Query 023016
Match_columns 288
No_of_seqs 170 out of 673
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 14:53:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023016.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023016hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ec3_A Protein disulfide-isome 99.9 4.2E-27 1.4E-31 211.9 18.3 186 27-221 41-241 (250)
2 2h8l_A Protein disulfide-isome 99.9 3E-27 1E-31 212.7 14.3 173 43-226 57-251 (252)
3 4f9z_D Endoplasmic reticulum r 99.9 4.9E-25 1.7E-29 195.3 17.2 176 25-210 41-227 (227)
4 3uem_A Protein disulfide-isome 99.9 2.7E-23 9.1E-28 194.3 20.6 200 28-237 52-263 (361)
5 3bj5_A Protein disulfide-isome 99.9 4.7E-23 1.6E-27 172.9 12.5 126 87-221 7-140 (147)
6 3f8u_A Protein disulfide-isome 99.9 2.4E-21 8.1E-26 187.9 16.4 183 44-237 162-366 (481)
7 3us3_A Calsequestrin-1; calciu 99.9 5.4E-21 1.9E-25 181.0 17.4 166 42-214 176-354 (367)
8 2r2j_A Thioredoxin domain-cont 99.8 1.1E-20 3.6E-25 179.4 11.4 162 51-221 175-342 (382)
9 1sji_A Calsequestrin 2, calseq 99.8 2E-19 6.8E-24 168.4 18.2 158 45-212 177-350 (350)
10 2b5e_A Protein disulfide-isome 99.8 3.2E-19 1.1E-23 174.3 12.9 166 62-237 186-372 (504)
11 2djk_A PDI, protein disulfide- 99.8 1E-18 3.4E-23 142.4 11.8 124 91-222 3-129 (133)
12 3apo_A DNAJ homolog subfamily 99.4 1.1E-11 3.9E-16 126.9 20.7 153 46-212 392-546 (780)
13 3idv_A Protein disulfide-isome 99.1 1.3E-09 4.5E-14 94.7 15.8 174 21-208 48-237 (241)
14 3apo_A DNAJ homolog subfamily 99.0 1.2E-08 4.1E-13 104.4 18.6 179 22-209 580-768 (780)
15 3ed3_A Protein disulfide-isome 99.0 1.3E-08 4.3E-13 93.8 16.0 174 21-205 51-264 (298)
16 2ywm_A Glutaredoxin-like prote 99.0 2.3E-08 7.9E-13 86.9 16.0 177 20-209 40-221 (229)
17 1a8l_A Protein disulfide oxido 99.0 1.7E-08 5.9E-13 87.3 15.1 177 21-207 39-225 (226)
18 1sji_A Calsequestrin 2, calseq 98.9 3.3E-08 1.1E-12 92.0 16.3 159 36-212 67-229 (350)
19 3us3_A Calsequestrin-1; calciu 98.8 7.9E-08 2.7E-12 90.5 14.7 158 36-211 69-230 (367)
20 3uem_A Protein disulfide-isome 98.6 1.5E-06 5.3E-11 80.5 18.3 146 47-206 180-355 (361)
21 3f8u_A Protein disulfide-isome 98.6 5.2E-07 1.8E-11 87.0 15.2 174 21-212 37-221 (481)
22 2r2j_A Thioredoxin domain-cont 98.4 3.8E-06 1.3E-10 79.1 14.2 169 21-211 38-221 (382)
23 2hls_A Protein disulfide oxido 98.4 1.8E-05 6.2E-10 70.3 17.2 156 37-211 65-229 (243)
24 2b5e_A Protein disulfide-isome 98.3 7.4E-06 2.5E-10 79.5 15.1 165 21-210 47-222 (504)
25 3tco_A Thioredoxin (TRXA-1); d 98.1 4.8E-05 1.6E-09 57.1 11.6 102 94-207 4-108 (109)
26 2l4c_A Endoplasmic reticulum r 98.1 2.2E-06 7.5E-11 69.4 4.1 65 28-93 56-124 (124)
27 1v98_A Thioredoxin; oxidoreduc 98.1 4.7E-05 1.6E-09 60.8 12.0 106 94-210 33-140 (140)
28 3gnj_A Thioredoxin domain prot 98.0 7.1E-05 2.4E-09 56.5 11.9 102 96-208 6-110 (111)
29 3q6o_A Sulfhydryl oxidase 1; p 98.0 0.00023 7.7E-09 62.4 16.7 171 21-207 46-239 (244)
30 3die_A Thioredoxin, TRX; elect 98.0 8.7E-05 3E-09 55.4 11.9 99 95-206 4-105 (106)
31 1thx_A Thioredoxin, thioredoxi 98.0 0.00013 4.5E-09 55.2 13.0 104 95-209 8-114 (115)
32 2trx_A Thioredoxin; electron t 98.0 0.00016 5.5E-09 54.4 13.0 102 95-207 3-107 (108)
33 1fb6_A Thioredoxin M; electron 98.0 0.00013 4.5E-09 54.3 12.4 101 96-207 2-105 (105)
34 2e0q_A Thioredoxin; electron t 98.0 0.00011 3.7E-09 54.4 11.8 101 96-208 1-103 (104)
35 1dby_A Chloroplast thioredoxin 98.0 0.00012 4.1E-09 55.0 12.0 101 96-207 3-106 (107)
36 2i4a_A Thioredoxin; acidophIle 97.9 0.00015 5.1E-09 54.2 11.9 100 96-206 4-106 (107)
37 3hz4_A Thioredoxin; NYSGXRC, P 97.9 5.3E-05 1.8E-09 60.8 10.0 115 94-219 6-123 (140)
38 2yzu_A Thioredoxin; redox prot 97.9 9E-05 3.1E-09 55.4 10.5 102 96-209 3-107 (109)
39 1t00_A Thioredoxin, TRX; redox 97.9 0.00024 8E-09 53.9 12.7 103 95-208 6-111 (112)
40 3p2a_A Thioredoxin 2, putative 97.9 0.00025 8.4E-09 57.1 13.3 103 95-209 39-144 (148)
41 1x5d_A Protein disulfide-isome 97.9 0.0001 3.5E-09 57.6 10.4 106 95-211 8-120 (133)
42 3t58_A Sulfhydryl oxidase 1; o 97.9 0.00048 1.7E-08 68.1 17.6 150 21-180 46-217 (519)
43 2i1u_A Thioredoxin, TRX, MPT46 97.9 0.00012 4.3E-09 56.1 10.7 107 92-209 10-119 (121)
44 3hxs_A Thioredoxin, TRXP; elec 97.9 0.00021 7.3E-09 56.6 12.0 105 94-208 22-139 (141)
45 1w4v_A Thioredoxin, mitochondr 97.9 0.00028 9.4E-09 54.8 12.4 104 93-207 12-118 (119)
46 1x5e_A Thioredoxin domain cont 97.8 0.00021 7E-09 55.8 11.6 107 94-213 7-115 (126)
47 3h79_A Thioredoxin-like protei 97.8 0.0003 1E-08 55.1 12.6 102 94-206 15-126 (127)
48 3ga4_A Dolichyl-diphosphooligo 97.8 0.00025 8.7E-09 60.9 13.0 117 84-208 8-153 (178)
49 1nsw_A Thioredoxin, TRX; therm 97.8 0.00014 4.9E-09 54.4 10.1 100 96-207 2-104 (105)
50 2o8v_B Thioredoxin 1; disulfid 97.8 0.00022 7.5E-09 56.5 11.6 102 96-208 24-128 (128)
51 2l5l_A Thioredoxin; structural 97.8 0.00039 1.3E-08 55.3 12.9 87 114-210 39-128 (136)
52 2ppt_A Thioredoxin-2; thiredox 97.8 0.00026 8.9E-09 58.2 12.2 103 96-210 49-154 (155)
53 2dml_A Protein disulfide-isome 97.8 0.00023 7.9E-09 55.5 11.2 103 95-208 18-124 (130)
54 3aps_A DNAJ homolog subfamily 97.8 0.0002 7E-09 55.2 10.6 107 96-209 5-114 (122)
55 2vim_A Thioredoxin, TRX; thior 97.7 0.00059 2E-08 50.6 12.1 100 97-207 2-104 (104)
56 2pu9_C TRX-F, thioredoxin F-ty 97.7 0.00084 2.9E-08 50.9 13.1 103 94-207 5-110 (111)
57 2dj1_A Protein disulfide-isome 97.7 0.00044 1.5E-08 54.6 11.7 107 95-213 18-129 (140)
58 3dxb_A Thioredoxin N-terminall 97.7 0.00051 1.7E-08 59.5 13.1 111 92-213 10-123 (222)
59 2vlu_A Thioredoxin, thioredoxi 97.7 0.00065 2.2E-08 52.3 12.2 107 92-209 11-121 (122)
60 3qfa_C Thioredoxin; protein-pr 97.7 0.00044 1.5E-08 53.6 11.2 102 94-206 12-115 (116)
61 3uvt_A Thioredoxin domain-cont 97.7 0.00054 1.9E-08 51.4 11.4 98 95-205 6-109 (111)
62 2voc_A Thioredoxin; electron t 97.7 0.0003 1E-08 53.9 10.1 100 96-208 3-105 (112)
63 3zzx_A Thioredoxin; oxidoreduc 97.7 0.00042 1.4E-08 53.6 10.9 71 125-206 33-104 (105)
64 1xwb_A Thioredoxin; dimerizati 97.7 0.00065 2.2E-08 50.5 11.3 100 96-206 2-105 (106)
65 1r26_A Thioredoxin; redox-acti 97.6 0.00072 2.5E-08 53.5 11.5 100 96-208 21-123 (125)
66 3m9j_A Thioredoxin; oxidoreduc 97.6 0.00081 2.8E-08 50.0 10.9 83 114-207 21-105 (105)
67 1ep7_A Thioredoxin CH1, H-type 97.6 0.00085 2.9E-08 50.6 11.1 83 115-208 26-111 (112)
68 4euy_A Uncharacterized protein 97.6 0.00042 1.4E-08 52.3 9.3 94 102-207 9-104 (105)
69 1syr_A Thioredoxin; SGPP, stru 97.6 0.00059 2E-08 52.1 10.0 99 96-207 11-111 (112)
70 3evi_A Phosducin-like protein 97.5 0.0011 3.7E-08 52.7 11.7 106 93-205 2-111 (118)
71 3f3q_A Thioredoxin-1; His TAG, 97.5 0.00097 3.3E-08 50.9 10.8 83 113-206 24-108 (109)
72 1faa_A Thioredoxin F; electron 97.5 0.0017 5.9E-08 50.1 12.4 104 93-207 17-123 (124)
73 2l57_A Uncharacterized protein 97.5 0.0019 6.3E-08 50.2 12.6 88 113-210 26-119 (126)
74 3ul3_B Thioredoxin, thioredoxi 97.5 0.00087 3E-08 52.5 10.1 101 93-205 24-127 (128)
75 3apq_A DNAJ homolog subfamily 97.4 0.0018 6.1E-08 55.4 12.5 107 94-212 97-206 (210)
76 2qsi_A Putative hydrogenase ex 97.4 0.0012 4.1E-08 54.4 10.8 100 98-208 19-123 (137)
77 3idv_A Protein disulfide-isome 97.4 0.002 6.9E-08 55.2 12.5 105 95-211 16-125 (241)
78 1gh2_A Thioredoxin-like protei 97.4 0.0041 1.4E-07 46.7 12.7 101 96-207 3-106 (107)
79 2dj3_A Protein disulfide-isome 97.4 0.0009 3.1E-08 52.3 9.2 109 93-211 6-121 (133)
80 2xc2_A Thioredoxinn; oxidoredu 97.4 0.003 1E-07 48.3 12.1 100 96-207 15-117 (117)
81 3d6i_A Monothiol glutaredoxin- 97.4 0.002 6.8E-08 48.8 10.9 102 96-208 2-109 (112)
82 2j23_A Thioredoxin; immune pro 97.4 0.0018 6.2E-08 50.3 10.6 102 93-207 14-120 (121)
83 1xfl_A Thioredoxin H1; AT3G510 97.4 0.0027 9.2E-08 49.7 11.7 103 94-207 16-123 (124)
84 1mek_A Protein disulfide isome 97.4 0.00047 1.6E-08 52.3 7.0 102 96-209 9-118 (120)
85 2vm1_A Thioredoxin, thioredoxi 97.3 0.0037 1.3E-07 47.3 11.8 84 115-209 30-115 (118)
86 2dbc_A PDCL2, unnamed protein 97.3 0.0069 2.4E-07 48.2 13.8 120 92-220 8-131 (135)
87 2l6c_A Thioredoxin; oxidoreduc 97.3 0.0019 6.5E-08 49.3 10.0 100 97-209 6-107 (110)
88 2wz9_A Glutaredoxin-3; protein 97.3 0.0039 1.3E-07 50.5 12.3 107 94-211 12-121 (153)
89 1ti3_A Thioredoxin H, PTTRXH1; 97.3 0.0023 7.9E-08 48.1 10.1 85 113-208 26-112 (113)
90 2djj_A PDI, protein disulfide- 97.3 0.0033 1.1E-07 48.1 11.0 102 94-209 7-118 (121)
91 1oaz_A Thioredoxin 1; immune s 97.3 0.0004 1.4E-08 54.7 5.8 101 96-207 5-122 (123)
92 2es7_A Q8ZP25_salty, putative 97.2 0.0009 3.1E-08 54.7 7.7 104 95-210 18-127 (142)
93 3qou_A Protein YBBN; thioredox 97.2 0.0024 8.1E-08 56.8 10.7 107 92-208 5-114 (287)
94 3d22_A TRXH4, thioredoxin H-ty 97.1 0.0052 1.8E-07 48.4 11.0 85 115-210 48-134 (139)
95 2oe3_A Thioredoxin-3; electron 97.0 0.0037 1.3E-07 48.2 9.3 82 113-205 30-113 (114)
96 2qc7_A ERP31, ERP28, endoplasm 97.0 0.0045 1.5E-07 55.3 11.0 101 94-207 5-118 (240)
97 3ed3_A Protein disulfide-isome 96.9 0.0081 2.8E-07 54.7 12.1 109 92-211 15-145 (298)
98 2qgv_A Hydrogenase-1 operon pr 96.9 0.002 6.7E-08 53.3 7.1 102 96-209 19-126 (140)
99 2f51_A Thioredoxin; electron t 96.9 0.01 3.5E-07 45.8 11.0 83 115-208 25-113 (118)
100 3emx_A Thioredoxin; structural 96.8 0.0063 2.2E-07 48.2 9.2 101 96-210 18-128 (135)
101 2yj7_A LPBCA thioredoxin; oxid 95.8 0.00019 6.5E-09 53.2 0.0 100 96-206 3-105 (106)
102 3h79_A Thioredoxin-like protei 96.8 0.0043 1.5E-07 48.3 7.7 72 21-92 49-127 (127)
103 1wou_A Thioredoxin -related pr 96.7 0.009 3.1E-07 46.5 9.0 100 96-205 7-122 (123)
104 1fo5_A Thioredoxin; disulfide 96.7 0.0068 2.3E-07 43.1 7.5 66 128-206 18-84 (85)
105 2hls_A Protein disulfide oxido 96.6 0.0077 2.6E-07 53.1 9.1 92 110-213 24-122 (243)
106 2trc_P Phosducin, MEKA, PP33; 96.6 0.0064 2.2E-07 53.1 8.2 110 93-206 98-211 (217)
107 3cxg_A Putative thioredoxin; m 96.6 0.011 3.9E-07 46.7 9.0 103 95-209 21-130 (133)
108 1nho_A Probable thioredoxin; b 96.6 0.0069 2.4E-07 43.1 7.0 67 128-207 17-84 (85)
109 3q6o_A Sulfhydryl oxidase 1; p 96.6 0.038 1.3E-06 47.9 13.1 107 95-211 13-130 (244)
110 2c0g_A ERP29 homolog, windbeut 96.5 0.024 8.2E-07 50.8 11.7 101 93-208 15-132 (248)
111 2av4_A Thioredoxin-like protei 96.5 0.02 6.8E-07 48.3 10.3 112 96-210 23-141 (160)
112 1qgv_A Spliceosomal protein U5 96.3 0.034 1.2E-06 44.7 10.6 95 113-210 23-123 (142)
113 3zzx_A Thioredoxin; oxidoreduc 96.3 0.007 2.4E-07 46.6 6.0 70 21-92 36-105 (105)
114 2dj0_A Thioredoxin-related tra 96.3 0.0015 5.2E-08 51.7 2.3 83 95-178 8-97 (137)
115 2fwh_A Thiol:disulfide interch 96.2 0.048 1.6E-06 42.8 10.5 83 114-206 32-126 (134)
116 1a8l_A Protein disulfide oxido 96.2 0.037 1.3E-06 47.0 10.5 88 112-209 22-114 (226)
117 3gix_A Thioredoxin-like protei 96.2 0.043 1.5E-06 44.4 10.4 95 113-210 23-123 (149)
118 1a0r_P Phosducin, MEKA, PP33; 96.1 0.024 8.1E-07 50.7 9.4 110 93-206 111-224 (245)
119 1wmj_A Thioredoxin H-type; str 96.1 0.0018 6.2E-08 50.1 1.6 72 129-211 53-125 (130)
120 2b5x_A YKUV protein, TRXY; thi 96.1 0.084 2.9E-06 40.8 11.3 75 125-209 42-146 (148)
121 3fk8_A Disulphide isomerase; A 96.0 0.06 2.1E-06 41.8 10.2 82 126-207 43-132 (133)
122 1zma_A Bacterocin transport ac 96.0 0.013 4.5E-07 44.7 6.2 100 93-204 11-117 (118)
123 1x5e_A Thioredoxin domain cont 95.9 0.016 5.6E-07 44.6 6.6 77 21-99 38-116 (126)
124 2kuc_A Putative disulphide-iso 95.8 0.074 2.5E-06 40.9 10.0 88 114-211 28-124 (130)
125 3t58_A Sulfhydryl oxidase 1; o 95.7 0.087 3E-06 51.9 12.4 106 95-211 13-130 (519)
126 3raz_A Thioredoxin-related pro 95.7 0.26 9.1E-06 38.8 13.2 93 113-213 24-145 (151)
127 2dml_A Protein disulfide-isome 95.7 0.03 1E-06 43.2 7.3 71 21-91 51-122 (130)
128 1x5d_A Protein disulfide-isome 95.7 0.024 8.1E-07 43.8 6.6 70 21-91 41-115 (133)
129 3or5_A Thiol:disulfide interch 95.7 0.27 9.2E-06 38.9 13.1 89 114-212 35-155 (165)
130 3uvt_A Thioredoxin domain-cont 95.7 0.02 6.8E-07 42.5 5.9 70 21-91 37-110 (111)
131 2l57_A Uncharacterized protein 95.6 0.026 8.8E-07 43.5 6.5 74 21-94 42-118 (126)
132 3ul3_B Thioredoxin, thioredoxi 95.6 0.023 8E-07 44.1 6.1 70 21-91 58-128 (128)
133 2i4a_A Thioredoxin; acidophIle 95.6 0.026 8.9E-07 41.6 6.1 70 21-91 36-106 (107)
134 2f9s_A Thiol-disulfide oxidore 95.6 0.19 6.5E-06 39.5 11.7 90 114-213 27-143 (151)
135 2voc_A Thioredoxin; electron t 95.5 0.02 7E-07 43.3 5.3 72 22-94 34-106 (112)
136 1lu4_A Soluble secreted antige 95.5 0.27 9.3E-06 37.4 12.0 87 114-207 25-135 (136)
137 3hxs_A Thioredoxin, TRXP; elec 95.5 0.041 1.4E-06 43.1 7.3 70 21-91 67-137 (141)
138 3gl3_A Putative thiol:disulfid 95.4 0.28 9.4E-06 38.4 12.1 92 114-213 29-147 (152)
139 2l5o_A Putative thioredoxin; s 95.4 0.23 7.9E-06 38.9 11.6 80 127-216 43-149 (153)
140 1hyu_A AHPF, alkyl hydroperoxi 95.4 0.28 9.5E-06 47.7 14.5 134 57-205 60-197 (521)
141 3ia1_A THIO-disulfide isomeras 95.3 0.22 7.4E-06 39.2 11.3 76 125-211 43-147 (154)
142 2lrn_A Thiol:disulfide interch 95.3 0.31 1.1E-05 38.4 12.1 87 114-213 30-146 (152)
143 2h8l_A Protein disulfide-isome 95.3 0.11 3.7E-06 45.5 10.2 103 91-211 3-116 (252)
144 1zzo_A RV1677; thioredoxin fol 95.3 0.39 1.3E-05 36.3 12.2 84 115-208 27-135 (136)
145 2e0q_A Thioredoxin; electron t 95.3 0.038 1.3E-06 40.1 6.1 69 22-91 33-101 (104)
146 2yzu_A Thioredoxin; redox prot 95.2 0.04 1.4E-06 40.5 6.2 70 21-91 34-104 (109)
147 2lja_A Putative thiol-disulfid 95.2 0.17 6E-06 39.5 10.2 89 113-211 30-146 (152)
148 3tco_A Thioredoxin (TRXA-1); d 95.1 0.043 1.5E-06 40.4 6.1 70 21-91 37-107 (109)
149 3apq_A DNAJ homolog subfamily 95.1 0.042 1.4E-06 46.7 6.8 79 21-100 130-209 (210)
150 3gnj_A Thioredoxin domain prot 95.1 0.046 1.6E-06 40.6 6.2 70 21-91 38-108 (111)
151 3ec3_A Protein disulfide-isome 95.1 0.083 2.8E-06 46.4 8.9 106 91-211 3-118 (250)
152 1thx_A Thioredoxin, thioredoxi 95.1 0.045 1.5E-06 40.8 6.2 69 22-91 42-111 (115)
153 3die_A Thioredoxin, TRX; elect 95.1 0.043 1.5E-06 40.3 5.9 70 21-91 35-105 (106)
154 4euy_A Uncharacterized protein 95.1 0.029 1E-06 41.8 5.0 70 21-91 34-103 (105)
155 2dj1_A Protein disulfide-isome 95.0 0.049 1.7E-06 42.5 6.5 75 21-97 50-128 (140)
156 2trx_A Thioredoxin; electron t 95.0 0.044 1.5E-06 40.6 5.9 70 21-91 36-106 (108)
157 3kcm_A Thioredoxin family prot 95.0 0.27 9.4E-06 38.5 11.0 93 113-213 28-148 (154)
158 3f3q_A Thioredoxin-1; His TAG, 95.0 0.043 1.5E-06 41.4 5.9 69 21-91 40-108 (109)
159 3m9j_A Thioredoxin; oxidoreduc 95.0 0.045 1.5E-06 40.2 5.7 69 21-91 36-104 (105)
160 2l5l_A Thioredoxin; structural 94.9 0.075 2.6E-06 41.7 7.3 70 21-91 54-124 (136)
161 2vim_A Thioredoxin, TRX; thior 94.8 0.058 2E-06 39.4 6.0 69 21-91 35-103 (104)
162 3qfa_C Thioredoxin; protein-pr 94.8 0.061 2.1E-06 41.1 6.3 69 21-91 47-115 (116)
163 2es7_A Q8ZP25_salty, putative 94.7 0.026 9E-07 45.8 4.2 76 21-97 52-129 (142)
164 1dby_A Chloroplast thioredoxin 94.7 0.086 2.9E-06 38.9 6.7 69 22-91 36-105 (107)
165 2ywm_A Glutaredoxin-like prote 94.6 0.23 7.7E-06 42.2 10.2 73 126-208 39-115 (229)
166 3erw_A Sporulation thiol-disul 94.6 0.34 1.2E-05 37.1 10.4 83 112-204 33-145 (145)
167 2l6c_A Thioredoxin; oxidoreduc 94.6 0.064 2.2E-06 40.5 5.9 68 24-92 38-105 (110)
168 2wz9_A Glutaredoxin-3; protein 94.5 0.075 2.6E-06 42.7 6.4 68 21-91 48-116 (153)
169 1mek_A Protein disulfide isome 94.5 0.058 2E-06 40.3 5.3 58 36-94 59-118 (120)
170 1w4v_A Thioredoxin, mitochondr 94.4 0.078 2.7E-06 40.5 6.1 70 21-91 47-117 (119)
171 3p2a_A Thioredoxin 2, putative 94.4 0.079 2.7E-06 42.0 6.4 69 22-91 72-141 (148)
172 2ppt_A Thioredoxin-2; thiredox 94.4 0.067 2.3E-06 43.5 6.0 70 21-91 80-150 (155)
173 3fkf_A Thiol-disulfide oxidore 94.4 0.46 1.6E-05 36.6 10.7 84 113-209 33-147 (148)
174 1syr_A Thioredoxin; SGPP, stru 94.3 0.075 2.6E-06 40.0 5.8 69 21-91 42-110 (112)
175 1v98_A Thioredoxin; oxidoreduc 94.3 0.087 3E-06 41.4 6.3 70 21-91 66-136 (140)
176 1xwb_A Thioredoxin; dimerizati 94.2 0.11 3.6E-06 38.1 6.3 68 22-91 37-105 (106)
177 1ep7_A Thioredoxin CH1, H-type 94.2 0.08 2.7E-06 39.4 5.6 69 21-91 40-109 (112)
178 1t00_A Thioredoxin, TRX; redox 94.1 0.086 2.9E-06 39.3 5.7 70 21-91 39-109 (112)
179 3ha9_A Uncharacterized thiored 94.1 0.55 1.9E-05 37.4 10.9 87 113-209 37-165 (165)
180 3hz4_A Thioredoxin; NYSGXRC, P 94.1 0.061 2.1E-06 42.5 5.1 70 21-91 40-110 (140)
181 3aps_A DNAJ homolog subfamily 94.1 0.078 2.7E-06 40.3 5.5 70 21-91 37-111 (122)
182 2qc7_A ERP31, ERP28, endoplasm 94.1 0.082 2.8E-06 47.0 6.3 46 47-92 70-118 (240)
183 2o8v_B Thioredoxin 1; disulfid 94.0 0.057 2E-06 42.3 4.6 70 21-91 56-126 (128)
184 1nsw_A Thioredoxin, TRX; therm 94.0 0.075 2.6E-06 39.1 5.0 70 21-91 33-103 (105)
185 4evm_A Thioredoxin family prot 93.9 1.2 4E-05 33.3 11.9 84 113-206 22-137 (138)
186 1r26_A Thioredoxin; redox-acti 93.8 0.11 3.7E-06 40.6 5.8 69 21-91 53-121 (125)
187 2l4c_A Endoplasmic reticulum r 93.8 0.3 1E-05 38.8 8.5 66 130-205 54-121 (124)
188 1oaz_A Thioredoxin 1; immune s 93.7 0.038 1.3E-06 43.1 3.0 55 36-91 67-121 (123)
189 1gh2_A Thioredoxin-like protei 93.7 0.13 4.4E-06 38.2 5.8 69 21-91 37-105 (107)
190 2ju5_A Thioredoxin disulfide i 93.7 0.54 1.9E-05 37.7 10.1 73 128-209 64-153 (154)
191 3lor_A Thiol-disulfide isomera 93.6 1 3.6E-05 35.2 11.6 86 114-209 31-156 (160)
192 2vlu_A Thioredoxin, thioredoxi 93.6 0.13 4.5E-06 38.9 5.9 69 21-91 50-118 (122)
193 1fb6_A Thioredoxin M; electron 93.6 0.14 4.7E-06 37.4 5.8 68 22-90 35-103 (105)
194 2fwh_A Thiol:disulfide interch 93.5 0.23 7.7E-06 38.8 7.2 63 28-91 57-126 (134)
195 2i1u_A Thioredoxin, TRX, MPT46 93.4 0.1 3.5E-06 39.4 5.0 70 21-91 46-116 (121)
196 2qsi_A Putative hydrogenase ex 93.4 0.12 4.2E-06 42.3 5.6 56 35-91 66-121 (137)
197 3d6i_A Monothiol glutaredoxin- 93.4 0.19 6.4E-06 37.5 6.3 67 22-91 38-107 (112)
198 3ga4_A Dolichyl-diphosphooligo 93.3 0.21 7.1E-06 42.5 7.2 81 14-96 55-156 (178)
199 1xfl_A Thioredoxin H1; AT3G510 93.3 0.16 5.6E-06 39.3 6.1 68 21-91 54-122 (124)
200 3iv4_A Putative oxidoreductase 93.2 0.25 8.6E-06 39.1 7.1 82 113-203 24-111 (112)
201 2c0g_A ERP29 homolog, windbeut 93.2 0.19 6.4E-06 44.9 7.1 46 47-93 82-132 (248)
202 2djk_A PDI, protein disulfide- 93.2 0.18 6E-06 39.7 6.2 70 22-91 39-113 (133)
203 2oe3_A Thioredoxin-3; electron 93.0 0.15 5.3E-06 38.8 5.4 68 21-90 46-113 (114)
204 2j23_A Thioredoxin; immune pro 93.0 0.14 4.7E-06 39.3 5.1 53 37-91 67-119 (121)
205 1z6n_A Hypothetical protein PA 92.9 0.33 1.1E-05 40.4 7.7 82 125-211 67-150 (167)
206 3eyt_A Uncharacterized protein 92.8 1.4 4.7E-05 34.5 11.1 88 113-210 28-154 (158)
207 1un2_A DSBA, thiol-disulfide i 92.8 0.026 8.8E-07 48.5 0.8 52 155-220 40-91 (197)
208 1nho_A Probable thioredoxin; b 92.8 0.15 5E-06 35.9 4.7 51 36-91 33-83 (85)
209 2qgv_A Hydrogenase-1 operon pr 92.8 0.098 3.4E-06 43.0 4.2 68 23-91 54-123 (140)
210 2vm1_A Thioredoxin, thioredoxi 92.6 0.21 7.2E-06 37.3 5.7 68 21-91 44-112 (118)
211 3hdc_A Thioredoxin family prot 92.6 2.1 7E-05 33.8 12.0 69 114-185 42-134 (158)
212 3d22_A TRXH4, thioredoxin H-ty 92.6 0.15 5.1E-06 39.8 4.9 69 21-91 62-130 (139)
213 3lwa_A Secreted thiol-disulfid 92.6 1.8 6.1E-05 35.1 11.8 89 113-208 59-181 (183)
214 2pu9_C TRX-F, thioredoxin F-ty 92.4 0.27 9.1E-06 36.6 6.0 67 21-90 40-108 (111)
215 2xc2_A Thioredoxinn; oxidoredu 92.4 0.22 7.5E-06 37.5 5.6 68 21-91 49-116 (117)
216 1ilo_A Conserved hypothetical 92.4 0.41 1.4E-05 33.0 6.6 61 127-203 14-76 (77)
217 2h30_A Thioredoxin, peptide me 92.4 1.4 4.9E-05 34.6 10.7 103 94-208 21-156 (164)
218 3fk8_A Disulphide isomerase; A 92.3 0.28 9.7E-06 37.8 6.3 69 22-90 46-130 (133)
219 1ti3_A Thioredoxin H, PTTRXH1; 92.3 0.16 5.5E-06 37.7 4.5 68 21-91 42-110 (113)
220 1fo5_A Thioredoxin; disulfide 92.2 0.11 3.8E-06 36.5 3.4 51 36-91 34-84 (85)
221 1jfu_A Thiol:disulfide interch 92.2 2.6 9E-05 34.0 12.4 92 114-211 61-183 (186)
222 3emx_A Thioredoxin; structural 92.0 0.18 6E-06 39.6 4.7 70 21-92 47-125 (135)
223 3qcp_A QSOX from trypanosoma b 91.9 1.4 4.8E-05 43.0 11.8 112 95-210 24-154 (470)
224 3hcz_A Possible thiol-disulfid 91.7 0.85 2.9E-05 35.0 8.4 46 128-176 47-119 (148)
225 1lu4_A Soluble secreted antige 91.7 0.42 1.4E-05 36.2 6.5 70 21-91 40-134 (136)
226 3fw2_A Thiol-disulfide oxidore 91.6 2.8 9.6E-05 32.6 11.5 69 127-208 50-148 (150)
227 2ywi_A Hypothetical conserved 91.4 1.2 4.2E-05 36.3 9.5 82 127-212 61-178 (196)
228 2dj3_A Protein disulfide-isome 91.3 0.19 6.4E-06 38.7 4.1 72 22-93 42-118 (133)
229 2lst_A Thioredoxin; structural 90.3 0.043 1.5E-06 42.4 0.0 73 128-210 35-118 (130)
230 1zma_A Bacterocin transport ac 90.9 0.25 8.7E-06 37.3 4.4 68 21-89 45-117 (118)
231 1zzo_A RV1677; thioredoxin fol 90.7 0.54 1.9E-05 35.4 6.3 70 21-91 41-133 (136)
232 3dxb_A Thioredoxin N-terminall 90.6 0.27 9.4E-06 42.0 4.9 71 21-92 46-117 (222)
233 1wou_A Thioredoxin -related pr 90.6 0.31 1E-05 37.5 4.7 66 22-90 48-122 (123)
234 2yj7_A LPBCA thioredoxin; oxid 89.9 0.051 1.7E-06 39.6 0.0 68 22-90 36-104 (106)
235 3ewl_A Uncharacterized conserv 90.4 2.1 7.2E-05 32.8 9.5 83 113-207 27-140 (142)
236 3cxg_A Putative thioredoxin; m 90.0 0.44 1.5E-05 37.3 5.2 55 36-91 70-127 (133)
237 3erw_A Sporulation thiol-disul 90.0 0.38 1.3E-05 36.8 4.8 69 21-89 50-145 (145)
238 1wmj_A Thioredoxin H-type; str 90.0 0.15 5E-06 39.0 2.4 67 23-91 54-120 (130)
239 1faa_A Thioredoxin F; electron 90.0 0.57 2E-05 35.5 5.8 68 21-91 53-122 (124)
240 2f51_A Thioredoxin; electron t 89.9 0.46 1.6E-05 36.2 5.1 73 21-94 39-114 (118)
241 1ilo_A Conserved hypothetical 89.9 0.53 1.8E-05 32.4 5.1 57 24-88 18-76 (77)
242 3gix_A Thioredoxin-like protei 89.8 0.61 2.1E-05 37.4 6.1 70 21-91 39-119 (149)
243 2kuc_A Putative disulphide-iso 89.7 0.8 2.7E-05 34.8 6.5 59 36-94 62-122 (130)
244 4f9z_D Endoplasmic reticulum r 89.7 1.1 3.7E-05 38.4 8.0 72 129-210 41-114 (227)
245 2djj_A PDI, protein disulfide- 89.5 0.51 1.7E-05 35.4 5.1 68 21-91 41-115 (121)
246 1kng_A Thiol:disulfide interch 89.2 4.3 0.00015 31.3 10.6 72 126-208 56-152 (156)
247 3qou_A Protein YBBN; thioredox 88.6 0.58 2E-05 41.0 5.6 70 21-92 42-113 (287)
248 3u5r_E Uncharacterized protein 88.5 3.8 0.00013 34.6 10.5 84 127-213 74-192 (218)
249 2cvb_A Probable thiol-disulfid 88.2 3.6 0.00012 33.3 9.9 83 127-212 48-163 (188)
250 2b5x_A YKUV protein, TRXY; thi 88.2 0.95 3.2E-05 34.6 6.0 71 21-91 45-143 (148)
251 3eur_A Uncharacterized protein 88.1 3.7 0.00013 31.5 9.5 78 114-204 32-141 (142)
252 1sen_A Thioredoxin-like protei 88.1 1.1 3.7E-05 36.5 6.5 93 115-209 48-149 (164)
253 2lja_A Putative thiol-disulfid 87.9 1.3 4.3E-05 34.4 6.6 71 21-91 46-141 (152)
254 3ia1_A THIO-disulfide isomeras 87.6 1.1 3.6E-05 35.1 6.0 71 21-92 46-143 (154)
255 2ju5_A Thioredoxin disulfide i 87.4 1.2 3.9E-05 35.7 6.2 55 35-90 82-149 (154)
256 2b1k_A Thiol:disulfide interch 86.5 4.7 0.00016 31.8 9.4 70 127-208 66-160 (168)
257 3kh7_A Thiol:disulfide interch 86.2 9.3 0.00032 30.8 11.3 71 127-209 73-168 (176)
258 3f9u_A Putative exported cytoc 86.2 3.6 0.00012 32.9 8.6 64 135-208 73-166 (172)
259 2fgx_A Putative thioredoxin; N 86.0 1.9 6.6E-05 33.4 6.5 65 126-203 42-106 (107)
260 2dj0_A Thioredoxin-related tra 85.5 0.14 4.9E-06 40.0 -0.3 68 21-89 42-117 (137)
261 2f9s_A Thiol-disulfide oxidore 85.5 2.5 8.5E-05 32.8 7.1 77 13-91 36-136 (151)
262 2l5o_A Putative thioredoxin; s 85.3 2.6 8.7E-05 32.6 7.1 47 45-91 93-139 (153)
263 3or5_A Thiol:disulfide interch 84.5 3.1 0.00011 32.5 7.3 71 21-91 50-149 (165)
264 1qgv_A Spliceosomal protein U5 84.4 1.4 4.6E-05 35.0 5.1 69 21-91 39-119 (142)
265 2hyx_A Protein DIPZ; thioredox 83.9 8.5 0.00029 35.7 11.1 87 113-209 82-200 (352)
266 3raz_A Thioredoxin-related pro 83.7 3.4 0.00012 32.1 7.2 72 20-91 39-138 (151)
267 2lrt_A Uncharacterized protein 83.3 7.7 0.00026 30.4 9.2 67 114-183 36-130 (152)
268 4fo5_A Thioredoxin-like protei 83.1 8.1 0.00028 29.5 9.1 79 114-205 33-142 (143)
269 3f9u_A Putative exported cytoc 82.9 3.1 0.00011 33.4 6.8 41 51-91 123-164 (172)
270 3gl3_A Putative thiol:disulfid 82.2 3.9 0.00013 31.5 6.9 72 21-92 44-141 (152)
271 1o8x_A Tryparedoxin, TRYX, TXN 81.8 14 0.00047 28.3 10.1 61 113-176 28-116 (146)
272 1ttz_A Conserved hypothetical 81.8 2.2 7.5E-05 31.4 5.0 65 128-210 15-79 (87)
273 3kp8_A Vkorc1/thioredoxin doma 81.3 2 6.8E-05 32.5 4.8 40 46-91 54-93 (106)
274 1i5g_A Tryparedoxin II; electr 81.3 14 0.00048 28.1 9.9 62 114-178 29-119 (144)
275 2av4_A Thioredoxin-like protei 81.1 1.9 6.6E-05 36.1 4.9 69 21-91 57-137 (160)
276 2fgx_A Putative thioredoxin; N 81.0 2.1 7.3E-05 33.1 4.9 48 37-88 59-106 (107)
277 3s9f_A Tryparedoxin; thioredox 79.9 13 0.00045 29.6 9.6 61 113-176 48-136 (165)
278 2lst_A Thioredoxin; structural 80.7 0.38 1.3E-05 36.8 0.0 55 37-91 55-114 (130)
279 1o73_A Tryparedoxin; electron 79.3 18 0.00062 27.3 10.3 60 114-176 29-116 (144)
280 2trc_P Phosducin, MEKA, PP33; 78.6 0.78 2.7E-05 39.6 1.8 68 23-92 138-212 (217)
281 3lor_A Thiol-disulfide isomera 78.4 4.3 0.00015 31.6 6.0 42 50-91 112-153 (160)
282 4evm_A Thioredoxin family prot 78.0 2.8 9.4E-05 31.1 4.6 46 45-90 91-136 (138)
283 2dbc_A PDCL2, unnamed protein 77.8 4.1 0.00014 31.7 5.7 68 21-92 46-120 (135)
284 3hdc_A Thioredoxin family prot 76.9 4.7 0.00016 31.6 5.9 80 13-94 51-153 (158)
285 3qcp_A QSOX from trypanosoma b 76.5 0.78 2.7E-05 44.8 1.2 58 21-78 58-125 (470)
286 2bmx_A Alkyl hydroperoxidase C 76.3 9.1 0.00031 31.3 7.8 54 156-213 117-175 (195)
287 3ha9_A Uncharacterized thiored 75.4 6.2 0.00021 31.0 6.3 69 21-91 53-162 (165)
288 2b1k_A Thiol:disulfide interch 75.1 3.9 0.00013 32.3 5.0 74 13-90 61-157 (168)
289 1kng_A Thiol:disulfide interch 74.3 4.9 0.00017 31.0 5.3 74 14-90 53-149 (156)
290 1ttz_A Conserved hypothetical 73.8 7.4 0.00025 28.5 5.9 44 42-91 32-75 (87)
291 3eyt_A Uncharacterized protein 73.7 6.5 0.00022 30.5 5.9 43 49-91 108-150 (158)
292 1ego_A Glutaredoxin; electron 73.1 9.5 0.00032 26.4 6.2 67 125-206 12-82 (85)
293 3fkf_A Thiol-disulfide oxidore 72.6 11 0.00037 28.5 6.9 67 21-90 49-143 (148)
294 3drn_A Peroxiredoxin, bacterio 72.6 22 0.00076 27.8 9.0 78 127-208 45-149 (161)
295 2rli_A SCO2 protein homolog, m 72.3 32 0.0011 26.7 10.1 31 171-208 132-164 (171)
296 3kp8_A Vkorc1/thioredoxin doma 71.1 14 0.00048 27.6 7.1 63 125-204 25-91 (106)
297 3lwa_A Secreted thiol-disulfid 71.0 11 0.00038 30.2 6.9 76 13-90 69-178 (183)
298 2h30_A Thioredoxin, peptide me 71.0 4.2 0.00014 31.8 4.2 47 45-91 108-154 (164)
299 3hcz_A Possible thiol-disulfid 70.5 7 0.00024 29.6 5.3 47 21-67 47-120 (148)
300 3dml_A Putative uncharacterize 68.4 3.3 0.00011 32.5 3.0 84 7-91 22-108 (116)
301 3fw2_A Thiol-disulfide oxidore 67.5 18 0.00061 27.8 7.2 67 21-90 51-145 (150)
302 3bj5_A Protein disulfide-isome 67.3 10 0.00036 30.3 5.9 44 48-91 78-125 (147)
303 2lrn_A Thiol:disulfide interch 66.8 11 0.00038 29.1 5.9 67 21-90 45-138 (152)
304 3evi_A Phosducin-like protein 65.6 5.4 0.00018 30.9 3.7 42 50-92 65-113 (118)
305 3kh7_A Thiol:disulfide interch 65.2 11 0.00038 30.3 5.7 73 14-90 69-164 (176)
306 2ggt_A SCO1 protein homolog, m 65.0 28 0.00096 26.8 8.0 31 171-208 129-161 (164)
307 3kcm_A Thioredoxin family prot 64.3 13 0.00045 28.4 5.8 72 20-91 43-141 (154)
308 2vup_A Glutathione peroxidase- 63.9 56 0.0019 26.3 10.5 32 171-209 153-186 (190)
309 2ywi_A Hypothetical conserved 62.7 10 0.00035 30.6 5.1 69 21-91 62-172 (196)
310 3iv4_A Putative oxidoreductase 62.0 9.4 0.00032 29.9 4.4 66 19-88 38-111 (112)
311 3ewl_A Uncharacterized conserv 61.8 15 0.00052 27.7 5.7 54 35-91 62-139 (142)
312 2ls5_A Uncharacterized protein 65.2 1.8 6E-05 34.1 0.0 49 156-213 103-153 (159)
313 1wjk_A C330018D20RIK protein; 59.6 31 0.001 25.3 6.9 65 127-208 30-96 (100)
314 2dlx_A UBX domain-containing p 59.4 18 0.00062 29.3 6.0 56 144-209 78-137 (153)
315 1a0r_P Phosducin, MEKA, PP33; 58.6 7 0.00024 34.5 3.5 69 22-92 150-225 (245)
316 3eur_A Uncharacterized protein 57.7 13 0.00046 28.2 4.7 66 21-89 47-141 (142)
317 2v1m_A Glutathione peroxidase; 57.6 56 0.0019 25.1 8.6 35 169-210 133-169 (169)
318 1xvw_A Hypothetical protein RV 56.5 65 0.0022 24.7 9.9 76 127-206 52-158 (160)
319 1jfu_A Thiol:disulfide interch 56.2 30 0.001 27.5 6.8 76 13-90 70-177 (186)
320 1we0_A Alkyl hydroperoxide red 55.8 23 0.00077 28.5 6.0 49 156-208 103-157 (187)
321 2k6v_A Putative cytochrome C o 55.5 49 0.0017 25.5 7.9 26 127-152 51-81 (172)
322 3dwv_A Glutathione peroxidase- 54.6 70 0.0024 25.6 9.0 33 171-210 151-185 (187)
323 2hyx_A Protein DIPZ; thioredox 51.3 23 0.00079 32.7 6.0 70 21-90 98-196 (352)
324 2k8s_A Thioredoxin; dimer, str 50.3 17 0.00059 25.1 3.9 46 126-174 14-61 (80)
325 1zof_A Alkyl hydroperoxide-red 50.0 22 0.00075 29.0 5.1 48 156-207 108-160 (198)
326 2dlx_A UBX domain-containing p 49.6 31 0.0011 27.9 5.9 63 25-90 68-133 (153)
327 1uul_A Tryparedoxin peroxidase 49.0 92 0.0031 25.3 8.9 76 128-207 53-164 (202)
328 3kij_A Probable glutathione pe 48.8 81 0.0028 25.0 8.3 25 127-151 53-79 (180)
329 3cmi_A Peroxiredoxin HYR1; thi 48.7 84 0.0029 24.5 8.3 22 130-151 49-72 (171)
330 2rli_A SCO2 protein homolog, m 47.2 30 0.001 26.9 5.3 42 49-90 105-161 (171)
331 1sen_A Thioredoxin-like protei 45.0 19 0.00065 28.8 3.8 54 38-91 80-146 (164)
332 3ira_A Conserved protein; meth 43.8 29 0.001 28.7 4.9 41 136-179 66-116 (173)
333 2cvb_A Probable thiol-disulfid 43.5 25 0.00084 28.2 4.3 69 21-91 49-157 (188)
334 2ggt_A SCO1 protein homolog, m 42.9 33 0.0011 26.3 4.9 42 49-90 102-158 (164)
335 3dml_A Putative uncharacterize 40.9 36 0.0012 26.5 4.7 55 144-208 53-110 (116)
336 2p5q_A Glutathione peroxidase 40.8 1.2E+02 0.0041 23.1 10.2 26 127-152 47-74 (170)
337 3s9f_A Tryparedoxin; thioredox 40.4 38 0.0013 26.8 4.9 47 21-67 64-137 (165)
338 1z6n_A Hypothetical protein PA 40.2 17 0.00059 29.7 2.9 68 21-90 70-140 (167)
339 3kp9_A Vkorc1/thioredoxin doma 39.6 19 0.00066 32.6 3.3 38 47-90 240-277 (291)
340 2lus_A Thioredoxion; CR-Trp16, 45.2 6.4 0.00022 29.8 0.0 18 156-176 99-116 (143)
341 2obi_A PHGPX, GPX-4, phospholi 38.4 88 0.003 24.8 7.0 26 127-152 62-89 (183)
342 1zye_A Thioredoxin-dependent p 37.6 1.2E+02 0.004 25.3 7.9 50 156-209 131-186 (220)
343 1o73_A Tryparedoxin; electron 37.6 43 0.0015 25.1 4.7 51 14-66 39-116 (144)
344 3gyk_A 27KDA outer membrane pr 37.2 1.5E+02 0.005 23.1 10.2 36 158-207 137-172 (175)
345 2lrt_A Uncharacterized protein 35.3 95 0.0033 23.8 6.5 47 21-67 51-122 (152)
346 1o8x_A Tryparedoxin, TRYX, TXN 34.4 61 0.0021 24.4 5.1 46 21-66 44-116 (146)
347 3u5r_E Uncharacterized protein 31.6 58 0.002 27.1 4.9 73 14-90 70-184 (218)
348 3jr7_A Uncharacterized EGV fam 31.5 2.1E+02 0.0072 25.5 8.9 113 36-153 21-138 (298)
349 2jsy_A Probable thiol peroxida 31.3 1.8E+02 0.006 22.3 10.3 90 115-207 46-166 (167)
350 1i5g_A Tryparedoxin II; electr 30.5 66 0.0022 24.1 4.7 46 21-66 44-116 (144)
351 1hyu_A AHPF, alkyl hydroperoxi 29.2 88 0.003 29.8 6.3 64 23-91 135-198 (521)
352 2l69_A Rossmann 2X3 fold prote 29.1 49 0.0017 25.4 3.5 44 128-176 36-84 (134)
353 3pl5_A SMU_165, putative uncha 28.4 1.8E+02 0.0062 26.3 8.0 105 44-152 45-156 (320)
354 1qmv_A Human thioredoxin perox 28.0 2.3E+02 0.0079 22.6 8.9 90 114-207 35-162 (197)
355 2i81_A 2-Cys peroxiredoxin; st 26.8 2.2E+02 0.0074 23.5 7.7 47 157-207 128-179 (213)
356 2k6v_A Putative cytochrome C o 26.7 50 0.0017 25.5 3.4 33 57-90 136-170 (172)
357 2gs3_A PHGPX, GPX-4, phospholi 26.2 2.3E+02 0.0079 22.3 7.6 24 128-151 65-90 (185)
358 1xzo_A BSSCO, hypothetical pro 26.0 2.2E+02 0.0075 21.7 8.7 38 168-210 135-174 (174)
359 4fo5_A Thioredoxin-like protei 26.0 1.1E+02 0.0037 22.9 5.2 66 21-89 48-141 (143)
360 3drn_A Peroxiredoxin, bacterio 25.9 1.3E+02 0.0045 23.1 5.8 46 22-67 47-119 (161)
361 3kp9_A Vkorc1/thioredoxin doma 25.5 33 0.0011 31.0 2.4 63 125-204 210-276 (291)
362 2ls5_A Uncharacterized protein 30.1 16 0.00055 28.3 0.0 31 21-51 49-83 (159)
363 2bmx_A Alkyl hydroperoxidase C 24.2 85 0.0029 25.2 4.5 47 47-93 115-170 (195)
364 3nyi_A FAT acid-binding protei 24.2 2.5E+02 0.0086 24.9 8.1 106 44-152 13-125 (297)
365 3ph9_A Anterior gradient prote 24.1 94 0.0032 24.8 4.7 33 36-69 79-111 (151)
366 2h01_A 2-Cys peroxiredoxin; th 22.8 1.6E+02 0.0056 23.4 6.0 48 156-207 106-158 (192)
367 1xvq_A Thiol peroxidase; thior 21.7 2.9E+02 0.0099 21.5 7.9 23 129-152 62-84 (175)
368 1t4y_A Adaptive-response senso 21.3 2.8E+02 0.0097 21.3 7.5 77 119-207 17-98 (105)
369 1t3b_A Thiol:disulfide interch 21.0 1.2E+02 0.0042 25.0 5.0 39 48-91 171-209 (211)
370 3gha_A Disulfide bond formatio 20.7 1.1E+02 0.0038 25.2 4.6 44 157-214 155-198 (202)
371 3gv1_A Disulfide interchange p 20.4 92 0.0031 24.7 3.9 41 47-92 98-138 (147)
372 1r7h_A NRDH-redoxin; thioredox 20.2 1.8E+02 0.0063 18.7 7.5 58 127-204 14-74 (75)
No 1
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.95 E-value=4.2e-27 Score=211.89 Aligned_cols=186 Identities=13% Similarity=0.166 Sum_probs=143.5
Q ss_pred chhHHhhhcce-eeEeeeccccHHHHhHcCCCCCCeEEEEcc------CCCCccccc--CCCCHHHHHHHHHHcCCCCee
Q 023016 27 MSPFLIQMRKF-LTLLKMLDFSEDTMVLYDFDKVPALVALQP------SYNEHNIFY--GPFDEEFLEEFIKQNFLPLSV 97 (288)
Q Consensus 27 ~~~~~~~~~k~-~~v~~~~~~seel~~~y~~~~~PsIvlfk~------~dee~~~f~--g~f~~~~L~~FI~~nslPLV~ 97 (288)
+..|.....+. -.+.++..++++++.+|+++. |+|+|||+ +|++...|+ |+++.++|++||+.+++|+|+
T Consensus 41 ~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~ 119 (250)
T 3ec3_A 41 YLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVG 119 (250)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEE
T ss_pred HHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCcee
Confidence 34455444443 334455566788899999875 89999996 577788898 579999999999999999999
Q ss_pred ecCccchhhhccccCCcEEEEEEcc-C---hhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCC-CeE
Q 023016 98 PINQDTLNLLKDDKRKIVLAIVEDE-T---EEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL-PKM 172 (288)
Q Consensus 98 e~n~et~~~l~~~~~~~~l~~lf~~-~---~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~l-Pai 172 (288)
++|++|+..++ .+.++++++++.+ . .+.++++++.++++|++||.++|+|+|+++|++.+++||+ +..+. |.+
T Consensus 120 e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~kki~F~~~d~~~~~~~l~~fgl-~~~~~~p~~ 197 (250)
T 3ec3_A 120 HRKTSNDAKRY-SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFPEYTFAIADEEDYATEVKDLGL-SESGGDVNA 197 (250)
T ss_dssp EECTTTHHHHS-CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC-SSCSCSCEE
T ss_pred ecCccchhhhh-ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhcceeEEEEcHHHHHHHHHHcCC-CccCCCcEE
Confidence 99999998732 3444444444322 2 4457889999999999999999999999999999999999 65544 688
Q ss_pred EEEe-CCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccccCCCC
Q 023016 173 VVWD-GNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPSI 221 (288)
Q Consensus 173 ~I~d-~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP~~ 221 (288)
++++ .+.||.++. +++|.++|.+||++|++||++|++||||.+
T Consensus 198 ~~~~~~~~ky~~~~------~~~t~~~i~~Fv~~~~~Gkl~p~~kSepiP 241 (250)
T 3ec3_A 198 AILDESGKKFAMEP------EEFDSDALREFVMAFKKGKLKPVIKSQPVP 241 (250)
T ss_dssp EEECTTSCEEECCC------CSCCHHHHHHHHHHHHTTCCCCCC------
T ss_pred EEEcCCCceecCCc------ccCCHHHHHHHHHHHHCCCccceeecCCCC
Confidence 8888 667998863 369999999999999999999999999753
No 2
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.95 E-value=3e-27 Score=212.66 Aligned_cols=173 Identities=16% Similarity=0.242 Sum_probs=137.8
Q ss_pred eccccHHHHhHcCCCCCCeEEEEcc------CCCCcccc-cCCCCHHHHHHHHHHcCCCCeeecCccchhhhccccCCcE
Q 023016 43 MLDFSEDTMVLYDFDKVPALVALQP------SYNEHNIF-YGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIV 115 (288)
Q Consensus 43 ~~~~seel~~~y~~~~~PsIvlfk~------~dee~~~f-~g~f~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~ 115 (288)
+...+++++.+|++++ |+|++||+ +++....| +|+++.++|.+||..+++|+|+++|.+|+.. +++.+++
T Consensus 57 ~~~~~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~--~~~~~~~ 133 (252)
T 2h8l_A 57 AHTNVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDL--IQGKDLL 133 (252)
T ss_dssp EEECCHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHH--HSSSSEE
T ss_pred EEEChHHHHHHhCCCC-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhh--hcCCCeE
Confidence 3334577888999985 99999995 56778889 9999999999999999999999999999988 5777877
Q ss_pred EEEEEccC---hhhHHHHHHHHHHHHHhcCC----cEEEEEeCcCchhHHhhcCCCCC--CCCCeEEEEe-CCceeeccC
Q 023016 116 LAIVEDET---EEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANKK--SKLPKMVVWD-GNENYLTVI 185 (288)
Q Consensus 116 l~~lf~~~---~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~~~~~~~le~fGL~k~--~~lPai~I~d-~~~KY~~~~ 185 (288)
+++++... .+..+++++.++++|++||+ ++|+|+|.++|++.+++||+ +. .++|+++|++ .+.||.+++
T Consensus 134 v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl-~~~~~~~P~v~i~~~~~~ky~~~~ 212 (252)
T 2h8l_A 134 IAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGL-ESTAGEIPVVAIRTAKGEKFVMQE 212 (252)
T ss_dssp EEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTC-CCCSCSSCEEEEECTTSCEEECCS
T ss_pred EEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCC-CCccCCCCEEEEEeCcCcEecCCc
Confidence 76654332 23356899999999999984 99999999999999999999 43 6899999998 677998743
Q ss_pred CCCCCCCCCCHHH--HHHHHHHHhcCccccccccCCC---CCCCce
Q 023016 186 GSESIDEEDQGSQ--ISRFLEGYREGRTEQKKVAGPS---IFGFVN 226 (288)
Q Consensus 186 ~~~~~~~e~t~e~--I~~Fl~~fl~Gklkp~iKSeP~---~~~~v~ 226 (288)
+++.++ |.+||++|++|+++|++||||. ..++|+
T Consensus 213 -------~~t~~~~~i~~F~~~~~~Gkl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 213 -------EFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp -------CCCTTSHHHHHHHHHHHHTCSCCCC--------------
T ss_pred -------ccCcchHHHHHHHHHHHCCCccccccCCCCCCCCCCCCC
Confidence 688888 9999999999999999999964 335554
No 3
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.93 E-value=4.9e-25 Score=195.30 Aligned_cols=176 Identities=16% Similarity=0.201 Sum_probs=148.0
Q ss_pred ccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccC----CCCHHHHHHHHHHcCCCCeeecC
Q 023016 25 PLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG----PFDEEFLEEFIKQNFLPLSVPIN 100 (288)
Q Consensus 25 ~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g----~f~~~~L~~FI~~nslPLV~e~n 100 (288)
+..+.|....+.+..+.++...+++++.+|+++. |+|++||+++++...|+| +++.++|.+||+.+++|+|+++|
T Consensus 41 ~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t 119 (227)
T 4f9z_D 41 PAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYN 119 (227)
T ss_dssp THHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECC
T ss_pred hhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC-CeEEEEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeecC
Confidence 4456677777776667778888899999999986 999999998877778874 79999999999999999999999
Q ss_pred ccchhhhccccCCcEEEEE-Ecc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCc--CchhHHhhcCCCCCCCCCeEEEE
Q 023016 101 QDTLNLLKDDKRKIVLAIV-EDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVW 175 (288)
Q Consensus 101 ~et~~~l~~~~~~~~l~~l-f~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~--~~~~~le~fGL~k~~~lPai~I~ 175 (288)
++|+.. +++.+++++++ |.+ ..++.+++++.++++|++||+ ++|+|+|++ ++++.+++||+ +..++|+++|+
T Consensus 120 ~~n~~~--~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl-~~~~~P~~~i~ 196 (227)
T 4f9z_D 120 PVTVIG--LFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKL-KESQLPALAIY 196 (227)
T ss_dssp HHHHHH--HHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTC-CGGGCSEEEEE
T ss_pred cccHHH--HhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCC-CcccCCEEEEE
Confidence 999988 55666555544 433 445688999999999999999 999999996 58889999999 66689999999
Q ss_pred e-CC-ceeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 176 D-GN-ENYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 176 d-~~-~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
+ .+ .+|.++. +++|+++|.+||++|++||
T Consensus 197 ~~~~~~ky~~~~------~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 197 QTLDDEWDTLPT------AEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp ESSSCCEEEETT------CCCCHHHHHHHHHHHHTTC
T ss_pred ECCCCccccCCc------CCCCHHHHHHHHHHHhCCC
Confidence 9 44 4787753 3699999999999999997
No 4
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.91 E-value=2.7e-23 Score=194.33 Aligned_cols=200 Identities=20% Similarity=0.229 Sum_probs=165.6
Q ss_pred hhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCeeecCccchhhh
Q 023016 28 SPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLL 107 (288)
Q Consensus 28 ~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~e~n~et~~~l 107 (288)
..|.....+.-.+.++...+.+++.+|+++. |+|++||++|++...|+|+++.++|.+||+.+++|+|+++|++|+..
