Query 023018
Match_columns 288
No_of_seqs 547 out of 3043
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 14:56:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023018.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023018hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 2.1E-42 7.2E-47 281.8 35.2 230 53-285 2-239 (304)
2 1vyh_C Platelet-activating fac 100.0 9.5E-42 3.3E-46 289.1 34.8 227 55-285 99-349 (410)
3 3ow8_A WD repeat-containing pr 100.0 8.2E-42 2.8E-46 280.3 32.6 226 56-285 72-301 (321)
4 3frx_A Guanine nucleotide-bind 100.0 3.9E-41 1.3E-45 276.1 34.8 227 55-285 8-248 (319)
5 1vyh_C Platelet-activating fac 100.0 1.8E-41 6.3E-46 287.3 33.3 229 53-285 139-391 (410)
6 1got_B GT-beta; complex (GTP-b 100.0 1.3E-40 4.6E-45 275.3 35.8 229 52-285 43-281 (340)
7 3ow8_A WD repeat-containing pr 100.0 8.4E-41 2.9E-45 274.3 32.3 232 51-285 19-259 (321)
8 2ynn_A Coatomer subunit beta'; 100.0 1.6E-40 5.4E-45 270.7 33.7 228 54-285 45-281 (304)
9 2pbi_B Guanine nucleotide-bind 100.0 8.8E-40 3E-44 271.8 38.0 232 52-285 52-337 (354)
10 4ery_A WD repeat-containing pr 100.0 5.8E-40 2E-44 268.2 35.1 221 53-276 12-232 (312)
11 4gqb_B Methylosome protein 50; 100.0 1.8E-40 6E-45 274.7 32.0 222 59-285 77-310 (344)
12 1got_B GT-beta; complex (GTP-b 100.0 3E-39 1E-43 267.2 36.3 230 53-285 86-323 (340)
13 4gqb_B Methylosome protein 50; 100.0 1.2E-39 4E-44 269.7 31.4 208 58-270 121-334 (344)
14 2xzm_R RACK1; ribosome, transl 100.0 5.3E-39 1.8E-43 266.0 32.9 228 53-285 10-266 (343)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-38 4.1E-43 264.1 31.8 208 55-266 6-224 (345)
16 3frx_A Guanine nucleotide-bind 100.0 5E-38 1.7E-42 257.7 34.8 224 55-285 56-297 (319)
17 2pm7_B Protein transport prote 100.0 2.7E-38 9.2E-43 256.7 32.6 225 57-285 2-265 (297)
18 3iz6_a 40S ribosomal protein R 100.0 1.2E-39 4E-44 273.7 25.1 229 53-285 55-309 (380)
19 2hes_X YDR267CP; beta-propelle 100.0 2.1E-38 7.2E-43 261.1 31.5 209 54-268 4-231 (330)
20 4ery_A WD repeat-containing pr 100.0 1E-37 3.6E-42 254.8 34.7 232 53-285 54-290 (312)
21 2pbi_B Guanine nucleotide-bind 100.0 1.2E-37 4.1E-42 258.9 32.3 206 55-264 145-354 (354)
22 1erj_A Transcriptional repress 100.0 1.9E-37 6.5E-42 261.3 33.9 215 65-284 124-362 (393)
23 3dm0_A Maltose-binding peripla 100.0 9.2E-38 3.1E-42 281.3 34.0 227 56-285 374-613 (694)
24 4g56_B MGC81050 protein; prote 100.0 4.3E-38 1.5E-42 261.9 29.5 207 58-269 133-345 (357)
25 4g56_B MGC81050 protein; prote 100.0 3.3E-38 1.1E-42 262.6 28.1 224 56-284 86-321 (357)
26 1nr0_A Actin interacting prote 100.0 1.8E-37 6.1E-42 275.5 33.3 218 54-274 49-277 (611)
27 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-37 5E-42 256.3 30.3 215 56-274 3-344 (351)
28 2hes_X YDR267CP; beta-propelle 100.0 4.2E-37 1.4E-41 253.3 31.5 224 57-284 49-305 (330)
29 3zwl_B Eukaryotic translation 100.0 2.2E-36 7.6E-41 251.5 35.0 227 54-285 22-270 (369)
30 3bg1_A Protein SEC13 homolog; 100.0 4.6E-38 1.6E-42 257.5 24.4 227 58-285 7-273 (316)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.5E-37 3.2E-41 252.7 32.3 223 60-285 57-314 (345)
32 1nr0_A Actin interacting prote 100.0 7.6E-37 2.6E-41 271.5 33.7 233 54-286 137-503 (611)
33 2xzm_R RACK1; ribosome, transl 100.0 1.6E-36 5.4E-41 251.2 33.2 223 55-285 67-320 (343)
34 3jrp_A Fusion protein of prote 100.0 8E-37 2.7E-41 255.2 31.2 227 55-285 2-267 (379)
35 3iz6_a 40S ribosomal protein R 100.0 9.8E-38 3.3E-42 262.0 25.6 216 55-270 148-378 (380)
36 4aow_A Guanine nucleotide-bind 100.0 4.1E-36 1.4E-40 247.6 34.5 228 55-285 29-267 (340)
37 1erj_A Transcriptional repress 100.0 2.2E-36 7.4E-41 254.9 32.8 205 61-268 61-288 (393)
38 3dwl_C Actin-related protein 2 100.0 1.3E-38 4.6E-43 266.5 18.8 223 58-285 5-262 (377)
39 4e54_B DNA damage-binding prot 100.0 1.1E-37 3.7E-42 266.2 23.9 218 56-274 111-334 (435)
40 2pm7_B Protein transport prote 100.0 2.6E-36 8.7E-41 245.1 30.3 213 55-267 44-285 (297)
41 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-36 1.5E-40 250.5 32.4 224 59-286 3-256 (372)
42 1gxr_A ESG1, transducin-like e 100.0 4.2E-35 1.4E-39 241.0 36.6 218 62-285 95-317 (337)
43 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-36 1.7E-40 253.4 31.4 230 55-286 72-325 (402)
44 3mmy_A MRNA export factor; mRN 100.0 9.2E-36 3.1E-40 247.7 31.5 236 50-286 25-327 (368)
45 2ymu_A WD-40 repeat protein; u 100.0 1.7E-35 5.9E-40 260.8 34.8 224 53-285 333-560 (577)
46 3dm0_A Maltose-binding peripla 100.0 1E-35 3.4E-40 268.1 33.8 214 55-274 421-639 (694)
47 1gxr_A ESG1, transducin-like e 100.0 2E-35 6.9E-40 242.9 32.5 222 58-285 45-276 (337)
48 3mkq_A Coatomer beta'-subunit; 100.0 8.3E-36 2.8E-40 272.8 32.9 229 54-285 3-239 (814)
49 3ei3_B DNA damage-binding prot 100.0 1E-35 3.5E-40 249.7 30.8 216 53-274 62-289 (383)
50 2xyi_A Probable histone-bindin 100.0 5.8E-36 2E-40 255.1 27.7 226 57-285 121-389 (430)
51 2ymu_A WD-40 repeat protein; u 100.0 1.8E-35 6.3E-40 260.7 31.3 205 52-264 373-577 (577)
52 3vl1_A 26S proteasome regulato 100.0 1.1E-35 3.7E-40 252.3 27.3 229 54-286 129-397 (420)
53 1sq9_A Antiviral protein SKI8; 100.0 2.7E-35 9.1E-40 248.0 27.3 220 54-275 52-330 (397)
54 3vl1_A 26S proteasome regulato 100.0 2.4E-35 8.2E-40 250.1 26.8 206 66-274 99-330 (420)
55 1r5m_A SIR4-interacting protei 100.0 1.8E-34 6.1E-39 244.4 32.1 220 60-285 41-341 (425)
56 3bg1_A Protein SEC13 homolog; 100.0 8.2E-36 2.8E-40 244.2 22.4 208 56-266 49-292 (316)
57 1sq9_A Antiviral protein SKI8; 100.0 3.1E-35 1.1E-39 247.6 25.8 218 55-276 7-276 (397)
58 3gre_A Serine/threonine-protei 100.0 1.9E-35 6.5E-40 252.2 24.6 222 51-275 49-300 (437)
59 3sfz_A APAF-1, apoptotic pepti 100.0 3.1E-34 1E-38 273.3 35.4 231 54-285 605-893 (1249)
60 4h5i_A Guanine nucleotide-exch 100.0 1.1E-34 3.6E-39 242.1 28.4 201 63-268 132-344 (365)
61 4aez_A CDC20, WD repeat-contai 100.0 4.4E-34 1.5E-38 241.4 32.3 224 55-285 124-360 (401)
62 3zwl_B Eukaryotic translation 100.0 1.1E-33 3.8E-38 235.2 34.2 228 52-285 62-326 (369)
63 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-34 6E-39 265.7 31.9 211 58-273 11-248 (902)
64 3v7d_B Cell division control p 100.0 5.7E-34 1.9E-38 244.9 32.9 225 54-287 111-365 (464)
65 3jrp_A Fusion protein of prote 100.0 2.7E-34 9.4E-39 239.9 29.5 219 54-272 45-292 (379)
66 3k26_A Polycomb protein EED; W 100.0 1.8E-35 6.1E-40 246.0 21.9 212 53-267 104-366 (366)
67 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-33 4.5E-38 229.9 32.5 223 52-285 6-236 (313)
68 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-34 7.6E-39 263.3 31.1 228 54-285 45-281 (814)
69 3k26_A Polycomb protein EED; W 100.0 5.8E-35 2E-39 242.8 24.5 218 63-285 68-346 (366)
70 3dw8_B Serine/threonine-protei 100.0 5.3E-35 1.8E-39 249.9 24.7 212 63-277 27-326 (447)
71 1r5m_A SIR4-interacting protei 100.0 2.9E-34 9.9E-39 243.2 29.0 228 52-285 137-405 (425)
72 3i2n_A WD repeat-containing pr 100.0 6.6E-35 2.3E-39 241.8 24.4 229 53-285 7-270 (357)
73 2pm9_A Protein WEB1, protein t 100.0 6.6E-35 2.3E-39 246.9 24.4 220 62-285 65-316 (416)
74 3v7d_B Cell division control p 100.0 2E-33 7E-38 241.4 34.0 224 53-285 151-402 (464)
75 1k8k_C P40, ARP2/3 complex 41 100.0 6.4E-34 2.2E-38 237.3 29.8 207 56-267 44-274 (372)
76 2pm9_A Protein WEB1, protein t 100.0 2.4E-35 8.4E-40 249.6 21.4 213 55-270 104-340 (416)
77 2j04_B YDR362CP, TAU91; beta p 100.0 3.6E-35 1.2E-39 254.7 22.8 207 58-268 201-429 (524)
78 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.1E-34 2.1E-38 244.0 29.5 227 58-286 96-366 (450)
79 3jro_A Fusion protein of prote 100.0 8E-35 2.7E-39 264.1 25.1 225 57-285 2-265 (753)
80 3dwl_C Actin-related protein 2 100.0 2.7E-35 9.4E-40 246.4 20.2 206 55-266 46-280 (377)
81 4a11_B DNA excision repair pro 100.0 3.4E-33 1.2E-37 235.4 33.2 216 54-270 33-279 (408)
82 3ei3_B DNA damage-binding prot 100.0 9.2E-34 3.1E-38 237.8 29.3 220 61-285 115-363 (383)
83 3dw8_B Serine/threonine-protei 100.0 5.2E-34 1.8E-38 243.7 26.7 216 55-272 72-378 (447)
84 3i2n_A WD repeat-containing pr 100.0 7.9E-34 2.7E-38 235.3 26.0 225 60-285 61-332 (357)
85 4aez_A CDC20, WD repeat-contai 100.0 3.8E-33 1.3E-37 235.7 30.1 227 52-286 77-315 (401)
86 2xyi_A Probable histone-bindin 100.0 3.2E-33 1.1E-37 238.2 29.2 212 54-268 171-411 (430)
87 3odt_A Protein DOA1; ubiquitin 100.0 1.4E-32 4.6E-37 223.9 31.0 220 54-285 49-277 (313)
88 4gga_A P55CDC, cell division c 100.0 9E-33 3.1E-37 234.7 30.7 209 61-274 144-402 (420)
89 1yfq_A Cell cycle arrest prote 100.0 1.5E-33 5.2E-38 232.5 24.9 221 58-286 5-263 (342)
90 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-33 6.5E-38 237.5 26.0 216 67-285 37-278 (402)
91 4aow_A Guanine nucleotide-bind 100.0 6.8E-32 2.3E-36 222.3 34.5 226 54-285 76-317 (340)
92 2j04_B YDR362CP, TAU91; beta p 100.0 5.1E-34 1.8E-38 247.5 21.4 229 54-285 124-408 (524)
93 1yfq_A Cell cycle arrest prote 100.0 5.3E-33 1.8E-37 229.3 26.2 215 57-277 49-292 (342)
94 4a11_B DNA excision repair pro 100.0 3.3E-32 1.1E-36 229.5 31.0 210 61-274 96-372 (408)
95 3gre_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 238.6 24.9 212 62-275 109-367 (437)
96 1pgu_A Actin interacting prote 100.0 3.6E-32 1.2E-36 241.0 32.6 217 55-274 54-290 (615)
97 4e54_B DNA damage-binding prot 100.0 2.7E-33 9.3E-38 239.0 23.7 229 56-285 156-411 (435)
98 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.5E-31 5.2E-36 228.7 33.6 221 54-285 189-418 (445)
99 1pgu_A Actin interacting prote 100.0 1.2E-32 4.2E-37 244.0 27.7 206 62-274 16-245 (615)
100 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-32 9E-37 232.9 28.4 218 53-284 162-395 (435)
101 4ggc_A P55CDC, cell division c 100.0 1.6E-31 5.6E-36 218.1 31.7 212 53-269 54-317 (318)
102 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-31 6.8E-36 228.0 33.4 221 53-287 148-375 (445)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.4E-32 1.2E-36 233.2 28.0 205 65-274 5-278 (450)
104 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-31 5.9E-36 227.8 31.8 214 57-284 126-346 (435)
105 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-31 5.4E-36 254.6 34.2 212 52-267 645-913 (1249)
106 3lrv_A PRE-mRNA-splicing facto 100.0 9.9E-33 3.4E-37 228.4 22.4 202 64-270 76-295 (343)
107 3jro_A Fusion protein of prote 100.0 9.6E-33 3.3E-37 250.4 23.8 216 54-269 43-287 (753)
108 2w18_A PALB2, fancn, partner a 100.0 4.8E-32 1.7E-36 218.2 24.9 176 86-266 156-356 (356)
109 4h5i_A Guanine nucleotide-exch 100.0 7.7E-32 2.6E-36 224.8 26.5 173 109-286 135-324 (365)
110 3vu4_A KMHSV2; beta-propeller 100.0 2.7E-31 9.3E-36 220.8 26.9 209 54-269 9-273 (355)
111 4gq1_A NUP37; propeller, trans 100.0 2.4E-32 8.1E-37 230.2 20.8 211 76-286 100-371 (393)
112 4ggc_A P55CDC, cell division c 100.0 4.3E-30 1.5E-34 209.6 31.4 228 51-285 8-295 (318)
113 3mmy_A MRNA export factor; mRN 100.0 2.6E-31 8.8E-36 220.8 24.1 204 58-266 80-345 (368)
114 4gga_A P55CDC, cell division c 100.0 8E-30 2.7E-34 216.6 33.7 227 52-285 89-375 (420)
115 2j04_A TAU60, YPL007P, hypothe 100.0 5.6E-31 1.9E-35 224.9 25.3 192 62-266 83-296 (588)
116 3lrv_A PRE-mRNA-splicing facto 100.0 7.3E-32 2.5E-36 223.1 18.6 202 76-285 47-271 (343)
117 2j04_A TAU60, YPL007P, hypothe 100.0 4.7E-31 1.6E-35 225.4 23.7 211 62-285 13-278 (588)
118 4gq1_A NUP37; propeller, trans 100.0 1.7E-31 5.9E-36 224.9 20.6 206 57-266 129-388 (393)
119 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-31 5.9E-36 245.8 20.8 222 59-284 430-749 (902)
120 1l0q_A Surface layer protein; 100.0 7.6E-29 2.6E-33 208.3 34.0 224 54-285 22-254 (391)
121 3bws_A Protein LP49; two-domai 100.0 9.8E-29 3.4E-33 210.3 30.7 220 59-285 164-411 (433)
122 3vu4_A KMHSV2; beta-propeller 100.0 9.1E-29 3.1E-33 205.5 26.7 202 66-268 60-337 (355)
123 3bws_A Protein LP49; two-domai 100.0 1.2E-28 4.1E-33 209.8 28.1 223 56-285 115-355 (433)
124 3f3f_A Nucleoporin SEH1; struc 100.0 1E-28 3.5E-33 203.3 25.7 168 101-268 5-250 (351)
125 1l0q_A Surface layer protein; 100.0 1.7E-27 5.8E-32 200.0 33.6 213 54-274 64-282 (391)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.5E-27 1.5E-31 199.3 29.7 221 54-284 168-407 (415)
127 2w18_A PALB2, fancn, partner a 100.0 1.2E-26 4.1E-31 187.0 26.7 228 55-285 26-337 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.1E-26 1.8E-30 192.8 22.5 221 58-285 111-364 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 3.5E-26 1.2E-30 194.6 19.0 200 65-268 37-279 (434)
130 2ojh_A Uncharacterized protein 99.9 5E-25 1.7E-29 177.3 21.5 224 55-285 32-282 (297)
131 3vgz_A Uncharacterized protein 99.9 1.7E-23 5.8E-28 173.0 31.0 225 55-285 80-324 (353)
132 3vgz_A Uncharacterized protein 99.9 5E-23 1.7E-27 170.2 29.3 221 63-285 39-282 (353)
133 1pby_B Quinohemoprotein amine 99.9 4.2E-23 1.4E-27 169.4 26.1 200 66-274 35-317 (337)
134 2ecf_A Dipeptidyl peptidase IV 99.9 6.1E-24 2.1E-28 192.6 22.9 217 64-285 36-347 (741)
135 1nir_A Nitrite reductase; hemo 99.9 2.8E-22 9.6E-27 175.0 31.1 228 53-285 168-431 (543)
136 3u4y_A Uncharacterized protein 99.9 2E-22 6.8E-27 165.3 28.2 211 54-270 30-255 (331)
137 3u4y_A Uncharacterized protein 99.9 1.3E-22 4.5E-27 166.4 27.1 213 71-285 4-231 (331)
138 1ri6_A Putative isomerase YBHE 99.9 1.5E-22 5.2E-27 166.5 25.2 222 61-285 34-287 (343)
139 1nir_A Nitrite reductase; hemo 99.9 1.2E-22 4.2E-27 177.3 25.6 196 72-274 145-362 (543)
140 2oit_A Nucleoporin 214KDA; NH2 99.9 7.4E-23 2.5E-27 174.1 22.6 203 62-266 90-332 (434)
