BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023008
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 280 bits (715), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 204/302 (67%), Gaps = 21/302 (6%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M+IQCNVCEAAEA VLCCADEAALCW CD+K+HAANKLA KHQRVPLS+S++ +PKCDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSSSIKS 120
QE SGFFFCLQDRALLCRKCDVAIHT N +VSAHQRFLLTG+KV LE D G S+ S +
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120
Query: 121 LSGENILDTKS--HSLSRRDALMPVAAECKEVLPASSGGVGGFAMNKVS------FAGGS 172
+ + ++TK S+ + ++ G + G +N + + GS
Sbjct: 121 -NDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLVSSGS 179
Query: 173 AAGSTPSWHMDDFLALPELNQNYSFMD-NGSSKADSGKRGDSDSSSILRSAEEE-LDDDE 230
GS P W +++ L + +Q+Y +M+ NGSSKAD+ +RGDSDSSS++RSAEE+ D++
Sbjct: 180 TTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDGEDNNN 239
Query: 231 CLGQVPEASWAVPQIPSPPTASGLYWPKNPQNQYDSAFVPDIHHHSQLN------RTATR 284
CLG E SWAVPQI SPPTASGL WPK+ + S FVPDI + R R
Sbjct: 240 CLGG--ETSWAVPQIQSPPTASGLNWPKH--FHHHSVFVPDITSSTPYTGSSPNQRVGKR 295
Query: 285 RR 286
RR
Sbjct: 296 RR 297
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 88/106 (83%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M+IQC+VCE A A V+CCADEAALC +CD ++HAANKLASKHQR+ L+S ST+ P+CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVAL 106
QE + F FC++DRALLCR CD +IH ANS + HQRFL TG+KVAL
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 56 KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPAD 110
+CD+C++ C D A LC +CD+ IH AN S HQR L + D
Sbjct: 4 QCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCD 58
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 97/145 (66%), Gaps = 8/145 (5%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M+IQC+VCE A A ++CCADEAALC +CD +VHAANKLASKHQR+ L S ST+ P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSSSIKS 120
E + F FC++DRALLCR CD A H N+ + HQRFL TG++VAL SS+S
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVAL-------SSTSCNQ 113
Query: 121 LSGENILD-TKSHSLSRRDALMPVA 144
+N D + SLS+ P A
Sbjct: 114 EVEKNHFDPSNQQSLSKPPTQQPAA 138
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 139/282 (49%), Gaps = 34/282 (12%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL---SSSSTQMPKC 57
M+I+C+VC+ EA V C ADEA+LC CD +VH ANKLASKH R L SSS+T P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 58 DICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSSS 117
DICQ+ FC QDRA+LC+ CD +IH AN + H RFLLTGVK++ + +S S
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120
Query: 118 IKSLSGENILDTKSHSLSRRDAL-MPVAA--ECKEVLPASSGGVGGFAMNK---VSFAGG 171
S S S+S L P++A + ++ P S G ++N+ S
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISE 180
Query: 172 SAAGSTPSWHMDDFL--ALPELNQNYSFMDNGSSKADSGKRGDSDSSSILRSAEEELDDD 229
+ P WH++DFL +LP Y F K GD D +L E E D++
Sbjct: 181 YLMDTLPGWHVEDFLDSSLP----TYGF----------SKSGDDD--GVLPYMEPEDDNN 224
Query: 230 ECLGQVPEASWAVPQIPSPPTASGLYWPKNPQ-------NQY 264
+ + P G++ P+ PQ NQY
Sbjct: 225 TKRNNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQY 266
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1
SV=1
Length = 242
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQ-MPKCDI 59
M+I C VC+ EA V CCADEAALC CD VH ANKLA KH R L+S + + P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 60 CQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEP-ADPGASSSS 117
C E FC +DRA+LCR+CD+ IH AN + H RFLLTGVK++ P A P AS+S+
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSN 119
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C++ A + C AD A LC +CD K+H ANKLAS+H+RV L C++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSSSIKSLSGE 124
C D A LC CD IH+AN H+R +T A+ PA +SS + G
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVDEDGG 118
Query: 125 NI 126
++
Sbjct: 119 DV 120
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana
GN=COL1 PE=1 SV=1
Length = 355
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C +A V C AD A LC CD +VHAAN+LAS+H+RV + C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
FFC D A LC CD IH+AN HQR
Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL 47
C CE A A C AD A+LC CD ++H+AN LA +HQRVP+
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C++A A + C D A LC CD KVHAANKLAS+H RV + C++C++
Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 56
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLT 100
C D A LC CD IH+AN H+R +T
Sbjct: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana
GN=COL2 PE=1 SV=1
Length = 347
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C +A V C AD A LC CD +VHAAN++AS+H+RV + C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAP 66
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
F C D A LC CD IH+AN HQR
Sbjct: 67 AAFLCKADAASLCTACDAEIHSANPLARRHQR 98
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL 47
C CE+A A LC AD A+LC CD ++H+AN LA +HQRVP+
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 50 SSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
S T CD C+ + +C D A LC CD +H AN S H+R