T Consensus 52 ~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~-~~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~- 129 (361)
T 3uem_A 52 KQFLQAAEAIDDIPFGITSNSDVFSKYQLDK-DGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPK- 129 (361)
T ss_dssp HHHHHHHHHCSSSCEEEECCHHHHHHTTCSS-SEEEEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHH-
T ss_pred HHHHHHHhcCCCceEEEECcHHHHHHhCCCC-CeEEEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHH-
Confidence 4555555555566777778899999999986 89999999999999999999999999999999999999999999988
Q ss_pred ccccCCc-EEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCc--CchhHHhhcCCCCCCCCCeEEEEeC-C--c
Q 023016 108 KDDKRKI-VLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDG-N--E 179 (288)
Q Consensus 108 ~~~~~~~-~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~--~~~~~le~fGL~k~~~lPai~I~d~-~--~ 179 (288)
+...+. +.+++|+. ..++.+++...++++|++++| +.|+++|.+ ++++++++||+ +..++|++++++. + .
T Consensus 130 -~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi-~~~~~P~~~~~~~~~~~~ 207 (361)
T 3uem_A 130 -IFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGL-KKEECPAVRLITLEEEMT 207 (361)
T ss_dssp -HHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTC-CTTTCSEEEEEECC--CC
T ss_pred -HhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCC-CccCCccEEEEEcCCccc
Confidence 444433 33344543 445678999999999999999 999999998 68889999999 6677999999983 3 4
Q ss_pred eeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccccCCC----CCCCceEEeecchhHHH
Q 023016 180 NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPS----IFGFVNSLIGIRSVYII 237 (288)
Q Consensus 180 KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP~----~~~~v~~lVg~~~~~i~ 237 (288)
+|.++. .+++.++|.+|++++++|+++|.++|+|. ..+.++.+++.|+-.++
T Consensus 208 ky~~~~------~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~ 263 (361)
T 3uem_A 208 KYKPES------EELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVA 263 (361)
T ss_dssp EECCSS------CCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHH
T ss_pred ccCCCc------cccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhc
Confidence 887642 36899999999999999999999999864 23579999999877554
No 5
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.89 E-value=4.7e-23 Score=172.88 Aligned_cols=126 Identities=18% Similarity=0.226 Sum_probs=102.2
Q ss_pred HHHHcCCCCeeecCccchhhhccccCCcEEEEE-Ecc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeC--cCchhHHhhc
Q 023016 87 FIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIV-EDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGI--KQFADFADTF 161 (288)
Q Consensus 87 FI~~nslPLV~e~n~et~~~l~~~~~~~~l~~l-f~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~--~~~~~~le~f 161 (288)
-++.|++|||+++|++|+.. +++++++++++ |.. .+++.+++++.++++|++||| ++|+++|+ +++++.+++|
T Consensus 7 ~~~~~~~PLV~e~t~en~~~--~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~f 84 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPK--IFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFF 84 (147)
T ss_dssp --------CEEECCTTTHHH--HHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHT
T ss_pred chhhccCCeeEEeccccHHH--HhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHc
Confidence 35689999999999999998 78888888776 443 334588999999999999999 99999999 6788889999
Q ss_pred CCCCCCCCCeEEEEeC---CceeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccccCCCC
Q 023016 162 EANKKSKLPKMVVWDG---NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPSI 221 (288)
Q Consensus 162 GL~k~~~lPai~I~d~---~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP~~ 221 (288)
|+ +.+++|+++|++. +.||.++. +++++++|++||++|++|||+|++||||.+
T Consensus 85 Gl-~~~~~P~v~i~~~~~~~~Ky~~~~------~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiP 140 (147)
T 3bj5_A 85 GL-KKEECPAVRLITLEEEMTKYKPES------EELTAERITEFCHRFLEGKIKPHLMSQELP 140 (147)
T ss_dssp TC-CGGGCSEEEEEECSSSCEEECCSC------CCCCHHHHHHHHHHHHTTCSCEEECCSCCC
T ss_pred CC-CcccCCEEEEEecccccccCCCCc------ccCCHHHHHHHHHHHHcCCccccccCCCCC
Confidence 99 7778999999973 46898752 479999999999999999999999999754
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.86 E-value=2.4e-21 Score=187.88 Aligned_cols=183 Identities=15% Similarity=0.228 Sum_probs=152.1
Q ss_pred ccccHHHHhHcCCCCCCeEEEEc------cCCCCccccc-CCCCHHHHHHHHHHcCCCCeeecCccchhhhccccCCcEE
Q 023016 44 LDFSEDTMVLYDFDKVPALVALQ------PSYNEHNIFY-GPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVL 116 (288)
Q Consensus 44 ~~~seel~~~y~~~~~PsIvlfk------~~dee~~~f~-g~f~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~l 116 (288)
...+++++.+|+++. +.|++|| ++++....|+ |.++.+.|.+||..+++|+|+++|.+|+.. +++.++++
T Consensus 162 ~~~~~~~~~~~~v~~-~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~--~~~~~~~v 238 (481)
T 3f8u_A 162 HTNVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDL--IQGKDLLI 238 (481)
T ss_dssp EECCHHHHHHHCSSS-EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHH--HTTSSEEE
T ss_pred EECCHHHHHHhCCCC-CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHH--hcCCCceE
Confidence 344577888888875 4699999 6677778898 789999999999999999999999999988 67777776
Q ss_pred EEEEcc---ChhhHHHHHHHHHHHHHhcCC----cEEEEEeCcCchhHHhhcCCCC--CCCCCeEEEEe-CCceeeccCC
Q 023016 117 AIVEDE---TEEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANK--KSKLPKMVVWD-GNENYLTVIG 186 (288)
Q Consensus 117 ~~lf~~---~~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~~~~~~~le~fGL~k--~~~lPai~I~d-~~~KY~~~~~ 186 (288)
+++... .....+.+++.++++|++|++ ++|+++|.+.+++.+++||+ + ..++|+++|.+ ++.+|.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl-~~~~~~~P~~~i~~~~~~ky~~~~- 316 (481)
T 3f8u_A 239 AYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGL-ESTAGEIPVVAIRTAKGEKFVMQE- 316 (481)
T ss_dssp EEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTC-CCCTTCSCEEEEECSSSCEEECCS-
T ss_pred EEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCC-CcccCCCcEEEEEcCCCcccCCCc-
Confidence 665432 222345689999999999986 99999999999999999999 6 34899999998 567998753
Q ss_pred CCCCCCCCCHH--HHHHHHHHHhcCccccccccCCC---CCCCceEEeecchhHHH
Q 023016 187 SESIDEEDQGS--QISRFLEGYREGRTEQKKVAGPS---IFGFVNSLIGIRSVYII 237 (288)
Q Consensus 187 ~~~~~~e~t~e--~I~~Fl~~fl~Gklkp~iKSeP~---~~~~v~~lVg~~~~~i~ 237 (288)
+++.+ +|++|+++|++|+++|+++|+|. ..+.++.++|.++-.++
T Consensus 317 ------~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~ 366 (481)
T 3f8u_A 317 ------EFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIV 366 (481)
T ss_dssp ------CCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHH
T ss_pred ------ccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHh
Confidence 68888 99999999999999999999964 34689999999876544
No 7
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.86 E-value=5.4e-21 Score=181.04 Aligned_cols=166 Identities=13% Similarity=0.157 Sum_probs=131.6
Q ss_pred eeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCC-CCHHHHHHHHHHcCCCCeeecCccchhhhccccCCcEEEEEE
Q 023016 42 KMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVE 120 (288)
Q Consensus 42 ~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~-f~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~l~~lf 120 (288)
++...+++++.+|+++ .|+|++||+++++...|+|+ ++.+.|.+||..+++|+|+++|++|+..+.......+++++|
T Consensus 176 F~~~~~~~~~~~~~v~-~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~f 254 (367)
T 3us3_A 176 FFATFDSKVAKKLTLK-LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAF 254 (367)
T ss_dssp EEEECCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEEE
T ss_pred EEEECCHHHHHHcCCC-CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEEE
Confidence 3444557888899998 49999999988888899985 899999999999999999999999987632221232344455
Q ss_pred cc-ChhhHHHHHHHHHHHHHhcCC---cEEEEEeCcCchhHHh----hcCCCCCCCCCeEEEEe-C-C--ceeeccCCCC
Q 023016 121 DE-TEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFAD----TFEANKKSKLPKMVVWD-G-N--ENYLTVIGSE 188 (288)
Q Consensus 121 ~~-~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~~~~~~le----~fGL~k~~~lPai~I~d-~-~--~KY~~~~~~~ 188 (288)
.+ ..++.+++.+.|+++|++|++ ++|+|+|.+++++.++ +||+ + .++|+++|++ . + .+|.++..
T Consensus 255 ~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl-~-~~~P~~~i~~~~~~~~~~y~~~~~-- 330 (367)
T 3us3_A 255 AEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDI-D-LSAPQIGVVNVTDADSVWMEMDDE-- 330 (367)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTC-C-TTSCEEEEEETTTCCEEECCCCTT--
T ss_pred EcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCC-C-CCCCeEEEEecccccceeecCCcc--
Confidence 54 445578999999999999997 9999999999887654 4999 5 5799999999 3 3 35656430
Q ss_pred CCCCCCCHHHHHHHHHHHhcCccccc
Q 023016 189 SIDEEDQGSQISRFLEGYREGRTEQK 214 (288)
Q Consensus 189 ~~~~e~t~e~I~~Fl~~fl~Gklkp~ 214 (288)
.+++|.++|.+||++|++||++|.
T Consensus 331 --~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 331 --EDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp --SCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred --cccCCHHHHHHHHHHHHcCCcCcc
Confidence 136999999999999999999994
No 8
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=179.41 Aligned_cols=162 Identities=10% Similarity=0.142 Sum_probs=121.2
Q ss_pred HhHcCCCCCCeEEEEccC--CCCcccccCCC-CHHHHHHHHHHcCCCCeeecCccchhhhccccCCcEEEEEEccCh--h
Q 023016 51 MVLYDFDKVPALVALQPS--YNEHNIFYGPF-DEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETE--E 125 (288)
Q Consensus 51 ~~~y~~~~~PsIvlfk~~--dee~~~f~g~f-~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~--e 125 (288)
...+++++.| ++|++. ++....|+|++ +.+.|.+||..+++|+|+++|.+++.. ++..+.+++++|.... +
T Consensus 175 ~~~~~v~~~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~--~~~~~~~~~v~f~~~~~~~ 250 (382)
T 2r2j_A 175 SKPERYSGDN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEE--LTEEGLPFLILFHMKEDTE 250 (382)
T ss_dssp --------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHH--HHTTCCCEEEEEECTTCCH
T ss_pred HHhhCCCCCc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHH--HhcCCCcEEEEEecCCchH
Confidence 3445555566 677776 33567899998 899999999999999999999999988 4555667766665432 3
Q ss_pred hHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHH
Q 023016 126 KSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 204 (288)
Q Consensus 126 ~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~ 204 (288)
..+.+++.+.++|+++++ +.|+|+|.+++.+.+++||+ +..++|+++|.+.+..|.++. +.+.++.++|.+||+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl-~~~~~P~i~i~~~~~~y~~~~----~~~~~~~~~i~~F~~ 325 (382)
T 2r2j_A 251 SLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQK-TPADCPVIAIDSFRHMYVFGD----FKDVLIPGKLKQFVF 325 (382)
T ss_dssp HHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTC-CGGGCSEEEEECSSCEEECCC----SGGGGSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCC-CccCCCEEEEEcchhcCCCCc----cccccCHHHHHHHHH
Confidence 457788888999999999 99999999999999999999 667899999988444465543 123467899999999
Q ss_pred HHhcCccccccccCCCC
Q 023016 205 GYREGRTEQKKVAGPSI 221 (288)
Q Consensus 205 ~fl~Gklkp~iKSeP~~ 221 (288)
+|++|+++|++||||.+
T Consensus 326 d~~~Gkl~p~~kse~~P 342 (382)
T 2r2j_A 326 DLHSGKLHREFHHGPDP 342 (382)
T ss_dssp HHHHTTTSSCC------
T ss_pred HHHCCCccccccCCCCC
Confidence 99999999999999764
No 9
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.83 E-value=2e-19 Score=168.42 Aligned_cols=158 Identities=16% Similarity=0.227 Sum_probs=128.1
Q ss_pred cccHHHHhHcCCCCCCeEEEEccCCCCcccccCC-CCHHHHHHHHHHcCCCCeeecCccchhhhccccC---CcEEEEEE
Q 023016 45 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-FDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKR---KIVLAIVE 120 (288)
Q Consensus 45 ~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~-f~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~---~~~l~~lf 120 (288)
..+++++.+|+++ .|+|++||++++....|+|+ ++.++|.+||..+++|+|+++|.+|+.. +++. +.+++. |
T Consensus 177 ~~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~--~~~~~~~~~~~l~-f 252 (350)
T 1sji_A 177 TFDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFE--TWEDDLNGIHIVA-F 252 (350)
T ss_dssp ECCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHH--HHHSCSSSEEEEE-E
T ss_pred ECCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHH--HhcCCCCCcEEEE-E
Confidence 3457789999998 89999999988888889997 8999999999999999999999999988 4444 334433 4
Q ss_pred cc-ChhhHHHHHHHHHHHHHhcCC---cEEEEEeCcCchhHH----hhcCCCCCCCCCeEEEEe--CCceeec--cCCCC
Q 023016 121 DE-TEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA----DTFEANKKSKLPKMVVWD--GNENYLT--VIGSE 188 (288)
Q Consensus 121 ~~-~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~~~~~~l----e~fGL~k~~~lPai~I~d--~~~KY~~--~~~~~ 188 (288)
.. .+.+..++++.++++|+++++ +.|+|+|.+++++.+ ++||+ + .+.|+++|++ ++.+|.+ ++
T Consensus 253 ~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi-~-~~~P~~~i~~~~~~~~~~~~~~~--- 327 (350)
T 1sji_A 253 AERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKI-D-LFKPQIGVVNVTDADSVWMEIPD--- 327 (350)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCS-C-TTSCEEEEEESSSSCEEESCSSC---
T ss_pred EcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCC-C-ccCCcEEEEecccccccccCCCc---
Confidence 43 333457899999999999983 999999999998888 78999 5 4689999999 3447763 22
Q ss_pred CCCCCCCHHHHHHHHHHHhcCccc
Q 023016 189 SIDEEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 189 ~~~~e~t~e~I~~Fl~~fl~Gklk 212 (288)
...++++++|.+|+++|++|++.
T Consensus 328 -~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 328 -DDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp -CSCCCCHHHHHHHHHHHHTSCC-
T ss_pred -ccccCCHHHHHHHHHHHhcCccC
Confidence 02368999999999999999974
No 10
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.79 E-value=3.2e-19 Score=174.26 Aligned_cols=166 Identities=16% Similarity=0.220 Sum_probs=143.1
Q ss_pred EEEEccCCCCcccccCC-C---CHHHHHHHHHHcCCCCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHH
Q 023016 62 LVALQPSYNEHNIFYGP-F---DEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAA 137 (288)
Q Consensus 62 Ivlfk~~dee~~~f~g~-f---~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~v 137 (288)
+++||+++ +...|+|+ + +.+.|.+||..+++|+++++|.+|+.. +++.++++++++....+..+++++.++++
T Consensus 186 i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 262 (504)
T 2b5e_A 186 IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQ--YVESGLPLGYLFYNDEEELEEYKPLFTEL 262 (504)
T ss_dssp EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHH--HHHTTSCEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHH--HhcCCCcEEEEEecCcccHHHHHHHHHHH
Confidence 88999876 77789998 7 899999999999999999999999998 67778888888776666668999999999
Q ss_pred HHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEe--CCceeeccCCCCCCCCC-----------CCHHHHHHHH
Q 023016 138 ASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD--GNENYLTVIGSESIDEE-----------DQGSQISRFL 203 (288)
Q Consensus 138 Ak~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d--~~~KY~~~~~~~~~~~e-----------~t~e~I~~Fl 203 (288)
|+++++ +.|+|+|.+++++++++||+ . .++|+++|++ .+.+|.++. .++ ++.+.|.+|+
T Consensus 263 a~~~~~~i~F~~id~~~~~~~~~~~gl-~-~~~P~v~i~~~~~~~ky~~~~-----~~~~~~~~~~~~~~~~~~~l~~f~ 335 (504)
T 2b5e_A 263 AKKNRGLMNFVSIDARKFGRHAGNLNM-K-EQFPLFAIHDMTEDLKYGLPQ-----LSEEAFDELSDKIVLESKAIESLV 335 (504)
T ss_dssp HHHTTTTCEEEEEEHHHHTTHHHHTTC-C-SCSSEEEEEETTTTEEEECCC-----CCHHHHHTCCSCCCCCHHHHHHHH
T ss_pred HHhcCCeeEEEEEehhhhHHHHHHcCC-c-ccCCEEEEEeCCcCcccCCCC-----CccchhhccccccccCHHHHHHHH
Confidence 999999 99999999999999999999 4 6899999999 356887752 023 8999999999
Q ss_pred HHHhcCccccccccCCCC---CCCceEEeecchhHHH
Q 023016 204 EGYREGRTEQKKVAGPSI---FGFVNSLIGIRSVYII 237 (288)
Q Consensus 204 ~~fl~Gklkp~iKSeP~~---~~~v~~lVg~~~~~i~ 237 (288)
++++.|++.|..+|+|.+ .+.|..+.|.|+-.++
T Consensus 336 ~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v 372 (504)
T 2b5e_A 336 KDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIV 372 (504)
T ss_dssp HHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHH
T ss_pred HHHHcCCCChhhhcCCCCccccccceecccccHHHhh
Confidence 999999999999998653 3688899999876543
No 11
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.78 E-value=1e-18 Score=142.42 Aligned_cols=124 Identities=24% Similarity=0.269 Sum_probs=104.5
Q ss_pred cCCCCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 91 NFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 91 nslPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
.++|||+++|.+|+.. +.+.+.++++.|..+-.....+...|+++|++|+| +.|+++|.+++++.+++||+ ...++
T Consensus 3 c~~plv~~~t~~~f~~--~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi-~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSD--YMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNL-KTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHH--HHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTC-CSSSS
T ss_pred cccCceeccChHHHHH--HhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCC-CcccC
Confidence 5799999999999987 45566777777765434566899999999999999 99999999999999999999 66679
Q ss_pred CeEEEEeC--CceeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccccCCCCC
Q 023016 170 PKMVVWDG--NENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPSIF 222 (288)
Q Consensus 170 Pai~I~d~--~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP~~~ 222 (288)
|++++++. +++|.+.. ...++.++|.+|+++|++|+++|++||||.+.
T Consensus 80 Ptl~i~~~~~g~~~~~~~-----~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~ 129 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQ-----EKEITFEAIKAFVDDFVAGKIEPSIKSEPIPE 129 (133)
T ss_dssp SEEEEECTTTCCBCCCCS-----SSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCT
T ss_pred CEEEEEecCcCcccCCCC-----ccccCHHHHHHHHHHHHcCCcCccccCCCCCC
Confidence 99999984 67786541 13689999999999999999999999997643
No 12
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.41 E-value=1.1e-11 Score=126.87 Aligned_cols=153 Identities=14% Similarity=0.086 Sum_probs=126.5
Q ss_pred ccHHHHhHcCCCCCCeEEEEccCC-CCcccccCCCCHHHHHHHHHHcCCCCeeecCccchhhhccccCCcEEEEEEccCh
Q 023016 46 FSEDTMVLYDFDKVPALVALQPSY-NEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETE 124 (288)
Q Consensus 46 ~seel~~~y~~~~~PsIvlfk~~d-ee~~~f~g~f~~~~L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~ 124 (288)
.+.+++.+|++.. |++++|++++ +....|+|+++.+.|.+|+..+..|+|+++|.+++.. + ..+..++.++..--
T Consensus 392 ~~~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~--~-~~~~vlv~F~a~wC 467 (780)
T 3apo_A 392 SAPGICSDLYVFQ-PSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPA--S-DKEPWLVDFFAPWS 467 (780)
T ss_dssp GCHHHHHHTTCCS-CEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCT--T-CCSCEEEEEECTTC
T ss_pred CchhhHhhccccC-ChhhhccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCHHHHHH--c-CCCeEEEEEECCCC
Confidence 3577999999975 9999999987 5577899999999999999999999999999999988 4 23333443444333
Q ss_pred hhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHH
Q 023016 125 EKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFL 203 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl 203 (288)
..-..+...++++|+++++ +.|+.+|.++++.+++.||+ ..+|++++++++.+|.+.+ ..+.++|.+|+
T Consensus 468 ~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~g-------~~~~~~l~~fi 537 (780)
T 3apo_A 468 PPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNI---QAYPTTVVFNQSSIHEYEG-------HHSAEQILEFI 537 (780)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEEEETTEEEEECS-------CSCHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC---CcCCeEEEEcCCceeeecC-------cccHHHHHHHH
Confidence 4566899999999999998 99999999999899999999 3599999998666676654 57999999999
Q ss_pred HHHhcCccc
Q 023016 204 EGYREGRTE 212 (288)
Q Consensus 204 ~~fl~Gklk 212 (288)
++++++.+.
T Consensus 538 ~~~~~~~v~ 546 (780)
T 3apo_A 538 EDLRNPSVV 546 (780)
T ss_dssp HHHHSCSEE
T ss_pred Hhhccccee
Confidence 999986543
No 13
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.14 E-value=1.3e-09 Score=94.75 Aligned_cols=174 Identities=11% Similarity=0.125 Sum_probs=125.0
Q ss_pred HhhcccchhHHhhhcc----eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCC--
Q 023016 21 RNLLPLMSPFLIQMRK----FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP-- 94 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k----~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslP-- 94 (288)
|.+.|.+..+....+. +..+.+-.+-..+++.+|++.+.|++++|++ ++...|.|..+.+.|.+||....-|
T Consensus 48 ~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~--g~~~~~~g~~~~~~l~~~i~~~~~~~~ 125 (241)
T 3idv_A 48 KQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKK--GQAVDYEGSRTQEEIVAKVREVSQPDW 125 (241)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCSCHHHHHHHHHHHHSTTC
T ss_pred HHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcC--CCcccccCcccHHHHHHHHhhccCccc
Confidence 4455555555443332 6666677777789999999999999999984 4455688999999999999987554
Q ss_pred -----CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC----cEEEEEeCcCchhHHhhcCCC
Q 023016 95 -----LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEAN 164 (288)
Q Consensus 95 -----LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~~~~~~~le~fGL~ 164 (288)
.+..++.+++..+ ...+.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.+....+.+.||+
T Consensus 126 ~~~~~~~~~~~~~~~~~~--~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v- 202 (241)
T 3idv_A 126 TPPPEVTLVLTKENFDEV--VNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDV- 202 (241)
T ss_dssp CCCCCSSEECCTTTHHHH--HHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTC-
T ss_pred ccccccceeccHHHHHHh--hccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCC-
Confidence 4666777777763 2223344444443 212234555677777777653 99999999988889999999
Q ss_pred CCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 165 KKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 165 k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
..+|++++++++....+.+ ..+.++|.+|+++...
T Consensus 203 --~~~Pt~~~~~~g~~~~~~g-------~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 203 --SGYPTLKIFRKGRPYDYNG-------PREKYGIVDYMIEQSG 237 (241)
T ss_dssp --CSSSEEEEEETTEEEECCS-------CCSHHHHHHHHHHHTT
T ss_pred --cccCEEEEEECCeEEEecC-------CCCHHHHHHHHHhhhC
Confidence 4799999998655444443 5799999999998654
No 14
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.00 E-value=1.2e-08 Score=104.41 Aligned_cols=179 Identities=10% Similarity=0.050 Sum_probs=128.8
Q ss_pred hhcccchhHHhhhcceeeEe-eeccccHHHHhHcCCCCCCeEEEEccCCC---CcccccC-CCCHHHHHHHHHHcCCCCe
Q 023016 22 NLLPLMSPFLIQMRKFLTLL-KMLDFSEDTMVLYDFDKVPALVALQPSYN---EHNIFYG-PFDEEFLEEFIKQNFLPLS 96 (288)
Q Consensus 22 ~~~~~~~~~~~~~~k~~~v~-~~~~~seel~~~y~~~~~PsIvlfk~~de---e~~~f~g-~f~~~~L~~FI~~nslPLV 96 (288)
.+.|.+...-...+.-..++ +--+....++..|++++.|+|++|++... ....|+| ..+.++|.+||....-|.+
T Consensus 580 ~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v 659 (780)
T 3apo_A 580 VLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQAS 659 (780)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCS
T ss_pred HhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhccccc
Confidence 45555555444444333333 33344567889999999999999997543 2456889 7899999999999999999
Q ss_pred eecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEE
Q 023016 97 VPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 97 ~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I 174 (288)
.+++.+++... ....+.++++.|.. .-..-..+...++++|+++++ +.|+.+|.++++..++.||+ ..+|++++
T Consensus 660 ~~l~~~~~~~~-~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~ 735 (780)
T 3apo_A 660 IDLTPQTFNEK-VLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSVKL 735 (780)
T ss_dssp EEECHHHHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred ccCCHHHHHHH-HhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCC---CcCCEEEE
Confidence 99999888642 22333444444443 223456788899999999998 99999999999888999999 57999988
Q ss_pred Ee-CCceeeccCCCCCCC--CCCCHHHHHHHHHHHhcC
Q 023016 175 WD-GNENYLTVIGSESID--EEDQGSQISRFLEGYREG 209 (288)
Q Consensus 175 ~d-~~~KY~~~~~~~~~~--~e~t~e~I~~Fl~~fl~G 209 (288)
+. +.....+.+ . ...+.++|.+|++..++.
T Consensus 736 ~~~g~~~~~~~G-----~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 736 YQYERAKKSIWE-----EQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EEEETTTTEEEE-----EEECCCCHHHHHHHHHHHTTC
T ss_pred EcCCCccccccC-----cccCCcCHHHHHHHHHHHHHH
Confidence 87 332211221 0 146899999999998864
No 15
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.3e-08 Score=93.77 Aligned_cols=174 Identities=16% Similarity=0.214 Sum_probs=117.8
Q ss_pred HhhcccchhHHhhhcc-eeeEeeecc--ccHHHHhHcCCCCCCeEEEEccCC----------------CCcccccCCCCH
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKMLD--FSEDTMVLYDFDKVPALVALQPSY----------------NEHNIFYGPFDE 81 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~~--~seel~~~y~~~~~PsIvlfk~~d----------------ee~~~f~g~f~~ 81 (288)
+.+.|.+..+...... +..+.+-.+ -..+++..|++.+.|++++|++.. .....|.|..+.
T Consensus 51 ~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~ 130 (298)
T 3ed3_A 51 KKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTL 130 (298)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSH
T ss_pred HHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCH
Confidence 5566776666655544 333333333 458999999999999999999632 024578999999
Q ss_pred HHHHHHHHHcCCCCeeecCc-cchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHH-
Q 023016 82 EFLEEFIKQNFLPLSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFA- 158 (288)
Q Consensus 82 ~~L~~FI~~nslPLV~e~n~-et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~l- 158 (288)
+.|.+||....-|.+..++. +.+..+... ...+.+++|.... .....|+++|..+++ +.|+.++..+-....
T Consensus 131 ~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~-~~~~~vi~fs~~~----~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~ 205 (298)
T 3ed3_A 131 APIVDFSLSRIRSYVKKFVRIDTLGSLLRK-SPKLSVVLFSKQD----KISPVYKSIALDWLGKFDFYSISNKKLKQLTD 205 (298)
T ss_dssp HHHHHHHHTTCCCCEEECSCGGGHHHHHTS-CSSEEEEEEESSS----SCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCT
T ss_pred HHHHHHHHHhcccccEEcCCHHHHHHHHhc-CCceEEEEEcCCC----cchHHHHHHHHHhhcCcEEEEEcchHhhhhhh
Confidence 99999999999999999964 556552111 2345555664332 234689999999999 999999866332222
Q ss_pred -hhcCCC---------------CCCCCCeEEEEe-CCce-eeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 159 -DTFEAN---------------KKSKLPKMVVWD-GNEN-YLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 159 -e~fGL~---------------k~~~lPai~I~d-~~~K-Y~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
+.|+.. ...+.|++++++ .+++ +.+++ +.++.+.|.+|+.+
T Consensus 206 ~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g------~~~~~~~i~~fi~~ 264 (298)
T 3ed3_A 206 MNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEG------NSINKNDISKFLRD 264 (298)
T ss_dssp TCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCC------SSCCHHHHHHHHHH
T ss_pred hhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEecc------ccCCHHHHHHHHHh
Confidence 233310 114689999998 3444 34442 35899999999986
No 16
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.95 E-value=2.3e-08 Score=86.90 Aligned_cols=177 Identities=15% Similarity=0.094 Sum_probs=123.3
Q ss_pred HHhhcccchhHHhhh---cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcC--CC
Q 023016 20 LRNLLPLMSPFLIQM---RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF--LP 94 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~---~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ns--lP 94 (288)
.+.++|.+...-... .++..+-+--+-..+++.+|++++.|++++|+. ......|.|..+.+.|.+|+.... -+
T Consensus 40 c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~-~~~~~~~~G~~~~~~l~~~~~~~~~~~~ 118 (229)
T 2ywm_A 40 AEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGD-KDYGIRYIGLPAGLEFTTLINGIFHVSQ 118 (229)
T ss_dssp HHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESS-SCCCEEEESCCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECC-CcccceecCCccHHHHHHHHHHHHhccC
Confidence 566777766653222 345544444455789999999999999999984 234456888888888999988742 13
Q ss_pred CeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I 174 (288)
.+.+++.+++..+...+.+..++.+....-..-..+...++++|+.+.++.|+.+|.+.++...+.+|+ ..+|++++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~ 195 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQDLAEQFQV---VGVPKIVI 195 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGCHHHHHHTTC---CSSSEEEE
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHHcCC---cccCEEEE
Confidence 467778888776432222222333333322345677888999999995599999999988889999999 57999998
Q ss_pred EeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 175 WDGNENYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 175 ~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
++. ...+.+ ..+.++|.+|++..++.
T Consensus 196 -~G~-~~~~~G-------~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 196 -NKG-VAEFVG-------AQPENAFLGYIMAVYEK 221 (229)
T ss_dssp -GGG-TEEEES-------CCCHHHHHHHHHHHHHH
T ss_pred -CCE-EEEeeC-------CCCHHHHHHHHHHHhhh
Confidence 532 222333 47889999999988753
No 17
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.95 E-value=1.7e-08 Score=87.26 Aligned_cols=177 Identities=13% Similarity=0.100 Sum_probs=118.2
Q ss_pred HhhcccchhHHhhhcceeeEeeeccc--cHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCC--CCe
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDF--SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFL--PLS 96 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~--seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nsl--PLV 96 (288)
+.+.|.+..+-....++..+-+--+- ..+++..|++.+.|++++|+...+....|.|....+.+..|+....- ...
T Consensus 39 ~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~ 118 (226)
T 1a8l_A 39 DQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREE 118 (226)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcHHHHHHHHHHHHhhcCCC
Confidence 44555555543333445444444444 57899999999999999997533223467787777888888877311 124
Q ss_pred eecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcC----C-cEEEEEeCcCchhHHhhcCCCCCCCCCe
Q 023016 97 VPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANR----E-LVFCYVGIKQFADFADTFEANKKSKLPK 171 (288)
Q Consensus 97 ~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~r----g-l~Fv~VD~~~~~~~le~fGL~k~~~lPa 171 (288)
..++.+++..+...+.+..++.+....-..-......+.++|+.++ + +.|+.+|.+.++...+.||+ ..+|+
T Consensus 119 ~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 195 (226)
T 1a8l_A 119 TNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNV---MAVPK 195 (226)
T ss_dssp CCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTC---CSSCE
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCC---cccCe
Confidence 4567777666433333332333333322344577788899999987 4 99999999988888999999 57899
Q ss_pred EEEEeCC-ceeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 172 MVVWDGN-ENYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 172 i~I~d~~-~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++++.++ ....+.+ ..+.+++.+|++..+
T Consensus 196 ~~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 196 IVIQVNGEDRVEFEG-------AYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEEETTEEEEEEES-------CCCHHHHHHHHHHHH
T ss_pred EEEEeCCceeEEEcC-------CCCHHHHHHHHHHhh
Confidence 9888743 3333433 468889999998865
No 18
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.91 E-value=3.3e-08 Score=92.04 Aligned_cols=159 Identities=14% Similarity=0.105 Sum_probs=115.4
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCeeecC-ccchhhhccccCCc
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPIN-QDTLNLLKDDKRKI 114 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~e~n-~et~~~l~~~~~~~ 114 (288)
++..+.|--+-..+++.+|++.+.|++++|++ ++...|.|..+.+.|.+||....-|.+.+++ .+.+..+...+.+.
T Consensus 67 ~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~--g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 144 (350)
T 1sji_A 67 DIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKG--DRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQI 144 (350)
T ss_dssp SEEEEEEETTTTHHHHHHHTCCSTTEEEEEET--TEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSC
T ss_pred CcEEEEEeCCCCHHHHHhcCCCccceEEEEEC--CcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCc
Confidence 46666566666789999999999999999985 3355789999999999999999999999996 45555521112334
Q ss_pred EEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeC-Cc-eeeccCCCCCCC
Q 023016 115 VLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG-NE-NYLTVIGSESID 191 (288)
Q Consensus 115 ~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~-~~-KY~~~~~~~~~~ 191 (288)
.++.++.+.. ......+.++|+.+++ +.|+.+... .+++.+|+ + .|+++++.. +. ...+.+
T Consensus 145 ~vv~ff~~~~---~~~~~~~~~~A~~~~~~~~f~~~~~~---~~~~~~~v-~---~p~i~~~~~~~~~~~~y~g------ 208 (350)
T 1sji_A 145 KLIGFFKSEE---SEYYKAFEEAAEHFQPYIKFFATFDK---GVAKKLSL-K---MNEVDFYEPFMDEPIAIPD------ 208 (350)
T ss_dssp EEEEECSCTT---SHHHHHHHHHHHHTTTTSEEEEECCH---HHHHHHTC-C---TTCEEEECTTCSSCEECSS------
T ss_pred EEEEEECCCC---cHHHHHHHHHHHhhccCcEEEEECCH---HHHHHcCC-C---CCcEEEEeCCCCCceecCC------
Confidence 4333333321 2445789999999999 999998543 57888999 3 799999883 33 223332
Q ss_pred CCCCHHHHHHHHHHHhcCccc
Q 023016 192 EEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 192 ~e~t~e~I~~Fl~~fl~Gklk 212 (288)
+..+.++|.+|++....+.+.
T Consensus 209 ~~~~~~~l~~fi~~~~~p~v~ 229 (350)
T 1sji_A 209 KPYTEEELVEFVKEHQRPTLR 229 (350)
T ss_dssp SSCCHHHHHHHHHHHCCCSEE
T ss_pred CCCCHHHHHHHHHHcCccchh
Confidence 137999999999997765543
No 19
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.79 E-value=7.9e-08 Score=90.53 Aligned_cols=158 Identities=15% Similarity=0.113 Sum_probs=114.6
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCeeecCc-cchhhhccccCCc
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQ-DTLNLLKDDKRKI 114 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~e~n~-et~~~l~~~~~~~ 114 (288)
++...-|--+-..+++.+|++.+.|++++|++ ++...|.|..+.+.|.+||....-|.+.+++. +.+..+...+...
T Consensus 69 ~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~--G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~ 146 (367)
T 3us3_A 69 GVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKE--DEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEI 146 (367)
T ss_dssp TEEEEEEETTTTHHHHHHHTCCSTTEEEEEET--TEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSC
T ss_pred CceEEEEeCcccHHHHHHcCCCcCceEEEEEC--CcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCc
Confidence 34444455556689999999999999999995 34567999999999999999999999999964 5666521212344
Q ss_pred EEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeC--CceeeccCCCCCCC
Q 023016 115 VLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG--NENYLTVIGSESID 191 (288)
Q Consensus 115 ~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~--~~KY~~~~~~~~~~ 191 (288)
.++.+|.+.. ......|.++|..+++ +.|+.+... .+++.+|+ + .|+++++.. +....+.+
T Consensus 147 ~vv~ff~~~~---~~~~~~f~~~A~~~~~~~~F~~~~~~---~~~~~~~v-~---~p~i~lf~~~~~~~~~y~g------ 210 (367)
T 3us3_A 147 KLIGYFKNKD---SEHYKAFKEAAEEFHPYIPFFATFDS---KVAKKLTL-K---LNEIDFYEAFMEEPVTIPD------ 210 (367)
T ss_dssp EEEEECSCTT---CHHHHHHHHHHHHHTTTSCEEEECCH---HHHHHHTC-C---TTCEEEECTTCSSCEECSS------
T ss_pred EEEEEECCCC---chHHHHHHHHHHhhcCCcEEEEECCH---HHHHHcCC-C---CCeEEEEcCCCCCCeecCC------
Confidence 4443443322 2566789999999998 999998654 57788999 4 399998873 33333433
Q ss_pred CCCCHHHHHHHHHHHhcCcc
Q 023016 192 EEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 192 ~e~t~e~I~~Fl~~fl~Gkl 211 (288)
+..+.+.|.+|++...-..+
T Consensus 211 ~~~~~~~l~~fi~~~~~p~v 230 (367)
T 3us3_A 211 KPNSEEEIVNFVEEHRRSTL 230 (367)
T ss_dssp SSCCHHHHHHHHHHTCSCSE
T ss_pred CCCCHHHHHHHHHHcCccce
Confidence 24799999999999765543
No 20
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.64 E-value=1.5e-06 Score=80.46 Aligned_cols=146 Identities=11% Similarity=0.122 Sum_probs=104.1
Q ss_pred cHHHHhHcCCCC--CCeEEEEccCCCCccccc---CCCCHHHHHHHHHHcC------------C------CCeeecCccc
Q 023016 47 SEDTMVLYDFDK--VPALVALQPSYNEHNIFY---GPFDEEFLEEFIKQNF------------L------PLSVPINQDT 103 (288)
Q Consensus 47 seel~~~y~~~~--~PsIvlfk~~dee~~~f~---g~f~~~~L~~FI~~ns------------l------PLV~e~n~et 103 (288)
...++..|+++. .|++++|+... ....|. |.++.+.|.+|+.... + ..+..++.++
T Consensus 180 ~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~ 258 (361)
T 3uem_A 180 NQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN 258 (361)
T ss_dssp GHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT
T ss_pred HHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc
Confidence 578899999987 99999998632 222343 6799999999998831 1 1367778888
Q ss_pred hhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC---cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEe-C-
Q 023016 104 LNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD-G- 177 (288)
Q Consensus 104 ~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d-~- 177 (288)
+..+.. ..+.++++.|+. --..-..+...++++|+.+++ +.|+.+|...+. ++.+++ ..+|+++++. +
T Consensus 259 f~~~~~-~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v---~~~Pt~~~~~~~~ 332 (361)
T 3uem_A 259 FEDVAF-DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKV---HSFPTLKFFPASA 332 (361)
T ss_dssp HHHHHT-CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCC---CSSSEEEEECSSS
T ss_pred hhhhcc-cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCC---cccCeEEEEECCC
Confidence 776322 233444444543 334567888999999999987 999999998665 567888 5789999996 4
Q ss_pred Cc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 178 NE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 178 ~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
+. ...+.+ ..+.++|.+|++.-
T Consensus 333 ~~~~~~~~G-------~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 333 DRTVIDYNG-------ERTLDGFKKFLESG 355 (361)
T ss_dssp SCCCEECCS-------CSSHHHHHHHHTTT
T ss_pred CcceeEecC-------CCCHHHHHHHHHhc
Confidence 22 234433 57999999999853
No 21
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.63 E-value=5.2e-07 Score=86.97 Aligned_cols=174 Identities=13% Similarity=0.208 Sum_probs=121.4
Q ss_pred HhhcccchhHHhhhcc-eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCeeec
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPI 99 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~e~ 99 (288)
+.+.|.+...-...+. +..+.+--+-..+++.+|++.+.|++++|++. +....|.|..+.+.|.+|+....-|.+.++
T Consensus 37 ~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g-~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i 115 (481)
T 3f8u_A 37 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDG-EEAGAYDGPRTADGIVSHLKKQAGPASVPL 115 (481)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEEEETT-EEEEECCSCSSHHHHHHHHHHHTSCSEEEE
T ss_pred HHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEEEeCC-ceeeeecCccCHHHHHHHHHhhcccCceec
Confidence 5667777666655544 44555566667899999999999999999853 234568999999999999999999999999
Q ss_pred Cc-cchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEe-
Q 023016 100 NQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD- 176 (288)
Q Consensus 100 n~-et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d- 176 (288)
+. +.+..+ ....+..++.++.+.. ......|.++|..+++ +.|+.+... .+++.+|+ + ..| ++++.
T Consensus 116 ~~~~~~~~~-~~~~~~~vv~~~~~~~---~~~~~~f~~~a~~~~~~~~F~~~~~~---~~~~~~~v-~--~~~-i~~~~p 184 (481)
T 3f8u_A 116 RTEEEFKKF-ISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTNVE---SLVNEYDD-N--GEG-IILFRP 184 (481)
T ss_dssp CSHHHHHHH-TTSSSCEEEEEESCTT---CHHHHHHHHHHHHHTTTSCEEEECCH---HHHHHHCS-S--SEE-EEEECC
T ss_pred CCHHHHHHH-HhcCCcEEEEEECCCc---cchHHHHHHHHHHhccCceEEEECCH---HHHHHhCC-C--CCc-EEEEec
Confidence 54 455542 1223344433443322 2567889999999999 999988654 56788898 3 233 66664
Q ss_pred -------CCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCccc
Q 023016 177 -------GNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 177 -------~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklk 212 (288)
.+....+.+ ..++.+.|.+|++...-..+.
T Consensus 185 ~~~~~~~~~~~~~y~~------~~~~~~~l~~fi~~~~~p~v~ 221 (481)
T 3f8u_A 185 SHLTNKFEDKTVAYTE------QKMTSGKIKKFIQENIFGICP 221 (481)
T ss_dssp GGGCBTTBCSEEECCC------SSCCHHHHHHHHHHHTTTTSC
T ss_pred ccccCccCCcccccCC------CCCCHHHHHHHHHHhCCCCcc
Confidence 112233331 358999999999998766543
No 22
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.40 E-value=3.8e-06 Score=79.12 Aligned_cols=169 Identities=11% Similarity=0.038 Sum_probs=104.4
Q ss_pred HhhcccchhHHhhh-------cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcc--cccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQM-------RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHN--IFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~-------~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~--~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+...-... .++..+.+--+-..+++.+|++.+.|++++|+. ++.. .|.|..+.+.|.+||...
T Consensus 38 ~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~--G~~~~~~~~G~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 38 QMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRN--GMMMKREYRGQRSVKALADYIRQQ 115 (382)
T ss_dssp HHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEET--TEEEEEECCSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeC--CcEeeeeecCcchHHHHHHHHHHh
Confidence 55667666554443 235555566666789999999999999999984 3332 589999999999999999
Q ss_pred CCCCeeecCc-cchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 92 FLPLSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 92 slPLV~e~n~-et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
.-|.+.+++. +.+..+ ......++.++.+.. ....+.|+++|..+++ +.|+.+..+ +...+++ ...
T Consensus 116 ~~~~v~~l~~~~~l~~l--~~~~~~~v~ff~~~~---~~~~~~f~~~A~~~~~~~~F~~~~~~----~~~~~~v---~~~ 183 (382)
T 2r2j_A 116 KSDPIQEIRDLAEITTL--DRSKRNIIGYFEQKD---SDNYRVFERVANILHDDCAFLSAFGD----VSKPERY---SGD 183 (382)
T ss_dssp HSCCCEEC--------------CCEEEEEESCSS---SHHHHHHHHHHHHHTTTCEEEEEESC----C-----------C
T ss_pred ccCCceecCCHHHHHHh--cCCCCEEEEEECCCC---ChhHHHHHHHHHHhhccceEEEEehh----hHHhhCC---CCC
Confidence 9999999864 344442 223333343443322 1346789999999999 888887653 3455677 245
Q ss_pred CeEEEEeC--C-ceeeccCCCCCCCCCC-CHHHHHHHHHHHhcCcc
Q 023016 170 PKMVVWDG--N-ENYLTVIGSESIDEED-QGSQISRFLEGYREGRT 211 (288)
Q Consensus 170 Pai~I~d~--~-~KY~~~~~~~~~~~e~-t~e~I~~Fl~~fl~Gkl 211 (288)
| ++.... + ....+.+ ++ +.+.|.+|++...-..+
T Consensus 184 p-i~~~~~~~~~~~~~y~g-------~~~~~~~l~~fi~~~~~p~v 221 (382)
T 2r2j_A 184 N-IIYKPPGHSAPDMVYLG-------AMTNFDVTYNWIQDKCVPLV 221 (382)
T ss_dssp E-EEEECSSSSSCCEECCS-------CTTCHHHHHHHHHHHHSCSS
T ss_pred c-eEECCCCCCCcCcccCC-------CCCCHHHHHHHHHhcccCce
Confidence 7 544432 1 2233433 46 89999999998765443
No 23
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.37 E-value=1.8e-05 Score=70.31 Aligned_cols=156 Identities=14% Similarity=0.120 Sum_probs=104.1
Q ss_pred eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc----CCCCeeecCccchhhhccccC
Q 023016 37 FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN----FLPLSVPINQDTLNLLKDDKR 112 (288)
Q Consensus 37 ~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n----slPLV~e~n~et~~~l~~~~~ 112 (288)
+..+-+-.+-..++++.|++++.|++.+|. + ...|.|....+.+..|+... .-| ..++.++...+.....
T Consensus 65 v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~~---g-~~~~~G~~~~~~l~~fv~~~l~~~~~~--~~l~~~~~~~~~~~~~ 138 (243)
T 2hls_A 65 LKLNVYYRESDSDKFSEFKVERVPTVAFLG---G-EVRWTGIPAGEEIRALVEVIMRLSEDE--SGLEDATKEALKSLKG 138 (243)
T ss_dssp EEEEEEETTTTHHHHHHTTCCSSSEEEETT---T-TEEEESCCCTTHHHHHHHHHHHHHTTC--CCCCHHHHHHHHHCCS
T ss_pred eEEEEecCCcCHHHHHhcCCCcCCEEEEEC---C-ceeEcCCCcHHHHHHHHHHHHhccCCC--CCCCHHHHHHHHHcCC
Confidence 443333344557899999999999999983 2 45677766667788887762 222 2345555544322223
Q ss_pred CcEEEEEEccChhhHHHHHHHHHHHHHhc-----CCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCC
Q 023016 113 KIVLAIVEDETEEKSQKLVTTLKAAASAN-----RELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGS 187 (288)
Q Consensus 113 ~~~l~~lf~~~~e~~e~~~~~l~~vAk~~-----rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~ 187 (288)
+..+..+....=..-......+.++|..+ .++.|..+|.+.++...+.+|+ ..+|++++ ++... +.+
T Consensus 139 ~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V---~~vPt~~i-~G~~~--~~G-- 210 (243)
T 2hls_A 139 RVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGV---MSVPSIAI-NGYLV--FVG-- 210 (243)
T ss_dssp CEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTC---CSSSEEEE-TTEEE--EES--
T ss_pred CcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCC---eeeCeEEE-CCEEE--EeC--
Confidence 33333333332234567888899999988 3499999999998888888999 47999988 43222 333
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 188 ESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 188 ~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
..+.++|.+|++..+...+
T Consensus 211 -----~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 211 -----VPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp -----CCCHHHHHHHHHHHHTTCC
T ss_pred -----CCCHHHHHHHHHHHhhccc
Confidence 4689999999999886533
No 24
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.35 E-value=7.4e-06 Score=79.53 Aligned_cols=165 Identities=12% Similarity=0.102 Sum_probs=114.4
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCC-cccccCCCCHHHHHHHHHHcCCCCee
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQNFLPLSV 97 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee-~~~f~g~f~~~~L~~FI~~nslPLV~ 97 (288)
+.+.|.+..+-...+ ++..+.+--+-..+++.+|++.+.|++++|++.... ...|.|..+.+.|.+||....-|.+.
T Consensus 47 ~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~ 126 (504)
T 2b5e_A 47 KNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVA 126 (504)
T ss_dssp HHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEE
T ss_pred HHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCCcce
Confidence 566777766655554 366666666777899999999999999999863211 55689999999999999999999999
Q ss_pred ecCccchhhhccccCC--cEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEE
Q 023016 98 PINQDTLNLLKDDKRK--IVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 98 e~n~et~~~l~~~~~~--~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I 174 (288)
+++. +..+.. ... .+++.+|.+.. ......|+++|..+|+ +.|+.++ .+++.+|+ + +++
T Consensus 127 ~i~~--~~~~~~-~~~~~~~~v~~f~~~~---~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~-~------i~l 188 (504)
T 2b5e_A 127 VVAD--LPAYLA-NETFVTPVIVQSGKID---ADFNATFYSMANKHFNDYDFVSAE-----NADDDFKL-S------IYL 188 (504)
T ss_dssp ECSC--HHHHHH-HSCCSSCEEEEEESCC---HHHHHHHHHHHHHTTTTCEEEEEE-----CTTSCCEE-E------EEE
T ss_pred eHHH--HHHHHh-cCCCceEEEEEeCCCC---chHHHHHHHHHHHhhcCcEEEEEH-----HHHHhcCC-e------EEe
Confidence 9987 444211 123 44444554422 2456789999999999 9999887 24455666 2 555
Q ss_pred EeC-CceeeccCCCCCCCCC-C---CHHHHHHHHHHHhcCc
Q 023016 175 WDG-NENYLTVIGSESIDEE-D---QGSQISRFLEGYREGR 210 (288)
Q Consensus 175 ~d~-~~KY~~~~~~~~~~~e-~---t~e~I~~Fl~~fl~Gk 210 (288)
+.. +....+.+ + + +.+.|.+|+....-..
T Consensus 189 ~~~~~~~~~~~g-------~~~~~~~~~~l~~fi~~~~~p~ 222 (504)
T 2b5e_A 189 PSAMDEPVVYNG-------KKADIADADVFEKWLQVEALPY 222 (504)
T ss_dssp TTEEEEEEECCS-------CHHHHTSHHHHHHHHHHHSSCS
T ss_pred cCCCCcccccCC-------cccccCCHHHHHHHHHhcccCC
Confidence 542 22222322 3 4 8889999998765543
No 25
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.09 E-value=4.8e-05 Score=57.08 Aligned_cols=102 Identities=9% Similarity=0.126 Sum_probs=76.6
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCe
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 171 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPa 171 (288)
+.+..+|.+++..+ ...+.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.+......+.||+ ..+|+
T Consensus 4 ~~v~~l~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~Pt 78 (109)
T 3tco_A 4 DVTLVLTEENFDEV--IRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSV---LNIPT 78 (109)
T ss_dssp CCCEECCTTTHHHH--HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CeEEEecHHHHHHH--HhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCc---ccCCE
Confidence 56778888888773 2234444444443 335567888999999999998 99999999999899999999 57899
Q ss_pred EEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 172 MVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 172 i~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++++.++. .+.+.+ ..+.+++.+|++.++
T Consensus 79 ~~~~~~g~~~~~~~g-------~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 79 TLIFVNGQLVDSLVG-------AVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEEETTEEEEEEES-------CCCHHHHHHHHHHHC
T ss_pred EEEEcCCcEEEeeec-------cCCHHHHHHHHHHHh
Confidence 99887443 333333 468999999999875
No 26
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.08 E-value=2.2e-06 Score=69.41 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=49.3
Q ss_pred hhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccC----CCCHHHHHHHHHHcCC
Q 023016 28 SPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG----PFDEEFLEEFIKQNFL 93 (288)
Q Consensus 28 ~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g----~f~~~~L~~FI~~nsl 93 (288)
..|.....+...+.++..++++++.+|+++ .|+|+|||+++++...|+| +++.++|++||..|++
T Consensus 56 ~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~-~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 56 PILHSMVQKFPGVSFGISTDSEVLTHYNIT-GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp HHHHHHHHHCTTSEEEEECCHHHHHHTTCC-SSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCceEEEEChHHHHHHcCCC-CCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 334443444444444444567899999998 6899999999988888986 7999999999999875
No 27
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.08 E-value=4.7e-05 Score=60.80 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=67.0
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
+.+.+++.+++..... ..+..++++....-..-..+...+.++|+++++ +.|+.+|.+.+..+.+.||+ ..+|++
T Consensus 33 ~~v~~l~~~~~~~~~~-~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 108 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA-GAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGV---RSVPTL 108 (140)
T ss_dssp -----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CccccCCHHHHHHHHH-cCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCC---CccCEE
Confidence 5567788877776211 223333333333334567888899999999997 99999999988888999999 578999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
+++.++. .+.+.+ ..+.+++.+|++.+++|+
T Consensus 109 ~~~~~G~~~~~~~G-------~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 109 VLFRRGAPVATWVG-------ASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp EEEETTEEEEEEES-------CCCHHHHHHHHHHHHTCC
T ss_pred EEEeCCcEEEEEeC-------CCCHHHHHHHHHHHHccC
Confidence 9887443 333433 468999999999999874
No 28
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.05 E-value=7.1e-05 Score=56.55 Aligned_cols=102 Identities=13% Similarity=0.197 Sum_probs=74.8
Q ss_pred eeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.++|.+++..... ..+.++++.|. ..-..-..+...+.++|+.+++ +.|+.+|.+..+.+.+.||+ ..+|+++
T Consensus 6 v~~l~~~~~~~~~~-~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 81 (111)
T 3gnj_A 6 LEKLDTNTFEQLIY-DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSL---KGVPQIL 81 (111)
T ss_dssp SEECCHHHHHHHHT-TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTC---CSSCEEE
T ss_pred ceecCHHHHHHHHH-hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCC---CcCCEEE
Confidence 66778888776321 23334444444 3334567888899999999998 99999999999889999999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++.+++ ...+.+ ..+.+++.+|++.++.
T Consensus 82 ~~~~g~~~~~~~g-------~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 82 YFKDGEYKGKMAG-------DVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEETTEEEEEEES-------SCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEEEec-------cCCHHHHHHHHHHHhc
Confidence 887443 233333 4689999999998764
No 29
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.04 E-value=0.00023 Score=62.41 Aligned_cols=171 Identities=11% Similarity=0.058 Sum_probs=101.8
Q ss_pred HhhcccchhHHhhhc----ceeeEeeec--cccHHHHhHcCCCCCCeEEEEccCCC----CcccccCCCCHHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMR----KFLTLLKML--DFSEDTMVLYDFDKVPALVALQPSYN----EHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~----k~~~v~~~~--~~seel~~~y~~~~~PsIvlfk~~de----e~~~f~g~f~~~~L~~FI~~ 90 (288)
+.+.|.+..+....+ ++..+.+-- +-..+++..|++.+.|++++|++... ....+.| .+.+.|.+||..
T Consensus 46 ~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~ 124 (244)
T 3q6o_A 46 IAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLID 124 (244)
T ss_dssp HHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHH
Confidence 456666666655554 344444433 55688999999999999999996321 1123445 588888888766
Q ss_pred c----C------CCCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC---cEEEEEeCcCchhH
Q 023016 91 N----F------LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADF 157 (288)
Q Consensus 91 n----s------lPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~~~~~~ 157 (288)
. . .|.+...+.++...+.......+++++|.+.+. ...++++..+.. +.+..++.. ....
T Consensus 125 ~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~------~~~~~~~~d~~~~~~i~v~~~~~~-~~~l 197 (244)
T 3q6o_A 125 ALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGS------YLAREVALDLSQHKGVAVRRVLNT-EANV 197 (244)
T ss_dssp HHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTC------CHHHHHHHHTTTCTTEEEEEEETT-CHHH
T ss_pred HHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCc------chHHHHHHHhccCCceEEEEEeCc-hHHH
Confidence 3 2 223344444555442222444567777765331 134445555543 777777754 3577
Q ss_pred HhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 158 ADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 158 le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++.||+ ..+|++++++.+.+..... ....+.+.+..|++.+.