141 1xfd_A DIP, dipeptidyl aminope 99.9 4.9E-24 1.7E-28 192.7 15.9 216 66-285 18-316 (723)
142 1ri6_A Putative isomerase YBHE 99.9 1.1E-21 3.6E-26 161.4 27.4 221 58-285 78-333 (343)
143 1jmx_B Amine dehydrogenase; ox 99.9 7.1E-22 2.4E-26 162.9 24.1 210 55-274 32-332 (349)
144 2ecf_A Dipeptidyl peptidase IV 99.9 2.7E-22 9.2E-27 181.8 21.3 215 66-285 110-390 (741)
145 1pby_B Quinohemoprotein amine 99.9 2.7E-21 9.2E-26 158.6 24.6 203 78-285 2-290 (337)
146 2z3z_A Dipeptidyl aminopeptida 99.9 5.5E-22 1.9E-26 178.9 22.2 216 65-285 82-366 (706)
147 1jmx_B Amine dehydrogenase; ox 99.9 1.9E-21 6.4E-26 160.4 23.1 210 69-285 4-305 (349)
148 3hfq_A Uncharacterized protein 99.9 1E-20 3.6E-25 156.3 27.0 224 61-285 36-296 (347)
149 2z3z_A Dipeptidyl aminopeptida 99.9 7.6E-22 2.6E-26 178.0 21.6 225 56-285 112-411 (706)
150 3hfq_A Uncharacterized protein 99.9 1.7E-20 5.7E-25 155.0 27.5 213 57-273 78-325 (347)
151 1xfd_A DIP, dipeptidyl aminope 99.9 5.2E-22 1.8E-26 179.5 19.8 211 54-269 47-347 (723)
152 2ojh_A Uncharacterized protein 99.9 3.2E-21 1.1E-25 154.9 22.0 196 82-285 17-227 (297)
153 1k32_A Tricorn protease; prote 99.9 1.9E-21 6.3E-26 182.5 22.4 219 56-285 237-482 (1045)
154 3scy_A Hypothetical bacterial 99.9 1.8E-19 6.2E-24 149.6 30.3 220 63-285 48-316 (361)
155 3scy_A Hypothetical bacterial 99.9 2.4E-19 8.2E-24 148.9 29.4 218 60-283 95-360 (361)
156 3o4h_A Acylamino-acid-releasin 99.9 3.5E-21 1.2E-25 170.0 18.6 199 64-274 21-233 (582)
157 1k32_A Tricorn protease; prote 99.9 4E-20 1.4E-24 173.5 26.4 225 57-285 329-618 (1045)
158 3o4h_A Acylamino-acid-releasin 99.9 1.8E-20 6.3E-25 165.4 19.7 213 57-283 56-291 (582)
159 1z68_A Fibroblast activation p 99.9 1E-21 3.6E-26 177.5 10.5 201 69-273 20-297 (719)
160 3pe7_A Oligogalacturonate lyas 99.9 1.7E-19 6E-24 151.0 23.4 215 54-272 20-278 (388)
161 1jof_A Carboxy-CIS,CIS-muconat 99.9 3E-19 1E-23 148.7 23.8 220 63-284 38-316 (365)
162 3fvz_A Peptidyl-glycine alpha- 99.8 3.6E-18 1.2E-22 140.2 28.5 218 64-285 23-302 (329)
163 4a5s_A Dipeptidyl peptidase 4 99.8 1.1E-19 3.6E-24 164.8 18.0 199 66-269 18-296 (740)
164 2oiz_A Aromatic amine dehydrog 99.8 4.5E-18 1.5E-22 141.3 25.2 220 55-285 42-358 (361)
165 1q7f_A NHL, brain tumor CG1071 99.8 1.1E-16 3.7E-21 128.5 31.0 217 62-285 27-261 (286)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.5E-18 1.6E-22 141.6 23.5 198 67-268 85-342 (365)
167 1z68_A Fibroblast activation p 99.8 6.2E-20 2.1E-24 165.9 13.2 212 54-271 46-350 (719)
168 1q7f_A NHL, brain tumor CG1071 99.8 9.2E-17 3.1E-21 129.0 28.4 201 63-269 75-282 (286)
169 3e5z_A Putative gluconolactona 99.8 7.4E-17 2.5E-21 130.2 27.3 221 53-283 16-264 (296)
170 3fvz_A Peptidyl-glycine alpha- 99.8 6.9E-17 2.4E-21 132.5 27.2 203 62-267 88-322 (329)
171 2dg1_A DRP35, lactonase; beta 99.8 2.8E-16 9.5E-21 128.9 30.8 228 54-285 34-290 (333)
172 3azo_A Aminopeptidase; POP fam 99.8 8E-18 2.7E-22 150.7 22.8 214 57-274 60-331 (662)
173 3no2_A Uncharacterized protein 99.8 2.7E-17 9.3E-22 131.4 23.2 189 77-274 5-202 (276)
174 3azo_A Aminopeptidase; POP fam 99.8 5.3E-18 1.8E-22 151.8 20.7 212 57-274 16-281 (662)
175 3pe7_A Oligogalacturonate lyas 99.8 5.4E-18 1.8E-22 141.9 17.8 227 55-285 71-361 (388)
176 3c5m_A Oligogalacturonate lyas 99.8 2.4E-18 8E-23 144.3 14.8 213 67-284 38-291 (396)
177 2xdw_A Prolyl endopeptidase; a 99.8 2.4E-16 8.2E-21 142.3 26.3 209 62-274 122-375 (710)
178 2gop_A Trilobed protease; beta 99.8 1.4E-16 4.7E-21 131.3 22.4 200 65-284 59-311 (347)
179 4a5s_A Dipeptidyl peptidase 4 99.8 2.4E-17 8.2E-22 149.4 19.3 215 54-274 46-360 (740)
180 3dsm_A Uncharacterized protein 99.7 2.8E-15 9.4E-20 122.9 26.1 221 54-283 74-320 (328)
181 1rwi_B Serine/threonine-protei 99.7 2.2E-15 7.6E-20 119.7 24.3 215 66-285 25-244 (270)
182 3c5m_A Oligogalacturonate lyas 99.7 5.6E-17 1.9E-21 135.9 15.6 197 68-272 84-334 (396)
183 1xip_A Nucleoporin NUP159; bet 99.7 2.3E-16 7.8E-21 130.7 18.6 174 66-254 39-231 (388)
184 2dg1_A DRP35, lactonase; beta 99.7 6.1E-16 2.1E-20 126.8 21.1 195 65-267 6-213 (333)
185 3dsm_A Uncharacterized protein 99.7 3.6E-15 1.2E-19 122.2 24.9 211 65-284 44-276 (328)
186 3e5z_A Putative gluconolactona 99.7 1.5E-14 5E-19 116.7 27.2 203 57-270 61-289 (296)
187 1rwi_B Serine/threonine-protei 99.7 2.5E-15 8.5E-20 119.4 22.2 201 65-270 67-267 (270)
188 3no2_A Uncharacterized protein 99.7 1.1E-14 3.8E-19 116.2 25.6 215 53-274 24-259 (276)
189 3g4e_A Regucalcin; six bladed 99.7 8E-14 2.7E-18 112.5 30.9 221 59-285 7-252 (297)
190 2z2n_A Virginiamycin B lyase; 99.7 3.4E-13 1.2E-17 108.4 33.1 217 60-285 10-235 (299)
191 1qks_A Cytochrome CD1 nitrite 99.7 3.1E-14 1E-18 124.4 28.5 195 76-274 166-380 (567)
192 2bkl_A Prolyl endopeptidase; m 99.7 2.3E-15 8E-20 135.5 20.8 207 62-274 118-357 (695)
193 2oiz_A Aromatic amine dehydrog 99.7 1.6E-14 5.4E-19 119.9 23.0 196 85-285 29-315 (361)
194 2z2n_A Virginiamycin B lyase; 99.7 1.7E-12 6E-17 104.2 32.9 202 63-271 55-258 (299)
195 2gop_A Trilobed protease; beta 99.7 2E-14 6.9E-19 118.4 21.9 184 67-270 106-333 (347)
196 3hrp_A Uncharacterized protein 99.7 2.5E-13 8.4E-18 114.5 28.6 204 65-273 131-360 (409)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.5E-13 5.2E-18 111.4 26.5 221 60-285 13-278 (314)
198 2mad_H Methylamine dehydrogena 99.7 5.6E-13 1.9E-17 110.9 29.6 207 56-274 59-357 (373)
199 2ghs_A AGR_C_1268P; regucalcin 99.6 2.8E-12 9.7E-17 104.8 32.2 218 60-285 44-282 (326)
200 2xdw_A Prolyl endopeptidase; a 99.6 5.9E-14 2E-18 126.7 22.8 198 67-269 173-416 (710)
201 1yr2_A Prolyl oligopeptidase; 99.6 7.5E-14 2.6E-18 126.6 23.5 205 63-274 161-401 (741)
202 3dr2_A Exported gluconolactona 99.6 4E-13 1.4E-17 108.8 24.9 222 54-285 34-287 (305)
203 3c75_H MADH, methylamine dehyd 99.6 6.8E-14 2.3E-18 117.4 20.5 193 87-285 99-423 (426)
204 1qks_A Cytochrome CD1 nitrite 99.6 6.7E-12 2.3E-16 109.7 33.5 216 55-274 188-435 (567)
205 2qc5_A Streptogramin B lactona 99.6 1.4E-11 4.9E-16 98.9 33.0 216 62-285 17-240 (300)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.4E-12 4.6E-17 105.8 26.7 198 63-267 69-299 (314)
207 1xip_A Nucleoporin NUP159; bet 99.6 3.2E-14 1.1E-18 117.9 17.1 149 109-274 39-200 (388)
208 2qc5_A Streptogramin B lactona 99.6 1.6E-11 5.3E-16 98.6 30.9 202 63-272 60-264 (300)
209 2mad_H Methylamine dehydrogena 99.6 9.2E-12 3.1E-16 103.6 28.4 202 76-285 31-328 (373)
210 2hz6_A Endoplasmic reticulum t 99.6 6.1E-16 2.1E-20 128.8 2.2 187 76-274 8-199 (369)
211 3g4e_A Regucalcin; six bladed 99.5 9.5E-12 3.2E-16 100.3 25.9 186 63-256 52-261 (297)
212 2bkl_A Prolyl endopeptidase; m 99.5 3.8E-13 1.3E-17 121.1 18.9 198 68-271 171-401 (695)
213 2qe8_A Uncharacterized protein 99.5 5.2E-12 1.8E-16 104.0 22.7 215 65-285 17-301 (343)
214 1mda_H Methylamine dehydrogena 99.5 2.2E-12 7.6E-17 106.5 20.2 199 79-283 34-365 (368)
215 3sjl_D Methylamine dehydrogena 99.5 5.9E-12 2E-16 104.0 22.5 210 67-285 139-384 (386)
216 3iuj_A Prolyl endopeptidase; h 99.5 2.6E-12 9E-17 115.6 21.5 201 62-271 126-363 (693)
217 1npe_A Nidogen, entactin; glyc 99.5 4E-10 1.4E-14 89.3 31.1 215 65-285 36-261 (267)
218 3hrp_A Uncharacterized protein 99.5 3.4E-11 1.2E-15 101.5 26.0 192 70-265 176-408 (409)
219 1yr2_A Prolyl oligopeptidase; 99.5 3.1E-12 1.1E-16 116.0 20.4 197 68-270 212-444 (741)
220 2ghs_A AGR_C_1268P; regucalcin 99.4 1.8E-10 6.1E-15 94.1 26.4 183 64-256 89-291 (326)
221 3dr2_A Exported gluconolactona 99.4 4.2E-11 1.4E-15 96.9 22.2 196 57-264 78-303 (305)
222 2ece_A 462AA long hypothetical 99.4 9E-11 3.1E-15 97.8 23.1 200 74-274 93-362 (462)
223 2qe8_A Uncharacterized protein 99.4 7E-11 2.4E-15 97.2 22.0 197 62-261 64-315 (343)
224 2iwa_A Glutamine cyclotransfer 99.4 9.6E-11 3.3E-15 91.8 21.5 197 67-269 23-239 (266)
225 3sjl_D Methylamine dehydrogena 99.4 1E-10 3.5E-15 96.6 22.3 191 72-269 40-258 (386)
226 1kb0_A Quinohemoprotein alcoho 99.4 8.1E-11 2.8E-15 105.3 22.1 185 86-274 189-514 (677)
227 1yiq_A Quinohemoprotein alcoho 99.4 1.5E-10 5.1E-15 103.8 22.8 185 86-274 182-512 (689)
228 3nol_A Glutamine cyclotransfer 99.3 1.2E-09 4.2E-14 84.7 23.2 188 62-256 38-244 (262)
229 2ece_A 462AA long hypothetical 99.3 1.5E-09 5.3E-14 90.5 24.7 187 67-255 140-399 (462)
230 2iwa_A Glutamine cyclotransfer 99.3 1.9E-09 6.4E-14 84.5 22.8 183 98-285 10-216 (266)
231 3nok_A Glutaminyl cyclase; bet 99.3 2.7E-09 9.4E-14 82.7 21.9 181 67-255 57-253 (268)
232 3mbr_X Glutamine cyclotransfer 99.3 9.3E-09 3.2E-13 79.1 24.5 187 62-255 16-222 (243)
233 3nol_A Glutamine cyclotransfer 99.3 3E-09 1E-13 82.5 21.0 180 98-285 32-235 (262)
234 3iuj_A Prolyl endopeptidase; h 99.3 1.5E-09 5.1E-14 97.7 22.2 197 68-272 178-410 (693)
235 3nok_A Glutaminyl cyclase; bet 99.2 8.7E-09 3E-13 79.9 21.7 169 98-274 44-217 (268)
236 3q7m_A Lipoprotein YFGL, BAMB; 99.2 9.5E-09 3.3E-13 85.4 23.6 192 78-274 54-265 (376)
237 1fwx_A Nitrous oxide reductase 99.2 1.1E-09 3.9E-14 94.3 18.1 193 76-274 101-378 (595)
238 2hz6_A Endoplasmic reticulum t 99.2 1.2E-12 4.1E-17 108.9 -0.6 147 118-274 8-156 (369)
239 3qqz_A Putative uncharacterize 99.2 6.2E-08 2.1E-12 75.5 25.7 205 59-266 21-252 (255)
240 3mbr_X Glutamine cyclotransfer 99.2 2.7E-08 9.2E-13 76.5 23.2 170 98-274 10-186 (243)
241 1fwx_A Nitrous oxide reductase 99.2 5.9E-09 2E-13 89.9 21.5 203 78-285 16-341 (595)
242 3q7m_A Lipoprotein YFGL, BAMB; 99.2 2E-08 6.9E-13 83.4 23.6 186 78-274 104-303 (376)
243 1npe_A Nidogen, entactin; glyc 99.2 1.7E-07 5.9E-12 74.0 27.7 189 80-272 4-203 (267)
244 3v64_C Agrin; beta propeller, 99.2 4.2E-07 1.4E-11 74.8 30.8 207 64-274 72-282 (349)
245 3v65_B Low-density lipoprotein 99.2 2.9E-07 9.8E-12 76.8 30.0 207 64-274 115-325 (386)
246 1kb0_A Quinohemoprotein alcoho 99.1 6.3E-09 2.2E-13 93.1 20.8 182 68-253 246-536 (677)
247 3hxj_A Pyrrolo-quinoline quino 99.1 4.9E-09 1.7E-13 85.3 18.4 183 78-274 108-290 (330)
248 1ijq_A LDL receptor, low-densi 99.1 7.5E-07 2.6E-11 72.2 30.6 208 64-274 29-245 (316)
249 1kv9_A Type II quinohemoprotei 99.1 1.9E-08 6.6E-13 89.9 23.1 185 86-274 177-495 (668)
250 1mda_H Methylamine dehydrogena 99.1 2.6E-09 8.8E-14 88.2 15.9 186 53-246 55-366 (368)
251 1yiq_A Quinohemoprotein alcoho 99.1 5.8E-09 2E-13 93.5 19.1 195 78-274 71-345 (689)
252 3p5b_L Low density lipoprotein 99.1 2.5E-06 8.7E-11 71.4 33.9 210 63-274 110-327 (400)
253 3hxj_A Pyrrolo-quinoline quino 99.1 7.6E-09 2.6E-13 84.2 17.6 196 57-267 129-324 (330)
254 2ad6_A Methanol dehydrogenase 99.1 4.3E-08 1.5E-12 86.0 22.9 184 86-274 175-501 (571)
255 2fp8_A Strictosidine synthase; 99.1 1.7E-07 5.8E-12 76.2 24.6 207 60-274 14-275 (322)
256 3c75_H MADH, methylamine dehyd 99.1 7.8E-09 2.7E-13 86.8 16.6 146 117-271 82-252 (426)
257 2p4o_A Hypothetical protein; p 99.0 3.6E-06 1.2E-10 67.8 30.4 209 65-283 32-263 (306)
258 1w6s_A Methanol dehydrogenase 99.0 1.2E-07 4.1E-12 83.3 22.6 186 85-274 180-510 (599)
259 1flg_A Protein (quinoprotein e 99.0 1.8E-07 6E-12 82.2 22.4 141 129-274 291-523 (582)
260 2fp8_A Strictosidine synthase; 98.9 1.5E-06 5.2E-11 70.5 24.7 197 66-268 81-314 (322)
261 1kv9_A Type II quinohemoprotei 98.9 1.4E-07 4.9E-12 84.3 20.1 193 79-274 68-340 (668)
262 3sov_A LRP-6, low-density lipo 98.9 4.9E-06 1.7E-10 67.4 26.9 205 66-274 36-245 (318)
263 3v64_C Agrin; beta propeller, 98.9 7.5E-06 2.6E-10 67.3 27.9 213 65-284 34-255 (349)
264 3m0c_C LDL receptor, low-densi 98.9 1.3E-05 4.5E-10 72.6 31.2 210 63-274 422-639 (791)
265 3amr_A 3-phytase; beta-propell 98.9 5.1E-06 1.7E-10 67.2 25.6 192 77-274 40-271 (355)
266 3v65_B Low-density lipoprotein 98.9 6.7E-06 2.3E-10 68.5 27.0 211 68-285 80-299 (386)
267 1ijq_A LDL receptor, low-densi 98.9 1.8E-05 6.2E-10 64.0 30.5 178 87-268 10-196 (316)
268 2xe4_A Oligopeptidase B; hydro 98.9 4.8E-07 1.6E-11 82.1 21.1 192 66-265 175-398 (751)
269 3qqz_A Putative uncharacterize 98.8 5.2E-06 1.8E-10 64.6 22.9 182 102-285 21-234 (255)
270 1w6s_A Methanol dehydrogenase 98.8 2.4E-06 8.4E-11 75.1 22.6 193 79-274 64-349 (599)
271 3p5b_L Low density lipoprotein 98.8 4.9E-05 1.7E-09 63.6 29.2 180 87-270 92-280 (400)
272 2ad6_A Methanol dehydrogenase 98.8 3.6E-06 1.2E-10 73.8 22.7 150 78-230 116-343 (571)
273 4a2l_A BT_4663, two-component 98.7 3.1E-05 1.1E-09 70.8 29.7 199 64-272 356-576 (795)
274 3tc9_A Hypothetical hydrolase; 98.7 9.4E-06 3.2E-10 68.6 24.3 202 66-272 138-375 (430)
275 2p9w_A MAL S 1 allergenic prot 98.7 3.4E-05 1.2E-09 61.9 24.8 207 60-267 8-265 (334)
276 4a2l_A BT_4663, two-component 98.7 4.4E-05 1.5E-09 69.8 29.1 196 64-271 405-618 (795)
277 1n7d_A LDL receptor, low-densi 98.7 1.8E-07 6E-12 84.1 12.9 207 66-274 407-621 (699)
278 3sov_A LRP-6, low-density lipo 98.7 4.8E-05 1.6E-09 61.6 25.6 179 87-269 13-199 (318)
279 3m0c_C LDL receptor, low-densi 98.7 7.3E-05 2.5E-09 67.8 28.7 183 87-273 404-595 (791)
280 4hw6_A Hypothetical protein, I 98.6 1.9E-05 6.6E-10 66.8 23.0 202 66-272 140-378 (433)
281 1flg_A Protein (quinoprotein e 98.6 2.1E-05 7.2E-10 69.1 23.5 195 76-274 68-362 (582)
282 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00018 6.3E-09 63.7 29.2 204 65-274 37-244 (628)
283 3v9f_A Two-component system se 98.6 4.4E-05 1.5E-09 69.6 25.4 199 65-271 363-572 (781)
284 2p9w_A MAL S 1 allergenic prot 98.6 2.6E-05 9E-10 62.5 20.4 157 111-268 16-216 (334)
285 3s94_A LRP-6, low-density lipo 98.6 7.6E-05 2.6E-09 66.1 25.2 207 64-274 39-250 (619)