Sbjct: 9 SGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHER 55
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C + V C AD A LC CD +VH+AN++AS+H+RV + C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
F C D A LC CD +H+AN HQR
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL 47
C CE A A LC AD+A+LC CD +VH+AN LA +HQRVP+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
CD C+ + +C D A LC CD +H+AN S H+R +
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV 62
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C+++ A V C AD A LC CD +VH AN+L +KH R L CD C E+
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRF 97
FC +R++LC+ CD HTA+S + + + F
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASSSLHSRRPF 96
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
CD C + +C D A LC CD +H AN + H R LL
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL 55
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 2 RIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQ 61
R+ C+ C A + C AD A LC CD +VH AN L+ KH R + CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------CDNCG 56
Query: 62 ETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTG 101
C D +LC++CD +H + S AH R + G
Sbjct: 57 NEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 49 SSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
SSS ++P CD C E + FC D A LC CD +HTAN H R
Sbjct: 2 SSSERVP-CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR 48
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C++ A V C D A LC CD ++H+ ++H+RV + C++C++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSSSIKSLSG 123
C D A LC CD IH+AN S H+R + + E A S+SS + G
Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILG 127
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQE 62
+ C C A + C AD A LC CD VH+AN L+ KH R + CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60
Query: 63 TSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTG 101
C D +LC++CD +H + S + H+R + G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 48 SSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
+S++ + C+ C E + FC D A LC CD +H+AN H R
Sbjct: 3 TSTTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR 51
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M C C+A A V C AD A LC CD KVH+AN L+ +H R L CD C
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSC 60
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
+ C + LC C+ H S S H+R
Sbjct: 61 KNQPCVVRCFDHKMFLCHGCNDKFHGGGS--SEHRR 94
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
C+ C+ +C+ D A LC CD +H+ANS H R +L
Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C AA + V C AD A LC CD +VHAAN++AS+H+RV + C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV---------CEACERAP 85
Query: 65 GFFFCLQDRALLCRKCDVAIHTAN 88
C D A LC CDV +H+AN
Sbjct: 86 AALACRADAAALCVACDVQVHSAN 109
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
CD C+ +C D A LC CD +H AN S H+R
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHER 74
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana
GN=COL9 PE=2 SV=1
Length = 372
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QETSGFFFCLQDRALLCRKCDVAIH 85
C+++R LC+ CD + H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
CD C E +C D A LC CD ++H+AN+ H R L+
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV---------CERC 51
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTA-NSYVSAHQR 96
C +R LC+ CD + H NS ++H +
Sbjct: 52 NAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
CD C E +C D A LC CD +H+AN+ H R L+
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana
GN=COL6 PE=2 SV=2
Length = 406
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSS 51
C+ C A+ C AD+A LC CD VH+AN LA +H+RV L S+S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
CD C + ++C D A LC CD ++H+AN H+R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPK 56
C+ C A+ C AD+A LC CD VH+AN LA +H+RV L ++S + K
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVK 68
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
CD C + ++C D A LC+ CD +H+AN H+R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M +C+ C +A + C +D A LC CD VH+AN L+ +H R L C+ C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51
Query: 61 QETSGFFFCLQDRALLCRKC 80
C+ + LC+ C
Sbjct: 52 SLQPTAVHCMNENVSLCQGC 71
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 56 KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPA 109
+CD C +C D A LC CDV +H+AN H R LL K +L+P
Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCE-KCSLQPT 56
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M +C+ C ++A + C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51
Query: 61 QETSGFFFCLQDRALLCRKC 80
CL ++ C+ C
Sbjct: 52 FSQPAAIRCLDEKVSYCQGC 71
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 55 PKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
PKCD C + +C D A LC CDV +H+AN H R L+
Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI 47
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana
GN=COL7 PE=2 SV=1
Length = 392