T Consensus 198 ~~~f~v---~~~Pslvl~~~~g~~~~~~-----~~~~~r~~~~~~l~~~~ 239 (244)
T 3q6o_A 198 VRKFGV---TDFPSCYLLFRNGSVSRVP-----VLMESRSFYTAYLQRLS 239 (244)
T ss_dssp HHHHTC---CCSSEEEEEETTSCEEECC-----CSSSSHHHHHHHHHTC-
T ss_pred HHHcCC---CCCCeEEEEeCCCCeEeec-----cccccHHHHHHHHHhCC
Confidence 899999 4699999999433322212 12346666777766543
No 30
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.03 E-value=8.7e-05 Score=55.44 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=74.2
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
.+.+++.+++.... .+.++++.|.. .-..-..+...+.++++.+++ +.|+.+|.+......+.+|+ ..+|++
T Consensus 4 ~v~~l~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 77 (106)
T 3die_A 4 AIVKVTDADFDSKV---ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEV---MSIPTL 77 (106)
T ss_dssp CCEECCTTTHHHHS---CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSBSEE
T ss_pred ceEECCHHHHHHHh---cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCC---cccCEE
Confidence 36778888888732 33444444443 334567888999999999999 99999999999889999999 578999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
++++++. .+.+.+ ..+.+++.+|+++.
T Consensus 78 ~~~~~G~~~~~~~g-------~~~~~~l~~~l~~~ 105 (106)
T 3die_A 78 IVFKDGQPVDKVVG-------FQPKENLAEVLDKH 105 (106)
T ss_dssp EEEETTEEEEEEES-------CCCHHHHHHHHHTT
T ss_pred EEEeCCeEEEEEeC-------CCCHHHHHHHHHHh
Confidence 9888443 333333 46889999999864
No 31
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.02 E-value=0.00013 Score=55.24 Aligned_cols=104 Identities=12% Similarity=0.038 Sum_probs=75.3
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
-+.+++.+++.... ...+.++++.|.. .-..-..+...++++|+.+++ +.|+.+|.+....+.+.+|+ ..+|++
T Consensus 8 ~v~~l~~~~~~~~~-~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~ 83 (115)
T 1thx_A 8 GVITITDAEFESEV-LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKV---EGVPAL 83 (115)
T ss_dssp SEEECCGGGHHHHT-TTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTC---CSSSEE
T ss_pred ceEEeeccchhhHh-hcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCC---CceeEE
Confidence 47888888887521 2333444444443 233456788889999999998 99999999988888999999 478999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+++.++. .+.+.+ ..+.+++.+|++..+.+
T Consensus 84 ~~~~~G~~~~~~~g-------~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 84 RLVKGEQILDSTEG-------VISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEETTEEEEEEES-------CCCHHHHHHHHHHHHC-
T ss_pred EEEcCCEEEEEecC-------CCCHHHHHHHHHHHhcC
Confidence 9887443 333333 46899999999998764
No 32
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.00 E-value=0.00016 Score=54.39 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=74.3
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
.|.+++.+++... ....+.++++.|.. .-..-..+...++++|+.+++ +.|+.+|.+..+...+.+|+ ..+|++
T Consensus 3 ~v~~l~~~~f~~~-~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 78 (108)
T 2trx_A 3 KIIHLTDDSFDTD-VLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTL 78 (108)
T ss_dssp TEEECCTTTHHHH-TTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTC---CSSSEE
T ss_pred cceecchhhHHHH-HHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---cccCEE
Confidence 4677888887742 12334455555543 334456788889999999998 99999999988888999999 578999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+++.++. .+.+.+ ..+.+++.+|++..+
T Consensus 79 ~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFKNGEVAATKVG-------ALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEETTEEEEEEES-------CCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEec-------CCCHHHHHHHHHHhh
Confidence 9887443 333333 468999999999865
No 33
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.99 E-value=0.00013 Score=54.34 Aligned_cols=101 Identities=8% Similarity=0.102 Sum_probs=71.7
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
|..+|.+++..... ..+.++++.|.. .-..-..+...+.++|+++++ +.|+.+|.+....+.+.+|+ ..+|+++
T Consensus 2 v~~~~~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 77 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL-ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNI---RSIPTVL 77 (105)
T ss_dssp CEECCTTTHHHHTT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ceechhhhHHHHHh-cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCC---CcccEEE
Confidence 45677777766212 223344444443 334556788889999999998 99999999988888999999 5789998
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+..++. .+.+.+ ..+.+++.+|++.++
T Consensus 78 ~~~~g~~~~~~~G-------~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFKNGERKESIIG-------AVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEETTEEEEEEEE-------CCCHHHHHHHHHHHC
T ss_pred EEeCCeEEEEEec-------CCCHHHHHHHHHhhC
Confidence 887443 333333 468899999998763
No 34
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.99 E-value=0.00011 Score=54.37 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=73.8
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I 174 (288)
|.++|.+++.... ..+.++++.|.. .-..-......++++++.++++.|+.+|.+......+.+|+ ..+|++++
T Consensus 1 V~~l~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 75 (104)
T 2e0q_A 1 VIHLDSKNFDSFL--ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGV---MSLPTVIF 75 (104)
T ss_dssp CEECCTTTHHHHH--HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSCEEEE
T ss_pred CeecCHHHHHHHH--hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCc---cccCEEEE
Confidence 4577888877632 334444544543 33455678889999999998899999999988888999999 46899998
Q ss_pred EeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 175 WDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 175 ~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+.++. .+.+.+ ..+.+++.+|++..+.
T Consensus 76 ~~~g~~~~~~~g-------~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 FKDGEPVDEIIG-------AVPREEIEIRIKNLLG 103 (104)
T ss_dssp EETTEEEEEEES-------CCCHHHHHHHHHHHHT
T ss_pred EECCeEhhhccC-------CCCHHHHHHHHHHHhc
Confidence 87443 333333 4688999999998764
No 35
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.98 E-value=0.00012 Score=54.99 Aligned_cols=101 Identities=12% Similarity=0.157 Sum_probs=72.2
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
|.++|.+++..... ..+.++++.|.. .-..-......++++++.+++ +.|+.+|.+..+...+.+|+ ..+|+++
T Consensus 3 v~~l~~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVL-ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGI---RSIPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTC---CSSCEEE
T ss_pred cEeccHHHHHHHHh-cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCC---CcCCEEE
Confidence 55677777765211 223344444443 334456788889999999998 99999999988888999999 4789998
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++.++. .+.+.+ ..+.+++.++++.++
T Consensus 79 ~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIG-------AVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEES-------CCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeC-------CCCHHHHHHHHHHHh
Confidence 887443 343433 468899999999875
No 36
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.95 E-value=0.00015 Score=54.22 Aligned_cols=100 Identities=9% Similarity=0.061 Sum_probs=72.9
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++.+++... ....+.++++.|.. .-..-..+...+.++++.+++ +.|+.+|.+..+...+.+|+ ..+|+++
T Consensus 4 v~~l~~~~~~~~-~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 79 (107)
T 2i4a_A 4 TLAVSDSSFDQD-VLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQV---RSIPTLM 79 (107)
T ss_dssp EEECCTTTHHHH-TTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTC---CSSSEEE
T ss_pred eeecchhhhhHH-HHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCC---CccCEEE
Confidence 677888887752 12334455555543 334467788889999999987 99999999988888999999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
++.++. .+.+.+ ..+.+++.+|++..
T Consensus 80 ~~~~G~~~~~~~G-------~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVIDKKVG-------ALPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEEEEES-------CCCHHHHHHHHHHT
T ss_pred EEeCCEEEEEecC-------CCCHHHHHHHHHhc
Confidence 887443 333333 46899999999874
No 37
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.95 E-value=5.3e-05 Score=60.82 Aligned_cols=115 Identities=10% Similarity=0.036 Sum_probs=83.0
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCe
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 171 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPa 171 (288)
+.+.+++.+++... ....+.++++.|. ..-..-..+...+.++|+.+++ +.|+.+|.+....+.+.||+ ..+|+
T Consensus 6 ~~v~~l~~~~f~~~-~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 81 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQ-VEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGV---QGTPT 81 (140)
T ss_dssp TTEEEECHHHHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTC---CEESE
T ss_pred cceEEcchHhHHHH-HHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCC---CcCCE
Confidence 45788888888731 2222334444444 3334567888999999999999 99999999999888999999 57899
Q ss_pred EEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccccCC
Q 023016 172 MVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGP 219 (288)
Q Consensus 172 i~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP 219 (288)
++++.++. .+.+.+ ..+.++|.+|++.++...-+...++.|
T Consensus 82 ~~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l~~~~~~~~~~~~ 123 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVG-------QIYPSILKNAVRDMLQHGEECIRKSTP 123 (140)
T ss_dssp EEEEETTEEEEEEES-------SCCHHHHHHHHHHHHHHHHHHHHTSBC
T ss_pred EEEEeCCcEEEEEcC-------CCCHHHHHHHHHHHhcccccCcccccc
Confidence 99887443 233433 468999999999998765554445544
No 38
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.93 E-value=9e-05 Score=55.41 Aligned_cols=102 Identities=7% Similarity=0.076 Sum_probs=73.4
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.++|.+++..+ ...+.++++.|.. .-..-..+...++++++.+++ +.|+.+|.+....+.+.||+ ..+|+++
T Consensus 3 v~~l~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 77 (109)
T 2yzu_A 3 PIEVTDQNFDET--LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRV---MSIPTVI 77 (109)
T ss_dssp CEECCTTTHHHH--HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ceEccHhHHHHH--hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCC---CcCCEEE
Confidence 567788887762 2333444444543 334557788899999999998 99999999988888999999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
++.++. .+.+.+ ..+.+++.+|++..+..
T Consensus 78 ~~~~g~~~~~~~g-------~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 78 LFKDGQPVEVLVG-------AQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEETTEEEEEEES-------CCCHHHHHHHHHTTC--
T ss_pred EEeCCcEeeeEeC-------CCCHHHHHHHHHHHhhh
Confidence 887443 333333 46899999999876643
No 39
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.92 E-value=0.00024 Score=53.92 Aligned_cols=103 Identities=16% Similarity=0.145 Sum_probs=73.8
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
.|..++.+++... ..+.+.++++.|.. .-..-......+.++++.+++ +.|+.+|.+......+.+|+ ..+|++
T Consensus 6 ~v~~l~~~~~~~~-~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 81 (112)
T 1t00_A 6 TLKHVTDDSFEQD-VLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGV---MSIPTL 81 (112)
T ss_dssp CCEEECTTTHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred eEEecchhhHHHH-HhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCC---CcccEE
Confidence 3667888877541 12233344444443 334456778889999999988 99999999988888999999 578999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+++.++. .+.+.+ ..+.+++.+|++.+++
T Consensus 82 ~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIVG-------AKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEES-------CCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEeC-------CCCHHHHHHHHHHHhh
Confidence 8887443 343433 4678999999998765
No 40
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.90 E-value=0.00025 Score=57.08 Aligned_cols=103 Identities=10% Similarity=0.118 Sum_probs=77.3
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
-+..++.+++..+. ..+.++++.|+. .-..-..+...++++|+.+++ +.|+.+|.+.+..+.+.||+ ..+|++
T Consensus 39 ~v~~l~~~~~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~ 113 (148)
T 3p2a_A 39 EVINATAETLDKLL--QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRI---RSIPTI 113 (148)
T ss_dssp CCEECCTTTHHHHT--TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred CceecCHHHHHHHH--hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCC---CccCEE
Confidence 36777888877632 344444444443 334556788899999999988 99999999999999999999 578999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
++++++. .+.+.+ ..+.++|.+|+++.+..
T Consensus 114 ~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 MLYRNGKMIDMLNG-------AVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEETTEEEEEESS-------CCCHHHHHHHHHHHHHS
T ss_pred EEEECCeEEEEEeC-------CCCHHHHHHHHHHHhcc
Confidence 9888443 333433 57899999999998764
No 41
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=0.0001 Score=57.64 Aligned_cols=106 Identities=12% Similarity=0.012 Sum_probs=76.4
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcC----C-cEEEEEeCcCchhHHhhcCCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANR----E-LVFCYVGIKQFADFADTFEANKKSK 168 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~r----g-l~Fv~VD~~~~~~~le~fGL~k~~~ 168 (288)
.+.+++.+++... ....+.++++.|.. .-..-..+...+.++|+.++ + +.|+.+|.+.+..+.+.||+ ..
T Consensus 8 ~v~~l~~~~~~~~-~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~ 83 (133)
T 1x5d_A 8 DVIELTDDSFDKN-VLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI---RG 83 (133)
T ss_dssp SCEECCTTHHHHH-TTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC---CS
T ss_pred cCEEcCHhhHHHH-HhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC---Ce
Confidence 4778888887762 11233444444543 22345667778888888886 6 99999999988888899999 57
Q ss_pred CCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 169 LPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 169 lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
+|++++++++. .+.+.+ ..+.+++.+|+++.+....
T Consensus 84 ~Pt~~~~~~g~~~~~~~G-------~~~~~~l~~~l~~~~~~~~ 120 (133)
T 1x5d_A 84 FPTIKIFQKGESPVDYDG-------GRTRSDIVSRALDLFSDNA 120 (133)
T ss_dssp SSEEEEEETTEEEEEECS-------CCSHHHHHHHHHHHHHHHS
T ss_pred eCeEEEEeCCCceEEecC-------CCCHHHHHHHHHHHhhccC
Confidence 99999998543 333433 4789999999999887654
No 42
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.88 E-value=0.00048 Score=68.10 Aligned_cols=150 Identities=9% Similarity=0.055 Sum_probs=96.5
Q ss_pred HhhcccchhHHhhhcc----eeeEeeec--cccHHHHhHcCCCCCCeEEEEccCCC---CcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRK----FLTLLKML--DFSEDTMVLYDFDKVPALVALQPSYN---EHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k----~~~v~~~~--~~seel~~~y~~~~~PsIvlfk~~de---e~~~f~g~f~~~~L~~FI~~n 91 (288)
|.+.|.+..+....+. +..+.+-- +-..+++.+|++.+.|++++|++... ....+.|..+.+.|.+||...
T Consensus 46 k~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 46 IAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDA 125 (519)
T ss_dssp HHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHH
Confidence 4566666666555543 44444433 34689999999999999999996321 223456777888888888663
Q ss_pred ----C------CCCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC---cEEEEEeCcCchhHH
Q 023016 92 ----F------LPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE---LVFCYVGIKQFADFA 158 (288)
Q Consensus 92 ----s------lPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~~~~~~l 158 (288)
. .|.+..++.++...+.......+++++|.+.+. ...++++..+.. +.+..++.. ...++
T Consensus 126 l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s------~~~~~~~ldl~~~~~v~v~~v~~~-~~~l~ 198 (519)
T 3t58_A 126 LESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS------YLGREVTLDLSQYHAVAVRRVLNT-ESDLV 198 (519)
T ss_dssp HTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC------CHHHHHHHHTTTCTTEEEEEEETT-CHHHH
T ss_pred HhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch------HHHHHHHHHhhccCCeeEEEecCc-hHHHH
Confidence 2 233455565665553333445577777765431 134556666654 777777654 35678
Q ss_pred hhcCCCCCCCCCeEEEEeCCce
Q 023016 159 DTFEANKKSKLPKMVVWDGNEN 180 (288)
Q Consensus 159 e~fGL~k~~~lPai~I~d~~~K 180 (288)
+.||+ ..+|++++.+.+.+
T Consensus 199 ~kfgV---~~~Pslvl~~~nGk 217 (519)
T 3t58_A 199 NKFGV---TDFPSCYLLLRNGS 217 (519)
T ss_dssp HHHTC---CCSSEEEEEETTSC
T ss_pred HHcCC---CCCCeEEEEeCCCc
Confidence 99999 47899999994433
No 43
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.88 E-value=0.00012 Score=56.15 Aligned_cols=107 Identities=8% Similarity=0.057 Sum_probs=74.6
Q ss_pred CCCCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 92 FLPLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 92 slPLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
.-..+.+++.+++... ....+.++++.|.. .-..-..+...++++|+.+++ +.|+.+|.+....+.+.+|+ ..+
T Consensus 10 ~~~~v~~l~~~~~~~~-~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i---~~~ 85 (121)
T 2i1u_A 10 EKSATIKVTDASFATD-VLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQV---VSI 85 (121)
T ss_dssp --CCSEECCTTTHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSS
T ss_pred hcccceecCHHHHHHH-HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCC---CcC
Confidence 3445778888887641 11223344444443 334567788889999999988 99999999988888999999 578
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
|+++++.++. .+.+.+ ..+.+++.+|++..+.+
T Consensus 86 Pt~~~~~~g~~~~~~~G-------~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 86 PTLILFKDGQPVKRIVG-------AKGKAALLRELSDVVPN 119 (121)
T ss_dssp SEEEEEETTEEEEEEES-------CCCHHHHHHHTCSCCCC
T ss_pred CEEEEEECCEEEEEecC-------CCCHHHHHHHHHHHHhh
Confidence 9999887443 333333 46788999998876543
No 44
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.86 E-value=0.00021 Score=56.64 Aligned_cols=105 Identities=8% Similarity=0.058 Sum_probs=73.2
Q ss_pred CCeeecCccchhh-hcccc---------CCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhc
Q 023016 94 PLSVPINQDTLNL-LKDDK---------RKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTF 161 (288)
Q Consensus 94 PLV~e~n~et~~~-l~~~~---------~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~f 161 (288)
+.+.+++.+++.. +.... .+.++++.|+. .-..-..+...+.++++.+++ +.|+.+|.+....+.+.|
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 101 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDF 101 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHc
Confidence 3466666666544 21111 23344444443 223456788899999999998 999999999998999999
Q ss_pred CCCCCCCCCeEEEEe-CCceeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 162 EANKKSKLPKMVVWD-GNENYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 162 GL~k~~~lPai~I~d-~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
|+ ..+|++++++ ++....+.+ ..+.++|.+|++..++
T Consensus 102 ~v---~~~Pt~~~~~~~g~~~~~~G-------~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 102 GI---QSIPTIWFVPMKGEPQVNMG-------ALSKEQLKGYIDKVLL 139 (141)
T ss_dssp TC---CSSSEEEEECSSSCCEEEES-------CCCHHHHHHHHHHTTC
T ss_pred CC---CCcCEEEEEeCCCCEEEEeC-------CCCHHHHHHHHHHHHc
Confidence 99 5789999997 443223333 4789999999998765
No 45
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.85 E-value=0.00028 Score=54.76 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=73.8
Q ss_pred CCCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCC
Q 023016 93 LPLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 170 (288)
Q Consensus 93 lPLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lP 170 (288)
-+.+...+.+++... ..+.+.++++.|.. .-..-..+...+.++++++++ +.|+.+|.+....+.+.||+ ..+|
T Consensus 12 ~~~~~~~~~~~f~~~-v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 87 (119)
T 1w4v_A 12 STTFNIQDGPDFQDR-VVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEV---SAVP 87 (119)
T ss_dssp CSEEECCSHHHHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTC---CSSS
T ss_pred ceEEEecChhhHHHH-HHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC---Cccc
Confidence 355677777777652 11233344444443 334456788889999999988 99999999988888999999 5789
Q ss_pred eEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 171 KMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 171 ai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+++++.+++ .+.+.+ ..+.+++.+|++..+
T Consensus 88 t~~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVG-------IKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTEEEEEEES-------CCCHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcC-------CCCHHHHHHHHHHHh
Confidence 999887443 333333 468999999999875
No 46
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=0.00021 Score=55.75 Aligned_cols=107 Identities=10% Similarity=-0.002 Sum_probs=77.4
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCchhHHhhcCCCCCCCCCe
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLPK 171 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~~le~fGL~k~~~lPa 171 (288)
..+.++|.+++.. ..+.+ .++.+....-..-..+...+.++|+.+++ +.|+.+|.+++....+.+|+ ..+|+
T Consensus 7 ~~v~~l~~~~f~~--~~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt 80 (126)
T 1x5e_A 7 GNVRVITDENWRE--LLEGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFII---NALPT 80 (126)
T ss_dssp CSEEECCTTTHHH--HTSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CccEEecHHHHHH--HhCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCC---cccCE
Confidence 4577888888877 33333 33333333334556788889999999885 99999999988888999999 57999
Q ss_pred EEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 172 MVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 172 i~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
++++.++....+.+ ..+.+++.+|+++.+...++|
T Consensus 81 ~~~~~~G~~~~~~G-------~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 81 IYHCKDGEFRRYQG-------PRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp EEEEETTEEEECCS-------CCCHHHHHHHHHTCGGGGSCE
T ss_pred EEEEeCCeEEEeec-------CCCHHHHHHHHHHHhhccCCC
Confidence 99887544333333 578999999999887655544
No 47
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.85 E-value=0.0003 Score=55.09 Aligned_cols=102 Identities=10% Similarity=0.087 Sum_probs=73.2
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcC-----C-cEEEEEeCcCchhHHhhcCCCCC
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANR-----E-LVFCYVGIKQFADFADTFEANKK 166 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~r-----g-l~Fv~VD~~~~~~~le~fGL~k~ 166 (288)
+.|.+++.+++..+.. +.+.++++.|+. --..-..+...+.++|+.+. + +.|+.+|.+++..+.+.|++
T Consensus 15 ~~v~~l~~~~f~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v--- 90 (127)
T 3h79_A 15 SRVVELTDETFDSIVM-DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRV--- 90 (127)
T ss_dssp CCCEECCTTTHHHHHT-CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTC---
T ss_pred CceEECChhhHHHHHh-CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCC---
Confidence 4578889988887322 223444444543 23445678888999987653 4 99999999999899999999
Q ss_pred CCCCeEEEEeCCce---eeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 167 SKLPKMVVWDGNEN---YLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 167 ~~lPai~I~d~~~K---Y~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
..+|++++++++.+ +.+.+ ..+.++|.+|+++.
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~~G-------~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEYSG-------QRYLSLVDSFVFQN 126 (127)
T ss_dssp CSSSEEEEECSSCSSSCEECCS-------CCCHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCCCCceEecC-------CccHHHHHHHHHhc
Confidence 57999999983322 44443 57999999999863
No 48
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.85 E-value=0.00025 Score=60.89 Aligned_cols=117 Identities=15% Similarity=0.240 Sum_probs=84.6
Q ss_pred HHHHHHHcCCCCeeecCccchhhhccccCCcEEEEEEccCh--------hhHHHHHHHHHHHHHhcC-----C-cEEEEE
Q 023016 84 LEEFIKQNFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETE--------EKSQKLVTTLKAAASANR-----E-LVFCYV 149 (288)
Q Consensus 84 L~~FI~~nslPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~--------e~~e~~~~~l~~vAk~~r-----g-l~Fv~V 149 (288)
+++++....-.-+.++|.+++..+....++.++++.|.... ..=..+...|+++|+.+. + +.|+.|
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 34555555556789999999987322334556666665421 124688899999999987 7 999999
Q ss_pred eCcCchhHHhhcCCCCCCCCCeEEEEe-CC-ce-------------eeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 150 GIKQFADFADTFEANKKSKLPKMVVWD-GN-EN-------------YLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 150 D~~~~~~~le~fGL~k~~~lPai~I~d-~~-~K-------------Y~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
|.++++..++.||+ ..+|++++.. +. .. |.+.. ....+++++.+|+.+-..
T Consensus 88 D~d~~~~la~~~~I---~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~-----~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 88 DVNEVPQLVKDLKL---QNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVP-----ENAENTLQFGDFLAKILN 153 (178)
T ss_dssp ETTTCHHHHHHTTC---CSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCG-----GGTTCHHHHHHHHHHHHT
T ss_pred ECccCHHHHHHcCC---CCCCEEEEEcCCCCCCccccccccCCcceeeccc-----CCCcCHHHHHHHHHHhcC
Confidence 99999999999999 5799999888 22 12 33322 125789999999998655
No 49
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.84 E-value=0.00014 Score=54.37 Aligned_cols=100 Identities=8% Similarity=0.098 Sum_probs=71.6
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.++|.+++..+ ...+.++++.|.. .-..-......++++|+.+++ +.|+.+|.++.....+.+|+ ..+|+++
T Consensus 2 v~~l~~~~~~~~--~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQA--IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGI---MSIPTLI 76 (105)
T ss_dssp CEEECTTTHHHH--HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred ceeccHHhHHHH--HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCC---ccccEEE
Confidence 567788877762 2333344444443 334456788889999999998 99999999988888999999 4689999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++.++. .+.+.+ ..+.+++.+|++..+
T Consensus 77 ~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGRPVKQLIG-------YQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTEEEEEEES-------CCCHHHHHHHTTTTT
T ss_pred EEeCCeEEEEEec-------CCCHHHHHHHHHHHh
Confidence 887443 333333 467889999887654
No 50
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.83 E-value=0.00022 Score=56.55 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=73.8
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++.+++... ....+.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.++...+.+.+|+ ..+|+++
T Consensus 24 v~~l~~~~f~~~-~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTD-VLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGIPTLL 99 (128)
T ss_dssp SEEECTTTHHHH-TTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTC---CSSSEEE
T ss_pred cEecChhhHHHH-HHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CccCEEE
Confidence 677788887742 12334455555543 334456778889999999998 99999999988888889999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++.++. .+.+.+ ..+.++|.+|++..++
T Consensus 100 ~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 100 LFKNGEVAATKVG-------ALSKGQLKEFLDANLA 128 (128)
T ss_dssp EEETTEEEEEEES-------CCCHHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEcC-------CCCHHHHHHHHHHhhC
Confidence 886443 333433 4689999999998763
No 51
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.82 E-value=0.00039 Score=55.29 Aligned_cols=87 Identities=8% Similarity=0.062 Sum_probs=65.6
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEe-CCceeeccCCCCCC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD-GNENYLTVIGSESI 190 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d-~~~KY~~~~~~~~~ 190 (288)
.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.+....+.+.||+ ..+|++++++ ++....+.+
T Consensus 39 k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~~G~~~~~~G----- 110 (136)
T 2l5l_A 39 KPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGI---RSIPSILFIPMEGKPEMAQG----- 110 (136)
T ss_dssp SCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC---CSSCEEEEECSSSCCEEEES-----
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCC---CCCCEEEEECCCCcEEEEeC-----
Confidence 344444443 334456788889999999998 99999999988888999999 4799999996 443323333
Q ss_pred CCCCCHHHHHHHHHHHhcCc
Q 023016 191 DEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 191 ~~e~t~e~I~~Fl~~fl~Gk 210 (288)
..+.++|.+|++..+.+.
T Consensus 111 --~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 111 --AMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp --CCCHHHHHHHHHHHHTSC
T ss_pred --CCCHHHHHHHHHHHhhcc
Confidence 478999999999987654
No 52
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.81 E-value=0.00026 Score=58.23 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=74.7
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++.+++... ...+.++++.|+. .-..-..+...++++|+++++ +.|+.+|.++++.+.+.||+ ..+|+++
T Consensus 49 ~~~l~~~~f~~~--~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i---~~~Pt~~ 123 (155)
T 2ppt_A 49 VAGIDPAILARA--ERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRI---QGIPAFI 123 (155)
T ss_dssp EEECCHHHHHHH--TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTC---CSSSEEE
T ss_pred CccCCHHHHHHH--HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCC---CcCCEEE
Confidence 567777777662 2334444444543 234456788899999999998 99999999998888999999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
++.+++ .+.+.+ ..+.++|.+|++..+..+
T Consensus 124 ~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 124 LFHKGRELARAAG-------ARPASELVGFVRGKLGAR 154 (155)
T ss_dssp EEETTEEEEEEES-------CCCHHHHHHHHHHHHC--
T ss_pred EEeCCeEEEEecC-------CCCHHHHHHHHHHHhccC
Confidence 887443 333433 468999999999987653
No 53
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.81 E-value=0.00023 Score=55.55 Aligned_cols=103 Identities=11% Similarity=0.048 Sum_probs=72.5
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
.+.+++.+++..... ..+.++++.|.. .-..-..+...+.++|+++++ +.|+.+|.+.+..+.+.|++ ..+|++
T Consensus 18 ~v~~l~~~~f~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~ 93 (130)
T 2dml_A 18 DVIELTPSNFNREVI-QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGV---QGFPTI 93 (130)
T ss_dssp SSEECCTTTHHHHTT-TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTC---CSSSEE
T ss_pred CcEECCHHHHHHHHh-cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCC---CccCEE
Confidence 467788888776211 223334444432 222334667778999999999 99999999988888999999 579999
Q ss_pred EEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 173 VVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 173 ~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++++ ++. .+.+.+ ..+.+++.+|+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~G-------~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 94 KIFGANKNKPEDYQG-------GRTGEAIVDAALSALR 124 (130)
T ss_dssp EEESSCTTSCEECCS-------CCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeec-------CCCHHHHHHHHHHHHh
Confidence 9998 333 344433 4789999999988653
No 54
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.79 E-value=0.0002 Score=55.23 Aligned_cols=107 Identities=10% Similarity=0.036 Sum_probs=74.0
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++.+++... ....+.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.+.+....+.+|+ ..+|+++
T Consensus 5 v~~l~~~~f~~~-~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~ 80 (122)
T 3aps_A 5 SIDLTPQTFNEK-VLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGI---KAYPSVK 80 (122)
T ss_dssp SEECCHHHHHHH-TTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred hhcCCHHHHHHH-HhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCC---CccceEE
Confidence 667887777431 22233344444443 334566788899999999997 99999999998888999999 4799999
Q ss_pred EEe-CCceeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 174 VWD-GNENYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 174 I~d-~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+++ ++....+.+.. ....+.++|.+|++..++.
T Consensus 81 ~~~~~~~~~~~~g~~---~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 81 LYQYERAKKSIWEEQ---INSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEGGGTEEEEEE---ECCSCHHHHHHHHHHHHHC
T ss_pred EEeCCCccceeeccc---cCcCCHHHHHHHHHHHHHh
Confidence 997 33322222200 0126899999999998863
No 55
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.74 E-value=0.00059 Score=50.61 Aligned_cols=100 Identities=11% Similarity=0.129 Sum_probs=68.1
Q ss_pred eecCc-cchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEE
Q 023016 97 VPINQ-DTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 97 ~e~n~-et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I 174 (288)
.+++. +++........+.++++.|. ..-..-......+.++++.++++.|+.+|.+..+...+.+|+ ..+|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSV---TAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCC---ccccEEEE
Confidence 34544 45554212113334444444 333455678888999999998899999999988888999999 57899998
Q ss_pred EeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 175 WDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 175 ~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++++. .+...+ .+.+++.+|+++++
T Consensus 79 ~~~g~~~~~~~G--------~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVDRFSG--------ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEEEEES--------SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC--------CCHHHHHHHHHhhC
Confidence 88443 233322 57889999998763
No 56
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.73 E-value=0.00084 Score=50.89 Aligned_cols=103 Identities=10% Similarity=0.057 Sum_probs=71.7
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCc-CchhHHhhcCCCCCCCCCe
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKLPK 171 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~-~~~~~le~fGL~k~~~lPa 171 (288)
..+.+++.+++..+.....+.++++.|.. .-..-......+.++|+.++++.|+.+|.+ ....+.+.||+ ..+|+
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v---~~~Pt 81 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVVPT 81 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SBSSE
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCC---CeeeE
Confidence 45778888887762222123344444443 334456788889999999988999999998 67788899999 47899
Q ss_pred EEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 172 MVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 172 i~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+++..++. .+.+.+ .+.+++.+|++.++
T Consensus 82 ~~~~~~G~~~~~~~G--------~~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 82 FKILKENSVVGEVTG--------AKYDKLLEAIQAAR 110 (111)
T ss_dssp EEEESSSSEEEEEES--------SCHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcC--------CCHHHHHHHHHHhh
Confidence 87766443 333333 35889999999875
No 57
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.72 E-value=0.00044 Score=54.64 Aligned_cols=107 Identities=8% Similarity=0.038 Sum_probs=76.9
Q ss_pred CeeecCccchhhhccccCCcEEEEEEccC-hhhHHHHHHHHHHHHHhcCC----cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDET-EEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
.+.+++.+++..+ ...+.++++.|+.+ -..-..+...+.++|+.+++ +.|+.+|.+++..+.+.||+ ..+
T Consensus 18 ~v~~l~~~~~~~~--~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~ 92 (140)
T 2dj1_A 18 GVWVLNDGNFDNF--VADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDV---SGY 92 (140)
T ss_dssp TEEECCTTTHHHH--HTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTC---CSS
T ss_pred CCEEcChHhHHHH--HhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCC---Ccc
Confidence 4677888887762 23344555555542 23445667778888887764 99999999988888899999 478
Q ss_pred CeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 170 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 170 Pai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
|+++++.+++...+.+ ..+.++|.+|++..+.....+
T Consensus 93 Pt~~~~~~G~~~~~~g-------~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 93 PTIKILKKGQAVDYDG-------SRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp SEEEEEETTEEEECCS-------CCCHHHHHHHHHHHHSSSCCC
T ss_pred CeEEEEECCcEEEcCC-------CCCHHHHHHHHHHhcCCCCCC
Confidence 9999887544333433 578999999999998766544
No 58
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.72 E-value=0.00051 Score=59.55 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=81.8
Q ss_pred CCCCeeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 92 FLPLSVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 92 slPLV~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
..+.+..+|.+++..... +.+.++++.|+ ..-..-..+...+.++|+++++ +.|+.+|.+.+..+.+.||+ ..+
T Consensus 10 ~~~~~~~lt~~~f~~~v~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~ 85 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVL-KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI---RGI 85 (222)
T ss_dssp CSCCCEECCTTTHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTC---CSB
T ss_pred CCCCceeCCHHHHHHHHH-hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCC---CcC
Confidence 346678888888876212 23334444444 3334457888999999999999 99999999988888999999 579
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
|++++++++. ...+.+ ..+.+++.+|++..+++...+
T Consensus 86 Pt~~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l~~~~~~ 123 (222)
T 3dxb_A 86 PTLLLFKNGEVAATKVG-------ALSKGQLKEFLDANLAGSAME 123 (222)
T ss_dssp SEEEEEETTEEEEEEES-------CCCHHHHHHHHHHHSCCSCCB
T ss_pred CEEEEEECCeEEEEecc-------ccChHHHHHHHHhhccccccc
Confidence 9999988443 233333 478999999999999887543
No 59
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.70 E-value=0.00065 Score=52.32 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=73.8
Q ss_pred CCCCeeecCccchhh-hccc-cCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCC
Q 023016 92 FLPLSVPINQDTLNL-LKDD-KRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSK 168 (288)
Q Consensus 92 slPLV~e~n~et~~~-l~~~-~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~ 168 (288)
..|.+...+.+++.. +... ..+.++++.|.. .-..-..+...+++++++++++.|+.+|.++...+.+.+|+ ..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 87 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSV---EA 87 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CS
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCC---Cc
Confidence 346666677777665 2111 123344444443 33445677888999999998899999999988888999999 57
Q ss_pred CCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 169 LPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 169 lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+|+++++.++. .+.+.+ .. .+++.+|++..+.+
T Consensus 88 ~Pt~~~~~~G~~~~~~~G-------~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 88 MPTFLFMKEGDVKDRVVG-------AI-KEELTAKVGLHAAA 121 (122)
T ss_dssp SSEEEEEETTEEEEEEES-------SC-HHHHHHHHHHHHSC
T ss_pred ccEEEEEeCCEEEEEEeC-------cC-HHHHHHHHHHHhcc
Confidence 89998887443 333433 24 89999999998764
No 60
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.70 E-value=0.00044 Score=53.56 Aligned_cols=102 Identities=8% Similarity=0.072 Sum_probs=70.0
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
+.....|.+++..+.....+.++++.|. ..-..-..+...+.++|++++++.|+.+|.++...+.+.||+ ..+|++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~ 88 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEV---KSMPTF 88 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTC---CSSSEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---ccccEE
Confidence 3344445566655211112333344443 333445678889999999998899999999999899999999 579999
Q ss_pred EEEeCC-ceeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 173 VVWDGN-ENYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 173 ~I~d~~-~KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
+++.++ ....+.+ . +.++|.+|++++
T Consensus 89 ~~~~~G~~~~~~~G-------~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 89 QFFKKGQKVGEFSG-------A-NKEKLEATINEL 115 (116)
T ss_dssp EEESSSSEEEEEES-------C-CHHHHHHHHHHH
T ss_pred EEEeCCeEEEEEcC-------C-CHHHHHHHHHHh
Confidence 988744 3333333 3 899999999875
No 61
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.69 E-value=0.00054 Score=51.42 Aligned_cols=98 Identities=8% Similarity=0.082 Sum_probs=71.7
Q ss_pred CeeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcC---C-cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANR---E-LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~r---g-l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
.+.++|.+++... ...+ +.++.|. ..-..-..+...+.++|+.++ + +.|+.+|.+....+.+.||+ ..+
T Consensus 6 ~v~~l~~~~~~~~--~~~~-~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~ 79 (111)
T 3uvt_A 6 TVLALTENNFDDT--IAEG-ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV---RGY 79 (111)
T ss_dssp CSEECCTTTHHHH--HHSS-EEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC---CSS
T ss_pred cceEcChhhHHHH--hcCC-cEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC---Ccc
Confidence 4678888888773 2233 3444444 333456788889999999876 3 99999999988889999999 579
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
|+++++.++. .+.+.+ ..+.++|.+|+++
T Consensus 80 Pt~~~~~~g~~~~~~~g-------~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 80 PTLLLFRGGKKVSEHSG-------GRDLDSLHRFVLS 109 (111)
T ss_dssp SEEEEEETTEEEEEECS-------CCSHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEeccC-------CcCHHHHHHHHHh
Confidence 9999887443 333433 4789999999986
No 62
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.69 E-value=0.0003 Score=53.86 Aligned_cols=100 Identities=10% Similarity=0.055 Sum_probs=72.0
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.++|.+++.... .+.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.+......+.+|+ ..+|+++
T Consensus 3 v~~l~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET---SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGV---MSIPTLL 76 (112)
T ss_dssp CEECCTTTHHHHH---SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTC---CSBSEEE
T ss_pred eEEecHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCC---CcccEEE
Confidence 5678888887632 33444444443 223345677788999999987 99999999988888999999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++.+++ .+.+.+ ..+.+++.+|+++.+.
T Consensus 77 ~~~~G~~~~~~~G-------~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 77 VLKDGEVVETSVG-------FKPKEALQELVNKHLL 105 (112)
T ss_dssp EEETTEEEEEEES-------CCCHHHHHHHHHTTSC
T ss_pred EEeCCEEEEEEeC-------CCCHHHHHHHHHHHHH
Confidence 886443 333433 4689999999987554
No 63
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.69 E-value=0.00042 Score=53.61 Aligned_cols=71 Identities=11% Similarity=0.171 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHH
Q 023016 125 EKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFL 203 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl 203 (288)
..-..+...+.++|+.+.++.|+.+|.++++..++.||+ ..+|+++++.+++ ...+.+ .+.++|.+|+
T Consensus 33 ~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V---~~~PT~~~~~~G~~v~~~~G--------~~~~~l~~~i 101 (105)
T 3zzx_A 33 GPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQI---ACMPTFLFMKNGQKLDSLSG--------ANYDKLLELV 101 (105)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTC---CBSSEEEEEETTEEEEEEES--------CCHHHHHHHH
T ss_pred CCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCC---CeecEEEEEECCEEEEEEeC--------cCHHHHHHHH
Confidence 345678889999999998899999999999999999999 5799999988553 333333 4789999999
Q ss_pred HHH
Q 023016 204 EGY 206 (288)
Q Consensus 204 ~~f 206 (288)
+.+
T Consensus 102 ~k~ 104 (105)
T 3zzx_A 102 EKN 104 (105)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
No 64
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.66 E-value=0.00065 Score=50.53 Aligned_cols=100 Identities=9% Similarity=0.068 Sum_probs=68.7
Q ss_pred eeecCc-cchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 96 SVPINQ-DTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 96 V~e~n~-et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
+.+++. +++........+.+.++.|.. .-..-..+...++++|+.+++ +.|+.+|.+......+.+|+ ..+|++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNI---SSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCC---CcccEE
Confidence 455665 555542111133444444443 334567788889999999976 99999999988888999999 578999
Q ss_pred EEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 173 VVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 173 ~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
+++.++. .+.+.+ .+.+++.+|++.+
T Consensus 79 ~~~~~G~~~~~~~g--------~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG--------ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEETTEEEEEEES--------CCHHHHHHHHHHT
T ss_pred EEEcCCcEEEEEcC--------CCHHHHHHHHHHh
Confidence 8887443 222322 5788999999875
No 65
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.62 E-value=0.00072 Score=53.45 Aligned_cols=100 Identities=8% Similarity=0.065 Sum_probs=72.2
Q ss_pred eeecCc-cchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQ-DTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~-et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++. +++..+. ..+.++++.|.. .-..-..+...+.++|++++++.|+.+|.++...+.+.||+ ..+|+++
T Consensus 21 v~~l~~~~~f~~~~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~Pt~~ 95 (125)
T 1r26_A 21 VVDVYSVEQFRNIM--SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRV---LQLPTFI 95 (125)
T ss_dssp CEEECCHHHHHHHH--HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEE
T ss_pred eEECCCHHHHHHHH--ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CcccEEE
Confidence 677887 7776632 333344444443 33445677888999999997799999999988888999999 5799998
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++.++. ...+.+ .+.++|.+|++.++.
T Consensus 96 i~~~G~~~~~~~G--------~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 96 IARSGKMLGHVIG--------ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEETTEEEEEEES--------SCHHHHHHHHHHHHH
T ss_pred EEeCCeEEEEEeC--------CCHHHHHHHHHHHhc
Confidence 887443 222322 578999999998864
No 66
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.59 E-value=0.00081 Score=50.01 Aligned_cols=83 Identities=7% Similarity=0.070 Sum_probs=62.6
Q ss_pred cEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCC
Q 023016 114 IVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESID 191 (288)
Q Consensus 114 ~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~ 191 (288)
.++++.|. ..-..-......+.++|++++++.|+.+|.+......+.+|+ ..+|+++++.++. ...+.+
T Consensus 21 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~g------ 91 (105)
T 3m9j_A 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEV---KSMPTFQFFKKGQKVGEFSG------ 91 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTC---CBSSEEEEEETTEEEEEEES------
T ss_pred CeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCC---CcCcEEEEEECCeEEEEEeC------
Confidence 33344443 333456788889999999998899999999998888999999 5789999988443 233333
Q ss_pred CCCCHHHHHHHHHHHh
Q 023016 192 EEDQGSQISRFLEGYR 207 (288)
Q Consensus 192 ~e~t~e~I~~Fl~~fl 207 (288)
.+.+++.+|+++.+
T Consensus 92 --~~~~~l~~~l~~~l 105 (105)
T 3m9j_A 92 --ANKEKLEATINELV 105 (105)
T ss_dssp --SCHHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHhC
Confidence 38999999998753
No 67
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.58 E-value=0.00085 Score=50.61 Aligned_cols=83 Identities=8% Similarity=0.097 Sum_probs=62.5
Q ss_pred EEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCC
Q 023016 115 VLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESID 191 (288)
Q Consensus 115 ~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~ 191 (288)
++++.|.. .-..-..+...++++++.+++ +.|+.+|.+....+.+.+|+ ..+|+++++.++. .+.+.+
T Consensus 26 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~~~~G~~~~~~~G------ 96 (112)
T 1ep7_A 26 PIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGI---TAMPTFHVYKDGVKADDLVG------ 96 (112)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTC---CBSSEEEEEETTEEEEEEES------
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCC---CcccEEEEEECCeEEEEEcC------
Confidence 33444443 334456788889999999996 99999999988888999999 4789998887443 333433
Q ss_pred CCCCHHHHHHHHHHHhc
Q 023016 192 EEDQGSQISRFLEGYRE 208 (288)
Q Consensus 192 ~e~t~e~I~~Fl~~fl~ 208 (288)
.+.+++.+|++.+++
T Consensus 97 --~~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 97 --ASQDKLKALVAKHAA 111 (112)
T ss_dssp --CCHHHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHHhc
Confidence 388999999998875
No 68
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.58 E-value=0.00042 Score=52.27 Aligned_cols=94 Identities=5% Similarity=0.038 Sum_probs=58.8
Q ss_pred cchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-
Q 023016 102 DTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE- 179 (288)
Q Consensus 102 et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~- 179 (288)
+++.. ....+.++++.|. +.-..-..+...+.++|++++++.|+.+|.++.+...+.||+ ..+|+++++.+++
T Consensus 9 ~~~~~--~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~~ 83 (105)
T 4euy_A 9 EELAT--YIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAV---FTGPTVLLFYNGKE 83 (105)
T ss_dssp -CCSS--STTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC------------CCCCEEEEEETTEE
T ss_pred HHHHH--HHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCC---CCCCEEEEEeCCeE
Confidence 44544 2233444444444 333455678889999999996699999999988888999999 5789999988443
Q ss_pred eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 180 NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 180 KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
...+.+ ..+.+++.+|++.++
T Consensus 84 ~~~~~g-------~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 84 ILRESR-------FISLENLERTIQLFE 104 (105)
T ss_dssp EEEEES-------SCCHHHHHHHHHTTC
T ss_pred EEEEeC-------CcCHHHHHHHHHHhh
Confidence 233333 468999999998764
No 69
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.56 E-value=0.00059 Score=52.08 Aligned_cols=99 Identities=9% Similarity=0.185 Sum_probs=69.8
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I 174 (288)
....+.+++..+ .+.+.++++.|.. .-..-..+...+++++++++++.|+.+|.+....+.+.+|+ ..+|++++
T Consensus 11 ~~~~~~~~f~~~--~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~Pt~~~ 85 (112)
T 1syr_A 11 KIVTSQAEFDSI--ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENI---TSMPTFKV 85 (112)
T ss_dssp EEECSHHHHHHH--HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTC---CSSSEEEE
T ss_pred EEECCHHHHHHH--HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCC---CcccEEEE
Confidence 344555666652 2233444444443 33456788889999999998899999999988888899999 57899988
Q ss_pred EeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 175 WDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 175 ~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+.++. .+.+.+ . +.++|.+|++..+
T Consensus 86 ~~~G~~~~~~~G-------~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 86 YKNGSSVDTLLG-------A-NDSALKQLIEKYA 111 (112)
T ss_dssp EETTEEEEEEES-------C-CHHHHHHHHHTTC
T ss_pred EECCcEEEEEeC-------C-CHHHHHHHHHHhh
Confidence 87443 333333 3 8899999998754
No 70
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.54 E-value=0.0011 Score=52.67 Aligned_cols=106 Identities=9% Similarity=0.005 Sum_probs=71.6
Q ss_pred CCCeeecCccchhh-hccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCC
Q 023016 93 LPLSVPINQDTLNL-LKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLP 170 (288)
Q Consensus 93 lPLV~e~n~et~~~-l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lP 170 (288)
+.-+.++|.+++.. +...+...++++.|+ ..-..-..+...|.++|++|+++.|+-+|.++. .+.|++ ..+|
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v---~~~P 75 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHD---NCLP 75 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCG---GGCS
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCC---CCCC
Confidence 45677888888765 222222224444444 344456788899999999998899999999864 577888 5789
Q ss_pred eEEEEeCCce-eeccCCCCCC-CCCCCHHHHHHHHHH
Q 023016 171 KMVVWDGNEN-YLTVIGSESI-DEEDQGSQISRFLEG 205 (288)
Q Consensus 171 ai~I~d~~~K-Y~~~~~~~~~-~~e~t~e~I~~Fl~~ 205 (288)
+++++.+++. ..+.+ ...+ ...++.++|+.|+..
T Consensus 76 T~~~fk~G~~v~~~~G-~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 76 TIFVYKNGQIEAKFIG-IIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEEEEETTEEEEEEES-TTTTTCSSCCHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEeC-hhhhCCCCCCHHHHHHHHHH
Confidence 9999985532 22222 2111 246899999999975
No 71
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.53 E-value=0.00097 Score=50.87 Aligned_cols=83 Identities=10% Similarity=0.134 Sum_probs=62.3
Q ss_pred CcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCC
Q 023016 113 KIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESI 190 (288)
Q Consensus 113 ~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~ 190 (288)
+.++++.|. ..-..-..+...+.+++++++++.|+.+|.+....+.+.+|+ ..+|+++++++++ ...+.+
T Consensus 24 ~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~~~~~~~G----- 95 (109)
T 3f3q_A 24 DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEV---SAMPTLLLFKNGKEVAKVVG----- 95 (109)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEEEETTEEEEEEES-----
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCC---CccCEEEEEECCEEEEEEeC-----
Confidence 334444444 333455678889999999998899999999999889999999 5789999988443 233333
Q ss_pred CCCCCHHHHHHHHHHH
Q 023016 191 DEEDQGSQISRFLEGY 206 (288)
Q Consensus 191 ~~e~t~e~I~~Fl~~f 206 (288)
.+.++|.+|++.+
T Consensus 96 ---~~~~~l~~~i~~~ 108 (109)
T 3f3q_A 96 ---ANPAAIKQAIAAN 108 (109)
T ss_dssp ---SCHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHhh
Confidence 4789999999875
No 72
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.52 E-value=0.0017 Score=50.11 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=72.0
Q ss_pred CCCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCc-CchhHHhhcCCCCCCCCC
Q 023016 93 LPLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIK-QFADFADTFEANKKSKLP 170 (288)
Q Consensus 93 lPLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~-~~~~~le~fGL~k~~~lP 170 (288)
..-+.+++.+++........+.++++.|.. .-..-......+++++++++++.|+.+|.+ ......+.+|+ ..+|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v---~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGI---RVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCC---SSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCC---Ceee
Confidence 455778888887652121123344444443 334456788889999999989999999997 57778889999 4789
Q ss_pred eEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 171 KMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 171 ai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++++..+++ .+.+.+ ...+++.+|++.++
T Consensus 94 t~~~~~~G~~~~~~~G--------~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVGEVTG--------AKYDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEEEEES--------SCHHHHHHHHHHHT
T ss_pred EEEEEeCCcEEEEEcC--------CCHHHHHHHHHHhh
Confidence 988877443 333333 35889999998865
No 73
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.52 E-value=0.0019 Score=50.18 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=64.7
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEe--CcCchhHHhhcCCCCCCCCCeEEEEe-CCc-eeeccCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVG--IKQFADFADTFEANKKSKLPKMVVWD-GNE-NYLTVIG 186 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD--~~~~~~~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~ 186 (288)
+.++++.|.. .-..-......+.++++++++ +.|+.+| .+....+.+.||+ ..+|++++++ ++. .+.+.+
T Consensus 26 ~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v---~~~Pt~~~~~~~G~~~~~~~G- 101 (126)
T 2l57_A 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDA---NIVPTTVFLDKEGNKFYVHQG- 101 (126)
T ss_dssp SSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTC---CSSSEEEEECTTCCEEEEEES-
T ss_pred CCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCC---cceeEEEEECCCCCEEEEecC-
Confidence 3344444443 234456778889999999976 9999999 8877888899999 5789999998 543 333433
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 187 SESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 187 ~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
..+.+++.+|++..+...
T Consensus 102 ------~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 102 ------LMRKNNIETILNSLGVKE 119 (126)
T ss_dssp ------CCCHHHHHHHHHHHCCCC
T ss_pred ------CCCHHHHHHHHHHHhccc
Confidence 478999999999876543
No 74
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.47 E-value=0.00087 Score=52.55 Aligned_cols=101 Identities=9% Similarity=0.078 Sum_probs=68.8
Q ss_pred CCCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCC
Q 023016 93 LPLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLP 170 (288)
Q Consensus 93 lPLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lP 170 (288)
+|.+...+.+.... ....+.++++.|.. .-..-......+.++++++++ +.|+.+|.+......+.||+ ..+|
T Consensus 24 ~~~~~~~~~~~~~~--~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~P 98 (128)
T 3ul3_B 24 VPRLQQNGSNIING--VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSV---KSLP 98 (128)
T ss_dssp --CCCCCCCSSSSB--TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTC---CSSS
T ss_pred CCccccCCccHHHH--HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC---CCcC
Confidence 44444444444443 22334455554543 334456788889999999988 99999999998888999999 5799
Q ss_pred eEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 171 KMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 171 ai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
+++++.+++ ...+.+ ..+.++|.+|++.
T Consensus 99 t~~~~~~G~~~~~~~G-------~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 99 TIILLKNKTMLARKDH-------FVSSNDLIALIKK 127 (128)
T ss_dssp EEEEEETTEEEEEESS-------CCCHHHHHHHHTT
T ss_pred EEEEEECCEEEEEecC-------CCCHHHHHHHHHh
Confidence 999887443 233333 4789999999864
No 75
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.44 E-value=0.0018 Score=55.38 Aligned_cols=107 Identities=7% Similarity=0.012 Sum_probs=77.6
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCe
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPK 171 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPa 171 (288)
+-+..++.+++.... ..+.++++.|.. .-..-..+...+.++|+.+++ +.|+.+|.+....+.+.+|+ ..+|+
T Consensus 97 ~~v~~l~~~~f~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 171 (210)
T 3apq_A 97 PEIITLERREFDAAV--NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGV---NSYPS 171 (210)
T ss_dssp TTSEECCHHHHHHHH--HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTC---CSSSE
T ss_pred CceEEecHHHHHHHH--ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCC---CcCCe
Confidence 346677777776622 333344444443 334567788899999999998 99999999988888999999 57999
Q ss_pred EEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCccc
Q 023016 172 MVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 172 i~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklk 212 (288)
++++.++. ...+.+ ..+.++|.+|++..+...+.
T Consensus 172 ~~~~~~G~~~~~~~G-------~~~~~~l~~~i~~~l~~~~~ 206 (210)
T 3apq_A 172 LFIFRSGMAAVKYNG-------DRSKESLVAFAMQHVRSTVT 206 (210)
T ss_dssp EEEECTTSCCEECCS-------CCCHHHHHHHHHHHHHCCSS
T ss_pred EEEEECCCceeEecC-------CCCHHHHHHHHHHhCcccce
Confidence 99887433 333333 57899999999998876543
No 76
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.43 E-value=0.0012 Score=54.42 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=73.5
Q ss_pred ecCccchhhhccccCCcEEEEEEcc-Ch--hhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 98 PINQDTLNLLKDDKRKIVLAIVEDE-TE--EKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 98 e~n~et~~~l~~~~~~~~l~~lf~~-~~--e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
++|.+++.... .+.+.++++.|.. .- ..-..+...+.++|++|.+ +.|+-||.++++..+..||+ ..+|+++
T Consensus 19 ~vt~~~F~~~v-~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV---~siPTli 94 (137)
T 2qsi_A 19 LVDEATVDDFI-AHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGV---AVCPSLA 94 (137)
T ss_dssp EECTTTHHHHH-HTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTC---CSSSEEE
T ss_pred ccCHhHHHHHH-hcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC---ccCCEEE
Confidence 66777777521 2233344444543 22 3456788999999999998 99999999999999999999 5799999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++.+++ .-...+ -.+.++|.++++.+++
T Consensus 95 lFkdG~~v~~~vG-------~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 95 VVQPERTLGVIAK-------IQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEECCEEEEEEES-------CCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeC-------CCCHHHHHHHHHHHhc
Confidence 998654 223333 4678899999999884
No 77
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.40 E-value=0.002 Score=55.23 Aligned_cols=105 Identities=8% Similarity=0.008 Sum_probs=78.4
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC----cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE----LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
-+.++|.+++.. ....+.++++.|+. .-..-..+...+.++|+.+++ +.|+.+|.+....+.+.||+ ..+
T Consensus 16 ~v~~l~~~~~~~--~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v---~~~ 90 (241)
T 3idv_A 16 GVLVLNDANFDN--FVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDV---SGY 90 (241)
T ss_dssp TEEEECTTTHHH--HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTC---CSS
T ss_pred CcEEecccCHHH--HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCC---CcC
Confidence 477888888887 33344455555543 224456788889999988765 99999999988889999999 579
Q ss_pred CeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 170 PKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 170 Pai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
|++++++++....+.+ ..+.++|.+|++.......
T Consensus 91 Pt~~~~~~g~~~~~~g-------~~~~~~l~~~i~~~~~~~~ 125 (241)
T 3idv_A 91 PTIKILKKGQAVDYEG-------SRTQEEIVAKVREVSQPDW 125 (241)
T ss_dssp SEEEEEETTEEEECCS-------CSCHHHHHHHHHHHHSTTC
T ss_pred CEEEEEcCCCcccccC-------cccHHHHHHHHhhccCccc
Confidence 9999998554444433 5799999999999887653
No 78
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.39 E-value=0.0041 Score=46.67 Aligned_cols=101 Identities=9% Similarity=0.035 Sum_probs=67.7
Q ss_pred eeec-CccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPI-NQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~-n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.++ +.+++........+.++++.|. ..-..-..+...+.++|++++++.|+.+|.++.....+.||+ ..+|+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNI---SATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCC---CcccEEE
Confidence 3444 3456655211122333444444 333456778889999999996699999999988888899999 5789999
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++.++. ...+.+ .+.++|.+|++.++
T Consensus 80 ~~~~G~~~~~~~G--------~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 80 FFRNKVRIDQYQG--------ADAVGLEEKIKQHL 106 (107)
T ss_dssp EEETTEEEEEEES--------SCHHHHHHHHHHHH
T ss_pred EEECCeEEEEEeC--------CCHHHHHHHHHHhc
Confidence 887443 222332 45667999998865
No 79
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.39 E-value=0.0009 Score=52.31 Aligned_cols=109 Identities=10% Similarity=0.050 Sum_probs=76.6
Q ss_pred CCCeeecCccchhhhccccCCcEEEEEEccC-hhhHHHHHHHHHHHHHhcC--C-cEEEEEeCcCchhHHhhcCCCCCCC
Q 023016 93 LPLSVPINQDTLNLLKDDKRKIVLAIVEDET-EEKSQKLVTTLKAAASANR--E-LVFCYVGIKQFADFADTFEANKKSK 168 (288)
Q Consensus 93 lPLV~e~n~et~~~l~~~~~~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~r--g-l~Fv~VD~~~~~~~le~fGL~k~~~ 168 (288)
-+.|.+++.+++.... ...+.++++.|..+ -..-..+...+.++|+.++ + +.|+.+|.+.+....+.|++ ..
