpGi~~~ 83 (488)
T PRK03369 75 VTSPGFRPT 83 (488)
T ss_pred EECCCCCCC
Confidence 999987654
No 305
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.49 E-value=0.0023 Score=53.21 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=59.9
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHH----HhCCCCEE-EeCCcccHHHH
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEV-FTESQLEVKNV 252 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~i 252 (288)
+.+...+++|++||-+|+ +.|..++-+++..|. +|+.+. ..++..+.+ +.++.+.+ +...+.. .
T Consensus 64 ~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE----~~~~l~~~A~~~l~~~~~~nv~~~~gdg~-~-- 134 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVE----RDPELAERARRNLARLGIDNVEVVVGDGS-E-- 134 (209)
T ss_dssp HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEE----SBHHHHHHHHHHHHHHTTHSEEEEES-GG-G--
T ss_pred HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEEC----ccHHHHHHHHHHHHHhccCceeEEEcchh-h--
Confidence 334577999999999988 557777778887774 567666 345544433 45665433 1111211 0
Q ss_pred HHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
-+... +.||.|+-+.+-+.. ...++.|++||++|
T Consensus 135 -g~~~~-apfD~I~v~~a~~~ip~~l~~qL~~gGrLV 169 (209)
T PF01135_consen 135 -GWPEE-APFDRIIVTAAVPEIPEALLEQLKPGGRLV 169 (209)
T ss_dssp -TTGGG--SEEEEEESSBBSS--HHHHHTEEEEEEEE
T ss_pred -ccccC-CCcCEEEEeeccchHHHHHHHhcCCCcEEE
Confidence 11112 249999988887776 77789999999985
No 306
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.029 Score=46.76 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=50.0
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHHHHHHhcCCCCccEEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~i~~~~~~~g~~D~v~d 267 (288)
++++|+|++|++|...++.+...|++++.+. .+++..+.++..+...+ .|-.+ ..++.+.....+. ++|++|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~----r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATA----RDAAALAALQALGAEALALDVADPASVAGLAWKLDGE-ALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEE----CCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCC-CCCEEEE
Confidence 4799999999999998888888899999987 35555555555554321 22211 1222322222222 4999999
Q ss_pred CCCc
Q 023007 268 CVGG 271 (288)
Q Consensus 268 ~~g~ 271 (288)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 9875
No 307
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.49 E-value=0.066 Score=42.43 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=58.1
Q ss_pred HHHHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007 176 ALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 254 (288)
Q Consensus 176 a~~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~ 254 (288)
.+.++.+.. ..-.|++++|.|= |.+|...++.++.+|++|+++. .++-+.-.+..-|++. . .+.+
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e----~DPi~alqA~~dGf~v-~--------~~~~ 74 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTE----IDPIRALQAAMDGFEV-M--------TLEE 74 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-----SSHHHHHHHHHTT-EE-E---------HHH
T ss_pred HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEE----CChHHHHHhhhcCcEe-c--------CHHH
Confidence 344444333 3568999999999 9999999999999999999997 4666655555556532 1 2223
Q ss_pred HhcCCCCccEEEECCCcccH--HHHHhhccCCC
Q 023007 255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFRE 285 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G 285 (288)
... ..|++|.++|.... ..-++.|+++-
T Consensus 75 a~~---~adi~vtaTG~~~vi~~e~~~~mkdga 104 (162)
T PF00670_consen 75 ALR---DADIFVTATGNKDVITGEHFRQMKDGA 104 (162)
T ss_dssp HTT---T-SEEEE-SSSSSSB-HHHHHHS-TTE
T ss_pred HHh---hCCEEEECCCCccccCHHHHHHhcCCe
Confidence 333 38999999998764 67778887764
No 308
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.019 Score=49.43 Aligned_cols=78 Identities=17% Similarity=0.121 Sum_probs=47.5
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCC--c-ccHHHHH-HHhcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTES--Q-LEVKNVK-GLLANLP 260 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~--~-~~~~~i~-~~~~~~g 260 (288)
++++|+|++|++|...++.+...|++|+++.+ +.++.+ .++..+.+.. +..+ + ..++.+. ......+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADV----NEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 37999999999999988888888999998884 344333 2333343322 2111 1 1122211 1222223
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|++.|.
T Consensus 77 ~id~lI~~ag~ 87 (270)
T PRK05650 77 GIDVIVNNAGV 87 (270)
T ss_pred CCCEEEECCCC
Confidence 59999999884
No 309
>PRK06484 short chain dehydrogenase; Validated
Probab=96.47 E-value=0.018 Score=54.68 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=52.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEE---EeCCc-ccHHHH-HHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV---FTESQ-LEVKNV-KGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v---~~~~~-~~~~~i-~~~~~~~g~ 261 (288)
++++++|+|+++++|.+.++.+...|++|+.+.+ +.++.+ ..++++.... .|-.+ ..++.+ .+.....++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR----NVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGR 79 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999874 455544 3445654322 22221 122222 222222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|++.|.
T Consensus 80 iD~li~nag~ 89 (520)
T PRK06484 80 IDVLVNNAGV 89 (520)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 310
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.019 Score=49.64 Aligned_cols=80 Identities=20% Similarity=0.176 Sum_probs=48.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcccHHHHHHH----hcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGL----LAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~~~~~i~~~----~~~ 258 (288)
+.++++|+|++|.+|...++.+...|++|+++.+ +.++.+ .++..+... ++..+-.+.+.+..+ ...
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGAR----RVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3468999999999999999888888999988874 333332 223334332 122221122222221 111
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.+.|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (274)
T PRK07775 85 LGEIEVLVSGAGD 97 (274)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999975
No 311
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.012 Score=49.91 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=48.1
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhC--CCC-EEE--eCCcc-cHHH-HHHHhc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL--GAD-EVF--TESQL-EVKN-VKGLLA 257 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~--g~~-~v~--~~~~~-~~~~-i~~~~~ 257 (288)
+++++|+|++|++|...++-+...|++|+.+.+ ++++.+.+ .+. +.. +++ |..+. .++. +.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCAR----RTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD 77 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 578999999999999988888888999998884 44444332 111 211 122 22221 1222 222222
Q ss_pred CCCCccEEEECCCc
Q 023007 258 NLPEPALGFNCVGG 271 (288)
Q Consensus 258 ~~g~~D~v~d~~g~ 271 (288)
..+++|++|++.|.
T Consensus 78 ~~~~id~vi~~ag~ 91 (248)
T PRK08251 78 ELGGLDRVIVNAGI 91 (248)
T ss_pred HcCCCCEEEECCCc
Confidence 23359999999873
No 312
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.45 E-value=0.018 Score=49.33 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=50.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EE--eCCcc-cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VF--TESQL-EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++++++.+. +++.. +.++..+... ++ |-.+. .+.. +......
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS---DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999887642 22222 2233344321 12 22221 1222 2222233
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|+++++.|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 3469999999884
No 313
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.45 E-value=0.029 Score=47.26 Aligned_cols=80 Identities=24% Similarity=0.221 Sum_probs=49.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEEeCCcccHHHHH----HHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNVK----GLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i~----~~~~~~g~ 261 (288)
++++++|+|++|.+|...++.+...|+.|+... .+.++.+.+ ..++.. .++..+-.+.+.+. +.....++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHG----TRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999988888899887776 344444433 344432 12221111112222 22222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12936 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 314
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.45 E-value=0.019 Score=48.98 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=50.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEEeCC--c-ccHHH-HHHHhcCCCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTES--Q-LEVKN-VKGLLANLPE 261 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~~~~--~-~~~~~-i~~~~~~~g~ 261 (288)
.+++++|+|++|++|...++.+...|++|+.+.+ +.++.+.+ ++++.. ..+..+ + ..++. +.......++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADI----KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3679999999999999999999989999998874 45544433 334322 112111 1 11222 2222222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|+|.|.
T Consensus 81 id~li~~ag~ 90 (257)
T PRK07067 81 IDILFNNAAL 90 (257)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 315
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.45 E-value=0.02 Score=42.84 Aligned_cols=95 Identities=21% Similarity=0.175 Sum_probs=59.7
Q ss_pred hcCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHHHH
Q 023007 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVKGL 255 (288)
Q Consensus 183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~~~ 255 (288)
...+.++++|+-+|+ |. |..+..+++..+ .+++++. .++...+.++ .++...+ +..+... .....
T Consensus 14 ~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~ 85 (124)
T TIGR02469 14 KLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIE----RNPEALRLIERNARRFGVSNIVIVEGDAPE--ALEDS 85 (124)
T ss_pred HcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEc----CCHHHHHHHHHHHHHhCCCceEEEeccccc--cChhh
Confidence 345677889999998 44 888999998875 5777776 4666666543 4444322 2221111 01111
Q ss_pred hcCCCCccEEEECCCccc----HHHHHhhccCCCeeC
Q 023007 256 LANLPEPALGFNCVGGNS----ASKVLKFLRFREEQW 288 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~~~----~~~a~~~l~~~G~~v 288 (288)
.+ ++|+|+...+... ++.+.+.|+++|+|+
T Consensus 86 -~~--~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li 119 (124)
T TIGR02469 86 -LP--EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIV 119 (124)
T ss_pred -cC--CCCEEEECCcchhHHHHHHHHHHHcCCCCEEE
Confidence 12 4999987654322 388899999999985
No 316
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.023 Score=49.10 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
++++++|+|++|.+|...++.+...|++|+.+.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r 39 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR 39 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Confidence 4689999999999999999999999999999884
No 317
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.0059 Score=52.22 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+|++++|+|++|++|...++.+...|++|+++.+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r 41 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTAR 41 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeC
Confidence 5789999999999999999988889999999884
No 318
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.028 Score=48.63 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
.+++++|+|++|++|...++.+...|++|+++.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 46799999999999999999888899999998864
No 319
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.37 E-value=0.017 Score=45.66 Aligned_cols=79 Identities=18% Similarity=0.291 Sum_probs=44.8
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC--HHHHH----HHHhCCCCE-EEeCCc---ccHHH-HHHHhcC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--DEAKE----KLKGLGADE-VFTESQ---LEVKN-VKGLLAN 258 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~--~~~~~----~~~~~g~~~-v~~~~~---~~~~~-i~~~~~~ 258 (288)
++++|+|+++++|...++.+...|.++++.+. .+ .++.+ .++..+... ++..+- ...+. +.+....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~---r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTS---RSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEE---SSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEee---ecccccccccccccccccccccccccccccccccccccccccccc
Confidence 47999999999999988877777775554443 23 33332 334455321 222111 12222 2222212
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+.+|++|+|.|.
T Consensus 78 ~~~ld~li~~ag~ 90 (167)
T PF00106_consen 78 FGPLDILINNAGI 90 (167)
T ss_dssp HSSESEEEEECSC
T ss_pred ccccccccccccc
Confidence 2259999999985
No 320
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.35 E-value=0.047 Score=49.40 Aligned_cols=94 Identities=17% Similarity=0.202 Sum_probs=64.4
Q ss_pred CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHHHHH------------
Q 023007 190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKG------------ 254 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~i~~------------ 254 (288)
++|.|+|++|.+|..++++.+.. .+++.+++.. .+.++ .+.++++++..+...++...+.++.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~--~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAG--KNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcC--CCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEC
Confidence 57999999999999999998865 5788888743 34444 4566789998876655433222322
Q ss_pred ------HhcCCCCccEEEECCCcc-cHHHHHhhccCCCe
Q 023007 255 ------LLANLPEPALGFNCVGGN-SASKVLKFLRFREE 286 (288)
Q Consensus 255 ------~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~ 286 (288)
+.... .+|+|+++.++. .+...+.+++.|=+
T Consensus 80 ~~~~~~l~~~~-~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~ 117 (385)
T PRK05447 80 EEGLCELAALP-EADVVVAAIVGAAGLLPTLAAIRAGKR 117 (385)
T ss_pred hhHHHHHhcCC-CCCEEEEeCcCcccHHHHHHHHHCCCc
Confidence 22222 389999998775 34677777766543
No 321
>PRK09135 pteridine reductase; Provisional
Probab=96.34 E-value=0.035 Score=46.87 Aligned_cols=34 Identities=15% Similarity=0.184 Sum_probs=30.6
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|.+|..+++.+...|++|+++.+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r 38 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYH 38 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 4579999999999999999888888999999985
No 322
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.029 Score=49.05 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=49.5
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCCC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLP 260 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~g 260 (288)
-++++++|+|++|++|...++.+...|++|+.+.+..... ++..+.++..+.+. ++..+ + ..++. +.+.....+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3468999999999999998888888899999887532111 11122333334332 12111 1 11211 222222223
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|.|.|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 59999999874
No 323
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.028 Score=48.07 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=30.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|++|...++.+...|++++++.+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~ 41 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYN 41 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4679999999999999999888889999988764
No 324
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.032 Score=47.57 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=48.4
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCC--EEEeCCcccHHH----HHHHhcCCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGAD--EVFTESQLEVKN----VKGLLANLPE 261 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~--~v~~~~~~~~~~----i~~~~~~~g~ 261 (288)
+++++|+|++|++|...+..+...|++++++.+ +.++.+. .+.+... ..+..+-.+.+. +.+.....++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDI----DAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999988888888999999884 4444432 2333211 122211111222 2222222235
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|++|.+.|.
T Consensus 78 ~d~vi~~ag~ 87 (257)
T PRK07074 78 VDVLVANAGA 87 (257)
T ss_pred CCEEEECCCC
Confidence 9999999975
No 325
>PRK06484 short chain dehydrogenase; Validated
Probab=96.31 E-value=0.02 Score=54.41 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=53.3
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEE---EeCCc-ccHHH-HHHHhcCCC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEV---FTESQ-LEVKN-VKGLLANLP 260 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v---~~~~~-~~~~~-i~~~~~~~g 260 (288)
..|++++|+|+++++|...++.+...|++|+++. .++++.+.+. +++.... .|-.+ ..++. +.+.....|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIID----RDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999998888999999988 4555555443 4554322 22222 12222 222222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 343 ~id~li~nAg~ 353 (520)
T PRK06484 343 RLDVLVNNAGI 353 (520)
T ss_pred CCCEEEECCCC
Confidence 69999999884
No 326
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.30 E-value=0.028 Score=50.54 Aligned_cols=79 Identities=15% Similarity=0.220 Sum_probs=50.1
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhC--CCC-EEEeCCcccHHHHHHHhcCCCC
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGL--GAD-EVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
-..+.+|||+|++|.+|...++.+...|++|+++.+ +.++.+. ...+ +.. .++..+-.+.+.+.++..+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--- 79 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR----DPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG--- 79 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC---
Confidence 345779999999999999999999989999998874 3333222 2222 111 1222221222344444443
Q ss_pred ccEEEECCCc
Q 023007 262 PALGFNCVGG 271 (288)
Q Consensus 262 ~D~v~d~~g~ 271 (288)
+|+||.+.+.
T Consensus 80 ~d~Vih~A~~ 89 (353)
T PLN02896 80 CDGVFHVAAS 89 (353)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 327
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.30 E-value=0.018 Score=47.47 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=55.4
Q ss_pred CCCeEEEeCC-CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCE-EEeCCc-ccH----HHHHHHhcCC
Q 023007 188 SGDSIVQNGA-TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VFTESQ-LEV----KNVKGLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~-~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~-v~~~~~-~~~----~~i~~~~~~~ 259 (288)
..+.|||+|+ .|++|.+.+.-..+.|+.|+++.+ +-+..+.+. ++|... -+|-.+ +.+ ..++..++|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR----~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G- 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR----RLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG- 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc----ccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-
Confidence 3467999988 688999988888888999999994 566666554 777432 233222 222 345554555
Q ss_pred CCccEEEECCCccc
Q 023007 260 PEPALGFNCVGGNS 273 (288)
Q Consensus 260 g~~D~v~d~~g~~~ 273 (288)
+.|+.+|+.|.+.
T Consensus 81 -kld~L~NNAG~~C 93 (289)
T KOG1209|consen 81 -KLDLLYNNAGQSC 93 (289)
T ss_pred -ceEEEEcCCCCCc
Confidence 7999999988644
No 328
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.29 E-value=0.0054 Score=52.72 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|++|.+.++.+...|++|+.+..
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~ 41 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADI 41 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999999999999999999999998874
No 329
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.031 Score=47.15 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=49.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCC-EEEeCCcc---cHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQL---EVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~-~v~~~~~~---~~~~-i~~~~~~ 258 (288)
++++++|+|++|++|...++.+...|++++.+.+. ++... +.++..+.. .++..+-. .++. +.+....
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG---SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999887642 22222 233334432 12221111 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999884
No 330
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.27 E-value=0.028 Score=48.19 Aligned_cols=84 Identities=8% Similarity=0.049 Sum_probs=48.7
Q ss_pred CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHhCCCC-EEE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRA--GSDEAKEKLKGLGAD-EVF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~--~~~~~~~~~~~~g~~-~v~--~~~~-~~~~~-i~~~~~~ 258 (288)
.|++++|+|++ +++|.+.++.+...|++|+++..... ..++..+.+++.+.. ..+ |-.+ ..++. +......
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 79999999888889999987753211 123333333332211 122 2111 11222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|+|.|.