286 3tc9_A Hypothetical hydrolase; 98.5 9.7E-06 3.3E-10 68.6 18.8 152 110-266 139-300 (430)
287 2xbg_A YCF48-like protein; pho 98.5 0.00019 6.4E-09 58.3 25.7 193 65-265 122-320 (327)
288 1k3i_A Galactose oxidase precu 98.5 7.3E-06 2.5E-10 73.3 18.4 114 69-182 190-325 (656)
289 3kya_A Putative phosphatase; s 98.5 6.9E-05 2.4E-09 63.9 23.2 204 66-271 140-413 (496)
290 3v9f_A Two-component system se 98.5 0.00013 4.5E-09 66.5 26.2 198 64-271 406-615 (781)
291 2p4o_A Hypothetical protein; p 98.5 0.00018 6E-09 57.8 23.5 187 65-257 72-278 (306)
292 4a0p_A LRP6, LRP-6, low-densit 98.5 0.00068 2.3E-08 60.1 29.4 205 65-274 340-556 (628)
293 2xe4_A Oligopeptidase B; hydro 98.5 5E-06 1.7E-10 75.4 15.5 154 109-267 175-354 (751)
294 4hw6_A Hypothetical protein, I 98.4 0.00041 1.4E-08 58.6 25.4 200 63-266 180-432 (433)
295 1k3i_A Galactose oxidase precu 98.3 0.00012 4.1E-09 65.4 21.1 188 67-256 245-530 (656)
296 3s94_A LRP-6, low-density lipo 98.3 0.0016 5.4E-08 57.6 28.7 202 65-270 349-554 (619)
297 2xzh_A Clathrin heavy chain 1; 98.3 0.00082 2.8E-08 53.7 25.5 199 70-274 72-297 (365)
298 1bpo_A Protein (clathrin); cla 98.3 0.0012 4.1E-08 54.8 23.7 199 70-274 71-296 (494)
299 3amr_A 3-phytase; beta-propell 98.2 0.00036 1.2E-08 56.5 19.6 156 119-282 40-236 (355)
300 1n7d_A LDL receptor, low-densi 98.2 6.4E-06 2.2E-10 74.0 10.3 180 87-270 386-574 (699)
301 3pbp_A Nucleoporin NUP82; beta 98.2 0.0006 2.1E-08 56.5 19.7 146 116-263 29-208 (452)
302 2vpj_A Kelch-like protein 12; 98.1 0.00024 8.3E-09 56.7 16.3 187 76-271 62-282 (301)
303 3kya_A Putative phosphatase; s 98.1 0.0038 1.3E-07 53.3 25.3 205 66-273 187-481 (496)
304 2xn4_A Kelch-like protein 2; s 98.1 0.00028 9.4E-09 56.5 16.2 188 76-272 61-281 (302)
305 2xbg_A YCF48-like protein; pho 98.1 0.0029 9.8E-08 51.3 24.5 198 64-272 79-283 (327)
306 3ii7_A Kelch-like protein 7; p 98.0 0.00071 2.4E-08 54.2 18.3 187 76-271 55-276 (306)
307 3sre_A PON1, serum paraoxonase 98.0 0.0042 1.4E-07 50.8 23.7 192 58-257 43-287 (355)
308 2vpj_A Kelch-like protein 12; 97.9 0.0012 4.1E-08 52.7 17.3 188 76-272 14-236 (301)
309 2ism_A Putative oxidoreductase 97.9 0.0067 2.3E-07 49.7 25.2 217 59-286 25-326 (352)
310 3ii7_A Kelch-like protein 7; p 97.9 0.0025 8.4E-08 51.0 18.5 186 77-271 12-229 (306)
311 1tl2_A L10, protein (tachylect 97.8 0.0039 1.3E-07 46.9 17.4 175 76-261 3-204 (236)
312 3pbp_A Nucleoporin NUP82; beta 97.8 0.0027 9.2E-08 52.7 17.5 140 76-218 31-208 (452)
313 4asc_A Kelch repeat and BTB do 97.8 0.0017 5.7E-08 52.2 16.0 189 76-273 45-283 (315)
314 2be1_A Serine/threonine-protei 97.8 0.00024 8E-09 57.7 10.8 191 78-272 11-236 (339)
315 2xn4_A Kelch-like protein 2; s 97.7 0.0015 5E-08 52.2 15.1 187 77-272 16-234 (302)
316 1zgk_A Kelch-like ECH-associat 97.7 0.0012 4.2E-08 52.8 13.5 188 76-272 70-292 (308)
317 1zgk_A Kelch-like ECH-associat 97.6 0.0036 1.2E-07 50.1 16.1 188 76-272 24-245 (308)
318 1xi4_A Clathrin heavy chain; a 97.6 0.002 6.9E-08 61.2 15.7 199 70-274 71-296 (1630)
319 2woz_A Kelch repeat and BTB do 97.6 0.0048 1.7E-07 49.6 16.5 189 76-273 56-293 (318)
320 2uvk_A YJHT; unknown function, 97.6 0.0029 1E-07 51.8 14.8 193 76-274 65-349 (357)
321 3ei3_A DNA damage-binding prot 97.6 0.019 6.6E-07 54.5 21.8 174 88-267 808-999 (1158)
322 3sre_A PON1, serum paraoxonase 97.5 0.021 7.1E-07 46.7 19.0 153 109-267 51-252 (355)
323 4asc_A Kelch repeat and BTB do 97.5 0.0083 2.8E-07 48.1 16.1 184 79-271 7-225 (315)
324 2zwa_A Leucine carboxyl methyl 97.5 0.01 3.4E-07 53.4 17.9 195 76-271 397-639 (695)
325 1tl2_A L10, protein (tachylect 97.4 0.0079 2.7E-07 45.3 13.6 142 65-216 41-204 (236)
326 2ism_A Putative oxidoreductase 97.4 0.041 1.4E-06 44.9 20.7 185 64-255 74-333 (352)
327 2woz_A Kelch repeat and BTB do 97.2 0.027 9.1E-07 45.2 16.2 184 79-271 18-235 (318)
328 2be1_A Serine/threonine-protei 97.2 0.0072 2.5E-07 49.0 12.3 112 120-231 11-139 (339)
329 1cru_A Protein (soluble quinop 97.2 0.088 3E-06 44.7 19.9 102 109-210 28-162 (454)
330 3a9g_A Putative uncharacterize 97.2 0.074 2.5E-06 43.5 25.3 215 64-285 28-322 (354)
331 2g8s_A Glucose/sorbosone dehyd 97.1 0.081 2.8E-06 43.2 22.5 215 65-286 18-334 (353)
332 2g8s_A Glucose/sorbosone dehyd 97.1 0.028 9.5E-07 46.0 15.5 141 109-253 19-214 (353)
333 3s25_A Hypothetical 7-bladed b 97.0 0.083 2.8E-06 42.1 20.6 178 70-269 58-257 (302)
334 2uvk_A YJHT; unknown function, 97.0 0.027 9.2E-07 45.9 14.5 91 76-170 19-128 (357)
335 3s25_A Hypothetical 7-bladed b 96.9 0.11 3.9E-06 41.3 19.0 163 86-270 36-219 (302)
336 3ott_A Two-component system se 96.9 0.25 8.6E-06 44.7 27.5 193 64-270 62-263 (758)
337 2xzh_A Clathrin heavy chain 1; 96.9 0.13 4.4E-06 41.3 25.2 199 65-270 107-335 (365)
338 3qhy_B Beta-lactamase inhibito 96.7 0.11 3.7E-06 41.0 14.9 197 66-281 64-260 (282)
339 1bpo_A Protein (clathrin); cla 96.6 0.24 8.2E-06 41.4 25.8 188 78-270 117-334 (494)
340 1cru_A Protein (soluble quinop 96.6 0.29 1E-05 41.4 20.2 111 57-168 19-162 (454)
341 3das_A Putative oxidoreductase 96.5 0.25 8.7E-06 40.1 20.1 143 108-253 32-218 (347)
342 3a9g_A Putative uncharacterize 96.5 0.28 9.6E-06 40.0 24.3 189 64-255 72-330 (354)
343 2zwa_A Leucine carboxyl methyl 96.4 0.087 3E-06 47.3 14.6 149 76-225 451-638 (695)
344 3das_A Putative oxidoreductase 96.3 0.24 8.3E-06 40.2 15.3 109 145-255 27-158 (347)
345 1xi4_A Clathrin heavy chain; a 96.3 0.26 8.8E-06 47.5 17.1 199 66-271 107-335 (1630)
346 3qhy_B Beta-lactamase inhibito 96.1 0.37 1.3E-05 37.9 14.9 183 66-267 25-207 (282)
347 3sbq_A Nitrous-oxide reductase 95.9 0.25 8.7E-06 42.6 13.8 114 151-269 324-480 (638)
348 3ott_A Two-component system se 95.8 1 3.6E-05 40.7 27.9 195 64-271 21-224 (758)
349 3ei3_A DNA damage-binding prot 95.4 1.9 6.6E-05 41.1 30.2 210 66-285 515-747 (1158)
350 3b7f_A Glycosyl hydrolase, BNR 94.9 1.4 4.7E-05 36.3 20.7 185 64-254 54-296 (394)
351 3sbq_A Nitrous-oxide reductase 94.8 0.28 9.4E-06 42.4 10.5 101 110-211 325-454 (638)
352 3q6k_A 43.2 kDa salivary prote 93.0 3.3 0.00011 34.0 21.6 189 65-255 87-342 (381)
353 4gq2_M Nucleoporin NUP120; bet 92.8 6.2 0.00021 36.9 18.7 37 238-274 237-273 (950)
354 3q6k_A 43.2 kDa salivary prote 92.6 3.7 0.00013 33.7 16.5 158 109-267 88-306 (381)
355 2wg3_C Hedgehog-interacting pr 92.2 4.1 0.00014 34.5 13.5 106 150-256 14-158 (463)
356 2wg3_C Hedgehog-interacting pr 91.3 6.2 0.00021 33.4 15.8 103 109-211 15-158 (463)
357 1suu_A DNA gyrase subunit A; t 90.2 5.9 0.0002 31.5 22.4 186 76-266 7-230 (312)
358 2cn3_A Xyloglucanase, beta-1,4 89.1 12 0.00042 33.7 20.8 187 66-254 24-261 (737)
359 4gq2_M Nucleoporin NUP120; bet 88.8 15 0.00052 34.3 16.2 37 109-145 237-273 (950)
360 3b7f_A Glycosyl hydrolase, BNR 88.8 8.7 0.0003 31.4 21.1 182 77-263 22-258 (394)
361 4fhn_B Nucleoporin NUP120; pro 88.0 1.4 4.8E-05 42.0 7.8 37 238-274 239-275 (1139)
362 3uc1_A DNA gyrase subunit A; D 85.3 13 0.00044 29.8 20.7 185 77-266 3-227 (327)
363 3no0_A DNA gyrase subunit A; D 85.1 12 0.0004 29.2 21.9 193 65-266 24-245 (276)
364 3zwu_A Alkaline phosphatase PH 83.5 6.2 0.00021 34.5 9.0 60 193-254 477-548 (592)
365 3f7f_A Nucleoporin NUP120; nuc 83.3 6.5 0.00022 35.2 9.0 34 239-274 224-257 (729)
366 1zi0_A DNA gyrase subunit A; b 83.0 16 0.00054 28.9 21.2 185 76-265 2-224 (307)
367 1sqj_A OXG-RCBH, oligoxylogluc 82.9 28 0.00095 31.7 23.8 164 64-229 14-207 (789)
368 3uc1_A DNA gyrase subunit A; D 80.5 20 0.0007 28.6 21.9 155 65-221 95-278 (327)
369 4a9v_A PHOX; hydrolase, beta-p 80.0 15 0.00051 32.0 9.8 61 193-255 477-549 (592)
370 4a9v_A PHOX; hydrolase, beta-p 77.1 20 0.00069 31.2 9.8 61 150-210 476-549 (592)
371 1wp5_A Topoisomerase IV; broke 76.4 27 0.00094 27.8 21.9 186 76-266 4-224 (323)
372 3zwu_A Alkaline phosphatase PH 75.2 16 0.00055 32.0 8.9 59 151-209 477-548 (592)
373 3l6v_A GYRA, DNA gyrase subuni 71.3 40 0.0014 27.5 22.9 142 76-220 6-178 (370)
374 3no0_A DNA gyrase subunit A; D 70.0 36 0.0012 26.4 19.3 154 64-221 67-245 (276)
375 3f7f_A Nucleoporin NUP120; nuc 68.3 11 0.00037 33.8 6.3 36 194-231 224-259 (729)
376 4fhn_B Nucleoporin NUP120; pro 67.7 88 0.003 29.9 17.9 37 194-230 240-276 (1139)
377 3a0f_A Xyloglucanase; beta-pro 66.5 76 0.0026 28.7 23.1 150 63-213 19-203 (763)
378 4gz8_A Semaphorin-3A; multi-do 62.8 71 0.0024 28.5 10.4 69 193-262 413-495 (667)
379 1q47_A Semaphorin 3A; beta pro 59.9 65 0.0022 27.5 9.4 69 193-262 405-487 (495)
380 1zvt_A Topoisomerase IV subuni 59.0 58 0.002 24.9 14.0 141 78-221 3-162 (256)
381 1suu_A DNA gyrase subunit A; t 58.0 68 0.0023 25.3 24.8 142 78-221 59-230 (312)
382 4hvt_A Ritya.17583.B, post-pro 55.7 1.2E+02 0.004 27.3 20.1 199 66-269 130-383 (711)
383 1q47_A Semaphorin 3A; beta pro 55.6 84 0.0029 26.8 9.4 68 66-133 405-487 (495)
384 1zvt_A Topoisomerase IV subuni 55.5 67 0.0023 24.5 12.6 141 121-266 4-162 (256)
385 3kci_A Probable E3 ubiquitin-p 55.1 84 0.0029 25.5 27.0 194 66-266 54-292 (389)
386 1sqj_A OXG-RCBH, oligoxylogluc 54.6 1.3E+02 0.0043 27.4 17.4 153 107-261 14-195 (789)
387 3al9_A Plexin-A2; beta-propell 47.3 75 0.0026 27.4 7.9 69 193-262 401-476 (539)
388 4gz8_A Semaphorin-3A; multi-do 46.6 1E+02 0.0036 27.4 8.8 78 56-133 403-495 (667)
389 3al9_A Plexin-A2; beta-propell 46.1 74 0.0025 27.5 7.7 70 64-133 399-476 (539)
390 1wp5_A Topoisomerase IV; broke 45.1 1.1E+02 0.0039 24.2 25.5 188 78-267 51-277 (323)
391 3oky_B Putative uncharacterize 44.1 1.6E+02 0.0055 25.6 9.8 80 55-134 393-496 (565)
392 2zux_A YESW protein; beta-prop 40.8 1.8E+02 0.0063 25.3 20.1 178 88-274 152-407 (591)
393 1olz_A Semaphorin 4D; developm 38.2 1.4E+02 0.0046 26.7 8.2 68 194-262 399-477 (663)
394 2cn3_A Xyloglucanase, beta-1,4 37.2 2.3E+02 0.0079 25.4 16.3 103 109-212 24-153 (737)
395 3nvq_A Semaphorin-7A; beta-pro 35.6 1.4E+02 0.0048 26.2 7.7 69 66-134 363-445 (590)
396 3hx6_A Type 4 fimbrial biogene 35.1 2.3E+02 0.0077 24.7 17.3 149 120-269 86-286 (570)
397 3nvq_A Semaphorin-7A; beta-pro 32.8 1.9E+02 0.0067 25.3 8.1 57 205-262 382-444 (590)
398 1zi0_A DNA gyrase subunit A; b 31.9 1.8E+02 0.0063 22.7 23.2 187 78-267 54-277 (307)
399 3oky_B Putative uncharacterize 28.1 2.6E+02 0.0088 24.3 8.1 70 193-262 404-495 (565)
400 3kci_A Probable E3 ubiquitin-p 27.8 2.4E+02 0.0082 22.8 28.0 192 66-266 106-344 (389)
401 3ol2_B Plexin-B1; beta-propell 25.0 3.3E+02 0.011 23.4 8.7 68 193-262 388-461 (528)
402 1xks_A Nuclear pore complex pr 24.5 3.1E+02 0.011 23.0 20.2 151 66-223 40-238 (450)
403 1olz_A Semaphorin 4D; developm 23.9 3.2E+02 0.011 24.3 8.2 66 152-217 399-477 (663)
404 3l6v_A GYRA, DNA gyrase subuni 22.9 3E+02 0.01 22.3 24.5 113 64-179 45-179 (370)
405 3ol2_B Plexin-B1; beta-propell 22.7 2.3E+02 0.0079 24.4 6.8 70 65-134 387-462 (528)
406 4d9s_A UVB-resistance protein 22.6 3.1E+02 0.011 22.2 25.1 190 65-266 68-304 (406)
407 1b2p_A Protein (lectin); manno 21.5 1.8E+02 0.006 19.0 11.5 24 239-267 94-117 (119)
408 3a0f_A Xyloglucanase; beta-pro 20.9 4.6E+02 0.016 23.6 18.8 151 106-258 19-203 (763)
409 1sr4_A CDT A, cytolethal diste 20.7 2.6E+02 0.0088 20.6 7.9 94 171-274 69-166 (206)
410 4h3o_A Lectin; cadmium, plant 20.4 1.7E+02 0.0059 18.5 9.9 45 154-208 54-98 (105)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-42 Score=281.82 Aligned_cols=230 Identities=21% Similarity=0.307 Sum_probs=209.7
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
+.+..+++.+|.+.|++++|+| ++.+|++|+.||.|++||+.++..+..+..|..+|.+++|+|++++|++|+.|+.|+
T Consensus 2 ~l~~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 2 KLDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred cceeEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 3466789999999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-cEEEEeeccCCCeEEEEEcC-CCCEEEEEe
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTP-DGKTICTGS 210 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~p-~~~~l~~~~ 210 (288)
+||+.+++.+..+.+|...|.+++|+|++++|++|+.||+|++||++++ .....+.+|...|.+++|+| ++.+|++|+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999887 45577889999999999999 678999999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEee
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDL 284 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~ 284 (288)
.|+.|++||++++.....+... +...+..+.|+| ++.+|++|+.||.|++||+++++++..+ ..+.+++|+|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECC--CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCccceeccC--CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 9999999999888776666543 567889999987 6789999999999999999999999887 4567777877
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 239 ~ 239 (304)
T 2ynn_A 239 T 239 (304)
T ss_dssp S
T ss_pred C
Confidence 6
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-42 Score=289.11 Aligned_cols=227 Identities=27% Similarity=0.446 Sum_probs=212.9
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
.....+.+|.++|++++|+| ++.+|++|+.||+|++||+.+++....+.+|...|++++|+|++++|++|+.||+|++|
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp SCSCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEE
T ss_pred CceEeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 34678899999999999999 78899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCe
Q 023018 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~ 214 (288)
|+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|...|.++.|+|++.+|++|+.|+.