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIV-MDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKV---EG 81 (133)
T ss_dssp SCSSEECCTTTCCCCC-TCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCC---SS
T ss_pred CCceEEEcCCCHHHHh-ccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCC---Cc
Confidence 4568888888887621 12344555555542 2345677888999999997 4 99999999887777778888 57
Q ss_pred CCeEEEEeCC-c--eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 169 LPKMVVWDGN-E--NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 169 lPai~I~d~~-~--KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
+|++++++.+ . ...+.+ ...+.++|.+|++..+....
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g------g~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEG------GNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp SSEEEEECTTCTTSCEECCS------SCCSTTHHHHHHHHHSSSCS
T ss_pred CCEEEEEeCCCcccceEecC------CCcCHHHHHHHHHHhccccc
Confidence 9999999833 2 122332 24688999999999887653
No 80
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.39 E-value=0.003 Score=48.30 Aligned_cols=100 Identities=11% Similarity=0.191 Sum_probs=68.8
Q ss_pred eeecCc-cchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQ-DTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~-et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++. +++........+.++++.|. ..-..-..+...++++|+++ ++.|+.+|.+.+....+.+|+ ..+|+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~ 90 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNI---SAMPTFI 90 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTC---CSSSEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCC---CccceEE
Confidence 667776 66655211113333444444 33345567888899999998 899999999988888999999 5789998
Q ss_pred EEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 174 VWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 174 I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++.++. ...+.+ .+.+++.+|++.++
T Consensus 91 ~~~~G~~~~~~~G--------~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 91 AIKNGEKVGDVVG--------ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEETTEEEEEEES--------SCHHHHHHHHHHHC
T ss_pred EEeCCcEEEEEeC--------CCHHHHHHHHHHhC
Confidence 887443 233322 57889999998753
No 81
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.002 Score=48.75 Aligned_cols=102 Identities=13% Similarity=0.210 Sum_probs=67.7
Q ss_pred eeecCc-cchhhhccc-cCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhc--CCcEEEEEeCcCchhHHhhcCCCCCCCCC
Q 023016 96 SVPINQ-DTLNLLKDD-KRKIVLAIVEDE-TEEKSQKLVTTLKAAASAN--RELVFCYVGIKQFADFADTFEANKKSKLP 170 (288)
Q Consensus 96 V~e~n~-et~~~l~~~-~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~--rgl~Fv~VD~~~~~~~le~fGL~k~~~lP 170 (288)
|.+++. +++..+... ..+.++++.|.. .-..-..+...+.++++++ +++.|+.+|.+......+.+|+ ..+|
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~P 78 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI---SAVP 78 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTC---CSSS
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCC---Cccc
Confidence 456665 666552111 223344444443 2234567788899999994 4499999999988888999999 5789
Q ss_pred eEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 171 KMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 171 ai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+++++.++. ...+.+ ...+++.+|++.++.
T Consensus 79 t~~~~~~G~~~~~~~G--------~~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 79 YFIIIHKGTILKELSG--------ADPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEEETTEEEEEECS--------CCHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecC--------CCHHHHHHHHHHHHh
Confidence 999887443 333333 356679999998764
No 82
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.36 E-value=0.0018 Score=50.28 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=71.7
Q ss_pred CCCeeecCc-cchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCchhHHhhcCCCCCCC
Q 023016 93 LPLSVPINQ-DTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSK 168 (288)
Q Consensus 93 lPLV~e~n~-et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~~le~fGL~k~~~ 168 (288)
.+.+.+++. +++..+. ..+.++++.|.. .-..-..+...+.++++.+++ +.|+.+|.+....+.+.+|+ ..
T Consensus 14 ~~~~~~i~~~~~f~~~l--~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v---~~ 88 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVT--GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGI---RA 88 (121)
T ss_dssp CCCEEECCSHHHHHHHH--SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTC---CS
T ss_pred CcceEEcCCHHHHHHHH--cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCC---Cc
Confidence 345666655 5666532 333344444433 223456778889999999987 99999999988888999999 57
Q ss_pred CCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 169 LPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 169 lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+|+++++.++. .+.+.+ .+.++|.+|++.++
T Consensus 89 ~Pt~~~~~~G~~~~~~~G--------~~~~~l~~~l~~~l 120 (121)
T 2j23_A 89 MPTFVFFKNGQKIDTVVG--------ADPSKLQAAITQHS 120 (121)
T ss_dssp SSEEEEEETTEEEEEEES--------SCHHHHHHHHHHHT
T ss_pred ccEEEEEECCeEEeeEcC--------CCHHHHHHHHHHhh
Confidence 99999887443 333433 38899999999875
No 83
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.35 E-value=0.0027 Score=49.75 Aligned_cols=103 Identities=10% Similarity=0.092 Sum_probs=69.6
Q ss_pred CCeeec-Cccchhh-hccc-cCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 94 PLSVPI-NQDTLNL-LKDD-KRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 94 PLV~e~-n~et~~~-l~~~-~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
..|.++ |.+++.. +... ..+.++++.|.. .-..-..+...+++++++++++.|+.+|.++...+.+.||+ ..+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v---~~~ 92 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAI---QAM 92 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTC---CSS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCC---Ccc
Confidence 335555 3455544 2111 123344444443 23445677888999999998899999999988888999999 578
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
|+++++.++. .+.+.+ .+.+++.++++.++
T Consensus 93 Pt~~~~~~G~~~~~~~G--------~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG--------AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEES--------CCHHHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeC--------CCHHHHHHHHHHhc
Confidence 9998887443 333332 57899999998875
No 84
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.35 E-value=0.00047 Score=52.28 Aligned_cols=102 Identities=10% Similarity=0.093 Sum_probs=70.3
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcC---C-cEEEEEeCcCchhHHhhcCCCCCCCCC
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANR---E-LVFCYVGIKQFADFADTFEANKKSKLP 170 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~r---g-l~Fv~VD~~~~~~~le~fGL~k~~~lP 170 (288)
+.++|.+++..+ ...+.++++.|.. .-..-..+...+.++++.++ . +.|+.+|.+++..+.+.+|+ ..+|
T Consensus 9 v~~l~~~~~~~~--~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v---~~~P 83 (120)
T 1mek_A 9 VLVLRKSNFAEA--LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV---RGYP 83 (120)
T ss_dssp EEECCTTTHHHH--HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTC---CSSS
T ss_pred cEEechhhHHHH--HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCC---Cccc
Confidence 677888887763 2233444444443 22233456677888898886 3 99999999988888889999 4789
Q ss_pred eEEEEeCCce---eeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 171 KMVVWDGNEN---YLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 171 ai~I~d~~~K---Y~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+++++.++.. +.+.+ ..+.+++.+|+++.+..
T Consensus 84 t~~~~~~g~~~~~~~~~g-------~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 84 TIKFFRNGDTASPKEYTA-------GREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEEESSCSSSCEECCC-------CSSHHHHHHHHHTTSCC
T ss_pred EEEEEeCCCcCCcccccC-------ccCHHHHHHHHHhccCC
Confidence 9998874432 33333 47899999999876543
No 85
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.31 E-value=0.0037 Score=47.33 Aligned_cols=84 Identities=12% Similarity=0.137 Sum_probs=62.8
Q ss_pred EEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCCC
Q 023016 115 VLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDE 192 (288)
Q Consensus 115 ~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~~ 192 (288)
++++.|. ..-..-..+...++++++.++++.|+.+|.+....+.+.||+ ..+|+++++.++. .+.+.+
T Consensus 30 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~g------- 99 (118)
T 2vm1_A 30 LVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNV---EAMPTFLFIKDGEKVDSVVG------- 99 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSBSEEEEEETTEEEEEEES-------
T ss_pred EEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCC---CcCcEEEEEeCCeEEEEecC-------
Confidence 3344444 333455678889999999998899999999988888999999 5789999887443 233322
Q ss_pred CCCHHHHHHHHHHHhcC
Q 023016 193 EDQGSQISRFLEGYREG 209 (288)
Q Consensus 193 e~t~e~I~~Fl~~fl~G 209 (288)
.+.+++.++++.+++.
T Consensus 100 -~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 100 -GRKDDIHTKIVALMGS 115 (118)
T ss_dssp -CCHHHHHHHHHHHHC-
T ss_pred -CCHHHHHHHHHHHhcc
Confidence 5789999999998764
No 86
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.30 E-value=0.0069 Score=48.21 Aligned_cols=120 Identities=9% Similarity=0.033 Sum_probs=76.8
Q ss_pred CCCCeeecCccchhh-hccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 92 FLPLSVPINQDTLNL-LKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 92 slPLV~e~n~et~~~-l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
....+.+++.+++.. +...+.+.++++.|+. .-..-..+...+.++|++|+++.|+.+|.+... +.|++ ..+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~---~~~~i---~~~ 81 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI---EHYHD---NCL 81 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC---SSCCS---SCC
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc---ccCCC---CCC
Confidence 345577777777665 2222233455555543 334457788899999999988999999998653 67888 579
Q ss_pred CeEEEEeCCc-eeeccCCCCCC-CCCCCHHHHHHHHHHHhcCccccccccCCC
Q 023016 170 PKMVVWDGNE-NYLTVIGSESI-DEEDQGSQISRFLEGYREGRTEQKKVAGPS 220 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~-~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP~ 220 (288)
|+++++++++ ...+.+ ...+ ...++.++|++|++.+ |-+.+...+.|+
T Consensus 82 Pt~~~~~~G~~v~~~~G-~~~~~~~~~~~~~l~~~l~~~--~~i~~~~~~~~~ 131 (135)
T 2dbc_A 82 PTIFVYKNGQIEGKFIG-IIECGGINLKLEELEWKLSEV--GAIQSDLEENSG 131 (135)
T ss_dssp SEEEEESSSSCSEEEES-TTTTTCTTCCHHHHHHHHHHH--TSSCCCSCCCSC
T ss_pred CEEEEEECCEEEEEEEe-EEeeCCCcCCHHHHHHHHHHc--CCccccccCCCC
Confidence 9999998432 222222 1111 1146899999999986 555554454444
No 87
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.30 E-value=0.0019 Score=49.28 Aligned_cols=100 Identities=4% Similarity=0.019 Sum_probs=67.3
Q ss_pred eecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEE
Q 023016 97 VPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVW 175 (288)
Q Consensus 97 ~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~ 175 (288)
..+|.+++..+ ..+.+.++.|.. .=..-..+...+.++|+.++++.|+.+|.+......+.+|+ ..+|+++++
T Consensus 6 ~~~~~~~f~~~---~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~ 79 (110)
T 2l6c_A 6 DITTEAGMAHF---EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGF---ERVPTLVFI 79 (110)
T ss_dssp BCGGGCSHHHH---TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTC---CSSCEEEEE
T ss_pred ecCCHHHHHHH---HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCC---cccCEEEEE
Confidence 34455666332 222334444443 22345677888999999987899999999988888899999 578999988
Q ss_pred eCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 176 DGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 176 d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
.+++ ...+.+ ..+.++|.++++.+..+
T Consensus 80 ~~G~~v~~~~G-------~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAKVFSG-------IMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEEEEES-------CCCHHHHHHHHHTC---
T ss_pred ECCEEEEEEcC-------CCCHHHHHHHHHHHhhh
Confidence 6443 233333 46899999999987654
No 88
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.28 E-value=0.0039 Score=50.51 Aligned_cols=107 Identities=8% Similarity=0.110 Sum_probs=72.9
Q ss_pred CCeeecC-ccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCe
Q 023016 94 PLSVPIN-QDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPK 171 (288)
Q Consensus 94 PLV~e~n-~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPa 171 (288)
.-+.+++ .+++..+.....+.++++.|.. .-..-..+...+.++++.++++.|+.+|.+++..+.+.||+ ..+|+
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt 88 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEI---SSVPT 88 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CSSSE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCC---CCCCE
Confidence 4455665 3555542111113333444443 33445678888999999997799999999988888999999 57999
Q ss_pred EEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 172 MVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 172 i~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
++++++++ .+.+.+ .+.++|.+|++.++....
T Consensus 89 ~~~~~~G~~~~~~~G--------~~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 89 FLFFKNSQKIDRLDG--------AHAPELTKKVQRHASSGS 121 (153)
T ss_dssp EEEEETTEEEEEEES--------SCHHHHHHHHHHHSCTTS
T ss_pred EEEEECCEEEEEEeC--------CCHHHHHHHHHHHhcccc
Confidence 99998443 233332 578899999999887643
No 89
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.27 E-value=0.0023 Score=48.12 Aligned_cols=85 Identities=8% Similarity=0.130 Sum_probs=63.3
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESI 190 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~ 190 (288)
+.++++.|.. .-..-..+...++++++.++++.|+.+|.++...+.+.+|+ ..+|+++++.++. .+.+.+
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~~~G~~~~~~~g----- 97 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNV---EAMPTFIFLKDGKLVDKTVG----- 97 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHC---SSTTEEEEEETTEEEEEEEC-----
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCC---CcccEEEEEeCCEEEEEEec-----
Confidence 3444444443 33456678888999999998899999999988888999999 4789999887443 233322
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 023016 191 DEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 191 ~~e~t~e~I~~Fl~~fl~ 208 (288)
.+.+++.++++.++.
T Consensus 98 ---~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 98 ---ADKDGLPTLVAKHAT 112 (113)
T ss_dssp ---CCTTHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhhc
Confidence 577899999998864
No 90
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.26 E-value=0.0033 Score=48.06 Aligned_cols=102 Identities=9% Similarity=0.020 Sum_probs=68.6
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCC------cEEEEEeCcCchhHHhhcCCCCC
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRE------LVFCYVGIKQFADFADTFEANKK 166 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rg------l~Fv~VD~~~~~~~le~fGL~k~ 166 (288)
+.+.+++.+++.... ...+.++++.|+ ..-..-..+...+.++|+.+++ +.|+.+|.+.++ ..+ ++
T Consensus 7 ~~v~~l~~~~f~~~v-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v--- 79 (121)
T 2djj_A 7 GPVTVVVAKNYNEIV-LDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EI--- 79 (121)
T ss_dssp CSSEECCTTTTTTSS-SCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CC---
T ss_pred CCeEEecccCHHHHh-hcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--cc---
Confidence 457788888887621 123344444444 3223456778889999999863 999999998654 333 77
Q ss_pred CCCCeEEEEeCC-c--eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 167 SKLPKMVVWDGN-E--NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 167 ~~lPai~I~d~~-~--KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
..+|++++++.+ . ...+.+ ..+.++|.+|+++.+..
T Consensus 80 ~~~Pt~~~~~~~~~~~~~~~~G-------~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 80 QGFPTIKLYPAGAKGQPVTYSG-------SRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSSSEEEEECSSCTTSCCCCCC-------CSCHHHHHHHHHHTSSS
T ss_pred CcCCeEEEEeCcCCCCceEecC-------CCCHHHHHHHHHhccCc
Confidence 578999999843 3 333333 47899999999987653
No 91
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.26 E-value=0.0004 Score=54.70 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=64.1
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-Chh--------------hHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHh
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEE--------------KSQKLVTTLKAAASANRE-LVFCYVGIKQFADFAD 159 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e--------------~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le 159 (288)
+.+++.+++... ..+.+.++++.|.. .-. .-..+...+.++|+++++ +.|+.+|.+..+...+
T Consensus 5 v~~l~~~~f~~~-~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~ 83 (123)
T 1oaz_A 5 IIHLTDDSFDTD-VLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 83 (123)
T ss_dssp CEECCSTTHHHH-TTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGG
T ss_pred cEecChhhHHHH-HHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHH
Confidence 567788887641 12334455544443 112 334556678889999987 9999999998888899
Q ss_pred hcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 160 TFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 160 ~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
.+|+ ..+|+++++.++. ...+.+ ..+.+++.+|++..+
T Consensus 84 ~~~v---~~~Pt~~~~~~G~~~~~~~G-------~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 84 KYGI---RGIPTLLLFKNGEVAATKVG-------ALSKGQLKEFLDANL 122 (123)
T ss_dssp GGTC---CBSSEEEEEESSSEEEEEES-------CCCHHHHHHHHTTTC
T ss_pred HcCC---CccCEEEEEECCEEEEEEeC-------CCCHHHHHHHHHHHh
Confidence 9999 4689999886443 333333 468899999987643
No 92
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.22 E-value=0.0009 Score=54.69 Aligned_cols=104 Identities=7% Similarity=0.068 Sum_probs=64.9
Q ss_pred CeeecCccchhhhccccCCcEEEEEEccC--hhhHHHHHHHHHHHHHhcCC-cE--EEEEeCcCchhHHhhcCCCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDET--EEKSQKLVTTLKAAASANRE-LV--FCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~~--~e~~e~~~~~l~~vAk~~rg-l~--Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
-+.+++.+++... ..+.+.+++++.... -..-..+...+.++|++| + +. |+.||.++.+..++.||+ ..+
T Consensus 18 ~~~~l~~~~f~~~-i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V---~~i 92 (142)
T 2es7_A 18 GWQPVEASTVDDW-IKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNV---RRF 92 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTC---CSS
T ss_pred cCcccccccHHHH-HHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCC---CcC
Confidence 3667787887762 122233444332221 122345788899999999 7 88 999999988888899999 579
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
|+++++.+++ ...+.+ ..+.++|.+|++.+++..
T Consensus 93 PT~~~fk~G~~v~~~~G-------~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 93 PATLVFTDGKLRGALSG-------IHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SEEEEESCC----CEES-------CCCHHHHHHHHHHHHC--
T ss_pred CeEEEEeCCEEEEEEeC-------CCCHHHHHHHHHHHhccc
Confidence 9999987443 223333 468899999999988643
No 93
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.18 E-value=0.0024 Score=56.80 Aligned_cols=107 Identities=11% Similarity=0.093 Sum_probs=76.2
Q ss_pred CCCCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 92 FLPLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 92 slPLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
..|.|.++|.+++..+...+.+.++++.|+. --..-..+...+.++++++++ +.|+.||.+.++.+.+.||+ ..+
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~ 81 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGL---RAI 81 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTC---CSS
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCC---CCC
Confidence 4577999999998873222224444444432 212334566788999999999 99999999999899999999 579
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
|+++++.+++ ...+.+ ..+.+.+.+|++..+.
T Consensus 82 Pt~~~~~~G~~~~~~~g-------~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 82 PTVYLFQNGQPVDGFQG-------PQPEEAIRALLDXVLP 114 (287)
T ss_dssp SEEEEEETTEEEEEEES-------CCCHHHHHHHHHHHSC
T ss_pred CeEEEEECCEEEEEeeC-------CCCHHHHHHHHHHHcC
Confidence 9999887443 222333 4688999999998763
No 94
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.10 E-value=0.0052 Score=48.38 Aligned_cols=85 Identities=9% Similarity=0.149 Sum_probs=63.9
Q ss_pred EEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCCC
Q 023016 115 VLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDE 192 (288)
Q Consensus 115 ~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~~ 192 (288)
++++.|.. .-..-......+.+++++++++.|+.+|.++...+.+.||+ ..+|+++++.++. .+.+.+
T Consensus 48 ~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~~~G~~~~~~~G------- 117 (139)
T 3d22_A 48 IVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEI---KATPTFFFLRDGQQVDKLVG------- 117 (139)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTC---CEESEEEEEETTEEEEEEES-------
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCC---CcccEEEEEcCCeEEEEEeC-------
Confidence 33444443 33445677888999999997799999999998888999999 5789998887443 333433
Q ss_pred CCCHHHHHHHHHHHhcCc
Q 023016 193 EDQGSQISRFLEGYREGR 210 (288)
Q Consensus 193 e~t~e~I~~Fl~~fl~Gk 210 (288)
.+.+++.+|++..+.+.
T Consensus 118 -~~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 118 -ANKPELHKKITAILDSL 134 (139)
T ss_dssp -CCHHHHHHHHHHHHHTS
T ss_pred -CCHHHHHHHHHHHhccC
Confidence 37899999999998774
No 95
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.04 E-value=0.0037 Score=48.18 Aligned_cols=82 Identities=12% Similarity=0.098 Sum_probs=59.5
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESI 190 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~ 190 (288)
+.++++.|.. .-..-..+...+.++|++++++.|+.+|.++...+.+.+|+ ..+|+++++.++. ...+.+
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Pt~~~~~~G~~~~~~~G----- 101 (114)
T 2oe3_A 30 NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEV---TAMPTFVLGKDGQLIGKIIG----- 101 (114)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSBSEEEEEETTEEEEEEES-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCC---CcccEEEEEeCCeEEEEEeC-----
Confidence 3344444443 22445677788999999998899999999988888999999 5789998876443 333333
Q ss_pred CCCCCHHHHHHHHHH
Q 023016 191 DEEDQGSQISRFLEG 205 (288)
Q Consensus 191 ~~e~t~e~I~~Fl~~ 205 (288)
.. .++|.+|+++
T Consensus 102 --~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 102 --AN-PTALEKGIKD 113 (114)
T ss_dssp --SC-HHHHHHHHHT
T ss_pred --CC-HHHHHHHHHh
Confidence 23 8899998874
No 96
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.04 E-value=0.0045 Score=55.26 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=71.3
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEcc--ChhhHHHHHHHHHHHHHhcCC---cEEEEEeCc-----CchhHHhhcCC
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDE--TEEKSQKLVTTLKAAASANRE---LVFCYVGIK-----QFADFADTFEA 163 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~--~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~-----~~~~~le~fGL 163 (288)
.-|.++|.+++..+ .....++++.|+. +-- . +...|.++|+.+++ +.|+.||.+ .+..+.+.||+
T Consensus 5 ~~v~~Lt~~nF~~~--i~~~~~vlV~FyA~~pWC--g-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKV--IPKSKFVLVKFDTQYPYG--E-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHH--GGGCSEEEEEECCSSCCS--H-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHH--HcCCCCEEEEEeCCCCCC--c-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 45788999998873 2333445555553 211 1 88899999999863 999999954 37788899999
Q ss_pred CCCCCCCeEEEEeCCc---eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 164 NKKSKLPKMVVWDGNE---NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 164 ~k~~~lPai~I~d~~~---KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
....+|++.++.++. ...+.+ ..+.++|.+|++...
T Consensus 80 -~~~~~PTl~~f~~G~~~~~~~y~G-------~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 -DKESYPVFYLFRDGDFENPVPYTG-------AVKVGAIQRWLKGQG 118 (240)
T ss_dssp -CGGGCSEEEEEETTCSSCCEECCS-------CSCHHHHHHHHHHTT
T ss_pred -CCCCCCEEEEEeCCCcCcceeecC-------CCCHHHHHHHHHHhc
Confidence 322799999998432 233433 478999999999873
No 97
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.0081 Score=54.72 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=77.5
Q ss_pred CCCCeeecCccchhhhccccCCcEEEEEEc-cChhhHHHHHHHHHHHHHhcCC-cEEEEEeCc--CchhHHhhcCCCCCC
Q 023016 92 FLPLSVPINQDTLNLLKDDKRKIVLAIVED-ETEEKSQKLVTTLKAAASANRE-LVFCYVGIK--QFADFADTFEANKKS 167 (288)
Q Consensus 92 slPLV~e~n~et~~~l~~~~~~~~l~~lf~-~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~--~~~~~le~fGL~k~~ 167 (288)
.-+-|.++|.+++..+.. +.+.++++.|+ .--..-..+...+.++|+.+++ +.|+.+|.+ ....+++.||+ .
T Consensus 15 ~~~~vv~lt~~~f~~~i~-~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I---~ 90 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIH-NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDV---N 90 (298)
T ss_dssp SCTTCEECCHHHHHHHHT-SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTC---C
T ss_pred CCCCeEEeCHHHHHHHHH-hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCC---C
Confidence 345688999998887321 23333444444 3334567888999999999998 888888776 56778899999 5
Q ss_pred CCCeEEEEeCCc------------------eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 168 KLPKMVVWDGNE------------------NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 168 ~lPai~I~d~~~------------------KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
.+|++++++++. ...+.+ ..+.+.|.+|+.+.+...+
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G-------~r~~~~i~~fl~~~~~~~v 145 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSG-------ARTLAPIVDFSLSRIRSYV 145 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCS-------CCSHHHHHHHHHTTCCCCE
T ss_pred ccceEEEEECCceeecccccccccccccccceeecC-------CcCHHHHHHHHHHhccccc
Confidence 799999998432 223333 5799999999998765443
No 98
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.93 E-value=0.002 Score=53.31 Aligned_cols=102 Identities=11% Similarity=0.124 Sum_probs=72.3
Q ss_pred eeecCccchhhhccccCCcEEEEEEccC---hhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCchhHHhhcCCCCCCCCC
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDET---EEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKKSKLP 170 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~~---~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~~le~fGL~k~~~lP 170 (288)
+.++|.+++.... ....++++.|... -..-..+...+.++|++|.| +.|+-+|.++++..+..||+ ..+|
T Consensus 19 ~~~~t~~~F~~~v--~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV---~sIP 93 (140)
T 2qgv_A 19 WTPVSESRLDDWL--TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGA---FRFP 93 (140)
T ss_dssp CEECCHHHHHHHH--HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTC---CSSS
T ss_pred CccCCHHHHHHHH--hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCC---ccCC
Confidence 3477777877622 2222333344422 11223678899999999986 99999999999999999999 5799
Q ss_pred eEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 171 KMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 171 ai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+++++.+++ .....+ -.+.++|.++++.+++.
T Consensus 94 TlilFk~G~~v~~~~G-------~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 94 ATLVFTGGNYRGVLNG-------IHPWAELINLMRGLVEP 126 (140)
T ss_dssp EEEEEETTEEEEEEES-------CCCHHHHHHHHHHHHC-
T ss_pred EEEEEECCEEEEEEec-------CCCHHHHHHHHHHHhcC
Confidence 999998654 233333 46788999999999854
No 99
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.93 E-value=0.01 Score=45.83 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=60.2
Q ss_pred EEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeC----Cc-eeeccCCCC
Q 023016 115 VLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG----NE-NYLTVIGSE 188 (288)
Q Consensus 115 ~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~----~~-KY~~~~~~~ 188 (288)
++++.|.. .-..-..+...+.++|+.++++.|+.+|.+....+.+.||+ ..+|+++++++ +. .+.+.+
T Consensus 25 ~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i---~~~Pt~~~~~~~~~~G~~~~~~~G--- 98 (118)
T 2f51_A 25 LVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGV---SSIPALFFVKKEGNEIKTLDQFVG--- 98 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTC---CSSSEEEEEEEETTEEEEEEEEES---
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCC---CCCCEEEEEeCCCCcceEEEeecC---
Confidence 34444443 33445678888999999994599999999988888999999 47899998874 33 223333
Q ss_pred CCCCCCCHHHHHHHHHHHhc
Q 023016 189 SIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 189 ~~~~e~t~e~I~~Fl~~fl~ 208 (288)
...++|++.++.+..
T Consensus 99 -----~~~~~l~~~~~~~~~ 113 (118)
T 2f51_A 99 -----ADVSRIKADIEKFKH 113 (118)
T ss_dssp -----CCHHHHHHHHHHHC-
T ss_pred -----CCHHHHHHHHHHhhh
Confidence 567789999988764
No 100
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.83 E-value=0.0063 Score=48.21 Aligned_cols=101 Identities=10% Similarity=-0.066 Sum_probs=67.7
Q ss_pred eeecCccchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCCcEEEEEeC---------cCchhHHhhcCCCCC
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRELVFCYVGI---------KQFADFADTFEANKK 166 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~---------~~~~~~le~fGL~k~ 166 (288)
+.++|.+++.. .... ..++.+....-..-......+.+++++++ +.|+.+|. +++....+.||+
T Consensus 18 v~~l~~~~~~~--~~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v--- 90 (135)
T 3emx_A 18 LIYITPEEFRQ--LLQG-DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGV--- 90 (135)
T ss_dssp EEECCHHHHHH--HHTS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTC---
T ss_pred eeecCHHHHHH--HhCC-cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCC---
Confidence 45556555554 2222 22333333333445677889999999988 99999998 667778889999
Q ss_pred CCCCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 167 SKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 167 ~~lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
..+|+++++++++ ...+.+ ..+.+.+.++++..+++.
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~G-------~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLVG-------ATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp CSSSEEEEEETTEEEEEEES-------CCCHHHHHHHHHHHC---
T ss_pred ceeCeEEEEcCCEEEEEEeC-------CCCHHHHHHHHHHHhCCC
Confidence 5799999998543 333433 478999999999988764
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.85 E-value=0.00019 Score=53.17 Aligned_cols=100 Identities=6% Similarity=0.044 Sum_probs=65.4
Q ss_pred eeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEE
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMV 173 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~ 173 (288)
+.+++.+++... ....+.+++++|.. .-..-..+...++++++.+++ +.|+.+|.+......+.+|+ ..+|+++
T Consensus 3 v~~l~~~~~~~~-~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v---~~~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTDENFEQE-VLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGI---RSIPTLL 78 (106)
Confidence 445666666541 12233344444443 223345677888999999987 99999999988888899998 4689998
Q ss_pred EEeCC-ceeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 174 VWDGN-ENYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 174 I~d~~-~KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
++.++ ..+.+.+ ..+.+++.+|++..
T Consensus 79 ~~~~g~~~~~~~g-------~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNGQVVDRLVG-------AQPKEALKERIDKH 105 (106)
Confidence 87633 2232322 35677888888764
No 102
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=96.78 E-value=0.0043 Score=48.31 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=52.9
Q ss_pred HhhcccchhHHhh------hcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHcC
Q 023016 21 RNLLPLMSPFLIQ------MRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 21 ~~~~~~~~~~~~~------~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~ns 92 (288)
+.+.|.+..+-.. ..++..+.+-.+-..+++.+|++.+.|++++|++..... ..|.|..+.+.|.+||.+++
T Consensus 49 ~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~s 127 (127)
T 3h79_A 49 VAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQNT 127 (127)
T ss_dssp HHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHHC
T ss_pred HHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhcC
Confidence 4455655554322 234666666667778999999999999999999644322 56889999999999998864
No 103
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.70 E-value=0.009 Score=46.50 Aligned_cols=100 Identities=9% Similarity=0.137 Sum_probs=65.7
Q ss_pred eeecCccchhhhccccCCcEEEEEEccC--------hhhHHHHHHHHHHHHHhcCC-cEEEEEeC-------cCchhHHh
Q 023016 96 SVPINQDTLNLLKDDKRKIVLAIVEDET--------EEKSQKLVTTLKAAASANRE-LVFCYVGI-------KQFADFAD 159 (288)
Q Consensus 96 V~e~n~et~~~l~~~~~~~~l~~lf~~~--------~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~-------~~~~~~le 159 (288)
+...+.+++........+.++++.|..+ =..-......+.++++++++ +.|+.+|. +....+.+
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 4444555555421111244455555443 23456788899999999987 99999999 66677788
Q ss_pred hcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 160 TFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 160 ~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
.+|+ ..+|++++++++.+..-. ...+.+.|++|+++
T Consensus 87 ~~~i---~~~Pt~~~~~~~~~~~g~-------~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 87 NLKV---TAVPTLLKYGTPQKLVES-------ECLQANLVEMLFSE 122 (123)
T ss_dssp HHCC---CSSSEEEETTSSCEEEGG-------GGGCHHHHHHHHHC
T ss_pred HCCC---CeeCEEEEEcCCceEecc-------ccCCHHHHHHHHhc
Confidence 8999 579999999854343211 12578889998863
No 104
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.65 E-value=0.0068 Score=43.13 Aligned_cols=66 Identities=8% Similarity=0.124 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 128 QKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 128 e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
......++++++++++ +.|+.+|.++.....+.+|+ ..+|++++ + ++. .+.+ ..+.+++.+|+++.
T Consensus 18 ~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~-~-G~~-~~~G-------~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 18 PAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGI---MAVPTIVI-N-GDV-EFIG-------APTKEALVEAIKKR 84 (85)
T ss_dssp CTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTT---CCSSEEEE-T-TEE-ECCS-------SSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCC---cccCEEEE-C-CEE-eeec-------CCCHHHHHHHHHHh
Confidence 4566788999999997 99999999988788888998 47999998 4 332 2323 35788999999875
No 105
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.63 E-value=0.0077 Score=53.11 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=65.5
Q ss_pred ccCCcEEEEEEccC-hhhHHHHHHHHHHHHHh---cCC---cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceee
Q 023016 110 DKRKIVLAIVEDET-EEKSQKLVTTLKAAASA---NRE---LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYL 182 (288)
Q Consensus 110 ~~~~~~l~~lf~~~-~e~~e~~~~~l~~vAk~---~rg---l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~ 182 (288)
+.+++.+.++.... ....+++...++++|+. ++| +.|+.+|.+++++.++.||+ ...|++++.++..+|.
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv---~~~Pt~~i~~g~~~~~ 100 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKV---ERVPTVAFLGGEVRWT 100 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTC---CSSSEEEETTTTEEEE
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCC---CcCCEEEEECCceeEc
Confidence 33455444443321 34578899999999998 555 99999999999899999999 3799999885434552
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 183 TVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 183 ~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
+ .-+.+.+..|++.++++...+
T Consensus 101 --G-------~~~~~~l~~fv~~~l~~~~~~ 122 (243)
T 2hls_A 101 --G-------IPAGEEIRALVEVIMRLSEDE 122 (243)
T ss_dssp --S-------CCCTTHHHHHHHHHHHHHTTC
T ss_pred --C-------CCcHHHHHHHHHHHHhccCCC
Confidence 2 124578999999988644433
No 106
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.59 E-value=0.0064 Score=53.11 Aligned_cols=110 Identities=16% Similarity=0.271 Sum_probs=72.6
Q ss_pred CCCeeec-Cccchhhh-ccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 93 LPLSVPI-NQDTLNLL-KDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 93 lPLV~e~-n~et~~~l-~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
...|.++ +.+++..+ .....+.++++.|+. .-..-..+...+.++|++|+++.|+.+|.+ ...+.+.|++ ..+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i---~~~ 173 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSS---DVL 173 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCG---GGC
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCC---CCC
Confidence 4557777 66777652 222223444444543 334567888899999999977999999998 6566778888 578
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
|+++++.++. ...+.+..+....+++.++|.+|+..+
T Consensus 174 PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999888443 222222111113467889999999864
No 107
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.57 E-value=0.011 Score=46.70 Aligned_cols=103 Identities=12% Similarity=0.136 Sum_probs=67.7
Q ss_pred CeeecCc-cchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 95 LSVPINQ-DTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 95 LV~e~n~-et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
.+.+++. +++..+.....+.++++.|.. .=..-..+...++++++.+ ++.|+.+|.+....+.+.||+ ..+|++
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v---~~~Pt~ 96 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNI---KALPTF 96 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTC---CSSSEE
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCC---CCCCEE
Confidence 3566654 555542222233444444543 2233456677788888877 599999999988888899999 579999
Q ss_pred EEEe--CCc---eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 173 VVWD--GNE---NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 173 ~I~d--~~~---KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+++. +++ .+.+.+ .+.++|.++++.++..
T Consensus 97 ~~~~~~~g~g~~~~~~~G--------~~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEG--------ANQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEETTEEEEEEEEES--------CCHHHHHHHHHHHSEE
T ss_pred EEEEecCCCeEEEEEEcC--------CCHHHHHHHHHHHHHh
Confidence 9883 332 233333 4789999999988653
No 108
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.57 E-value=0.0069 Score=43.09 Aligned_cols=67 Identities=9% Similarity=0.042 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 128 QKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 128 e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
......++++++++++ +.|+.+|.++.....+.+|+ ..+|++++ ++. . .+.+ ..+.+++.+++++.
T Consensus 17 ~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v---~~~Pt~~~-~G~-~-~~~G-------~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 17 PMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGL---MAVPAIAI-NGV-V-RFVG-------APSREELFEAINDE 83 (85)
T ss_dssp TTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCS---SCSSEEEE-TTT-E-EEEC-------SSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCc---eeeCEEEE-CCE-E-EEcc-------CCCHHHHHHHHHHH
Confidence 3566778899999997 99999999988888899999 47999998 432 2 2223 35788999999886
Q ss_pred h
Q 023016 207 R 207 (288)
Q Consensus 207 l 207 (288)
+
T Consensus 84 l 84 (85)
T 1nho_A 84 M 84 (85)
T ss_dssp C
T ss_pred h
Confidence 5
No 109
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.56 E-value=0.038 Score=47.95 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=74.3
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC----cEEEEEeC--cCchhHHhhcCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE----LVFCYVGI--KQFADFADTFEANKKS 167 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~--~~~~~~le~fGL~k~~ 167 (288)
.|.+++.+++..... ..+.++++.|+. --..-..+...++++|+.+++ +.|+.+|. +.+..+.+.||+ .
T Consensus 13 ~v~~l~~~~f~~~i~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v---~ 88 (244)
T 3q6o_A 13 PLTLLQADTVRGAVL-GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNI---P 88 (244)
T ss_dssp SSEEECTTTHHHHHS-SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTC---C
T ss_pred CceeCChhhHHHHHh-hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCC---C
Confidence 477888888776212 233444444543 334456788999999999874 99999998 567788999999 5
Q ss_pred CCCeEEEEeCCce----eeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 168 KLPKMVVWDGNEN----YLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 168 ~lPai~I~d~~~K----Y~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
.+|++++++.+.+ .... ....+.+.|.+|+.+++....
T Consensus 89 ~~Pt~~~~~~g~~~~~g~~~~------~~g~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 89 GFPTVRFFXAFTXNGSGAVFP------VAGADVQTLRERLIDALESHH 130 (244)
T ss_dssp SSSEEEEECTTCCSSSCEECC------CTTCCHHHHHHHHHHHHHTCT
T ss_pred ccCEEEEEeCCCcCCCCeeEe------cCCCCHHHHHHHHHHHHHhcc
Confidence 7999999983211 1111 113589999999999987654
No 110
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=96.52 E-value=0.024 Score=50.79 Aligned_cols=101 Identities=12% Similarity=0.184 Sum_probs=71.9
Q ss_pred CCCeeecCccchhhhccccCCcEEEEEEc---cChhhHHHHHHHHHHHHHhcC---C-cEEEEEeCcC-----chhHHhh
Q 023016 93 LPLSVPINQDTLNLLKDDKRKIVLAIVED---ETEEKSQKLVTTLKAAASANR---E-LVFCYVGIKQ-----FADFADT 160 (288)
Q Consensus 93 lPLV~e~n~et~~~l~~~~~~~~l~~lf~---~~~e~~e~~~~~l~~vAk~~r---g-l~Fv~VD~~~-----~~~~le~ 160 (288)
-+.|.++|.+|+..+ .....++++.|+ +--. +...|.++|+.++ + +.|+-||.++ +..+.+.
T Consensus 15 ~~~v~~Lt~~nF~~v--i~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 15 CTGCVDLDELSFEKT--VERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp CTTCEECCTTTHHHH--HTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCcEECCHHHHHHH--HhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 345788999998873 334444444444 2221 8888999999883 4 9999999887 6778899
Q ss_pred cCCCCCCCCCeEEEEeCCc---eeec--cCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 161 FEANKKSKLPKMVVWDGNE---NYLT--VIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 161 fGL~k~~~lPai~I~d~~~---KY~~--~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
||+ ....+|++.++. +. ...+ .+ ..+.++|.+|++....
T Consensus 89 ~~V-~~~~~PTl~~F~-G~~~~~~~y~~~G-------~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 89 YKV-DDKNFPSIFLFK-GNADEYVQLPSHV-------DVTLDNLKAFVSANTP 132 (248)
T ss_dssp TTC-CTTSCCEEEEES-SSSSSEEECCTTS-------CCCHHHHHHHHHHHSS
T ss_pred hCC-CcCCCCeEEEEe-CCcCcceeecccC-------CCCHHHHHHHHHHhhc
Confidence 999 323799999987 43 1223 33 4789999999998753
No 111
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.49 E-value=0.02 Score=48.32 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=71.0
Q ss_pred eeecCc-cchhhhccccCCcEEEEEE-ccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeE
Q 023016 96 SVPINQ-DTLNLLKDDKRKIVLAIVE-DETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKM 172 (288)
Q Consensus 96 V~e~n~-et~~~l~~~~~~~~l~~lf-~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai 172 (288)
+.+++. +++......+...++++-| ..--..=..+...|.++|+++.+ +.|+.||.++.+++++.+|+ ...|++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V---~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYEL---YDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTC---CSSEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC---CCCCEE
Confidence 555654 4565421112333444333 33334456788999999999998 99999999999999999999 578999
Q ss_pred EEEeCCcee--eccC-CCCCCCCCCC-HHHHHHHHHHHhcCc
Q 023016 173 VVWDGNENY--LTVI-GSESIDEEDQ-GSQISRFLEGYREGR 210 (288)
Q Consensus 173 ~I~d~~~KY--~~~~-~~~~~~~e~t-~e~I~~Fl~~fl~Gk 210 (288)
+++.+++.= .+-. ....+....+ .+++.++++.++.|.
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHh
Confidence 877755331 1000 0000111344 778888887777654
No 112
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.34 E-value=0.034 Score=44.66 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=64.6
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceee--ccCCC-
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYL--TVIGS- 187 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~--~~~~~- 187 (288)
+.++++.|.. --..-..+...+.++|+++++ +.|+.+|.++...+.+.||+ ..+|+++++.+++.-. ...+.
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i---~~~Pt~~~~~~G~~v~~~~g~~~~ 99 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYEL---YDPCTVMFFFRNKHIMIDLGTGNN 99 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCS---CSSCEEEEEETTEEEEEECC----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCC---CCCCEEEEEECCcEEEEecCCCCc
Confidence 3444444443 334456788899999999988 99999999988888899999 5799999887443221 11000
Q ss_pred CCCCCCC-CHHHHHHHHHHHhcCc
Q 023016 188 ESIDEED-QGSQISRFLEGYREGR 210 (288)
Q Consensus 188 ~~~~~e~-t~e~I~~Fl~~fl~Gk 210 (288)
..+...+ +.+++.++++..++|.
T Consensus 100 ~~~~g~~~~~~~l~~~i~~~~~~~ 123 (142)
T 1qgv_A 100 NKINWAMEDKQEMVDIIETVYRGA 123 (142)
T ss_dssp --CCSCCSCHHHHHHHHHHHHHHH
T ss_pred ceeeeecCcHHHHHHHHHHHHHHH
Confidence 0011134 4889999999988874
No 113
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.31 E-value=0.007 Score=46.57 Aligned_cols=70 Identities=16% Similarity=0.208 Sum_probs=52.9
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcC
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ns 92 (288)
+.+.|.+..+--...++..+.+-.+-..+++.+|++.+.|++++|+.. .....+.| .+.+.|.+||++|.
T Consensus 36 ~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G-~~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 36 KMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFMKNG-QKLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEEEEEETT-EEEEEEES-CCHHHHHHHHHHHC
T ss_pred cCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEEEEEECC-EEEEEEeC-cCHHHHHHHHHhcC
Confidence 456677766666666777777777778999999999999999999842 22233566 58899999999863
No 114
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.31 E-value=0.0015 Score=51.72 Aligned_cols=83 Identities=12% Similarity=0.257 Sum_probs=56.4
Q ss_pred CeeecCccchhhhccccCCcEEEEEEccC-hhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCchhHHhhcCCCCC----C
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDET-EEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTFEANKK----S 167 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~~le~fGL~k~----~ 167 (288)
.+.++|.+++........+.++++.|..+ -..-..+...+.++|+++++ +.|+.+|.+++..+.+.|++ .. .
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v-~~~~~~~ 86 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKV-STSPLTK 86 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTC-CCCSSSS
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccC-cccCCcC
Confidence 46778887776532223333444444431 12234566778899999985 99999999998888899998 20 1
Q ss_pred CCCeEEEEeCC
Q 023016 168 KLPKMVVWDGN 178 (288)
Q Consensus 168 ~lPai~I~d~~ 178 (288)
.+|+++++.++
T Consensus 87 ~~Pt~~~~~~G 97 (137)
T 2dj0_A 87 QLPTLILFQGG 97 (137)
T ss_dssp CSSEEEEESSS
T ss_pred CCCEEEEEECC
Confidence 79999988744
No 115
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.18 E-value=0.048 Score=42.81 Aligned_cols=83 Identities=10% Similarity=0.030 Sum_probs=57.2
Q ss_pred cEEEEEEccC-hhhHHHHHHHH---HHHHHhcCCcEEEEEeC----cCchhHHhhcCCCCCCCCCeEEEEe-CCce---e
Q 023016 114 IVLAIVEDET-EEKSQKLVTTL---KAAASANRELVFCYVGI----KQFADFADTFEANKKSKLPKMVVWD-GNEN---Y 181 (288)
Q Consensus 114 ~~l~~lf~~~-~e~~e~~~~~l---~~vAk~~rgl~Fv~VD~----~~~~~~le~fGL~k~~~lPai~I~d-~~~K---Y 181 (288)
.++++.|..+ -..-..+...+ .++++.++++.|+.+|. +....+++.||+ ..+|++++++ ++.. +
T Consensus 32 k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v---~~~Pt~~~~d~~G~~v~~~ 108 (134)
T 2fwh_A 32 KPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV---LGLPTILFFDGQGQEHPQA 108 (134)
T ss_dssp SCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC---CSSSEEEEECTTSCBCGGG
T ss_pred CcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC---CCCCEEEEECCCCCEeeee
Confidence 3444444432 23334556666 78888888899999998 445667889999 4789999997 4433 3
Q ss_pred eccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 182 LTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 182 ~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
.+.+ ..+.+++.++++..
T Consensus 109 ~~~G-------~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 109 RVTG-------FMDAETFSAHLRDR 126 (134)
T ss_dssp CBCS-------CCCHHHHHHHHHHC
T ss_pred eeee-------ccCHHHHHHHHHhc
Confidence 4433 57899999999864
No 116
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.17 E-value=0.037 Score=47.00 Aligned_cols=88 Identities=11% Similarity=0.171 Sum_probs=62.1
Q ss_pred CCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcC--chhHHhhcCCCCCCCCCeEEEEeCCc--eeeccCC
Q 023016 112 RKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQ--FADFADTFEANKKSKLPKMVVWDGNE--NYLTVIG 186 (288)
Q Consensus 112 ~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~--~~~~le~fGL~k~~~lPai~I~d~~~--KY~~~~~ 186 (288)
.++.++++... .-..-..+...++++|+...++.|+.+|.++ +.+.++.||+ ..+|+++++.++. ...+.+
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~~G- 97 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRI---DRAPATTITQDGKDFGVRYFG- 97 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTC---CSSSEEEEEETTBCCSEEEES-
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCC---CcCceEEEEcCCceeeEEEec-
Confidence 44444444433 3445678999999999764339999999998 8888999999 4789999987332 122222
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcC
Q 023016 187 SESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 187 ~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
..+.+.+.+|+..+++.
T Consensus 98 ------~~~~~~l~~~l~~~l~~ 114 (226)
T 1a8l_A 98 ------LPAGHEFAAFLEDIVDV 114 (226)
T ss_dssp ------CCCTTHHHHHHHHHHHH
T ss_pred ------cCcHHHHHHHHHHHHhh
Confidence 24667899999998753
No 117
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.17 E-value=0.043 Score=44.44 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=65.2
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCcee--eccCCC-
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENY--LTVIGS- 187 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY--~~~~~~- 187 (288)
+.++++.|.. --..-......+.++|+++++ +.|+.+|.++.+.+++.|++ ..+|++++..++..- .+..++
T Consensus 23 ~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v---~~~Pt~~~~~~G~~v~~~~g~~~~ 99 (149)
T 3gix_A 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDI---SYIPSTVFFFNGQHMKVDYGSPDH 99 (149)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTC---CSSSEEEEEETTEEEEEECSSSCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCC---CccCeEEEEECCeEEEeecCCCCC
Confidence 3444444443 224456788899999999999 99999999998899999999 578999977644322 111110
Q ss_pred CCCCC-CCCHHHHHHHHHHHhcCc
Q 023016 188 ESIDE-EDQGSQISRFLEGYREGR 210 (288)
Q Consensus 188 ~~~~~-e~t~e~I~~Fl~~fl~Gk 210 (288)
..+.. ..+.+++.++++....|.
T Consensus 100 ~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 100 TKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp SCEESCCSSHHHHHHHHHHHHHHH
T ss_pred CeEeeecCCHHHHHHHHHHHHHHh
Confidence 01112 457899999999887654
No 118
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.14 E-value=0.024 Score=50.70 Aligned_cols=110 Identities=17% Similarity=0.275 Sum_probs=72.1
Q ss_pred CCCeeec-Cccchhhh-ccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCC
Q 023016 93 LPLSVPI-NQDTLNLL-KDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKL 169 (288)
Q Consensus 93 lPLV~e~-n~et~~~l-~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~l 169 (288)
...|.++ +.+++... .....+.++++.|+. .-..-..+...|.++|++|+++.|+.||.+. ..+++.|++ ..+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I---~~~ 186 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSS---DVL 186 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCT---TTC
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCC---CCC
Confidence 4467777 56777652 222234444444443 3344567888999999999889999999875 456777888 579
Q ss_pred CeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 170 PKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 170 Pai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
|+++++.++. ...+.+..+.....++.+.|..|+...
T Consensus 187 PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 9999998543 222322111112357899999999875
No 119
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.09 E-value=0.0018 Score=50.10 Aligned_cols=72 Identities=10% Similarity=0.165 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 129 KLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 129 ~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
.+...+.++++.++++.|+.+|.+....+.+.||+ ..+|+++++.++. ...+. ..+.+++.+|++.++
T Consensus 53 ~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v---~~~Pt~~~~~~g~~~~~~~--------g~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 53 FIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNV---EAMPTFLFIKDGAEADKVV--------GARKDDLQNTIVKHV 121 (130)
T ss_dssp SSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTC---CSSCCCCBCTTTTCCBCCC--------TTCTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCC---CccceEEEEeCCeEEEEEe--------CCCHHHHHHHHHHHH
Confidence 44566788889888899999999988888999999 5789998876333 22222 246788999999988
Q ss_pred cCcc
Q 023016 208 EGRT 211 (288)
Q Consensus 208 ~Gkl 211 (288)
....
T Consensus 122 ~~~~ 125 (130)
T 1wmj_A 122 GATA 125 (130)
T ss_dssp SSSC
T ss_pred hccC
Confidence 7543
No 120
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.05 E-value=0.084 Score=40.84 Aligned_cols=75 Identities=11% Similarity=0.132 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHHhcCC-cEEEEEeCc---------------------------CchhHHhhcCCCCCCCCCeEEEEe
Q 023016 125 EKSQKLVTTLKAAASANRE-LVFCYVGIK---------------------------QFADFADTFEANKKSKLPKMVVWD 176 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~---------------------------~~~~~le~fGL~k~~~lPai~I~d 176 (288)
..-......+.++++++++ +.|+.++.+ ....+.+.||+ ..+|++++.|
T Consensus 42 ~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~~~lid 118 (148)
T 2b5x_A 42 HLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFEN---EYVPAYYVFD 118 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCC---CCSSEEEEEC
T ss_pred HHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCC---CCCCEEEEEC
Confidence 3456778889999999988 888888743 23456778888 4789999998
Q ss_pred -CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 177 -GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 177 -~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
++. .+.+.+ ..+.+++.++++..+++
T Consensus 119 ~~G~i~~~~~g-------~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 119 KTGQLRHFQAG-------GSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp TTCBEEEEEES-------CSTTHHHHHHHHHHHTT
T ss_pred CCCcEEEEecC-------CCCHHHHHHHHHHHHhc
Confidence 443 343433 35788999999998765
No 121
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.01 E-value=0.06 Score=41.76 Aligned_cols=82 Identities=12% Similarity=0.212 Sum_probs=56.8
Q ss_pred hHHHHHHHHH--HHHHhcCC-cEEEEEeC---cCchhHHhhcCCCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHH
Q 023016 126 KSQKLVTTLK--AAASANRE-LVFCYVGI---KQFADFADTFEANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGS 197 (288)
Q Consensus 126 ~~e~~~~~l~--~vAk~~rg-l~Fv~VD~---~~~~~~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e 197 (288)
.-..+...+. ++++.+++ +.|+.+|. +.+..+++.||+.....+|++++++ ++. .+...++.-......+.+
T Consensus 43 ~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~ 122 (133)
T 3fk8_A 43 DCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQ 122 (133)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHH
T ss_pred HHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHH
Confidence 3456667788 88888877 99999999 7778888999882114799999997 443 343332110001146899
Q ss_pred HHHHHHHHHh
Q 023016 198 QISRFLEGYR 207 (288)
Q Consensus 198 ~I~~Fl~~fl 207 (288)
++.+|++...
T Consensus 123 ~l~~~l~~l~ 132 (133)
T 3fk8_A 123 GIYDFFAKIT 132 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 122
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.99 E-value=0.013 Score=44.75 Aligned_cols=100 Identities=12% Similarity=0.087 Sum_probs=63.5
Q ss_pred CCCeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCc----CchhHHhhcCCCCC
Q 023016 93 LPLSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIK----QFADFADTFEANKK 166 (288)
Q Consensus 93 lPLV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~----~~~~~le~fGL~k~ 166 (288)
+.-+..++.+++... ...+.++++.|.. .=..-..+...+.++|+.++. +.|+-++.. .+..+.+.+|+
T Consensus 11 ~~~~~~~~~~~~~~~--~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i--- 85 (118)
T 1zma_A 11 IKDLEVTTVVRAQEA--LDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGI--- 85 (118)
T ss_dssp TTTSEECCHHHHHHH--HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTC---
T ss_pred HhhhhcCCHHHHHHH--HhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCC---
Confidence 444667777766652 2223344444443 334456788889999998876 777755433 23456788999
Q ss_pred CCCCeEEEEeCCc-eeeccCCCCCCCCCCCHHHHHHHHH
Q 023016 167 SKLPKMVVWDGNE-NYLTVIGSESIDEEDQGSQISRFLE 204 (288)
Q Consensus 167 ~~lPai~I~d~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~ 204 (288)
..+|+++++.++. ...+.+ ..+.++|.+|++
T Consensus 86 ~~~Pt~~~~~~G~~~~~~~G-------~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQINVRCDS-------SMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEEEEECCT-------TCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEEEEEecC-------CCCHHHHHHHhh
Confidence 5789999887443 223333 468899999875
No 123
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.95 E-value=0.016 Score=44.65 Aligned_cols=77 Identities=14% Similarity=0.131 Sum_probs=56.1
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCeee
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVP 98 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~e 98 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++...|++++|+. ++...+.|..+.+.|.+||.....+.+.+
T Consensus 38 ~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 38 QNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCKD--GEFRRYQGPRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCCCHHHHHHHHHTCGGGGSCE
T ss_pred HHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEEeC--CeEEEeecCCCHHHHHHHHHHHhhccCCC
Confidence 344555555444333 57777777777789999999999999999963 34456788889999999999876555544
Q ss_pred c
Q 023016 99 I 99 (288)
Q Consensus 99 ~ 99 (288)
+
T Consensus 116 ~ 116 (126)
T 1x5e_A 116 V 116 (126)
T ss_dssp E
T ss_pred c
Confidence 4
No 124
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=95.83 E-value=0.074 Score=40.88 Aligned_cols=88 Identities=11% Similarity=0.109 Sum_probs=58.7
Q ss_pred cEEEEEEccC-hhhHHHHHHHH---HHHHHhcCC-cEEEEEeCc--CchhHHhhcCCCCCCCCCeEEEEe-CCc-eeecc
Q 023016 114 IVLAIVEDET-EEKSQKLVTTL---KAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWD-GNE-NYLTV 184 (288)
Q Consensus 114 ~~l~~lf~~~-~e~~e~~~~~l---~~vAk~~rg-l~Fv~VD~~--~~~~~le~fGL~k~~~lPai~I~d-~~~-KY~~~ 184 (288)
.++++.|..+ -..-......+ ..+++.+++ +.++.+|.+ ....+++.+|+ ..+|++++++ ++. .+.+.
T Consensus 28 k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~~G~~~~~~~ 104 (130)
T 2kuc_A 28 KLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGV---HAYPTLLFINSSGEVVYRLV 104 (130)
T ss_dssp SCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTC---CSSCEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCC---CCCCEEEEECCCCcEEEEec
Confidence 3444444432 22334555555 556666555 889999987 46677899999 5789999997 443 34443
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 185 IGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 185 ~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
+ ..+.+++.+|++..+.+.-
T Consensus 105 G-------~~~~~~l~~~l~~~~~~~~ 124 (130)
T 2kuc_A 105 G-------AEDAPELLKKVKLGVESEG 124 (130)
T ss_dssp S-------CCCHHHHHHHHHHHHSCCC
T ss_pred C-------CCCHHHHHHHHHHHHHhcc
Confidence 3 4688999999999887643
No 125
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.75 E-value=0.087 Score=51.89 Aligned_cols=106 Identities=10% Similarity=0.025 Sum_probs=74.5
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC----cEEEEEeCc--CchhHHhhcCCCCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE----LVFCYVGIK--QFADFADTFEANKKS 167 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg----l~Fv~VD~~--~~~~~le~fGL~k~~ 167 (288)
.|.+++.+++..... ..+.++++.|+. -=..-..+...++++|+++++ +.|+.+|.+ ++.++.+.||+ .
T Consensus 13 ~V~~Lt~~~f~~~v~-~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V---~ 88 (519)
T 3t58_A 13 PLTLLDADSVRPTVL-GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNI---A 88 (519)
T ss_dssp SSEEECTTTHHHHHS-SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTC---C
T ss_pred CcEECChHHHHHHHH-hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCC---c
Confidence 377888888876212 233444444543 223456788899999999875 999999985 47788999999 5
Q ss_pred CCCeEEEEeCCce-----eeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 168 KLPKMVVWDGNEN-----YLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 168 ~lPai~I~d~~~K-----Y~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
.+|++++++.+.+ ....+ ..+.+.|.+|+++++....
