BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023016
MGFLRNIMDLEKQNCLSVILRNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVP
ALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVE
DETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNEN
YLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPSIFGFVNSLIGIRSVYIIVFM
VAMLMLLRTLGKDDEEPSRVGTSDQSEHARSTVSRAENDEYRSGEKED

High Scoring Gene Products

Symbol, full name Information P value
PDIL5-2
PDI-like 5-2
protein from Arabidopsis thaliana 1.1e-76
pdi2
protein disulfide isomerase
gene from Dictyostelium discoideum 0.00011

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023016
        (288 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2014681 - symbol:PDIL5-2 "PDI-like 5-2" specie...   772  1.1e-76   1
DICTYBASE|DDB_G0291434 - symbol:pdi2 "protein disulfide i...   122  0.00011   1


>TAIR|locus:2014681 [details] [associations]
            symbol:PDIL5-2 "PDI-like 5-2" species:3702 "Arabidopsis
            thaliana" [GO:0006662 "glycerol ether metabolic process"
            evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0015035 "protein
            disulfide oxidoreductase activity" evidence=IEA] [GO:0045454 "cell
            redox homeostasis" evidence=IEA] [GO:0009505 "plant-type cell wall"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0003756 "protein
            disulfide isomerase activity" evidence=ISS] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0000394 "RNA splicing, via
            endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
            "methionine biosynthetic process" evidence=RCA] [GO:0030244
            "cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
            vesicle transport" evidence=RCA] InterPro:IPR005746
            InterPro:IPR013766 InterPro:IPR017937 Pfam:PF00085 PRINTS:PR00421
            PROSITE:PS00194 GO:GO:0005783 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005774 GO:GO:0009055
            Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0009505
            GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035 EMBL:AC007887
            GO:GO:0006662 eggNOG:COG0526 GO:GO:0003756 HSSP:P07237 KO:K09580
            EMBL:AF386986 EMBL:BT008751 IPI:IPI00521805 RefSeq:NP_564462.1
            UniGene:At.15140 UniGene:At.39523 ProteinModelPortal:Q94F09
            SMR:Q94F09 PaxDb:Q94F09 PRIDE:Q94F09 EnsemblPlants:AT1G35620.1
            GeneID:840461 KEGG:ath:AT1G35620 TAIR:At1g35620
            HOGENOM:HOG000239154 InParanoid:Q94F09 OMA:WDGDEEY PhylomeDB:Q94F09
            ProtClustDB:CLSN2688320 Genevestigator:Q94F09 Uniprot:Q94F09
        Length = 440

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 154/250 (61%), Positives = 198/250 (79%)

Query:    45 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTL 104
             + SEDTMV YDFDK PALVA  P+YNEH++FYGPF++ FLEEF+KQ+FLPL +PIN DTL
Sbjct:   193 EVSEDTMVSYDFDKAPALVANHPTYNEHSVFYGPFEDGFLEEFVKQSFLPLILPINHDTL 252

Query:   105 NLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEAN 164
              LLKDD+RKIVL IVEDET E  +KL   L+AAA ANR+LVF YVG+KQF +F D+F  +
Sbjct:   253 KLLKDDERKIVLTIVEDETHESLEKLYKALRAAAHANRDLVFGYVGVKQFEEFVDSFHVD 312

Query:   165 KKSKLPKMVVWDGNENYLTVIGSESI-DEEDQGSQISRFLEGYREGRTEQKKVAGPSIFG 223
             KK+ LPK+VVWDG+E Y  V G E+I  EED  +Q+SRFLEGYREGRTE+KK+ GPS  G
Sbjct:   313 KKTNLPKIVVWDGDEEYDQVTGIETITQEEDHLTQVSRFLEGYREGRTEKKKINGPSFMG 372

Query:   224 FVNSLIGIRSVYIIVFMVAMLMLLRTLGKDDEEPSRVGTS----DQSEHARSTVSRAEND 279
             F+NS+IGIRSVYI+VF+VA++M+LR+LG+  EEP+ V T+    ++ + A +TV   E+ 
Sbjct:   373 FINSMIGIRSVYILVFLVAVIMMLRSLGQV-EEPTGVRTATAVRERVDQA-TTVPEDESS 430

Query:   280 EYR-SGEKED 288
             E++ S +KED
Sbjct:   431 EHKPSDKKED 440


>DICTYBASE|DDB_G0291434 [details] [associations]
            symbol:pdi2 "protein disulfide isomerase"
            species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
            space" evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
            [GO:0009617 "response to bacterium" evidence=IEP] [GO:0019953
            "sexual reproduction" evidence=IEP] [GO:0045454 "cell redox
            homeostasis" evidence=IEA] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0015035 "protein disulfide oxidoreductase
            activity" evidence=IEA] [GO:0009055 "electron carrier activity"
            evidence=IEA] [GO:0006662 "glycerol ether metabolic process"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0003756 "protein disulfide isomerase activity"
            evidence=IEA;ISS] [GO:0006457 "protein folding" evidence=ISS]
            [GO:0005788 "endoplasmic reticulum lumen" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR005746
            InterPro:IPR005788 InterPro:IPR005792 InterPro:IPR013766
            InterPro:IPR017937 Pfam:PF00085 PRINTS:PR00421 PROSITE:PS00194
            dictyBase:DDB_G0291434 GO:GO:0005615 GO:GO:0045335 GO:GO:0009617
            EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0009055
            Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0005788
            PROSITE:PS00014 GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035
            GO:GO:0019953 GO:GO:0006662 eggNOG:COG0526 GO:GO:0003756 KO:K09580
            TIGRFAMs:TIGR01130 TIGRFAMs:TIGR01126 RefSeq:XP_635206.1
            HSSP:P55059 ProteinModelPortal:Q54EN4 STRING:Q54EN4 PRIDE:Q54EN4
            EnsemblProtists:DDB0231409 GeneID:8628151 KEGG:ddi:DDB_G0291434
            OMA:CKKMAPT Uniprot:Q54EN4
        Length = 513

 Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 39/121 (32%), Positives = 64/121 (52%)

Query:    36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFY-GPFDEEFLEEFIKQNFLP 94
             KF  ++   DFS++ +     +  P +V  + S++E  + + G FD E L +FIK N +P
Sbjct:   197 KFAVVIDK-DFSKEHV-----ESTPNVVLFR-SFDEPTVAHKGEFDSESLIKFIKGNSVP 249

Query:    95 LSVPINQDTLNLLKDDKRKIVLA-IVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQ 153
             L   IN++T    K +   + LA +  D T++ +Q L    K A S     VFC+V +K+
Sbjct:   250 LLGEINRNTYK--KYESIAVPLAYLFIDSTQDNTQVLEDVKKIATSQKGNAVFCWVDMKK 307

Query:   154 F 154
             F
Sbjct:   308 F 308


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      288       288   0.00087  115 3  11 22  0.38    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  180 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.99u 0.09s 25.08t   Elapsed:  00:00:03
  Total cpu time:  24.99u 0.09s 25.08t   Elapsed:  00:00:03
  Start:  Sat May 11 06:48:02 2013   End:  Sat May 11 06:48:05 2013

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