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 5 CNVC-EAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSS 51
C+ C + + A C AD+A LC CD +H+AN LA +H+RV L SSS
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 57 CDICQETS-GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASS 115
CD C + S ++C D A LC+ CD +IH+AN H+R V L+ + P ++
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHER-------VRLQSSSPTETA 74
Query: 116 SSIKSLSGENILDTKSHSLSRRDALMPVAAEC 147
S+ E RR A P + C
Sbjct: 75 DKTTSVWYEGF---------RRKARTPRSKSC 97
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSS 51
C +C A C +D+A LC CD+ VH+AN +A+KH+RV L ++
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNE 67
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSS 116
C++C ++C D A LC CD ++H+AN + H+R L +++
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEIS----------- 69
Query: 117 SIKSLSGENILDTKSHSLSRRDALMP 142
+ G L + HS RR A P
Sbjct: 70 --NDVRGGTTLTSVWHSGFRRKARTP 93
>sp|P36406|TRI23_HUMAN E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens GN=TRIM23 PE=1
SV=1
Length = 574
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQE 62
I+C+ EA A V C LC EC H+ LA KH+RVPL+ + C Q
Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCSQHQV 183
Query: 63 TSGFFFCLQD 72
+ F CL++
Sbjct: 184 HAIEFVCLEE 193
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCD-- 58
+ ++C+ A + C ++ LC C + H+ N L SKH+R+PL+ + C
Sbjct: 104 LNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVHCRLH 162
Query: 59 -------ICQETSGFFFCLQDRALLCRKC-DVAIHTANSYV 91
+C+E S C + L+C C D H +S+V
Sbjct: 163 SSYVVEFVCKELS----CDTESPLMCMMCRDYGRHKGHSHV 199
>sp|P36407|TRI23_RAT E3 ubiquitin-protein ligase TRIM23 OS=Rattus norvegicus GN=Trim23
PE=2 SV=2
Length = 573
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQE 62
I+C+ EA A V C LC EC H+ LA KH+RVPL+ + C Q
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 183
Query: 63 TSGFFFCLQD 72
+ F CL++
Sbjct: 184 HAIEFVCLEE 193
>sp|Q8BGX0|TRI23_MOUSE E3 ubiquitin-protein ligase TRIM23 OS=Mus musculus GN=Trim23 PE=2
SV=1
Length = 574
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQE 62
I+C+ EA A V C LC +C H+ LA KH+RVPL+ + C Q
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 183
Query: 63 TSGFFFCLQD 72
+ F CL++
Sbjct: 184 HAIEFVCLEE 193
>sp|Q5RFL4|ZFYV1_PONAB Zinc finger FYVE domain-containing protein 1 OS=Pongo abelii
GN=ZFYVE1 PE=2 SV=1
Length = 789
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 8 CEAAEAKVLCCADEAAL-CWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGF 66
C + + C + +L C C++++H +L + H+R+ L +P CD+C+ SG
Sbjct: 24 CSGTDEAIFECDECCSLQCLRCEEELHRQERLRN-HERIRLKPG--HVPYCDLCKGLSGH 80
Query: 67 FFCLQDRALL-CRKCDVAI 84
++ RA++ C+ C + +
Sbjct: 81 LPGVRQRAIVRCQTCKINL 99
>sp|Q9HBF4|ZFYV1_HUMAN Zinc finger FYVE domain-containing protein 1 OS=Homo sapiens
GN=ZFYVE1 PE=1 SV=1
Length = 777
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 8 CEAAEAKVLCCADEAAL-CWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGF 66
C + + C + +L C C++++H +L + H+R+ L +P CD+C+ SG
Sbjct: 24 CSGTDEAIFECDECCSLQCLRCEEELHRQERLRN-HERIRLKPG--HVPYCDLCKGLSGH 80
Query: 67 FFCLQDRALL-CRKCDVAI 84
++ RA++ C+ C + +
Sbjct: 81 LPGVRQRAIVRCQTCKINL 99
>sp|Q9AK25|ADD1_STRCO Adenosine deaminase 1 OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=add1 PE=3 SV=1
Length = 396
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 124 ENILDTKSHS---LSRRDALMPVAAECKEVLPASSGGVGGFAMNKVSFAGGSAAGSTPSW 180
E L+T SH+ + RDAL+ VAAEC E L G +V +A P
Sbjct: 81 ERYLETFSHTVGVMQTRDALVRVAAECAEDLAED-----GVVYAEVRYA--------PEQ 127
Query: 181 HMDDFLALPELNQ--NYSFMDNGSSKADSGKR 210
H++ L L E+ + N F + D+G R
Sbjct: 128 HLEKGLTLEEVVEAVNEGFREGERRARDNGHR 159
>sp|Q895G2|ISPH_CLOTE 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium
tetani (strain Massachusetts / E88) GN=ispH PE=3 SV=1
Length = 635
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 154 SSGGVGGFAMNKVSFAGGSAAGSTPSWHMDDFL---ALPELNQNYSFMDNGSSKADSGKR 210
++G + + NK S G +A STP W + + + + LN+ +M+N + G+
Sbjct: 241 NAGELPDYISNKYSKIGVTAGASTPDWIIKEAIFKMSNKNLNEQLEYMENNDIQISIGQE 300
Query: 211 GDSDSSSILRSAE 223
+ + SI+ S E
Sbjct: 301 VEGEIVSIVSSNE 313
>sp|Q9V4M2|WECH_DROME Protein wech OS=Drosophila melanogaster GN=wech PE=1 SV=2
Length = 832
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 21/123 (17%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL-----------SSSS 51
I C CE + A + C +C +C + H + L+S H V L SS +
Sbjct: 121 ISCGWCEVS-ASIRCLECNEFMCNDCL-REHRNSPLSSNHSIVSLPTPIGASPTGGSSVN 178
Query: 52 TQMPK-----CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVAL 106
Q P CDI E + C R L+C+ C + H +SY S + G K L
Sbjct: 179 AQTPPSGNFICDIHNEMLRYV-CDYCRKLVCQCCTLHEHKEHSYASIQS--FMVGSKEKL 235
Query: 107 EPA 109
E A
Sbjct: 236 EGA 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,197,193
Number of Sequences: 539616
Number of extensions: 4348722
Number of successful extensions: 13282
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 13153
Number of HSP's gapped (non-prelim): 105
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)