T Consensus 89 ~~PTl~~f~~g~~~G~~~~~~~g-------~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 89 GFPTVRFFQAFTKNGSGATLPGA-------GANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SBSEEEEECTTCCSCCCEEECCS-------SCCHHHHHHHHHHHHTTCC
T ss_pred ccCEEEEEcCcccCCCceeEecC-------CCCHHHHHHHHHHHHhhcc
Confidence 7999999983211 11222 4789999999999987543
No 126
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.74 E-value=0.26 Score=38.77 Aligned_cols=93 Identities=12% Similarity=0.004 Sum_probs=59.7
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcC------------------------chhHHhhcCCCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ------------------------FADFADTFEANK 165 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~------------------------~~~~le~fGL~k 165 (288)
+.++++.|.. .-..-......+.++++++++ +.|+.++.+. ...+++.||. .
T Consensus 24 gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (151)
T 3raz_A 24 APVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN-T 102 (151)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC-C
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC-c
Confidence 3444444443 223355677889999999865 8888887652 2234566672 2
Q ss_pred CCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 166 KSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 166 ~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
-..+|+.++.+ ++. .+.+.+ ..+.+++.++++..++++-..
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~l~~~~~~~ 145 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITG-------EVNEKSLTDAVKLAHSKCREG 145 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCS-------CCCHHHHHHHHHHHHTC----
T ss_pred cCCCCEEEEECCCCcEEEEECC-------CCCHHHHHHHHHHHHHHhhcc
Confidence 25789999998 443 455544 578999999999999886544
No 127
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.72 E-value=0.03 Score=43.15 Aligned_cols=71 Identities=11% Similarity=0.059 Sum_probs=51.1
Q ss_pred HhhcccchhHHhhhcc-eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+. +..+.+-.+-..+++..|++...|++++|++.......|.|..+.+.|.+||...
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 51 QRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSA 122 (130)
T ss_dssp GGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred HhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHH
Confidence 3445555554444333 5555566677789999999999999999986433245678888999999999875
No 128
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.70 E-value=0.024 Score=43.76 Aligned_cols=70 Identities=11% Similarity=-0.000 Sum_probs=51.4
Q ss_pred HhhcccchhHHhhh-----cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQM-----RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~-----~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.... .++..+.+-.+-..+++..|++...|++++|++ ......|.|..+.+.|.+||...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 41 KNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDL 115 (133)
T ss_dssp HTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHH
T ss_pred HhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHH
Confidence 34455555544443 356677677777789999999999999999986 33334578888999999999864
No 129
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=95.69 E-value=0.27 Score=38.90 Aligned_cols=89 Identities=7% Similarity=0.051 Sum_probs=57.0
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCchhHHhhc---------------------------CC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFADFADTF---------------------------EA 163 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~~le~f---------------------------GL 163 (288)
.++++.|.. .-..-......+.++++++++ +.|+.++.+.....+..| |+
T Consensus 35 k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 114 (165)
T 3or5_A 35 KAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGI 114 (165)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCS
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCC
Confidence 344444443 223456777888999999887 888888876543333222 45
Q ss_pred CCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCccc
Q 023016 164 NKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 164 ~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklk 212 (288)
..+|.+++.+ ++. .+.+.+ ..+.+++.++++..++....
T Consensus 115 ---~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 115 ---TGIPTSFVIDASGNVSGVIVG-------PRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp ---CSSSEEEEECTTSBEEEEECS-------CCCHHHHHHHHHHHHC----
T ss_pred ---CCCCeEEEECCCCcEEEEEcC-------CCCHHHHHHHHHHHHhhhcc
Confidence 4689999998 443 344433 46899999999999875443
No 130
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=95.69 E-value=0.02 Score=42.54 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=51.7
Q ss_pred HhhcccchhHHhhh----cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQM----RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~----~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.... .++..+.+-.+-..+++..|++.+.|++++|++. .....+.|..+.+.|.+||+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 37 KTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp HHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 34556555554433 3566666777777899999999999999999742 2233578888999999999875
No 131
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.63 E-value=0.026 Score=43.51 Aligned_cols=74 Identities=18% Similarity=0.128 Sum_probs=54.6
Q ss_pred HhhcccchhHHhhh-cceeeEeee--ccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCC
Q 023016 21 RNLLPLMSPFLIQM-RKFLTLLKM--LDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP 94 (288)
Q Consensus 21 ~~~~~~~~~~~~~~-~k~~~v~~~--~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslP 94 (288)
+.+.|.+..+.... .++..+.+- .+-..+++..|++...|++++|++.......+.|..+.+.|.+||+...-+
T Consensus 42 ~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 42 VEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp HHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 44556555555444 567777777 677789999999999999999985333333467888999999999987443
No 132
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=95.57 E-value=0.023 Score=44.14 Aligned_cols=70 Identities=14% Similarity=0.056 Sum_probs=53.1
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||+.+
T Consensus 58 ~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 58 TMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKN-KTMLARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEET-TEEEEEESSCCCHHHHHHHHTTC
T ss_pred HHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEEC-CEEEEEecCCCCHHHHHHHHHhC
Confidence 455666666655543 68888888888899999999999999999963 22233467888999999999753
No 133
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=95.57 E-value=0.026 Score=41.60 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=50.5
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||+..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 36 KMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRD-GKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEeC-CEEEEEecCCCCHHHHHHHHHhc
Confidence 344555555444443 57777777777889999999999999999953 22223467888999999999864
No 134
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=95.57 E-value=0.19 Score=39.46 Aligned_cols=90 Identities=12% Similarity=0.072 Sum_probs=58.0
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcC----------------------chhHHhhcCCCCCCC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ----------------------FADFADTFEANKKSK 168 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~----------------------~~~~le~fGL~k~~~ 168 (288)
.++++.|.. .-..-......+.++++++++ +.|+.++.+. ...+.+.||+ ..
T Consensus 27 k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~ 103 (151)
T 2f9s_A 27 KGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV---SP 103 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC---CS
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC---CC
Confidence 344444443 223445677788888888875 7777776643 2345677888 46
Q ss_pred CCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 169 LPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 169 lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
.|++++.| ++. .+.+.+ ..+.+++.++++..+++...+
T Consensus 104 ~P~~~lid~~G~i~~~~~G-------~~~~~~l~~~l~~ll~~~~~~ 143 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTG-------TMTESMIHDYMNLIKPGETSG 143 (151)
T ss_dssp SCEEEEECTTSEEEEEEES-------CCCHHHHHHHHHHHSCC----
T ss_pred CCeEEEECCCCcEEEEEeC-------CCCHHHHHHHHHHHHhhhhcc
Confidence 89999998 443 343433 468999999999998876654
No 135
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=95.47 E-value=0.02 Score=43.33 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=51.9
Q ss_pred hhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCC
Q 023016 22 NLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP 94 (288)
Q Consensus 22 ~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslP 94 (288)
.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+|+..+.-|
T Consensus 34 ~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 34 MIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKD-GEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp GHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEET-TEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeC-CEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 34444444444432 57777777777889999999999999999952 22233478888999999999987543
No 136
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=95.47 E-value=0.27 Score=37.35 Aligned_cols=87 Identities=9% Similarity=0.009 Sum_probs=56.3
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcC----------------------chhHHhhcCCCCCCCCC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQ----------------------FADFADTFEANKKSKLP 170 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~----------------------~~~~le~fGL~k~~~lP 170 (288)
.++++.|.. .-..-......+.+++++++++.|+.++.+. ...+.+.+|+ ..+|
T Consensus 25 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---~~~P 101 (136)
T 1lu4_A 25 KPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV---PWQP 101 (136)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC---CSSS
T ss_pred CEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC---CCCC
Confidence 344444443 2234566778888999999888888887654 3456677888 4689
Q ss_pred eEEEEe-CCceeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 171 KMVVWD-GNENYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 171 ai~I~d-~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
++++.+ ++..-.+... ....+.+++.++++..+
T Consensus 102 ~~~lid~~G~i~~~~~~----~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 102 AFVFYRADGTSTFVNNP----TAAMSQDELSGRVAALT 135 (136)
T ss_dssp EEEEECTTSCEEEECCS----SSCCCHHHHHHHHHHC-
T ss_pred EEEEECCCCcEEEEEcC----CCccCHHHHHHHHHHHh
Confidence 999998 4432122200 12468999999998764
No 137
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=95.46 E-value=0.041 Score=43.11 Aligned_cols=70 Identities=13% Similarity=0.249 Sum_probs=53.9
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|.+. ++...+.|..+.+.|.+||...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~-g~~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 67 KMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMK-GEPQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSS-SCCEEEESCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCC-CCEEEEeCCCCHHHHHHHHHHH
Confidence 344566665555544 577777888888999999999999999999653 3444678888999999999865
No 138
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.43 E-value=0.28 Score=38.37 Aligned_cols=92 Identities=7% Similarity=-0.001 Sum_probs=57.5
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCch----------------------hHHhhcCCCCCCC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA----------------------DFADTFEANKKSK 168 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~----------------------~~le~fGL~k~~~ 168 (288)
.++++.|.. .-..-......+.++++++++ +.|+.++.+... .+.+.||+ ..
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~ 105 (152)
T 3gl3_A 29 SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGV---KG 105 (152)
T ss_dssp SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTC---CS
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCC---CC
Confidence 344444433 223355677788889888877 788888766332 34566788 46
Q ss_pred CCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 169 LPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 169 lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
+|++++.+ ++. .+...+ ....+.+++.++++..+.+.-.+
T Consensus 106 ~P~~~lid~~G~i~~~~~g-----~~~~~~~~l~~~i~~~~~~~~~~ 147 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVG-----FRPADKEALEQQILAALGGNEGH 147 (152)
T ss_dssp SSEEEEECTTSBEEEEEES-----CCTTTHHHHHHHHHHHTC-----
T ss_pred CCeEEEECCCCCEEEEEcc-----CCCcCHHHHHHHHHHHHcccccc
Confidence 89999888 443 344433 22346789999999988876544
No 139
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.40 E-value=0.23 Score=38.88 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeC-----------------------cCchhHHhhcCCCCCCCCCeEEEEe-CCc-
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGI-----------------------KQFADFADTFEANKKSKLPKMVVWD-GNE- 179 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~-----------------------~~~~~~le~fGL~k~~~lPai~I~d-~~~- 179 (288)
-......++++++++++ +.|+.++. +....+.+.||+ ...|.+++.+ ++.
T Consensus 43 C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---~~~P~~~lid~~G~i 119 (153)
T 2l5o_A 43 CVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT---QVYPTSVLIGKKGEI 119 (153)
T ss_dssp HHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC---CSSSEEEEECSSSCC
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC---CccCeEEEECCCCcE
Confidence 45667778888888875 67766552 123356777888 4689999998 432
Q ss_pred eeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccc
Q 023016 180 NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKV 216 (288)
Q Consensus 180 KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iK 216 (288)
.+.+.+ ..+.+++.++++..+++.-.+...
T Consensus 120 ~~~~~g-------~~~~~~l~~~l~~ll~~~~~~~~~ 149 (153)
T 2l5o_A 120 LKTYVG-------EPDFGKLYQEIDTAWRNSDAEGHH 149 (153)
T ss_dssp CEEEES-------SCCHHHHHHHHHHHHHCCSSCCTT
T ss_pred EEEEcC-------CCCHHHHHHHHHHHHHhhhhcccc
Confidence 333433 468999999999999987766433
No 140
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.39 E-value=0.28 Score=47.74 Aligned_cols=134 Identities=12% Similarity=0.109 Sum_probs=87.7
Q ss_pred CCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH----cCCCCeeecCccchhhhccccCCcEEEEEEccChhhHHHHHH
Q 023016 57 DKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ----NFLPLSVPINQDTLNLLKDDKRKIVLAIVEDETEEKSQKLVT 132 (288)
Q Consensus 57 ~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~----nslPLV~e~n~et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~ 132 (288)
+..|++.+.++.......|.|-=-..++..||.. ...| ..+++++...+.....+..+.++....=..=..+..
T Consensus 60 ~~~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~ 137 (521)
T 1hyu_A 60 VRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHP--SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQ 137 (521)
T ss_dssp SCSSEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHTTCC--CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHH
T ss_pred cCCCEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhcCCC--CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHH
Confidence 3569999998644445678773233445555544 5555 466777777653333343333333322223457788
Q ss_pred HHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 133 TLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 133 ~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
.+.++|..+.++.|..+|.+.+++.++.+|+ ...|++++ | ++.. ..+ ..+.++|.++++.
T Consensus 138 ~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i---~svPt~~i-~-g~~~-~~G-------~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 138 ALNLMAVLNPRIKHTAIDGGTFQNEITERNV---MGVPAVFV-N-GKEF-GQG-------RMTLTEIVAKVDT 197 (521)
T ss_dssp HHHHHHHHCTTEEEEEEETTTCHHHHHHTTC---CSSSEEEE-T-TEEE-EES-------CCCHHHHHHHHCC
T ss_pred HHHHHHhHcCceEEEEEechhhHHHHHHhCC---CccCEEEE-C-CEEE-ecC-------CCCHHHHHHHHhh
Confidence 8999999987799999999999999999999 47899987 3 3222 112 3678888888755
No 141
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.34 E-value=0.22 Score=39.16 Aligned_cols=76 Identities=13% Similarity=0.023 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEeC---------------------------cCchhHHhhcCCCCCCCCCeEEEEe-
Q 023016 125 EKSQKLVTTLKAAASANRELVFCYVGI---------------------------KQFADFADTFEANKKSKLPKMVVWD- 176 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rgl~Fv~VD~---------------------------~~~~~~le~fGL~k~~~lPai~I~d- 176 (288)
..-......+.++++++ ++.|+.++. +....+.+.||+ ..+|++++.+
T Consensus 43 ~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v---~~~P~~~lid~ 118 (154)
T 3ia1_A 43 TVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV---LGQPWTFVVDR 118 (154)
T ss_dssp HHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB---CSSCEEEEECT
T ss_pred hhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC---CcccEEEEECC
Confidence 34566778888888888 867777766 234456788888 4789999998
Q ss_pred CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 177 GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 177 ~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
++. .+...+ ..+.+++.+++++...+.=
T Consensus 119 ~G~i~~~~~g-------~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 119 EGKVVALFAG-------RAGREALLDALLLAGADLE 147 (154)
T ss_dssp TSEEEEEEES-------BCCHHHHHHHHHHTTCCC-
T ss_pred CCCEEEEEcC-------CCCHHHHHHHHHhccCccc
Confidence 443 344433 4689999999999877653
No 142
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=95.31 E-value=0.31 Score=38.43 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=58.0
Q ss_pred cEEEEEEccC-hhhHHHHHHHHHHHHHhcCC--cEEEEEeCcC-------------------------chhHHhhcCCCC
Q 023016 114 IVLAIVEDET-EEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-------------------------FADFADTFEANK 165 (288)
Q Consensus 114 ~~l~~lf~~~-~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~-------------------------~~~~le~fGL~k 165 (288)
.++++.|..+ -..-......+.++++++++ +.|+.++.+. ...+.+.||+
T Consensus 30 k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v-- 107 (152)
T 2lrn_A 30 KYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI-- 107 (152)
T ss_dssp SEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC--
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC--
Confidence 3444444331 22345667778888888876 8888887664 3456778888
Q ss_pred CCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 166 KSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 166 ~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
..+|++++.| ++. .+.. .+.+++.++++..+++..+.
T Consensus 108 -~~~P~~~lid~~G~i~~~~----------~~~~~l~~~l~~l~~~~~~~ 146 (152)
T 2lrn_A 108 -VGFPHIILVDPEGKIVAKE----------LRGDDLYNTVEKFVNGAKEG 146 (152)
T ss_dssp -CSSCEEEEECTTSEEEEEC----------CCTTHHHHHHHHHHTSSSSC
T ss_pred -CcCCeEEEECCCCeEEEee----------CCHHHHHHHHHHHHhhcccc
Confidence 4689999998 443 3322 35678999999988876543
No 143
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.30 E-value=0.11 Score=45.55 Aligned_cols=103 Identities=13% Similarity=0.188 Sum_probs=65.3
Q ss_pred cCCCCeeecCc-cchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCC
Q 023016 91 NFLPLSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSK 168 (288)
Q Consensus 91 nslPLV~e~n~-et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~ 168 (288)
.+.|.+.+++. +....+ .......++.+|.+.+ ....+.|.++|..+|+ +.|+.+.. ..+++.+++ +
T Consensus 3 ~~gP~v~~l~s~~~~~~~-l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~~---~~v~~~~~~-~--- 71 (252)
T 2h8l_A 3 LGSPASVPLRTEEEFKKF-ISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTNV---ESLVNEYDD-N--- 71 (252)
T ss_dssp ---CCEEECCSHHHHHHH-HTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEECC---HHHHHHHCS-S---
T ss_pred cCCCCceeecCHHHHHHH-hhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEECh---HHHHHHhCC-C---
Confidence 46788999964 444442 1223344444454322 2456789999999999 99999854 357788898 3
Q ss_pred CCeEEEEeCC--------ceeec-cCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 169 LPKMVVWDGN--------ENYLT-VIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 169 lPai~I~d~~--------~KY~~-~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
.|+++++..+ ....+ .+ +++.+.|.+|++.-.-..+
T Consensus 72 ~p~i~~fk~~~~~~kf~e~~~~y~~g-------~~~~~~l~~fi~~~~~Plv 116 (252)
T 2h8l_A 72 GEGIILFRPSHLTNKFEDKTVAYTEQ-------KMTSGKIKKFIQENIFGIC 116 (252)
T ss_dssp SEEEEEECCGGGCCTTSCSEEECCCS-------SCCHHHHHHHHHHHSSCSS
T ss_pred CCcEEEEcchhhcccccccccccCCC-------CcCHHHHHHHHHhcccCCe
Confidence 3888877631 12223 22 5799999999999765443
No 144
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=95.26 E-value=0.39 Score=36.26 Aligned_cols=84 Identities=11% Similarity=-0.001 Sum_probs=55.6
Q ss_pred EEEEEEc-cChhhHHHHHHHHHHHHHhcCCcEEEEEeCcC-----------------------chhHHhhcCCCCCCCCC
Q 023016 115 VLAIVED-ETEEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKSKLP 170 (288)
Q Consensus 115 ~l~~lf~-~~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~-----------------------~~~~le~fGL~k~~~lP 170 (288)
++++.|. ..-..-......+++++++++++.|+.++.+. ...+.+.||+ ..+|
T Consensus 27 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---~~~P 103 (136)
T 1zzo_A 27 PAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV---TQQP 103 (136)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC---CSSS
T ss_pred eEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC---CCCc
Confidence 3343343 33344567788889999998888888887642 2345677787 4689
Q ss_pred eEEEEe-CCceeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 171 KMVVWD-GNENYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 171 ai~I~d-~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
++++.+ ++..-.+.+ ..+.++|.++++..++
T Consensus 104 ~~~~id~~g~i~~~~g-------~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 104 AYAFVDPHGNVDVVRG-------RMSQDELTRRVTALTS 135 (136)
T ss_dssp EEEEECTTCCEEEEES-------CCCHHHHHHHHHHHC-
T ss_pred eEEEECCCCCEEEEec-------CCCHHHHHHHHHHHhc
Confidence 999998 443212333 4679999999988653
No 145
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=95.26 E-value=0.038 Score=40.14 Aligned_cols=69 Identities=16% Similarity=0.106 Sum_probs=50.3
Q ss_pred hhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.+.|.+..+....+++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||...
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 33 ILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFFKD-GEPVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCEEEEEEC-CeEhhhccCCCCHHHHHHHHHHH
Confidence 3445555555555556677777777889999999999999999963 22223467888899999999864
No 146
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=95.24 E-value=0.04 Score=40.51 Aligned_cols=70 Identities=14% Similarity=0.250 Sum_probs=51.3
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+..... ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||...
T Consensus 34 ~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 34 RMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKD-GQPVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp HHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC-CcEeeeEeCCCCHHHHHHHHHHH
Confidence 334455555554444 57777777788899999999999999999953 22223467888899999999865
No 147
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=95.17 E-value=0.17 Score=39.54 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=57.9
Q ss_pred CcEEEEEEccC-hhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCch-----------------------hHHhhcCCCCC
Q 023016 113 KIVLAIVEDET-EEKSQKLVTTLKAAASANRE--LVFCYVGIKQFA-----------------------DFADTFEANKK 166 (288)
Q Consensus 113 ~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~-----------------------~~le~fGL~k~ 166 (288)
+.++++.|..+ -..-......+.++++++++ +.|+.++.+... .+.+.||+
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--- 106 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI--- 106 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC---
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc---
Confidence 34444444431 12234556677788888876 888888766432 45677787
Q ss_pred CCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 167 SKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 167 ~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
..+|++++.+ ++. .+...+ ..+.+++.++++...++.=
T Consensus 107 ~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 107 NGIPRFILLDRDGKIISANMT-------RPSDPKTAEKFNELLGLEG 146 (152)
T ss_dssp CSSCCEEEECTTSCEEESSCC-------CTTCHHHHHHHHHHHTCCS
T ss_pred CCCCEEEEECCCCeEEEccCC-------CCCHHHHHHHHHHHhcccc
Confidence 4689999998 443 343322 4678999999999887653
No 148
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=95.14 E-value=0.043 Score=40.40 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=52.3
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~-g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 37 HLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFVN-GQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEcC-CcEEEeeeccCCHHHHHHHHHHH
Confidence 344566666555554 57777777888899999999999999999963 22233477888999999999864
No 149
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.13 E-value=0.042 Score=46.66 Aligned_cols=79 Identities=13% Similarity=0.078 Sum_probs=57.2
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCeeec
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPI 99 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~e~ 99 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||....-+.+.++
T Consensus 130 ~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i 208 (210)
T 3apq_A 130 HDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRS-GMAAVKYNGDRSKESLVAFAMQHVRSTVTEL 208 (210)
T ss_dssp HHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEECT-TSCCEECCSCCCHHHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEEEC-CCceeEecCCCCHHHHHHHHHHhCcccceec
Confidence 345566665554443 46666677777789999999999999999963 2234457888899999999998765656555
Q ss_pred C
Q 023016 100 N 100 (288)
Q Consensus 100 n 100 (288)
+
T Consensus 209 ~ 209 (210)
T 3apq_A 209 S 209 (210)
T ss_dssp -
T ss_pred C
Confidence 4
No 150
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=95.10 E-value=0.046 Score=40.60 Aligned_cols=70 Identities=10% Similarity=0.257 Sum_probs=52.3
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+..... ++..+.+-.+-..+++..|++.+.|++++|++. .....+.|..+.+.|.+||+..
T Consensus 38 ~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 38 QKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDG-EYKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETT-EEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEECC-EEEEEEeccCCHHHHHHHHHHH
Confidence 445566666655554 477777777888999999999999999999732 2223467888999999999864
No 151
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=95.10 E-value=0.083 Score=46.38 Aligned_cols=106 Identities=16% Similarity=0.080 Sum_probs=66.0
Q ss_pred cCCCCeeecCc-cchhhhccccCCcEEEEEEccChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCC
Q 023016 91 NFLPLSVPINQ-DTLNLLKDDKRKIVLAIVEDETEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSK 168 (288)
Q Consensus 91 nslPLV~e~n~-et~~~l~~~~~~~~l~~lf~~~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~ 168 (288)
.+.|.+.+++. +.+..+......+.++-+|.+.+ ....+.|.++|..+|+ +.|+.+... .++..+|+ +
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~~~---~v~~~~~v-~--- 72 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTFST---EIAKFLKV-S--- 72 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEECCH---HHHHHHTC-C---
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEECcH---HHHHHcCC-C---
Confidence 35788888865 45554211103343333443321 2667889999999999 999998643 56777888 3
Q ss_pred CCeEEEEeCC--------ceeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 169 LPKMVVWDGN--------ENYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 169 lPai~I~d~~--------~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
.|+++++..+ ....+.+ ...++.+.|.+|++.-.-.-+
T Consensus 73 ~p~ivlfk~~~~~~kfde~~~~y~g-----~~~~~~~~l~~fi~~~~~Plv 118 (250)
T 3ec3_A 73 LGKLVLMQPEKFQSKYEPRMHVMDV-----QGSTEASAIKDYVVKHALPLV 118 (250)
T ss_dssp SSEEEEECCGGGCCTTSCSCEEEEC-----CTTSCHHHHHHHHHHHSSCTE
T ss_pred CCeEEEEecchhhccccccceeccC-----CCCCCHHHHHHHHHHcCCCce
Confidence 2899988631 1122221 025789999999999765443
No 152
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=95.10 E-value=0.045 Score=40.81 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=50.1
Q ss_pred hhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.+.|.+..+....+ ++..+.+-.+-..+++..|++...|++++|+. ......+.|..+.+.|.+||...
T Consensus 42 ~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 42 LMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVKG-EQILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEEcC-CEEEEEecCCCCHHHHHHHHHHH
Confidence 34455555544443 57777777787889999999999999999953 22223467888899999999864
No 153
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=95.07 E-value=0.043 Score=40.29 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=51.6
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. .+....+.|..+.+.|.+||+..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 35 KMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD-GQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEET-TEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeC-CeEEEEEeCCCCHHHHHHHHHHh
Confidence 344555555555544 37777777788899999999999999999973 22233467888999999999763
No 154
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=95.06 E-value=0.029 Score=41.82 Aligned_cols=70 Identities=14% Similarity=-0.029 Sum_probs=43.7
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||+..
T Consensus 34 ~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 34 DVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYN-GKEILRESRFISLENLERTIQLF 103 (105)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEEEECCC---------CCCCEEEEEET-TEEEEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEEEEEeC-CeEEEEEeCCcCHHHHHHHHHHh
Confidence 34556666665555567777777788889999999999999999973 22223457888999999999864
No 155
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.04 E-value=0.049 Score=42.48 Aligned_cols=75 Identities=9% Similarity=0.074 Sum_probs=54.3
Q ss_pred HhhcccchhHHhhhcc----eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCe
Q 023016 21 RNLLPLMSPFLIQMRK----FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLS 96 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k----~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV 96 (288)
+.+.|.+..+....+. +..+.+-.+-..+++..|++...|++++|++ ++...|.|..+.+.|.+||....-|.+
T Consensus 50 ~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 50 KQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKK--GQAVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp HTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred HHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEEC--CcEEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 4555655555444332 6666666666689999999999999999964 335567888899999999998755544
Q ss_pred e
Q 023016 97 V 97 (288)
Q Consensus 97 ~ 97 (288)
.
T Consensus 128 ~ 128 (140)
T 2dj1_A 128 T 128 (140)
T ss_dssp C
T ss_pred C
Confidence 3
No 156
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=95.02 E-value=0.044 Score=40.58 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=50.2
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||...
T Consensus 36 ~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 36 KMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEEeC-CEEEEEEecCCCHHHHHHHHHHh
Confidence 344555555544443 57777777777789999999999999999952 22223467888899999999763
No 157
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=95.02 E-value=0.27 Score=38.46 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=56.8
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCc-----------------------hhHHhhcCCCCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF-----------------------ADFADTFEANKK 166 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~-----------------------~~~le~fGL~k~ 166 (288)
+.++++.|.. .-..-......+.++++++++ +.|+.++.+.. ..+.+.||+
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v--- 104 (154)
T 3kcm_A 28 GQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT--- 104 (154)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC---
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC---
Confidence 3444444443 223456777889999999987 78888777643 225667888
Q ss_pred CCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 167 SKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 167 ~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
..+|..++.+ ++. .+.+.+ ....+.+++.++++....+.-.+
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g-----~~~~~~~~l~~~l~~l~~~~~~~ 148 (154)
T 3kcm_A 105 TGVPETFVIDRHGVILKKVVG-----AMEWDHPEVIAFLNNELSKAREG 148 (154)
T ss_dssp CSBCEEEEECTTSBEEEEEES-----CCCTTSHHHHHHHHTC-------
T ss_pred CCCCeEEEECCCCcEEEEEcC-----CCccccHHHHHHHHHHHHHhhhc
Confidence 4689888888 443 344433 22357789999998876665433
No 158
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=95.02 E-value=0.043 Score=41.44 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=52.7
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+-..+++..|++.+.|++++|+. ......+.|. +.+.|.+||+..
T Consensus 40 ~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 40 KMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKN-GKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEEEEEEC-CEEEEEEeCC-CHHHHHHHHHhh
Confidence 45667777776666677777788888899999999999999999983 2222345676 778999999864
No 159
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=94.95 E-value=0.045 Score=40.22 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=52.5
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+-..+++..|++.+.|++++|++ .+....+.|. +.+.|.+||...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 36 KMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFFKK-GQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSEEEEEET-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcEEEEEEC-CeEEEEEeCC-CHHHHHHHHHHh
Confidence 45566666666666667777788888899999999999999999964 2222346777 899999999763
No 160
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=94.93 E-value=0.075 Score=41.70 Aligned_cols=70 Identities=6% Similarity=0.174 Sum_probs=52.6
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++...|++++|.+ +++...+.|..+.+.|.+||+..
T Consensus 54 ~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-~G~~~~~~G~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 54 KMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPM-EGKPEMAQGAMPKASFKKAIDEF 124 (136)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECS-SSCCEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECC-CCcEEEEeCCCCHHHHHHHHHHH
Confidence 445565555554443 57777777777889999999999999999943 33344678889999999999876
No 161
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=94.81 E-value=0.058 Score=39.43 Aligned_cols=69 Identities=22% Similarity=0.311 Sum_probs=50.2
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+. ......+.| .+.+.|.+||+..
T Consensus 35 ~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 35 RNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKD-GKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccEEEEEeC-CcEEEEEeC-CCHHHHHHHHHhh
Confidence 34455555555555577777777787889999999999999999973 222234567 6888999999763
No 162
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=94.79 E-value=0.061 Score=41.13 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=51.6
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+-..+++..|++.+.|++++|++ ......+.|. +.+.|.+||+..
T Consensus 47 ~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 47 KMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKK-GQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp HHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEESS-SSEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccEEEEEeC-CeEEEEEcCC-CHHHHHHHHHHh
Confidence 44556666665555667777777788899999999999999999963 2222346777 899999999763
No 163
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=94.70 E-value=0.026 Score=45.79 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=49.8
Q ss_pred HhhcccchhHHhhhccee--eEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCCCee
Q 023016 21 RNLLPLMSPFLIQMRKFL--TLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSV 97 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~--~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslPLV~ 97 (288)
+.+.|.+..+.....++. .+.+-.+-..+++..|++.+.|++++||+. .....+.|..+.+.|.+||....-+...
T Consensus 52 ~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l~~~~~ 129 (142)
T 2es7_A 52 SDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDG-KLRGALSGIHPWAELLTLMRSIVDTPAA 129 (142)
T ss_dssp CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC-----CEESCCCHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhccccc
Confidence 344555554443334555 666666777889999999999999999742 2334577888899999999886444333
No 164
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=94.69 E-value=0.086 Score=38.88 Aligned_cols=69 Identities=10% Similarity=0.195 Sum_probs=49.5
Q ss_pred hhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.+.|.+..+....+ ++..+.+-.+-+.+++..|++.+.|++++|+. ......+.|..+.+.|.+||+..
T Consensus 36 ~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 36 IIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKG-GKKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESS-SSEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 34455555444433 47777777777889999999999999999963 22223467888889999999763
No 165
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=94.64 E-value=0.23 Score=42.23 Aligned_cols=73 Identities=7% Similarity=0.158 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHhc--CC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeC-CceeeccCCCCCCCCCCCHHHHHH
Q 023016 126 KSQKLVTTLKAAASAN--RE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG-NENYLTVIGSESIDEEDQGSQISR 201 (288)
Q Consensus 126 ~~e~~~~~l~~vAk~~--rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~-~~KY~~~~~~~~~~~e~t~e~I~~ 201 (288)
.-..+...+.++|+.+ .+ +.|+.+|.+.++++.+.||+ ...|++.++++ .....+.+ .-+.+++.+
T Consensus 39 ~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v---~~~Ptl~~~~~~~~~~~~~G-------~~~~~~l~~ 108 (229)
T 2ywm_A 39 TAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGV---DRVPTIVIEGDKDYGIRYIG-------LPAGLEFTT 108 (229)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTC---CBSSEEEEESSSCCCEEEES-------CCCTTHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCC---CcCcEEEEECCCcccceecC-------CccHHHHHH
Confidence 4567888888888887 66 99999999999999999999 47899999973 22233333 346788999
Q ss_pred HHHHHhc
Q 023016 202 FLEGYRE 208 (288)
Q Consensus 202 Fl~~fl~ 208 (288)
|+.....
T Consensus 109 ~~~~~~~ 115 (229)
T 2ywm_A 109 LINGIFH 115 (229)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998764
No 166
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=94.64 E-value=0.34 Score=37.13 Aligned_cols=83 Identities=8% Similarity=0.076 Sum_probs=56.1
Q ss_pred CCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcC-------------------------chhHHhhcCC
Q 023016 112 RKIVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-------------------------FADFADTFEA 163 (288)
Q Consensus 112 ~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~-------------------------~~~~le~fGL 163 (288)
.+.++++.|.. .-..-......+.++++++++ +.|+.++.+. ...+.+.||+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 44455555543 223456778889999999983 8888887642 3456788888
Q ss_pred CCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHH
Q 023016 164 NKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLE 204 (288)
Q Consensus 164 ~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~ 204 (288)
..+|++++.| ++. .+.+.+ ..+.+++.++++
T Consensus 113 ---~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~ 145 (145)
T 3erw_A 113 ---ITIPTSFLLNEKGEIEKTKIG-------PMTAEQLKEWTE 145 (145)
T ss_dssp ---CEESEEEEECTTCCEEEEEES-------CCCHHHHHHHHC
T ss_pred ---CccCeEEEEcCCCcEEEEEcC-------CcCHHHHHHhhC
Confidence 4689999998 443 344433 478899988863
No 167
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=94.60 E-value=0.064 Score=40.50 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=48.3
Q ss_pred cccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcC
Q 023016 24 LPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 24 ~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ns 92 (288)
.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|++ ......+.|..+.+.|.++|....
T Consensus 38 ~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 38 EKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRD-GKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp HHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES-SSEEEEEESCCCHHHHHHHHHTC-
T ss_pred HHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC-CEEEEEEcCCCCHHHHHHHHHHHh
Confidence 44444444443456666666677789999999999999999963 222334678889999999998764
No 168
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=94.49 E-value=0.075 Score=42.72 Aligned_cols=68 Identities=9% Similarity=0.136 Sum_probs=51.0
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcc-cccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHN-IFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~-~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+ +++.. .+.| .+.+.|.+||...
T Consensus 48 ~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~--~G~~~~~~~G-~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 48 AQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFK--NSQKIDRLDG-AHAPELTKKVQRH 116 (153)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCCCEEEEEE--CCEEEEEEeC-CCHHHHHHHHHHH
Confidence 4455666665555567777877778788999999999999999998 33332 3456 5778899999886
No 169
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=94.45 E-value=0.058 Score=40.32 Aligned_cols=58 Identities=9% Similarity=0.086 Sum_probs=43.9
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc--ccccCCCCHHHHHHHHHHcCCC
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH--NIFYGPFDEEFLEEFIKQNFLP 94 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~--~~f~g~f~~~~L~~FI~~nslP 94 (288)
++..+.+-.+-..+++..|++.+.|++++|++. ... ..+.|..+.+.|.+||+...-|
T Consensus 59 ~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 59 EIRLAKVDATEESDLAQQYGVRGYPTIKFFRNG-DTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp CCBCEEEETTTCCSSHHHHTCCSSSEEEEEESS-CSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred cEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCC-CcCCcccccCccCHHHHHHHHHhccCC
Confidence 455555555556789999999999999999742 222 4678888999999999987544
No 170
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=94.45 E-value=0.078 Score=40.53 Aligned_cols=70 Identities=24% Similarity=0.343 Sum_probs=50.8
Q ss_pred HhhcccchhHHhhh-cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQM-RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~-~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.... .++..+.+-.+-..+++..|++...|++++|+. ......+.|..+.+.|.+||+..
T Consensus 47 ~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 47 KILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKN-GDVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp HHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEEEeC-CcEEEEEcCCCCHHHHHHHHHHH
Confidence 44556555555443 357777777777889999999999999999962 22223467888899999999753
No 171
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=94.44 E-value=0.079 Score=42.03 Aligned_cols=69 Identities=6% Similarity=0.169 Sum_probs=51.8
Q ss_pred hhcccchhHHhhh-cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQM-RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~~-~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.+.|.+..+.... .++..+.+-.+-..+++..|++.+.|++++|++ ......+.|..+.+.|.+||+..
T Consensus 72 ~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 72 SFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLYRN-GKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEEEC-CeEEEEEeCCCCHHHHHHHHHHH
Confidence 4455555555444 457777777888899999999999999999973 22223478888999999999864
No 172
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=94.40 E-value=0.067 Score=43.49 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=51.5
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+..... ++..+.+-.+-..+++..|++...|++++|+. ......+.|..+.+.|.+||...
T Consensus 80 ~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 80 RQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHK-GRELARAAGARPASELVGFVRGK 150 (155)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEEeC-CeEEEEecCCCCHHHHHHHHHHH
Confidence 344555555555443 67777777777889999999999999999963 22223467888999999999874
No 173
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=94.37 E-value=0.46 Score=36.57 Aligned_cols=84 Identities=11% Similarity=0.067 Sum_probs=54.4
Q ss_pred CcEEEEEEccC-hhhHHHHHHHHHHHHHhc-CC--cEEEEEeCcC-------------------------chhHHhhcCC
Q 023016 113 KIVLAIVEDET-EEKSQKLVTTLKAAASAN-RE--LVFCYVGIKQ-------------------------FADFADTFEA 163 (288)
Q Consensus 113 ~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~-rg--l~Fv~VD~~~-------------------------~~~~le~fGL 163 (288)
+.++++.|..+ -..-......+.++++++ ++ +.|+.++.+. ...+.+.||+
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCC
Confidence 34444444421 122456677888899998 55 7888776653 3356788888
Q ss_pred CCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 164 NKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 164 ~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
..+|++++.+ ++. .+. . .+.+++.++++..++.
T Consensus 113 ---~~~P~~~lid~~G~i~~~--~--------~~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 113 ---LTLPTNILLSPTGKILAR--D--------IQGEALTGKLKELLKT 147 (148)
T ss_dssp ---CSSSEEEEECTTSBEEEE--S--------CCHHHHHHHHHHHC--
T ss_pred ---CCcCEEEEECCCCeEEEe--c--------CCHHHHHHHHHHHHcc
Confidence 4789999998 443 232 1 2788999999987653
No 174
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=94.34 E-value=0.075 Score=39.99 Aligned_cols=69 Identities=10% Similarity=0.208 Sum_probs=51.0
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+-..+++..|++...|++++|+. ......+.|. +.+.|.+||...
T Consensus 42 ~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 42 KRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFKVYKN-GSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEEET-TEEEEEEESC-CHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccEEEEEEC-CcEEEEEeCC-CHHHHHHHHHHh
Confidence 44556666665555567777777777789999999999999999973 2222346777 899999999763
No 175
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=94.32 E-value=0.087 Score=41.36 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=51.0
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+..... ++..+.+-.+-..+++..|++.+.|++++|++ ......+.|..+.+.|.+||...
T Consensus 66 ~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 66 RLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRR-GAPVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeC-CcEEEEEeCCCCHHHHHHHHHHH
Confidence 344555555544444 57777777777889999999999999999973 22223467888899999999864
No 176
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=94.21 E-value=0.11 Score=38.09 Aligned_cols=68 Identities=25% Similarity=0.355 Sum_probs=49.2
Q ss_pred hhcccchhHHhhh-cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQM-RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~~-~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.+.|.+..+.... .++..+.+-.+-..+++..|++.+.|++++|++. .....+.| .+.+.|.+||+..
T Consensus 37 ~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 37 MISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNG-VKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETT-EEEEEEES-CCHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCC-cEEEEEcC-CCHHHHHHHHHHh
Confidence 3445555544444 5677777878888899999999999999999732 22234567 6888899999764
No 177
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=94.19 E-value=0.08 Score=39.40 Aligned_cols=69 Identities=12% Similarity=0.201 Sum_probs=50.2
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+..... ++..+.+-.+-..+++..|++.+.|++++|+.. .....+.|. +.+.|.+||...
T Consensus 40 ~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 40 KMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDG-VKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEEETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEEECC-eEEEEEcCC-CHHHHHHHHHHH
Confidence 344555555555444 677777777878899999999999999999731 222346777 888999999864
No 178
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=94.13 E-value=0.086 Score=39.30 Aligned_cols=70 Identities=14% Similarity=0.146 Sum_probs=50.3
Q ss_pred HhhcccchhHHhhh-cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQM-RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~-~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.... .++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||...
T Consensus 39 ~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 39 RQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQG-GEVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHTHHH
T ss_pred HhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEEeC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 34455555554444 357777777787899999999999999999963 22223467888889999998753
No 179
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=94.13 E-value=0.55 Score=37.36 Aligned_cols=87 Identities=11% Similarity=0.118 Sum_probs=54.3
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCc------------------Cc-------------------
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIK------------------QF------------------- 154 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~------------------~~------------------- 154 (288)
+.++++.|.. .-..-......+.+++++++++.|+.++.+ ..
T Consensus 37 gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (165)
T 3ha9_A 37 GDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMV 116 (165)
T ss_dssp SSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEE
T ss_pred CCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEE
Confidence 3444444433 223345677889999999988777777654 11
Q ss_pred ---hhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCC-CHHHHHHHHHHHhcC
Q 023016 155 ---ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEED-QGSQISRFLEGYREG 209 (288)
Q Consensus 155 ---~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~-t~e~I~~Fl~~fl~G 209 (288)
..+.+.||+ ..+|.+++.|.+.+....+ .. +.+++.++++..+.|
T Consensus 117 ~d~~~~~~~~~v---~~~P~~~lid~~G~i~~~g-------~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 117 MDDGSLVEKFNV---RSIDYIVIMDKSSNVLYAG-------TTPSLGELESVIKSVQGG 165 (165)
T ss_dssp ECCSHHHHHTTC---CSSSEEEEEETTCCEEEEE-------ESCCHHHHHHHHHHC---
T ss_pred eChHHHHHHhCC---CCceEEEEEcCCCcEEEeC-------CCCCHHHHHHHHHHHhcC
Confidence 145566777 4689999998332222222 35 899999999988765
No 180
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=94.12 E-value=0.061 Score=42.51 Aligned_cols=70 Identities=9% Similarity=0.018 Sum_probs=52.7
Q ss_pred HhhcccchhHHhhhcc-eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....+ +..+.+-.+-..+++..|++.+.|++++|++ ......+.|..+.+.|.+||...
T Consensus 40 ~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 40 KAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFFCH-GRPVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEEET-TEEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEEeC-CcEEEEEcCCCCHHHHHHHHHHH
Confidence 4556666666555544 7777777788899999999999999999973 22223577888899999999875
No 181
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=94.11 E-value=0.078 Score=40.28 Aligned_cols=70 Identities=11% Similarity=0.055 Sum_probs=50.4
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCC----CCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP----FDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~----f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|++.. ....+.|. .+.+.|.+||...
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~-~~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 37 QNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYER-AKKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEG-GGTEEEEEEECCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCC-ccceeeccccCcCCHHHHHHHHHHH
Confidence 344555555544443 6777777777788999999999999999997532 23335553 7899999999874
No 182
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=94.09 E-value=0.082 Score=46.98 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=39.6
Q ss_pred cHHHHhHcCCC--CCCeEEEEccCC-CCcccccCCCCHHHHHHHHHHcC
Q 023016 47 SEDTMVLYDFD--KVPALVALQPSY-NEHNIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 47 seel~~~y~~~--~~PsIvlfk~~d-ee~~~f~g~f~~~~L~~FI~~ns 92 (288)
..+++..|++. +.|++++|++.. .....|.|..+.+.|.+||..+.
T Consensus 70 ~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 70 NMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp SHHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred hHHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 68899999999 999999999643 23557889999999999999986
No 183
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=94.02 E-value=0.057 Score=42.26 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=50.7
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++...|++++|+. ......+.|..+.+.|.+||+..
T Consensus 56 ~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 56 KMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp HHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEeC-CEEEEEEcCCCCHHHHHHHHHHh
Confidence 445566655554443 57777777777788999999999999999952 22223467888899999999763
No 184
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=94.01 E-value=0.075 Score=39.07 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=49.0
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+..... ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||...
T Consensus 33 ~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 33 RMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKG-GRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp HHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeC-CeEEEEEecCCCHHHHHHHHHHH
Confidence 344455555444433 36667777777789999999999999999953 22233467888888999998753
No 185
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=93.92 E-value=1.2 Score=33.33 Aligned_cols=84 Identities=10% Similarity=-0.066 Sum_probs=54.9
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCc----------------------------CchhHHhhcC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIK----------------------------QFADFADTFE 162 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~----------------------------~~~~~le~fG 162 (288)
+.++++.|.. .-..-......+.++++++++ +.|+.++.. ....+.+.||
T Consensus 22 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (138)
T 4evm_A 22 GKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYG 101 (138)
T ss_dssp TSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTT
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcC
Confidence 3455555543 223456777888999998876 888888421 1224567778
Q ss_pred CCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 163 ANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 163 L~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
+ ..+|++++.| ++. .+...+ ..+.+++.++++..
T Consensus 102 v---~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~l 137 (138)
T 4evm_A 102 V---RSYPTQAFIDKEGKLVKTHPG-------FMEKDAILQTLKEL 137 (138)
T ss_dssp C---CSSSEEEEECTTCCEEEEEES-------CCCHHHHHHHHHHC
T ss_pred c---ccCCeEEEECCCCcEEEeecC-------CCcHHHHHHHHHhh
Confidence 7 4689999998 443 344433 46889999988763
No 186
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=93.80 E-value=0.11 Score=40.62 Aligned_cols=69 Identities=7% Similarity=0.076 Sum_probs=50.5
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++...|++++|+.. .....+.| .+.+.|.+||...
T Consensus 53 ~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G-~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 53 KTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSG-KMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp HHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEEEEEeCC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 445566665555555677777777888999999999999999999632 22234667 6888999999763
No 187
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=93.77 E-value=0.3 Score=38.85 Aligned_cols=66 Identities=12% Similarity=0.080 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeC-Cce-eeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 130 LVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG-NEN-YLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 130 ~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~-~~K-Y~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
..+.|.++|+.+.++.|+.++.. .+++.+|+ + .|+++++.. +++ -.+++ + ....++.+.|.+|++.
T Consensus 54 ~~~~F~~~A~~~~d~~F~~t~~~---~v~~~~~v-~---~~~vvlfkkfde~~~~~~g-~--~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 54 AVPILHSMVQKFPGVSFGISTDS---EVLTHYNI-T---GNTICLFRLVDNEQLNLED-E--DIESIDATKLSRFIEI 121 (124)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCH---HHHHHTTC-C---SSCEEEEETTTTEEEEECH-H--HHTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCceEEEEChH---HHHHHcCC-C---CCeEEEEEcCCCCceeecC-c--ccCCCCHHHHHHHHHH
Confidence 36789999999933999999764 67888898 3 688999983 333 22321 0 0014799999999986
No 188
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=93.67 E-value=0.038 Score=43.05 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=42.7
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||+..
T Consensus 67 ~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 67 KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp -CEEEEEETTSCTTTGGGGTCCBSSEEEEEES-SSEEEEEESCCCHHHHHHHHTTT
T ss_pred CeEEEEEECCCCHHHHHHcCCCccCEEEEEEC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 46666677777789999999999999999953 22233478888999999999764
No 189
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=93.67 E-value=0.13 Score=38.15 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=48.6
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+.. .....+.| ...+.|.+||+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G-~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 37 LRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQFFRNK-VRIDQYQG-ADAVGLEEKIKQH 105 (107)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEEEEEECC-eEEEEEeC-CCHHHHHHHHHHh
Confidence 445565555555545677777777778899999999999999999732 22234567 4556699999764
No 190
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=93.66 E-value=0.54 Score=37.69 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=49.6
Q ss_pred HHHHHHH---HHHHHhcCC-cEEEEEeCcCch-----------hHHhhcCCCCCCCCCeEEEEe-CC-ceeeccCCCCCC
Q 023016 128 QKLVTTL---KAAASANRE-LVFCYVGIKQFA-----------DFADTFEANKKSKLPKMVVWD-GN-ENYLTVIGSESI 190 (288)
Q Consensus 128 e~~~~~l---~~vAk~~rg-l~Fv~VD~~~~~-----------~~le~fGL~k~~~lPai~I~d-~~-~KY~~~~~~~~~ 190 (288)
......+ .++++.+.. +.++.+|.+... .+.+.||+ ..+|++++.+ ++ ..+.. +
T Consensus 64 ~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v---~~~Pt~~~~d~~G~~~~~~-G----- 134 (154)
T 2ju5_A 64 IKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKV---TGFPELVFIDAEGKQLARM-G----- 134 (154)
T ss_dssp HHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTC---CSSSEEEEECTTCCEEEEE-C-----
T ss_pred HHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCC---CCCCEEEEEcCCCCEEEEe-c-----
Confidence 3444445 556555534 999999987542 66788999 4699999997 44 34444 3
Q ss_pred CCCCCHHHHHHHHHHHhcC
Q 023016 191 DEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 191 ~~e~t~e~I~~Fl~~fl~G 209 (288)
....+.+++.++++..++.
T Consensus 135 ~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 135 FEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp CCTTCHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHhc
Confidence 1123789999999988764
No 191
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=93.63 E-value=1 Score=35.24 Aligned_cols=86 Identities=7% Similarity=-0.033 Sum_probs=56.3
Q ss_pred cEEEEEEcc-ChhhHHH-HHHHHHHHHHhcCC--cEEEEEeCc----------------------------Cchh-----
Q 023016 114 IVLAIVEDE-TEEKSQK-LVTTLKAAASANRE--LVFCYVGIK----------------------------QFAD----- 156 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~-~~~~l~~vAk~~rg--l~Fv~VD~~----------------------------~~~~----- 156 (288)
.++++.|.. .-..-.. ....+.+++++|++ +.|+.++.+ ....
T Consensus 31 k~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 110 (160)
T 3lor_A 31 KVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRIP 110 (160)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSC
T ss_pred CEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchhh
Confidence 344444433 2233344 57888999999986 788777641 1112
Q ss_pred -HHhhcCCCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 157 -FADTFEANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 157 -~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+.+.||+ ..+|.+++.+ ++. .+.+.+ ..+.+.+.++++..++.
T Consensus 111 ~~~~~~~v---~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 111 STMKKYRL---EGTPSIILADRKGRIRQVQFG-------QVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp HHHHHTTC---CSSSEEEEECTTSBEEEEEES-------CCCHHHHHHHHHHHHTC
T ss_pred hHHHhccc---CccceEEEECCCCcEEEEecC-------cCCHHHHHHHHHHHHhc
Confidence 5677777 4689999998 443 444433 46899999999998865
No 192
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=93.58 E-value=0.13 Score=38.95 Aligned_cols=69 Identities=12% Similarity=0.181 Sum_probs=49.8
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+-..+++..|++.+.|++++|+. ......+.|.. .+.|.+||+..
T Consensus 50 ~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 50 RIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKE-GDVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESSC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeC-CEEEEEEeCcC-HHHHHHHHHHH
Confidence 44556566555555556667677777789999999999999999973 22223467776 88999999864
No 193
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=93.58 E-value=0.14 Score=37.42 Aligned_cols=68 Identities=12% Similarity=0.216 Sum_probs=48.7
Q ss_pred hhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 22 NLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 22 ~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 35 LIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN-GERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC-CeEEEEEecCCCHHHHHHHHHh
Confidence 44455555444443 46777777777889999999999999999963 1222346788888999999975
No 194
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=93.45 E-value=0.23 Score=38.83 Aligned_cols=63 Identities=8% Similarity=0.111 Sum_probs=45.7
Q ss_pred hhHHhhhcceeeEeeec----cccHHHHhHcCCCCCCeEEEEccCCCCc---ccccCCCCHHHHHHHHHHc
Q 023016 28 SPFLIQMRKFLTLLKML----DFSEDTMVLYDFDKVPALVALQPSYNEH---NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 28 ~~~~~~~~k~~~v~~~~----~~seel~~~y~~~~~PsIvlfk~~dee~---~~f~g~f~~~~L~~FI~~n 91 (288)
..+....+++..+++-. +-..+++..|++.+.|++++|.+. ++. ..+.|..+.+.|.+||+..
T Consensus 57 ~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~-G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 57 PQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQ-GQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp HHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTT-SCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred HHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCC-CCEeeeeeeeeccCHHHHHHHHHhc
Confidence 34443444577776666 445789999999999999999432 333 3578888999999999864
No 195
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=93.40 E-value=0.1 Score=39.36 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=50.5
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||...
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 46 KMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKD-GQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEEC-CEEEEEecCCCCHHHHHHHHHHH
Confidence 344555555544442 57777777777889999999999999999973 22223467888889999999764
No 196
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=93.39 E-value=0.12 Score=42.26 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=43.6
Q ss_pred cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 35 RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 35 ~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.++..+-+-.|-..++..+|++.+.||+++||+. +......|-...+.|.+||...
T Consensus 66 ~~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG-~~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 66 GRLVAAEVAAEAERGLMARFGVAVCPSLAVVQPE-RTLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp TTEEEEEECGGGHHHHHHHHTCCSSSEEEEEECC-EEEEEEESCCCHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHcCCccCCEEEEEECC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 3566666677888999999999999999999942 2223356777888999999865
No 197
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=93.37 E-value=0.19 Score=37.48 Aligned_cols=67 Identities=12% Similarity=0.157 Sum_probs=47.8
Q ss_pred hhcccchhHHhh--hcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQ--MRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~--~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~n 91 (288)
.+.|.+..+... ..++..+.+-.+-..+++..|++.+.|++++|+. ++. ..+.|. ..+.|.+||...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 38 ALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIHK--GTILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp HHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET--TEEEEEECSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEEC--CEEEEEecCC-CHHHHHHHHHHH
Confidence 345555555544 4567777777788899999999999999999963 332 235665 555699998764
No 198
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=93.32 E-value=0.21 Score=42.55 Aligned_cols=81 Identities=10% Similarity=0.086 Sum_probs=55.6
Q ss_pred hhHHHHHHhhcccchhHHhhh------cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-----------ccc-
Q 023016 14 NCLSVILRNLLPLMSPFLIQM------RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-----------NIF- 75 (288)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~------~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-----------~~f- 75 (288)
.|- ..|.+-|.+...-... .++...-+-.+-..++.+.|++.+.|+|++|++..... ..|
T Consensus 55 wCg--pCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~ 132 (178)
T 3ga4_A 55 SCQ--LCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYS 132 (178)
T ss_dssp BCH--HHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEEC
T ss_pred CCh--hHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceee
Confidence 564 3566667666655443 35555555666679999999999999999999754222 223
Q ss_pred --cC-CCCHHHHHHHHHHcCCCCe
Q 023016 76 --YG-PFDEEFLEEFIKQNFLPLS 96 (288)
Q Consensus 76 --~g-~f~~~~L~~FI~~nslPLV 96 (288)
.| .++.+.|.+||....-+.+
T Consensus 133 ~~~~~~~~ae~la~fi~~~t~~~i 156 (178)
T 3ga4_A 133 LVPENAENTLQFGDFLAKILNISI 156 (178)
T ss_dssp CCGGGTTCHHHHHHHHHHHHTCCC
T ss_pred cccCCCcCHHHHHHHHHHhcCCCc
Confidence 24 6789999999988644333
No 199
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=93.30 E-value=0.16 Score=39.26 Aligned_cols=68 Identities=15% Similarity=0.222 Sum_probs=50.2
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+. ++. ..+.| .+.+.|.+||...
T Consensus 54 ~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~--G~~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 54 RFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKE--GKILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCSSSEEEEEET--TEEEEEEES-CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCccCEEEEEEC--CEEEEEEeC-CCHHHHHHHHHHh
Confidence 34556666655555577778787787889999999999999999963 222 23566 5888999999763
No 200
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=93.22 E-value=0.25 Score=39.07 Aligned_cols=82 Identities=12% Similarity=0.067 Sum_probs=57.9
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcCchh----HHhhcCCCCCCCCCeEEEEeCC-ceeeccCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRELVFCYVGIKQFAD----FADTFEANKKSKLPKMVVWDGN-ENYLTVIG 186 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~----~le~fGL~k~~~lPai~I~d~~-~KY~~~~~ 186 (288)
..++++++.. .=.-.......|++.+.. .++.|+.+|.+++.. +++.||+ + .+.|.++++.++ ..|....