T Consensus 85 ~g~iD~lv~nag~ 97 (258)
T PRK07370 85 WGKLDILVHCLAF 97 (258)
T ss_pred cCCCCEEEEcccc
Confidence 3469999999984
No 331
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.26 E-value=0.04 Score=46.38 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
.+++++|+|++|.+|...+..+...|++|+++.+.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45799999999999999999999999999887753
No 332
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.26 E-value=0.038 Score=48.92 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=49.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CC--C-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA--D-EVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~--~-~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
.|++|+|+|++|.+|...+..+...|++|+++++... ..++...+... +. . .++..+-.+.+.+.+...+ +|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d 79 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT-DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG---CD 79 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc-chHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC---CC
Confidence 4689999999999999999988888999998886432 11222222111 11 1 1222111122334444443 99
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
+||.+.+.
T Consensus 80 ~vih~A~~ 87 (322)
T PLN02986 80 AVFHTASP 87 (322)
T ss_pred EEEEeCCC
Confidence 99999873
No 333
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.24 E-value=0.025 Score=47.22 Aligned_cols=97 Identities=16% Similarity=0.107 Sum_probs=59.0
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHH
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGL 255 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~ 255 (288)
+...++++++||=+|+ +.|..++.+++..+. +|+.+. .+++..+.+ +++|.+.+.....+..+. +
T Consensus 71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD----~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~---~ 141 (215)
T TIGR00080 71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIE----RIPELAEKAERRLRKLGLDNVIVIVGDGTQG---W 141 (215)
T ss_pred HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHCCCCCeEEEECCcccC---C
Confidence 4467899999999888 556777778877653 577776 466666554 345654321111110000 1
Q ss_pred hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
... ..||+|+-+...... ....+.|+++|+++
T Consensus 142 ~~~-~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv 174 (215)
T TIGR00080 142 EPL-APYDRIYVTAAGPKIPEALIDQLKEGGILV 174 (215)
T ss_pred ccc-CCCCEEEEcCCcccccHHHHHhcCcCcEEE
Confidence 111 149987755444444 77889999999975
No 334
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.24 E-value=0.039 Score=48.12 Aligned_cols=85 Identities=14% Similarity=0.102 Sum_probs=56.2
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEE---eCCc---ccHHH----H
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVF---TESQ---LEVKN----V 252 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~---~~~~---~~~~~----i 252 (288)
.+.++-..|+|+|++.++|++.+..++..|++|.++. ++.+++..++ .++....+ .+.. .++++ +
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~a----r~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~ 103 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITA----RSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI 103 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccCceEEEe----ccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence 3445557999999999999999999999999999999 4677766553 44432211 1211 11222 2
Q ss_pred HHHhcCCCCccEEEECCCcc
Q 023007 253 KGLLANLPEPALGFNCVGGN 272 (288)
Q Consensus 253 ~~~~~~~g~~D~v~d~~g~~ 272 (288)
.++-.-.+.+|.+|+|.|..
T Consensus 104 ~~l~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 104 EELRDLEGPIDNLFCCAGVA 123 (331)
T ss_pred hhhhhccCCcceEEEecCcc
Confidence 22222224589999999963
No 335
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.034 Score=46.61 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=48.3
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCCc-ccHHHHHHHhcCCCCccEEEE
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQ-LEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~~-~~~~~i~~~~~~~g~~D~v~d 267 (288)
+++|+|++|++|...++.+...|++|+.+. .++++.+.+ ++++...+ .|-.+ ..++.+.+...+ ++|++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~----r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVG----ARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH--HLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh--cCcEEEE
Confidence 589999999999999998888999999987 455555433 44444322 22222 223333322222 3999999
Q ss_pred CCC
Q 023007 268 CVG 270 (288)
Q Consensus 268 ~~g 270 (288)
|.|
T Consensus 76 ~ag 78 (223)
T PRK05884 76 VPA 78 (223)
T ss_pred CCC
Confidence 976
No 336
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.23 E-value=0.035 Score=47.56 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=49.6
Q ss_pred CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEE--eCCc-ccHHHHH-HHhcCC
Q 023007 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQ-LEVKNVK-GLLANL 259 (288)
Q Consensus 188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~i~-~~~~~~ 259 (288)
.+++++|+|+ ++++|.+.++.+...|++|+++.+. .+++..+.+ ++++.. ..+ |-.+ ..++.+. ......
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFG--RALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCc--cchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4689999998 7999999998888899999887643 123333333 344421 112 2111 1222222 222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
|++|++|++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 469999999874
No 337
>PRK07985 oxidoreductase; Provisional
Probab=96.22 E-value=0.035 Score=48.70 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=49.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHH-HHHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVK-NVKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~-~i~~~~~~ 258 (288)
++++++|+|+++++|.+.++.+...|++|+++.... +.+..+ .+++.+... ++ |-.+ ..++ .+.+....
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV--EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc--chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568999999999999999998888999998865321 122222 223344332 12 2111 1122 22222233
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|+++++.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 3459999999874
No 338
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.044 Score=46.77 Aligned_cols=84 Identities=23% Similarity=0.342 Sum_probs=49.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcccHHHHH----HHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVK----GLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~~~~~i~----~~~~~ 258 (288)
.+++++|+|++|++|...++.+...|++++.+......+.+..+ .++..+.+. ++..+-.+.+.+. +..+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46799999999999999999998899997777543212222222 223334331 1211111122222 22222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2359999999985
No 339
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.20 E-value=0.061 Score=43.14 Aligned_cols=54 Identities=20% Similarity=0.231 Sum_probs=38.8
Q ss_pred cccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh-HHHHHHHHHHHcCCeEEEEEc
Q 023007 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI-VGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~-vG~~a~~la~~~g~~vi~~~~ 221 (288)
...|+....+...+.....--.|++|+|.|+ |. +|..++..++..|++++++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r 76 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHS 76 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEEC
Confidence 4445444445555555444467899999999 65 699899999999998877774
No 340
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.20 E-value=0.041 Score=50.28 Aligned_cols=88 Identities=22% Similarity=0.228 Sum_probs=53.0
Q ss_pred EEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHh--CCCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 192 IVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG--LGAD-EVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~--~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
|+|+|+ |.+|..+++.+...+- ++++.. .+.++.+.+.+ .+.. ....-+..+.+.+.++..+ .|+|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~----r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~dvVi 72 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVAD----RNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG---CDVVI 72 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEE----SSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT---SSEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEE----CCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc---CCEEE
Confidence 789999 9999999999888764 566666 57777665543 2221 1111112223456777665 89999
Q ss_pred ECCCcccH-HHHHhhccCCCee
Q 023007 267 NCVGGNSA-SKVLKFLRFREEQ 287 (288)
Q Consensus 267 d~~g~~~~-~~a~~~l~~~G~~ 287 (288)
||+|.... ..+..|++.+-.|
T Consensus 73 n~~gp~~~~~v~~~~i~~g~~y 94 (386)
T PF03435_consen 73 NCAGPFFGEPVARACIEAGVHY 94 (386)
T ss_dssp E-SSGGGHHHHHHHHHHHT-EE
T ss_pred ECCccchhHHHHHHHHHhCCCe
Confidence 99998754 4444566555444
No 341
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.20 E-value=0.022 Score=50.46 Aligned_cols=85 Identities=22% Similarity=0.219 Sum_probs=52.9
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCc--ccHHHHHHHh----cCC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLL----ANL 259 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~--~~~~~i~~~~----~~~ 259 (288)
-.|.+++|+|+++++|...+.-+...|++|+..+++....++..+.+.+ .....+....- .+.+.++.+. ...
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 4568999999999999999999999999999999643222222222222 33333322221 1233333322 222
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
++.|+.|+++|-
T Consensus 113 ~~ldvLInNAGV 124 (314)
T KOG1208|consen 113 GPLDVLINNAGV 124 (314)
T ss_pred CCccEEEeCccc
Confidence 359999999884
No 342
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.18 E-value=0.031 Score=47.50 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=47.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLANLP 260 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g 260 (288)
++++|+|++|++|...++.+...|++++.+.+ ++++.+ .++..+... .+ |-.+ ..++. +.......+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADL----NEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999988899999998874 333322 223334321 12 2111 12222 222222233
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 77 ~id~vi~~ag~ 87 (254)
T TIGR02415 77 GFDVMVNNAGV 87 (254)
T ss_pred CCCEEEECCCc
Confidence 59999999875
No 343
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.18 E-value=0.014 Score=57.08 Aligned_cols=81 Identities=17% Similarity=0.121 Sum_probs=56.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-------------C----HHHHHHHHhCCCCEEEeCCcccHH
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------------S----DEAKEKLKGLGADEVFTESQLEVK 250 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-------------~----~~~~~~~~~~g~~~v~~~~~~~~~ 250 (288)
.+++|+|+|+ |..|+.++..++..|++|++..+.+.. . +...++++++|++..++..-..--
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 4899999999 999999999999999999888744310 0 124567788998766665321100
Q ss_pred HHHHHhcCCCCccEEEECCCcc
Q 023007 251 NVKGLLANLPEPALGFNCVGGN 272 (288)
Q Consensus 251 ~i~~~~~~~g~~D~v~d~~g~~ 272 (288)
.+.++.. ++|.||.++|..
T Consensus 388 ~~~~l~~---~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTS---EYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHh---cCCEEEEeCCCC
Confidence 1222322 399999999974
No 344
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.18 E-value=0.029 Score=44.95 Aligned_cols=90 Identities=20% Similarity=0.181 Sum_probs=58.2
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC------------------cccHHH
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES------------------QLEVKN 251 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~------------------~~~~~~ 251 (288)
.+|+|+|+ |.+|+.|+++++.+|++++... ...++.+..+..+...+.... ......
T Consensus 21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPD----ERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHTT-EEEEEE----SSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred eEEEEECC-CHHHHHHHHHHhHCCCEEEecc----CCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 68999998 9999999999999999999997 577888888777765554310 011123
Q ss_pred HHHHhcCCCCccEEEECC---C--cccH--HHHHhhccCCCee
Q 023007 252 VKGLLANLPEPALGFNCV---G--GNSA--SKVLKFLRFREEQ 287 (288)
Q Consensus 252 i~~~~~~~g~~D~v~d~~---g--~~~~--~~a~~~l~~~G~~ 287 (288)
+.+.... +|+++.+. + .+.+ +..++.|+++..+
T Consensus 96 f~~~i~~---~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvI 135 (168)
T PF01262_consen 96 FAEFIAP---ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVI 135 (168)
T ss_dssp HHHHHHH----SEEEEHHHBTTSS---SBEHHHHHTSSTTEEE
T ss_pred HHHHHhh---CcEEeeecccCCCCCCEEEEhHHhhccCCCceE
Confidence 3343332 89888642 2 1222 7777888876544
No 345
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.16 E-value=0.022 Score=53.53 Aligned_cols=83 Identities=17% Similarity=0.184 Sum_probs=56.1
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-------------C----HHHHHHHHhCCCCEEEeCCcccH
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------------S----DEAKEKLKGLGADEVFTESQLEV 249 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-------------~----~~~~~~~~~~g~~~v~~~~~~~~ 249 (288)
..+++|+|+|+ |..|+.++..++..|++|+++...+.. . ....++++++|.+..++......
T Consensus 139 ~~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence 36789999999 999999999999999998887643210 0 13456778899876655432110
Q ss_pred HHHHHHhcCCCCccEEEECCCccc
Q 023007 250 KNVKGLLANLPEPALGFNCVGGNS 273 (288)
Q Consensus 250 ~~i~~~~~~~g~~D~v~d~~g~~~ 273 (288)
-.+..+.. ++|.||.++|...
T Consensus 218 ~~~~~~~~---~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 ISLDDLLE---DYDAVFLGVGTYR 238 (467)
T ss_pred cCHHHHHh---cCCEEEEEeCCCC
Confidence 01122222 3999999999743
No 346
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.027 Score=47.61 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=29.3
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
++++|+|++|++|...++.+...|++|+++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r 33 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAAR 33 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 58999999999999999988889999999984
No 347
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.16 E-value=0.046 Score=48.44 Aligned_cols=79 Identities=20% Similarity=0.179 Sum_probs=48.4
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHH-HHhCCC--C--EEE--eCCcc-cHHH-HHHHhcC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEK-LKGLGA--D--EVF--TESQL-EVKN-VKGLLAN 258 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~-~~~~g~--~--~v~--~~~~~-~~~~-i~~~~~~ 258 (288)
+++++|+|+++++|...++.+...| ++|+.+.+ ++++.+. .+++.. . .++ |-.+. .++. +.+....
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 78 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACR----DFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES 78 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999888888889 89998884 4444433 233321 1 112 22111 1222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|++|++.|.
T Consensus 79 ~~~iD~lI~nAG~ 91 (314)
T TIGR01289 79 GRPLDALVCNAAV 91 (314)
T ss_pred CCCCCEEEECCCc
Confidence 2359999999874
No 348
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.16 E-value=0.029 Score=47.51 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=47.1
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHH-HHHHHhcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVK-NVKGLLANLP 260 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~-~i~~~~~~~g 260 (288)
++++|+|++|++|...++.+...|++++++.+. ++++.+ .++..+... .+..+-. ..+ .+.+.....+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR---DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 589999999999999998888889998876532 333322 233333322 2221111 121 1222222223
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|.|.|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06947 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCcc
Confidence 59999999974
No 349
>PRK05855 short chain dehydrogenase; Validated
Probab=96.16 E-value=0.024 Score=54.23 Aligned_cols=80 Identities=21% Similarity=0.227 Sum_probs=50.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~ 258 (288)
.+.+++|+|++|++|...++-+...|++|+.+.+ ++++.+. +++.|... ++ |-.+ ..++. +.+....
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDI----DEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4579999999999999988888889999998884 4444433 23344321 12 2111 11222 2222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|++|++|+|.|.
T Consensus 390 ~g~id~lv~~Ag~ 402 (582)
T PRK05855 390 HGVPDIVVNNAGI 402 (582)
T ss_pred cCCCcEEEECCcc
Confidence 3459999999985
No 350
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.15 E-value=0.033 Score=46.89 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=30.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
+.++++|+|++|.+|...++.+...|++++++.+.
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 34799999999999999999999999998887653
No 351
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.14 E-value=0.088 Score=48.55 Aligned_cols=78 Identities=9% Similarity=0.031 Sum_probs=51.9
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPE 261 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~ 261 (288)
..--.+++|+|+|+ |++|.+++..+...|++ ++++. ++.++.+ +..+++...++. ++.+.+... .
T Consensus 176 ~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~n----Rt~~ra~~La~~~~~~~~~~-----~~~l~~~l~---~ 242 (414)
T PRK13940 176 LDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLAN----RTIEKAQKITSAFRNASAHY-----LSELPQLIK---K 242 (414)
T ss_pred hcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHHhcCCeEec-----HHHHHHHhc---c
Confidence 33346789999999 99999999999999975 55554 4555544 444565212221 234444333 3
Q ss_pred ccEEEECCCcccH
Q 023007 262 PALGFNCVGGNSA 274 (288)
Q Consensus 262 ~D~v~d~~g~~~~ 274 (288)
.|+||+|++.+..
T Consensus 243 aDiVI~aT~a~~~ 255 (414)
T PRK13940 243 ADIIIAAVNVLEY 255 (414)
T ss_pred CCEEEECcCCCCe
Confidence 9999999998664
No 352
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.054 Score=45.76 Aligned_cols=78 Identities=19% Similarity=0.150 Sum_probs=47.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-CEEEeCCcccHHHHHHHhcCC-CCccEEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQLEVKNVKGLLANL-PEPALGFN 267 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~i~~~~~~~-g~~D~v~d 267 (288)
++++|+|++|++|...+..+...|++|+++. .++++.+.+.+.+. -..+..+-.+.+.+.++.... ...|+++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACG----RNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 5799999999999998888888899999988 46666665544331 122221111223333332221 12677777
Q ss_pred CCCc
Q 023007 268 CVGG 271 (288)
Q Consensus 268 ~~g~ 271 (288)
+.|.
T Consensus 78 ~ag~ 81 (240)
T PRK06101 78 NAGD 81 (240)
T ss_pred cCcc
Confidence 7763
No 353
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.14 E-value=0.0099 Score=55.42 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=42.8
Q ss_pred hcCCCCCCeEE----EeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCC
Q 023007 183 FTTLNSGDSIV----QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTES 245 (288)
Q Consensus 183 ~~~~~~g~~vl----I~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~ 245 (288)
..+.++|++++ |+|++|++|.+++++++..|++|+.+.. .+.+....+..+.+ .+++..
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~d~~ 91 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANND----GGLTWAAGWGDRFGALVFDAT 91 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCc----cccccccCcCCcccEEEEECC
Confidence 35678899988 8998899999999999999999998863 33333333344554 345543
No 354
>PRK05599 hypothetical protein; Provisional
Probab=96.13 E-value=0.034 Score=47.29 Aligned_cols=76 Identities=25% Similarity=0.242 Sum_probs=45.3
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC--EEE--eCCcc-cHHHH-HHHhcCCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD--EVF--TESQL-EVKNV-KGLLANLP 260 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~--~v~--~~~~~-~~~~i-~~~~~~~g 260 (288)
+++|+|+++++|.+.++.+. .|++|+.+.+ ++++.+ .+++.+.+ ..+ |-.+. .++.+ .+.....|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAAR----RPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeC----CHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 68999999999998777665 4999999884 444443 23344432 222 22121 12221 11222223
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|++.|.