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCceeEEEcCCCccccCeEEEEEcCC--------------------CCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD--------------------STLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|++||++++.....+.. |...|.+++|+|+ +.+|++|+.||.|++||+++++++..+
T Consensus 258 v~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 258 VRVWVVATKECKAELRE---HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp EEEEETTTCCEEEEECC---CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCceeeEecC---CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 99999999988888876 7789999999996 678999999999999999999999887
Q ss_pred c----ceEEEEEeec
Q 023018 275 F----QYTCVAYDLD 285 (288)
Q Consensus 275 ~----~~~~~~~~~d 285 (288)
. .+.+++|+|+
T Consensus 335 ~~h~~~v~~v~~~~~ 349 (410)
T 1vyh_C 335 VGHDNWVRGVLFHSG 349 (410)
T ss_dssp ECCSSCEEEEEECSS
T ss_pred ECCCCcEEEEEEcCC
Confidence 3 4677788765
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-42 Score=280.34 Aligned_cols=226 Identities=24% Similarity=0.345 Sum_probs=212.2
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEe
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (288)
....+.+|...|.+++|+| ++.++++++.|++|++||+.+++.+..+..|...+.+++|+|++++|++|+.+|.|++|+
T Consensus 72 ~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 150 (321)
T ss_dssp EEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEE
T ss_pred eeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 3456889999999999999 778999999999999999999999999998999999999999999999999999999999
Q ss_pred CCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeE
Q 023018 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (288)
Q Consensus 136 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i 215 (288)
+.+++....+..+...+.+++|+|++++|++|+.||.|++||+++++.+..+.+|..+|++++|+|++++|++|+.|+.|
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i 230 (321)
T 3ow8_A 151 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYI 230 (321)
T ss_dssp TTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCE
T ss_pred cCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeE
Confidence 99999998998898999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
++||++++.....+.+ |...|.+++|+|++.+|++++.||.|++||+.+++++..+ ..+.+++|+|+
T Consensus 231 ~iwd~~~~~~~~~~~~---h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 231 KIYDVQHANLAGTLSG---HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN 301 (321)
T ss_dssp EEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEECCCcceeEEEcC---CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 9999999988888877 7889999999999999999999999999999999999988 45667777765
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.9e-41 Score=276.13 Aligned_cols=227 Identities=23% Similarity=0.371 Sum_probs=207.3
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC-----CeeeEeeccccCcEEEEEEecCCCEEEEEeCCC
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-----GDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (288)
.....+.+|.++|++++|+|.++.+|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++++|++|+.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 455688999999999999996678999999999999999864 345677889999999999999999999999999
Q ss_pred eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCC------C
Q 023018 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD------G 203 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~------~ 203 (288)
+|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||++ +..+..+.+|...+.++.|+|. +
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------C
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999996 5677888899999999999995 4
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEE
Q 023018 204 KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCV 280 (288)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~ 280 (288)
..|++++.|+.|++||+++++....+.+ |...|.+++|+|++.+|++++.||.|++||+.+++++..+ ..+.++
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~ 243 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIG---HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSL 243 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECC---CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEE
Confidence 4899999999999999999888887776 7889999999999999999999999999999999988877 567888
Q ss_pred EEeec
Q 023018 281 AYDLD 285 (288)
Q Consensus 281 ~~~~d 285 (288)
+|+|+
T Consensus 244 ~~sp~ 248 (319)
T 3frx_A 244 AFSPN 248 (319)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 88876
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-41 Score=287.34 Aligned_cols=229 Identities=20% Similarity=0.363 Sum_probs=214.6
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
..+....+.+|.+.|++++|+| ++.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|+
T Consensus 139 ~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 139 TGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp TCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3456788899999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCC----------
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD---------- 202 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~---------- 202 (288)
+||+.++..+..+.+|...+.++.|+|++.+|++|+.||.|++||+++++....+..|...|.+++|+|+
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 297 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCC
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ----------CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 203 ----------GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 203 ----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
+.+|++|+.|+.|++||++++..+..+.+ |...|.+++|+|++.+|++|+.||.|++||+.+++++.
T Consensus 298 ~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~---h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374 (410)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE
T ss_pred cccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 67899999999999999999999888887 77899999999999999999999999999999999888
Q ss_pred Ee----cceEEEEEeec
Q 023018 273 LN----FQYTCVAYDLD 285 (288)
Q Consensus 273 ~~----~~~~~~~~~~d 285 (288)
.+ ..+.+++|+|+
T Consensus 375 ~~~~h~~~v~~l~~~~~ 391 (410)
T 1vyh_C 375 TLNAHEHFVTSLDFHKT 391 (410)
T ss_dssp EEECCSSCEEEEEECSS
T ss_pred EEcCCCCcEEEEEEcCC
Confidence 87 34677777776
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-40 Score=275.33 Aligned_cols=229 Identities=19% Similarity=0.378 Sum_probs=210.7
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeE
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (288)
.+.+....+.+|.++|++++|+| ++.+|++|+.||.|++||+.+++.+..+..|...|.+++|+|++++|++|+.|+.|
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred ccchhheeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 34567789999999999999999 78899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCC----ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEE
Q 023018 132 QIWDPSSG----NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC 207 (288)
Q Consensus 132 ~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 207 (288)
++|++.+. +....+.+|.+.+.++.|++++ .+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|+
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 99999875 3456678899999999999876 488999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe------cceEEEE
Q 023018 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN------FQYTCVA 281 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~------~~~~~~~ 281 (288)
+|+.|+.|++||++++.....+.. |...|.+++|+|++.+|++|+.||.|++||+++++.+..+ ..+.+++
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 277 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTG---HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEeCCCcEEEEECCCCeeEEEEcC---CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE
Confidence 999999999999999998888877 7789999999999999999999999999999999888766 2578888
Q ss_pred Eeec
Q 023018 282 YDLD 285 (288)
Q Consensus 282 ~~~d 285 (288)
|+|+
T Consensus 278 ~s~~ 281 (340)
T 1got_B 278 FSKS 281 (340)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8876
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=274.34 Aligned_cols=232 Identities=22% Similarity=0.344 Sum_probs=208.0
Q ss_pred CCCCCCeeEeecCCCCEEEEEEcCC---CCcEEEEEeCCCeEEEEEccCCee--eEeeccccCcEEEEEEecCCCEEEEE
Q 023018 51 EQPDDSTHIFSGHSDEVYSVACSPT---DATLVATGGGDDKGFFWRINQGDW--ASEIQGHKDSVSSLAFSMDGQLLASG 125 (288)
Q Consensus 51 ~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~ 125 (288)
+......+.+.+|.++|++++|+|. ++.+|++|+.|++|+||++...+. ...+.+|...|.+++|++++.+++++
T Consensus 19 ~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~ 98 (321)
T 3ow8_A 19 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASS 98 (321)
T ss_dssp --CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred hhhhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEE
Confidence 3334555677899999999999983 356899999999999999987654 44678999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCE
Q 023018 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 205 (288)
+.|++|++||+.+++.+..+..+...+.+++|+|++++|++++.+|.|++|++++++....+..+...+.+++|+|++++
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 99999999999999999999888888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec----ceEEEE
Q 023018 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNF----QYTCVA 281 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~----~~~~~~ 281 (288)
|++|+.||.|++||+++++.+..+.. |..+|.+++|+|++.+|++|+.||.|++||+++++++..+. .+.+++
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEG---HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 255 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC---CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcc---cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE
Confidence 99999999999999999998888876 77899999999999999999999999999999999988874 466778
Q ss_pred Eeec
Q 023018 282 YDLD 285 (288)
Q Consensus 282 ~~~d 285 (288)
|+|+
T Consensus 256 ~sp~ 259 (321)
T 3ow8_A 256 FCPD 259 (321)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8775
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-40 Score=270.71 Aligned_cols=228 Identities=22% Similarity=0.320 Sum_probs=205.7
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
...+..+.+|..+|.+++|+| ++.+|++|+.|+.|++||+.+++.+..+.+|...|++++|+|++++|++|+.||+|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~l 123 (304)
T 2ynn_A 45 QVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (304)
T ss_dssp TEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred CceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEE
Confidence 456788899999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCC-ceeEEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEee-ccCCCeEEEEEcC--CCCEEEE
Q 023018 134 WDPSSG-NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTP--DGKTICT 208 (288)
Q Consensus 134 ~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~p--~~~~l~~ 208 (288)
||+.++ .....+.+|...|.+++|+| ++..|++|+.|++|++||++++.+...+. .+...+..+.|+| ++.+|++
T Consensus 124 Wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 203 (304)
T 2ynn_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT 203 (304)
T ss_dssp EEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE
T ss_pred EECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE
Confidence 999887 45567888999999999999 67899999999999999998877655554 4567899999987 6789999
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec----ceEEEEEee
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNF----QYTCVAYDL 284 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~----~~~~~~~~~ 284 (288)
|+.|+.|++||+++++.+..+.+ |...|.+++|+|++.+|++|+.||.|++||+.+++++..+. .+.+++|.|
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECT
T ss_pred EcCCCeEEEEeCCCCccceeeCC---CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECC
Confidence 99999999999999999988887 78899999999999999999999999999999999999883 456677665
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 281 ~ 281 (304)
T 2ynn_A 281 T 281 (304)
T ss_dssp T
T ss_pred C
Confidence 4
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.8e-40 Score=271.84 Aligned_cols=232 Identities=19% Similarity=0.373 Sum_probs=205.9
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeE------------------------------
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS------------------------------ 101 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~------------------------------ 101 (288)
...+....+.+|.++|++++|+| ++.+|++|+.||+|++||..+++...
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred cccEEEEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 34567889999999999999999 77899999999999999986654322
Q ss_pred ------------------eeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcC--CC
Q 023018 102 ------------------EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP--RG 161 (288)
Q Consensus 102 ------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~~ 161 (288)
.+..|...|.+++|+|++.+|++++.||+|++||+.+++.+..+.+|...|.+++|+| ++
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 2335777899999999999999999999999999999999999999999999999988 46
Q ss_pred CEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEE
Q 023018 162 HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTC 241 (288)
Q Consensus 162 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 241 (288)
++|++|+.||.|++||+++++++..+..|...|++++|+|++.+|++|+.|+.|++||++++..+..+.... +...+.+
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~-~~~~~~~ 289 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES-IIFGASS 289 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-CCSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC-cccceeE
Confidence 899999999999999999999999999999999999999999999999999999999999887776665322 4457899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 242 LTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 242 ~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
++|+|++.+|++|+.|+.|++||+.+++.+..+ ..+.+++|+|+
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 999999999999999999999999999998887 45677888776
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.8e-40 Score=268.16 Aligned_cols=221 Identities=26% Similarity=0.453 Sum_probs=207.0
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
.......+.+|..+|++++|+| ++.+|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++|+.||.|+
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CceeEEEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 3456778899999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCC
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d 212 (288)
+||+.+++.+..+..|...|.+++|+|++++|++|+.||.|++||+++++.+..+..|..+|.+++|+|++++|++++.|
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ 276 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~ 276 (288)
|.|++||+++++.+..+... +...+..++|+|++++|++++.||.|++||+.+++++..+..
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 232 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 232 (312)
T ss_dssp SCEEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS
T ss_pred CcEEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe
Confidence 99999999999887776543 567899999999999999999999999999999998887743
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=274.66 Aligned_cols=222 Identities=16% Similarity=0.205 Sum_probs=192.9
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEe----eccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE----IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
....|...|.+++|+| ++ .|++|+.||+|+|||+.+++.+.. +.+|...|++++|+|++++|++|+.||+|++|
T Consensus 77 ~~~~~~~~v~~~~~s~-d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 77 AGVQTEAGVADLTWVG-ER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EEEEESSCEEEEEEET-TT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCEEEEEEeC-CC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3345677899999999 54 677999999999999998765443 44799999999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEEEee--ccCCCeEEEEEcC-CCCEEEEEe
Q 023018 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTCGDFTP-DGKTICTGS 210 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~p-~~~~l~~~~ 210 (288)
|+.+++.+..+.+|...|.+++|+|++. +|++++.|++|++||++++++...+. .+...+.+++|+| ++++|++|+
T Consensus 155 d~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred ECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 9999999999999999999999999874 78999999999999999998887764 3556789999999 567889999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
.||.|++||+++++.+..+.+ |...|++++|+|++ .+|++|+.||+|++||+.+++++... ..+.+++|+|+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~ 310 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAV---HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPL 310 (344)
T ss_dssp TTSEEEEEESCC--CCEEEEC---CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSS
T ss_pred cCCcEEEEECCCCcEEEEEcC---CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCC
Confidence 999999999999999998887 78899999999987 57899999999999999999887654 45788888875
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3e-39 Score=267.22 Aligned_cols=230 Identities=23% Similarity=0.385 Sum_probs=208.2
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----eeeEeeccccCcEEEEEEecCCCEEEEEeCC
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLLASGGLD 128 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 128 (288)
....+..+..|...|.+++|+| ++.+|++|+.|+.|++|++.+. .....+.+|...|.++.|++++ .+++++.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d 163 (340)
T 1got_B 86 TTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGD 163 (340)
T ss_dssp TCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETT
T ss_pred CCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECC
Confidence 3556778889999999999999 7889999999999999999865 4566778899999999999877 48899999
Q ss_pred CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEE
Q 023018 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~ 208 (288)
+.|++||+.+++.+..+.+|.+.|.+++|+|++++|++|+.||.|++||++++.++..+.+|...|++++|+|++++|++
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEee
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDL 284 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~ 284 (288)
|+.||.|++||+++++.+..+.. ..+...|.+++|+|++.+|++|+.||.|++||+.+++.+..+ ..+.+++|+|
T Consensus 244 ~s~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~ 322 (340)
T 1got_B 244 GSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECC-TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EcCCCcEEEEECCCCcEEEEEcc-CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcC
Confidence 99999999999999887776653 224457999999999999999999999999999999998887 4567788877
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 323 d 323 (340)
T 1got_B 323 D 323 (340)
T ss_dssp T
T ss_pred C
Confidence 6
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=269.71 Aligned_cols=208 Identities=21% Similarity=0.243 Sum_probs=182.5
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCC-EEEEEeCCCeEEEEeC
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDP 136 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~ 136 (288)
..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.+++.+..+.+|...|++++|+|++. +|++|+.||+|++||+
T Consensus 121 ~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~ 199 (344)
T 4gqb_B 121 FCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDT 199 (344)
T ss_dssp EEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccc
Confidence 34568999999999999 888999999999999999999999999999999999999999885 7899999999999999
Q ss_pred CCCceeEEec--cCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCC-CEEEEEeCC
Q 023018 137 SSGNLKCTLE--GPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG-KTICTGSDD 212 (288)
Q Consensus 137 ~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~~~~~d 212 (288)
++++....+. .+...+.+++|+| ++++|++|+.||.|++||+++++++..+.+|...|++++|+|++ ++|++|+.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 200 RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT
T ss_pred cccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC
Confidence 9998887764 3455799999999 56689999999999999999999999999999999999999987 579999999
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcE
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~t~~~ 270 (288)
+.|+|||+.+++... +.+ |...|++++|+|++. +|++++.||+|++|++.+...
T Consensus 280 ~~i~vwd~~~~~~~~-~~~---H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 280 CSLAVLDSSLSELFR-SQA---HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SCEEEECTTCCEEEE-ECC---CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CeEEEEECCCCcEEE-EcC---CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999999999887554 444 888999999999875 677899999999999987643
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.3e-39 Score=266.03 Aligned_cols=228 Identities=21% Similarity=0.318 Sum_probs=197.0
Q ss_pred CCCCeeEeecCCCCEEEEEE-----cCCCCcEEEEEeCCCeEEEEEccCC-------eeeEeeccccCcEEEEEEecCCC
Q 023018 53 PDDSTHIFSGHSDEVYSVAC-----SPTDATLVATGGGDDKGFFWRINQG-------DWASEIQGHKDSVSSLAFSMDGQ 120 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~-----~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~ 120 (288)
.......+.+|.+.|++++| ++.++.+|++|+.|++|++|++.+. .....+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 34567789999999999999 6657889999999999999999753 45667889999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee---ccCCCeEEE
Q 023018 121 LLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS---GHGSSVTCG 197 (288)
Q Consensus 121 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~ 197 (288)
+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+... ...... .|...|.++
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeee
Confidence 9999999999999999999999999999999999999999999999999999999999743 333333 688899999
Q ss_pred EEcCCC----------CEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-
Q 023018 198 DFTPDG----------KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT- 266 (288)
Q Consensus 198 ~~~p~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~- 266 (288)
+|+|++ .+|++++.||.|++||. ..+....+.. |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~---h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA---HESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC---ccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999986 78999999999999994 4566666665 77899999999999999999999999999994
Q ss_pred CCcEEEEe---cceEEEEEeec
Q 023018 267 TGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 267 t~~~~~~~---~~~~~~~~~~d 285 (288)
.+.+...+ ..+.+++|+|+
T Consensus 245 ~~~~~~~~~~~~~v~~v~~sp~ 266 (343)
T 2xzm_R 245 LTYPQREFDAGSTINQIAFNPK 266 (343)
T ss_dssp CSSCSEEEECSSCEEEEEECSS
T ss_pred CcccceeecCCCcEEEEEECCC
Confidence 34333333 45788888886
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=264.14 Aligned_cols=208 Identities=25% Similarity=0.461 Sum_probs=185.2
Q ss_pred CCeeEeecCCC-CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeE---eeccccCcEEEEEEecCCCEEEEEeCCCe
Q 023018 55 DSTHIFSGHSD-EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS---EIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (288)
Q Consensus 55 ~~~~~~~~h~~-~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (288)
..+..+.+|.. .|++++|+| ++.+||+|+.|++|+||++.++.... ...+|...|.+++|+|++++|++|+.|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 46778899988 999999999 78899999999999999999876432 23579999999999999999999999999
Q ss_pred EEEEeCCCCc--eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc---cEEEEeeccCCCeEEEEEcCCCCE
Q 023018 131 VQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA---AYLNMFSGHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 131 i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~p~~~~ 205 (288)
|++|++..+. .+..+.+|...|.+++|+|++++|++|+.|+.|++||++.+ ..+..+..|...|.+++|+|++.+
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9999988764 56778899999999999999999999999999999999875 346677889999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 206 ICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
|++++.|+.|++||++++.. ...+.+ |...|.+++|+|++++|++++.||.|++|++.
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~---h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEG---HESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecC---CCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 99999999999999987753 345555 78899999999999999999999999999974
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5e-38 Score=257.67 Aligned_cols=224 Identities=20% Similarity=0.337 Sum_probs=202.9
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
.++..+.+|...|++++|+| ++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++|
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vw 134 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 134 (319)
T ss_dssp EEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred ccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 45778999999999999999 88899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCEEEEEEcCC------CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEE
Q 023018 135 DPSSGNLKCTLEGPGGGVEWVSWHPR------GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~ 208 (288)
|+. ++.+..+.+|...+.++.|+|. +..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++
T Consensus 135 d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 135 TIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp ETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEE
T ss_pred ECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEE
Confidence 986 4567778889999999999985 448999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec------------c
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNF------------Q 276 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~------------~ 276 (288)
++.||.|++||+.+++.+..+.. ...|.+++|+|++.+|++++.+ .+++|++.++..+..+. .
T Consensus 214 ~~~dg~i~iwd~~~~~~~~~~~~----~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKAMYTLSA----QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPH 288 (319)
T ss_dssp EETTCEEEEEETTTTEEEEEEEC----CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCC
T ss_pred EeCCCeEEEEECCCCcEEEEecC----CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcc
Confidence 99999999999999998888873 4679999999999999888754 59999999888776652 3
Q ss_pred eEEEEEeec
Q 023018 277 YTCVAYDLD 285 (288)
Q Consensus 277 ~~~~~~~~d 285 (288)
+.+++|+||
T Consensus 289 v~~~~~spd 297 (319)
T 3frx_A 289 AVSLAWSAD 297 (319)
T ss_dssp EEEEEECTT
T ss_pred eeEEEECCC
Confidence 567888886
No 17
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-38 Score=256.72 Aligned_cols=225 Identities=19% Similarity=0.283 Sum_probs=191.5
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC--CeeeEeeccccCcEEEEEEec--CCCEEEEEeCCCeEE
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ--GDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQ 132 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~ 132 (288)
+..+.+|.+.|++++|+| ++.+||+|+.|++|+||++.. .+.+..+.+|..+|++++|++ ++++|++|+.||+|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp CEECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred ceeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 356789999999999999 788999999999999999974 367788999999999999986 388999999999999
Q ss_pred EEeCCCCc--eeEEeccCCCCEEEEEEcCC--CCEEEEecCCCeEEEEECCccc--EEEEeeccCCCeEEEEEcCC----
Q 023018 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPD---- 202 (288)
Q Consensus 133 i~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~p~---- 202 (288)
+||+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||++++. ....+.+|...|.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 55667789999999999997 8899999999999999998763 24567789999999999996
Q ss_pred ---------CCEEEEEeCCCeEEEEeCCCCc----eeEEEcCCCccccCeEEEEEcCCC---CEEEEEeCCCcEEEEEcC
Q 023018 203 ---------GKTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISADS---TLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 203 ---------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~ 266 (288)
+++|++|+.|+.|++||++++. ....+.+ |...|.+++|+|++ .+|++++.|+.|++||+.