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V-~-h~sPq~il~k~G~~v~~~SH- 99 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNV-K-HESPQAFYFVNGEMVWNRDH- 99 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTC-C-CCSSEEEEEETTEEEEEEEG-
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCC-c-cCCCeEEEEECCEEEEEeec-
Confidence 4455555543 223456778888888875 449999999998855 7899999 3 468999998854 4665443
Q ss_pred CCCCCCCCCHHHHHHHH
Q 023016 187 SESIDEEDQGSQISRFL 203 (288)
Q Consensus 187 ~~~~~~e~t~e~I~~Fl 203 (288)
..++.++|.+++
T Consensus 100 -----~~I~~~~l~~~~ 111 (112)
T 3iv4_A 100 -----GDINVSSLAQAE 111 (112)
T ss_dssp -----GGCSHHHHHHHT
T ss_pred -----cccCHHHHHHhh
Confidence 258899888765
No 201
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=93.20 E-value=0.19 Score=44.88 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=38.7
Q ss_pred cHHHHhHcCCC--CCCeEEEEccCC-CCcccc--cCCCCHHHHHHHHHHcCC
Q 023016 47 SEDTMVLYDFD--KVPALVALQPSY-NEHNIF--YGPFDEEFLEEFIKQNFL 93 (288)
Q Consensus 47 seel~~~y~~~--~~PsIvlfk~~d-ee~~~f--~g~f~~~~L~~FI~~nsl 93 (288)
..+++..|++. +.|++++|+ .. .....| .|..+.+.|.+||..+.-
T Consensus 82 n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 82 NKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp THHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred cHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 67899999999 999999998 43 234567 899999999999998853
No 202
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=93.20 E-value=0.18 Score=39.71 Aligned_cols=70 Identities=13% Similarity=0.038 Sum_probs=46.0
Q ss_pred hhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCC--CCeEEEEccCCCCccccc--CCCCHHHHHHHHHHc
Q 023016 22 NLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDK--VPALVALQPSYNEHNIFY--GPFDEEFLEEFIKQN 91 (288)
Q Consensus 22 ~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~--~PsIvlfk~~dee~~~f~--g~f~~~~L~~FI~~n 91 (288)
.+.|.+...--..+ ++..+-+-.+-..++++.|++.+ .|++++|+..+++...+. |.++.+.|.+||+..
T Consensus 39 ~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 39 ELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDF 113 (133)
T ss_dssp HHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHH
Confidence 34444444433333 44444444455567899999998 999999995233333444 889999999999864
No 203
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=92.99 E-value=0.15 Score=38.79 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=48.8
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++...|++++|+. ......+.|.. .+.|.+||+.
T Consensus 46 ~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 46 KMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKD-GQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSEEEEEET-TEEEEEEESSC-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccEEEEEeC-CeEEEEEeCCC-HHHHHHHHHh
Confidence 44556666655555556677777777789999999999999999963 22223467766 8899999874
No 204
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=92.96 E-value=0.14 Score=39.29 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=41.7
Q ss_pred eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 37 FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 37 ~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+..+.+-.+-..+++..|++...|++++|++ ......+.|. +.+.|.+||...
T Consensus 67 v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 67 VGFYKVDVDEQSQIAQEVGIRAMPTFVFFKN-GQKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTTCHHHHHHHTCCSSSEEEEEET-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEEECcCCHHHHHHcCCCcccEEEEEEC-CeEEeeEcCC-CHHHHHHHHHHh
Confidence 7777777777889999999999999999973 2222346777 889999999864
No 205
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=92.86 E-value=0.33 Score=40.41 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=52.2
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeC-Cce-eeccCCCCCCCCCCCHHHHHHH
Q 023016 125 EKSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDG-NEN-YLTVIGSESIDEEDQGSQISRF 202 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~-~~K-Y~~~~~~~~~~~e~t~e~I~~F 202 (288)
..-......+.++|+.++++.|+.+|.++++..++.|+-.....+|++++.++ +.. ..+.+ ...-..+.|.++
T Consensus 67 ~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~g~-----~p~~~~~~i~~~ 141 (167)
T 1z6n_A 67 PDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRFVE-----RPQAVLDGGPQA 141 (167)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEEES-----SCHHHHHHCHHH
T ss_pred hhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEEcC-----CCHHHHHhHHHH
Confidence 34567788899999998779999999887777777675211257999999983 331 11211 111122445566
Q ss_pred HHHHhcCcc
Q 023016 203 LEGYREGRT 211 (288)
Q Consensus 203 l~~fl~Gkl 211 (288)
..+|.+|.-
T Consensus 142 ~~~~~~~~~ 150 (167)
T 1z6n_A 142 LAAYKAGDY 150 (167)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHcccc
Confidence 666766653
No 206
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=92.84 E-value=1.4 Score=34.55 Aligned_cols=88 Identities=8% Similarity=-0.028 Sum_probs=57.0
Q ss_pred CcEEEEEEcc-ChhhHHH-HHHHHHHHHHhcCC--cEEEEEeCc----------------------------Cch-----
Q 023016 113 KIVLAIVEDE-TEEKSQK-LVTTLKAAASANRE--LVFCYVGIK----------------------------QFA----- 155 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~-~~~~l~~vAk~~rg--l~Fv~VD~~----------------------------~~~----- 155 (288)
+.++++.|.. .-..-.. ....+.+++++|++ +.|+.++.+ ...
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 3344444433 2223445 37889999999985 778777642 011
Q ss_pred hHHhhcCCCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 156 DFADTFEANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 156 ~~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
.+++.||+ ..+|++++.+ ++. .+.+.+ ..+.+.+.++++..++.+
T Consensus 108 ~~~~~~~v---~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 108 RTMAAYQM---RGTPSLLLIDKAGDLRAHHFG-------DVSELLLGAEIATLLGEA 154 (158)
T ss_dssp HHHHHTTC---CSSSEEEEECTTSEEEEEEES-------CCCHHHHHHHHHHHHTSC
T ss_pred HHHHHcCC---CCCCEEEEECCCCCEEEEEeC-------CCCHHHHHHHHHHHhccC
Confidence 35677787 4689999998 443 444433 468999999999988754
No 207
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=92.81 E-value=0.026 Score=48.47 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=37.7
Q ss_pred hhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccccccCCC
Q 023016 155 ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQKKVAGPS 220 (288)
Q Consensus 155 ~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~iKSeP~ 220 (288)
.+.++.+|+ ...|+++| +.||.... .+++.+++.+|+++|++ +.++++|+|.
T Consensus 40 ~~~a~~~gi---~gvP~fvi---ngk~~~~~------~~~~~~~~~~f~~~~~~--l~~~L~s~~~ 91 (197)
T 1un2_A 40 EKAAADVQL---RGVPAMFV---NGKYQLNP------QGMDTSNMDVFVQQYAD--TVKYLSEKKG 91 (197)
T ss_dssp HHHHHHTTC---CSSSEEEE---TTTEEECG------GGSCCSSHHHHHHHHHH--HHHHHTC---
T ss_pred HHHHHHcCC---CcCCEEEE---cceEecCc------cccccccHHHHHHHHHH--HHHHHHhCcc
Confidence 345788899 35899987 44676542 24677889999999999 8999999864
No 208
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=92.78 E-value=0.15 Score=35.90 Aligned_cols=51 Identities=22% Similarity=0.170 Sum_probs=39.9
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
++..+.+-.+-+.+++..|++.+.|++++ +++. .+.|..+.+.|.+||+..
T Consensus 33 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~----~G~~-~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 33 KIDVEKIDIMVDREKAIEYGLMAVPAIAI----NGVV-RFVGAPSREELFEAINDE 83 (85)
T ss_dssp SCCEEEECTTTCGGGGGGTCSSCSSEEEE----TTTE-EEECSSCCHHHHHHHHHH
T ss_pred CeEEEEEECCCCHHHHHhCCceeeCEEEE----CCEE-EEccCCCHHHHHHHHHHH
Confidence 56666666677788999999999999988 2333 577877888999999864
No 209
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=92.78 E-value=0.098 Score=42.99 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=48.7
Q ss_pred hcccchhHHhhh-cc-eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 23 LLPLMSPFLIQM-RK-FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 23 ~~~~~~~~~~~~-~k-~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+-|.+.++--.. .+ +..+-+-.|-+.++...|++.+.||+++||+.. ......|-...+.|.+||+..
T Consensus 54 iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~-~v~~~~G~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 54 NPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGN-YRGVLNGIHPWAELINLMRGL 123 (140)
T ss_dssp HHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred HHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCE-EEEEEecCCCHHHHHHHHHHH
Confidence 334444444443 24 666667778889999999999999999999522 223356777888999999865
No 210
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=92.64 E-value=0.21 Score=37.29 Aligned_cols=68 Identities=15% Similarity=0.234 Sum_probs=49.2
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+-..+++..|++.+.|++++|+. ++. ..+.| .+.+.|.+||...
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~--g~~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 44 RVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAMPTFLFIKD--GEKVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSBSEEEEEET--TEEEEEEES-CCHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcCcEEEEEeC--CeEEEEecC-CCHHHHHHHHHHH
Confidence 34455555555555567777777777889999999999999999973 232 23566 5888999999874
No 211
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=92.62 E-value=2.1 Score=33.78 Aligned_cols=69 Identities=10% Similarity=0.078 Sum_probs=47.1
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcC-------------------chhHHhhcCCCCCCCCCe
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQ-------------------FADFADTFEANKKSKLPK 171 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~-------------------~~~~le~fGL~k~~~lPa 171 (288)
.++++.|.. .-..-......+.++++++++ +.|+.++.+. ...+.+.||+ ..+|.
T Consensus 42 k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~ 118 (158)
T 3hdc_A 42 KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGA---NRLPD 118 (158)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTC---CSSSE
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCC---CCcce
Confidence 344444443 223456778889999999984 8888888765 3466788888 47899
Q ss_pred EEEEe-CCc-eeeccC
Q 023016 172 MVVWD-GNE-NYLTVI 185 (288)
Q Consensus 172 i~I~d-~~~-KY~~~~ 185 (288)
+++.+ ++. .+.+.+
T Consensus 119 ~~lid~~G~i~~~~~G 134 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTG 134 (158)
T ss_dssp EEEECTTSBEEEEEES
T ss_pred EEEEcCCCCEEEEEeC
Confidence 88888 443 444444
No 212
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=92.60 E-value=0.15 Score=39.78 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=50.8
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+. ......+.|. +.+.|.+||...
T Consensus 62 ~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 62 RQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRD-GQQVDKLVGA-NKPELHKKITAI 130 (139)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESEEEEEET-TEEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccEEEEEcC-CeEEEEEeCC-CHHHHHHHHHHH
Confidence 44556666655555567788888888899999999999999999963 2222335676 788999999875
No 213
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=92.57 E-value=1.8 Score=35.08 Aligned_cols=89 Identities=10% Similarity=0.050 Sum_probs=54.0
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--c------EEEEEeCcC-ch----hHHhhcCCC--------------
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE--L------VFCYVGIKQ-FA----DFADTFEAN-------------- 164 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l------~Fv~VD~~~-~~----~~le~fGL~-------------- 164 (288)
+.++++.|.. .-..-......|++++++|++ + .|+.|+.+. .. ++++.++++
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 138 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAAS 138 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHH
Confidence 3444444443 223345667778888888765 7 999998775 33 233333330
Q ss_pred ----CCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 165 ----KKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 165 ----k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
.-..+|..++.+ ++. .+.+.+ ..+.++|.++++..++
T Consensus 139 ~~~~~v~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 139 LGGVPASVIPTTIVLDKQHRPAAVFLR-------EVTSKDVLDVALPLVD 181 (183)
T ss_dssp TTTCCTTCCSEEEEECTTSCEEEEECS-------CCCHHHHHHHHHHHHH
T ss_pred hccCCCCCCCeEEEECCCCcEEEEEcC-------CCCHHHHHHHHHHHHh
Confidence 114589888888 443 444433 4689999999998775
No 214
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=92.43 E-value=0.27 Score=36.62 Aligned_cols=67 Identities=15% Similarity=0.110 Sum_probs=47.3
Q ss_pred HhhcccchhHHhhhcceeeEeeecc-ccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLD-FSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~-~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~ 90 (288)
+.+.|.+..+....+++..+.+-.+ -..+++..|++.+.|++++|+. ++. ..+.|. ..+.|.+||..
T Consensus 40 ~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~~G~-~~~~l~~~l~~ 108 (111)
T 2pu9_C 40 KAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKE--NSVVGEVTGA-KYDKLLEAIQA 108 (111)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBSSEEEEESS--SSEEEEEESS-CHHHHHHHHHH
T ss_pred HHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCeeeEEEEEeC--CcEEEEEcCC-CHHHHHHHHHH
Confidence 4455666665555556666766665 5688999999999999999973 232 235665 58889999975
No 215
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=92.41 E-value=0.22 Score=37.53 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=47.3
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.... ++..+.+-.+-..+++..|++.+.|++++|+.. .....+.| .+.+.|.+||+..
T Consensus 49 ~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 49 KTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISAMPTFIAIKNG-EKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp HHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCSSSEEEEEETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCccceEEEEeCC-cEEEEEeC-CCHHHHHHHHHHh
Confidence 33445554443333 667777777777899999999999999999732 22233567 5888999999763
No 216
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=92.38 E-value=0.41 Score=33.00 Aligned_cols=61 Identities=20% Similarity=0.147 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHhcCC-cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCC-CHHHHHHHH
Q 023016 127 SQKLVTTLKAAASANRE-LVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEED-QGSQISRFL 203 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~-t~e~I~~Fl 203 (288)
-......++++++++.+ +.|+.+| ..+..+.+|+ ..+|++++ ++...+. + .. +.++|.+|+
T Consensus 14 C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v---~~~Pt~~~-~G~~~~~--G-------~~~~~~~l~~~l 76 (77)
T 1ilo_A 14 CQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGL---TALPGLAV-DGELKIM--G-------RVASKEEIKKIL 76 (77)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTC---SSSSCEEE-TTEEEEC--S-------SCCCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCC---CcCCEEEE-CCEEEEc--C-------CCCCHHHHHHHh
Confidence 35677888999999987 9999998 4567788999 57899998 4322221 3 24 788888775
No 217
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=92.37 E-value=1.4 Score=34.57 Aligned_cols=103 Identities=8% Similarity=-0.060 Sum_probs=61.4
Q ss_pred CCeeecCccchhhhccccCCcEEEEEEccC-hhhHHHHHHHHHHHHHhcCC--cEEEEEeCc------------------
Q 023016 94 PLSVPINQDTLNLLKDDKRKIVLAIVEDET-EEKSQKLVTTLKAAASANRE--LVFCYVGIK------------------ 152 (288)
Q Consensus 94 PLV~e~n~et~~~l~~~~~~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~------------------ 152 (288)
|-+...+.++... ...++.++++.|..+ =..-......+.+++++|++ +.|+.++.+
T Consensus 21 p~l~~~~g~~~~~--~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 21 STMKTADNRPASV--YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TTCEETTSSBGGG--GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred CccCCCCCCEeeH--HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 3344555555444 222333444445432 23345677788888888654 666665431
Q ss_pred ----------CchhHHhhcCCCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 153 ----------QFADFADTFEANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 153 ----------~~~~~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
....+.+.||+ ..+|++++.| ++. .+.+.+ ..+.+++.++++..++
T Consensus 99 ~~~~~~~~~d~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 99 NYPKLPVVTDNGGTIAQNLNI---SVYPSWALIGKDGDVQRIVKG-------SINEAQALALIRNPNA 156 (164)
T ss_dssp CCTTSCEEECTTCHHHHHTTC---CSSSEEEEECTTSCEEEEEES-------CCCHHHHHHHHHCTTC
T ss_pred CCCcceEEEcCchHHHHHcCC---CccceEEEECCCCcEEEEEcC-------CCCHHHHHHHHHHHHH
Confidence 12245566777 4689999998 443 444433 4689999999998775
No 218
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=92.32 E-value=0.28 Score=37.79 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=46.2
Q ss_pred hhcccch--hHHhhh-cceeeEeeec---cccHHHHhHcCC---CCCCeEEEEccCCCCcccccC-------CCCHHHHH
Q 023016 22 NLLPLMS--PFLIQM-RKFLTLLKML---DFSEDTMVLYDF---DKVPALVALQPSYNEHNIFYG-------PFDEEFLE 85 (288)
Q Consensus 22 ~~~~~~~--~~~~~~-~k~~~v~~~~---~~seel~~~y~~---~~~PsIvlfk~~dee~~~f~g-------~f~~~~L~ 85 (288)
.+.|.+. .+.-.. .++..+.+-. +-..+++..|++ .+.|++++|.+.......+.| ..+.+.|.
T Consensus 46 ~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~ 125 (133)
T 3fk8_A 46 ALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIY 125 (133)
T ss_dssp HHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHH
T ss_pred HHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHH
Confidence 3444444 333332 4677777776 777899999999 999999999432222223444 46788899
Q ss_pred HHHHH
Q 023016 86 EFIKQ 90 (288)
Q Consensus 86 ~FI~~ 90 (288)
+||+.
T Consensus 126 ~~l~~ 130 (133)
T 3fk8_A 126 DFFAK 130 (133)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 219
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=92.25 E-value=0.16 Score=37.65 Aligned_cols=68 Identities=12% Similarity=0.234 Sum_probs=48.7
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|+. ++. ..+.| .+.+.|.+||...
T Consensus 42 ~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 42 KMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKD--GKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTTEEEEEET--TEEEEEEEC-CCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCcccEEEEEeC--CEEEEEEec-CCHHHHHHHHHHh
Confidence 34455555555555567777777777889999999999999999963 332 23456 5778899998763
No 220
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=92.20 E-value=0.11 Score=36.54 Aligned_cols=51 Identities=22% Similarity=0.185 Sum_probs=39.8
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
++..+.+-.+-+.+++..|++.+.|++++ +++. .+.|..+.+.|.+||+..
T Consensus 34 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~----~G~~-~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 34 AVEVEYINVMENPQKAMEYGIMAVPTIVI----NGDV-EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp SEEEEEEESSSSCCTTTSTTTCCSSEEEE----TTEE-ECCSSSSSHHHHHHHHHH
T ss_pred ceEEEEEECCCCHHHHHHCCCcccCEEEE----CCEE-eeecCCCHHHHHHHHHHh
Confidence 56666666666778999999999999988 2333 677877888999999764
No 221
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=92.20 E-value=2.6 Score=34.04 Aligned_cols=92 Identities=10% Similarity=-0.014 Sum_probs=55.6
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCc-----hhHHhhcCCCCC-------------------
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF-----ADFADTFEANKK------------------- 166 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~-----~~~le~fGL~k~------------------- 166 (288)
.++++.|.. .-..-......++++++++++ +.++.|+.+.. ..+++.+++ +.
T Consensus 61 k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 61 KTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANL-TRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTC-CTTCCEECTTCHHHHHHHTTT
T ss_pred CEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCC-CCCceEECCcchHHHHhcccc
Confidence 344444443 223345667778888888873 77777765532 345666666 20
Q ss_pred --CCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcc
Q 023016 167 --SKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRT 211 (288)
Q Consensus 167 --~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gkl 211 (288)
..+|.+++.| ++. .+.+.+ ....+.+++.++++..++++.
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g-----~~~~~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAG-----PAEWASEDALKLIRAATGKAA 183 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEES-----CCCTTSHHHHHHHHHHHC---
T ss_pred ccCCCCEEEEECCCCCEEEEEec-----CCccCHHHHHHHHHHHhcccc
Confidence 2689999998 443 444443 223457899999999887653
No 222
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=91.95 E-value=0.18 Score=39.60 Aligned_cols=70 Identities=10% Similarity=0.031 Sum_probs=49.7
Q ss_pred HhhcccchhHHhhhcceeeEeeec---------cccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKML---------DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~---------~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ +..+.+-. +-..+++..|++.+.|++++|+. ......+.|..+.+.+.+||+..
T Consensus 47 ~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~-G~~v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 47 HRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKE-GRIVDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp HHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred hHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 345566655544443 55555555 55688899999999999999993 22233467888999999999886
Q ss_pred C
Q 023016 92 F 92 (288)
Q Consensus 92 s 92 (288)
.
T Consensus 125 ~ 125 (135)
T 3emx_A 125 Y 125 (135)
T ss_dssp C
T ss_pred h
Confidence 4
No 223
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=91.85 E-value=1.4 Score=42.96 Aligned_cols=112 Identities=8% Similarity=0.108 Sum_probs=71.9
Q ss_pred CeeecCccchhhhccccCCcEEEEEEcc-ChhhHHHHHHHHHHHHHhcC--------C-cEEEEEeCcCchhHHhhcCCC
Q 023016 95 LSVPINQDTLNLLKDDKRKIVLAIVEDE-TEEKSQKLVTTLKAAASANR--------E-LVFCYVGIKQFADFADTFEAN 164 (288)
Q Consensus 95 LV~e~n~et~~~l~~~~~~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~r--------g-l~Fv~VD~~~~~~~le~fGL~ 164 (288)
.|.++|.+++..+.......++++.|+. -=..-..+...+.++|+.++ + +.|+.||.+.+..+.+.||+
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V- 102 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI- 102 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC-
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC-
Confidence 4788888888763222222344444443 22445678889999999997 2 99999999999889999999
Q ss_pred CCCCCCeEEEEe-CCc--eeeccCCCCCC------CCCCCHHHHHHHHHHHhcCc
Q 023016 165 KKSKLPKMVVWD-GNE--NYLTVIGSESI------DEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 165 k~~~lPai~I~d-~~~--KY~~~~~~~~~------~~e~t~e~I~~Fl~~fl~Gk 210 (288)
..+|++++++ ++. ...+. |.... ...++.+.+.+.++..++.+
T Consensus 103 --~~~PTlilf~~gg~~~~~~y~-G~r~~e~L~fI~k~l~~~eLe~~~e~Link~ 154 (470)
T 3qcp_A 103 --NFVPRLFFFYPRDSCRSNEEC-GTSSLEHVAFENSHLEVDELESEVRRLVNKH 154 (470)
T ss_dssp --CSSCEEEEEEESSCCCTTSCC-CCCCEEEEECSCTTCCHHHHHHHHHHHHHHH
T ss_pred --CccCeEEEEECCCceEEEEee-CCCCHHHHHHHHHhcCHHHHHHHHHHHhhhc
Confidence 5799999887 331 11122 11111 11256677766666655433
No 224
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=91.70 E-value=0.85 Score=35.02 Aligned_cols=46 Identities=22% Similarity=0.224 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcCC--cEEEEEeCcCchh-------------------------HHhhcCCCCCCCCCeEEEEe
Q 023016 128 QKLVTTLKAAASANRE--LVFCYVGIKQFAD-------------------------FADTFEANKKSKLPKMVVWD 176 (288)
Q Consensus 128 e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~-------------------------~le~fGL~k~~~lPai~I~d 176 (288)
......+.++++++++ +.|+.++.+.... +.+.||+ ..+|.+++.|
T Consensus 47 ~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i---~~~P~~~lid 119 (148)
T 3hcz_A 47 QQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI---YATPVLYVLD 119 (148)
T ss_dssp CSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC---CSSCEEEEEC
T ss_pred HHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc---CCCCEEEEEC
Confidence 3456677778888776 8888887764333 5666777 4689999998
No 225
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=91.67 E-value=0.42 Score=36.23 Aligned_cols=70 Identities=10% Similarity=0.002 Sum_probs=50.7
Q ss_pred HhhcccchhHHhhhcceeeEeeeccc----------------------cHHHHhHcCCCCCCeEEEEccCCCCccccc--
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDF----------------------SEDTMVLYDFDKVPALVALQPSYNEHNIFY-- 76 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~----------------------seel~~~y~~~~~PsIvlfk~~dee~~~f~-- 76 (288)
+..+|.+..+....+++..+++..+- ..++...|++...|+++++.+.. +...+.
T Consensus 40 ~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G-~i~~~~~~ 118 (136)
T 1lu4_A 40 NAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADG-TSTFVNNP 118 (136)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTS-CEEEECCS
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCC-cEEEEEcC
Confidence 44566666666555567777776554 56788899999999999996532 322567
Q ss_pred -CCCCHHHHHHHHHHc
Q 023016 77 -GPFDEEFLEEFIKQN 91 (288)
Q Consensus 77 -g~f~~~~L~~FI~~n 91 (288)
|..+.+.|.++|+..
T Consensus 119 ~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 119 TAAMSQDELSGRVAAL 134 (136)
T ss_dssp SSCCCHHHHHHHHHHC
T ss_pred CCccCHHHHHHHHHHH
Confidence 888899999999864
No 226
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=91.56 E-value=2.8 Score=32.59 Aligned_cols=69 Identities=10% Similarity=0.180 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHhc-CC--cEEEEEeCcCch-------------------------hHHhhcCCCCCCCCCeEEEEe-C
Q 023016 127 SQKLVTTLKAAASAN-RE--LVFCYVGIKQFA-------------------------DFADTFEANKKSKLPKMVVWD-G 177 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~-rg--l~Fv~VD~~~~~-------------------------~~le~fGL~k~~~lPai~I~d-~ 177 (288)
-......+.+++++| ++ +.|+.++.+... .+.+.||+ ..+|.+++.| +
T Consensus 50 C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v---~~~P~~~lid~~ 126 (150)
T 3fw2_A 50 QKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSI---YKIPANILLSSD 126 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC---CSSSEEEEECTT
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCC---CccCeEEEECCC
Confidence 456778888888888 44 777777665332 45667787 4789999998 4
Q ss_pred Cc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 178 NE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 178 ~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+. .+.. .+.+++.+.++..++
T Consensus 127 G~i~~~~----------~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 127 GKILAKN----------LRGEELKKKIENIVE 148 (150)
T ss_dssp SBEEEES----------CCHHHHHHHHHHHHH
T ss_pred CEEEEcc----------CCHHHHHHHHHHHHh
Confidence 43 3322 368888888887653
No 227
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=91.39 E-value=1.2 Score=36.34 Aligned_cols=82 Identities=18% Similarity=0.271 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeCc-----------------------------CchhHHhhcCCCCCCCCCeEEEE
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGIK-----------------------------QFADFADTFEANKKSKLPKMVVW 175 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~~-----------------------------~~~~~le~fGL~k~~~lPai~I~ 175 (288)
-......+.+++++|++ +.|+.++.+ ....+.+.||+ ...|.+++.
T Consensus 61 C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~~~li 137 (196)
T 2ywi_A 61 VKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDA---ACTPDFYIF 137 (196)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTC---CEESEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCC---CCCCeEEEE
Confidence 34566777778877765 777777653 12345667777 457999999
Q ss_pred e-CCc-eeeccCCCCC---CCCCCCHHHHHHHHHHHhcCccc
Q 023016 176 D-GNE-NYLTVIGSES---IDEEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 176 d-~~~-KY~~~~~~~~---~~~e~t~e~I~~Fl~~fl~Gklk 212 (288)
| ++. .|.... ... .....+.++|.+.++..++|+-.
T Consensus 138 d~~G~i~~~~~~-~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 138 DRDLKCVYRGQL-DDSRPNNGIPVTGESIRAALDALLEGRPV 178 (196)
T ss_dssp ETTCBEEEEECS-SSCCTTTCCCCCCHHHHHHHHHHHHTCCC
T ss_pred cCCCeEEEcccc-CcccccccCccCHHHHHHHHHHHHcCCCC
Confidence 8 443 343110 000 01246889999999999988643
No 228
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=91.32 E-value=0.19 Score=38.68 Aligned_cols=72 Identities=17% Similarity=0.187 Sum_probs=48.5
Q ss_pred hhcccchhHHhhh---cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCC-Cccccc-CCCCHHHHHHHHHHcCC
Q 023016 22 NLLPLMSPFLIQM---RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYN-EHNIFY-GPFDEEFLEEFIKQNFL 93 (288)
Q Consensus 22 ~~~~~~~~~~~~~---~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~de-e~~~f~-g~f~~~~L~~FI~~nsl 93 (288)
.+.|.+..+.... .++..+.+-.+-..+++..|++...|++++|++... ....|. |..+.+.|.+||....-
T Consensus 42 ~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 42 QLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 3445555544443 346666555555667788899999999999985322 122466 55788999999998743
No 229
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=90.30 E-value=0.043 Score=42.35 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=51.5
Q ss_pred HHHHHHH---HHHHHhcCC-cEEEEEeCc--CchhHHhhcCCCCCCCCCeEEEEe-C-Cce---eeccCCCCCCCCCCCH
Q 023016 128 QKLVTTL---KAAASANRE-LVFCYVGIK--QFADFADTFEANKKSKLPKMVVWD-G-NEN---YLTVIGSESIDEEDQG 196 (288)
Q Consensus 128 e~~~~~l---~~vAk~~rg-l~Fv~VD~~--~~~~~le~fGL~k~~~lPai~I~d-~-~~K---Y~~~~~~~~~~~e~t~ 196 (288)
..+...+ .++++.+++ +.|+.+|.+ +...+.+.||+ ..+|++++++ . +.. +.+.+ ..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v---~~~Pt~~~~d~~~G~~~~~~~~~G-------~~~~ 104 (130)
T 2lst_A 35 QQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRV---PGTPTFVFLVPKAGAWEEVGRLFG-------SRPR 104 (130)
Confidence 3455556 777887877 888888874 45667888998 5789999986 2 322 22322 4578
Q ss_pred HHHHHHHHHHhcCc
Q 023016 197 SQISRFLEGYREGR 210 (288)
Q Consensus 197 e~I~~Fl~~fl~Gk 210 (288)
+++.+|++..+++.
T Consensus 105 ~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 105 AEFLKELRQVCVKG 118 (130)
Confidence 88999999887654
No 230
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=90.87 E-value=0.25 Score=37.32 Aligned_cols=68 Identities=10% Similarity=0.126 Sum_probs=43.9
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccc----cHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDF----SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIK 89 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~----seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~ 89 (288)
|.+.|.+..+....+ ++..+.+.... ..+++..|++.+.|++++|++. .....+.|..+.+.|.+||+
T Consensus 45 ~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 45 RKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDG-QINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETT-EEEEECCTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECC-EEEEEecCCCCHHHHHHHhh
Confidence 455666665554332 33333222211 2478899999999999999732 22345788889999999985
No 231
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=90.75 E-value=0.54 Score=35.41 Aligned_cols=70 Identities=10% Similarity=0.114 Sum_probs=49.1
Q ss_pred HhhcccchhHHhhhcceeeEeeec-----------------------cccHHHHhHcCCCCCCeEEEEccCCCCcccccC
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKML-----------------------DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG 77 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~-----------------------~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g 77 (288)
+..+|.+..+....+++..+++.. +...+++..|++...|+++++.+.. ....+.|
T Consensus 41 ~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g-~i~~~~g 119 (136)
T 1zzo_A 41 QGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHG-NVDVVRG 119 (136)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTC-CEEEEES
T ss_pred HHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCC-CEEEEec
Confidence 445566666555544666666654 3346788899999999999997532 2225778
Q ss_pred CCCHHHHHHHHHHc
Q 023016 78 PFDEEFLEEFIKQN 91 (288)
Q Consensus 78 ~f~~~~L~~FI~~n 91 (288)
..+.+.|.++|...
T Consensus 120 ~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 120 RMSQDELTRRVTAL 133 (136)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 88899999999764
No 232
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=90.63 E-value=0.27 Score=42.00 Aligned_cols=71 Identities=15% Similarity=0.266 Sum_probs=54.6
Q ss_pred HhhcccchhHHhhhcc-eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcC
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ns 92 (288)
+.+.|.+..+....+. +..+.+-.+-..+++..|++.+.|++++|+. ......+.|..+.+.|.+||....
T Consensus 46 ~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 46 KMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEEEEET-TEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEEEEEC-CeEEEEeccccChHHHHHHHHhhc
Confidence 5566777766665553 7777777888889999999999999999973 122235678889999999999874
No 233
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=90.62 E-value=0.31 Score=37.53 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=44.2
Q ss_pred hhcccchhHHhhh-cceeeEeeec-------cccHHHHhHcCCCCCCeEEEEccCCCCccc-ccCCCCHHHHHHHHHH
Q 023016 22 NLLPLMSPFLIQM-RKFLTLLKML-------DFSEDTMVLYDFDKVPALVALQPSYNEHNI-FYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 22 ~~~~~~~~~~~~~-~k~~~v~~~~-------~~seel~~~y~~~~~PsIvlfk~~dee~~~-f~g~f~~~~L~~FI~~ 90 (288)
.+.|.+..+.-.. .++..+.+-. +-..+++.+|++.+.|++++|++ ..... +.| .+.+.|.+||..
T Consensus 48 ~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~--~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 48 QAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT--PQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTS--SCEEEGGGG-GCHHHHHHHHHC
T ss_pred HhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcC--CceEecccc-CCHHHHHHHHhc
Confidence 3445555444333 2566666555 56678999999999999999986 22322 333 577889999874
No 234
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=89.85 E-value=0.051 Score=39.59 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=46.1
Q ss_pred hhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 22 NLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 22 ~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
.+.|.+..+..... ++..+.+-.+-..+++..|++...|++++|+. ......+.|..+.+.|.+||..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 36 MIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKN-GQVVDRLVGAQPKEALKERIDK 104 (106)
Confidence 34454444443333 45556666666788999999999999999953 2223346777778889999875
No 235
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=90.39 E-value=2.1 Score=32.77 Aligned_cols=83 Identities=7% Similarity=0.052 Sum_probs=46.1
Q ss_pred CcEEEEEEccC-hhhHHHHHHHHHH---HHHhcCC--cEEEEEeCcCchh----H--------------------HhhcC
Q 023016 113 KIVLAIVEDET-EEKSQKLVTTLKA---AASANRE--LVFCYVGIKQFAD----F--------------------ADTFE 162 (288)
Q Consensus 113 ~~~l~~lf~~~-~e~~e~~~~~l~~---vAk~~rg--l~Fv~VD~~~~~~----~--------------------le~fG 162 (288)
+.++++.|..+ -..-......+.+ +++++++ +.|+.++.+.... + .+.||
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 34555555432 2223344444444 6666644 7777776653222 2 22566
Q ss_pred CCCCCCCCeEEEEe-CCceeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 163 ANKKSKLPKMVVWD-GNENYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 163 L~k~~~lPai~I~d-~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+ ..+|++++.| ++. -.. . ..+.++|.++++...
T Consensus 107 v---~~~P~~~lid~~G~-i~~-~-------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 107 I---RATPTIYLLDGRKR-VIL-K-------DTSMEQLIDYLATQA 140 (142)
T ss_dssp C---CSSSEEEEECTTCB-EEE-C-------SCCHHHHHHHHHC--
T ss_pred C---CCCCeEEEECCCCC-EEe-c-------CCCHHHHHHHHHHHc
Confidence 6 4689999998 443 211 2 368999999998653
No 236
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=90.01 E-value=0.44 Score=37.30 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=41.2
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCC---cccccCCCCHHHHHHHHHHc
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNE---HNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee---~~~f~g~f~~~~L~~FI~~n 91 (288)
++..+.+-.+-..+++..|++.+.|++++|+..+++ ...+.|. +.+.|.+||...
T Consensus 70 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 70 YVTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp ECEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred CEEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 466666667777899999999999999999622232 2235666 788999999865
No 237
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=90.00 E-value=0.38 Score=36.82 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=49.4
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccc-------------------------cHHHHhHcCCCCCCeEEEEccCCCCcc
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDF-------------------------SEDTMVLYDFDKVPALVALQPSYNEHN 73 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~-------------------------seel~~~y~~~~~PsIvlfk~~dee~~ 73 (288)
+..+|.+..+.-..+ ++..+++..+- ..+++..|++...|+++++.+...-..
T Consensus 50 ~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~ 129 (145)
T 3erw_A 50 KKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEK 129 (145)
T ss_dssp HHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEE
Confidence 445676777666654 67777776543 458899999999999999964322223
Q ss_pred cccCCCCHHHHHHHHH
Q 023016 74 IFYGPFDEEFLEEFIK 89 (288)
Q Consensus 74 ~f~g~f~~~~L~~FI~ 89 (288)
.+.|..+.+.|.+||+
T Consensus 130 ~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 130 TKIGPMTAEQLKEWTE 145 (145)
T ss_dssp EEESCCCHHHHHHHHC
T ss_pred EEcCCcCHHHHHHhhC
Confidence 4678889999998873
No 238
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=89.99 E-value=0.15 Score=38.96 Aligned_cols=67 Identities=13% Similarity=0.262 Sum_probs=46.5
Q ss_pred hcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 23 LLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 23 ~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.|.+..+....+++..+.+-.+-..+++..|++...|++++|+.. .....+.| .+.+.|.+||...
T Consensus 54 ~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 54 IAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDG-AEADKVVG-ARKDDLQNTIVKH 120 (130)
T ss_dssp SHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSCCCCBCTTT-TCCBCCCT-TCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccceEEEEeCC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 3444444444444677777777777899999999999999999632 22234556 5777899999875
No 239
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=89.99 E-value=0.57 Score=35.46 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=46.4
Q ss_pred HhhcccchhHHhhhcceeeEeeecc-ccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLD-FSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~-~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+++..+.+-.+ -..+++..|++.+.|++++|++ ++. ..+.|. ..+.|.+||+..
T Consensus 53 ~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~~G~-~~~~l~~~i~~~ 122 (124)
T 1faa_A 53 KAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKE--NSVVGEVTGA-KYDKLLEAIQAA 122 (124)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSSSEEEEEET--TEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCeeeEEEEEeC--CcEEEEEcCC-CHHHHHHHHHHh
Confidence 3445555555544455666666555 4678999999999999999974 222 235665 488899999764
No 240
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=89.86 E-value=0.46 Score=36.23 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=49.7
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCC--CC-cccccCCCCHHHHHHHHHHcCCC
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSY--NE-HNIFYGPFDEEFLEEFIKQNFLP 94 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~d--ee-~~~f~g~f~~~~L~~FI~~nslP 94 (288)
+.+.|.+..+.....++..+.+-.+-..+++..|++.+.|++++|++.. ++ ...+.|. ..++|+++|..+.-|
T Consensus 39 ~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~-~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 39 QRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGA-DVSRIKADIEKFKHH 114 (118)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCC-CHHHHHHHHHHhhhc
Confidence 3455555555444467777777778788999999999999999997511 11 2234564 456699999887544
No 241
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=89.86 E-value=0.53 Score=32.41 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=36.9
Q ss_pred cccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCC-CHHHHHHHH
Q 023016 24 LPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPF-DEEFLEEFI 88 (288)
Q Consensus 24 ~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f-~~~~L~~FI 88 (288)
.|.+..+..... ++..+.+- +.+++..|++.+.|++++ ++ ...+.|.. +.+.|.+||
T Consensus 18 ~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~----~G-~~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 18 EKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV----DG-ELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE----TT-EEEECSSCCCHHHHHHHC
T ss_pred HHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE----CC-EEEEcCCCCCHHHHHHHh
Confidence 344444433333 34444333 788999999999999988 23 33344876 888898886
No 242
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=89.77 E-value=0.61 Score=37.42 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=49.8
Q ss_pred HhhcccchhHHhhhcc-eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc---------ccccC-CCCHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH---------NIFYG-PFDEEFLEEFIK 89 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~---------~~f~g-~f~~~~L~~FI~ 89 (288)
+.+.|.+..+.-..+. +..+.+-.+-..+++..|++.+.|++++|++.. .. ..+.| ..+.+.|.++|+
T Consensus 39 ~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~-~v~~~~g~~~~~~~~G~~~~~~~l~~~l~ 117 (149)
T 3gix_A 39 LQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ-HMKVDYGSPDHTKFVGSFKTKQDFIDLIE 117 (149)
T ss_dssp HHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE-EEEEECSSSCCSCEESCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe-EEEeecCCCCCCeEeeecCCHHHHHHHHH
Confidence 4455665555544443 777777778889999999999999999998421 12 24567 667888988887
Q ss_pred Hc
Q 023016 90 QN 91 (288)
Q Consensus 90 ~n 91 (288)
..
T Consensus 118 ~~ 119 (149)
T 3gix_A 118 VI 119 (149)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 243
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=89.75 E-value=0.8 Score=34.84 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=42.0
Q ss_pred ceeeEeeecc--ccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcCCC
Q 023016 36 KFLTLLKMLD--FSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLP 94 (288)
Q Consensus 36 k~~~v~~~~~--~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~nslP 94 (288)
++..+.+-.+ -..+++..|++.+.|++++|.+.......+.|..+.+.|.+||+...-|
T Consensus 62 ~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 62 HFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4455544443 4678999999999999999954222233467888899999999986443
No 244
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=89.71 E-value=1.1 Score=38.36 Aligned_cols=72 Identities=11% Similarity=0.038 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEe-CCcee-eccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 129 KLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWD-GNENY-LTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 129 ~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d-~~~KY-~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
...+.|.++|+.++++.|+.+.. ..++..+|+ + .|+++++. .+.++ .+.+ . .....+.+.|.+|++.-
T Consensus 41 ~~~~~f~~~A~~l~~~~F~~t~~---~~v~~~~~v-~---~p~i~lfk~~~~~~~~~~~-~--~~g~~~~~~l~~fi~~~ 110 (227)
T 4f9z_D 41 PAVPILHSMVQKFPGVSFGISTD---SEVLTHYNI-T---GNTICLFRLVDNEQLNLED-E--DIESIDATKLSRFIEIN 110 (227)
T ss_dssp THHHHHHHHTTTCTTSEEEEECC---HHHHHHTTC-C---SSEEEEEETTTTEEEEECH-H--HHHTCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCceEEEECC---HHHHHHcCC-C---CCeEEEEEecCcccccccc-c--ccCCCCHHHHHHHHHHh
Confidence 56778999999996699998754 366778888 3 39999888 33232 2321 0 00147899999999987
Q ss_pred hcCc
Q 023016 207 REGR 210 (288)
Q Consensus 207 l~Gk 210 (288)
.-+-
T Consensus 111 ~~pl 114 (227)
T 4f9z_D 111 SLHM 114 (227)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 5443
No 245
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=89.54 E-value=0.51 Score=35.43 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=43.5
Q ss_pred HhhcccchhHHhhhc------ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCC-cccccCCCCHHHHHHHHHHc
Q 023016 21 RNLLPLMSPFLIQMR------KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~------k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee-~~~f~g~f~~~~L~~FI~~n 91 (288)
+.+.|.+..+....+ ++..+.+-.+-. +++. ++.+.|++++|++.... ...|.|..+.+.|.+||...
T Consensus 41 ~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 41 KALAPKYEELGALYAKSEFKDRVVIAKVDATAN-DVPD--EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS-CCSS--CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHhhcccCCceEEEEEECccc-cccc--ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhc
Confidence 344555555544433 344444433322 2443 89999999999864221 45688888999999999876
No 246
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=89.17 E-value=4.3 Score=31.32 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEEeCcC-----------------------chhHHhhcCCCCCCCCCeEEEEe-CCc-e
Q 023016 126 KSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKSKLPKMVVWD-GNE-N 180 (288)
Q Consensus 126 ~~e~~~~~l~~vAk~~rgl~Fv~VD~~~-----------------------~~~~le~fGL~k~~~lPai~I~d-~~~-K 180 (288)
.-......+++++++ .++.|+.++.+. ...+.+.||+ ..+|++++.+ ++. .
T Consensus 56 ~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~~~~id~~G~i~ 131 (156)
T 1kng_A 56 PCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV---YGVPETFVVGREGTIV 131 (156)
T ss_dssp HHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC---CSSCEEEEECTTSBEE
T ss_pred hHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc---CccCeEEEEcCCCCEE
Confidence 345666777777766 337777776432 2245566777 4689888887 443 3
Q ss_pred eeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 181 YLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 181 Y~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+.+.+ ..+.+++.++++..++
T Consensus 132 ~~~~g-------~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 132 YKLVG-------PITPDNLRSVLLPQME 152 (156)
T ss_dssp EEEES-------CCCHHHHHHTHHHHHH
T ss_pred EEEeC-------CCCHHHHHHHHHHHHH
Confidence 43433 4688899999988764
No 247
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=88.65 E-value=0.58 Score=41.03 Aligned_cols=70 Identities=17% Similarity=0.314 Sum_probs=53.2
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCc-ccccCCCCHHHHHHHHHHcC
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEH-NIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~-~~f~g~f~~~~L~~FI~~ns 92 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|+. ++. ..+.|..+.+.+..||....
T Consensus 42 ~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 42 LQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQN--GQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp TTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEET--TEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEEC--CEEEEEeeCCCCHHHHHHHHHHHc
Confidence 345566655555444 47777788888899999999999999999973 322 34788889999999999874
No 248
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=88.51 E-value=3.8 Score=34.63 Aligned_cols=84 Identities=12% Similarity=0.184 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeCc-----------------------------CchhHHhhcCCCCCCCCCeEEEE
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGIK-----------------------------QFADFADTFEANKKSKLPKMVVW 175 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~~-----------------------------~~~~~le~fGL~k~~~lPai~I~ 175 (288)
-......|.+++++|++ +.|+.|+.+ ....+.+.||+ ...|.+++.
T Consensus 74 C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v---~~~P~~~li 150 (218)
T 3u5r_E 74 VVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGA---ACTPDFFLY 150 (218)
T ss_dssp HHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTC---CEESEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCC---CCCCeEEEE
Confidence 34566778888888876 788887763 12345677787 457999999
Q ss_pred e-CCc-eeeccC-CC-CCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 176 D-GNE-NYLTVI-GS-ESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 176 d-~~~-KY~~~~-~~-~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
| ++. .|.-.. .+ .......+.++|.+.++..++|+-.+
T Consensus 151 D~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 151 DRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVG 192 (218)
T ss_dssp CTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCC
T ss_pred CCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCCC
Confidence 8 443 343110 00 00112467899999999999997543
No 249
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=88.24 E-value=3.6 Score=33.33 Aligned_cols=83 Identities=17% Similarity=0.251 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHhcCC-cEEEEEeCc-----------------------------CchhHHhhcCCCCCCCCCeEEEEe
Q 023016 127 SQKLVTTLKAAASANRE-LVFCYVGIK-----------------------------QFADFADTFEANKKSKLPKMVVWD 176 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg-l~Fv~VD~~-----------------------------~~~~~le~fGL~k~~~lPai~I~d 176 (288)
-......+++++++|++ +.|+.++.+ ....+.+.||+ ...|.+++.+
T Consensus 48 C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~~~lid 124 (188)
T 2cvb_A 48 VKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRA---LRTPEVFLFD 124 (188)
T ss_dssp HHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTC---CEESEEEEEC
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCC---CCCCeEEEEC
Confidence 34556678888888888 778777762 12245566777 4579999998
Q ss_pred -CCc-eee-ccCCCCCCCCCCCHHHHHHHHHHHhcCccc
Q 023016 177 -GNE-NYL-TVIGSESIDEEDQGSQISRFLEGYREGRTE 212 (288)
Q Consensus 177 -~~~-KY~-~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklk 212 (288)
++. .|. ............+.++|.+.++..++|+-.
T Consensus 125 ~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 125 ERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp TTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCCC
T ss_pred CCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCCC
Confidence 443 332 000000000123678999999999988643
No 250
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=88.18 E-value=0.95 Score=34.64 Aligned_cols=71 Identities=13% Similarity=0.184 Sum_probs=47.5
Q ss_pred HhhcccchhHHhhhcc-eeeEeeec---------------------------cccHHHHhHcCCCCCCeEEEEccCCCCc
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKML---------------------------DFSEDTMVLYDFDKVPALVALQPSYNEH 72 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~---------------------------~~seel~~~y~~~~~PsIvlfk~~dee~ 72 (288)
+..+|.+..+.-..++ +..+++.. +...+++..|++...|+++++.+...-.
T Consensus 45 ~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~ 124 (148)
T 2b5x_A 45 KEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLR 124 (148)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEE
T ss_pred HHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEE
Confidence 4456666665544433 66776653 4456889999999999999995432222
Q ss_pred ccccCCCCHHHHHHHHHHc
Q 023016 73 NIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 73 ~~f~g~f~~~~L~~FI~~n 91 (288)
..+.|..+.+.|.++|+..
T Consensus 125 ~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 125 HFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp EEEESCSTTHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHH
Confidence 3356777788888888753
No 251
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=88.12 E-value=3.7 Score=31.55 Aligned_cols=78 Identities=10% Similarity=0.150 Sum_probs=46.8
Q ss_pred cEEEEEEccC-hhhHHHHHHHHHH---HHHhcCC--cEEEEEeCcCchh------------------------HHhhcCC
Q 023016 114 IVLAIVEDET-EEKSQKLVTTLKA---AASANRE--LVFCYVGIKQFAD------------------------FADTFEA 163 (288)
Q Consensus 114 ~~l~~lf~~~-~e~~e~~~~~l~~---vAk~~rg--l~Fv~VD~~~~~~------------------------~le~fGL 163 (288)
.++++.|..+ -..-......+.+ +++++++ +.++.++.+.... +.+.||+
T Consensus 32 k~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 111 (142)
T 3eur_A 32 EYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDL 111 (142)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCC
T ss_pred CEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCC
Confidence 4455555432 2334456667777 7777754 7777777664321 2344555
Q ss_pred CCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHH
Q 023016 164 NKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLE 204 (288)
Q Consensus 164 ~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~ 204 (288)
..+|++++.| ++. .+. ..+.++|++|++
T Consensus 112 ---~~~P~~~lid~~G~i~~~----------~~~~~~l~~~l~ 141 (142)
T 3eur_A 112 ---RAIPTLYLLDKNKTVLLK----------DATLQKVEQYLA 141 (142)
T ss_dssp ---TTCSEEEEECTTCBEEEE----------EECHHHHHHHHH
T ss_pred ---CcCCeEEEECCCCcEEec----------CCCHHHHHHHHh
Confidence 4689999998 343 232 146788998886
No 252
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=88.08 E-value=1.1 Score=36.50 Aligned_cols=93 Identities=10% Similarity=0.118 Sum_probs=54.8
Q ss_pred EEEEEEcc-ChhhHHHHHHHHHHHHHhcCC-cEEEEEeCcCchh-HHhhcCCCCCCCCCeEEEEe-CCc-eeeccCCCCC
Q 023016 115 VLAIVEDE-TEEKSQKLVTTLKAAASANRE-LVFCYVGIKQFAD-FADTFEANKKSKLPKMVVWD-GNE-NYLTVIGSES 189 (288)
Q Consensus 115 ~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~~-~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~~~~ 189 (288)
++++.|.. -=..-......|.++++.++. +.|+.||.+..+. ....|++ ....+|++++++ ++. .+.+.+ ...
T Consensus 48 ~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~-~~~~~Pt~~~~d~~G~~~~~~~G-~~~ 125 (164)
T 1sen_A 48 PLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSP-DGGYIPRILFLDPSGKVHPEIIN-ENG 125 (164)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCT-TCSCSSEEEEECTTSCBCTTCCC-TTS
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcc-cCCcCCeEEEECCCCCEEEEEeC-CCC
Confidence 34444443 223344566677777666555 7777777765554 5667777 445699999997 432 222222 100
Q ss_pred CC----CCCCHHHHHHHHHHHhcC
Q 023016 190 ID----EEDQGSQISRFLEGYREG 209 (288)
Q Consensus 190 ~~----~e~t~e~I~~Fl~~fl~G 209 (288)
.. ...+.++|.++++..++.
T Consensus 126 ~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 126 NPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp CTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred ccchhcccCCHHHHHHHHHHHHHh
Confidence 00 026789999999988764
No 253
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=87.87 E-value=1.3 Score=34.44 Aligned_cols=71 Identities=13% Similarity=0.075 Sum_probs=48.0
Q ss_pred HhhcccchhHHhhh--cceeeEeeeccccH-----------------------HHHhHcCCCCCCeEEEEccCCCCcccc
Q 023016 21 RNLLPLMSPFLIQM--RKFLTLLKMLDFSE-----------------------DTMVLYDFDKVPALVALQPSYNEHNIF 75 (288)
Q Consensus 21 ~~~~~~~~~~~~~~--~k~~~v~~~~~~se-----------------------el~~~y~~~~~PsIvlfk~~dee~~~f 75 (288)
+..+|.+..+.... +++..+++..+-.. +++..|++...|+++++.+...-...+
T Consensus 46 ~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 125 (152)
T 2lja_A 46 RGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISAN 125 (152)
T ss_dssp GGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESS
T ss_pred HHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEcc
Confidence 45556665555443 34777776655543 788899999999999997533222335
Q ss_pred cCCCCHHHHHHHHHHc
Q 023016 76 YGPFDEEFLEEFIKQN 91 (288)
Q Consensus 76 ~g~f~~~~L~~FI~~n 91 (288)
.|..+.+.|.++|+..
T Consensus 126 ~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 126 MTRPSDPKTAEKFNEL 141 (152)
T ss_dssp CCCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 6767788899988764
No 254
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=87.59 E-value=1.1 Score=35.06 Aligned_cols=71 Identities=10% Similarity=0.008 Sum_probs=51.4
Q ss_pred HhhcccchhHHhhhcceeeEeeec---------------------------cccHHHHhHcCCCCCCeEEEEccCCCCcc
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKML---------------------------DFSEDTMVLYDFDKVPALVALQPSYNEHN 73 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~---------------------------~~seel~~~y~~~~~PsIvlfk~~dee~~ 73 (288)
+..+|.+..+.-.. ++..+++.. +...+++..|++...|+++++.+...-..
T Consensus 46 ~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (154)
T 3ia1_A 46 KAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVA 124 (154)
T ss_dssp HHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEE
T ss_pred HHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEE
Confidence 44566666665555 777777766 35678889999999999998864322223
Q ss_pred cccCCCCHHHHHHHHHHcC
Q 023016 74 IFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 74 ~f~g~f~~~~L~~FI~~ns 92 (288)
.+.|..+.+.|.++|+...
T Consensus 125 ~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 125 LFAGRAGREALLDALLLAG 143 (154)
T ss_dssp EEESBCCHHHHHHHHHHTT
T ss_pred EEcCCCCHHHHHHHHHhcc
Confidence 4678889999999998863
No 255
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=87.44 E-value=1.2 Score=35.72 Aligned_cols=55 Identities=11% Similarity=0.054 Sum_probs=39.1
Q ss_pred cceeeEeeecccc-----------HHHHhHcCCCCCCeEEEEccCCCCcccccCCC--CHHHHHHHHHH
Q 023016 35 RKFLTLLKMLDFS-----------EDTMVLYDFDKVPALVALQPSYNEHNIFYGPF--DEEFLEEFIKQ 90 (288)
Q Consensus 35 ~k~~~v~~~~~~s-----------eel~~~y~~~~~PsIvlfk~~dee~~~f~g~f--~~~~L~~FI~~ 90 (288)
.++..+++-.+-. .+++..|++.+.|+++++.+.......+ |.. +.+.|.+||+.
T Consensus 82 ~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 82 VHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp HHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred CcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 5677776655433 4889999999999999995432223335 766 78888888875
No 256
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=86.45 E-value=4.7 Score=31.81 Aligned_cols=70 Identities=7% Similarity=-0.030 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeC-----------------------cCchhHHhhcCCCCCCCCCeEEEEe-CCc-ee
Q 023016 127 SQKLVTTLKAAASANRELVFCYVGI-----------------------KQFADFADTFEANKKSKLPKMVVWD-GNE-NY 181 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rgl~Fv~VD~-----------------------~~~~~~le~fGL~k~~~lPai~I~d-~~~-KY 181 (288)
-......+.+++++ ++.|+.++. +....+.+.||+ ..+|+.++.+ ++. .+
T Consensus 66 C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~~~lid~~G~i~~ 140 (168)
T 2b1k_A 66 CRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGV---YGAPETFLIDGNGIIRY 140 (168)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTC---CSSSEEEEECTTSBEEE
T ss_pred HHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCc---cccCEEEEECCCCeEEE
Confidence 34556667777765 555555542 222345667787 4689777777 443 34
Q ss_pred eccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 182 LTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 182 ~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
.+.+ ..+.+.+.++++..++
T Consensus 141 ~~~g-------~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 141 RHAG-------DLNPRVWEEEIKPLWE 160 (168)
T ss_dssp EEES-------CCCHHHHHHTTHHHHH
T ss_pred EEeC-------CCCHHHHHHHHHHHHH
Confidence 4433 4678888888887664
No 257
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=86.18 E-value=9.3 Score=30.81 Aligned_cols=71 Identities=11% Similarity=-0.036 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCc-----------------------CchhHHhhcCCCCCCCCCeEEEEe-CCc-ee
Q 023016 127 SQKLVTTLKAAASANRELVFCYVGIK-----------------------QFADFADTFEANKKSKLPKMVVWD-GNE-NY 181 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rgl~Fv~VD~~-----------------------~~~~~le~fGL~k~~~lPai~I~d-~~~-KY 181 (288)
-......+++++++ ++.|+.++.+ ....+.+.||+ ..+|..++.+ ++. .|
T Consensus 73 C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v---~~~P~~~lid~~G~i~~ 147 (176)
T 3kh7_A 73 CRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGV---YGAPETYLIDKQGIIRH 147 (176)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTC---CSSCEEEEECTTCBEEE
T ss_pred HHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCC---CCCCeEEEECCCCeEEE
Confidence 44556667777766 6555555521 12244556677 4689888888 443 45
Q ss_pred eccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 182 LTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 182 ~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
.+.+ ..+.+.+.++++..++.
T Consensus 148 ~~~g-------~~~~~~l~~~l~~~l~~ 168 (176)
T 3kh7_A 148 KIVG-------VVDQKVWREQLAPLYQQ 168 (176)
T ss_dssp EEES-------CCCHHHHHHHTHHHHHH
T ss_pred EEcC-------CCCHHHHHHHHHHHHHH
Confidence 4443 46888999988888763
No 258
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=86.15 E-value=3.6 Score=32.93 Aligned_cols=64 Identities=19% Similarity=0.120 Sum_probs=41.5
Q ss_pred HHHHHhcCC-cEEEEEeCcCchhH--------------------------HhhcCCCCCCCCCeEEEEe-CCc-eeeccC
Q 023016 135 KAAASANRE-LVFCYVGIKQFADF--------------------------ADTFEANKKSKLPKMVVWD-GNE-NYLTVI 185 (288)
Q Consensus 135 ~~vAk~~rg-l~Fv~VD~~~~~~~--------------------------le~fGL~k~~~lPai~I~d-~~~-KY~~~~ 185 (288)
.++++.+++ +.|+.+|.++.... .+.||+ ..+|++++.+ ++. .+...+
T Consensus 73 ~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~Pt~~lid~~G~~~~~~~G 149 (172)
T 3f9u_A 73 PKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGA---NAQPFYVLIDNEGNPLNKSYA 149 (172)
T ss_dssp HHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHHHHSC---CCSSEEEEECTTSCBSSCCBC
T ss_pred HHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHHHcCC---CCcceEEEECCCCCEEeeccC
Confidence 344444444 89999998754322 567888 4799999998 443 333333
Q ss_pred CCCCCCCCCC-HHHHHHHHHHHhc
Q 023016 186 GSESIDEEDQ-GSQISRFLEGYRE 208 (288)
Q Consensus 186 ~~~~~~~e~t-~e~I~~Fl~~fl~ 208 (288)
..+ .+++.+|++..++
T Consensus 150 -------~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 150 -------YDEDISKYINFLQTGLE 166 (172)
T ss_dssp -------SCCCHHHHHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHH
Confidence 345 8888888877654
No 259
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=86.00 E-value=1.9 Score=33.37 Aligned_cols=65 Identities=8% Similarity=0.197 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHH
Q 023016 126 KSQKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFL 203 (288)
Q Consensus 126 ~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl 203 (288)
.=+..+..|+++|.++. +.|..+|.++.+..++.+|+ . +|.+++..+++.- ... .++.++|.+|+
T Consensus 42 ~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv---~-VP~l~~~~dG~~v-~~g-------~~~~~~L~~~L 106 (107)
T 2fgx_A 42 LCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYND---R-VPVLFAVNEDKEL-CHY-------FLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTT---S-CSEEEETTTTEEE-ECS-------SCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCC---C-CceEEEEECCEEE-Eec-------CCCHHHHHHHh
Confidence 34678888888888764 89999999988888888888 3 9998766544322 112 37788898887
No 260
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.46 E-value=0.14 Score=40.00 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=44.8
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccccHHHHhHcCCC------CCCeEEEEccCCCCcccccCCCCHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDFSEDTMVLYDFD------KVPALVALQPSYNEHNIFYGPFDEEFLEEFIK 89 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~seel~~~y~~~------~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~ 89 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++. ..|++++|+.. .....+.|..+.+.|.+||.