T Consensus 77 ~id~lv~nag~ 87 (246)
T PRK05599 77 EISLAVVAFGI 87 (246)
T ss_pred CCCEEEEecCc
Confidence 59999999875
No 355
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.13 E-value=0.034 Score=46.79 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=29.0
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
++++|+|++|++|...++.+...|++++++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999999999999999999999998875
No 356
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.13 E-value=0.039 Score=46.81 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=29.7
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
++++||+|++|.+|...+..+...|++|+++.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r 33 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDL 33 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC
Confidence 368999999999999999888889999999984
No 357
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.12 E-value=0.068 Score=45.36 Aligned_cols=77 Identities=22% Similarity=0.267 Sum_probs=49.0
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCE-EE--eCCc-ccHHH-HHHHhcCCCCccE
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VF--TESQ-LEVKN-VKGLLANLPEPAL 264 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g~~D~ 264 (288)
+++|+|++|++|.+.+..+...|++|+++. .++++.+.+. .++... .+ |-.+ ..++. +.+.....+++|+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATG----RRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 689999999999999999999999999988 4555555443 344321 11 2111 11222 2222222235999
Q ss_pred EEECCCc
Q 023007 265 GFNCVGG 271 (288)
Q Consensus 265 v~d~~g~ 271 (288)
++.+.|.
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9999874
No 358
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.11 E-value=0.048 Score=45.15 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=28.9
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
..+|+|.|+ |++|..+++.+...|..-+.++|.+
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 378999999 9999999999999999766666654
No 359
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.10 E-value=0.043 Score=46.41 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EEeCCccc---HH-HHHHHhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLE---VK-NVKGLLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~~~~~~~---~~-~i~~~~~~ 258 (288)
++++++|+|++|++|...+..+...|+++++..+. +++.. +.++..+.+. .+..+-.+ ++ .+.+....
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS---SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC---cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999998888889999876532 23332 2223334322 12221111 21 12222222
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+.+|++|.|.|.
T Consensus 82 ~~~id~vi~~ag~ 94 (247)
T PRK12935 82 FGKVDILVNNAGI 94 (247)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999885
No 360
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.062 Score=45.68 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=29.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
.+++++|+|+++++|.+.++.+...|++|++..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~ 35 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY 35 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 468999999999999999999999999998764
No 361
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.044 Score=46.58 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=28.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
.+++++|+|++|++|...++.+...|++++++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~ 37 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY 37 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 357999999999999999998888899987753
No 362
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.06 E-value=0.068 Score=45.30 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=29.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|++|...+..+...|++|+.+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 3578999999999999999988889999988763
No 363
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.052 Score=45.39 Aligned_cols=75 Identities=15% Similarity=0.101 Sum_probs=47.1
Q ss_pred EEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC--CCC-EEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007 193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGFNC 268 (288)
Q Consensus 193 lI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~d~ 268 (288)
+|+|++|++|...++.+...|++|+.+.+ ++++.+.+ ..+ +.. +++..+-.+.+.+.+.....+++|++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASR----SRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 58999999999988888889999999884 44444332 222 221 22222222223344433333459999999
Q ss_pred CCc
Q 023007 269 VGG 271 (288)
Q Consensus 269 ~g~ 271 (288)
.|.
T Consensus 77 ag~ 79 (230)
T PRK07041 77 AAD 79 (230)
T ss_pred CCC
Confidence 874
No 364
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.05 E-value=0.058 Score=46.02 Aligned_cols=77 Identities=12% Similarity=0.097 Sum_probs=47.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-h-CCCCEE-EeCCcccHHHHHHHhcCCCCccE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G-LGADEV-FTESQLEVKNVKGLLANLPEPAL 264 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~-~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~ 264 (288)
.+.+|+|+|++|.+|...++.+...|++|+++++ ++++..... . .++..+ .|..+. .+.+.+.... ++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R----~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~~~--~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR----DVDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAIGD--DSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec----CHHHHHHhcccCCceEEEEeeCCCC-HHHHHHHhhc--CCCE
Confidence 3579999999999999999888888999999884 444433221 1 112211 222221 1233333211 3999
Q ss_pred EEECCCc
Q 023007 265 GFNCVGG 271 (288)
Q Consensus 265 v~d~~g~ 271 (288)
||.+.|.
T Consensus 89 vi~~~g~ 95 (251)
T PLN00141 89 VICATGF 95 (251)
T ss_pred EEECCCC
Confidence 9998774
No 365
>PLN02240 UDP-glucose 4-epimerase
Probab=96.05 E-value=0.063 Score=48.07 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=48.1
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC----CCC-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GAD-EVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
+++|+|+|++|.+|...++.+...|.+|+++.+......+..+.+... +.. ..+..+-.+.+.+..+.... ++|
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-~~d 83 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-RFD 83 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-CCC
Confidence 578999999999999999888888999988864221122222222211 111 11211111223444433322 399
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
.||+|.+.
T Consensus 84 ~vih~a~~ 91 (352)
T PLN02240 84 AVIHFAGL 91 (352)
T ss_pred EEEEcccc
Confidence 99999874
No 366
>PLN02686 cinnamoyl-CoA reductase
Probab=96.04 E-value=0.052 Score=49.24 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=32.1
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
...+++|||+|++|.+|..+++.+...|++|+++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r 85 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD 85 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC
Confidence 455789999999999999999999999999998874
No 367
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.028 Score=55.01 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=49.9
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EE--eCCc-ccHHH-HHHHhcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VF--TESQ-LEVKN-VKGLLANL 259 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~ 259 (288)
+++++|+|++|++|...+..+...|++|+++.+ ++++.+.+ +..+... ++ |-.+ ..++. +.+.....
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVAR----NGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 679999999999999999888888999999984 45444332 2233321 12 1111 11222 22222233
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
|++|++|+|.|.
T Consensus 447 g~id~li~~Ag~ 458 (657)
T PRK07201 447 GHVDYLVNNAGR 458 (657)
T ss_pred CCCCEEEECCCC
Confidence 459999999984
No 368
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.037 Score=47.99 Aligned_cols=77 Identities=22% Similarity=0.160 Sum_probs=46.0
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHHHHHHhcCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKNVKGLLANLP 260 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~i~~~~~~~g 260 (288)
+++++|+|+ |++|...++.+. .|++|+++.+ ++++.+ .++..+.+. ++ |-.+ ..++.+.+.....+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g 75 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY----NEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLG 75 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcC
Confidence 367899998 799999888875 7999999884 344332 223334321 22 2222 12222222222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|+|.|.
T Consensus 76 ~id~li~nAG~ 86 (275)
T PRK06940 76 PVTGLVHTAGV 86 (275)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 369
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.073 Score=44.89 Aligned_cols=84 Identities=10% Similarity=0.083 Sum_probs=49.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EEeCCcc---cHHHHHH-HhcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQL---EVKNVKG-LLAN 258 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~~~~~~---~~~~i~~-~~~~ 258 (288)
.+.+++|+|++|++|...+..+...|++++++.+....++++.+.+ +..+... ++..+-. .++.+.+ ....
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999988888889999988654322233333322 2333321 2222211 1222221 1111
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.+++|.+|.+.|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 2259999999885
No 370
>PLN02427 UDP-apiose/xylose synthase
Probab=95.99 E-value=0.052 Score=49.48 Aligned_cols=80 Identities=11% Similarity=0.061 Sum_probs=49.4
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCC------CEEEeCCcccHHHHHHHh
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLL 256 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~i~~~~ 256 (288)
++..+..+|||+|++|-+|...++.+... |.+|+++.+ +.++...+...+. -.++..+-.+.+.+.+..
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r----~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 84 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDV----YNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI 84 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEec----CchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh
Confidence 33444568999999999999988888877 588888873 3334333332221 112211111223455544
Q ss_pred cCCCCccEEEECCC
Q 023007 257 ANLPEPALGFNCVG 270 (288)
Q Consensus 257 ~~~g~~D~v~d~~g 270 (288)
.+ +|+||.+.+
T Consensus 85 ~~---~d~ViHlAa 95 (386)
T PLN02427 85 KM---ADLTINLAA 95 (386)
T ss_pred hc---CCEEEEccc
Confidence 43 999999987
No 371
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.99 E-value=0.036 Score=46.72 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=29.0
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEE-Ec
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-IR 221 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~-~~ 221 (288)
+++++|+|++|.+|...+..+...|++++.+ .+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r 38 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI 38 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5789999999999999888888889999888 63
No 372
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.99 E-value=0.064 Score=45.16 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=29.4
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
++++|+|++|++|...++.+...|++|+.+.+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFS 35 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 579999999999999998888889999999854
No 373
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.98 E-value=0.05 Score=46.81 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=28.8
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++|+|+++++|...++.+...|++|+++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~ 33 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH 33 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC
Confidence 47899999999999999999999999998764
No 374
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.98 E-value=0.05 Score=45.08 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=50.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++|+|.|+ |.+|...+..+...|++++++... ..++-.+.+.. +.- .+..+......+ . ++|+||-
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~--~~~~l~~l~~~-~~i-~~~~~~~~~~~l----~---~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE--LTENLVKLVEE-GKI-RWKQKEFEPSDI----V---DAFLVIA 76 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC--CCHHHHHHHhC-CCE-EEEecCCChhhc----C---CceEEEE
Confidence 5689999999 999999998888899999888632 23333333333 211 111111110111 1 3899999
Q ss_pred CCCcccHHHHHhh
Q 023007 268 CVGGNSASKVLKF 280 (288)
Q Consensus 268 ~~g~~~~~~a~~~ 280 (288)
|++++..+..+..
T Consensus 77 aT~d~elN~~i~~ 89 (202)
T PRK06718 77 ATNDPRVNEQVKE 89 (202)
T ss_pred cCCCHHHHHHHHH
Confidence 9999888555543
No 375
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.038 Score=46.76 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=47.5
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EE--eCCcc-cHHH-HHHHhcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VF--TESQL-EVKN-VKGLLANL 259 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~~ 259 (288)
+++++|+|++|++|...++.+...|++++.+.. .++++. +.++..+... ++ |-.+. .++. +.+.....
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYL---RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecC---CCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 468999999999999988888888998876642 123332 2233444332 22 21211 1222 22222223
Q ss_pred CCccEEEECCCc
Q 023007 260 PEPALGFNCVGG 271 (288)
Q Consensus 260 g~~D~v~d~~g~ 271 (288)
+++|++|+|.|.
T Consensus 79 ~~id~li~~ag~ 90 (248)
T PRK06123 79 GRLDALVNNAGI 90 (248)
T ss_pred CCCCEEEECCCC
Confidence 359999999875
No 376
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.95 E-value=0.07 Score=46.80 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=28.5
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIR 221 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~ 221 (288)
-++++++|+|+ |+.|.+++..+...|++ ++++.+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R 158 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNI 158 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC
Confidence 35789999999 89999999888889997 766664
No 377
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.91 E-value=0.056 Score=47.72 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=29.1
Q ss_pred CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEE
Q 023007 188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSIN 218 (288)
Q Consensus 188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~ 218 (288)
.|++++|+|+ +.++|.+.++.+...|++|++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 5899999999 799999999999999999988
No 378
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.91 E-value=0.054 Score=46.02 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=48.1
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCC-EEE--eCCcc-cHHH-HHHHhcCCCCcc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEPA 263 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~-~v~--~~~~~-~~~~-i~~~~~~~g~~D 263 (288)
++++|+|++|++|...+..+...|++++++.+..... ++..+.++..+.. .++ |-.+. .... +.......+++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999988888999999887532101 1112223333322 222 22211 1222 222222223599
Q ss_pred EEEECCCc
Q 023007 264 LGFNCVGG 271 (288)
Q Consensus 264 ~v~d~~g~ 271 (288)
++|.|.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999874
No 379
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.90 E-value=0.049 Score=46.14 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=48.0
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH---HHHHhCCCC-EEE--eCCcc-cHH-HHHHHhcCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGAD-EVF--TESQL-EVK-NVKGLLANLP 260 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~g~~-~v~--~~~~~-~~~-~i~~~~~~~g 260 (288)
+++++|+|++|.+|...++-+...|++++.+.+.. .++.. ..+++.+.. ..+ |-.+. ..+ .+.......+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 58999999999999998888888999988776431 12222 233344432 122 21111 111 1222222223
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (252)
T PRK06077 84 VADILVNNAGL 94 (252)
T ss_pred CCCEEEECCCC
Confidence 59999999984
No 380
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.90 E-value=0.039 Score=44.48 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=48.7
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g 270 (288)
+|.|+|++|.+|...++-|+.+|..|+++++ ++.+....+.. .++..+-.+...+.+... ++|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR----n~~K~~~~~~~---~i~q~Difd~~~~a~~l~---g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVR----NASKLAARQGV---TILQKDIFDLTSLASDLA---GHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEe----ChHhccccccc---eeecccccChhhhHhhhc---CCceEEEecc
Confidence 5889999999999999999999999999994 66665432111 122111112233333333 3999999987
Q ss_pred cc
Q 023007 271 GN 272 (288)
Q Consensus 271 ~~ 272 (288)
..
T Consensus 72 ~~ 73 (211)
T COG2910 72 AG 73 (211)
T ss_pred CC
Confidence 65
No 381
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.90 E-value=0.064 Score=45.47 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
++++++|+|++|.+|...++.+...|++|+.+.+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~ 40 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQ 40 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEec
Confidence 4689999999999999999988889999999984
No 382
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.87 E-value=0.077 Score=47.23 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=46.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH-HhCCCC--EEEeCCcccHHHHHHHhcCCCCc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL-KGLGAD--EVFTESQLEVKNVKGLLANLPEP 262 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~ 262 (288)
.|++|||+|++|.+|...++.+...| .+|+++.+ ++.+.+.+ +.+... .++..+-.+.+.+.+...+ +
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r----~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~---i 75 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSR----DELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG---V 75 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcC----ChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhc---C
Confidence 46899999999999999888777765 67777763 23322222 223211 1221121223445444443 9
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|+||++.|.
T Consensus 76 D~Vih~Ag~ 84 (324)
T TIGR03589 76 DYVVHAAAL 84 (324)
T ss_pred CEEEECccc
Confidence 999999874
No 383
>PRK04148 hypothetical protein; Provisional
Probab=95.87 E-value=0.11 Score=39.93 Aligned_cols=94 Identities=19% Similarity=0.199 Sum_probs=61.9
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe----CCccc-------------
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT----ESQLE------------- 248 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~----~~~~~------------- 248 (288)
-.++.++++.|. | .|...+..+...|.+|+++. .+++..+.+++.+.+.+.+ .+...
T Consensus 14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaID----i~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp 87 (134)
T PRK04148 14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVID----INEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPP 87 (134)
T ss_pred cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence 345688999999 6 88756666667899999998 6888888888777654433 22110
Q ss_pred ---HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007 249 ---VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE 286 (288)
Q Consensus 249 ---~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~ 286 (288)
...+.++.+.-+ .|++|-..+++....-+++...+|.
T Consensus 88 ~el~~~~~~la~~~~-~~~~i~~l~~e~~~~~~kl~ny~~~ 127 (134)
T PRK04148 88 RDLQPFILELAKKIN-VPLIIKPLSGEEPIKELKLINYKGK 127 (134)
T ss_pred HHHHHHHHHHHHHcC-CCEEEEcCCCCCCCcceEEEecCCe
Confidence 123444444444 7788877777765555666665554
No 384
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.86 E-value=0.099 Score=46.97 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=37.3
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
|||.-++....++ +++|+|+|++|-+|...+..+...|.+|+++.+.
T Consensus 2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5666665444444 4789999999999999999999999999988753
No 385
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.85 E-value=0.069 Score=47.16 Aligned_cols=35 Identities=20% Similarity=0.460 Sum_probs=31.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
.+++|||+|++|.+|...+..+...|.+|+++++.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 35789999999999999999999999999988854
No 386
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=95.85 E-value=0.057 Score=47.52 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=45.1
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g 270 (288)
+|||+|++|.+|...++.+...|.+|+++.+......++.....+.+.-..+..+-.+.+.+....... ++|+||+|+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEH-KIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhC-CCcEEEECcc
Confidence 489999999999999999988999988765321111222222111111112221111222333332222 4999999997
Q ss_pred c
Q 023007 271 G 271 (288)
Q Consensus 271 ~ 271 (288)
.