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~---H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC---CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5799999999999999998765 4445555 78899999999984 899999999999999998
Q ss_pred CCc---EEEEe------cceEEEEEeec
Q 023018 267 TGK---VCCLN------FQYTCVAYDLD 285 (288)
Q Consensus 267 t~~---~~~~~------~~~~~~~~~~d 285 (288)
+++ ....+ ..+.+++|+|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 265 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLS 265 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSS
T ss_pred CCCCccceeeeecccCCCcEEEEEECCC
Confidence 753 12222 34667777775
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-39 Score=273.68 Aligned_cols=229 Identities=24% Similarity=0.433 Sum_probs=204.6
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
.....+.+.+|.++|++++|+| ++.+|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|++|+.|+.|+
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~ 133 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACS 133 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCE
T ss_pred eeEEeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEE
Confidence 4556788999999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCc-------eeEEeccCCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEe-----eccCCCeEEEEE
Q 023018 133 IWDPSSGN-------LKCTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMF-----SGHGSSVTCGDF 199 (288)
Q Consensus 133 i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~ 199 (288)
+|++.+.. ....+.+|.+.+.++.|+|+ +..|++|+.|++|++||+++++.+..+ .+|...|.+++|
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 99987532 34557789999999999996 457999999999999999999988777 578899999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEeCC-CCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc-
Q 023018 200 TP-DGKTICTGSDDATLRVWNPK-SGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ- 276 (288)
Q Consensus 200 ~p-~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~- 276 (288)
+| ++.+|++|+.|+.|++||++ .+..+..+.+ |...|.+++|+|++.+|++|+.||.|++||+++++++..+..
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG---HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC---CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEECC---cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 87 88999999999999999998 4566777776 788999999999999999999999999999999999887632
Q ss_pred ----------eEEEEEeec
Q 023018 277 ----------YTCVAYDLD 285 (288)
Q Consensus 277 ----------~~~~~~~~d 285 (288)
+.+++|+|+
T Consensus 291 ~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp CSSSCCSSCSCSEEEECSS
T ss_pred ccccccccCceEEEEECCC
Confidence 567888875
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-38 Score=261.08 Aligned_cols=209 Identities=23% Similarity=0.398 Sum_probs=179.6
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC--eeeEee-cc-ccCcEEEEEEecCCCEEEEEeCCC
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEI-QG-HKDSVSSLAFSMDGQLLASGGLDG 129 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~dg 129 (288)
.+.++.+.+|.++|++++|+| + +||+|+.|+.|++|++..+ .....+ .. |...|.+++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cccceeeccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 346788999999999999998 4 9999999999999999874 445555 34 999999999999999999999999
Q ss_pred eEEEEeCCC-------CceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc----ccEEEEeeccCCCeEEEE
Q 023018 130 LVQIWDPSS-------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR----AAYLNMFSGHGSSVTCGD 198 (288)
Q Consensus 130 ~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~ 198 (288)
+|++|++.. .+.+..+.+|...|.+++|+|++++|++|+.|++|++||++. .+++..+.+|...|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999999853 345677889999999999999999999999999999999953 256778889999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCC--ceeEEEcCCCccccCeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCC
Q 023018 199 FTPDGKTICTGSDDATLRVWNPKSG--ENIHVIRGHPYHTEGLTCLTISAD--STLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 199 ~~p~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~t~ 268 (288)
|+|++.+|++++.|+.|++||..++ +.+..+.+ |...|.+++|+|+ +.+|++++.|+.|++|++.++
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG---HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC---CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 9999999999999999999998766 45666665 7889999999998 678999999999999999765
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-37 Score=254.80 Aligned_cols=232 Identities=23% Similarity=0.378 Sum_probs=205.0
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
..+....+.+|...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|+
T Consensus 54 ~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 132 (312)
T 4ery_A 54 DGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 132 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 3456778899999999999999 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee-ccCCCeEEEEEcCCCCEEEEEeC
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
+||+.+++.+..+..|..+|.+++|+|++++|++++.||.|++||+++++.+..+. .+..++..++|+|++++|++++.
T Consensus 133 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 99999999999999999999999999999999999999999999999998877664 45678999999999999999999
Q ss_pred CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc----eEEEEEeec
Q 023018 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ----YTCVAYDLD 285 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~----~~~~~~~~d 285 (288)
||.|++||+++++.+..+..+......+......+++.+|++|+.||.|++||+.+++++..+.+ +.+++|+|+
T Consensus 213 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 290 (312)
T 4ery_A 213 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT 290 (312)
T ss_dssp TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc
Confidence 99999999999998888877543223333333446789999999999999999999999988854 456666654
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-37 Score=258.95 Aligned_cols=206 Identities=23% Similarity=0.423 Sum_probs=190.6
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEec--CCCEEEEEeCCCeEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQ 132 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~ 132 (288)
.....+.+|...|.+++|+| ++..|++++.||+|++||+.+++.+..+.+|...|.+++|+| ++.+|++|+.||.|+
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp GGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred ccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 45567889999999999999 778899999999999999999999999999999999999987 467999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeecc--CCCeEEEEEcCCCCEEEEEe
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--GSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~~~ 210 (288)
+||+++++.+..+..|...|.+++|+|++.+|++|+.|++|++||++.++.+..+..+ ...+.+++|+|++.+|++|+
T Consensus 224 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999998877766543 34789999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
.|+.|++||+.++..+..+.+ |...|++++|+|++.+|++|+.||.|++|+
T Consensus 304 ~d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 NDYTINVWDVLKGSRVSILFG---HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSCEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEECCCCceEEEEEC---CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999998888876 788999999999999999999999999995
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-37 Score=261.31 Aligned_cols=215 Identities=30% Similarity=0.442 Sum_probs=190.0
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (288)
..|++++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.+++....
T Consensus 124 ~~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 124 LYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp CBEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eeEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE
Confidence 3599999999 888999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred eccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEe-------eccCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 023018 145 LEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF-------SGHGSSVTCGDFTPDGKTICTGSDDATLR 216 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~p~~~~l~~~~~dg~i~ 216 (288)
+. +...+.+++|+| ++++|++|+.||.|++||++++..+..+ .+|...|++++|+|++++|++|+.|+.|+
T Consensus 203 ~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 203 LS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp EE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 76 456799999999 8999999999999999999998877766 56889999999999999999999999999
Q ss_pred EEeCCCCc------------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc----eEEE
Q 023018 217 VWNPKSGE------------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ----YTCV 280 (288)
Q Consensus 217 i~d~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~----~~~~ 280 (288)
+||+++.. ....+.+ |...|.+++|+|++.+|++|+.||.|++||+.+++++..+.+ +.++
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIG---HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp EEEC---------------CEEEEEEC---CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEECCCCCCcccccCCCCCcceEEEec---ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 99997643 2334444 778899999999999999999999999999999999988744 5566
Q ss_pred EEee
Q 023018 281 AYDL 284 (288)
Q Consensus 281 ~~~~ 284 (288)
+|++
T Consensus 359 ~~~~ 362 (393)
T 1erj_A 359 AVAN 362 (393)
T ss_dssp EECS
T ss_pred EecC
Confidence 6654
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.2e-38 Score=281.31 Aligned_cols=227 Identities=25% Similarity=0.433 Sum_probs=203.7
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC-----eeeEeeccccCcEEEEEEecCCCEEEEEeCCCe
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-----DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (288)
....+++|.+.|++++|+|.++.+|++|+.||+|++|++.+. .....+.+|...|.+++|+|++++|++|+.||+
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 345789999999999999977789999999999999998753 345678899999999999999999999999999
Q ss_pred EEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEe---eccCCCeEEEEEcCCC--CE
Q 023018 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGDFTPDG--KT 205 (288)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~p~~--~~ 205 (288)
|+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.+++|+|++ ..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999999999999999999999999999999999999999999999998655433322 3688899999999976 68
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEE
Q 023018 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAY 282 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~ 282 (288)
|++++.|+.|++||+++++....+.+ |...|++++|+|++++|++|+.||.|++||+.+++++..+ ..+.+++|
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~---h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 610 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAG---HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 610 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEE
Confidence 99999999999999999988888877 7889999999999999999999999999999999988876 45778888
Q ss_pred eec
Q 023018 283 DLD 285 (288)
Q Consensus 283 ~~d 285 (288)
+|+
T Consensus 611 sp~ 613 (694)
T 3dm0_A 611 SPN 613 (694)
T ss_dssp CSS
T ss_pred cCC
Confidence 876
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.3e-38 Score=261.89 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=185.7
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCC-EEEEEeCCCeEEEEeC
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDP 136 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~ 136 (288)
....+|...|++++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|++++|+|++. ++++++.||.|++||+
T Consensus 133 ~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 133 FAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp EEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred eccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence 45568999999999999 888999999999999999999999999999999999999999875 7899999999999999
Q ss_pred CCCceeEEec--cCCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCC-CEEEEEeCC
Q 023018 137 SSGNLKCTLE--GPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG-KTICTGSDD 212 (288)
Q Consensus 137 ~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~~~~~d 212 (288)
++++....+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++ ++|++|+.|
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 212 RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred CCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 9988766543 46678999999996 5689999999999999999999999999999999999999987 578999999
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCc
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~t~~ 269 (288)
+.|+|||+++++.+..+. |...|++++|+| ++.+|++++.||+|++|++.+..
T Consensus 292 ~~i~iwd~~~~~~~~~~~----H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 292 CTVAVLDADFSEVFRDLS----HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SCEEEECTTSCEEEEECC----CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CEEEEEECCCCcEeEECC----CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 999999999988776553 888999999999 89999999999999999997643
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.3e-38 Score=262.60 Aligned_cols=224 Identities=21% Similarity=0.238 Sum_probs=190.6
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeE----eeccccCcEEEEEEecCCCEEEEEeCCCeE
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS----EIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (288)
......+|...|++++|+| ++.+ ++++.||+|+|||+.+++... ...+|...|++++|+|++++|++|+.||.|
T Consensus 86 ~~~~~~~~~~~V~~~~~s~-d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v 163 (357)
T 4g56_B 86 LCTAGVQTEAGVTDVAWVS-EKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSV 163 (357)
T ss_dssp GCSEEEECSSCEEEEEEET-TTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EecccCCCCCCEEEEEEcC-CCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 3455678999999999999 5554 467889999999998876443 334789999999999999999999999999
Q ss_pred EEEeCCCCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEEEee--ccCCCeEEEEEcCC-CCEEE
Q 023018 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTCGDFTPD-GKTIC 207 (288)
Q Consensus 132 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~p~-~~~l~ 207 (288)
++||+.+++.+..+..|...|.+++|+|++. ++++++.||.|++||+++++++..+. .+...+++++|+|+ +.+|+
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 9999999999999999999999999999875 78999999999999999988766554 46678999999996 56889
Q ss_pred EEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEe
Q 023018 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYD 283 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~ 283 (288)
+|+.|+.|++||+++++.+..+.. |...|++++|+|++ ++|++|+.||.|+|||+.+++++..+ ..+.+++|+
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~---~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafs 320 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAV---HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWS 320 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECC---CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEEC
T ss_pred EeecccceeEEECCCCcEeEEEec---cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEe
Confidence 999999999999999999888877 77899999999987 67899999999999999999998876 567888998
Q ss_pred e
Q 023018 284 L 284 (288)
Q Consensus 284 ~ 284 (288)
|
T Consensus 321 P 321 (357)
T 4g56_B 321 P 321 (357)
T ss_dssp S
T ss_pred C
Confidence 7
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-37 Score=275.54 Aligned_cols=218 Identities=23% Similarity=0.343 Sum_probs=193.9
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC--eeeEeeccccCcEEEEEEecCCCEEEEEeCC---
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLD--- 128 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--- 128 (288)
......+.+|...|++++|+| ++.+||+|+.||+|+|||+.++ .....+.+|..+|.+++|+|++++|++++.+
T Consensus 49 ~~~~~~~~~h~~~v~~~~~sp-dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC
T ss_pred cccCeEecCCCCceEEEEECC-CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc
Confidence 456788999999999999999 8899999999999999998754 3455778899999999999999999988865
Q ss_pred -CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEE
Q 023018 129 -GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI 206 (288)
Q Consensus 129 -g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l 206 (288)
+.|++|| .++....+.+|...|.+++|+|++. .|++|+.|++|++||.++++.+..+.+|...|++++|+|++++|
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEE
Confidence 4788887 4556677889999999999999887 69999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEcCC----CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 207 CTGSDDATLRVWNPKSGENIHVIRGH----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
++++.|+.|++||+.+++....+... ..|...|.+++|+|++++|++++.|++|++||+.+++++..+
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 99999999999999999888777421 138889999999999999999999999999999998876544
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-37 Score=256.31 Aligned_cols=215 Identities=21% Similarity=0.319 Sum_probs=188.2
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----eeeEeeccccCcEEEEEEec--CCCEEEEEeCCC
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSM--DGQLLASGGLDG 129 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg 129 (288)
....+.+|.++|++++|+| ++.+|++|+.||.|++|++.++ +....+.+|...|++++|+| ++++|++++.||
T Consensus 3 ~~~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CCCEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 4567889999999999999 7889999999999999999876 46677788999999999999 589999999999
Q ss_pred eEEEEeCCCC---------ceeEEeccCCCCEEEEEEcCC--CCEEEEecCCCeEEEEECCcccE---------------
Q 023018 130 LVQIWDPSSG---------NLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAAY--------------- 183 (288)
Q Consensus 130 ~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~--------------- 183 (288)
.|++||+.++ +....+..|...|.+++|+|+ +.+|++++.||.|++||+++++.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999887 457778889999999999999 99999999999999999865431
Q ss_pred ---------------------------------------------EEEeeccCCCeEEEEEcCCC----CEEEEEeCCCe
Q 023018 184 ---------------------------------------------LNMFSGHGSSVTCGDFTPDG----KTICTGSDDAT 214 (288)
Q Consensus 184 ---------------------------------------------~~~~~~~~~~i~~~~~~p~~----~~l~~~~~dg~ 214 (288)
+..+.+|...|++++|+|++ ++|++++.||.
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 34455788999999999998 89999999999
Q ss_pred EEEEeCCCC----------------------------------------------ceeEEEcCCCccccCeEEEEEcCCC
Q 023018 215 LRVWNPKSG----------------------------------------------ENIHVIRGHPYHTEGLTCLTISADS 248 (288)
Q Consensus 215 i~i~d~~~~----------------------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~ 248 (288)
|++||++++ +.+..+.. |...|++++|+|++
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD---HNGEVWSVSWNLTG 318 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECT---TSSCEEEEEECSSS
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec---ccccEEEEEEcCCC
Confidence 999999864 33344444 77899999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 249 TLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 249 ~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
++|++++.||.|++|++.+++.+..+
T Consensus 319 ~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 319 TILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp CCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred CEEEEecCCCcEEEEecCcCcchhhe
Confidence 99999999999999999998776654
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-37 Score=253.32 Aligned_cols=224 Identities=26% Similarity=0.431 Sum_probs=183.7
Q ss_pred eeEe-ec-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC-------CeeeEeeccccCcEEEEEEecCCCEEEEEeC
Q 023018 57 THIF-SG-HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-------GDWASEIQGHKDSVSSLAFSMDGQLLASGGL 127 (288)
Q Consensus 57 ~~~~-~~-h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 127 (288)
...+ .+ |..+|++++|+| ++.+|++|+.|++|+||++.. .+.+..+.+|...|.+++|+|++++|++|+.
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp EEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET
T ss_pred EEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 3445 34 999999999999 788999999999999999853 3566778899999999999999999999999
Q ss_pred CCeEEEEeCCCC----ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc--cEEEEeeccCCCeEEEEEcC
Q 023018 128 DGLVQIWDPSSG----NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA--AYLNMFSGHGSSVTCGDFTP 201 (288)
Q Consensus 128 dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~p 201 (288)
|++|++||+... +.+..+..|...|.+++|+|++.+|++++.|++|++||++++ +++..+.+|...|.+++|+|
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC
Confidence 999999999432 456678889999999999999999999999999999998765 67888999999999999999
Q ss_pred C--CCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--
Q 023018 202 D--GKTICTGSDDATLRVWNPKSG--------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK-- 269 (288)
Q Consensus 202 ~--~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~-- 269 (288)
+ +.+|++++.|+.|++||+..+ .....+.. .|...|.+++|++++ +|++++.||.|++|++.+++
T Consensus 208 ~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~ 284 (330)
T 2hes_X 208 TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD--VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK 284 (330)
T ss_dssp SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS--CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE
T ss_pred CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc--ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceE
Confidence 8 778999999999999998654 22222222 277889999999765 78999999999999999884
Q ss_pred EEEEe-----c-ceEEEEEee
Q 023018 270 VCCLN-----F-QYTCVAYDL 284 (288)
Q Consensus 270 ~~~~~-----~-~~~~~~~~~ 284 (288)
++... . .+.+++|+|
T Consensus 285 ~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 285 VFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp EEEEESCTTTTSCEEEEEEC-
T ss_pred EEeccccccccceEEEEEEec
Confidence 33332 1 577888877
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-36 Score=251.54 Aligned_cols=227 Identities=19% Similarity=0.303 Sum_probs=203.7
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
......+.+|.++|++++|+| ++.+|++|+.||.|++|++.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccccEEEEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 344456899999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEECCccc-----------EEEEeeccCC--CeE
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAA-----------YLNMFSGHGS--SVT 195 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-----------~~~~~~~~~~--~i~ 195 (288)
||+.+++.+..+. +...+.+++|+|+++++++++.+ |.|++||+.... .+..+..|.. .+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999988888 77889999999999999999998 999999987653 3344445555 899
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 196 CGDFTPDGKTICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+++|+|++++|++++.+|.|++||+++ +..+..+.. |...|.+++|+|++.+|++++.||.|++||+.+++.+..+
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL---HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec---CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 999999999999999999999999998 677777776 7789999999999999999999999999999999998877
Q ss_pred ---cceEEEEEeec
Q 023018 275 ---FQYTCVAYDLD 285 (288)
Q Consensus 275 ---~~~~~~~~~~d 285 (288)
..+..++|+|+
T Consensus 257 ~~~~~~~~~~~~~~ 270 (369)
T 3zwl_B 257 ETDCPLNTAVITPL 270 (369)
T ss_dssp ECSSCEEEEEECSS
T ss_pred cCCCCceeEEecCC
Confidence 55677777765
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-38 Score=257.53 Aligned_cols=227 Identities=19% Similarity=0.293 Sum_probs=184.3
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEec--CCCEEEEEeCCCeEEE
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQI 133 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i 133 (288)
..+.+|.++|++++|+| ++.+||+|+.|++|+|||+.++. .+..+.+|..+|++++|++ ++++|++|+.|++|++
T Consensus 7 ~~~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -------CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eecccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 46679999999999999 78899999999999999998875 4677889999999999975 4889999999999999
Q ss_pred EeCCCCc--eeEEeccCCCCEEEEEEcCC--CCEEEEecCCCeEEEEECCccc---EEEEeeccCCCeEEEEEcCC----
Q 023018 134 WDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA---YLNMFSGHGSSVTCGDFTPD---- 202 (288)
Q Consensus 134 ~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~p~---- 202 (288)
||+.+++ ....+.+|...|.+++|+|+ +.+|++|+.||.|++|+++.+. ....+.+|...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 9998873 56677889999999999997 7899999999999999998753 23556678899999999997
Q ss_pred -------------CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCC----CEEEEEeCCCcEEEEEc
Q 023018 203 -------------GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS----TLALSGSKDGSVHMVNI 265 (288)
Q Consensus 203 -------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~ 265 (288)
+.+|++|+.|+.|++||++.......+.....|...|.+++|+|++ .+|++++.||+|++|++
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 4689999999999999997653222222333388899999999986 88999999999999999
Q ss_pred CCC-------cEEEEe-cceEEEEEeec
Q 023018 266 TTG-------KVCCLN-FQYTCVAYDLD 285 (288)
Q Consensus 266 ~t~-------~~~~~~-~~~~~~~~~~d 285 (288)
.++ +.+... ..+.+++|+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 273 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSIT 273 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTT
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCC
Confidence 862 223322 56778888876
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.5e-37 Score=252.72 Aligned_cols=223 Identities=24% Similarity=0.425 Sum_probs=191.4
Q ss_pred eecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC--eeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCC
Q 023018 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (288)
..+|...|++++|+| ++.+|++|+.|+.+++|++..+ +.+..+.+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 57 ~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp CSSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 368999999999999 7889999999999999999876 4567888999999999999999999999999999999998
Q ss_pred CCc---eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCccc--EEEEeeccCCCeEEEEEcCCCCEEEEEeCC
Q 023018 138 SGN---LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (288)
Q Consensus 138 ~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d 212 (288)
++. .+..+..|...|.+++|+|++++|++++.|+.|++|+++++. +...+.+|...|++++|+|++++|++++.|
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp TTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 764 355677899999999999999999999999999999998764 457788999999999999999999999999
Q ss_pred CeEEEEeCCCC---------------ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--------
Q 023018 213 ATLRVWNPKSG---------------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK-------- 269 (288)
Q Consensus 213 g~i~i~d~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~-------- 269 (288)
+.|++|+.... ..+..+.+. |...|.+++|+|++..|++++.|+.|++|++.++.