T Consensus 42 ~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 42 QSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGG-KEAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp TTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSS-SEEEEESCBCSSSCBCCCCC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECC-EEEEEecCcCchHHHHHHHh
Confidence 344555555544443 5777777777788999999998 99999999732 22223566665555555554
No 261
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=85.46 E-value=2.5 Score=32.79 Aligned_cols=77 Identities=13% Similarity=0.258 Sum_probs=52.7
Q ss_pred hhhHHHHHHhhcccchhHHhhhc--ceeeEeeecccc----------------------HHHHhHcCCCCCCeEEEEccC
Q 023016 13 QNCLSVILRNLLPLMSPFLIQMR--KFLTLLKMLDFS----------------------EDTMVLYDFDKVPALVALQPS 68 (288)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--k~~~v~~~~~~s----------------------eel~~~y~~~~~PsIvlfk~~ 68 (288)
..|- ..+..+|.+..+....+ ++..+++..+-+ .++...|++...|+++++.+.
T Consensus 36 ~~C~--~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~ 113 (151)
T 2f9s_A 36 TWCE--PCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPE 113 (151)
T ss_dssp TTCH--HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTT
T ss_pred CCCH--HHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCC
Confidence 3563 34556677766665543 477777766543 478889999999999999543
Q ss_pred CCCcccccCCCCHHHHHHHHHHc
Q 023016 69 YNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 69 dee~~~f~g~f~~~~L~~FI~~n 91 (288)
..-...+.|..+.+.|.++|+..
T Consensus 114 G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 114 GKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp SEEEEEEESCCCHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCHHHHHHHHHHH
Confidence 22223456878899999999875
No 262
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=85.30 E-value=2.6 Score=32.64 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=35.2
Q ss_pred cccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 45 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 45 ~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+...+++..|++...|+++++.+...-...+.|..+.+.|.++|+..
T Consensus 93 d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 93 DADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp CSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred CchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 34567899999999999999965332233467878888899998763
No 263
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=84.47 E-value=3.1 Score=32.51 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=49.1
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccccHHHHhHc---------------------------CCCCCCeEEEEccCCCC
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDFSEDTMVLY---------------------------DFDKVPALVALQPSYNE 71 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~seel~~~y---------------------------~~~~~PsIvlfk~~dee 71 (288)
+..+|.+..+.-..+ ++..+++..+-+.+.+..| ++...|+++++.+...-
T Consensus 50 ~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i 129 (165)
T 3or5_A 50 RSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNV 129 (165)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBE
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcE
Confidence 445666666655443 4888888777766666666 88899999999643222
Q ss_pred cccccCCCCHHHHHHHHHHc
Q 023016 72 HNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 72 ~~~f~g~f~~~~L~~FI~~n 91 (288)
...+.|..+.+.|.++|+..
T Consensus 130 ~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 130 SGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp EEEECSCCCHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHH
Confidence 23466888889999999875
No 264
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=84.38 E-value=1.4 Score=35.03 Aligned_cols=69 Identities=9% Similarity=0.066 Sum_probs=46.8
Q ss_pred HhhcccchhHHhhh-cceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcc----------cccCCCC-HHHHHHHH
Q 023016 21 RNLLPLMSPFLIQM-RKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHN----------IFYGPFD-EEFLEEFI 88 (288)
Q Consensus 21 ~~~~~~~~~~~~~~-~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~----------~f~g~f~-~~~L~~FI 88 (288)
+.+.|.+..+.... .++..+.+-.+-..+++..|++.+.|++++|++ ++.. ...|..+ .+.|.++|
T Consensus 39 ~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~--G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i 116 (142)
T 1qgv_A 39 MKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFR--NKHIMIDLGTGNNNKINWAMEDKQEMVDII 116 (142)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEET--TEEEEEECC------CCSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEEC--CcEEEEecCCCCcceeeeecCcHHHHHHHH
Confidence 44556666555444 357777777777788999999999999999974 2222 1334443 77888888
Q ss_pred HHc
Q 023016 89 KQN 91 (288)
Q Consensus 89 ~~n 91 (288)
+..
T Consensus 117 ~~~ 119 (142)
T 1qgv_A 117 ETV 119 (142)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 265
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=83.90 E-value=8.5 Score=35.70 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=56.6
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCc---------------------------hhHHhhcC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF---------------------------ADFADTFE 162 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~---------------------------~~~le~fG 162 (288)
+.++++.|.. .-..-......+.+++++|++ +.|+.|+.+++ ..+.+.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 3444444443 223345677888899998876 88888865321 23456677
Q ss_pred CCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 163 ANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 163 L~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+ ..+|++++.| ++. .+.+.+ ..+.+++.++++..++.
T Consensus 162 V---~~~Pt~~lID~~G~Iv~~~~G-------~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 162 N---RYWPAEYLIDATGTVRHIKFG-------EGDYNVTETLVRQLLND 200 (352)
T ss_dssp C---CEESEEEEECTTSBEEEEEES-------BCCHHHHHHHHHHHHHH
T ss_pred C---CccCEEEEEeCCCeEEEEEcC-------CCCHHHHHHHHHHHHhh
Confidence 7 4679999888 443 444433 36789999999998754
No 266
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=83.66 E-value=3.4 Score=32.14 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=49.6
Q ss_pred HHhhcccchhHHhh--hcceeeEeeeccc------------------------cHHHHhHcC--CCCCCeEEEEccCCCC
Q 023016 20 LRNLLPLMSPFLIQ--MRKFLTLLKMLDF------------------------SEDTMVLYD--FDKVPALVALQPSYNE 71 (288)
Q Consensus 20 ~~~~~~~~~~~~~~--~~k~~~v~~~~~~------------------------seel~~~y~--~~~~PsIvlfk~~dee 71 (288)
.+..+|.+..+... .+++..+++..+. ..+++..|+ +...|+++++.+...-
T Consensus 39 C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i 118 (151)
T 3raz_A 39 CRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGY 118 (151)
T ss_dssp HHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTE
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcE
Confidence 34456666665544 3567888777652 345677888 8889999999653322
Q ss_pred cccccCCCCHHHHHHHHHHc
Q 023016 72 HNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 72 ~~~f~g~f~~~~L~~FI~~n 91 (288)
...+.|..+.+.|.++|+.-
T Consensus 119 ~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 119 RQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp EEECCSCCCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 34567888999999999863
No 267
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=83.29 E-value=7.7 Score=30.37 Aligned_cols=67 Identities=12% Similarity=0.122 Sum_probs=42.7
Q ss_pred cEEEEEEccC-hhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCchh-----------------------HHhhcCCCCCC
Q 023016 114 IVLAIVEDET-EEKSQKLVTTLKAAASANRE--LVFCYVGIKQFAD-----------------------FADTFEANKKS 167 (288)
Q Consensus 114 ~~l~~lf~~~-~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~~~-----------------------~le~fGL~k~~ 167 (288)
.++++.|..+ -..-......+.+++++|++ +.++.++.+.... +.+.||+ .
T Consensus 36 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v---~ 112 (152)
T 2lrt_A 36 KVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV---T 112 (152)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC---C
T ss_pred CEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc---c
Confidence 3444444432 23345667788888888876 7888887664332 5667787 4
Q ss_pred CCCeEEEEe-CCc-eeec
Q 023016 168 KLPKMVVWD-GNE-NYLT 183 (288)
Q Consensus 168 ~lPai~I~d-~~~-KY~~ 183 (288)
.+|++++.| ++. .+..
T Consensus 113 ~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSARG 130 (152)
T ss_dssp SCSEEEEEETTTEEEEET
T ss_pred cCceEEEECCCCeEEEec
Confidence 689999998 443 4443
No 268
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=83.06 E-value=8.1 Score=29.55 Aligned_cols=79 Identities=8% Similarity=0.064 Sum_probs=47.8
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC--cEEEEEeCcCc--------------------------hhHHhhcCCC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANRE--LVFCYVGIKQF--------------------------ADFADTFEAN 164 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~--------------------------~~~le~fGL~ 164 (288)
.++++.|.. .-..-......+.+++++|++ +.|+.++.+.. ..+.+.||+
T Consensus 33 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v- 111 (143)
T 4fo5_A 33 RYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL- 111 (143)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG-
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC-
Confidence 444444443 223356677888999999975 77777755521 123455666
Q ss_pred CCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHH
Q 023016 165 KKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEG 205 (288)
Q Consensus 165 k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~ 205 (288)
..+|+.++.+ ++. .+. ..+.+++.++++.
T Consensus 112 --~~~P~~~lid~~G~i~~~----------~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 112 --RKGFKNFLINDEGVIIAA----------NVTPEKLTEILKA 142 (143)
T ss_dssp --GGCCCEEEECTTSBEEEE----------SCCHHHHHHHHTC
T ss_pred --CCCCcEEEECCCCEEEEc----------cCCHHHHHHHHHh
Confidence 3579888888 443 222 2467888877753
No 269
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=82.89 E-value=3.1 Score=33.36 Aligned_cols=41 Identities=17% Similarity=0.141 Sum_probs=31.0
Q ss_pred HhHcCCCCCCeEEEEccCCCCcccccCCCC-HHHHHHHHHHc
Q 023016 51 MVLYDFDKVPALVALQPSYNEHNIFYGPFD-EEFLEEFIKQN 91 (288)
Q Consensus 51 ~~~y~~~~~PsIvlfk~~dee~~~f~g~f~-~~~L~~FI~~n 91 (288)
+..|++.+.|+++++.+.......+.|..+ .+.+.+||+..
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 788999999999999653333334568777 88999998763
No 270
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=82.15 E-value=3.9 Score=31.53 Aligned_cols=72 Identities=22% Similarity=0.251 Sum_probs=46.2
Q ss_pred HhhcccchhHHhhhcc--eeeEeeeccccH----------------------HHHhHcCCCCCCeEEEEccCCCCccccc
Q 023016 21 RNLLPLMSPFLIQMRK--FLTLLKMLDFSE----------------------DTMVLYDFDKVPALVALQPSYNEHNIFY 76 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k--~~~v~~~~~~se----------------------el~~~y~~~~~PsIvlfk~~dee~~~f~ 76 (288)
+..+|.+..+.-..+. +..+++..+-+. ++...|++...|+++++.+...-...+.
T Consensus 44 ~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 123 (152)
T 3gl3_A 44 RQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHV 123 (152)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEE
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEc
Confidence 4455555555544433 677776655443 6778899999999999964322222345
Q ss_pred CC--CCHHHHHHHHHHcC
Q 023016 77 GP--FDEEFLEEFIKQNF 92 (288)
Q Consensus 77 g~--f~~~~L~~FI~~ns 92 (288)
|. .+.+.|.++|+...
T Consensus 124 g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 124 GFRPADKEALEQQILAAL 141 (152)
T ss_dssp SCCTTTHHHHHHHHHHHT
T ss_pred cCCCcCHHHHHHHHHHHH
Confidence 53 45689999998863
No 271
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=81.83 E-value=14 Score=28.32 Aligned_cols=61 Identities=7% Similarity=0.131 Sum_probs=39.9
Q ss_pred CcEEEEEEccC-hhhHHHHHHHHHHHHHhcC--C-cEEEEEeCcC------------------------chhHHhhcCCC
Q 023016 113 KIVLAIVEDET-EEKSQKLVTTLKAAASANR--E-LVFCYVGIKQ------------------------FADFADTFEAN 164 (288)
Q Consensus 113 ~~~l~~lf~~~-~e~~e~~~~~l~~vAk~~r--g-l~Fv~VD~~~------------------------~~~~le~fGL~ 164 (288)
+.++++.|..+ -..-......+.+++++++ + +.++.++.+. ...+.+.||+
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v- 106 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV- 106 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC-
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC-
Confidence 34444444432 2334567788889999887 3 7777776553 1345677888
Q ss_pred CCCCCCeEEEEe
Q 023016 165 KKSKLPKMVVWD 176 (288)
Q Consensus 165 k~~~lPai~I~d 176 (288)
..+|++++.+
T Consensus 107 --~~~Pt~~lid 116 (146)
T 1o8x_A 107 --ESIPTLIGVD 116 (146)
T ss_dssp --CSSSEEEEEE
T ss_pred --CCCCEEEEEE
Confidence 4689999998
No 272
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=81.80 E-value=2.2 Score=31.44 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 128 QKLVTTLKAAASANRELVFCYVGIKQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 128 e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
...+..|++++..+ |..+|.++.+...+.+|+ . +|.+++ .+++.. . + .++.++|.++++.++
T Consensus 15 ~~~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~---~-vPtl~~-~~G~~v-~-g-------~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 15 DQAVEALAQARAGA----FFSVFIDDDAALESAYGL---R-VPVLRD-PMGREL-D-W-------PFDAPRLRAWLDAAP 76 (87)
T ss_dssp HHHHHHHHHTTCCC----EEEEECTTCHHHHHHHTT---T-CSEEEC-TTCCEE-E-S-------CCCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhh----eEEEECCCCHHHHHHhCC---C-cCeEEE-ECCEEE-e-C-------CCCHHHHHHHHHHHH
Confidence 45556666655433 788999988888888888 4 899886 433322 1 2 378999999998766
Q ss_pred cCc
Q 023016 208 EGR 210 (288)
Q Consensus 208 ~Gk 210 (288)
+..
T Consensus 77 ~~~ 79 (87)
T 1ttz_A 77 HAL 79 (87)
T ss_dssp ---
T ss_pred HHH
Confidence 543
No 273
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=81.32 E-value=2 Score=32.50 Aligned_cols=40 Identities=10% Similarity=-0.013 Sum_probs=32.0
Q ss_pred ccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 46 FSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 46 ~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
-..+++..|++.+.|++++ +++ .|.|..+.+.|.+|+.-.
T Consensus 54 ~~~~l~~~~~V~~~PT~~i----~G~--~~~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 54 PQAQECTEAGITSYPTWII----NGR--TYTGVRSLEALAVASGYP 93 (106)
T ss_dssp CCCHHHHHTTCCSSSEEEE----TTE--EEESCCCHHHHHHHHTCC
T ss_pred hhHHHHHHcCCeEeCEEEE----CCE--EecCCCCHHHHHHHhCCc
Confidence 3578999999999999777 222 388999999999998543
No 274
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=81.28 E-value=14 Score=28.10 Aligned_cols=62 Identities=10% Similarity=0.106 Sum_probs=40.5
Q ss_pred cEEEEEEcc-ChhhHHHHHHHHHHHHHhcC--C-cEEEEEeCcC------------------------chhHHhhcCCCC
Q 023016 114 IVLAIVEDE-TEEKSQKLVTTLKAAASANR--E-LVFCYVGIKQ------------------------FADFADTFEANK 165 (288)
Q Consensus 114 ~~l~~lf~~-~~e~~e~~~~~l~~vAk~~r--g-l~Fv~VD~~~------------------------~~~~le~fGL~k 165 (288)
.++++.|.. .-..-......+.+++++++ + +.++.++.+. ...+.+.||+
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-- 106 (144)
T 1i5g_A 29 KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV-- 106 (144)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC--
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC--
Confidence 344444443 22344667788889999887 3 7777776553 1345677888
Q ss_pred CCCCCeEEEEe-CC
Q 023016 166 KSKLPKMVVWD-GN 178 (288)
Q Consensus 166 ~~~lPai~I~d-~~ 178 (288)
..+|++++.+ .+
T Consensus 107 -~~~P~~~lid~~~ 119 (144)
T 1i5g_A 107 -KSIPTLVGVEADS 119 (144)
T ss_dssp -CSSSEEEEEETTT
T ss_pred -CCCCEEEEEECCC
Confidence 4689999998 44
No 275
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=81.06 E-value=1.9 Score=36.07 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=49.0
Q ss_pred HhhcccchhHHhhhc-ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcc----------cccCCCC-HHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMR-KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHN----------IFYGPFD-EEFLEEFI 88 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~-k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~----------~f~g~f~-~~~L~~FI 88 (288)
|.+-|.+..+--... ++..+-+-.|-..++.+.|++...||+++|++ ++.. ...|... ++.|.++|
T Consensus 57 k~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~--G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~i 134 (160)
T 2av4_A 57 MKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYR--NKHMMIDLGTGNNNKINWPMNNKQEFIDIV 134 (160)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEET--TEEEEEECSSSCCSCBCSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEEC--CEEEEEecCCCCcCeEEeecCCHHHHHHHH
Confidence 445566666555553 35555566677789999999999999999985 3343 3456555 88899998
Q ss_pred HHc
Q 023016 89 KQN 91 (288)
Q Consensus 89 ~~n 91 (288)
+..
T Consensus 135 e~~ 137 (160)
T 2av4_A 135 ETI 137 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 276
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=80.96 E-value=2.1 Score=33.09 Aligned_cols=48 Identities=21% Similarity=0.314 Sum_probs=35.7
Q ss_pred eeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHH
Q 023016 37 FLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFI 88 (288)
Q Consensus 37 ~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI 88 (288)
+...-+-.+-+.+++..|++. .|+|++|+. + ...+.|.++.+.|.+||
T Consensus 59 i~~~~vDId~d~~l~~~ygv~-VP~l~~~~d--G-~~v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 59 FELEVINIDGNEHLTRLYNDR-VPVLFAVNE--D-KELCHYFLDSDVIGAYL 106 (107)
T ss_dssp CCCEEEETTTCHHHHHHSTTS-CSEEEETTT--T-EEEECSSCCCHHHHHHH
T ss_pred CeEEEEECCCCHHHHHHhCCC-CceEEEEEC--C-EEEEecCCCHHHHHHHh
Confidence 333334455568899999997 999999973 3 33456889999999997
No 277
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=79.93 E-value=13 Score=29.57 Aligned_cols=61 Identities=3% Similarity=0.058 Sum_probs=40.5
Q ss_pred CcEEEEEEcc-ChhhHHHHHHHHHHHHHhcCC---cEEEEEeCcCc------------------------hhHHhhcCCC
Q 023016 113 KIVLAIVEDE-TEEKSQKLVTTLKAAASANRE---LVFCYVGIKQF------------------------ADFADTFEAN 164 (288)
Q Consensus 113 ~~~l~~lf~~-~~e~~e~~~~~l~~vAk~~rg---l~Fv~VD~~~~------------------------~~~le~fGL~ 164 (288)
+.++++.|.. --..-......+.++++++++ +.++.|+.+.. ..+.+.||+
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v- 126 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV- 126 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC-
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC-
Confidence 3444444443 223456777888899998873 66666665433 456778888
Q ss_pred CCCCCCeEEEEe
Q 023016 165 KKSKLPKMVVWD 176 (288)
Q Consensus 165 k~~~lPai~I~d 176 (288)
..+|++++.+
T Consensus 127 --~~~Pt~~lid 136 (165)
T 3s9f_A 127 --ESIPTLIGLN 136 (165)
T ss_dssp --CSSSEEEEEE
T ss_pred --CCCCEEEEEe
Confidence 4789999999
No 278
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=80.66 E-value=0.38 Score=36.82 Aligned_cols=55 Identities=15% Similarity=0.177 Sum_probs=38.0
Q ss_pred eeeEeeec--cccHHHHhHcCCCCCCeEEEEccCCCC---cccccCCCCHHHHHHHHHHc
Q 023016 37 FLTLLKML--DFSEDTMVLYDFDKVPALVALQPSYNE---HNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 37 ~~~v~~~~--~~seel~~~y~~~~~PsIvlfk~~dee---~~~f~g~f~~~~L~~FI~~n 91 (288)
+..+.+-. +-..+++..|++.+.|++++|.+.+++ ...+.|..+.+.|.+||+..
T Consensus 55 ~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 55 FVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 44444443 334678999999999999999543333 23467777778888888764
No 279
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=79.30 E-value=18 Score=27.30 Aligned_cols=60 Identities=7% Similarity=0.194 Sum_probs=39.0
Q ss_pred cEEEEEEccC-hhhHHHHHHHHHHHHHhcC--C-cEEEEEeCcC------------------------chhHHhhcCCCC
Q 023016 114 IVLAIVEDET-EEKSQKLVTTLKAAASANR--E-LVFCYVGIKQ------------------------FADFADTFEANK 165 (288)
Q Consensus 114 ~~l~~lf~~~-~e~~e~~~~~l~~vAk~~r--g-l~Fv~VD~~~------------------------~~~~le~fGL~k 165 (288)
.++++.|..+ -..-......+.+++++++ + +.++.++.+. ...+.+.||+
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-- 106 (144)
T 1o73_A 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV-- 106 (144)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC--
T ss_pred CEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC--
Confidence 3444444432 2334567778888999887 3 6666666553 1245677788
Q ss_pred CCCCCeEEEEe
Q 023016 166 KSKLPKMVVWD 176 (288)
Q Consensus 166 ~~~lPai~I~d 176 (288)
..+|++++.+
T Consensus 107 -~~~Pt~~lid 116 (144)
T 1o73_A 107 -ESIPTLITIN 116 (144)
T ss_dssp -CSSSEEEEEE
T ss_pred -CCCCEEEEEE
Confidence 4689999998
No 280
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=78.56 E-value=0.78 Score=39.62 Aligned_cols=68 Identities=12% Similarity=0.035 Sum_probs=42.8
Q ss_pred hcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccC-------CCCHHHHHHHHHHcC
Q 023016 23 LLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG-------PFDEEFLEEFIKQNF 92 (288)
Q Consensus 23 ~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g-------~f~~~~L~~FI~~ns 92 (288)
+.|.+..+-....++..+.+-.+ ..+++..|++...|++++|+... ....+.| +++.+.|+.||..+.
T Consensus 138 l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 138 LNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp HHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 34444443333334555555555 56788899999999999998421 1122334 345689999998764
No 281
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=78.42 E-value=4.3 Score=31.55 Aligned_cols=42 Identities=17% Similarity=0.305 Sum_probs=32.0
Q ss_pred HHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 50 TMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 50 l~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+...|++...|+.+++.+...-...+.|..+.+.|.++|+.-
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 153 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSL 153 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHH
Confidence 888999999999999975322223456888888899888753
No 282
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=77.98 E-value=2.8 Score=31.14 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=34.5
Q ss_pred cccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 45 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 45 ~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
+-+.++...|++.+.|+++++.+...-...+.|..+.+.|.++|+.
T Consensus 91 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 91 DPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 3346788999999999999996432222346788889999999875
No 283
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=77.81 E-value=4.1 Score=31.66 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=41.3
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCC-------CCHHHHHHHHHHcC
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGP-------FDEEFLEEFIKQNF 92 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~-------f~~~~L~~FI~~ns 92 (288)
+.+.|.+..+.....++..+.+-.+- ....|++...|++++|+.. .....+.|. ++.+.|++||....
T Consensus 46 ~~~~p~l~~la~~~~~v~~~~vd~~~---~~~~~~i~~~Pt~~~~~~G-~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 46 LVVNQHLSVLARKFPETKFVKAIVNS---CIEHYHDNCLPTIFVYKNG-QIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECCSS---SCSSCCSSCCSEEEEESSS-SCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEhhc---CcccCCCCCCCEEEEEECC-EEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 44556555544444444444333332 2378999999999999842 222233342 47889999999874
No 284
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=76.90 E-value=4.7 Score=31.61 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=52.8
Q ss_pred hhhHHHHHHhhcccchhHHhhhc--ceeeEeeeccc-------------------cHHHHhHcCCCCCCeEEEEccCCCC
Q 023016 13 QNCLSVILRNLLPLMSPFLIQMR--KFLTLLKMLDF-------------------SEDTMVLYDFDKVPALVALQPSYNE 71 (288)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--k~~~v~~~~~~-------------------seel~~~y~~~~~PsIvlfk~~dee 71 (288)
..|-. .+..+|.+..+....+ ++..+++..+- ..++...|++...|+++++-+...-
T Consensus 51 ~~C~~--C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 128 (158)
T 3hdc_A 51 SWCPY--CRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGII 128 (158)
T ss_dssp TTCHH--HHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBE
T ss_pred CcCHH--HHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEcCCCCE
Confidence 34542 3456666677666654 77777776655 5689999999999998888653222
Q ss_pred cccccCC--CCHHHHHHHHHHcCCC
Q 023016 72 HNIFYGP--FDEEFLEEFIKQNFLP 94 (288)
Q Consensus 72 ~~~f~g~--f~~~~L~~FI~~nslP 94 (288)
...+.|. .+..++.+.+..++-|
T Consensus 129 ~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 129 RQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEEESCCCTTSHHHHHHHHTTC--
T ss_pred EEEEeCCCccchHHHHHHHHhhccc
Confidence 2335553 5677788888887665
No 285
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=76.48 E-value=0.78 Score=44.76 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=42.0
Q ss_pred HhhcccchhHHhhhc---------ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCC-CcccccCC
Q 023016 21 RNLLPLMSPFLIQMR---------KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYN-EHNIFYGP 78 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~---------k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~de-e~~~f~g~ 78 (288)
+.+.|.+..+....+ ++..+.+-.+-..+++..|++.+.|++++|++... ....|.|.
T Consensus 58 k~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~ 125 (470)
T 3qcp_A 58 RRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRDSCRSNEECGT 125 (470)
T ss_dssp HHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESSCCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCCceEEEEeeCC
Confidence 556677766665544 46777777777899999999999999999986432 23456664
No 286
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=76.28 E-value=9.1 Score=31.35 Aligned_cols=54 Identities=9% Similarity=0.155 Sum_probs=30.5
Q ss_pred hHHhhcCCCCC---CCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 156 DFADTFEANKK---SKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 156 ~~le~fGL~k~---~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
.+.+.||+ .. ...|++++.+ ++. .|...+.. ..+-+.++|.+.++....|...|
T Consensus 117 ~~~~~~~v-~~~~g~~~P~~~lid~~G~i~~~~~g~~---~~~~~~~~l~~~l~~l~~~~~~p 175 (195)
T 2bmx_A 117 ELSQAAGV-LNADGVADRVTFIVDPNNEIQFVSATAG---SVGRNVDEVLRVLDALQSDELCA 175 (195)
T ss_dssp HHHHHHTC-BCTTSSBCEEEEEECTTSBEEEEEEECT---TCCCCHHHHHHHHHHHHC-----
T ss_pred HHHHHhCC-cccCCCccceEEEEcCCCeEEEEEecCC---CCCCCHHHHHHHHHHHhhCCCcC
Confidence 34566777 21 0579999998 443 34332200 11237899999999999877654
No 287
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=75.41 E-value=6.2 Score=30.98 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=49.5
Q ss_pred HhhcccchhHHhhhcceeeEeeecc------------------cc----------------------HHHHhHcCCCCCC
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLD------------------FS----------------------EDTMVLYDFDKVP 60 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~------------------~s----------------------eel~~~y~~~~~P 60 (288)
+..+|.+..+.-..+++..+++..+ -+ .+++..|++...|
T Consensus 53 ~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P 132 (165)
T 3ha9_A 53 VYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSID 132 (165)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSS
T ss_pred hhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCce
Confidence 4456777776666667888877665 23 3788889999999
Q ss_pred eEEEEccCCCCcccccCCC-CHHHHHHHHHHc
Q 023016 61 ALVALQPSYNEHNIFYGPF-DEEFLEEFIKQN 91 (288)
Q Consensus 61 sIvlfk~~dee~~~f~g~f-~~~~L~~FI~~n 91 (288)
+++++.+. ....+.|.. +.+.|.++|+.-
T Consensus 133 ~~~lid~~--G~i~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 133 YIVIMDKS--SNVLYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEEEEETT--CCEEEEEESCCHHHHHHHHHHC
T ss_pred EEEEEcCC--CcEEEeCCCCCHHHHHHHHHHH
Confidence 99999642 333347777 888999998763
No 288
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=75.08 E-value=3.9 Score=32.33 Aligned_cols=74 Identities=14% Similarity=0.013 Sum_probs=46.8
Q ss_pred hhhHHHHHHhhcccchhHHhhhcceeeEeee-----------------------ccccHHHHhHcCCCCCCeEEEEccCC
Q 023016 13 QNCLSVILRNLLPLMSPFLIQMRKFLTLLKM-----------------------LDFSEDTMVLYDFDKVPALVALQPSY 69 (288)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~k~~~v~~~-----------------------~~~seel~~~y~~~~~PsIvlfk~~d 69 (288)
..|-. .+..+|.+..+... ++..+++. .+-..++...|++...|+.+++.+..
T Consensus 61 ~~C~~--C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G 136 (168)
T 2b1k_A 61 TWCPT--CRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNG 136 (168)
T ss_dssp TTCHH--HHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTS
T ss_pred CCCHH--HHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccCEEEEECCCC
Confidence 34543 34566777776554 56666665 34445788889999999766665322
Q ss_pred CCcccccCCCCHHHHHHHHHH
Q 023016 70 NEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 70 ee~~~f~g~f~~~~L~~FI~~ 90 (288)
.-...+.|..+.+.|.++|+.
T Consensus 137 ~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 137 IIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp BEEEEEESCCCHHHHHHTTHH
T ss_pred eEEEEEeCCCCHHHHHHHHHH
Confidence 222235677788888877765
No 289
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=74.28 E-value=4.9 Score=30.97 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=47.3
Q ss_pred hhHHHHHHhhcccchhHHhhhcceeeEeeec-----------------------cccHHHHhHcCCCCCCeEEEEccCCC
Q 023016 14 NCLSVILRNLLPLMSPFLIQMRKFLTLLKML-----------------------DFSEDTMVLYDFDKVPALVALQPSYN 70 (288)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~k~~~v~~~~-----------------------~~seel~~~y~~~~~PsIvlfk~~de 70 (288)
.|-. .+..+|.+..+... .++..+++.. +-..++...|++...|+++++-+...
T Consensus 53 ~C~~--C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~ 129 (156)
T 1kng_A 53 WCVP--CHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGT 129 (156)
T ss_dssp TCHH--HHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSB
T ss_pred cCHh--HHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeEEEEcCCCC
Confidence 4543 24456666665544 4577776653 33457788899999998777754222
Q ss_pred CcccccCCCCHHHHHHHHHH
Q 023016 71 EHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 71 e~~~f~g~f~~~~L~~FI~~ 90 (288)
-...+.|..+.+.|.++|+.
T Consensus 130 i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 130 IVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp EEEEEESCCCHHHHHHTHHH
T ss_pred EEEEEeCCCCHHHHHHHHHH
Confidence 22336787788888888865
No 290
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=73.81 E-value=7.4 Score=28.50 Aligned_cols=44 Identities=20% Similarity=0.316 Sum_probs=33.3
Q ss_pred eeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 42 KMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 42 ~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+-.+-+.++++.|+++ .|+|++ + +++. .+ |.++.+.|.+||...
T Consensus 32 vdid~~~~l~~~~g~~-vPtl~~-~--~G~~-v~-g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 32 VFIDDDAALESAYGLR-VPVLRD-P--MGRE-LD-WPFDAPRLRAWLDAA 75 (87)
T ss_dssp EECTTCHHHHHHHTTT-CSEEEC-T--TCCE-EE-SCCCHHHHHHHHHTC
T ss_pred EECCCCHHHHHHhCCC-cCeEEE-E--CCEE-Ee-CCCCHHHHHHHHHHH
Confidence 3445568899999998 999887 5 3333 33 889999999999764
No 291
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=73.75 E-value=6.5 Score=30.46 Aligned_cols=43 Identities=21% Similarity=0.308 Sum_probs=31.9
Q ss_pred HHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 49 DTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 49 el~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+++..|++...|+.+++.+...-...+.|..+.+.|.++|+.-
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATL 150 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 5889999999999999964322223456888888888888763
No 292
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=73.09 E-value=9.5 Score=26.39 Aligned_cols=67 Identities=9% Similarity=0.175 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEeCcCc----hhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHH
Q 023016 125 EKSQKLVTTLKAAASANRELVFCYVGIKQF----ADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQIS 200 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~~----~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~ 200 (288)
..-...+..|++++.+++++.|..+|.+.. +.+.+.+|. .-..+|.+.+ ++ ++. . . .++|.
T Consensus 12 ~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~-~~~~vP~i~~--~g-~~i--~-------~--~~~l~ 76 (85)
T 1ego_A 12 PYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGK-PVETVPQIFV--DQ-QHI--G-------G--YTDFA 76 (85)
T ss_dssp THHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCC-CSCCSCEEEE--TT-EEE--E-------S--SHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCC-CCceeCeEEE--CC-EEE--E-------C--HHHHH
Confidence 345678888999999888888999987643 255667772 1257999854 33 321 2 1 25788
Q ss_pred HHHHHH
Q 023016 201 RFLEGY 206 (288)
Q Consensus 201 ~Fl~~f 206 (288)
++++.-
T Consensus 77 ~~~~~~ 82 (85)
T 1ego_A 77 AWVKEN 82 (85)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777763
No 293
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=72.65 E-value=11 Score=28.51 Aligned_cols=67 Identities=18% Similarity=0.196 Sum_probs=44.9
Q ss_pred HhhcccchhHHhhh---cceeeEeeecccc-------------------------HHHHhHcCCCCCCeEEEEccCCCCc
Q 023016 21 RNLLPLMSPFLIQM---RKFLTLLKMLDFS-------------------------EDTMVLYDFDKVPALVALQPSYNEH 72 (288)
Q Consensus 21 ~~~~~~~~~~~~~~---~k~~~v~~~~~~s-------------------------eel~~~y~~~~~PsIvlfk~~dee~ 72 (288)
+..+|.+..+.-.. +++..+++..+-+ .+++..|++...|+++++.+. ..
T Consensus 49 ~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~--G~ 126 (148)
T 3fkf_A 49 PEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPT--GK 126 (148)
T ss_dssp HHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTT--SB
T ss_pred HHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCC--Ce
Confidence 34556666665544 3477777766653 478999999999999999542 23
Q ss_pred ccccCCCCHHHHHHHHHH
Q 023016 73 NIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 73 ~~f~g~f~~~~L~~FI~~ 90 (288)
..+... +.+.|.++|+.
T Consensus 127 i~~~~~-~~~~l~~~l~~ 143 (148)
T 3fkf_A 127 ILARDI-QGEALTGKLKE 143 (148)
T ss_dssp EEEESC-CHHHHHHHHHH
T ss_pred EEEecC-CHHHHHHHHHH
Confidence 333322 77788888875
No 294
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=72.60 E-value=22 Score=27.83 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeCc---------------------CchhHHhhcCCCCC--CCCCeEEEEe-CCc-
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGIK---------------------QFADFADTFEANKK--SKLPKMVVWD-GNE- 179 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~~---------------------~~~~~le~fGL~k~--~~lPai~I~d-~~~- 179 (288)
-......|.+++++|++ +.|+.|+.+ ....+.+.||+ .. ...|+.++.| ++.
T Consensus 45 C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v-~~~~~~~P~~~lid~~G~i 123 (161)
T 3drn_A 45 STREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGA-KGFILPARITFVIDKKGII 123 (161)
T ss_dssp HHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC-CCSSSCCCEEEEECTTSBE
T ss_pred hHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCC-CCcCcccceEEEECCCCEE
Confidence 34566677777777765 666666554 22345677887 31 1289999998 443
Q ss_pred eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 180 NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 180 KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
.|.+.+. ...+-..+++.+.++....
T Consensus 124 ~~~~~g~---~~~~~~~~~il~~l~~l~~ 149 (161)
T 3drn_A 124 RHIYNSQ---MNPANHVNEALKALKQIKE 149 (161)
T ss_dssp EEEEECS---SCTTHHHHHHHHHHHHHHH
T ss_pred EEEEecC---CCCCcCHHHHHHHHHHhhh
Confidence 3433220 0112345566666666543
No 295
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=72.26 E-value=32 Score=26.70 Aligned_cols=31 Identities=10% Similarity=-0.052 Sum_probs=20.8
Q ss_pred eEEEEe-CC-ceeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 171 KMVVWD-GN-ENYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 171 ai~I~d-~~-~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+.++.+ ++ -.+.+.+ ..+.++|.+.++..++
T Consensus 132 ~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 132 AIYLLNPDGLFTDYYGR-------SRSAEQISDSVRRHMA 164 (171)
T ss_dssp EEEEECTTSCEEEEEES-------SCCHHHHHHHHHHHHH
T ss_pred eEEEECCCCeEEEEECC-------CCCHHHHHHHHHHHHH
Confidence 778887 33 2444433 4678889988888765
No 296
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=71.12 E-value=14 Score=27.62 Aligned_cols=63 Identities=10% Similarity=0.019 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEeCc----CchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHH
Q 023016 125 EKSQKLVTTLKAAASANRELVFCYVGIK----QFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQIS 200 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rgl~Fv~VD~~----~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~ 200 (288)
..-..+...|.++|+.++ ++-+|.+ .+..+.+.||+ ..+|++++ ++..| .+ ..+.++|.
T Consensus 25 ~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~~l~~~~~V---~~~PT~~i--~G~~~--~G-------~~~~~~l~ 87 (106)
T 3kp8_A 25 PHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGI---TSYPTWII--NGRTY--TG-------VRSLEALA 87 (106)
T ss_dssp HHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCCHHHHHTTC---CSSSEEEE--TTEEE--ES-------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC---EEEEecccccchhHHHHHHcCC---eEeCEEEE--CCEEe--cC-------CCCHHHHH
Confidence 345677788888887664 4444432 45678889999 57999888 44444 33 46889999
Q ss_pred HHHH
Q 023016 201 RFLE 204 (288)
Q Consensus 201 ~Fl~ 204 (288)
+|+.
T Consensus 88 ~~~~ 91 (106)
T 3kp8_A 88 VASG 91 (106)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8873
No 297
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=71.00 E-value=11 Score=30.17 Aligned_cols=76 Identities=12% Similarity=0.066 Sum_probs=46.3
Q ss_pred hhhHHHHHHhhcccchhHHhhhcc--e------eeEeeeccc-cHHHHhHc-------------------------CCCC
Q 023016 13 QNCLSVILRNLLPLMSPFLIQMRK--F------LTLLKMLDF-SEDTMVLY-------------------------DFDK 58 (288)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~k--~------~~v~~~~~~-seel~~~y-------------------------~~~~ 58 (288)
..|-. .+..+|.+..+.-..++ + ..+++..+- +.+.+..| ++..
T Consensus 69 ~~C~~--C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 146 (183)
T 3lwa_A 69 QWCAP--CRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPASV 146 (183)
T ss_dssp TTCHH--HHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTTC
T ss_pred CcCHh--HHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCCCC
Confidence 34543 34456666665544433 5 778877776 55555554 5677
Q ss_pred CCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 59 VPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 59 ~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
.|+.+++.+...-...+.|..+.+.|.++|+.
T Consensus 147 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 147 IPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp CSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 89877775432222346677888888888875
No 298
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=71.00 E-value=4.2 Score=31.77 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=35.4
Q ss_pred cccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 45 DFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 45 ~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+-..+++..|++...|+++++.+...-...+.|..+.+.|.+||+..
T Consensus 108 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 108 DNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred cCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 33468899999999999999954322223456888899999999875
No 299
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=70.49 E-value=7 Score=29.60 Aligned_cols=47 Identities=15% Similarity=0.280 Sum_probs=33.1
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccccHH-------------------------HHhHcCCCCCCeEEEEcc
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDFSED-------------------------TMVLYDFDKVPALVALQP 67 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~see-------------------------l~~~y~~~~~PsIvlfk~ 67 (288)
+..+|.+..+.-..+ ++..+++..+-+.+ ++..|++...|+++++.+
T Consensus 47 ~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~ 120 (148)
T 3hcz_A 47 QQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDK 120 (148)
T ss_dssp CSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECT
T ss_pred HHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECC
Confidence 344555555544433 47888887776655 889999999999999964
No 300
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=68.44 E-value=3.3 Score=32.54 Aligned_cols=84 Identities=13% Similarity=0.082 Sum_probs=51.4
Q ss_pred hhhhhchhhHHH--HHHhhcccchhHHhh-hcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHH
Q 023016 7 IMDLEKQNCLSV--ILRNLLPLMSPFLIQ-MRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEF 83 (288)
Q Consensus 7 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~ 83 (288)
+++.+...|-.- +-+.++|.++.--.. .-.+..|-+-.+...++...|++.+.||+++|+. .++..-..|-...+.
T Consensus 22 LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~-G~ev~Ri~G~~~~~~ 100 (116)
T 3dml_A 22 LLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAG-DVESGRLEGYPGEDF 100 (116)
T ss_dssp EEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEET-TEEEEEEECCCCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEEC-CEEEeeecCCCCHHH
Confidence 455666666543 224455655431111 1233334444444467888899999999999993 233344678788899
Q ss_pred HHHHHHHc
Q 023016 84 LEEFIKQN 91 (288)
Q Consensus 84 L~~FI~~n 91 (288)
+..|+...
T Consensus 101 f~~~L~~~ 108 (116)
T 3dml_A 101 FWPMLARL 108 (116)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998763
No 301
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=67.53 E-value=18 Score=27.77 Aligned_cols=67 Identities=16% Similarity=0.163 Sum_probs=44.2
Q ss_pred HhhcccchhHHhhh---cceeeEeeeccccH-------------------------HHHhHcCCCCCCeEEEEccCCCCc
Q 023016 21 RNLLPLMSPFLIQM---RKFLTLLKMLDFSE-------------------------DTMVLYDFDKVPALVALQPSYNEH 72 (288)
Q Consensus 21 ~~~~~~~~~~~~~~---~k~~~v~~~~~~se-------------------------el~~~y~~~~~PsIvlfk~~dee~ 72 (288)
+..+|.+..+.-.. +.+..+++..+-+. ++...|++...|+.+++.+. ..
T Consensus 51 ~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~--G~ 128 (150)
T 3fw2_A 51 KQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSD--GK 128 (150)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTT--SB
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCC--CE
Confidence 34556666666544 55888888777553 78888999999999999542 23
Q ss_pred ccccCCCCHHHHHHHHHH
Q 023016 73 NIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 73 ~~f~g~f~~~~L~~FI~~ 90 (288)
..+.. .+.+.|.++|+.
T Consensus 129 i~~~~-~~~~~l~~~l~~ 145 (150)
T 3fw2_A 129 ILAKN-LRGEELKKKIEN 145 (150)
T ss_dssp EEEES-CCHHHHHHHHHH
T ss_pred EEEcc-CCHHHHHHHHHH
Confidence 33322 266677777654
No 302
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=67.31 E-value=10 Score=30.32 Aligned_cols=44 Identities=14% Similarity=0.167 Sum_probs=33.1
Q ss_pred HHHHhHcCCCC--CCeEEEEcc-CCCCccccc-CCCCHHHHHHHHHHc
Q 023016 48 EDTMVLYDFDK--VPALVALQP-SYNEHNIFY-GPFDEEFLEEFIKQN 91 (288)
Q Consensus 48 eel~~~y~~~~--~PsIvlfk~-~dee~~~f~-g~f~~~~L~~FI~~n 91 (288)
..++..++++. .|+|+++.. .+.....+. ++++.+.|++|++.-
T Consensus 78 ~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 78 QRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp HHHHHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 35788999985 799999874 333344444 789999999999885
No 303
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=66.78 E-value=11 Score=29.06 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=43.1
Q ss_pred HhhcccchhHHhhhc--ceeeEeeeccc-------------------------cHHHHhHcCCCCCCeEEEEccCCCCcc
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKMLDF-------------------------SEDTMVLYDFDKVPALVALQPSYNEHN 73 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~~~-------------------------seel~~~y~~~~~PsIvlfk~~dee~~ 73 (288)
+..+|.+..+....+ ++..+++..+- ..++...|++...|+++++.+. ...
T Consensus 45 ~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~--G~i 122 (152)
T 2lrn_A 45 RKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPE--GKI 122 (152)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTT--SEE
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCC--CeE
Confidence 445666666554433 47788777665 4678889999999999999542 233
Q ss_pred cccCCCCHHHHHHHHHH
Q 023016 74 IFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 74 ~f~g~f~~~~L~~FI~~ 90 (288)
.+.. ...+.|.++|+.
T Consensus 123 ~~~~-~~~~~l~~~l~~ 138 (152)
T 2lrn_A 123 VAKE-LRGDDLYNTVEK 138 (152)
T ss_dssp EEEC-CCTTHHHHHHHH
T ss_pred EEee-CCHHHHHHHHHH
Confidence 3221 244567777765
No 304
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=65.59 E-value=5.4 Score=30.89 Aligned_cols=42 Identities=17% Similarity=0.140 Sum_probs=30.0
Q ss_pred HHhHcCCCCCCeEEEEccCCCCcccccC-------CCCHHHHHHHHHHcC
Q 023016 50 TMVLYDFDKVPALVALQPSYNEHNIFYG-------PFDEEFLEEFIKQNF 92 (288)
Q Consensus 50 l~~~y~~~~~PsIvlfk~~dee~~~f~g-------~f~~~~L~~FI~~ns 92 (288)
....|++...|++++||+.. ....+.| .++.+.|+.|+....
T Consensus 65 ~~~~~~v~~~PT~~~fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 65 CIQHYHDNCLPTIFVYKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEVG 113 (118)
T ss_dssp TSTTCCGGGCSEEEEEETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTTT
T ss_pred hHHHCCCCCCCEEEEEECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHcC
Confidence 35889999999999999532 1111222 578999999998753
No 305
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=65.16 E-value=11 Score=30.34 Aligned_cols=73 Identities=14% Similarity=0.043 Sum_probs=47.0
Q ss_pred hhHHHHHHhhcccchhHHhhhcceeeEeeec-----------------------cccHHHHhHcCCCCCCeEEEEccCCC
Q 023016 14 NCLSVILRNLLPLMSPFLIQMRKFLTLLKML-----------------------DFSEDTMVLYDFDKVPALVALQPSYN 70 (288)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~k~~~v~~~~-----------------------~~seel~~~y~~~~~PsIvlfk~~de 70 (288)
.|-. .+..+|.+..+.-. ++..+++.. +...++...|++...|+.+++-+...
T Consensus 69 ~C~~--C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~ 144 (176)
T 3kh7_A 69 WCPS--CRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGI 144 (176)
T ss_dssp TCHH--HHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCB
T ss_pred cCHH--HHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCe
Confidence 4543 34556777776654 677777663 33456778888888998888854222
Q ss_pred CcccccCCCCHHHHHHHHHH
Q 023016 71 EHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 71 e~~~f~g~f~~~~L~~FI~~ 90 (288)
-...+.|..+.+.|.++|..
T Consensus 145 i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 145 IRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp EEEEEESCCCHHHHHHHTHH
T ss_pred EEEEEcCCCCHHHHHHHHHH
Confidence 22235677787777777765
No 306
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=64.96 E-value=28 Score=26.76 Aligned_cols=31 Identities=10% Similarity=-0.041 Sum_probs=20.1
Q ss_pred eEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 171 KMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 171 ai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
..++.+ ++. .+.+.+ ..+.++|.+.++..++
T Consensus 129 ~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYFGQ-------NKRKGEIAASIATHMR 161 (164)
T ss_dssp EEEEECTTSCEEEEEET-------TCCHHHHHHHHHHHHG
T ss_pred eEEEECCCCeEEEEeCC-------CCCHHHHHHHHHHHHH
Confidence 677777 442 344433 3678889988888653
No 307
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=64.31 E-value=13 Score=28.41 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=45.2
Q ss_pred HHhhcccchhHHhhhc--ceeeEeeecccc-----------------------HHHHhHcCCCCCCeEEEEccCCCCccc
Q 023016 20 LRNLLPLMSPFLIQMR--KFLTLLKMLDFS-----------------------EDTMVLYDFDKVPALVALQPSYNEHNI 74 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~--k~~~v~~~~~~s-----------------------eel~~~y~~~~~PsIvlfk~~dee~~~ 74 (288)
.+..+|.+..+....+ ++..+++..+-+ .++...|++...|+++++-+...-...
T Consensus 43 C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 43 CREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 3445666666655553 466776666553 337888999999988877542221223
Q ss_pred ccCC--CCHHHHHHHHHHc
Q 023016 75 FYGP--FDEEFLEEFIKQN 91 (288)
Q Consensus 75 f~g~--f~~~~L~~FI~~n 91 (288)
+.|. .+.+.|.++|+.-
T Consensus 123 ~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 123 VVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp EESCCCTTSHHHHHHHHTC
T ss_pred EcCCCccccHHHHHHHHHH
Confidence 4554 3667888888763
No 308
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=63.85 E-value=56 Score=26.28 Aligned_cols=32 Identities=13% Similarity=-0.090 Sum_probs=21.6
Q ss_pred eEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 171 KMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 171 ai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
..++.+ ++. .+.+.+ ..+.+++.+.++..++.
T Consensus 153 ~~~lid~~G~i~~~~~g-------~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 153 TSFLIDRDGVPVERFSP-------GASVKDIEKKLIPLLES 186 (190)
T ss_dssp CEEEECTTSCEEEEECT-------TCCHHHHHHHHHHHHHC
T ss_pred eEEEECCCCcEEEEECC-------CCCHHHHHHHHHHHHhh
Confidence 777777 443 444433 46788999999988754
No 309
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=62.70 E-value=10 Score=30.60 Aligned_cols=69 Identities=9% Similarity=0.018 Sum_probs=45.1
Q ss_pred HhhcccchhHHhhhc--ceeeEeeec-----------------------------cccHHHHhHcCCCCCCeEEEEccCC
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKML-----------------------------DFSEDTMVLYDFDKVPALVALQPSY 69 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~-----------------------------~~seel~~~y~~~~~PsIvlfk~~d 69 (288)
+..+|.+..+....+ ++..+++.. +-..++...|++...|+++++.+.
T Consensus 62 ~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~- 140 (196)
T 2ywi_A 62 KHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRD- 140 (196)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEEEETT-
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEEEcCC-
Confidence 455666666655433 477777765 334578888999989999999642
Q ss_pred CCccc-----------ccCCCCHHHHHHHHHHc
Q 023016 70 NEHNI-----------FYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 70 ee~~~-----------f~g~f~~~~L~~FI~~n 91 (288)
.... +.|..+.+.|.++|+.-
T Consensus 141 -G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 141 -LKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp -CBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred -CeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 2222 34566777788887753
No 310
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=61.99 E-value=9.4 Score=29.86 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=43.2
Q ss_pred HHHhhcccchhHHhhhcceeeEe----eeccccHHHHhHcCCCC-CCeEEEEccCCCCcccc---cCCCCHHHHHHHH
Q 023016 19 ILRNLLPLMSPFLIQMRKFLTLL----KMLDFSEDTMVLYDFDK-VPALVALQPSYNEHNIF---YGPFDEEFLEEFI 88 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~k~~~v~----~~~~~seel~~~y~~~~-~PsIvlfk~~dee~~~f---~g~f~~~~L~~FI 88 (288)
+-+.+.|.+-.|... .++..+= -..+.|.++..+|++.+ .|++.+||+ +..++ .++++.+.|++.+
T Consensus 38 pc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~---G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 38 ISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVN---GEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEET---TEEEEEEEGGGCSHHHHHHHT
T ss_pred hHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEEC---CEEEEEeeccccCHHHHHHhh
Confidence 445667777776653 3332222 23334566899999995 899999994 33344 4678888888765
No 311
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=61.82 E-value=15 Score=27.68 Aligned_cols=54 Identities=19% Similarity=0.255 Sum_probs=38.3
Q ss_pred cceeeEeeeccccHHH------------------------HhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 35 RKFLTLLKMLDFSEDT------------------------MVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 35 ~k~~~v~~~~~~seel------------------------~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
+++..+++..+-+.+. ...|++...|+++++.+ +....+ +..+.+.|+++|+.
T Consensus 62 ~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~--~G~i~~-~~~~~~~l~~~l~~ 138 (142)
T 3ewl_A 62 GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDG--RKRVIL-KDTSMEQLIDYLAT 138 (142)
T ss_dssp TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECT--TCBEEE-CSCCHHHHHHHHHC
T ss_pred CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECC--CCCEEe-cCCCHHHHHHHHHH
Confidence 5588888877755443 23789999999999964 234444 56788999999986
Q ss_pred c
Q 023016 91 N 91 (288)
Q Consensus 91 n 91 (288)
.
T Consensus 139 ~ 139 (142)
T 3ewl_A 139 Q 139 (142)
T ss_dssp -
T ss_pred H
Confidence 4
No 312
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=65.18 E-value=1.8 Score=34.09 Aligned_cols=49 Identities=14% Similarity=0.176 Sum_probs=30.1
Q ss_pred hHHhhcCCCCCCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCcccc
Q 023016 156 DFADTFEANKKSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQ 213 (288)
Q Consensus 156 ~~le~fGL~k~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp 213 (288)
.+.+.||+ ....+|.+++.| ++. .+... ..+.+++.++++...++.-.+
T Consensus 103 ~~~~~~~~-~~~~~P~~~lid~~G~i~~~~~--------g~~~~~l~~~l~~l~~~~~~~ 153 (159)
T 2ls5_A 103 DIFAKYAL-RDAGITRNVLIDREGKIVKLTR--------LYNEEEFASLVQQINEMLKEG 153 (159)
Confidence 34455664 334589988887 332 33332 246778888888877766554
No 313
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=59.64 E-value=31 Score=25.31 Aligned_cols=65 Identities=9% Similarity=0.199 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCc--CchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHH
Q 023016 127 SQKLVTTLKAAASANRELVFCYVGIK--QFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLE 204 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rgl~Fv~VD~~--~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~ 204 (288)
-...+..|+++++ ++.|..+|.+ +.+.+++.+|. .+|++.+ + ++.... . .++.++|.++++
T Consensus 30 C~~~~~~L~~l~~---~i~~~~vdi~~~~~~el~~~~g~----~vP~l~~-~-g~~~~~-~-------g~~~~~l~~~l~ 92 (100)
T 1wjk_A 30 CDEAKEVLQPYKD---RFILQEVDITLPENSTWYERYKF----DIPVFHL-N-GQFLMM-H-------RVNTSKLEKQLR 92 (100)
T ss_dssp HHHHHHHTSTTSS---SSEEEEEETTSSTTHHHHHHSSS----SCSEEEE-S-SSEEEE-S-------SCCHHHHHHHHH
T ss_pred hHHHHHHHHHhhh---CCeEEEEECCCcchHHHHHHHCC----CCCEEEE-C-CEEEEe-c-------CCCHHHHHHHHH
Confidence 3455555554432 2899999987 66666776662 5897753 3 322112 2 378999999998
Q ss_pred HHhc
Q 023016 205 GYRE 208 (288)
Q Consensus 205 ~fl~ 208 (288)
.+++
T Consensus 93 ~~~~ 96 (100)
T 1wjk_A 93 KLSG 96 (100)
T ss_dssp SSSC
T ss_pred HHHh
Confidence 6653
No 314
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=59.36 E-value=18 Score=29.32 Aligned_cols=56 Identities=11% Similarity=0.176 Sum_probs=39.4
Q ss_pred cEEEEEeCcCc--hhHHhhcCCCCCCCCCeEEEEe-C-CceeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 144 LVFCYVGIKQF--ADFADTFEANKKSKLPKMVVWD-G-NENYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 144 l~Fv~VD~~~~--~~~le~fGL~k~~~lPai~I~d-~-~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
+.++.+|.+.- ..+++.|++ ..+|.+++.+ . +..-...+ ..+++++.++++.+++.
T Consensus 78 fv~v~~d~~~~~~~~l~~~y~v---~~~P~~~fld~~~G~~l~~~~-------g~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 78 FIFWQVYHDSEEGQRYIQFYKL---GDFPYVSILDPRTGQKLVEWH-------QLDVSSFLDQVTGFLGE 137 (153)
T ss_dssp EEEEEEESSSHHHHHHHHHHTC---CSSSEEEEECTTTCCCCEEES-------SCCHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCHhHHHHHHHcCC---CCCCEEEEEeCCCCcEeeecC-------CCCHHHHHHHHHHHHHh
Confidence 78888888643 346788998 4789999999 4 43221112 27899999888888753
No 315
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=58.64 E-value=7 Score=34.46 Aligned_cols=69 Identities=12% Similarity=0.004 Sum_probs=41.8
Q ss_pred hhcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCccccc------C-CCCHHHHHHHHHHcC
Q 023016 22 NLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFY------G-PFDEEFLEEFIKQNF 92 (288)
Q Consensus 22 ~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~------g-~f~~~~L~~FI~~ns 92 (288)
.+.|.+..+-.....+..+.+-.+- .+++..|++...|++++|+... ....+. | .++.+.|+.||..+.