T Consensus 80 ~ 80 (328)
T TIGR01179 80 L 80 (328)
T ss_pred c
Confidence 4
No 387
>PLN02214 cinnamoyl-CoA reductase
Probab=95.84 E-value=0.078 Score=47.57 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=31.9
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
.++++|+|+|++|.+|...+..+...|.+|+++++.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 43 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN 43 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 356899999999999999999999999999998853
No 388
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.82 E-value=0.069 Score=47.69 Aligned_cols=80 Identities=16% Similarity=0.280 Sum_probs=48.8
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC---CCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GADEVFTESQLEVKNVKGLLANLPEPA 263 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~i~~~~~~~g~~D 263 (288)
..+++|||+|++|.+|...+..+...|++|+++++... .......+..+ +--.++..+-.+.+.+.+... ++|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d 82 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-NQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA---GCD 82 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh---cCC
Confidence 34789999999999999999999999999988875421 11111112222 211222222112233444443 399
Q ss_pred EEEECCC
Q 023007 264 LGFNCVG 270 (288)
Q Consensus 264 ~v~d~~g 270 (288)
+||++++
T Consensus 83 ~vih~A~ 89 (338)
T PLN00198 83 LVFHVAT 89 (338)
T ss_pred EEEEeCC
Confidence 9999987
No 389
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.82 E-value=0.057 Score=43.02 Aligned_cols=84 Identities=19% Similarity=0.229 Sum_probs=60.4
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc----cHHHHHHH-hcCCCC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGL-LANLPE 261 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~i~~~-~~~~g~ 261 (288)
.+|--.+|+|+++++|.++++-+...|+.++...-. +....+.++++|-..++...+- ++.....+ ...+|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp---~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgr 83 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLP---QSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGR 83 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCC---cccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence 345556899999999999999999999999888632 4455678899998888776442 23222222 233456
Q ss_pred ccEEEECCCccc
Q 023007 262 PALGFNCVGGNS 273 (288)
Q Consensus 262 ~D~v~d~~g~~~ 273 (288)
+|+.+||.|...
T Consensus 84 ld~~vncagia~ 95 (260)
T KOG1199|consen 84 LDALVNCAGIAY 95 (260)
T ss_pred eeeeeeccceee
Confidence 999999999643
No 390
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.81 E-value=0.059 Score=48.35 Aligned_cols=82 Identities=13% Similarity=0.202 Sum_probs=50.9
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC------------------HHHH----HHHHhCCCCEEEeCC-
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS------------------DEAK----EKLKGLGADEVFTES- 245 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~------------------~~~~----~~~~~~g~~~v~~~~- 245 (288)
+.+|+|.|+ |++|..+++.+.+.|...+.++|.+.-. ..|. +.++++..+--+...
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 368999999 9999999999999999777766654200 0111 334455443222111
Q ss_pred -cccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007 246 -QLEVKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 246 -~~~~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
+...+.+.++..+ +|+||||+.+...
T Consensus 103 ~~~~~~~~~~~~~~---~DlVid~~D~~~~ 129 (338)
T PRK12475 103 TDVTVEELEELVKE---VDLIIDATDNFDT 129 (338)
T ss_pred ccCCHHHHHHHhcC---CCEEEEcCCCHHH
Confidence 1112344555443 9999999987555
No 391
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.81 E-value=0.12 Score=45.04 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=41.0
Q ss_pred ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+|+.....+..+....---.|++|+|.|.+..+|.-++.++...|++|+++-+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s 190 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS 190 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 455544445555555433457899999999777999999999999999998873
No 392
>PLN02650 dihydroflavonol-4-reductase
Probab=95.81 E-value=0.074 Score=47.76 Aligned_cols=35 Identities=20% Similarity=0.422 Sum_probs=31.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
..++|||+|++|.+|...+..+...|.+|+++++.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~ 38 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRD 38 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 45789999999999999999999999999988754
No 393
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.80 E-value=0.062 Score=44.88 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=28.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
.+|+|.|+ |++|..+++.+.+.|...+.++|.+
T Consensus 29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 68999999 9999999999999999877777654
No 394
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.78 E-value=0.068 Score=44.97 Aligned_cols=92 Identities=15% Similarity=0.060 Sum_probs=60.2
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC--EEEeCCcccHHHHHHHhcCCCCccE
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPAL 264 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~D~ 264 (288)
-+|.+||=.|++| |+++.-+|+. |++|+++. .+++..+.++.-... --++|+....+.+.. ..++||+
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr~-Ga~VtgiD----~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~---~~~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLARL-GASVTGID----ASEKPIEVAKLHALESGVNIDYRQATVEDLAS---AGGQFDV 127 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHHC-CCeeEEec----CChHHHHHHHHhhhhccccccchhhhHHHHHh---cCCCccE
Confidence 4788999999855 4555555554 89999997 688888877622111 114555543333333 2236999
Q ss_pred EEEC-----CCccc--HHHHHhhccCCCeeC
Q 023007 265 GFNC-----VGGNS--ASKVLKFLRFREEQW 288 (288)
Q Consensus 265 v~d~-----~g~~~--~~~a~~~l~~~G~~v 288 (288)
|+.. +..+. ...+.++++|+|.++
T Consensus 128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf 158 (243)
T COG2227 128 VTCMEVLEHVPDPESFLRACAKLVKPGGILF 158 (243)
T ss_pred EEEhhHHHccCCHHHHHHHHHHHcCCCcEEE
Confidence 9874 44433 377899999999864
No 395
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.76 E-value=0.073 Score=44.79 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=54.1
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHH-----------------HHHHhCCCCEEEeCCccc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---GSDEAK-----------------EKLKGLGADEVFTESQLE 248 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~-----------------~~~~~~g~~~v~~~~~~~ 248 (288)
...|+|.|. |+||.+++..+.+.|+.-+.++|-+. .+-++. +..+.+.+..=++..+.+
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 378999999 99999999999999997776665443 222221 122233333323333332
Q ss_pred --HHHHHHHhcCCCCccEEEECCCcccH
Q 023007 249 --VKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 249 --~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
.+.+.++... ++|.|+||.-+-..
T Consensus 109 ~t~en~~~~~~~--~~DyvIDaiD~v~~ 134 (263)
T COG1179 109 ITEENLEDLLSK--GFDYVIDAIDSVRA 134 (263)
T ss_pred hCHhHHHHHhcC--CCCEEEEchhhhHH
Confidence 2567777776 59999999887554
No 396
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.75 E-value=0.06 Score=45.40 Aligned_cols=79 Identities=14% Similarity=0.067 Sum_probs=47.3
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEE--eCCcc-cHHH-HHHHhcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVF--TESQL-EVKN-VKGLLANLP 260 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~--~~~~~-~~~~-i~~~~~~~g 260 (288)
++++|+|++|++|...++.+...|++|+++.. .++++.+ .++..+.. .++ |-.+. .++. +.+.....+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQ---QNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---CChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 47999999999999999988889999987542 2333322 22333432 122 22111 2222 222222234
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 59999999985
No 397
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.73 E-value=0.048 Score=48.71 Aligned_cols=35 Identities=20% Similarity=0.274 Sum_probs=31.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
++++|||+|++|.+|...++.+...|++|+++.+.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~ 39 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRR 39 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecc
Confidence 46899999999999999999999999999998753
No 398
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.69 E-value=0.069 Score=47.91 Aligned_cols=81 Identities=12% Similarity=0.208 Sum_probs=50.2
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH------------------HH----HHHHHhCCCCEEEeCC--
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD------------------EA----KEKLKGLGADEVFTES-- 245 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~------------------~~----~~~~~~~g~~~v~~~~-- 245 (288)
.+|+|.|+ |++|..+++.+...|..-+.++|.+.-.. .| .+.++++..+--+...
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~ 103 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ 103 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 78999999 99999999999999996666665542000 11 1233445433212111
Q ss_pred cccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007 246 QLEVKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 246 ~~~~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
+...+.+.++..+ +|+|+||+.+...
T Consensus 104 ~~~~~~~~~~~~~---~DlVid~~Dn~~~ 129 (339)
T PRK07688 104 DVTAEELEELVTG---VDLIIDATDNFET 129 (339)
T ss_pred cCCHHHHHHHHcC---CCEEEEcCCCHHH
Confidence 1112344455443 9999999988655
No 399
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.69 E-value=0.063 Score=43.78 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=53.3
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-C-CeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHHHHHHhc
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-G-IHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKNVKGLLA 257 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~i~~~~~ 257 (288)
+...+++|++||.+|+ |.-+. +..+++.. + .+++++. .++.+ +..+...+ .+..+. ..+.+.+...
T Consensus 26 ~~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vD----is~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~ 95 (188)
T TIGR00438 26 KFKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVD----LQPMK----PIENVDFIRGDFTDEEVLNKIRERVG 95 (188)
T ss_pred HhcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEe----ccccc----cCCCceEEEeeCCChhHHHHHHHHhC
Confidence 3456799999999999 44444 34444443 3 4677775 34332 11233322 122221 1234444444
Q ss_pred CCCCccEEEE-C----CCc-------------ccHHHHHhhccCCCeeC
Q 023007 258 NLPEPALGFN-C----VGG-------------NSASKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d-~----~g~-------------~~~~~a~~~l~~~G~~v 288 (288)
+. ++|+|+. . .|. ..+..+.++|+|+|+++
T Consensus 96 ~~-~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 143 (188)
T TIGR00438 96 DD-KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFV 143 (188)
T ss_pred CC-CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 43 3999995 2 221 12377889999999985
No 400
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=95.66 E-value=0.031 Score=49.25 Aligned_cols=82 Identities=13% Similarity=0.121 Sum_probs=53.5
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH--------------------HHHHHhCCCCEEEeCCccc
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------------------KEKLKGLGADEVFTESQLE 248 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--------------------~~~~~~~g~~~v~~~~~~~ 248 (288)
..+|||.|+ |++|.=|++++.+.|+..+.++|.+.-.-.. ..+++.+...--++....+
T Consensus 66 ~s~VLVVGa-GGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~~ 144 (427)
T KOG2017|consen 66 NSSVLVVGA-GGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNEF 144 (427)
T ss_pred CccEEEEcc-CCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechhh
Confidence 368999999 9999999999999999988888765411111 1233444433222222221
Q ss_pred --HHHHHHHhcCCCCccEEEECCCcccH
Q 023007 249 --VKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 249 --~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
.....++.++ +|+|+||+-+..+
T Consensus 145 L~~sNa~~Ii~~---YdvVlDCTDN~~T 169 (427)
T KOG2017|consen 145 LSSSNAFDIIKQ---YDVVLDCTDNVPT 169 (427)
T ss_pred ccchhHHHHhhc---cceEEEcCCCccc
Confidence 2344444454 9999999988665
No 401
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.66 E-value=0.25 Score=36.52 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=55.3
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~ 271 (288)
|+|.|. |.+|...++.++..+.+++++. .++++.+.+++.|. .++..+..+.+.+++..-. +.+.++-++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid----~d~~~~~~~~~~~~-~~i~gd~~~~~~l~~a~i~--~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVID----RDPERVEELREEGV-EVIYGDATDPEVLERAGIE--KADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTS-EEEES-TTSHHHHHHTTGG--CESEEEEESSS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEE----CCcHHHHHHHhccc-ccccccchhhhHHhhcCcc--ccCEEEEccCC
Confidence 678899 9999999999999776888888 68888888888884 4555555555556554333 48888888887
Q ss_pred ccH
Q 023007 272 NSA 274 (288)
Q Consensus 272 ~~~ 274 (288)
+..
T Consensus 73 d~~ 75 (116)
T PF02254_consen 73 DEE 75 (116)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 402
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=95.62 E-value=0.032 Score=47.90 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=51.9
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g 270 (288)
+|||+|+||- |...+..+...|.+|++++. ++...+.+...|...+....-+ .+.+.++....+ +|+|||++.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~----t~~~~~~~~~~g~~~v~~g~l~-~~~l~~~l~~~~-i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVT----TSEGKHLYPIHQALTVHTGALD-PQELREFLKRHS-IDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEc----cCCccccccccCCceEEECCCC-HHHHHHHHHhcC-CCEEEEcCC
Confidence 6999999776 98888877788999999994 4555555556665555433322 234656555544 999999987
Q ss_pred c
Q 023007 271 G 271 (288)
Q Consensus 271 ~ 271 (288)
.
T Consensus 75 P 75 (256)
T TIGR00715 75 P 75 (256)
T ss_pred H
Confidence 5
No 403
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.62 E-value=0.1 Score=43.34 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=52.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++|+|.|+ |.+|..-++.+...|++|+++... .+++-.++ .+.|--..+ .++..... .. ++|+||-
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~--~~~~l~~l-~~~~~i~~~-~~~~~~~d----l~---~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE--LESELTLL-AEQGGITWL-ARCFDADI----LE---GAFLVIA 75 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC--CCHHHHHH-HHcCCEEEE-eCCCCHHH----hC---CcEEEEE
Confidence 4689999999 999999999999999999888643 23333333 333311111 12211111 12 3899999
Q ss_pred CCCcccH-HHHHhhccCCC
Q 023007 268 CVGGNSA-SKVLKFLRFRE 285 (288)
Q Consensus 268 ~~g~~~~-~~a~~~l~~~G 285 (288)
+++.+.. .......+..|
T Consensus 76 at~d~~ln~~i~~~a~~~~ 94 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARG 94 (205)
T ss_pred CCCCHHHHHHHHHHHHHcC
Confidence 9998755 33333333333
No 404
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.61 E-value=0.1 Score=44.48 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=28.9
Q ss_pred CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|+++ ++|...+..+...|++|+++.+
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r 39 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYW 39 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcC
Confidence 458899999984 8999988888888999998874
No 405
>PRK08328 hypothetical protein; Provisional
Probab=95.61 E-value=0.078 Score=44.89 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=29.5
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
+.+|+|.|+ |++|..+++.+.+.|..-+.++|.+
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 378999999 9999999999999999877777644
No 406
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.61 E-value=0.35 Score=39.98 Aligned_cols=47 Identities=21% Similarity=0.207 Sum_probs=37.2
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGA 238 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~ 238 (288)
-.|++++|+|. |.+|..+++.+...|++|+++. .++++.+.+. .+|.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D----~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVAD----INEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHcCC
Confidence 46789999999 8999999999999999999665 4566655543 4454
No 407
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=95.58 E-value=0.14 Score=45.65 Aligned_cols=80 Identities=9% Similarity=0.069 Sum_probs=46.6
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-C-EEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-D-EVFTESQLEVKNVKGLLANLPEPALGFNC 268 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-~-~v~~~~~~~~~~i~~~~~~~g~~D~v~d~ 268 (288)
+|+|+|++|.+|...+..+...|.+|+++.+...........+.+++. . .++..+-.+.+.+....... ++|+||++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vvh~ 80 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDTVIHF 80 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCEEEEC
Confidence 589999999999999988888899999875321111221222223321 1 12222222223444433332 39999999
Q ss_pred CCc
Q 023007 269 VGG 271 (288)
Q Consensus 269 ~g~ 271 (288)
.+.
T Consensus 81 a~~ 83 (338)
T PRK10675 81 AGL 83 (338)
T ss_pred Ccc
Confidence 864
No 408
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.58 E-value=0.09 Score=45.59 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=34.9
Q ss_pred HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE 231 (288)
Q Consensus 179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~ 231 (288)
++.+.....++++++|+|+ |++|.+++..+...|++++++. +++++.+
T Consensus 107 ~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~----R~~~~~~ 154 (270)
T TIGR00507 107 DLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIAN----RTVSKAE 154 (270)
T ss_pred HHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEe----CCHHHHH
Confidence 3433233456789999999 8999998888888899888776 3455543
No 409
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.55 E-value=0.15 Score=46.61 Aligned_cols=86 Identities=19% Similarity=0.264 Sum_probs=57.5
Q ss_pred HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCcccHHHHHH
Q 023007 176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKG 254 (288)
Q Consensus 176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~i~~ 254 (288)
|..-..+...--.++++||+|+ |-+|..++..+...|.+.+.++. ++.++. ++++++|...+ .++.+..
T Consensus 165 Av~lA~~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaN---RT~erA~~La~~~~~~~~------~l~el~~ 234 (414)
T COG0373 165 AVELAKRIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIAN---RTLERAEELAKKLGAEAV------ALEELLE 234 (414)
T ss_pred HHHHHHHHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEc---CCHHHHHHHHHHhCCeee------cHHHHHH
Confidence 4433334334346789999999 99999999999999975555542 455554 45678884322 1234444
Q ss_pred HhcCCCCccEEEECCCcccH
Q 023007 255 LLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 255 ~~~~~g~~D~v~d~~g~~~~ 274 (288)
..+. +|+||.++|.+..
T Consensus 235 ~l~~---~DvVissTsa~~~ 251 (414)
T COG0373 235 ALAE---ADVVISSTSAPHP 251 (414)
T ss_pred hhhh---CCEEEEecCCCcc
Confidence 4443 9999999998653
No 410
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.54 E-value=0.086 Score=51.86 Aligned_cols=80 Identities=16% Similarity=0.135 Sum_probs=49.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-Hh----CCCCE--EE--eCCc-ccHHH-HHHHh
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG----LGADE--VF--TESQ-LEVKN-VKGLL 256 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~----~g~~~--v~--~~~~-~~~~~-i~~~~ 256 (288)
.++++||+|++|++|.+.++.+...|++|+++.+ +.++.+.+ .+ .+... .+ |-.+ ..++. +.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r----~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL----NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC----CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4789999999999999999888888999999884 44443322 11 23221 11 2111 11222 22222
Q ss_pred cCCCCccEEEECCCc
Q 023007 257 ANLPEPALGFNCVGG 271 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~ 271 (288)
...|++|++|+|.|.