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF--HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS--CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCC--CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence 99999996322 122233332 67889999999999999999999999999987653
Q ss_pred EEEEe-----cceEEEEEeec
Q 023018 270 VCCLN-----FQYTCVAYDLD 285 (288)
Q Consensus 270 ~~~~~-----~~~~~~~~~~d 285 (288)
..... ..+.+++|+|+
T Consensus 294 ~~~~~~~~h~~~V~~v~~~p~ 314 (345)
T 3fm0_A 294 LTAHLHQAHSQDVNCVAWNPK 314 (345)
T ss_dssp EEEEETTSSSSCEEEEEECSS
T ss_pred EEeeecccccCcEeEeEEeCC
Confidence 11111 45788999886
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.6e-37 Score=271.49 Aligned_cols=233 Identities=23% Similarity=0.385 Sum_probs=197.7
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
......+.+|...|++++|+|++..+|++|+.|++|++|+..+++....+.+|...|++++|+|++++|++|+.|++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 34556788999999999999955567999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCceeEEec-------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEE---------------------
Q 023018 134 WDPSSGNLKCTLE-------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN--------------------- 185 (288)
Q Consensus 134 ~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------------------- 185 (288)
||+.+++....+. +|.+.|.+++|+|++++|++++.|++|++||+++++.+.
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 9999998888774 689999999999999999999999999999998765543
Q ss_pred ----------------------EeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC-C----------
Q 023018 186 ----------------------MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRG-H---------- 232 (288)
Q Consensus 186 ----------------------~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~---------- 232 (288)
.+.+|...|++++|+|++++|++++.|+.|++||+.++.....+.. +
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s 376 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 376 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEEC
Confidence 3346888999999999999999999999999999987654322100 0
Q ss_pred ---------------------------------------------C-----------------------ccccCeEEEEE
Q 023018 233 ---------------------------------------------P-----------------------YHTEGLTCLTI 244 (288)
Q Consensus 233 ---------------------------------------------~-----------------------~~~~~v~~~~~ 244 (288)
. .+...+.+++|
T Consensus 377 ~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 377 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVAL 456 (611)
T ss_dssp TTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEE
T ss_pred CCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEE
Confidence 0 01234678999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCCcEE--EEe---cceEEEEEeecc
Q 023018 245 SADSTLALSGSKDGSVHMVNITTGKVC--CLN---FQYTCVAYDLDF 286 (288)
Q Consensus 245 ~~~~~~l~~~~~dg~i~iwd~~t~~~~--~~~---~~~~~~~~~~df 286 (288)
+|+|++|++|+.||.|++|++.+++.. ... ..+.+++|+|+-
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg 503 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 503 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTS
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCC
Confidence 999999999999999999999887542 222 568889998873
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-36 Score=251.18 Aligned_cols=223 Identities=21% Similarity=0.297 Sum_probs=190.0
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
.+...+.+|...|++++|+| ++.++++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~w 145 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLW 145 (343)
T ss_dssp EEEEEECCCSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEE
T ss_pred cccchhccCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEE
Confidence 45678899999999999999 78899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeEEec---cCCCCEEEEEEcCCC----------CEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcC
Q 023018 135 DPSSGNLKCTLE---GPGGGVEWVSWHPRG----------HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP 201 (288)
Q Consensus 135 d~~~~~~~~~~~---~~~~~i~~~~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p 201 (288)
|+.... ..... .|...+.+++|+|.+ .+|++++.||.|++||. ..+....+..|...|.+++|+|
T Consensus 146 d~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 146 NILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp ESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECT
T ss_pred eccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECC
Confidence 998443 33332 577889999999976 79999999999999994 5667778889999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE--Ee----
Q 023018 202 DGKTICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC--LN---- 274 (288)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~--~~---- 274 (288)
++++|++|+.||.|++||+.. ......+. +...|.+++|+|++.+|+++ .|+.|++|++.+++... .+
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILNLTYPQREFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCS
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCc
Confidence 999999999999999999943 44444443 34569999999999887655 58889999998876543 22
Q ss_pred -----------cceEEEEEeec
Q 023018 275 -----------FQYTCVAYDLD 285 (288)
Q Consensus 275 -----------~~~~~~~~~~d 285 (288)
..+.+++|+|+
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSS
T ss_pred chhhhhhcCCCCceEEEEECCC
Confidence 23577888876
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-37 Score=255.24 Aligned_cols=227 Identities=19% Similarity=0.297 Sum_probs=196.2
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEcc--CCeeeEeeccccCcEEEEEEecC--CCEEEEEeCCCe
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGL 130 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~ 130 (288)
+++..+.+|.++|++++|+| ++.+||+|+.||.|++|++. +.+.+..+.+|...|++++|+++ +++|++++.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 45678999999999999999 78899999999999999998 56677788899999999999976 899999999999
Q ss_pred EEEEeCCCCc--eeEEeccCCCCEEEEEEcCC--CCEEEEecCCCeEEEEECCccc--EEEEeeccCCCeEEEEEcC---
Q 023018 131 VQIWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTP--- 201 (288)
Q Consensus 131 i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~p--- 201 (288)
|++||+.+++ ....+..|...|.+++|+|+ +.+|++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999987 67777889999999999998 9999999999999999998873 4456678999999999999
Q ss_pred ----------CCCEEEEEeCCCeEEEEeCCCCcee----EEEcCCCccccCeEEEEEcCC---CCEEEEEeCCCcEEEEE
Q 023018 202 ----------DGKTICTGSDDATLRVWNPKSGENI----HVIRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVN 264 (288)
Q Consensus 202 ----------~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd 264 (288)
++.+|++++.||.|++||++++... ..+.. |...|.+++|+|+ +.+|++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec---ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999999999999876532 34444 7889999999999 89999999999999999
Q ss_pred cCCCc---EEEEe------cceEEEEEeec
Q 023018 265 ITTGK---VCCLN------FQYTCVAYDLD 285 (288)
Q Consensus 265 ~~t~~---~~~~~------~~~~~~~~~~d 285 (288)
+.+++ ....+ ..+.+++|+|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 267 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLS 267 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSS
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCC
Confidence 99874 22222 45677888776
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.8e-38 Score=261.96 Aligned_cols=216 Identities=23% Similarity=0.428 Sum_probs=192.6
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee-----ccccCcEEEEEEec-CCCEEEEEeCC
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-----QGHKDSVSSLAFSM-DGQLLASGGLD 128 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-----~~~~~~i~~~~~~~-~~~~l~~~~~d 128 (288)
.....+.+|.+.|.+++|+|.++..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++.+|++|+.|
T Consensus 148 ~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D 227 (380)
T 3iz6_a 148 PVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD 227 (380)
T ss_dssp TTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT
T ss_pred cceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC
Confidence 3456788999999999999976778999999999999999999888776 57899999999987 78899999999
Q ss_pred CeEEEEeCC-CCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-------CCeEEEEEc
Q 023018 129 GLVQIWDPS-SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-------SSVTCGDFT 200 (288)
Q Consensus 129 g~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------~~i~~~~~~ 200 (288)
|+|++||++ .++.+..+.+|.+.|.+++|+|++++|++|+.||+|++||+++++.+..+..+. ..+++++|+
T Consensus 228 ~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 307 (380)
T 3iz6_a 228 TTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS 307 (380)
T ss_dssp SCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC
T ss_pred CeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC
Confidence 999999998 457788889999999999999999999999999999999999998888776433 248999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCC-CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 201 PDGKTICTGSDDATLRVWNPKSGENIHVIRGH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 201 p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
|++++|++|+.||.|++||+.+++.+..+... ..|...|.+++|+|++.+|++|+.||.|++|++..++.
T Consensus 308 ~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 308 ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 99999999999999999999988887777322 34888999999999999999999999999999987653
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.1e-36 Score=247.63 Aligned_cols=228 Identities=25% Similarity=0.413 Sum_probs=203.0
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-----eeEeeccccCcEEEEEEecCCCEEEEEeCCC
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----WASEIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (288)
....+|+||.+.|++|+|+|+++.+||+|+.||+|+|||+.+.+ +...+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 44567999999999999999668899999999999999997643 5667889999999999999999999999999
Q ss_pred eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccE-EEEeeccCCCeEEEEEcCCC--CEE
Q 023018 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY-LNMFSGHGSSVTCGDFTPDG--KTI 206 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~p~~--~~l 206 (288)
.|++|+............+...+..+.+++.+.+|++++.|+.+++||+..... ......|...+..++|++++ .++
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 999999999988888888888999999999999999999999999999976543 34456788999999999854 578
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEe
Q 023018 207 CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYD 283 (288)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~ 283 (288)
++++.|+.|++||+++++.+..+.. |..+|++++|+|++++|++|+.||.|++||+++++++..+ ..+.++.|+
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~ 265 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIG---HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFS 265 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCceeeEecC---CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecC
Confidence 8999999999999999998888876 7889999999999999999999999999999999998877 456777777
Q ss_pred ec
Q 023018 284 LD 285 (288)
Q Consensus 284 ~d 285 (288)
|+
T Consensus 266 ~~ 267 (340)
T 4aow_A 266 PN 267 (340)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-36 Score=254.86 Aligned_cols=205 Identities=28% Similarity=0.483 Sum_probs=181.0
Q ss_pred ecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccC------------------cEEEEEEecCCCEE
Q 023018 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD------------------SVSSLAFSMDGQLL 122 (288)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~l 122 (288)
.+|.+.|++++|+| ++.+||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++++|
T Consensus 61 ~~h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 61 LDHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred cCCCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 36999999999999 788998876 68999999999988877765432 48999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcC-
Q 023018 123 ASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP- 201 (288)
Q Consensus 123 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p- 201 (288)
++|+.||.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||+++++....+. +...+.+++|+|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999998877776 567899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcCC----CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGH----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
++++|++|+.||.|++||++++..+..+... ..|...|.+++|+|++.+|++|+.||.|++||++++
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 8999999999999999999998877766321 237889999999999999999999999999999864
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-38 Score=266.53 Aligned_cols=223 Identities=11% Similarity=0.132 Sum_probs=188.2
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC--eeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEe
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (288)
..+..|.++|++++|+| ++.+||+|+.||.|++|++.++ +.+..+.+|...|++++|+|++++|++++.||.|++||
T Consensus 5 ~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEEEECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred eeEecCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 44566788999999999 8889999999999999999988 77888899999999999999999999999999999999
Q ss_pred CCCCc---eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCccc---EEEEeec-cCCCeEEEEEcCCCCEEEE
Q 023018 136 PSSGN---LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA---YLNMFSG-HGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 136 ~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~-~~~~i~~~~~~p~~~~l~~ 208 (288)
+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|++++|+|++++|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 99877 666777899999999999999999999999999999999876 3677777 9999999999999999999
Q ss_pred EeCCCeEEEEeCCC------------------CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 209 GSDDATLRVWNPKS------------------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 209 ~~~dg~i~i~d~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
++.|+.|++||+.. ++.+..+ .|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99999999999853 2233333 3888999999999999999999999999999999987
Q ss_pred ----EEEe----cceEEEEEeec
Q 023018 271 ----CCLN----FQYTCVAYDLD 285 (288)
Q Consensus 271 ----~~~~----~~~~~~~~~~d 285 (288)
+..+ ..+.+++|+|+
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~ 262 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANE 262 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEET
T ss_pred cceeeEeecCCCCceEEEEEcCC
Confidence 4444 45788888876
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-37 Score=266.19 Aligned_cols=218 Identities=16% Similarity=0.162 Sum_probs=186.4
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCee--eEeeccccCcEEEEEEec-CCCEEEEEeCCCeEE
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW--ASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQ 132 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~ 132 (288)
......+|...|+||+|+|.++.+||+|+.||.|+|||+.+++. ...+.+|.+.|++++|+| ++.+|++|+.||+|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 34566789999999999998888999999999999999987654 344568999999999998 678999999999999
Q ss_pred EEeCCCCceeEEecc--CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCC-EEEEE
Q 023018 133 IWDPSSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-TICTG 209 (288)
Q Consensus 133 i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~~ 209 (288)
+||+.++........ +...+.+++|+|++.+|++|+.||.|++||++ ++.+..+.+|...|++++|+|++. +|++|
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEe
Confidence 999987654433332 33457889999999999999999999999986 456778889999999999999876 78899
Q ss_pred eCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+.|+.|++||++++.....+.....|...|++++|+|++.+|++++.||.|++||+.++++...+
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 99999999999987665555444448889999999999999999999999999999999877765
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.6e-36 Score=245.05 Aligned_cols=213 Identities=19% Similarity=0.282 Sum_probs=182.5
Q ss_pred CCeeEeecCCCCEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEecC--CCEEEEEeCCC
Q 023018 55 DSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLDG 129 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg 129 (288)
+.+..+.+|.++|++++|+|. ++.+|++|+.||+|++|++.+++ .+..+..|...|.+++|+|+ +.+|++++.||
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 567889999999999999863 37899999999999999998764 55667789999999999997 88999999999
Q ss_pred eEEEEeCCCCc--eeEEeccCCCCEEEEEEcCC-------------CCEEEEecCCCeEEEEECCccc----EEEEeecc
Q 023018 130 LVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPR-------------GHIVLAGSEDSTVWMWNADRAA----YLNMFSGH 190 (288)
Q Consensus 130 ~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~ 190 (288)
.|++||++++. ....+..|...|.+++|+|+ +++|++|+.|++|++||++++. ....+.+|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763 24567789999999999996 5799999999999999998765 56778899
Q ss_pred CCCeEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCc--eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 023018 191 GSSVTCGDFTPDG---KTICTGSDDATLRVWNPKSGE--NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (288)
Q Consensus 191 ~~~i~~~~~~p~~---~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 265 (288)
...|++++|+|++ .+|++++.|+.|++||+.+.. ....+.....+...|.+++|+|++++|++++.||.|++|+.
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 9999999999984 889999999999999987643 12222212236788999999999999999999999999998
Q ss_pred CC
Q 023018 266 TT 267 (288)
Q Consensus 266 ~t 267 (288)
..
T Consensus 284 ~~ 285 (297)
T 2pm7_B 284 NL 285 (297)
T ss_dssp CT
T ss_pred CC
Confidence 73
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.2e-36 Score=250.50 Aligned_cols=224 Identities=16% Similarity=0.187 Sum_probs=198.1
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeC
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (288)
.+..|.++|++++|+| ++.+|++++.||.|++|++.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 4567999999999999 78899999999999999999987 88889899999999999999999999999999999999
Q ss_pred CCCceeEE--eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccE---E-EEeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 137 SSGNLKCT--LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY---L-NMFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 137 ~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~-~~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
.+++.... +..|...|.+++|+|++++|++++.+|.|++||++.+.. . .....|...|.+++|+|++++|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 88875444 356888999999999999999999999999999988752 2 33356789999999999999999999
Q ss_pred CCCeEEEEeCC------------------CCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 211 DDATLRVWNPK------------------SGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 211 ~dg~i~i~d~~------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
.||.|++||++ .++.+..+.. |...|.+++|+|++.+|++++.||.|++||+.+++++.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS---SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC---CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCC---CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 99999999954 5666666664 77899999999999999999999999999999999998
Q ss_pred Ee----cceEEEEEeecc
Q 023018 273 LN----FQYTCVAYDLDF 286 (288)
Q Consensus 273 ~~----~~~~~~~~~~df 286 (288)
.+ ..+.+++|+|+-
T Consensus 239 ~~~~~~~~v~~~~~~~~~ 256 (372)
T 1k8k_C 239 TLASETLPLLAVTFITES 256 (372)
T ss_dssp EEECSSCCEEEEEEEETT
T ss_pred EEccCCCCeEEEEEecCC
Confidence 87 367888888763
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.2e-35 Score=241.01 Aligned_cols=218 Identities=17% Similarity=0.267 Sum_probs=198.5
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCC
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (288)
+|...|++++|+| ++.+|++++.||.|++|++.+++ ....+..|...|.+++|+|++++|++++.+|.|++||+.++
T Consensus 95 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~ 173 (337)
T 1gxr_A 95 NRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ 173 (337)
T ss_dssp CTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 7999999999999 78899999999999999999876 56677789999999999999999999999999999999999
Q ss_pred ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEe
Q 023018 140 NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWN 219 (288)
Q Consensus 140 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d 219 (288)
+....+..|...+.+++|+|++++|++++.+|.|++||+++++.+..+. +...+.+++|+|++++|++++.++.|++||
T Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 174 TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 9999999999999999999999999999999999999999998887775 778899999999999999999999999999
Q ss_pred CCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
+.++... .+.. |...|.+++|+|++++|++++.||.|++|++.+++.+... ..+.+++|+|+
T Consensus 253 ~~~~~~~-~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 253 VNKPDKY-QLHL---HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVD 317 (337)
T ss_dssp TTSSCEE-EECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTT
T ss_pred CCCCCeE-EEcC---CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCC
Confidence 9987654 3443 7889999999999999999999999999999999988655 56778888775
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.9e-36 Score=253.38 Aligned_cols=230 Identities=20% Similarity=0.365 Sum_probs=200.4
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC-------eeeEeeccccCcEEEEEEecCC-CEEEEEe
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-------DWASEIQGHKDSVSSLAFSMDG-QLLASGG 126 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~ 126 (288)
.....+.+|.++|++++|+|.++.+|++|+.||.|++|++.++ +.+..+.+|...|.+++|+|++ .+|++++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 4566788999999999999977789999999999999999987 5678888999999999999998 6999999
Q ss_pred CCCeEEEEeCCCCceeEEe--ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEe-eccCCC-eEEEEEcCC
Q 023018 127 LDGLVQIWDPSSGNLKCTL--EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSS-VTCGDFTPD 202 (288)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~~p~ 202 (288)
.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|... +.++.|+|+
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 9999999999999999998 789999999999999999999999999999999999998888 677765 899999999
Q ss_pred CCEEEEE---eCCCeEEEEeCCCCce-eEEEcCCCccccCeEEEEEcCCCCEEEE-EeCCCcEEEEEcCCCcE-EEEe--
Q 023018 203 GKTICTG---SDDATLRVWNPKSGEN-IHVIRGHPYHTEGLTCLTISADSTLALS-GSKDGSVHMVNITTGKV-CCLN-- 274 (288)
Q Consensus 203 ~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~t~~~-~~~~-- 274 (288)
+.+|++| +.++.|++||++++.. +...... +...+.+++|+|++.+|++ |+.||.|++|++.+++. +..+
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELD--TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC--CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEecc--CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc
Confidence 9999999 7899999999998764 3333211 5677999999999998864 55799999999999883 3332
Q ss_pred ----cceEEEEEeecc
Q 023018 275 ----FQYTCVAYDLDF 286 (288)
Q Consensus 275 ----~~~~~~~~~~df 286 (288)
..+.+++|+|+-
T Consensus 310 ~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 310 FSSKESQRGMGYMPKR 325 (402)
T ss_dssp ECCSSCCSEEEECCGG
T ss_pred cccCCcccceEEeccc
Confidence 557888888874
No 44
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=247.72 Aligned_cols=236 Identities=15% Similarity=0.235 Sum_probs=195.9
Q ss_pred CCCCCCCeeEeecCCCCEEEEEEcCCC--CcEEEEEeCCCeEEEEEccC-Ceee-EeeccccCcEEEEEEecCCCEEEEE
Q 023018 50 TEQPDDSTHIFSGHSDEVYSVACSPTD--ATLVATGGGDDKGFFWRINQ-GDWA-SEIQGHKDSVSSLAFSMDGQLLASG 125 (288)
Q Consensus 50 ~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~~~~~dg~i~iw~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~ 125 (288)
...+.+.+..+.+|.+.|++++|+|.. +.+|++|+.||.|++|++.+ +..+ ..+.+|...|++++|+|++++|+++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 455677888999999999999999944 69999999999999999997 4444 6788899999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEeccCCCCEEEEEE--cCCCCEEEEecCCCeEEEEECCcccEEEEeeccC------------
Q 023018 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSW--HPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG------------ 191 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------ 191 (288)
+.||.|++||+.+++... +..|...|.+++| +|++++|++++.||.|++||+++++++..+..+.