T Consensus 150 ~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~-~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 150 ALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGE-LLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTE-EEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCE-EEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 3445554444333344444433332 5578889999999999998422 111121 2 367889999999874
No 316
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=57.65 E-value=13 Score=28.23 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=42.2
Q ss_pred Hhhcccchh---HHhh--hcceeeEeeeccccHH------------------------HHhHcCCCCCCeEEEEccCCCC
Q 023016 21 RNLLPLMSP---FLIQ--MRKFLTLLKMLDFSED------------------------TMVLYDFDKVPALVALQPSYNE 71 (288)
Q Consensus 21 ~~~~~~~~~---~~~~--~~k~~~v~~~~~~see------------------------l~~~y~~~~~PsIvlfk~~dee 71 (288)
+..+|.+.. +.-. .+++..+++..+-+.+ +...|++...|+++++.+ +.
T Consensus 47 ~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~--~G 124 (142)
T 3eur_A 47 AEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDK--NK 124 (142)
T ss_dssp HHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECT--TC
T ss_pred HHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECC--CC
Confidence 344555555 3332 2578888888776643 356688888999999864 23
Q ss_pred cccccCCCCHHHHHHHHH
Q 023016 72 HNIFYGPFDEEFLEEFIK 89 (288)
Q Consensus 72 ~~~f~g~f~~~~L~~FI~ 89 (288)
...+.+ ...+.|++||+
T Consensus 125 ~i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 125 TVLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp BEEEEE-ECHHHHHHHHH
T ss_pred cEEecC-CCHHHHHHHHh
Confidence 444432 35778888886
No 317
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=57.59 E-value=56 Score=25.11 Aligned_cols=35 Identities=9% Similarity=-0.151 Sum_probs=22.9
Q ss_pred CCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 169 LPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 169 lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
.|..++.+ ++. .+.+.+ ..+.+++.+.++..+++|
T Consensus 133 ~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 133 NFSKFLVDRQGQPVKRYSP-------TTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp TTCEEEECTTSCEEEEECT-------TSCGGGGHHHHHHHHHCC
T ss_pred cceEEEECCCCCEEEEcCC-------CCCHHHHHHHHHHHhccC
Confidence 37788887 442 444433 356788888888887654
No 318
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=56.53 E-value=65 Score=24.66 Aligned_cols=76 Identities=8% Similarity=0.055 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeCcC-----------------------chhHHhhcCCCCC--CCCC--eEEEEe-
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGIKQ-----------------------FADFADTFEANKK--SKLP--KMVVWD- 176 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~~~-----------------------~~~~le~fGL~k~--~~lP--ai~I~d- 176 (288)
-......+.++++++++ +.++.++.+. ...+.+.||+ .. ..+| +.++.+
T Consensus 52 C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v-~~~~~~~p~~~~~lid~ 130 (160)
T 1xvw_A 52 CQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV-FNEQAGIANRGTFVVDR 130 (160)
T ss_dssp HHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC-EETTTTEECSEEEEECT
T ss_pred hHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC-ccccCCCeeeeEEEECC
Confidence 34566777788888764 6666665442 3345677787 31 1567 788887
Q ss_pred CCc-eeeccCCCCCCCCCCCHHHHHHHHHHH
Q 023016 177 GNE-NYLTVIGSESIDEEDQGSQISRFLEGY 206 (288)
Q Consensus 177 ~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~f 206 (288)
++. .|...+. ...+-..+++.+.++..
T Consensus 131 ~G~i~~~~~g~---~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 131 SGIIRFAEMKQ---PGEVRDQRLWTDALAAL 158 (160)
T ss_dssp TSBEEEEEECC---TTCCCCHHHHHHHHHHT
T ss_pred CCeEEEEEecC---CCCCCCHHHHHHHHHHh
Confidence 443 3433321 11233566777766653
No 319
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=56.22 E-value=30 Score=27.48 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=46.2
Q ss_pred hhhHHHHHHhhcccchhHHhhhc--ceeeEeeecccc-----HHHHhHcCCC-----------------------CCCeE
Q 023016 13 QNCLSVILRNLLPLMSPFLIQMR--KFLTLLKMLDFS-----EDTMVLYDFD-----------------------KVPAL 62 (288)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--k~~~v~~~~~~s-----eel~~~y~~~-----------------------~~PsI 62 (288)
..|- ..+..+|.+..+....+ ++..+++..+.. .+.+.+|++. ..|++
T Consensus 70 ~~C~--~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~ 147 (186)
T 1jfu_A 70 TWCV--PCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTS 147 (186)
T ss_dssp TTCH--HHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEE
T ss_pred CCCH--hHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEE
Confidence 3564 34556677776665543 688888877654 4566777764 57888
Q ss_pred EEEccCCCCcccccCCC--CHHHHHHHHHH
Q 023016 63 VALQPSYNEHNIFYGPF--DEEFLEEFIKQ 90 (288)
Q Consensus 63 vlfk~~dee~~~f~g~f--~~~~L~~FI~~ 90 (288)
+++-+...-...+.|.. +.+.|.++|+.
T Consensus 148 ~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 148 VLVDPQGCEIATIAGPAEWASEDALKLIRA 177 (186)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHH
T ss_pred EEECCCCCEEEEEecCCccCHHHHHHHHHH
Confidence 88754222122345543 35677777765
No 320
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=55.83 E-value=23 Score=28.55 Aligned_cols=49 Identities=6% Similarity=0.062 Sum_probs=29.3
Q ss_pred hHHhhcCCCCCC----CCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 156 DFADTFEANKKS----KLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 156 ~~le~fGL~k~~----~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
.+.+.||+ ... ..|++++.| ++. .|...+.. ..+-+.++|.+.++....
T Consensus 103 ~~~~~~~v-~~~~~g~~~P~~~lid~~G~i~~~~~g~~---~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 103 TISRQFDV-LNEETGLADRGTFIIDPDGVIQAIEINAD---GIGRDASTLINKVKAAQY 157 (187)
T ss_dssp HHHHHTTC-EETTTTEECEEEEEECTTSBEEEEEEECT---TSCCCTTHHHHHHHHHHH
T ss_pred HHHHHhCC-CcCCCCceeeEEEEECCCCeEEEEEecCC---CCCCCHHHHHHHHHHHhh
Confidence 45567777 311 579999998 443 34332200 112367889988888776
No 321
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=55.45 E-value=49 Score=25.52 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhcC-----CcEEEEEeCc
Q 023016 127 SQKLVTTLKAAASANR-----ELVFCYVGIK 152 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~r-----gl~Fv~VD~~ 152 (288)
-......+++++++++ ++.|+.++.+
T Consensus 51 C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d 81 (172)
T 2k6v_A 51 CPTTLLALKRAYEKLPPKAQERVQVIFVSVD 81 (172)
T ss_dssp HHHHHHHHHHHHTTSCHHHHTTEEEEEEESC
T ss_pred hHHHHHHHHHHHHHhhhhccCCEEEEEEEEC
Confidence 4566778888888887 4667777654
No 322
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=54.62 E-value=70 Score=25.64 Aligned_cols=33 Identities=9% Similarity=-0.160 Sum_probs=21.3
Q ss_pred eEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 171 KMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 171 ai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
..++.| ++. .+.+.+ ..+.++|.+.++..++|.
T Consensus 151 ~~~liD~~G~i~~~~~g-------~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFSP-------GASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp CEEEECTTSCEEEEECT-------TCCHHHHHHHHHHHC---
T ss_pred eEEEECCCCCEEEEECC-------CCCHHHHHHHHHHHHhcC
Confidence 777887 443 344433 468899999999988763
No 323
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=51.26 E-value=23 Score=32.68 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=46.6
Q ss_pred HhhcccchhHHhhhc--ceeeEeeec---------------------------cccHHHHhHcCCCCCCeEEEEccCCCC
Q 023016 21 RNLLPLMSPFLIQMR--KFLTLLKML---------------------------DFSEDTMVLYDFDKVPALVALQPSYNE 71 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~--k~~~v~~~~---------------------------~~seel~~~y~~~~~PsIvlfk~~dee 71 (288)
+..+|.+..+....+ ++..+++.. +...+++..|++...|+++++-+...-
T Consensus 98 ~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~I 177 (352)
T 2hyx_A 98 QRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTV 177 (352)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEEECTTSBE
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeE
Confidence 455666666655443 577777743 223578889999999999998542222
Q ss_pred cccccCCCCHHHHHHHHHH
Q 023016 72 HNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 72 ~~~f~g~f~~~~L~~FI~~ 90 (288)
...+.|..+.+.|.++|+.
T Consensus 178 v~~~~G~~~~~~l~~~I~~ 196 (352)
T 2hyx_A 178 RHIKFGEGDYNVTETLVRQ 196 (352)
T ss_dssp EEEEESBCCHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHH
Confidence 2335677788888888765
No 324
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=50.31 E-value=17 Score=25.10 Aligned_cols=46 Identities=11% Similarity=0.134 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHhcCC-cEEEEEeCc-CchhHHhhcCCCCCCCCCeEEE
Q 023016 126 KSQKLVTTLKAAASANRE-LVFCYVGIK-QFADFADTFEANKKSKLPKMVV 174 (288)
Q Consensus 126 ~~e~~~~~l~~vAk~~rg-l~Fv~VD~~-~~~~~le~fGL~k~~~lPai~I 174 (288)
.-......++++++++.. +.++.+|.+ .....++.+|+ ..+|++++
T Consensus 14 ~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv---~~vPt~~i 61 (80)
T 2k8s_A 14 VCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGV---KSVPALVI 61 (80)
T ss_dssp HHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTC---CEEEEEEE
T ss_pred chHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCC---CcCCEEEE
Confidence 345677777778776644 666666654 35566777888 46899987
No 325
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=50.04 E-value=22 Score=28.97 Aligned_cols=48 Identities=6% Similarity=0.131 Sum_probs=28.4
Q ss_pred hHHhhcCCCCCC---CCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 156 DFADTFEANKKS---KLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 156 ~~le~fGL~k~~---~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
.+.+.||+ ... ..|..++.| ++. .+...+. ...+-+.++|.+.++...
T Consensus 108 ~~~~~~~v-~~~~g~~~P~~~lid~~G~i~~~~~g~---~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 108 SISRDYDV-LFEEAIALRGAFLIDKNMKVRHAVIND---LPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHHHTTC-EETTTEECEEEEEEETTTEEEEEEEES---SSCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCC-cccCCcccceEEEECCCCEEEEEEecC---CCCCCCHHHHHHHHHHHH
Confidence 45566777 211 579999998 443 3333220 011236789999998876
No 326
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=49.61 E-value=31 Score=27.87 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=40.8
Q ss_pred ccchhHHhhhcceeeEeeecccc--HHHHhHcCCCCCCeEEEEccC-CCCcccccCCCCHHHHHHHHHH
Q 023016 25 PLMSPFLIQMRKFLTLLKMLDFS--EDTMVLYDFDKVPALVALQPS-YNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 25 ~~~~~~~~~~~k~~~v~~~~~~s--eel~~~y~~~~~PsIvlfk~~-dee~~~f~g~f~~~~L~~FI~~ 90 (288)
|.|..++- +++..+.+-.+.. ..++..|++.+.|+++++.+. .+......| .+.+.+.++|..
T Consensus 68 ~~V~~~l~--~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 68 EAVKNIIR--EHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp HHHHHHHH--HTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred HHHHHHHH--cCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 56666552 3666666544433 467899999999999999875 223333455 777766655544
No 327
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=49.03 E-value=92 Score=25.26 Aligned_cols=76 Identities=7% Similarity=0.106 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhcCC--cEEEEEeCcC----------------------------chhHHhhcCCCCCC----CCCeEE
Q 023016 128 QKLVTTLKAAASANRE--LVFCYVGIKQ----------------------------FADFADTFEANKKS----KLPKMV 173 (288)
Q Consensus 128 e~~~~~l~~vAk~~rg--l~Fv~VD~~~----------------------------~~~~le~fGL~k~~----~lPai~ 173 (288)
......|.+++++|++ +.|+.++.+. ...+.+.||+ ... .+|+.+
T Consensus 53 ~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv-~~~~~g~~~P~~~ 131 (202)
T 1uul_A 53 PTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGV-LKEEDGVAYRGLF 131 (202)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTC-EETTTTEECEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCC-ccCCCCceeeEEE
Confidence 3445667777777743 6666665542 1234556676 210 579888
Q ss_pred EEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 174 VWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 174 I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+.| ++. .|...+. ....-+.++|.+.++...
T Consensus 132 lid~~G~i~~~~~g~---~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 132 IIDPKQNLRQITVND---LPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp EECTTSBEEEEEEEC---TTBCCCHHHHHHHHHHHH
T ss_pred EECCCCEEEEEEeCC---CCCCCCHHHHHHHHHHhh
Confidence 888 443 3432210 012346788999988877
No 328
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=48.83 E-value=81 Score=24.98 Aligned_cols=25 Identities=8% Similarity=-0.076 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeC
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGI 151 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~ 151 (288)
-......+++++++|++ +.++.+..
T Consensus 53 C~~~~p~l~~l~~~~~~~~~~vi~is~ 79 (180)
T 3kij_A 53 TDRNYLGLKELHKEFGPSHFSVLAFPC 79 (180)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred cHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 44567778888888887 77777753
No 329
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=48.74 E-value=84 Score=24.53 Aligned_cols=22 Identities=9% Similarity=0.007 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhcCC--cEEEEEeC
Q 023016 130 LVTTLKAAASANRE--LVFCYVGI 151 (288)
Q Consensus 130 ~~~~l~~vAk~~rg--l~Fv~VD~ 151 (288)
....+.++++++++ +.++.++.
T Consensus 49 ~~~~l~~l~~~~~~~~v~vv~vs~ 72 (171)
T 3cmi_A 49 QYKELEALYKRYKDEGFTIIGFPC 72 (171)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred hHHHHHHHHHHhccCCeEEEEEEC
Confidence 66778888888876 77777753
No 330
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=47.17 E-value=30 Score=26.86 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=26.9
Q ss_pred HHHhHcCCCCCC---------------eEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 49 DTMVLYDFDKVP---------------ALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 49 el~~~y~~~~~P---------------sIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
++...|++...| +++++-+...-...+.|..+.+.|.++|+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 577788887655 667765422222335677788888887765
No 331
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=45.04 E-value=19 Score=28.80 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=32.6
Q ss_pred eeEeeeccccHH-HHhHcCC--CCCCeEEEEccCCCCcccccCC----------CCHHHHHHHHHHc
Q 023016 38 LTLLKMLDFSED-TMVLYDF--DKVPALVALQPSYNEHNIFYGP----------FDEEFLEEFIKQN 91 (288)
Q Consensus 38 ~~v~~~~~~see-l~~~y~~--~~~PsIvlfk~~dee~~~f~g~----------f~~~~L~~FI~~n 91 (288)
..+.+..+-+++ +...|++ ...|++++|.+.......+.|. .+.+.|.++|+..
T Consensus 80 ~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 80 NFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp TSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred eEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 334444444444 6777888 5599999994322222234442 5778888888763
No 332
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=43.80 E-value=29 Score=28.71 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=29.9
Q ss_pred HHHHhcCC-cEEEEEeCcCchhHHhhc--------CCCCCCCCCeEEEEe-CCc
Q 023016 136 AAASANRE-LVFCYVGIKQFADFADTF--------EANKKSKLPKMVVWD-GNE 179 (288)
Q Consensus 136 ~vAk~~rg-l~Fv~VD~~~~~~~le~f--------GL~k~~~lPai~I~d-~~~ 179 (288)
++|+.+.+ +.++-||.++.+...+.+ |+ ..+|.+++.+ +++
T Consensus 66 ~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv---~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 66 EVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGR---GGWPLNIIMTPGKK 116 (173)
T ss_dssp HHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSC---CCSSEEEEECTTSC
T ss_pred HHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCC---CCCcceeeECCCCC
Confidence 45555554 899999998776665545 77 5789999998 443
No 333
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=43.53 E-value=25 Score=28.15 Aligned_cols=69 Identities=12% Similarity=0.083 Sum_probs=43.6
Q ss_pred HhhcccchhHHhhhcc-eeeEeeec-----------------------------cccHHHHhHcCCCCCCeEEEEccCCC
Q 023016 21 RNLLPLMSPFLIQMRK-FLTLLKML-----------------------------DFSEDTMVLYDFDKVPALVALQPSYN 70 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k-~~~v~~~~-----------------------------~~seel~~~y~~~~~PsIvlfk~~de 70 (288)
+..+|.+..+....+. +..+++.. +-..++...|++...|+++++.+.
T Consensus 49 ~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~-- 126 (188)
T 2cvb_A 49 KGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDER-- 126 (188)
T ss_dssp HTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTT--
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCC--
Confidence 4556666666655444 67777665 234568888999989999998542
Q ss_pred CcccccCC----------CCHHHHHHHHHHc
Q 023016 71 EHNIFYGP----------FDEEFLEEFIKQN 91 (288)
Q Consensus 71 e~~~f~g~----------f~~~~L~~FI~~n 91 (288)
....+.|. .+.+.|.++|+..
T Consensus 127 G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 127 RLLRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp CBEEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred CcEEEEEecCCccccccccCHHHHHHHHHHH
Confidence 23333332 3556677777653
No 334
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=42.90 E-value=33 Score=26.31 Aligned_cols=42 Identities=12% Similarity=0.051 Sum_probs=26.8
Q ss_pred HHHhHcCCCCCC---------------eEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 49 DTMVLYDFDKVP---------------ALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 49 el~~~y~~~~~P---------------sIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
++...|++...| +++++-+...-...+.|..+.+.|.+.|+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 367778887667 666665432222335677777888877765
No 335
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=40.90 E-value=36 Score=26.45 Aligned_cols=55 Identities=9% Similarity=-0.047 Sum_probs=38.5
Q ss_pred cEEEEEeCcCc--hhHHhhcCCCCCCCCCeEEEEeCC-ceeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 023016 144 LVFCYVGIKQF--ADFADTFEANKKSKLPKMVVWDGN-ENYLTVIGSESIDEEDQGSQISRFLEGYRE 208 (288)
Q Consensus 144 l~Fv~VD~~~~--~~~le~fGL~k~~~lPai~I~d~~-~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~ 208 (288)
+.++.+|.+.. ..+...+++ ...|++++++++ +...+.+ -...+.+.++++..+.
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V---~g~PT~i~f~~G~ev~Ri~G-------~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPV---TFTPTFVLMAGDVESGRLEG-------YPGEDFFWPMLARLIG 110 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCC---CSSSEEEEEETTEEEEEEEC-------CCCHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCC---CCCCEEEEEECCEEEeeecC-------CCCHHHHHHHHHHHHh
Confidence 56777777754 345566677 478999999844 3344443 4789999999988764
No 336
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=40.83 E-value=1.2e+02 Score=23.15 Aligned_cols=26 Identities=4% Similarity=0.004 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeCc
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGIK 152 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~~ 152 (288)
-......++++++++++ +.++.++.+
T Consensus 47 C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 47 TNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 34566778888888876 777777653
No 337
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=40.36 E-value=38 Score=26.77 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=34.9
Q ss_pred HhhcccchhHHhhh---cceeeEeeecccc------------------------HHHHhHcCCCCCCeEEEEcc
Q 023016 21 RNLLPLMSPFLIQM---RKFLTLLKMLDFS------------------------EDTMVLYDFDKVPALVALQP 67 (288)
Q Consensus 21 ~~~~~~~~~~~~~~---~k~~~v~~~~~~s------------------------eel~~~y~~~~~PsIvlfk~ 67 (288)
+..+|.+..+.-.. +++..+++..+-+ .+++..|++...|+++++.+
T Consensus 64 ~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~ 137 (165)
T 3s9f_A 64 RGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNA 137 (165)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEET
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeC
Confidence 45566666665544 3677888776665 57888999999999999985
No 338
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=40.19 E-value=17 Score=29.68 Aligned_cols=68 Identities=12% Similarity=-0.060 Sum_probs=43.8
Q ss_pred HhhcccchhHHhhhcceeeEeeeccccHHHHhHcC---CCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 21 RNLLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYD---FDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~---~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
|...|.+..+.....++..+.+..+-+.++...|. +.+.|++++|++.......+ |... ..+.++|..
T Consensus 70 ~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~p-~~~~~~i~~ 140 (167)
T 1z6n_A 70 QINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF-VERP-QAVLDGGPQ 140 (167)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESSC-HHHHHHCHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCCC-HHHHHhHHH
Confidence 45667777766555567777777777788888887 88999999998532222223 4433 334455543
No 339
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=39.59 E-value=19 Score=32.57 Aligned_cols=38 Identities=11% Similarity=0.027 Sum_probs=30.7
Q ss_pred cHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHH
Q 023016 47 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQ 90 (288)
Q Consensus 47 seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ 90 (288)
..+++++|++++.|++.+ +++ .|.|..+.++|.+|+..
T Consensus 240 ~~~la~~~gI~~vPT~~i----~G~--~~~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 240 QAQECTEAGITSYPTWII----NGR--TYTGVRSLEALAVASGY 277 (291)
T ss_dssp CCHHHHTTTCCSTTEEEE----TTE--EEESCCCHHHHHHHTCC
T ss_pred HHHHHHHcCCcccCeEEE----CCE--EecCCCCHHHHHHHHCC
Confidence 578999999999999655 233 38899999999999864
No 340
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=45.20 E-value=6.4 Score=29.80 Aligned_cols=18 Identities=11% Similarity=0.442 Sum_probs=12.3
Q ss_pred hHHhhcCCCCCCCCCeEEEEe
Q 023016 156 DFADTFEANKKSKLPKMVVWD 176 (288)
Q Consensus 156 ~~le~fGL~k~~~lPai~I~d 176 (288)
.+.+.||+ ..+|++++.+
T Consensus 99 ~~~~~~~v---~~~P~~~lid 116 (143)
T 2lus_A 99 NVTAKYGI---TGIPALVIVK 116 (143)
Confidence 44566666 3578888887
No 341
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=38.44 E-value=88 Score=24.76 Aligned_cols=26 Identities=15% Similarity=-0.004 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHhcCC--cEEEEEeCc
Q 023016 127 SQKLVTTLKAAASANRE--LVFCYVGIK 152 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rg--l~Fv~VD~~ 152 (288)
-......|++++++|++ +.++.++.+
T Consensus 62 C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 62 TEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 34556777888888765 777777543
No 342
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=37.63 E-value=1.2e+02 Score=25.25 Aligned_cols=50 Identities=10% Similarity=0.149 Sum_probs=29.9
Q ss_pred hHHhhcCCCCCC----CCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcC
Q 023016 156 DFADTFEANKKS----KLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREG 209 (288)
Q Consensus 156 ~~le~fGL~k~~----~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~G 209 (288)
.+.+.||+ ... .+|++++.| ++. .|...+. .....+.++|.+.++..+..
T Consensus 131 ~i~~~ygv-~~~~~g~~~P~~~liD~~G~I~~~~~g~---~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 131 QISRDYGV-LLEGPGLALRGLFIIDPNGVIKHLSVND---LPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp HHHHHTTC-EETTTTEECEEEEEECTTSBEEEEEEEC---TTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhCC-eecCCCcccceEEEECCCCEEEEEEecC---CCCCCCHHHHHHHHHHhhhh
Confidence 34566676 211 579999998 442 3432210 02235788999999988754
No 343
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=37.58 E-value=43 Score=25.10 Aligned_cols=51 Identities=18% Similarity=0.421 Sum_probs=35.1
Q ss_pred hhHHHHHHhhcccchhHHhhh---cceeeEeeecccc------------------------HHHHhHcCCCCCCeEEEEc
Q 023016 14 NCLSVILRNLLPLMSPFLIQM---RKFLTLLKMLDFS------------------------EDTMVLYDFDKVPALVALQ 66 (288)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~---~k~~~v~~~~~~s------------------------eel~~~y~~~~~PsIvlfk 66 (288)
.|-. -+..+|.+..+.-.. +++..+++..+-+ .+++..|++...|+++++.
T Consensus 39 wC~~--C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid 116 (144)
T 1o73_A 39 WCPP--CRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITIN 116 (144)
T ss_dssp TCHH--HHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEE
T ss_pred CCHH--HHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEE
Confidence 4543 355666666665543 3677777766542 4688889999999999997
No 344
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=37.23 E-value=1.5e+02 Score=23.14 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=24.3
Q ss_pred HhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 158 ADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 158 le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
...+|+ ...|+++| ++ ++ +.+ ..+.+.+.+.++..+
T Consensus 137 a~~~gv---~gtPt~~i--~g-~~-~~G-------~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 137 AQKLGF---NGTPSFVV--ED-AL-VPG-------FVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHTC---CSSSEEEE--TT-EE-ECS-------CCCHHHHHHHHHHHH
T ss_pred HHHcCC---ccCCEEEE--CC-EE-eeC-------CCCHHHHHHHHHHHH
Confidence 456677 57899987 33 32 223 367889999988765
No 345
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=35.30 E-value=95 Score=23.76 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=31.2
Q ss_pred HhhcccchhHHhhh--cceeeEeeeccccHH-----------------------HHhHcCCCCCCeEEEEcc
Q 023016 21 RNLLPLMSPFLIQM--RKFLTLLKMLDFSED-----------------------TMVLYDFDKVPALVALQP 67 (288)
Q Consensus 21 ~~~~~~~~~~~~~~--~k~~~v~~~~~~see-----------------------l~~~y~~~~~PsIvlfk~ 67 (288)
+..+|.+..+.-.. +++..+++..+-.++ +...|++...|+++++.+
T Consensus 51 ~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~ 122 (152)
T 2lrt_A 51 AAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNR 122 (152)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEET
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccCceEEEECC
Confidence 34455555554433 347888877665554 777888888888888864
No 346
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=34.39 E-value=61 Score=24.44 Aligned_cols=46 Identities=15% Similarity=0.382 Sum_probs=33.2
Q ss_pred HhhcccchhHHhhhc---ceeeEeeecccc------------------------HHHHhHcCCCCCCeEEEEc
Q 023016 21 RNLLPLMSPFLIQMR---KFLTLLKMLDFS------------------------EDTMVLYDFDKVPALVALQ 66 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~---k~~~v~~~~~~s------------------------eel~~~y~~~~~PsIvlfk 66 (288)
+..+|.+..+.-..+ ++..+++..+-+ .+++..|++...|+++++.
T Consensus 44 ~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid 116 (146)
T 1o8x_A 44 RGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVD 116 (146)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEE
Confidence 556676666655443 677777766543 4688889999999999997
No 347
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=31.61 E-value=58 Score=27.05 Aligned_cols=73 Identities=11% Similarity=0.138 Sum_probs=47.8
Q ss_pred hhHHHHHHhhcccchhHHhhhc--ceeeEeeec-----------------------------cccHHHHhHcCCCCCCeE
Q 023016 14 NCLSVILRNLLPLMSPFLIQMR--KFLTLLKML-----------------------------DFSEDTMVLYDFDKVPAL 62 (288)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~--k~~~v~~~~-----------------------------~~seel~~~y~~~~~PsI 62 (288)
.|- ..+..+|.+..+.-..+ .+..|++.. +...++...|++...|++
T Consensus 70 ~C~--~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~ 147 (218)
T 3u5r_E 70 RCP--FVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDF 147 (218)
T ss_dssp SCH--HHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEE
T ss_pred CCc--cHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeE
Confidence 354 33566777777666543 378887776 334678889999999999
Q ss_pred EEEccCCCCcccccC-----------CCCHHHHHHHHHH
Q 023016 63 VALQPSYNEHNIFYG-----------PFDEEFLEEFIKQ 90 (288)
Q Consensus 63 vlfk~~dee~~~f~g-----------~f~~~~L~~FI~~ 90 (288)
+++.+ +..+.|.| ..+.+.|.+.|+.
T Consensus 148 ~liD~--~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 148 FLYDR--ERRLVYHGQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp EEECT--TCBEEEEECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred EEECC--CCcEEEeccccccccccccccCHHHHHHHHHH
Confidence 99954 23444543 2345667777765
No 348
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=31.47 E-value=2.1e+02 Score=25.52 Aligned_cols=113 Identities=8% Similarity=-0.031 Sum_probs=68.6
Q ss_pred ceeeEe-eeccccHHHHhHcCCCCCCeEEEEccCCCCcccccC-CCCHHHHHHHHHHcC-CCCeeecCccchhhhccccC
Q 023016 36 KFLTLL-KMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG-PFDEEFLEEFIKQNF-LPLSVPINQDTLNLLKDDKR 112 (288)
Q Consensus 36 k~~~v~-~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g-~f~~~~L~~FI~~ns-lPLV~e~n~et~~~l~~~~~ 112 (288)
|+.+|- =+-+++.++..+|++.-.|--+.+ +++. ..+| +++.+++-+.++... +|.-...++..+..++. ..
T Consensus 21 ki~IvtDSt~dL~~e~~~~~~I~vvPL~v~~---~~~~-y~D~~di~~~efy~~~~~~~~~p~TSqps~~~~~~~f~-~~ 95 (298)
T 3jr7_A 21 SYKVIVDSCGEFTPEMKADGGFEHVALGIQI---EDTQ-WTDDDSLKQEELLLKIAESTSCAKTSCPSPERYMESYH-CD 95 (298)
T ss_dssp CEEEEEETTSCCCHHHHHHSSEEEECCEEEE---TTEE-EECSTTSCHHHHHHHHHHCSSCCEEECCCHHHHHHHHC-SS
T ss_pred CEEEEEECCCCCCHHHHHhCCeEEEEEEEEE---CCEE-EecCCCCCHHHHHHHHHhCCCCceeCCCCHHHHHHHHH-hc
Confidence 455541 233445889999999877866665 3333 2243 688888988998754 68777777766665322 22
Q ss_pred CcEEEEEEcc--ChhhHHHHHHHHHHHHHhcCCcEEEEEeCcC
Q 023016 113 KIVLAIVEDE--TEEKSQKLVTTLKAAASANRELVFCYVGIKQ 153 (288)
Q Consensus 113 ~~~l~~lf~~--~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~ 153 (288)
.-.+.++... -+..++.....-+.+.++|++.....+|+..
T Consensus 96 ~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~ViDS~~ 138 (298)
T 3jr7_A 96 AERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIHVFNSRS 138 (298)
T ss_dssp CSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEEEEECSS
T ss_pred CCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEEEECCCc
Confidence 3344444433 2234555554445566677777778888863
No 349
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=31.31 E-value=1.8e+02 Score=22.32 Aligned_cols=90 Identities=9% Similarity=0.063 Sum_probs=46.9
Q ss_pred EEEEEEccC--hhhHHHHHHHHHHHHHhcCCcEEEEEeCcC-----------------------chhHHhhcCCCCCC--
Q 023016 115 VLAIVEDET--EEKSQKLVTTLKAAASANRELVFCYVGIKQ-----------------------FADFADTFEANKKS-- 167 (288)
Q Consensus 115 ~l~~lf~~~--~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~~-----------------------~~~~le~fGL~k~~-- 167 (288)
++++.|..+ -..-......+++++++++++.|+.++.+. ...+.+.||+ ...
T Consensus 46 ~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v-~~~~~ 124 (167)
T 2jsy_A 46 VTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV-YIKEL 124 (167)
T ss_dssp CEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC-BBTTT
T ss_pred eEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC-ccccC
Confidence 444444432 223345566778888888556666665431 0123455666 221
Q ss_pred C--CCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 168 K--LPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 168 ~--lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
. .|..++.| ++. .|...+.. .....+.+++.+.++..+
T Consensus 125 g~~~p~~~lid~~G~i~~~~~g~~--~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 125 RLLARSVFVLDENGKVVYAEYVSE--ATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CSBCCEEEEECTTSCEEEEEECSB--TTSCCCSHHHHHHHHHHH
T ss_pred CceeeEEEEEcCCCcEEEEEecCC--cCCCCCHHHHHHHHHHhh
Confidence 1 48888888 443 44332200 012335677887777654
No 350
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=30.52 E-value=66 Score=24.12 Aligned_cols=46 Identities=26% Similarity=0.369 Sum_probs=32.8
Q ss_pred HhhcccchhHHhhhc---ceeeEeeecccc------------------------HHHHhHcCCCCCCeEEEEc
Q 023016 21 RNLLPLMSPFLIQMR---KFLTLLKMLDFS------------------------EDTMVLYDFDKVPALVALQ 66 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~---k~~~v~~~~~~s------------------------eel~~~y~~~~~PsIvlfk 66 (288)
+..+|.+..+.-..+ ++..+++..+-+ .+++..|++...|+++++.
T Consensus 44 ~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid 116 (144)
T 1i5g_A 44 RAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVE 116 (144)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEE
Confidence 455666666655443 677777766542 4688889999999999996
No 351
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=29.22 E-value=88 Score=29.84 Aligned_cols=64 Identities=6% Similarity=-0.004 Sum_probs=42.3
Q ss_pred hcccchhHHhhhcceeeEeeeccccHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 23 LLPLMSPFLIQMRKFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 23 ~~~~~~~~~~~~~k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
+.|.+..+-....++...-+-.+-..++..+|++.+.|++++ ++ .....|....+.|.+|+...
T Consensus 135 ~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i~svPt~~i----~g-~~~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 135 VVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFV----NG-KEFGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp HHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSSSEEEE----TT-EEEEESCCCHHHHHHHHCCS
T ss_pred HHHHHHHHHhHcCceEEEEEechhhHHHHHHhCCCccCEEEE----CC-EEEecCCCCHHHHHHHHhhc
Confidence 334444433333344444445566689999999999999977 22 33455878889999998664
No 352
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.10 E-value=49 Score=25.39 Aligned_cols=44 Identities=20% Similarity=0.399 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCC-cEEEEEeCcCch----hHHhhcCCCCCCCCCeEEEEe
Q 023016 128 QKLVTTLKAAASANRE-LVFCYVGIKQFA----DFADTFEANKKSKLPKMVVWD 176 (288)
Q Consensus 128 e~~~~~l~~vAk~~rg-l~Fv~VD~~~~~----~~le~fGL~k~~~lPai~I~d 176 (288)
++++..++++.++|.. +..+.+|..+|. ++...+|. + -.++|++
T Consensus 36 qelkdsieelvkkynativvvvvddkewaekairfvkslga----q-vliiiyd 84 (134)
T 2l69_A 36 QELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGA----Q-VLIIIYD 84 (134)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCC----C-CEEEEEC
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCC----e-EEEEEEe
Confidence 5788888999999988 888888988885 34566666 2 2466766
No 353
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=28.44 E-value=1.8e+02 Score=26.35 Aligned_cols=105 Identities=13% Similarity=0.012 Sum_probs=60.3
Q ss_pred ccccHHHHhHcCCCCCCeEEEEccCCCCcccccC-C--CCHHHHHHHHHHcCCCCeeecCccchhhhc--cccCCcEEEE
Q 023016 44 LDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG-P--FDEEFLEEFIKQNFLPLSVPINQDTLNLLK--DDKRKIVLAI 118 (288)
Q Consensus 44 ~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g-~--f~~~~L~~FI~~nslPLV~e~n~et~~~l~--~~~~~~~l~~ 118 (288)
-|++++++.+|++.-.|--+.+ +++. ..+| + ++.+++-++++....|--...++..+..++ +.+.+..+.+
T Consensus 45 ~dL~~e~~~~~~I~vvPL~v~~---~~~~-Y~D~vd~~i~~~efy~~m~~~~~p~TSqPs~~~~~~~f~~l~~~g~~Ii~ 120 (320)
T 3pl5_A 45 ADLPESWTQENDVQVLGLTVQL---DGIT-YETVGPDRLTSRVLLEKIAAGSKPTTSQVNVGQFESYFRQSAENGQEVLY 120 (320)
T ss_dssp GCCCHHHHHHHTEEEECCEEEE---TTEE-EESSSTTCCCHHHHHHHHHTTCCCEEECCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCHHHHHhCCeEEEeEEEEE---CCEE-EEcCCCCCcCHHHHHHHHhcCCCCccCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 3455889999999877766665 3332 2233 3 888899999988777766666654433311 1112223344
Q ss_pred EEcc--ChhhHHHHHHHHHHHHHhcCCcEEEEEeCc
Q 023016 119 VEDE--TEEKSQKLVTTLKAAASANRELVFCYVGIK 152 (288)
Q Consensus 119 lf~~--~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~ 152 (288)
+... -+..++.....-+.+..+|++.....+|+.
T Consensus 121 I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~ViDS~ 156 (320)
T 3pl5_A 121 IAFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTL 156 (320)
T ss_dssp EECCTTTCTHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred EecCchHhHHHHHHHHHHHHHHhhCCCCeEEEEcCC
Confidence 4332 223344444444445556777666677776
No 354
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=27.99 E-value=2.3e+02 Score=22.58 Aligned_cols=90 Identities=9% Similarity=0.074 Sum_probs=48.6
Q ss_pred cEEEEEEc-cCh-hhHHHHHHHHHHHHHhcCC--cEEEEEeCcCc----------------------------hhHHhhc
Q 023016 114 IVLAIVED-ETE-EKSQKLVTTLKAAASANRE--LVFCYVGIKQF----------------------------ADFADTF 161 (288)
Q Consensus 114 ~~l~~lf~-~~~-e~~e~~~~~l~~vAk~~rg--l~Fv~VD~~~~----------------------------~~~le~f 161 (288)
.++++.|. .+- ..-......|.+++++|++ +.++.|+.+.. ..+.+.|
T Consensus 35 k~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~ 114 (197)
T 1qmv_A 35 KYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDY 114 (197)
T ss_dssp SEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHT
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHc
Confidence 34555555 211 1233445667777777754 66666655421 1345566
Q ss_pred CCCCCC----CCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 162 EANKKS----KLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 162 GL~k~~----~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
|+ ... ..|+.++.| ++. .|...+. ...+-+.+++.+.++...
T Consensus 115 gv-~~~~~~~~~P~~~lid~~G~i~~~~~g~---~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 115 GV-LKTDEGIAYRGLFIIDGKGVLRQITVND---LPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TC-EETTTTEECEEEEEECTTSBEEEEEEEC---TTBCCCHHHHHHHHHHHH
T ss_pred CC-ccCCCCceeeEEEEECCCCcEEEEEeCC---CCCCCCHHHHHHHHHhcc
Confidence 66 211 478888888 442 3332220 011346788888888875
No 355
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=26.84 E-value=2.2e+02 Score=23.46 Aligned_cols=47 Identities=15% Similarity=0.161 Sum_probs=26.3
Q ss_pred HHhhcCCCCC---CCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 157 FADTFEANKK---SKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 157 ~le~fGL~k~---~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
+.+.||+ .. ...|..+|.| ++. .|...+.. ...-+.++|.+.++...
T Consensus 128 ~~~~ygv-~~~~g~~~p~~~lID~~G~i~~~~~~~~---~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 128 ISKDYNV-LFDDSVSLRAFVLIDMNGIVQHLLVNNL---AIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHHTTC-EETTTEECEEEEEECTTSBEEEEEEECT---TCCCCHHHHHHHHHHHH
T ss_pred HHHHhCC-ccccCCcccEEEEECCCCEEEEEEecCC---CCCCCHHHHHHHHHHHH
Confidence 4455666 20 0478888888 442 44332200 11246888888888876
No 356
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=26.71 E-value=50 Score=25.49 Aligned_cols=33 Identities=3% Similarity=-0.037 Sum_probs=20.7
Q ss_pred CCCCeEEEEccCCCCcccccCCC--CHHHHHHHHHH
Q 023016 57 DKVPALVALQPSYNEHNIFYGPF--DEEFLEEFIKQ 90 (288)
Q Consensus 57 ~~~PsIvlfk~~dee~~~f~g~f--~~~~L~~FI~~ 90 (288)
...|+++++. ...-...+.|.. +.+.|.++|+.
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 4568888887 322122345555 77888888865
No 357
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=26.24 E-value=2.3e+02 Score=22.31 Aligned_cols=24 Identities=17% Similarity=-0.036 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhcCC--cEEEEEeC
Q 023016 128 QKLVTTLKAAASANRE--LVFCYVGI 151 (288)
Q Consensus 128 e~~~~~l~~vAk~~rg--l~Fv~VD~ 151 (288)
......++++++++++ +.++.++.
T Consensus 65 ~~~~~~l~~l~~~~~~~~v~vv~is~ 90 (185)
T 2gs3_A 65 EVNYTQLVDLHARYAECGLRILAFPC 90 (185)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 3455677777777765 77777754
No 358
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=26.04 E-value=2.2e+02 Score=21.69 Aligned_cols=38 Identities=5% Similarity=-0.183 Sum_probs=23.7
Q ss_pred CCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHhcCc
Q 023016 168 KLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYREGR 210 (288)
Q Consensus 168 ~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gk 210 (288)
..|+.++.| ++. .+.+.+ ....+.++|.+.++..++.|
T Consensus 135 ~~p~~~lid~~G~i~~~~~g-----~~~~~~~~l~~~l~~ll~~k 174 (174)
T 1xzo_A 135 HQSSFYLVGPDGKVLKDYNG-----VENTPYDDIISDVKSASTLK 174 (174)
T ss_dssp SCCEEEEECTTSEEEEEEES-----SSSCCHHHHHHHHHHHTCCC
T ss_pred eeeEEEEECCCCeEEEEEcC-----CCCCCHHHHHHHHHHHHhcC
Confidence 368878888 443 343333 11235889999999877653
No 359
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=25.95 E-value=1.1e+02 Score=22.88 Aligned_cols=66 Identities=17% Similarity=0.050 Sum_probs=40.0
Q ss_pred HhhcccchhHHhhh--cceeeEeeecccc--------------------------HHHHhHcCCCCCCeEEEEccCCCCc
Q 023016 21 RNLLPLMSPFLIQM--RKFLTLLKMLDFS--------------------------EDTMVLYDFDKVPALVALQPSYNEH 72 (288)
Q Consensus 21 ~~~~~~~~~~~~~~--~k~~~v~~~~~~s--------------------------eel~~~y~~~~~PsIvlfk~~dee~ 72 (288)
+..+|.+..+.-.. +++..+++..+-+ .++...|++...|+.+++.+. ..
T Consensus 48 ~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~--G~ 125 (143)
T 4fo5_A 48 RARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDE--GV 125 (143)
T ss_dssp HHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTT--SB
T ss_pred HHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCCCCCcEEEECCC--CE
Confidence 44556666665544 3577777765532 356677888888888887642 33
Q ss_pred ccccCCCCHHHHHHHHH
Q 023016 73 NIFYGPFDEEFLEEFIK 89 (288)
Q Consensus 73 ~~f~g~f~~~~L~~FI~ 89 (288)
..+. ....+.|+++|+
T Consensus 126 i~~~-~~~~~~l~~~l~ 141 (143)
T 4fo5_A 126 IIAA-NVTPEKLTEILK 141 (143)
T ss_dssp EEEE-SCCHHHHHHHHT
T ss_pred EEEc-cCCHHHHHHHHH
Confidence 3332 235667777764
No 360
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=25.88 E-value=1.3e+02 Score=23.13 Aligned_cols=46 Identities=7% Similarity=-0.056 Sum_probs=29.3
Q ss_pred hhcccchhHHhhh--cceeeEeeecc---------------------ccHHHHhHcCCCC----CCeEEEEcc
Q 023016 22 NLLPLMSPFLIQM--RKFLTLLKMLD---------------------FSEDTMVLYDFDK----VPALVALQP 67 (288)
Q Consensus 22 ~~~~~~~~~~~~~--~k~~~v~~~~~---------------------~seel~~~y~~~~----~PsIvlfk~ 67 (288)
..+|.+..+.-.. +.+..|++..| ...++...|++.+ .|+.+++-+
T Consensus 47 ~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~ 119 (161)
T 3drn_A 47 REASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDK 119 (161)
T ss_dssp HHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECC
Confidence 3445454444433 34777877766 3456777788877 788888754
No 361
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=25.46 E-value=33 Score=30.97 Aligned_cols=63 Identities=10% Similarity=0.016 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEeC----cCchhHHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHH
Q 023016 125 EKSQKLVTTLKAAASANRELVFCYVGI----KQFADFADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQIS 200 (288)
Q Consensus 125 e~~e~~~~~l~~vAk~~rgl~Fv~VD~----~~~~~~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~ 200 (288)
..-..+...++++|++++ ++-+|. +++++..+.+|+ ...|++.+ ++++| .+ ..+.+++.
T Consensus 210 ~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~~la~~~gI---~~vPT~~i--~G~~~--~G-------~~~~~~L~ 272 (291)
T 3kp9_A 210 PHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGI---TSYPTWII--NGRTY--TG-------VRSLEALA 272 (291)
T ss_dssp HHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCCHHHHTTTC---CSTTEEEE--TTEEE--ES-------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC---EEEEeecCchhhHHHHHHHcCC---cccCeEEE--CCEEe--cC-------CCCHHHHH
Confidence 345678888888887653 444442 225677888999 57899776 44444 33 46889999
Q ss_pred HHHH
Q 023016 201 RFLE 204 (288)
Q Consensus 201 ~Fl~ 204 (288)
+|++
T Consensus 273 ~~l~ 276 (291)
T 3kp9_A 273 VASG 276 (291)
T ss_dssp HHTC
T ss_pred HHHC
Confidence 8874
No 362
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=30.09 E-value=16 Score=28.28 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=16.1
Q ss_pred Hhhcccchh-HHhh---hcceeeEeeeccccHHHH
Q 023016 21 RNLLPLMSP-FLIQ---MRKFLTLLKMLDFSEDTM 51 (288)
Q Consensus 21 ~~~~~~~~~-~~~~---~~k~~~v~~~~~~seel~ 51 (288)
+..+|.+.. +... .+++..+++..+-+.+.+
T Consensus 49 ~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 49 RKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 455666655 4333 235667766655443333
No 363
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=24.20 E-value=85 Score=25.24 Aligned_cols=47 Identities=2% Similarity=-0.154 Sum_probs=29.9
Q ss_pred cHHHHhHcCCC-----CCCeEEEEccCCCCcccccCCC----CHHHHHHHHHHcCC
Q 023016 47 SEDTMVLYDFD-----KVPALVALQPSYNEHNIFYGPF----DEEFLEEFIKQNFL 93 (288)
Q Consensus 47 seel~~~y~~~-----~~PsIvlfk~~dee~~~f~g~f----~~~~L~~FI~~nsl 93 (288)
..++...|++. ..|+++++.+...-...+.|.. +.+.|.++|+.-..
T Consensus 115 ~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 115 KRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp TSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred chHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 45677888888 7899999864321112233432 57788888877543
No 364
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=24.17 E-value=2.5e+02 Score=24.91 Aligned_cols=106 Identities=10% Similarity=0.079 Sum_probs=59.6
Q ss_pred ccccHHHHhHcCCCCCCeEEEEccCCCCcccccC-CCCHHHHHHHHHHc--CCCCeeecCccchhhh--ccccCCcEEEE
Q 023016 44 LDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYG-PFDEEFLEEFIKQN--FLPLSVPINQDTLNLL--KDDKRKIVLAI 118 (288)
Q Consensus 44 ~~~seel~~~y~~~~~PsIvlfk~~dee~~~f~g-~f~~~~L~~FI~~n--slPLV~e~n~et~~~l--~~~~~~~~l~~ 118 (288)
-|++.+++.+|++.-.|--+.+ +++....+| +++.+++-++++.. .+|--...++..+..+ ...+.+-.+.+
T Consensus 13 ~dl~~e~~~~~~I~vvPl~v~~---~~~~y~~D~~di~~~efy~~~~~~~~~~p~TSqps~~~~~~~f~~l~~~g~~ii~ 89 (297)
T 3nyi_A 13 CDLSKEYLEKHDVTIVPLSVSF---DGETYYRDGVDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQGFPVVC 89 (297)
T ss_dssp GCCCHHHHHHHTEEEECCEEES---SSSCEEEBTTTBCHHHHHHHHHHCTTCCCEEECCCHHHHHHHHHHHHTTTCCEEE
T ss_pred CCCCHHHHHhCCeEEEEEEEEE---CCEEEecCCCCCCHHHHHHHHHhCCCCCceecCCCHHHHHHHHHHHHHCCCeEEE
Confidence 3455888999999877755554 333320244 68888999999887 7787666666443331 11122233344
Q ss_pred EEcc--ChhhHHHHHHHHHHHHHhcCCcEEEEEeCc
Q 023016 119 VEDE--TEEKSQKLVTTLKAAASANRELVFCYVGIK 152 (288)
Q Consensus 119 lf~~--~~e~~e~~~~~l~~vAk~~rgl~Fv~VD~~ 152 (288)
+... -+..++.....-+.+.+.|++.....+|+.
T Consensus 90 i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~ViDS~ 125 (297)
T 3nyi_A 90 FTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSK 125 (297)
T ss_dssp EESCTTTCSHHHHHHHHHHHHHHHCTTCCEEEEECS
T ss_pred EECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 4332 222333333333333366766666667776
No 365
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=24.11 E-value=94 Score=24.78 Aligned_cols=33 Identities=30% Similarity=0.408 Sum_probs=23.6
Q ss_pred ceeeEeeeccccHHHHhHcCCCCCCeEEEEccCC
Q 023016 36 KFLTLLKMLDFSEDTMVLYDFDKVPALVALQPSY 69 (288)
Q Consensus 36 k~~~v~~~~~~seel~~~y~~~~~PsIvlfk~~d 69 (288)
++..|.+-.+ ..++...|++.+.|++++|++..
T Consensus 79 ~fv~V~vD~e-~~~~~~~~~v~~~PT~~f~~~~G 111 (151)
T 3ph9_A 79 KFIMLNLMHE-TTDKNLSPDGQYVPRIMFVDPSL 111 (151)
T ss_dssp TCEEEEESSC-CSCGGGCTTCCCSSEEEEECTTS
T ss_pred CeEEEEecCC-chhhHhhcCCCCCCEEEEECCCC
Confidence 6777766422 33556788999999999998643
No 366
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=22.78 E-value=1.6e+02 Score=23.36 Aligned_cols=48 Identities=17% Similarity=0.214 Sum_probs=27.7
Q ss_pred hHHhhcCCCC---CCCCCeEEEEe-CCc-eeeccCCCCCCCCCCCHHHHHHHHHHHh
Q 023016 156 DFADTFEANK---KSKLPKMVVWD-GNE-NYLTVIGSESIDEEDQGSQISRFLEGYR 207 (288)
Q Consensus 156 ~~le~fGL~k---~~~lPai~I~d-~~~-KY~~~~~~~~~~~e~t~e~I~~Fl~~fl 207 (288)
.+.+.||+ . ....|+.+|.| ++. .|...+.. ..+.+.+++.+.++...
T Consensus 106 ~~~~~~gv-~~~~g~~~P~~~liD~~G~i~~~~~g~~---~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 106 SIARSYDV-LFNESVALRAFVLIDKQGVVQHLLVNNL---ALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHHHTTC-EETTTEECCEEEEECTTSBEEEEEEGGG---SSGGGHHHHHHHHHHHH
T ss_pred HHHHHhCC-cCcCCceeeEEEEEcCCCEEEEEEeCCC---CCCCCHHHHHHHHHHHh
Confidence 34566777 2 11579999998 443 34332200 11246788888888776
No 367
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=21.69 E-value=2.9e+02 Score=21.52 Aligned_cols=23 Identities=22% Similarity=0.141 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeCc
Q 023016 129 KLVTTLKAAASANRELVFCYVGIK 152 (288)
Q Consensus 129 ~~~~~l~~vAk~~rgl~Fv~VD~~ 152 (288)
.....|.+++++ +++.|+.|+.+
T Consensus 62 ~~~~~l~~l~~~-~~v~vv~Is~D 84 (175)
T 1xvq_A 62 TSVRTFDERAAA-SGATVLCVSKD 84 (175)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEESS
T ss_pred HHHHHHHHHHhh-cCCEEEEEECC
Confidence 344556666665 55666666544
No 368
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=21.26 E-value=2.8e+02 Score=21.27 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=53.6
Q ss_pred EEccChhhHHHHHHHHHHHHHhcC-C--cEEEEEeCcCchhHHhhcCCCCCCCCCeEEEEe--CCceeeccCCCCCCCCC
Q 023016 119 VEDETEEKSQKLVTTLKAAASANR-E--LVFCYVGIKQFADFADTFEANKKSKLPKMVVWD--GNENYLTVIGSESIDEE 193 (288)
Q Consensus 119 lf~~~~e~~e~~~~~l~~vAk~~r-g--l~Fv~VD~~~~~~~le~fGL~k~~~lPai~I~d--~~~KY~~~~~~~~~~~e 193 (288)
++......+....+.++++-+.+. + +..=.+|..+.+..++.+.+ .-.|+++=.. ..++. -+ +
T Consensus 17 yvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~I---vATPTLIK~~P~P~rri--iG-------d 84 (105)
T 1t4y_A 17 LFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRL---VVTPALVKIGPGSRQVL--SG-------I 84 (105)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTC---CSSSEEEEEESSSCEEE--ES-------S
T ss_pred eEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCe---eeccHhhccCCCCceEE--eC-------h
Confidence 344444566777788888777665 4 88888999999999999998 5689987333 22222 12 3
Q ss_pred CCHHHHHHHHHHHh
Q 023016 194 DQGSQISRFLEGYR 207 (288)
Q Consensus 194 ~t~e~I~~Fl~~fl 207 (288)
--..+++.|.-...
T Consensus 85 ~i~~ql~~wwprWq 98 (105)
T 1t4y_A 85 DLTDQLANQLPQWL 98 (105)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHH
Confidence 35678888887766
No 369
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=20.95 E-value=1.2e+02 Score=25.05 Aligned_cols=39 Identities=13% Similarity=0.213 Sum_probs=30.5
Q ss_pred HHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHc
Q 023016 48 EDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQN 91 (288)
Q Consensus 48 eel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~n 91 (288)
.++...+++.+.|++++ . +++ .+.|..+.+.|.++|...
T Consensus 171 ~~l~~~~gV~gTPt~vi-~--nG~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 171 YELGIQFGVRGTPSIVT-S--TGE--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp HHHHHHHTCCSSCEEEC-T--TSC--CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHcCCCcCCEEEE-e--CCE--EecCCCCHHHHHHHHHhc
Confidence 56788899999999987 3 233 456777889999999864
No 370
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=20.67 E-value=1.1e+02 Score=25.23 Aligned_cols=44 Identities=14% Similarity=0.190 Sum_probs=30.3
Q ss_pred HHhhcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHHHHHhcCccccc
Q 023016 157 FADTFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFLEGYREGRTEQK 214 (288)
Q Consensus 157 ~le~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl~~fl~Gklkp~ 214 (288)
....+|+ ...|+++| ++ +| +.+ ..+.+.+.+.++..+.||++-+
T Consensus 155 ~a~~~gV---~gtPtfvv--nG-~~-~~G-------~~~~e~l~~~i~~~~~~~~~~~ 198 (202)
T 3gha_A 155 LNQKMNI---QATPTIYV--ND-KV-IKN-------FADYDEIKETIEKELKGKLEHH 198 (202)
T ss_dssp HHHHTTC---CSSCEEEE--TT-EE-CSC-------TTCHHHHHHHHHHHHHHC----
T ss_pred HHHHcCC---CcCCEEEE--CC-EE-ecC-------CCCHHHHHHHHHHHHHhhhhhc
Confidence 3566788 57899998 33 45 233 3689999999999999998754
No 371
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=20.36 E-value=92 Score=24.67 Aligned_cols=41 Identities=24% Similarity=0.252 Sum_probs=31.5
Q ss_pred cHHHHhHcCCCCCCeEEEEccCCCCcccccCCCCHHHHHHHHHHcC
Q 023016 47 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNF 92 (288)
Q Consensus 47 seel~~~y~~~~~PsIvlfk~~dee~~~f~g~f~~~~L~~FI~~ns 92 (288)
..++...+++++.|++++ + +++ ...|..+.+.|.++|....
T Consensus 98 ~~~la~~~gI~gtPt~vi-~--nG~--~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 98 TTSLGEQFGFNGTPTLVF-P--NGR--TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp HHHHHHHTTCCSSCEEEC-T--TSC--EEESCCCTTHHHHHHHHTS
T ss_pred HHHHHHHhCCCccCEEEE-E--CCE--EeeCCCCHHHHHHHHHHHH
Confidence 467788999999999998 3 232 3567778888999998763
No 372
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=20.24 E-value=1.8e+02 Score=18.72 Aligned_cols=58 Identities=17% Similarity=0.122 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCcCchhHHh---hcCCCCCCCCCeEEEEeCCceeeccCCCCCCCCCCCHHHHHHHH
Q 023016 127 SQKLVTTLKAAASANRELVFCYVGIKQFADFAD---TFEANKKSKLPKMVVWDGNENYLTVIGSESIDEEDQGSQISRFL 203 (288)
Q Consensus 127 ~e~~~~~l~~vAk~~rgl~Fv~VD~~~~~~~le---~fGL~k~~~lPai~I~d~~~KY~~~~~~~~~~~e~t~e~I~~Fl 203 (288)
-...+..+++. ++.|..+|.+..+...+ .+|. ..+|++.+ ++. . . . .++.+.|.+++
T Consensus 14 C~~~~~~l~~~-----~i~~~~~di~~~~~~~~~~~~~~~---~~vP~l~~--~g~-~-~-~-------g~~~~~l~~~l 73 (75)
T 1r7h_A 14 CTATKKALDRA-----GLAYNTVDISLDDEARDYVMALGY---VQAPVVEV--DGE-H-W-S-------GFRPERIKQLQ 73 (75)
T ss_dssp HHHHHHHHHHT-----TCCCEEEETTTCHHHHHHHHHTTC---BCCCEEEE--TTE-E-E-E-------SCCHHHHHHHH
T ss_pred HHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHcCC---CccCEEEE--CCe-E-E-c-------CCCHHHHHHHH
Confidence 34444444432 57777788776544333 5666 57898874 332 2 2 2 26788888887
Q ss_pred H
Q 023016 204 E 204 (288)
Q Consensus 204 ~ 204 (288)
+
T Consensus 74 ~ 74 (75)
T 1r7h_A 74 A 74 (75)
T ss_dssp C
T ss_pred h
Confidence 4
Done!