T Consensus 489 ~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 489 LAYGGVDIVVNNAGI 503 (676)
T ss_pred HhcCCCcEEEECCCC
Confidence 233459999999984
No 411
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.52 E-value=0.079 Score=46.34 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=31.9
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL 233 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~ 233 (288)
..+++|+|+|+ |+.|.+++..+...|++ ++++. .+.++.+.+
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~n----R~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFD----VDPARAAAL 167 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHH
Confidence 35689999999 99999999999999985 54554 455555433
No 412
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.52 E-value=0.094 Score=44.82 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=30.2
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~ 224 (288)
..+|+|.|+ |++|..++..+.+.|...+.++|.+.
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 379999999 99999999999999998777776554
No 413
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.52 E-value=0.14 Score=43.59 Aligned_cols=34 Identities=12% Similarity=0.185 Sum_probs=29.8
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~ 224 (288)
.+|+|.|+ |++|..+++.+.+.|...+.++|.+.
T Consensus 25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 78999999 99999999999999998777776544
No 414
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.52 E-value=0.1 Score=42.68 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=55.3
Q ss_pred CCCCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007 185 TLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLANL 259 (288)
Q Consensus 185 ~~~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~~~~~ 259 (288)
.++++.+||-.|+ +.|..++.+++. .+++|+++. .+++..+.+ ++.+.+.+ .....+...+ ...
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD----~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~~~---~~~- 110 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVD----SLGKKIAFLREVAAELGLKNV-TVVHGRAEEF---GQE- 110 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEe----CcHHHHHHHHHHHHHcCCCCE-EEEeccHhhC---CCC-
Confidence 3556899999988 334555555554 467888886 466665554 34555432 1111112222 222
Q ss_pred CCccEEEECCCc---ccHHHHHhhccCCCeeC
Q 023007 260 PEPALGFNCVGG---NSASKVLKFLRFREEQW 288 (288)
Q Consensus 260 g~~D~v~d~~g~---~~~~~a~~~l~~~G~~v 288 (288)
+.+|+|+-.... ..+..+.++|+|+|+++
T Consensus 111 ~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv 142 (187)
T PRK00107 111 EKFDVVTSRAVASLSDLVELCLPLLKPGGRFL 142 (187)
T ss_pred CCccEEEEccccCHHHHHHHHHHhcCCCeEEE
Confidence 259998875433 22377889999999985
No 415
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.51 E-value=0.08 Score=46.38 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=44.8
Q ss_pred eEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhCC---CCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007 191 SIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEPALG 265 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~i~~~~~~~g~~D~v 265 (288)
+|+|+|++|.+|...++.+...| .+|+++.+.. ...+.+.+..+. --.++..+-.+.+.+.++..+.. +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLT--YAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQ-PDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCC--cchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcC-CCEE
Confidence 58999999999999999887766 6787765321 111112222221 11222222222344555444433 9999
Q ss_pred EECCCc
Q 023007 266 FNCVGG 271 (288)
Q Consensus 266 ~d~~g~ 271 (288)
|+|.+.
T Consensus 78 i~~a~~ 83 (317)
T TIGR01181 78 VHFAAE 83 (317)
T ss_pred EEcccc
Confidence 999975
No 416
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.50 E-value=0.093 Score=44.38 Aligned_cols=82 Identities=13% Similarity=0.196 Sum_probs=50.7
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH--------------------HHHHHhCCCCEEEeCCccc-
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------------------KEKLKGLGADEVFTESQLE- 248 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--------------------~~~~~~~g~~~v~~~~~~~- 248 (288)
.+|+|.|. |++|..+++.+.+.|..-+.++|.+.-.+.. .+.++++..+.-+.....+
T Consensus 12 ~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i 90 (231)
T cd00755 12 AHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFL 90 (231)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 68999999 9999999999999999877777655322211 1222333333222221111
Q ss_pred -HHHHHHHhcCCCCccEEEECCCcccH
Q 023007 249 -VKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 249 -~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
.+...++... ++|+|+||..+...
T Consensus 91 ~~~~~~~l~~~--~~D~VvdaiD~~~~ 115 (231)
T cd00755 91 TPDNSEDLLGG--DPDFVVDAIDSIRA 115 (231)
T ss_pred CHhHHHHHhcC--CCCEEEEcCCCHHH
Confidence 1334444433 49999999987554
No 417
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.079 Score=44.33 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=31.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
++++++|+|++|++|...++.+...|++|+.+.+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999854
No 418
>PRK07069 short chain dehydrogenase; Validated
Probab=95.46 E-value=0.057 Score=45.70 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=27.8
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+++|+|++|++|...++.+...|++|+++.+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r 31 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDI 31 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 3899999999999988888888999998885
No 419
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.45 E-value=0.095 Score=46.89 Aligned_cols=81 Identities=14% Similarity=0.231 Sum_probs=48.1
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-CHHHHHHHH-hC----CCC-EEEeCCcccHHHHHHHhcCCCCc
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLK-GL----GAD-EVFTESQLEVKNVKGLLANLPEP 262 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~-~~----g~~-~v~~~~~~~~~~i~~~~~~~g~~ 262 (288)
++|||+|++|.+|...++.+...|.+|+++.+.... ..++.+.+. .. +.. .++..+-.+.+.+.+...+.+ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK-P 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC-C
Confidence 479999999999999999999999999998753210 012222211 11 110 111111112334555444433 8
Q ss_pred cEEEECCCc
Q 023007 263 ALGFNCVGG 271 (288)
Q Consensus 263 D~v~d~~g~ 271 (288)
|+||.+++.
T Consensus 80 d~ViH~Aa~ 88 (343)
T TIGR01472 80 TEIYNLAAQ 88 (343)
T ss_pred CEEEECCcc
Confidence 999999874
No 420
>PLN02366 spermidine synthase
Probab=95.45 E-value=0.14 Score=45.24 Aligned_cols=95 Identities=16% Similarity=0.046 Sum_probs=53.4
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCC-EEE-eCC-----cccHHHHHHHhcC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF-TES-----QLEVKNVKGLLAN 258 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~-~v~-~~~-----~~~~~~i~~~~~~ 258 (288)
...++||++|+ |. |..+..++++.+...+.+++ .+++-.+.+++ +... ..+ +.+ .+..+.+.+..++
T Consensus 90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VE---iD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~ 164 (308)
T PLN02366 90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICE---IDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEG 164 (308)
T ss_pred CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEE---CCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCC
Confidence 45689999999 44 66777888876665444444 35665666654 2110 001 111 1111223332222
Q ss_pred CCCccEEEECCCc-----------ccHHHHHhhccCCCeeC
Q 023007 259 LPEPALGFNCVGG-----------NSASKVLKFLRFREEQW 288 (288)
Q Consensus 259 ~g~~D~v~d~~g~-----------~~~~~a~~~l~~~G~~v 288 (288)
++|+||--... +.++.+.++|+++|.++
T Consensus 165 --~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv 203 (308)
T PLN02366 165 --TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVC 203 (308)
T ss_pred --CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEE
Confidence 49987764332 22477889999999984
No 421
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.43 E-value=0.044 Score=43.46 Aligned_cols=79 Identities=10% Similarity=0.124 Sum_probs=49.3
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++|+|.|+ |.+|..-++.+...|++|+++.. +..+.+.+++.-. +..+..... +..+.|+||-
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp------~~~~~l~~l~~i~-~~~~~~~~~-------dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP------EICKEMKELPYIT-WKQKTFSND-------DIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC------ccCHHHHhccCcE-EEecccChh-------cCCCceEEEE
Confidence 5689999999 99999988888889999998842 1222233343211 111111101 1113899999
Q ss_pred CCCcccHHHHHhhc
Q 023007 268 CVGGNSASKVLKFL 281 (288)
Q Consensus 268 ~~g~~~~~~a~~~l 281 (288)
+++++..+..+...
T Consensus 77 aT~d~e~N~~i~~~ 90 (157)
T PRK06719 77 ATNQHAVNMMVKQA 90 (157)
T ss_pred CCCCHHHHHHHHHH
Confidence 99988875555433
No 422
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.42 E-value=0.064 Score=44.98 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+++++|+|++|++|...+..+...|++|+++.+
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r 37 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDK 37 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4679999999999999999888888999998874
No 423
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.41 E-value=0.039 Score=46.19 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=47.3
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~v~d~~g 270 (288)
|||+|++|-+|...+..+...|.+|+.+.+.. .++.. .........+ .|.. +.+.+.++..... +|.||.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~-~~~~~~~~~~~~dl~--~~~~~~~~~~~~~-~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSS--NSESF-EEKKLNVEFVIGDLT--DKEQLEKLLEKAN-IDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCS--TGGHH-HHHHTTEEEEESETT--SHHHHHHHHHHHT-ESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccc--ccccc-ccccceEEEEEeecc--ccccccccccccC-ceEEEEeec
Confidence 79999999999999999999999999888542 22211 1122222211 2222 2234444433323 899999988
Q ss_pred cc
Q 023007 271 GN 272 (288)
Q Consensus 271 ~~ 272 (288)
..
T Consensus 75 ~~ 76 (236)
T PF01370_consen 75 FS 76 (236)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 424
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.37 E-value=0.072 Score=46.52 Aligned_cols=76 Identities=9% Similarity=-0.059 Sum_probs=46.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH-HhCCCC-EEEeCCcccHHHHHHHhcCCCCccE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNVKGLLANLPEPAL 264 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~ 264 (288)
++++++|+|+ |+.+.+++..+...|++ ++++. ++.++.+.+ ++++.. .+.... ..+.+..... .+|+
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~n----Rt~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~---~~Di 193 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVIN----RNPDKLSRLVDLGVQVGVITRLE--GDSGGLAIEK---AAEV 193 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHHhhhcCcceecc--chhhhhhccc---CCCE
Confidence 5789999999 99999999999999985 55665 456665544 344321 111000 0011111112 3899
Q ss_pred EEECCCccc
Q 023007 265 GFNCVGGNS 273 (288)
Q Consensus 265 v~d~~g~~~ 273 (288)
||+|++...
T Consensus 194 VInaTp~g~ 202 (282)
T TIGR01809 194 LVSTVPADV 202 (282)
T ss_pred EEECCCCCC
Confidence 999987543
No 425
>PLN02583 cinnamoyl-CoA reductase
Probab=95.34 E-value=0.19 Score=44.03 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=31.6
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.++++|+|+|++|.+|...++.+...|++|+++.+
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R 38 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQ 38 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 35679999999999999999999999999999885
No 426
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.34 E-value=0.16 Score=43.95 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=29.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
.+.+|+|.|+ |++|..++..+.+.|..-+.++|.+
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3478999999 9999999999999997666666544
No 427
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.32 E-value=0.13 Score=44.98 Aligned_cols=60 Identities=22% Similarity=0.392 Sum_probs=52.2
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 245 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~ 245 (288)
+.++||. .+|-+.+|.+|.+.+.+|+.+|++++++.... .+.++.+.++.+|+.-+....
T Consensus 57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~-~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPET-MSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEcCC
Confidence 6799998 55678889999999999999999999998654 689999999999998887665
No 428
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.28 E-value=0.1 Score=42.06 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=26.8
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
+|+|.|+ |++|...++.+.+.|..-+.++|.+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D 32 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFD 32 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4899999 9999999999999999766666554
No 429
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.27 E-value=0.12 Score=46.81 Aligned_cols=81 Identities=19% Similarity=0.143 Sum_probs=50.8
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH----------------HH----HHHHHhCCCCEEEeCCcc--
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD----------------EA----KEKLKGLGADEVFTESQL-- 247 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~----------------~~----~~~~~~~g~~~v~~~~~~-- 247 (288)
.+|+|.|+ |++|..+++.+...|..-+.++|.+.-.. .| .+.++++..+--+.....
T Consensus 29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i 107 (355)
T PRK05597 29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL 107 (355)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence 79999999 99999999999999998887776543111 11 123344444322222111
Q ss_pred cHHHHHHHhcCCCCccEEEECCCcccH
Q 023007 248 EVKNVKGLLANLPEPALGFNCVGGNSA 274 (288)
Q Consensus 248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~ 274 (288)
..+...++.. ++|+|+||+.+...
T Consensus 108 ~~~~~~~~~~---~~DvVvd~~d~~~~ 131 (355)
T PRK05597 108 TWSNALDELR---DADVILDGSDNFDT 131 (355)
T ss_pred CHHHHHHHHh---CCCEEEECCCCHHH
Confidence 1123334443 39999999987554
No 430
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.24 E-value=0.16 Score=44.51 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=78.0
Q ss_pred CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH--HHHhhcCCCCCCeEEEeCCCChHHH
Q 023007 126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR--MLEDFTTLNSGDSIVQNGATSIVGQ 203 (288)
Q Consensus 126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~--~l~~~~~~~~g~~vlI~g~~g~vG~ 203 (288)
-.+.|++++..+ .|.+|..-.....+++.+++.|- ......|+++ ++.+ .+++|++|+=.|+ +.|.
T Consensus 108 P~rig~~f~I~P----sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvGc--GSGI 175 (300)
T COG2264 108 PVRIGERFVIVP----SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVGC--GSGI 175 (300)
T ss_pred cEEeeeeEEECC----CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEecC--ChhH
Confidence 366788888765 55665333346677887777553 3333444432 3332 3568999998887 4566
Q ss_pred HHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc----ccH
Q 023007 204 CIIQIARHRGIH-SINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG----NSA 274 (288)
Q Consensus 204 ~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~----~~~ 274 (288)
++|..++. |+. ++++ |. ++...+..+ .-+.... .....+ .......++ ++|+|+-+.=- ...
T Consensus 176 LaIAa~kL-GA~~v~g~-Di---Dp~AV~aa~eNa~~N~v~~~-~~~~~~-~~~~~~~~~--~~DvIVANILA~vl~~La 246 (300)
T COG2264 176 LAIAAAKL-GAKKVVGV-DI---DPQAVEAARENARLNGVELL-VQAKGF-LLLEVPENG--PFDVIVANILAEVLVELA 246 (300)
T ss_pred HHHHHHHc-CCceEEEe-cC---CHHHHHHHHHHHHHcCCchh-hhcccc-cchhhcccC--cccEEEehhhHHHHHHHH
Confidence 66665554 776 5555 43 444444433 2333320 000000 011111122 59999877532 222
Q ss_pred HHHHhhccCCCeeC
Q 023007 275 SKVLKFLRFREEQW 288 (288)
Q Consensus 275 ~~a~~~l~~~G~~v 288 (288)
....++++|+|+++
T Consensus 247 ~~~~~~lkpgg~lI 260 (300)
T COG2264 247 PDIKRLLKPGGRLI 260 (300)
T ss_pred HHHHHHcCCCceEE
Confidence 67788999999874
No 431
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=95.24 E-value=0.12 Score=46.30 Aligned_cols=80 Identities=6% Similarity=0.133 Sum_probs=45.7
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC--CCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
++|||+|++|.+|...++.+...|.+++++.+... .......+..+ +.. .++..+-.+.+.+.+...+. ++|+||
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~Vi 79 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-QPDCVM 79 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc-cccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-CCCEEE
Confidence 47999999999999999999999988766654211 11111111111 111 11211111223444444333 399999
Q ss_pred ECCCc
Q 023007 267 NCVGG 271 (288)
Q Consensus 267 d~~g~ 271 (288)
+|.+.
T Consensus 80 h~A~~ 84 (355)
T PRK10217 80 HLAAE 84 (355)
T ss_pred ECCcc
Confidence 99874
No 432
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.20 E-value=0.051 Score=44.77 Aligned_cols=92 Identities=10% Similarity=0.057 Sum_probs=54.7
Q ss_pred cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHHHhcCC
Q 023007 184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANL 259 (288)
Q Consensus 184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~~~~~~ 259 (288)
....++.+||-.|+ +.|..+..+++. |.+|+++. .+++..+.++ ..+...+. ....+ +....-.