T Consensus 105 ~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMA 183 (368)
T ss_dssp ETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEE
T ss_pred cCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCee
Confidence 999999999999988766 4568899999999 8899999999999999999999887666555332
Q ss_pred -----------------------------CCeEEEEEcCCCCE----EEEEeCCCeEEEEeCCCC---ceeEEEcCCCc-
Q 023018 192 -----------------------------SSVTCGDFTPDGKT----ICTGSDDATLRVWNPKSG---ENIHVIRGHPY- 234 (288)
Q Consensus 192 -----------------------------~~i~~~~~~p~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~- 234 (288)
..+.++.+.+.... +++++.||.|++||++.. .....+..+..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 23444555444433 999999999999999877 45566665311
Q ss_pred --------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeecc
Q 023018 235 --------HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLDF 286 (288)
Q Consensus 235 --------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~df 286 (288)
+...|.+++|+|++++|++++.||.|++||+.+++++..+ ..+.+++|+|+-
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTS
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCC
Confidence 1227999999999999999999999999999999999887 457788888763
No 45
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-35 Score=260.85 Aligned_cols=224 Identities=33% Similarity=0.553 Sum_probs=203.0
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
.......+.+|..+|.+++|+| ++.+|++++.||.|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 333 ~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 333 NGQHLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCCeeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 3456678889999999999999 8889999999999999995 5677888899999999999999999999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCC
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d 212 (288)
+|+. +++.+..+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 9995 56778888999999999999999999999999999999996 567888899999999999999999999999999
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
+.|++||. +++.+..+.+ |...|++++|+|++++|++++.||.|++||. +++++..+ ..+.+++|+||
T Consensus 489 ~~i~iw~~-~~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 489 KTVKLWNR-NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp SEEEEEET-TSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTT
T ss_pred CEEEEEcC-CCCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC
Confidence 99999995 6778888877 7889999999999999999999999999995 67888877 45677888876
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1e-35 Score=268.06 Aligned_cols=214 Identities=21% Similarity=0.364 Sum_probs=192.4
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
.....+.+|...|++++|+| ++.+|++|+.||.|+|||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 499 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 499 (694)
T ss_dssp EEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred cccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 45678899999999999999 88899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeEEe---ccCCCCEEEEEEcCCC--CEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEE
Q 023018 135 DPSSGNLKCTL---EGPGGGVEWVSWHPRG--HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG 209 (288)
Q Consensus 135 d~~~~~~~~~~---~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~ 209 (288)
|+......... .+|...|.+++|+|++ ..|++++.|++|++||+++++....+.+|...|++++|+|++++|++|
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 98765433332 3577889999999976 589999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+.||.|++||+++++.+..+. +...+.+++|+|++.+|++++ ++.|++||+.+++++..+
T Consensus 580 ~~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 580 GKDGVVLLWDLAEGKKLYSLE----ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp ETTSBCEEEETTTTEEEECCB----CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred eCCCeEEEEECCCCceEEEec----CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhh
Confidence 999999999999998877665 456799999999998887765 566999999999988765
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-35 Score=242.94 Aligned_cols=222 Identities=20% Similarity=0.345 Sum_probs=197.5
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeee---Eeec--cccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA---SEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
....+|..+|++++|+| ++.+|++++ ||.|++|++.++... ..+. .|...|.+++|+|++++|++++.+|.|+
T Consensus 45 ~~~~~h~~~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EEEECCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred ceeccCCCceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 34458999999999999 788898988 999999999876432 2332 6889999999999999999999999999
Q ss_pred EEeCCCCc--eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 133 i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
+||+.+++ ....+..|...+.+++|+|+++++++++.+|.|++||+++++.+..+..|...+.+++|+|++++|++++
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe
Confidence 99999887 5667778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
.||.|++||+++++.+..+. +...+.+++|+|++.+|++++.+|.|++|++.+++..... ..+.+++|+|+
T Consensus 203 ~dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQHD----FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYC 276 (337)
T ss_dssp TTSEEEEEETTTTEEEEEEE----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTT
T ss_pred cCCcEEEEECCCCceEeeec----CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCC
Confidence 99999999999998887775 5678999999999999999999999999999998876554 55778888765
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.3e-36 Score=272.76 Aligned_cols=229 Identities=21% Similarity=0.307 Sum_probs=212.0
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
-...+.+.+|.+.|++++|+| ++.+||+|+.+|.|+||++.+++.+..+..|..+|++++|+|++++|++++.||.|++
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred cccceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 456789999999999999999 8889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-cEEEEeeccCCCeEEEEEcC-CCCEEEEEeC
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTP-DGKTICTGSD 211 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~p-~~~~l~~~~~ 211 (288)
|++.+++.+..+..|.+.|.+++|+|++++|++++.||.|++|+++++ .....+..|..+|.+++|+| ++..|++++.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999887 67788888999999999999 8899999999
Q ss_pred CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
||.|++||+.++.....+..+ +...+.+++|+| ++.+|++++.||.|++||+.+++++..+ ..+.+++|+|+
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 999999999988877777653 457899999999 9999999999999999999999988877 45778888876
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1e-35 Score=249.68 Aligned_cols=216 Identities=18% Similarity=0.211 Sum_probs=190.3
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec--cccCcEEEEEEec-CCCEEEEEeCCC
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSM-DGQLLASGGLDG 129 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~dg 129 (288)
+......+.+|...|++++|+|++..+|++|+.||.|++|++.+++....+. +|...|.+++|+| ++.+|++++.||
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3455778899999999999999444899999999999999999887776665 6999999999999 678999999999
Q ss_pred eEEEEeCCCCceeEEeccC---CCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCC-E
Q 023018 130 LVQIWDPSSGNLKCTLEGP---GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-T 205 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~-~ 205 (288)
.|++||+.. .....+..+ ...|.+++|+|++++|++++.||.|++||+ +++.+..+..|...|.+++|+|+++ +
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 999999986 444555443 378999999999999999999999999999 5778889999999999999999998 9
Q ss_pred EEEEeCCCeEEEEeCCC----CceeEEEcCCCccccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 206 ICTGSDDATLRVWNPKS----GENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|++++.|+.|++||+++ +..+..+. |...|.+++|+| ++.+|++++.||.|++||+++++.+..+
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMP----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEE----CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEec----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 99999999999999987 55566553 788999999999 9999999999999999999998776554
No 50
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.8e-36 Score=255.13 Aligned_cols=226 Identities=19% Similarity=0.346 Sum_probs=196.6
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC----------CeeeEeeccccCcEEEEEEecCCC-EEEEE
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----------GDWASEIQGHKDSVSSLAFSMDGQ-LLASG 125 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 125 (288)
.....+|.+.|++++|+|+++.+||+++.+|.|++|++.+ ...+..+.+|...|++++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 4566789999999999996578999999999999999987 577788889999999999999988 99999
Q ss_pred eCCCeEEEEeCCCCce-------eEEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcc---cEEEEeeccCCCe
Q 023018 126 GLDGLVQIWDPSSGNL-------KCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRA---AYLNMFSGHGSSV 194 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~i 194 (288)
+.||.|++|++..+.. ...+..|...|.+++|+| ++.+|++++.+|.|++||++++ +.+..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987422 455678889999999999 7789999999999999999987 5777788899999
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCCC-CceeEEEcCCCccccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCC----
Q 023018 195 TCGDFTPDGK-TICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITT---- 267 (288)
Q Consensus 195 ~~~~~~p~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~t---- 267 (288)
++++|+|++. +|++|+.||.|++||+++ +..+..+.. |...|.+++|+|++ .+|++++.||.|++||+.+
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 9999999887 688999999999999997 456777776 77899999999988 5789999999999999987
Q ss_pred ----------CcEEEEe----cceEEEEEeec
Q 023018 268 ----------GKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 268 ----------~~~~~~~----~~~~~~~~~~d 285 (288)
.+++... ..+.+++|+|+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 389 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 389 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSS
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCC
Confidence 3556555 34778888776
No 51
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-35 Score=260.68 Aligned_cols=205 Identities=34% Similarity=0.583 Sum_probs=189.7
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeE
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (288)
...+.+..+.+|..+|++++|+| ++.+|++++.|+.|++|+. +++.+..+.+|...|++++|+|++++|++++.|+.|
T Consensus 373 ~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 373 RNGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTV 450 (577)
T ss_dssp TTCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEE
Confidence 34567788899999999999999 7889999999999999995 567788889999999999999999999999999999
Q ss_pred EEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC
Q 023018 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 132 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
++|+. +++.+..+..|...|.+++|+|++++|++++.|+.|++||. +++++..+.+|...|++++|+|++++|++++.
T Consensus 451 ~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 451 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp EEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 99996 56778888899999999999999999999999999999995 67889999999999999999999999999999
Q ss_pred CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
||.|++||. +++.+..+.+ |...|++++|+|++++|++++.||.|++||
T Consensus 529 dg~v~lwd~-~~~~~~~~~~---h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTG---HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSEEEEECT-TSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCEEEEEeC-CCCEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999996 6788888877 788999999999999999999999999997
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-35 Score=252.25 Aligned_cols=229 Identities=19% Similarity=0.270 Sum_probs=193.3
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
......+.+|...|++++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 445566679999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCceeEEecc---CCCCEEEE---------------------EEcCCCCEEEEecCCCeEEEEECCcccEEEEee-
Q 023018 134 WDPSSGNLKCTLEG---PGGGVEWV---------------------SWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS- 188 (288)
Q Consensus 134 ~d~~~~~~~~~~~~---~~~~i~~~---------------------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 188 (288)
||+.+++.+..+.. +...+.++ +|+|++++|++++.||.|++||+++++.+..+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 99999998888864 33344444 457889999999999999999999988776665
Q ss_pred ccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 189 GHGSSVTCGDFTPDGK-TICTGSDDATLRVWNPKSGEN-IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 189 ~~~~~i~~~~~~p~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
.|...|++++|+|++. +|++|+.||.|++||+++++. +..+..+ +...+.++.+ +++.+|++++.||.|++|++.
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN--EGTPINNVYF-AAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES--TTSCEEEEEE-ETTEEEEEETTTEEEEEEEEC
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc--CCCCceEEEe-CCCCEEEEecCCccEEEEecc
Confidence 4788999999999998 999999999999999998754 6666654 5667888855 578899999999999999998
Q ss_pred CCcE----------EEEe---cceEEEEEeecc
Q 023018 267 TGKV----------CCLN---FQYTCVAYDLDF 286 (288)
Q Consensus 267 t~~~----------~~~~---~~~~~~~~~~df 286 (288)
+... .... ..+..++|+|+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 365 DPESERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp CTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred CCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence 7321 1111 457788888874
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.7e-35 Score=247.96 Aligned_cols=220 Identities=20% Similarity=0.216 Sum_probs=195.2
Q ss_pred CCCeeEeecCCCCEEEEEEcCCC----C---cEEEEEeCCCeEEEEEccCCee-----eEeeccc-----cCcEEEEEEe
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTD----A---TLVATGGGDDKGFFWRINQGDW-----ASEIQGH-----KDSVSSLAFS 116 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~----~---~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~-----~~~i~~~~~~ 116 (288)
......+.+|..+|++++|+| + + .+|++++.||.|++|++.+++. ...+..| ...|.+++|+
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred CCcceEEecCCCcEEEEEEec-ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEe
Confidence 346788899999999999999 6 7 8999999999999999998876 7888888 5899999999
Q ss_pred ----cCCCE-EEEEeCCCeEEEEeCCC------CceeE-----Ee-------ccCCCCEEEEEEcCCCCEEEEecCCCeE
Q 023018 117 ----MDGQL-LASGGLDGLVQIWDPSS------GNLKC-----TL-------EGPGGGVEWVSWHPRGHIVLAGSEDSTV 173 (288)
Q Consensus 117 ----~~~~~-l~~~~~dg~i~i~d~~~------~~~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i 173 (288)
|++++ |++++.||.|++||+.+ ++.+. .+ ..|...+.+++|+|++ +|++++.+|.|
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99999 99999999999999988 66555 66 4478889999999999 99999999999
Q ss_pred EEEECCcccEEEEeec---c---CCCeEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeEEEcCCC----------c
Q 023018 174 WMWNADRAAYLNMFSG---H---GSSVTCGDFTPDGKTICTGSDD---ATLRVWNPKSGENIHVIRGHP----------Y 234 (288)
Q Consensus 174 ~i~d~~~~~~~~~~~~---~---~~~i~~~~~~p~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~----------~ 234 (288)
++||+++++.+..+.. | ...|.+++|+|++.+|++++.| |.|++||+++++.+..+.... .
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 9999999999999998 8 9999999999999999999999 999999999998888876511 1
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec
Q 023018 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNF 275 (288)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~ 275 (288)
|...|.+++|+|++.+|++++.||.|++||+.+++++..+.
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 56789999999999999999999999999999999888775
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-35 Score=250.12 Aligned_cols=206 Identities=19% Similarity=0.216 Sum_probs=182.5
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEe
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (288)
.+....|+| ++.+|++|+.||.|++|++.+++....+.+|...|++++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 99 ~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 99 YTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp EEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred ceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 344456777 7889999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeec---cCCCeEE---------------------EEEcC
Q 023018 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG---HGSSVTC---------------------GDFTP 201 (288)
Q Consensus 146 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~---------------------~~~~p 201 (288)
..|...|.+++|+|++++|++++.||.|++||+++++.+..+.. +...+.+ ++|+|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 99999999999999999999999999999999999998888874 3344444 45578
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcE-EEEe
Q 023018 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGKV-CCLN 274 (288)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~t~~~-~~~~ 274 (288)
++++|++++.||.|++||+++++....+... |...|.+++|+|++. +|++|+.||.|++||+++++. +..+
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSK--FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCT--TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccc--cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhh
Confidence 8999999999999999999999887777543 678899999999998 999999999999999999754 4433
No 55
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=244.42 Aligned_cols=220 Identities=22% Similarity=0.400 Sum_probs=189.6
Q ss_pred eecCCCCEEEEEEcCCCCc-EEEEEeCCCeEEEEEc----cCCe------eeEeecc----------ccCcEEEEEEecC
Q 023018 60 FSGHSDEVYSVACSPTDAT-LVATGGGDDKGFFWRI----NQGD------WASEIQG----------HKDSVSSLAFSMD 118 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~-~l~~~~~dg~i~iw~~----~~~~------~~~~~~~----------~~~~i~~~~~~~~ 118 (288)
...|.++|++++|+| ++. +||+|+.||.|++|++ .+++ ....+.. |...|++++|+|+
T Consensus 41 ~~~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEEECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeeccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 344669999999999 666 9999999999999999 8777 4444443 6779999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEE-------------
Q 023018 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN------------- 185 (288)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------------- 185 (288)
+++|++++.||.|++|+ .+++.+..+..|...|.+++|+|++++|++++.+|.|++||+++++.+.
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 99999999999999999 6778888899999999999999999999999999999999998765433
Q ss_pred -------------------------------------------EeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 023018 186 -------------------------------------------MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (288)
Q Consensus 186 -------------------------------------------~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~ 222 (288)
.+..|...|.+++|+|++++|++++.||.|++||+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 2335678899999999999999999999999999999
Q ss_pred CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 223 GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
++....+.. |...|.+++|+|++ +|++++.||.|++||+.+++++..+ ..+.+++|+|+
T Consensus 279 ~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 279 GNSQNCFYG---HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp BSCSEEECC---CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT
T ss_pred CccceEecC---CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC
Confidence 988888876 67899999999999 9999999999999999999988877 45777888775
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.2e-36 Score=244.17 Aligned_cols=208 Identities=21% Similarity=0.322 Sum_probs=178.7
Q ss_pred CeeEeecCCCCEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCC--eeeEeeccccCcEEEEEEecC--CCEEEEEeCCCe
Q 023018 56 STHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGL 130 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~ 130 (288)
.+..+.+|.++|++++|+|. ++.+|++|+.|++|++||+.++ .....+.+|...|.+++|+|+ +.+|++|+.||.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 46788999999999999863 4789999999999999999876 356677889999999999997 779999999999
Q ss_pred EEEEeCCCCce---eEEeccCCCCEEEEEEcCC-----------------CCEEEEecCCCeEEEEECCcc---cEEEEe
Q 023018 131 VQIWDPSSGNL---KCTLEGPGGGVEWVSWHPR-----------------GHIVLAGSEDSTVWMWNADRA---AYLNMF 187 (288)
Q Consensus 131 i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~ 187 (288)
|++|++..+.. ...+..|...+.+++|+|+ +++|++|+.|+.|++||++.. +++..+
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 99999987632 3445678889999999997 468999999999999999754 467788
Q ss_pred eccCCCeEEEEEcCCC----CEEEEEeCCCeEEEEeCCCCc----eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCc
Q 023018 188 SGHGSSVTCGDFTPDG----KTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (288)
Q Consensus 188 ~~~~~~i~~~~~~p~~----~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 259 (288)
.+|...|++++|+|++ .+|++++.|+.|++|++.+.. ....+.. |...|.+++|+|++.+|++++.||.
T Consensus 209 ~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~---~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK---FNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE---CSSCEEEEEECTTTCCEEEEESSSC
T ss_pred ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc---CCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 8999999999999986 889999999999999987631 1223333 6788999999999999999999999
Q ss_pred EEEEEcC
Q 023018 260 VHMVNIT 266 (288)
Q Consensus 260 i~iwd~~ 266 (288)
|++|+..