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD----~S~~~i~~a~~~~~~~~~~~v~-~~~~d---~~~~~~~- 93 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWD----KNPMSIANLERIKAAENLDNLH-TAVVD---LNNLTFD- 93 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEe----CCHHHHHHHHHHHHHcCCCcce-EEecC---hhhCCcC-
Confidence 44556789999988 447777778775 88998886 5676665554 23332111 11111 1111111
Q ss_pred CCccEEEECCCc---------ccHHHHHhhccCCCee
Q 023007 260 PEPALGFNCVGG---------NSASKVLKFLRFREEQ 287 (288)
Q Consensus 260 g~~D~v~d~~g~---------~~~~~a~~~l~~~G~~ 287 (288)
+.+|+|+.+..- ..+....+.|+|+|.+
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~ 130 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYN 130 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEE
Confidence 149999876431 1226677899999984
No 433
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.18 E-value=0.21 Score=42.06 Aligned_cols=83 Identities=19% Similarity=0.252 Sum_probs=59.5
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 268 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~ 268 (288)
+++|.|+ |.+|...++.+...|..|+.+. .++++.+. +. +++ .+++..+..+.+.++++--. .+|+++=+
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id----~d~~~~~~~~~~~~~-~~~v~gd~t~~~~L~~agi~--~aD~vva~ 73 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLID----RDEERVEEFLADELD-THVVIGDATDEDVLEEAGID--DADAVVAA 73 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEE----cCHHHHHHHhhhhcc-eEEEEecCCCHHHHHhcCCC--cCCEEEEe
Confidence 5789999 9999999999999999999998 56777665 33 244 34555555554555554222 49999999
Q ss_pred CCcccHHHHHhhc
Q 023007 269 VGGNSASKVLKFL 281 (288)
Q Consensus 269 ~g~~~~~~a~~~l 281 (288)
+|++..+..+-++
T Consensus 74 t~~d~~N~i~~~l 86 (225)
T COG0569 74 TGNDEVNSVLALL 86 (225)
T ss_pred eCCCHHHHHHHHH
Confidence 9987765544433
No 434
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.16 E-value=0.19 Score=43.00 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
-+|.+|+|.|- |.+|+.+++++..+|++++.+++
T Consensus 36 l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGS-GNVAQYAAEKLLELGAKVVTLSD 69 (254)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 46889999999 99999999999999999998885
No 435
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.15 E-value=0.17 Score=44.00 Aligned_cols=42 Identities=21% Similarity=0.164 Sum_probs=33.5
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHH
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL 233 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~ 233 (288)
..+++++|+|+ |++|.+++..+...| .+++++. ++.++.+.+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~----R~~~~a~~l 163 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVN----RTVERAEEL 163 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHH
Confidence 45689999998 999999999999999 5777777 456665444
No 436
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.14 E-value=0.067 Score=52.47 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=53.2
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-----------------CHHHHHHHHhCCCCEEEeCCc---
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-----------------SDEAKEKLKGLGADEVFTESQ--- 246 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~g~~~v~~~~~--- 246 (288)
..|++|+|+|+ |+.|+.++..+...|++|+++.+.+.. -+...+.++++|.+...+..-
T Consensus 325 ~~~~~VaIIGa-GpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGA-GPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 35889999999 999999999999999998888643210 012345667788765444321
Q ss_pred ccHHHHHHHhcCCCCccEEEECCCcc
Q 023007 247 LEVKNVKGLLANLPEPALGFNCVGGN 272 (288)
Q Consensus 247 ~~~~~i~~~~~~~g~~D~v~d~~g~~ 272 (288)
..++.+ .. ++|.||.++|..
T Consensus 404 i~~~~~---~~---~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESL---LE---DYDAVFVGVGTY 423 (654)
T ss_pred CCHHHH---Hh---cCCEEEEeCCCC
Confidence 112222 22 399999999863
No 437
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.13 E-value=0.39 Score=40.46 Aligned_cols=97 Identities=15% Similarity=0.102 Sum_probs=55.2
Q ss_pred HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe---EEEEEcCC---CCC-----HHHHHHHHhCCCCEEEeCCcc
Q 023007 179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH---SINIIRDR---AGS-----DEAKEKLKGLGADEVFTESQL 247 (288)
Q Consensus 179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~---vi~~~~~~---~~~-----~~~~~~~~~~g~~~v~~~~~~ 247 (288)
+++....--++.+++|+|+ |+.|..++..+...|++ ++++.+.. ... +.+.++++.++... .. .
T Consensus 15 al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~ 89 (226)
T cd05311 15 ALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---G 89 (226)
T ss_pred HHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---C
Confidence 4444333345689999999 99999999988889986 54554331 111 12234445544221 11 1
Q ss_pred cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCe
Q 023007 248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREE 286 (288)
Q Consensus 248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~ 286 (288)
.+. +... ++|++|++++...+ ...++.+.++..
T Consensus 90 ~l~---~~l~---~~dvlIgaT~~G~~~~~~l~~m~~~~i 123 (226)
T cd05311 90 TLK---EALK---GADVFIGVSRPGVVKKEMIKKMAKDPI 123 (226)
T ss_pred CHH---HHHh---cCCEEEeCCCCCCCCHHHHHhhCCCCE
Confidence 111 1112 38999999975444 555666655543
No 438
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.07 E-value=0.11 Score=47.14 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=32.4
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+..+++|||+|++|-+|...+..+...|.+|+++.+
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 346789999999999999999999999999999874
No 439
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.07 E-value=0.5 Score=38.71 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=55.5
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHH
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNV 252 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i 252 (288)
+.....++++++|+=.|+ +.|..++.+++.. +.+++++. .+++..+.++ +++.+.+ +..+.. +.+
T Consensus 32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD----~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~ 103 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIE----RDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECL 103 (196)
T ss_pred HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHhCCCCeEEEECchH--HHH
Confidence 344467788888877776 4455566666554 56888887 5677766554 4555432 222111 112
Q ss_pred HHHhcCCCCccE-EEECCCc--ccHHHHHhhccCCCeeC
Q 023007 253 KGLLANLPEPAL-GFNCVGG--NSASKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~~g~~D~-v~d~~g~--~~~~~a~~~l~~~G~~v 288 (288)
..+.. ..|. +++.... ..++.+.+.|+|+|+++
T Consensus 104 ~~~~~---~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li 139 (196)
T PRK07402 104 AQLAP---APDRVCIEGGRPIKEILQAVWQYLKPGGRLV 139 (196)
T ss_pred hhCCC---CCCEEEEECCcCHHHHHHHHHHhcCCCeEEE
Confidence 12111 2444 4443222 22488889999999974
No 440
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.06 E-value=0.1 Score=48.69 Aligned_cols=77 Identities=22% Similarity=0.237 Sum_probs=48.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
.+++|+|+|+ |.+|+.++..+...|++|+++..... ..++..+.+.+.|...+.. +..+ +..+ ++|+||
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~-~~~~-----~~~~---~~d~vv 73 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLG-EYPE-----EFLE---GVDLVV 73 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeC-Ccch-----hHhh---cCCEEE
Confidence 4689999999 77999999999999999998874310 0011123445556542222 1111 1111 499999
Q ss_pred ECCCcccH
Q 023007 267 NCVGGNSA 274 (288)
Q Consensus 267 d~~g~~~~ 274 (288)
.+.|....
T Consensus 74 ~~~g~~~~ 81 (450)
T PRK14106 74 VSPGVPLD 81 (450)
T ss_pred ECCCCCCC
Confidence 99986544
No 441
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.05 E-value=0.14 Score=42.88 Aligned_cols=99 Identities=17% Similarity=0.110 Sum_probs=63.4
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH----HhCCCCEEEe-CC-cccHHHHH
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFT-ES-QLEVKNVK 253 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~-~~-~~~~~~i~ 253 (288)
.....++.++||=+|. .+|..++++|..+. .+++.+. .++++.+.+ ++.|.+..+. .. .+..+.+.
T Consensus 53 ~L~~~~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE----~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~ 126 (219)
T COG4122 53 LLARLSGPKRILEIGT--AIGYSALWMALALPDDGRLTTIE----RDEERAEIARENLAEAGVDDRIELLLGGDALDVLS 126 (219)
T ss_pred HHHHhcCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEe----CCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHH
Confidence 3455677788888876 67888888888876 4455554 467776555 5678765322 22 12234444
Q ss_pred HHhcCCCCccEEE-ECCCc---ccHHHHHhhccCCCeeC
Q 023007 254 GLLANLPEPALGF-NCVGG---NSASKVLKFLRFREEQW 288 (288)
Q Consensus 254 ~~~~~~g~~D~v~-d~~g~---~~~~~a~~~l~~~G~~v 288 (288)
.... +.||+|| |+.-. +.++.++++|++||.+|
T Consensus 127 ~~~~--~~fDliFIDadK~~yp~~le~~~~lLr~GGliv 163 (219)
T COG4122 127 RLLD--GSFDLVFIDADKADYPEYLERALPLLRPGGLIV 163 (219)
T ss_pred hccC--CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEE
Confidence 4222 3599765 55543 33499999999999875
No 442
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.05 E-value=0.072 Score=46.98 Aligned_cols=73 Identities=18% Similarity=0.330 Sum_probs=47.4
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g 270 (288)
+|+|+|++|.+|...++.+...|.+|+++.+. +++...+...+...+ ..+-.+.+.+.+...+ +|+||++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~-~~D~~~~~~l~~~~~~---~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP----TSDRRNLEGLDVEIV-EGDLRDPASLRKAVAG---CRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEec----CccccccccCCceEE-EeeCCCHHHHHHHHhC---CCEEEEece
Confidence 69999999999999999999999999999853 222222222333322 1121223445554443 899999886
Q ss_pred c
Q 023007 271 G 271 (288)
Q Consensus 271 ~ 271 (288)
.
T Consensus 74 ~ 74 (328)
T TIGR03466 74 D 74 (328)
T ss_pred e
Confidence 3
No 443
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.03 E-value=0.13 Score=46.82 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=29.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
.+.+|+|.|+ |++|..++..+.+.|..-+.++|.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4578999999 9999999999999999777777654
No 444
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.03 E-value=0.085 Score=40.52 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=29.2
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~ 224 (288)
..+|+|.|+ |++|...+..+.+.|...+.++|.+.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcc
Confidence 468999999 99999999999999998777776554
No 445
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.02 E-value=0.12 Score=42.95 Aligned_cols=96 Identities=15% Similarity=0.050 Sum_probs=55.0
Q ss_pred hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHHhc
Q 023007 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLA 257 (288)
Q Consensus 182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~~~ 257 (288)
...+++++++||=.|+ +.|..+..+++.. .+++.+. .+++..+.+ ++.+.+.+-....+..+. +..
T Consensus 72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~~ 141 (212)
T PRK00312 72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVE----RIKTLQWEAKRRLKQLGLHNVSVRHGDGWKG---WPA 141 (212)
T ss_pred HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEe----CCHHHHHHHHHHHHHCCCCceEEEECCcccC---CCc
Confidence 3467889999999988 3355555555553 4777776 355555444 345544321111110010 111
Q ss_pred CCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007 258 NLPEPALGFNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 258 ~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
.+.+|+|+-...-... ....+.|+++|+++
T Consensus 142 -~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv 172 (212)
T PRK00312 142 -YAPFDRILVTAAAPEIPRALLEQLKEGGILV 172 (212)
T ss_pred -CCCcCEEEEccCchhhhHHHHHhcCCCcEEE
Confidence 1249987765544444 77789999999974
No 446
>PLN02928 oxidoreductase family protein
Probab=95.01 E-value=0.097 Score=47.16 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=30.4
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.|+++.|+|. |.+|..+++.++.+|++|+++.+
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr 190 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRR 190 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECC
Confidence 5789999999 99999999999999999998863
No 447
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.00 E-value=0.23 Score=42.33 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=28.9
Q ss_pred CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEE
Q 023007 188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~ 220 (288)
+|++++|+|+++ ++|...+..+...|++|+++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 578999999974 899999988889999998874
No 448
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=94.99 E-value=0.41 Score=44.41 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=32.3
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
-+|++|+|.|. |.+|+.+++.+...|++|++++|.
T Consensus 235 l~Gk~VaVqG~-GnVg~~aa~~L~e~GakVVavSD~ 269 (454)
T PTZ00079 235 LEGKTVVVSGS-GNVAQYAVEKLLQLGAKVLTMSDS 269 (454)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47899999999 999999999999999999988864
No 449
>PRK01581 speE spermidine synthase; Validated
Probab=94.97 E-value=0.29 Score=44.09 Aligned_cols=93 Identities=5% Similarity=0.014 Sum_probs=53.1
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC-CCE----EE-eCCc----cc-HHHHHHHh
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADE----VF-TESQ----LE-VKNVKGLL 256 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-~~~----v~-~~~~----~~-~~~i~~~~ 256 (288)
..++|||+|+ +.|.++..+++..+...+..++ .+++-.+.++++. ... .+ +.+- .+ .+.+.. +
T Consensus 150 ~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VE---IDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~ 223 (374)
T PRK01581 150 DPKRVLILGG--GDGLALREVLKYETVLHVDLVD---LDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-P 223 (374)
T ss_pred CCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEe---CCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-c
Confidence 3479999997 4566777788766554444444 4777788877521 100 01 1111 11 122322 2
Q ss_pred cCCCCccEEEECCCcc------------cHHHHHhhccCCCeeC
Q 023007 257 ANLPEPALGFNCVGGN------------SASKVLKFLRFREEQW 288 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~~------------~~~~a~~~l~~~G~~v 288 (288)
++ ++|+||--...+ .+..+.+.|+|+|.||
T Consensus 224 ~~--~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V 265 (374)
T PRK01581 224 SS--LYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFV 265 (374)
T ss_pred CC--CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEE
Confidence 22 599876543221 3377889999999975
No 450
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.96 E-value=0.36 Score=42.16 Aligned_cols=43 Identities=23% Similarity=0.307 Sum_probs=31.6
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL 233 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~ 233 (288)
..+++++|+|+ |+.+.+++..+...|++.+.++. ++.++.+.+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~n---R~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVAD---LDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEc---CCHHHHHHH
Confidence 34789999999 99999988888889985544442 455555444
No 451
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.95 E-value=0.17 Score=41.75 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=27.8
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
.+|+|.|+ |++|...++.+.+.|..-+.++|.+
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 68999999 9999999999999999655555554
No 452
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.94 E-value=0.12 Score=45.07 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=33.6
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL 233 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~ 233 (288)
..+|++++|.|+ |+.+.+++..+...|+ +++++. ++.++.+.+
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~N----Rt~~ra~~L 166 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVN----RTRERAEEL 166 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHH
Confidence 446899999999 9999999999999997 566666 455555444
No 453
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=94.90 E-value=0.22 Score=44.60 Aligned_cols=74 Identities=7% Similarity=0.025 Sum_probs=43.7
Q ss_pred CeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEE
Q 023007 190 DSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d 267 (288)
.+|||+|++|-+|...++.+... |.+|+++.+ +.++...+....--.++..+-. +.+.+.++.. ++|+||.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~d~ViH 74 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM----QTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK---KCDVILP 74 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC----cHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc---CCCEEEE
Confidence 36999999999999988888765 689998873 3333322211111122221111 1223333333 3999999
Q ss_pred CCC
Q 023007 268 CVG 270 (288)
Q Consensus 268 ~~g 270 (288)
|.+
T Consensus 75 ~aa 77 (347)
T PRK11908 75 LVA 77 (347)
T ss_pred Ccc
Confidence 865
No 454
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.87 E-value=0.15 Score=47.41 Aligned_cols=77 Identities=10% Similarity=0.060 Sum_probs=49.8
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++++|+|+ |.+|++++.++...|++|++............+.+++.|.......+.. .+. .. .+|+||.
T Consensus 4 ~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~---~~--~~d~vV~ 74 (447)
T PRK02472 4 QNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPL---ELL---DE--DFDLMVK 74 (447)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCH---HHh---cC--cCCEEEE
Confidence 4688999999 6699999999999999999885332112233345566676543322221 111 11 2899999
Q ss_pred CCCccc
Q 023007 268 CVGGNS 273 (288)
Q Consensus 268 ~~g~~~ 273 (288)
+.|-+.
T Consensus 75 s~gi~~ 80 (447)
T PRK02472 75 NPGIPY 80 (447)
T ss_pred CCCCCC
Confidence 887544
No 455
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.86 E-value=0.11 Score=39.21 Aligned_cols=87 Identities=10% Similarity=0.229 Sum_probs=47.7
Q ss_pred eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHh--CCCCEE-EeCCcccHHHHHHHhcCCCCccEEE
Q 023007 191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG--LGADEV-FTESQLEVKNVKGLLANLPEPALGF 266 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~--~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~v~ 266 (288)
+|.|+|++|-+|...++++... .++++.++.......++...... .+...+ +.. ...+.+ . ++|+||
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~----~---~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEEL----S---DVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHH----T---TESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHh----h---cCCEEE
Confidence 5899999999999988888875 45766666432111122222211 112211 211 111222 2 499999
Q ss_pred ECCCcccH-HHHHhhccCCCe
Q 023007 267 NCVGGNSA-SKVLKFLRFREE 286 (288)
Q Consensus 267 d~~g~~~~-~~a~~~l~~~G~ 286 (288)
.|++.... +.+-++++++-+
T Consensus 72 ~a~~~~~~~~~~~~~~~~g~~ 92 (121)
T PF01118_consen 72 LALPHGASKELAPKLLKAGIK 92 (121)
T ss_dssp E-SCHHHHHHHHHHHHHTTSE
T ss_pred ecCchhHHHHHHHHHhhCCcE
Confidence 99998877 444444454433
No 456
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.84 E-value=0.17 Score=46.03 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=29.3
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
..+|+|.|+ |++|..++..+.+.|...+.++|.+
T Consensus 41 ~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 468999999 9999999999999999777776654
No 457
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.84 E-value=0.32 Score=42.59 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=26.0
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIR 221 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~ 221 (288)
-++++++|+|+ |+.+.+++..+...|+ +++++.+
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nR 156 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNR 156 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC
Confidence 36689999999 8888887777777898 5555554
No 458
>PLN03075 nicotianamine synthase; Provisional
Probab=94.83 E-value=0.2 Score=43.92 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=61.8
Q ss_pred HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhC-----CCCEEEeCCcccH
Q 023007 177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL-----GADEVFTESQLEV 249 (288)
Q Consensus 177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~ 249 (288)
+..+...... +.++|+-.|+ |..++.++.+++.+. .+++.+. .+++..+.+++. |...-+..+..+
T Consensus 113 ~~~L~~~~~~-~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD----~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D- 185 (296)
T PLN03075 113 FDLLSQHVNG-VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFD----IDPSANDVARRLVSSDPDLSKRMFFHTAD- 185 (296)
T ss_pred HHHHHHhhcC-CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHhhhccCccCCcEEEECc-
Confidence 3444443333 6799999999 989998888887553 4566666 577777766542 222111111111
Q ss_pred HHHHHHhcCCCCccEEEECC------Cccc--HHHHHhhccCCCeeC
Q 023007 250 KNVKGLLANLPEPALGFNCV------GGNS--ASKVLKFLRFREEQW 288 (288)
Q Consensus 250 ~~i~~~~~~~g~~D~v~d~~------g~~~--~~~a~~~l~~~G~~v 288 (288)
+.+.....+++|+||-.+ ..+. ++...+.|+|||.++
T Consensus 186 --a~~~~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lv 230 (296)
T PLN03075 186 --VMDVTESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLM 230 (296)
T ss_pred --hhhcccccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEE
Confidence 111222122599998875 2222 378889999999874
No 459
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.80 E-value=0.24 Score=38.66 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=46.2
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPAL 264 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~ 264 (288)
.++++++|+|+ |.+|...++.+...| .+++++. .+.++.+ ..++++...+ ..... ...+... ++|+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~----r~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~---~~Dv 84 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVN----RTLEKAKALAERFGELGI-AIAYL---DLEELLA---EADL 84 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEc----CCHHHHHHHHHHHhhccc-ceeec---chhhccc---cCCE
Confidence 45689999999 999999999888886 5666665 3555544 3455553210 00000 1111111 4999
Q ss_pred EEECCCccc
Q 023007 265 GFNCVGGNS 273 (288)
Q Consensus 265 v~d~~g~~~ 273 (288)
|+.|++...
T Consensus 85 vi~~~~~~~ 93 (155)
T cd01065 85 IINTTPVGM 93 (155)
T ss_pred EEeCcCCCC
Confidence 999987644
No 460
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=94.80 E-value=0.15 Score=42.59 Aligned_cols=80 Identities=24% Similarity=0.247 Sum_probs=45.9
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCC-EEE--eCCcc-cHHHH-HHHhcCCCCccEE
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVF--TESQL-EVKNV-KGLLANLPEPALG 265 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~-~v~--~~~~~-~~~~i-~~~~~~~g~~D~v 265 (288)
++|+|++|.+|...++.+...|++++++.+..... ++..+.+++.+.. .++ |-.+. .++.+ .......+++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999988999998887532100 1112223344432 122 22111 12221 1111222359999
Q ss_pred EECCCc
Q 023007 266 FNCVGG 271 (288)
Q Consensus 266 ~d~~g~ 271 (288)
|.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 999885
No 461
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=94.75 E-value=0.29 Score=41.39 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=30.7
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
.+++++|+|+++++|.+.+..+...|++++++.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~ 38 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARR 38 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 56899999999999999888888999998888754
No 462
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.73 E-value=0.2 Score=43.75 Aligned_cols=203 Identities=16% Similarity=0.082 Sum_probs=106.2
Q ss_pred CCCeEEEEEeEEecChHHHHHH-h-CCCCCCCCCCcccc-cceEEEEEEe-cCCCCCCCCCCEEEecCCC--Ccccce--
Q 023007 74 KENDVCVKMLAAPINPSDINRI-E-GVYPVRPKVPAVGG-YEGVGEVYSV-GSAVTRLAPGDWVIPSPPS--SGTWQS-- 145 (288)
Q Consensus 74 ~~~evlI~v~~~~i~~~D~~~~-~-g~~~~~~~~p~~~G-~e~~G~V~~~-G~~~~~~~~Gd~V~~~~~~--~G~~a~-- 145 (288)
..++|+|+.-+..-+..|-..+ . |.. ...+-...++ .|.+-.|.+- .++..-|+.|+..+.+.+- ...+.+
T Consensus 29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~-Iv~ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l 107 (371)
T COG0686 29 HGHEVLVETGAGAGSGFDDDDYEAAGAK-IVATAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEAL 107 (371)
T ss_pred CCcEEEEecCCcCCCCCChHHHHHcCCE-EecCHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHH
Confidence 4568999988776654432222 2 221 1001112233 4444444332 1223448999988877542 111111
Q ss_pred ---EEEeeCCcEEEcCC-CC----ChhhhcccccchHHHHHHHHhhcC----------CCCCCeEEEeCCCChHHHHHHH
Q 023007 146 ---YVVKDQSVWHKVSK-DS----PMEYAATIIVNPLTALRMLEDFTT----------LNSGDSIVQNGATSIVGQCIIQ 207 (288)
Q Consensus 146 ---~~~~~~~~l~~ip~-~~----~~~~aa~l~~~~~ta~~~l~~~~~----------~~~g~~vlI~g~~g~vG~~a~~ 207 (288)
-+..-+.-.+..|+ ++ ++.+.|.-......|++..+..+. +.+ .+|.|+|+ |.+|.-++.
T Consensus 108 ~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~-~kv~iiGG-GvvgtnaAk 185 (371)
T COG0686 108 LKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLP-AKVVVLGG-GVVGTNAAK 185 (371)
T ss_pred HHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCC-ccEEEECC-ccccchHHH
Confidence 00001111233333 21 223332222123334543322221 233 47888899 999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC---Cc--c-cH-HHHHh
Q 023007 208 IARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGFNCV---GG--N-SA-SKVLK 279 (288)
Q Consensus 208 la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~---g~--~-~~-~~a~~ 279 (288)
+|.-+|++|++.. .+.+|+..+.. ++.+ +.... .....+.+... +.|++|..+ |. + .. +.-++
T Consensus 186 iA~glgA~Vtild----~n~~rl~~ldd~f~~r-v~~~~-st~~~iee~v~---~aDlvIgaVLIpgakaPkLvt~e~vk 256 (371)
T COG0686 186 IAIGLGADVTILD----LNIDRLRQLDDLFGGR-VHTLY-STPSNIEEAVK---KADLVIGAVLIPGAKAPKLVTREMVK 256 (371)
T ss_pred HHhccCCeeEEEe----cCHHHHhhhhHhhCce-eEEEE-cCHHHHHHHhh---hccEEEEEEEecCCCCceehhHHHHH
Confidence 9999999999998 67888877764 3433 22111 11234444444 388888864 22 2 22 66688
Q ss_pred hccCCCeeC
Q 023007 280 FLRFREEQW 288 (288)
Q Consensus 280 ~l~~~G~~v 288 (288)
.|+||+.+|
T Consensus 257 ~MkpGsViv 265 (371)
T COG0686 257 QMKPGSVIV 265 (371)
T ss_pred hcCCCcEEE
Confidence 899988764
No 463
>PLN02476 O-methyltransferase
Probab=94.73 E-value=0.21 Score=43.39 Aligned_cols=103 Identities=10% Similarity=0.054 Sum_probs=62.4
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCccc-HHHH
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLE-VKNV 252 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~-~~~i 252 (288)
+..+.+..+.++||=+|. .+|..++.+++.++ .+++.+. .+++..+.+ ++.|..+-+.-...+ .+.+
T Consensus 110 L~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE----~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L 183 (278)
T PLN02476 110 LAMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACE----RDSNSLEVAKRYYELAGVSHKVNVKHGLAAESL 183 (278)
T ss_pred HHHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 444566777899998887 56777777777663 4666665 456655544 567765333222222 2344
Q ss_pred HHHh-cC-CCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007 253 KGLL-AN-LPEPALGFNCVGG----NSASKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~-~~-~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v 288 (288)
.++. ++ .+.||.||--... ..++.++++|++||.+|
T Consensus 184 ~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV 225 (278)
T PLN02476 184 KSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIV 225 (278)
T ss_pred HHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 4432 11 2359986654433 22388899999999875
No 464
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.70 E-value=0.13 Score=43.03 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=57.5
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE------e---CCc-c-cHHHHH
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF------T---ESQ-L-EVKNVK 253 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~------~---~~~-~-~~~~i~ 253 (288)
..++.+||+.|+ +.|.-++.+|. .|.+|+++. .++...+.+ ++.+..... . ... . ....+.
T Consensus 32 ~~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD----~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 104 (213)
T TIGR03840 32 LPAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVE----LSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFF 104 (213)
T ss_pred CCCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEe----CCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCC
Confidence 357789999998 66788888875 599999998 578777764 333321100 0 000 0 011111
Q ss_pred HHhc-CCCCccEEEECCCc---------ccHHHHHhhccCCCee
Q 023007 254 GLLA-NLPEPALGFNCVGG---------NSASKVLKFLRFREEQ 287 (288)
Q Consensus 254 ~~~~-~~g~~D~v~d~~g~---------~~~~~a~~~l~~~G~~ 287 (288)
++.. ..+.+|.|+|+..- ..++...++|+|+|++
T Consensus 105 ~~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ 148 (213)
T TIGR03840 105 ALTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQ 148 (213)
T ss_pred CCCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeE
Confidence 2211 11248999997641 2236778999999974
No 465
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.63 E-value=0.29 Score=37.86 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=27.6
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
+|+|.|+ |++|...++.+.+.|...+.++|.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4899999 9999999999999999777777654
No 466
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=94.61 E-value=0.13 Score=44.48 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=28.0
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+|||+|++|.+|...++.+...|.+|+++.+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r 31 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTS 31 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCC
Confidence 4899999999999999999999999988873
No 467
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.60 E-value=0.15 Score=45.01 Aligned_cols=61 Identities=23% Similarity=0.316 Sum_probs=52.8
Q ss_pred hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007 183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244 (288)
Q Consensus 183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~ 244 (288)
.+.+.||+++||-..+|.+|...+..+...|+++|++.-.. -+.+|+..++.+|+.-+...
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~-ms~Ek~~~l~a~Gaeii~tp 157 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEK-MSKEKRILLRALGAEIILTP 157 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechh-hhHHHHHHHHHcCCEEEecC
Confidence 36799999999999999999999999999999999998544 57788889999999876543
No 468
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.60 E-value=0.4 Score=40.17 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=32.0
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
-.|.+|+|.|- |.+|+.+++++...|++++.++|.
T Consensus 21 l~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~ 55 (217)
T cd05211 21 LEGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDP 55 (217)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcC
Confidence 46899999999 999999999999999999999874
No 469
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.58 E-value=0.11 Score=40.44 Aligned_cols=83 Identities=17% Similarity=0.078 Sum_probs=52.1
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc------cHHHHHHHhcCCCCccEE
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL------EVKNVKGLLANLPEPALG 265 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~~~i~~~~~~~g~~D~v 265 (288)
|+|.|+ |++|.+.+..++..|.+|..+. ..+ +.+.+++.|........+. ..... ....+ .+|++
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~----r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~D~v 71 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVS----RSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-SADAG--PYDLV 71 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEE----SHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-GHHHS--TESEE
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEE----ccc-cHHhhhheeEEEEecccceecccccccCcc-hhccC--CCcEE
Confidence 689999 9999988888877999999998 344 6666766554322111000 00000 11122 49999
Q ss_pred EECCCcccHHHHHhhccC
Q 023007 266 FNCVGGNSASKVLKFLRF 283 (288)
Q Consensus 266 ~d~~g~~~~~~a~~~l~~ 283 (288)
|-|+-......+++.+++
T Consensus 72 iv~vKa~~~~~~l~~l~~ 89 (151)
T PF02558_consen 72 IVAVKAYQLEQALQSLKP 89 (151)
T ss_dssp EE-SSGGGHHHHHHHHCT
T ss_pred EEEecccchHHHHHHHhh
Confidence 999988777666665544
No 470
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.58 E-value=0.22 Score=39.86 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=53.0
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC--CcccHHHHHHHhcCCCCccEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE--SQLEVKNVKGLLANLPEPALG 265 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~--~~~~~~~i~~~~~~~g~~D~v 265 (288)
.|..|+++|+.-++|....+-+...|++|+++. ++++.+..+-++...++.-- +-...+.+.++...-+.+|..
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAva----R~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVA----RNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEe----cCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 578899999988899999999999999999999 56777766644444433211 111234444443332336777
Q ss_pred EECCCc
Q 023007 266 FNCVGG 271 (288)
Q Consensus 266 ~d~~g~ 271 (288)
+|+.|-
T Consensus 82 VNNAgv 87 (245)
T KOG1207|consen 82 VNNAGV 87 (245)
T ss_pred hccchh
Confidence 777663
No 471
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.56 E-value=0.31 Score=42.59 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=32.1
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
+....-.-.|++|+|.|.+|.+|...+.++...|++|+++-
T Consensus 150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~ 190 (283)
T PRK14192 150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICH 190 (283)
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEe
Confidence 33333346789999999955699999999999999776665
No 472
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.54 E-value=0.24 Score=42.04 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=60.9
Q ss_pred HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCccc-HHHH
Q 023007 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLE-VKNV 252 (288)
Q Consensus 180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~-~~~i 252 (288)
+....+..+.++||=.|. +.|..++.+++.+ +.+++.+. .+++..+.+ ++.|.+.-+.....+ .+.+
T Consensus 60 L~~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD----~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L 133 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAID----IDKEAYEVGLEFIKKAGVDHKINFIQSDALSAL 133 (234)
T ss_pred HHHHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHH
Confidence 344566777889998887 4566666666665 35777776 456665554 456654322222222 2334
Q ss_pred HHHhcC--CCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007 253 KGLLAN--LPEPALGFNCVGG----NSASKVLKFLRFREEQW 288 (288)
Q Consensus 253 ~~~~~~--~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v 288 (288)
.++... .+.||+||--..- ..+..+++++++||.++
T Consensus 134 ~~l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii 175 (234)
T PLN02781 134 DQLLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIA 175 (234)
T ss_pred HHHHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 444322 2259988754422 23378899999999874
No 473
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.53 E-value=0.29 Score=42.52 Aligned_cols=48 Identities=10% Similarity=0.201 Sum_probs=34.7
Q ss_pred CCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH-HhCC
Q 023007 185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-KGLG 237 (288)
Q Consensus 185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~-~~~g 237 (288)
....+++++|+|+ |+.+.+++..+...|++ ++++. ++.++.+.+ +.++
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~n----R~~~~a~~la~~~~ 167 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVA----RNEKTGKALAELYG 167 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHhC
Confidence 3445679999999 99999999999999985 66666 455555544 3443
No 474
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.52 E-value=0.2 Score=47.12 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=51.0
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v 265 (288)
..+++|+|+|+ |.+|+.++.+++..|++|+++...+. ......+.+++.|.....+.... . .. .+|+|
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~--~~-~~D~V 82 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------L--PE-DTDLV 82 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------c--cC-CCCEE
Confidence 35689999999 99999999999999999888763211 01122345667786554433221 1 11 38999
Q ss_pred EECCCcccH
Q 023007 266 FNCVGGNSA 274 (288)
Q Consensus 266 ~d~~g~~~~ 274 (288)
|-+.|-+..
T Consensus 83 v~s~Gi~~~ 91 (480)
T PRK01438 83 VTSPGWRPD 91 (480)
T ss_pred EECCCcCCC
Confidence 988886443
No 475
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.50 E-value=0.036 Score=48.02 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=28.3
Q ss_pred EEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 192 IVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
|||+|++|.+|...++.+...|.+|+++.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 31 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRS 31 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCC
Confidence 6899999999999999988899999999964
No 476
>PRK00536 speE spermidine synthase; Provisional
Probab=94.50 E-value=0.16 Score=43.81 Aligned_cols=90 Identities=9% Similarity=-0.037 Sum_probs=55.1
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCC-CEEE-eCCcccHHHHHHHhcCCCCccE-E
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA-DEVF-TESQLEVKNVKGLLANLPEPAL-G 265 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~-~~v~-~~~~~~~~~i~~~~~~~g~~D~-v 265 (288)
++|||+|+ +=|.++-+++|+.. +|..+. -+++-.+.+++ +.. ...+ |.+-.....+.+...+ ++|+ +
T Consensus 74 k~VLIiGG--GDGg~~REvLkh~~-~v~mVe----ID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~--~fDVII 144 (262)
T PRK00536 74 KEVLIVDG--FDLELAHQLFKYDT-HVDFVQ----ADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIK--KYDLII 144 (262)
T ss_pred CeEEEEcC--CchHHHHHHHCcCC-eeEEEE----CCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCC--cCCEEE
Confidence 89999987 44677889999864 666665 45666666665 221 0011 1121111223332223 5997 5
Q ss_pred EECCCcccH-HHHHhhccCCCeeC
Q 023007 266 FNCVGGNSA-SKVLKFLRFREEQW 288 (288)
Q Consensus 266 ~d~~g~~~~-~~a~~~l~~~G~~v 288 (288)
+|+.-.+.+ ..+.++|+++|.+|
T Consensus 145 vDs~~~~~fy~~~~~~L~~~Gi~v 168 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKEDGVFI 168 (262)
T ss_pred EcCCCChHHHHHHHHhcCCCcEEE
Confidence 665655555 88899999999875
No 477
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.17 Score=41.38 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=25.1
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
+++|+|+++++|...+..+... .+|+.+.+
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r 31 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGR 31 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEec
Confidence 6899999999999877777666 88888874
No 478
>PRK07574 formate dehydrogenase; Provisional
Probab=94.46 E-value=0.19 Score=45.85 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.2
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.|++|.|+|. |.+|...++.++.+|.+|+...+
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr 223 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDR 223 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC
Confidence 5689999999 99999999999999999998874
No 479
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=94.44 E-value=0.53 Score=42.64 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=59.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHHHHH------------
Q 023007 190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKG------------ 254 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~i~~------------ 254 (288)
++|.|+|+||.+|..++.+++.. .++|.+.+.. ++-+. .+.+++|.+..+.-.++.....++.
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~--~n~~~L~~q~~~f~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~ 79 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAG--KNVALMVEQILEFRPKFVAIDDEASLKDLKTMLQQQGSRTEVL 79 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCccccEEEEEEcC--CCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhcCCCCcEEE
Confidence 57999999999999999998875 3788888754 33333 3566789988776654432222222
Q ss_pred --------HhcCCCCccEEEECCCccc-HHHHHhhccCC
Q 023007 255 --------LLANLPEPALGFNCVGGNS-ASKVLKFLRFR 284 (288)
Q Consensus 255 --------~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~ 284 (288)
+.... .+|+|++..-|-. +...+..++.|
T Consensus 80 ~G~~~l~~l~~~~-~~D~vv~AivG~aGL~pt~~Ai~~g 117 (389)
T TIGR00243 80 VGEEGICEMAALE-DVDQVMNAIVGAAGLLPTLAAIRAG 117 (389)
T ss_pred ECHHHHHHHHcCC-CCCEEEEhhhcHhhHHHHHHHHHCC
Confidence 22221 3899999875533 35555555544
No 480
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.44 E-value=0.22 Score=42.01 Aligned_cols=32 Identities=16% Similarity=0.320 Sum_probs=28.7
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
+++|+|++|++|...++.+...|++++++.+.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecC
Confidence 69999999999999998888889999998753
No 481
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.43 E-value=0.22 Score=43.65 Aligned_cols=84 Identities=17% Similarity=0.060 Sum_probs=53.0
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE---EEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE---VFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
+|+|+|+ |.+|.+.+..+...|.+|+.+. .++++.+.+++.|... -............+. . .+|+||-
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~----r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~-~~d~vil 72 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVA----RRGAHLDALNENGLRLEDGEITVPVLAADDPAEL---G-PQDLVIL 72 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEE----CChHHHHHHHHcCCcccCCceeecccCCCChhHc---C-CCCEEEE
Confidence 5899999 9999988888888899999988 3466666666555421 000000000111111 1 4899999
Q ss_pred CCCcccHHHHHhhccC
Q 023007 268 CVGGNSASKVLKFLRF 283 (288)
Q Consensus 268 ~~g~~~~~~a~~~l~~ 283 (288)
|+.......+++.+++
T Consensus 73 a~k~~~~~~~~~~l~~ 88 (304)
T PRK06522 73 AVKAYQLPAALPSLAP 88 (304)
T ss_pred ecccccHHHHHHHHhh
Confidence 9987776666655543
No 482
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.40 E-value=0.3 Score=42.86 Aligned_cols=54 Identities=22% Similarity=0.231 Sum_probs=41.8
Q ss_pred ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221 (288)
Q Consensus 168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~ 221 (288)
.+|+.....+..+....---.|++|.|+|.++.+|.-.+.++...|++|+++-+
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~ 191 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS 191 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECC
Confidence 455555555555655444467999999999889999999999999999998853
No 483
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.37 E-value=0.44 Score=43.36 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=32.4
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~ 222 (288)
-+|.+|.|.|- |.+|+.+++.+...|++++++.+.
T Consensus 205 l~G~rVaVQG~-GNVg~~aa~~l~~~GAkvva~sds 239 (411)
T COG0334 205 LEGARVAVQGF-GNVGQYAAEKLHELGAKVVAVSDS 239 (411)
T ss_pred cCCCEEEEECc-cHHHHHHHHHHHHcCCEEEEEEcC
Confidence 48899999999 999999999999999999999864
No 484
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.36 E-value=0.38 Score=41.89 Aligned_cols=53 Identities=21% Similarity=0.224 Sum_probs=40.4
Q ss_pred ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
.+|+.....+..+....---.|++|+|.|.++.+|.-.+.++...|++|+.+-
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~h 189 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICH 189 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEec
Confidence 44544444555555544345899999999988899999999999999998875
No 485
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=94.35 E-value=0.19 Score=49.38 Aligned_cols=36 Identities=6% Similarity=0.092 Sum_probs=31.2
Q ss_pred CCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEc
Q 023007 186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIR 221 (288)
Q Consensus 186 ~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~ 221 (288)
.+++.+|||+|++|-+|...++.+... |.+|+++.+
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r 348 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDI 348 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeC
Confidence 466789999999999999999888765 799999985
No 486
>PRK08317 hypothetical protein; Provisional
Probab=94.35 E-value=0.17 Score=42.44 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=59.4
Q ss_pred HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhC----CCC-EEEeCCcccHHHHH
Q 023007 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL----GAD-EVFTESQLEVKNVK 253 (288)
Q Consensus 181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~i~ 253 (288)
.....+.++++||-.|+ |. |..+..+++..+ .+++++. .+++..+.+++. +.. .+...+.. ..
T Consensus 12 ~~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d----~~~~~~~~a~~~~~~~~~~~~~~~~d~~---~~- 81 (241)
T PRK08317 12 FELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGID----RSEAMLALAKERAAGLGPNVEFVRGDAD---GL- 81 (241)
T ss_pred HHHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEe----CCHHHHHHHHHHhhCCCCceEEEecccc---cC-
Confidence 34567889999999999 44 888889988873 5777776 577777766543 111 11111110 10
Q ss_pred HHhcCCCCccEEEECC-----Cc--ccHHHHHhhccCCCeeC
Q 023007 254 GLLANLPEPALGFNCV-----GG--NSASKVLKFLRFREEQW 288 (288)
Q Consensus 254 ~~~~~~g~~D~v~d~~-----g~--~~~~~a~~~l~~~G~~v 288 (288)
.+.++ .+|+|+... .+ ..+....++|+++|.++
T Consensus 82 ~~~~~--~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 121 (241)
T PRK08317 82 PFPDG--SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVV 121 (241)
T ss_pred CCCCC--CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEE
Confidence 11122 489877642 22 12378889999999874
No 487
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.34 E-value=0.37 Score=42.30 Aligned_cols=53 Identities=19% Similarity=0.180 Sum_probs=40.3
Q ss_pred ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
.+|+.....+..+....---.|++|+|+|-++.+|.-.+.++...|+.|+++-
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 45555445555555543346799999999889999999999999999998883
No 488
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.32 E-value=0.042 Score=40.22 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=48.9
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d 267 (288)
.|++|||.|+ |.+|..-++.+...|++++++.. .. +..+ +.-.... +. + .+... ++|+||-
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~----~~---~~~~--~~i~~~~-~~--~---~~~l~---~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISP----EI---EFSE--GLIQLIR-RE--F---EEDLD---GADLVFA 66 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEES----SE---HHHH--TSCEEEE-SS------GGGCT---TESEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC----ch---hhhh--hHHHHHh-hh--H---HHHHh---hheEEEe
Confidence 5689999999 99999999999999999999983 22 2222 1111111 11 1 11112 3999999
Q ss_pred CCCcccHH-HHHhhccCCCee
Q 023007 268 CVGGNSAS-KVLKFLRFREEQ 287 (288)
Q Consensus 268 ~~g~~~~~-~a~~~l~~~G~~ 287 (288)
+++++..+ ...+..+..|.+
T Consensus 67 at~d~~~n~~i~~~a~~~~i~ 87 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGIL 87 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSE
T ss_pred cCCCHHHHHHHHHHHhhCCEE
Confidence 99988874 334444444443
No 489
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.32 E-value=0.33 Score=41.58 Aligned_cols=93 Identities=16% Similarity=0.068 Sum_probs=55.9
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEP 262 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~i~~~~~~~g~~ 262 (288)
.++.+||=.|+ +.|..+..+++. |.+|+++. .+++..+.+++ .|...-+.....+...+.....+ .+
T Consensus 43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD----~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~--~f 113 (255)
T PRK11036 43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCD----LSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLET--PV 113 (255)
T ss_pred CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEE----CCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCC--CC
Confidence 45678887777 567777888775 88998886 57777776653 33321111111112233222233 49
Q ss_pred cEEEECCC-----cc--cHHHHHhhccCCCeeC
Q 023007 263 ALGFNCVG-----GN--SASKVLKFLRFREEQW 288 (288)
Q Consensus 263 D~v~d~~g-----~~--~~~~a~~~l~~~G~~v 288 (288)
|+|+.... .+ .+..+.+.|+|+|+++
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~ 146 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPGGALS 146 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEE
Confidence 99885432 21 2377889999999973
No 490
>PRK14030 glutamate dehydrogenase; Provisional
Probab=94.30 E-value=0.83 Score=42.37 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=30.2
Q ss_pred CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
-.|.+|+|.|- |.+|+.+++.+...|++|+++.
T Consensus 226 l~g~~vaIQGf-GnVG~~aA~~L~e~GakvVavS 258 (445)
T PRK14030 226 IKGKTVAISGF-GNVAWGAATKATELGAKVVTIS 258 (445)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 46899999998 9999999999999999999964
No 491
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.29 E-value=0.39 Score=40.52 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=29.4
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~ 223 (288)
..+|+|.|+ |++|..++..+.+.|...+.++|.+
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 378999999 9999999999999999877777544
No 492
>PRK08223 hypothetical protein; Validated
Probab=94.27 E-value=0.2 Score=43.64 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=30.8
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~ 224 (288)
..+|+|.|+ |++|..+++.+.+.|...+.++|.+.
T Consensus 27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 378999999 99999999999999998888887654
No 493
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=94.25 E-value=0.087 Score=46.07 Aligned_cols=30 Identities=23% Similarity=0.458 Sum_probs=27.7
Q ss_pred eEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 191 SIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
+|||+|++|.+|.+....++..|.+++.+.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~ 31 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATS 31 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeC
Confidence 689999999999999999999898988885
No 494
>PLN00016 RNA-binding protein; Provisional
Probab=94.19 E-value=0.24 Score=45.09 Aligned_cols=88 Identities=14% Similarity=0.215 Sum_probs=52.5
Q ss_pred CCeEEEe----CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH--------HHHHHhCCCCEEEeCCcccHHHHHHHh
Q 023007 189 GDSIVQN----GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------KEKLKGLGADEVFTESQLEVKNVKGLL 256 (288)
Q Consensus 189 g~~vlI~----g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--------~~~~~~~g~~~v~~~~~~~~~~i~~~~ 256 (288)
..+|||+ |++|.+|...+..+...|.+|+++++.... ..+ ...+...+...+.. +...+....
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~v~~v~~----D~~d~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWG----DPADVKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc-hhhhccCchhhhhHhhhcCceEEEe----cHHHHHhhh
Confidence 3689999 999999999999998899999999864321 111 11122234333321 112233322
Q ss_pred cCCCCccEEEECCCccc--HHHHHhhcc
Q 023007 257 ANLPEPALGFNCVGGNS--ASKVLKFLR 282 (288)
Q Consensus 257 ~~~g~~D~v~d~~g~~~--~~~a~~~l~ 282 (288)
...+ +|+||++.+... ....++.++
T Consensus 127 ~~~~-~d~Vi~~~~~~~~~~~~ll~aa~ 153 (378)
T PLN00016 127 AGAG-FDVVYDNNGKDLDEVEPVADWAK 153 (378)
T ss_pred ccCC-ccEEEeCCCCCHHHHHHHHHHHH
Confidence 3333 999999987543 244444443
No 495
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.18 E-value=0.33 Score=42.69 Aligned_cols=89 Identities=10% Similarity=0.173 Sum_probs=54.9
Q ss_pred CeEEEeCCCChHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007 190 DSIVQNGATSIVGQC-IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 268 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~-a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~ 268 (288)
-+|.|+|. |.+|.. +..+.+..+.++..+++.+. ....+...+++|.....+ .++.+.+.. .+.++|+||++
T Consensus 5 lrVAIIGt-G~IGt~hm~~l~~~~~velvAVvdid~-es~gla~A~~~Gi~~~~~----~ie~LL~~~-~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGS-GNIGTDLMIKILRSEHLEPGAMVGIDP-ESDGLARARRLGVATSAE----GIDGLLAMP-EFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcC-cHHHHHHHHHHhcCCCcEEEEEEeCCh-hhHHHHHHHHcCCCcccC----CHHHHHhCc-CCCCCCEEEEC
Confidence 47899996 999987 44555555789998887532 112345677788643322 223343311 11249999999
Q ss_pred CCcccH-HHHHhhccCCC
Q 023007 269 VGGNSA-SKVLKFLRFRE 285 (288)
Q Consensus 269 ~g~~~~-~~a~~~l~~~G 285 (288)
++...- +.+.++++.|-
T Consensus 78 T~a~~H~e~a~~a~eaGk 95 (302)
T PRK08300 78 TSAGAHVRHAAKLREAGI 95 (302)
T ss_pred CCHHHHHHHHHHHHHcCC
Confidence 998765 55555555543
No 496
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=94.17 E-value=0.68 Score=42.85 Aligned_cols=92 Identities=10% Similarity=0.122 Sum_probs=60.3
Q ss_pred CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHH----------------
Q 023007 190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVK---------------- 250 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~---------------- 250 (288)
++|.|+|++|.+|..++++.+.. .++|++.... .+-+. .+.+++|.+..+...++....
T Consensus 58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag--~Ni~lL~~q~~~f~p~~v~v~d~~~~~~l~~~l~~~~~~~~vl 135 (454)
T PLN02696 58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAG--SNVTLLADQVRKFKPKLVAVRNESLVDELKEALADLDDKPEII 135 (454)
T ss_pred cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECC--CCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcCCCCCcEEE
Confidence 68999999999999999998875 4677777643 23333 345678888877665443222
Q ss_pred ----HHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC
Q 023007 251 ----NVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR 284 (288)
Q Consensus 251 ----~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~ 284 (288)
.+.++.... .+|+|++...|- -+...+..++.|
T Consensus 136 ~G~egl~~la~~~-evDiVV~AIvG~aGL~pTl~AIkaG 173 (454)
T PLN02696 136 PGEEGIVEVARHP-EAVTVVTGIVGCAGLKPTVAAIEAG 173 (454)
T ss_pred ECHHHHHHHHcCC-CCCEEEEeCccccchHHHHHHHHCC
Confidence 222322222 389999998774 345556666554
No 497
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.14 E-value=0.24 Score=40.87 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=29.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~ 224 (288)
.+|+|.|+ |++|.-.++.+...|...+.++|.+.
T Consensus 22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ 55 (197)
T cd01492 22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRT 55 (197)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 78999999 88999999999999998888887653
No 498
>PLN03139 formate dehydrogenase; Provisional
Probab=94.12 E-value=0.22 Score=45.44 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=29.5
Q ss_pred CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220 (288)
Q Consensus 188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~ 220 (288)
.|++|.|+|. |.+|...++.++.+|.+++...
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d 229 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHD 229 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEEC
Confidence 5789999998 9999999999999999998865
No 499
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.10 E-value=0.23 Score=41.53 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=50.7
Q ss_pred CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC---C-CEEEe--CC---cccH-HHHHHHhcC
Q 023007 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG---A-DEVFT--ES---QLEV-KNVKGLLAN 258 (288)
Q Consensus 189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g---~-~~v~~--~~---~~~~-~~i~~~~~~ 258 (288)
|+++++.|+.|++|+.....+...|+++.++.+ +.|+.+...+|. . ..++. ++ ..+. +..++....
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~----~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDD----SEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehh----hhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 899999999999999988888889999999884 455544443332 2 22221 11 1111 222333333
Q ss_pred CCCccEEEECCCc
Q 023007 259 LPEPALGFNCVGG 271 (288)
Q Consensus 259 ~g~~D~v~d~~g~ 271 (288)
.|.+|+.||..|-
T Consensus 81 fg~iDIlINgAGi 93 (261)
T KOG4169|consen 81 FGTIDILINGAGI 93 (261)
T ss_pred hCceEEEEccccc
Confidence 4469999998874
No 500
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=94.09 E-value=0.49 Score=37.07 Aligned_cols=82 Identities=18% Similarity=0.213 Sum_probs=45.9
Q ss_pred CeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHH---HHHHhCCCCE-EEeCCcc---cHHH-HHHHhcCCC
Q 023007 190 DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK---EKLKGLGADE-VFTESQL---EVKN-VKGLLANLP 260 (288)
Q Consensus 190 ~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~---~~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~~g 260 (288)
++++|+|++|++|...++.+...|. .++.+.+.....++.. +.+++.+... ++..+-. .++. +.......+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999988888887 5666665432222111 2333344332 2221111 1222 222222233
Q ss_pred CccEEEECCCc
Q 023007 261 EPALGFNCVGG 271 (288)
Q Consensus 261 ~~D~v~d~~g~ 271 (288)
.+|.++.+.|.
T Consensus 81 ~id~li~~ag~ 91 (180)
T smart00822 81 PLRGVIHAAGV 91 (180)
T ss_pred CeeEEEEcccc
Confidence 58999999873
Done!