T Consensus 286 v~lw~~~ 292 (316)
T 3bg1_A 286 VTLWKES 292 (316)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999986
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.1e-35 Score=247.58 Aligned_cols=218 Identities=14% Similarity=0.166 Sum_probs=192.6
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe------eeEeeccccCcEEEEEEecC----C---CE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD------WASEIQGHKDSVSSLAFSMD----G---QL 121 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~i~~~~~~~~----~---~~ 121 (288)
.....+.+|.++|++++|+| .+|++|+.||.|++|++.+++ .+..+..|..+|++++|+|+ + ++
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 34567889999999999998 699999999999999999887 78888899999999999999 9 99
Q ss_pred EEEEeCCCeEEEEeCCCCce-----eEEeccC-----CCCEEEEEEc----CCCCE-EEEecCCCeEEEEECCc------
Q 023018 122 LASGGLDGLVQIWDPSSGNL-----KCTLEGP-----GGGVEWVSWH----PRGHI-VLAGSEDSTVWMWNADR------ 180 (288)
Q Consensus 122 l~~~~~dg~i~i~d~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~dg~i~i~d~~~------ 180 (288)
|++++.||.|++|++.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+++
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999998887 7888888 4889999999 99999 99999999999999988
Q ss_pred ccEEE-----Eee-------ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCcc---ccCeEEEEEc
Q 023018 181 AAYLN-----MFS-------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYH---TEGLTCLTIS 245 (288)
Q Consensus 181 ~~~~~-----~~~-------~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~v~~~~~~ 245 (288)
++.+. .+. .|...|.+++|+|++ +|++++.||.|++||+++++.+..+.....| ...|.+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 66655 663 478899999999999 9999999999999999999888888752224 7889999999
Q ss_pred CCCCEEEEEeCC---CcEEEEEcCCCcEEEEecc
Q 023018 246 ADSTLALSGSKD---GSVHMVNITTGKVCCLNFQ 276 (288)
Q Consensus 246 ~~~~~l~~~~~d---g~i~iwd~~t~~~~~~~~~ 276 (288)
|++.+|++++.| |.|++||+.+++++..+..
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 999999999999 9999999999999887754
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=252.23 Aligned_cols=222 Identities=12% Similarity=0.167 Sum_probs=189.1
Q ss_pred CCCCCCeeEe-ecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC---Ce---eeEeeccccCcEEEEEEecCCCEEE
Q 023018 51 EQPDDSTHIF-SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ---GD---WASEIQGHKDSVSSLAFSMDGQLLA 123 (288)
Q Consensus 51 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~---~~---~~~~~~~~~~~i~~~~~~~~~~~l~ 123 (288)
....+.+..+ .+|.++|++++|+|.++.+|++|+.||.|++|++.+ +. ....+ .|...|++++|+|++++|+
T Consensus 49 ~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 49 NLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp GCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEE
T ss_pred cccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEE
Confidence 4567788888 899999999999995677999999999999999976 33 23333 4899999999999999999
Q ss_pred EEeCCCeEEEEeCC---CCceeEEecc------------CCCCEEEEE--EcCCCCEEEEecCCCeEEEEECCcccEEEE
Q 023018 124 SGGLDGLVQIWDPS---SGNLKCTLEG------------PGGGVEWVS--WHPRGHIVLAGSEDSTVWMWNADRAAYLNM 186 (288)
Q Consensus 124 ~~~~dg~i~i~d~~---~~~~~~~~~~------------~~~~i~~~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 186 (288)
+|+.||.|++||+. +++....+.. +...+.++. +++++.+|++++.||.|++||+++++++..
T Consensus 128 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp EEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 99999999999994 5544443321 445566666 557899999999999999999999999999
Q ss_pred eec--cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC----CCCEEEEEeCCCcE
Q 023018 187 FSG--HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA----DSTLALSGSKDGSV 260 (288)
Q Consensus 187 ~~~--~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i 260 (288)
+.. |...|++++|+|++.+|++|+.||.|++||+++++.+..+... +..+|.+++|+| ++.+|++|+.||.|
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG--DHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT--TCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC--CCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 988 8899999999999999999999999999999999888877522 567899996665 67799999999999
Q ss_pred EEEEcCCCcEEEEec
Q 023018 261 HMVNITTGKVCCLNF 275 (288)
Q Consensus 261 ~iwd~~t~~~~~~~~ 275 (288)
++||+.+++++..+.
T Consensus 286 ~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 286 TIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEEcCCCcEEEEEE
Confidence 999999999888774
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.1e-34 Score=273.28 Aligned_cols=231 Identities=25% Similarity=0.366 Sum_probs=209.1
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
......+.+|.+.|++++|+| ++.++++|+.||.|++|++.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 605 ~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 605 NLSRLVVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp CCCSEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ccceEEEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 445567899999999999999 8889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcC--CCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHP--RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
||+.+++.+..+..|...|.+++|+| ++.++++|+.||.|++||+++++.+..+.+|...|++++|+|++++|++++.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 5568999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCceeEEEcCC----------------------------------------------------CccccCe
Q 023018 212 DATLRVWNPKSGENIHVIRGH----------------------------------------------------PYHTEGL 239 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~----------------------------------------------------~~~~~~v 239 (288)
||.|++||+.++.....+... ..|...+
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 999999999877554433210 1356788
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 240 TCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 240 ~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
.+++|+|++.++++++.+|.|++|++.+++.+..+ ..+.+++|+|+
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCC
Confidence 99999999999999999999999999999998887 34677777765
No 60
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.1e-34 Score=242.14 Aligned_cols=201 Identities=17% Similarity=0.147 Sum_probs=169.7
Q ss_pred CCCCEEEEEEcCCCCcEEE--EEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc
Q 023018 63 HSDEVYSVACSPTDATLVA--TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~--~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (288)
+...+.+++|+| ++++++ +++.|++|+|||+.+++.+..+. |...|.+++|+|++++|++++.++ +++|+..+++
T Consensus 132 ~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 132 ADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp TTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred cccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 445689999999 666654 45578999999999999988886 778899999999999999998554 6666666666
Q ss_pred eeEE--eccCCCCEEEEEEcCCCCEEEEecCCC----eEEEEECCcccE----EEEeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 141 LKCT--LEGPGGGVEWVSWHPRGHIVLAGSEDS----TVWMWNADRAAY----LNMFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 141 ~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
.... ...|...+.+++|+|+++.+++++.++ .+++|++..... ...+..|..+|++++|+|+|++|++|+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 5433 345777899999999999999998877 688899876542 355678899999999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
.|+.|+|||+++++++..+... |..+|++++|+|+|++|++|+.|++|+||++...
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~g--H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQA--HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETTS--SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEECCCCcEEEEecCc--ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999988876322 8899999999999999999999999999999754
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-34 Score=241.38 Aligned_cols=224 Identities=20% Similarity=0.305 Sum_probs=197.2
Q ss_pred CCeeEeec-CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 55 DSTHIFSG-HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 55 ~~~~~~~~-h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
.....+.. |...|++++|+| ++.+|++|+.||.|++|++.+++.+..+.+|...|.+++|+ +.+|++|+.||.|++
T Consensus 124 ~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i 200 (401)
T 4aez_A 124 SVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHH 200 (401)
T ss_dssp CEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred cEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEE
Confidence 34444444 889999999999 88899999999999999999999999999999999999994 569999999999999
Q ss_pred EeCC-CCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCC-EEEEEe-
Q 023018 134 WDPS-SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-TICTGS- 210 (288)
Q Consensus 134 ~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~~~- 210 (288)
||+. .......+..|.+.|.+++|+|++++|++|+.||.|++||+++++++..+..|...|.+++|+|++. ++++++
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC
Confidence 9998 5567778889999999999999999999999999999999999999999999999999999999664 556654
Q ss_pred -CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCcEEEEe------cceEEEE
Q 023018 211 -DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG--SKDGSVHMVNITTGKVCCLN------FQYTCVA 281 (288)
Q Consensus 211 -~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~iwd~~t~~~~~~~------~~~~~~~ 281 (288)
.|+.|++||+.+++.+..+. +...+.+++|+|++.+|+++ +.||.|++|++.+++..... ..+.+++
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~ 356 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVD----AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSA 356 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEE
T ss_pred CCCCEEEEEECCCCCEEEEEe----CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEE
Confidence 69999999999999888886 56789999999999999984 48999999999997766543 4567778
Q ss_pred Eeec
Q 023018 282 YDLD 285 (288)
Q Consensus 282 ~~~d 285 (288)
|+|+
T Consensus 357 ~s~d 360 (401)
T 4aez_A 357 LSPD 360 (401)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8775
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=235.23 Aligned_cols=228 Identities=15% Similarity=0.212 Sum_probs=205.0
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCC---
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD--- 128 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--- 128 (288)
...+.+..+.+|...|++++|+| ++.+|++++.||.|++|++.+++.+..+. +...+.+++|+|++++|++++.+
T Consensus 62 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~ 139 (369)
T 3zwl_B 62 LNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMK 139 (369)
T ss_dssp TTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTT
T ss_pred CCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccC
Confidence 34577888999999999999999 78899999999999999999999988888 88999999999999999999998
Q ss_pred --CeEEEEeCCCCc-----------eeEEeccCCC--CEEEEEEcCCCCEEEEecCCCeEEEEECCc-ccEEEEeeccCC
Q 023018 129 --GLVQIWDPSSGN-----------LKCTLEGPGG--GVEWVSWHPRGHIVLAGSEDSTVWMWNADR-AAYLNMFSGHGS 192 (288)
Q Consensus 129 --g~i~i~d~~~~~-----------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~ 192 (288)
|.|++|++.... ....+..+.. .+.+++|+|++++|++++.+|.|++||+++ .+.+..+..|..
T Consensus 140 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 219 (369)
T 3zwl_B 140 NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK 219 (369)
T ss_dssp BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS
T ss_pred CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC
Confidence 999999987653 2334444555 899999999999999999999999999998 788888999999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC--------------
Q 023018 193 SVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-------------- 258 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------- 258 (288)
.|.+++|+|++++|++++.||.|++||+++++.+..+. +...+..++|+|++.++++++.++
T Consensus 220 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 220 SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 99999999999999999999999999999999888887 567899999999999999999988
Q ss_pred cEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 259 SVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 259 ~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
.+++||+.+++.+..+ ..+.+++|+|+
T Consensus 296 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 296 EARFYHKIFEEEIGRVQGHFGPLNTVAISPQ 326 (369)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred eeEEEecCCCcchhheecccCcEEEEEECCC
Confidence 8999999999999887 45677788775
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=265.70 Aligned_cols=211 Identities=13% Similarity=0.105 Sum_probs=186.6
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCC
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (288)
....+|...|++++|+| ++.+||+|+.||.|+||+..+.+....+. |..+|.+++|+| +++|++++.|++|++||+.
T Consensus 11 ~~~~gh~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEECSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccccCCCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 34468999999999999 78899999999999999998877766654 788999999999 8899999999999999999
Q ss_pred CCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEE-----------EEeeccCCCeEEEEEcCC-CCE
Q 023018 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL-----------NMFSGHGSSVTCGDFTPD-GKT 205 (288)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~i~~~~~~p~-~~~ 205 (288)
+++.+..+. +...|++++|+|++++|++|+.||.|++||+++++.. ..+.+|..+|++++|+|+ +..
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 999888886 6678999999999999999999999999999987653 234568899999999995 578
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCC---------------CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 206 ICTGSDDATLRVWNPKSGENIHVIRGH---------------PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
|++|+.||.| +||+++++.+..+..+ ..|...|.+++|+|+|.+|++++.||.|++||++++++
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999 9999999888887653 12356799999999999999999999999999999998
Q ss_pred EEE
Q 023018 271 CCL 273 (288)
Q Consensus 271 ~~~ 273 (288)
+..
T Consensus 246 ~~~ 248 (902)
T 2oaj_A 246 IMA 248 (902)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.7e-34 Score=244.93 Aligned_cols=225 Identities=21% Similarity=0.369 Sum_probs=199.0
Q ss_pred CCCeeEeecCCCCE-EEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 54 DDSTHIFSGHSDEV-YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 54 ~~~~~~~~~h~~~v-~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
......+.+|...| .++.+. +.+|++|+.||.|++||+.+++.+..+.+|...|++++|+|++ +|++|+.||+|+
T Consensus 111 ~~~~~~l~~h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 111 VPQRTTLRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp CCEEEEEECCSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred CcceEEEcCCCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 34567899999884 777774 4599999999999999999999999999999999999999987 999999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEc--CCCCEEEEecCCCeEEEEECCcccE-----------------------EEEe
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWH--PRGHIVLAGSEDSTVWMWNADRAAY-----------------------LNMF 187 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~-----------------------~~~~ 187 (288)
+||+.+++.+..+.+|...|.+++|+ +++.++++|+.||.|++||++++.. +..+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999998 5778999999999999999987642 4566
Q ss_pred eccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 188 SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 188 ~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
.+|...+.++ ++++++|++++.||.|++||+++++.+..+.. |...|.+++|+|++.+|++|+.||.|++||+.+
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---HTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 7788888876 56789999999999999999999999888876 778999999999999999999999999999999
Q ss_pred CcEEEEec----ceEEEEEeeccc
Q 023018 268 GKVCCLNF----QYTCVAYDLDFV 287 (288)
Q Consensus 268 ~~~~~~~~----~~~~~~~~~df~ 287 (288)
++++..+. .+.++.|++.++
T Consensus 342 ~~~~~~~~~h~~~v~~~~~~~~~l 365 (464)
T 3v7d_B 342 GELMYTLQGHTALVGLLRLSDKFL 365 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECSSEE
T ss_pred CcEEEEEeCCCCcEEEEEEcCCEE
Confidence 99998883 456666665543
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-34 Score=239.87 Aligned_cols=219 Identities=19% Similarity=0.277 Sum_probs=189.1
Q ss_pred CCCeeEeecCCCCEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEecC--CCEEEEEeCC
Q 023018 54 DDSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLD 128 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d 128 (288)
......+.+|..+|++++|+|. ++.+|++|+.||.|++|++.+++ .+..+..|...|.+++|+|+ +.+|++++.|
T Consensus 45 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 45 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 4566788999999999999973 27899999999999999999987 67778889999999999999 8999999999
Q ss_pred CeEEEEeCCCCc--eeEEeccCCCCEEEEEEcC-------------CCCEEEEecCCCeEEEEECCccc----EEEEeec
Q 023018 129 GLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHP-------------RGHIVLAGSEDSTVWMWNADRAA----YLNMFSG 189 (288)
Q Consensus 129 g~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~ 189 (288)
|.|++||+..+. ....+..|...|.+++|+| ++.+|++++.||.|++||++++. .+..+..
T Consensus 125 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 999999998873 4445677889999999999 68999999999999999998653 4567778
Q ss_pred cCCCeEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 190 HGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 190 ~~~~i~~~~~~p~---~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
|...|.+++|+|+ +.+|++++.||.|++||++++.. ...+.....+...|.+++|+|++.+|++++.||.|++|+
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 9999999999999 89999999999999999987642 223333334778899999999999999999999999999
Q ss_pred cCCCcEEE
Q 023018 265 ITTGKVCC 272 (288)
Q Consensus 265 ~~t~~~~~ 272 (288)
+.++....
T Consensus 285 ~~~~~~~~ 292 (379)
T 3jrp_A 285 ENLEGKWE 292 (379)
T ss_dssp EEETTEEE
T ss_pred CCCCCccc
Confidence 98654433
No 66
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.8e-35 Score=245.96 Aligned_cols=212 Identities=19% Similarity=0.360 Sum_probs=185.8
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee---ccccCcEEEEEEecCCCEEEEEeCCC
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI---QGHKDSVSSLAFSMDGQLLASGGLDG 129 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg 129 (288)
..+.+..+.+|..+|++++|+|.++.+|++|+.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||
T Consensus 104 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 104 TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC
Confidence 356788899999999999999977889999999999999999999988888 67999999999999999999999999
Q ss_pred eEEEEeCCCCceeEEec----------------------------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc
Q 023018 130 LVQIWDPSSGNLKCTLE----------------------------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA 181 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~----------------------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 181 (288)
.|++||+.+++....+. .|...|.+++|+ +++|++++.||.|++||++++
T Consensus 184 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESST
T ss_pred CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCc
Confidence 99999998876544333 388899999998 779999999999999999876
Q ss_pred cE--------------EEEeeccCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCcee----EEEcCCCccccCeEE
Q 023018 182 AY--------------LNMFSGHGSSVTCGDFTPD--GKTICTGSDDATLRVWNPKSGENI----HVIRGHPYHTEGLTC 241 (288)
Q Consensus 182 ~~--------------~~~~~~~~~~i~~~~~~p~--~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~ 241 (288)
.. +..+..|...|++++|+|+ +++|++++.||.|++||+.+++.. ..+..+. +...|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~ 340 (366)
T 3k26_A 262 EDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHK-CGAAIRQ 340 (366)
T ss_dssp TCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTT-CCSCEEE
T ss_pred cccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccc-cCCceEE
Confidence 43 7778889999999999999 999999999999999999987543 3555421 3789999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 242 LTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 242 ~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
++|+|++++|++++.||.|++||+.+
T Consensus 341 ~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 341 TSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999999999999999999864
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=229.88 Aligned_cols=223 Identities=22% Similarity=0.326 Sum_probs=197.4
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeE
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (288)
.+.+..+.+.+|.++|++++| | ++.+|++|+.||.|++|++.+++....+..|...|.+++|+|++++|++++.||.|
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ccHHHHHHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 345678899999999999999 7 77789999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCC---ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcC-CCCEEE
Q 023018 132 QIWDPSSG---NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP-DGKTIC 207 (288)
Q Consensus 132 ~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~ 207 (288)
++|++... +....+..|...|.+++| +++++++++.||.|++|| .++.+..+..|..++.+++|.| ++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 99998654 556778889999999999 577999999999999999 6677888889999999999998 899999
Q ss_pred EEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEe
Q 023018 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYD 283 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~ 283 (288)
+++.||.|++||. ......+... +...+.+++|+|++. |++++.||.|++||+++++++..+ ..+.+++|+
T Consensus 160 ~~~~d~~i~i~d~--~~~~~~~~~~--~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 234 (313)
T 3odt_A 160 TASADKTIKLWQN--DKVIKTFSGI--HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL 234 (313)
T ss_dssp EEETTSCEEEEET--TEEEEEECSS--CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEECCCCEEEEec--CceEEEEecc--CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe
Confidence 9999999999993 4555566543 678899999999988 889999999999999999999887 456777777
Q ss_pred ec
Q 023018 284 LD 285 (288)
Q Consensus 284 ~d 285 (288)
|+
T Consensus 235 ~~ 236 (313)
T 3odt_A 235 PN 236 (313)
T ss_dssp TT
T ss_pred cC
Confidence 76
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-34 Score=263.31 Aligned_cols=228 Identities=21% Similarity=0.304 Sum_probs=209.3
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
...+..+.+|..+|++++|+| ++.+|++|+.||.|++|++.+++.+..+.+|...|++++|+|++++|++++.||.|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred CceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 557788899999999999999 7889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCC-ceeEEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEeeccC-CCeEEEEEcC--CCCEEEE
Q 023018 134 WDPSSG-NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-SSVTCGDFTP--DGKTICT 208 (288)
Q Consensus 134 ~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~p--~~~~l~~ 208 (288)
|++.++ .....+..|...|.+++|+| ++..|++++.||.|++||++++.....+..+. ..+.+++|+| ++.+|++
T Consensus 124 w~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 203 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT 203 (814)
T ss_dssp EEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEE
T ss_pred EECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEE
Confidence 999887 66777888999999999999 88899999999999999999887777776554 8899999999 9999999
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEee
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDL 284 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~ 284 (288)
++.+|.|++||+.+++.+..+.. |...|.+++|+|++.+|++++.||.|++||+.+++.+..+ ..+.+++|+|
T Consensus 204 ~~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 204 ASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp ECTTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EeCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 99999999999999998888876 7788999999999999999999999999999999998887 4567777777
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 281 ~ 281 (814)
T 3mkq_A 281 T 281 (814)
T ss_dssp T
T ss_pred C
Confidence 6
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.8e-35 Score=242.85 Aligned_cols=218 Identities=17% Similarity=0.289 Sum_probs=190.9
Q ss_pred CCCCEEEEEEcCCC---CcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEec-CCCEEEEEeCCCeEEEEeCCC
Q 023018 63 HSDEVYSVACSPTD---ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSS 138 (288)
Q Consensus 63 h~~~v~~~~~~~~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~ 138 (288)
|...|++++|+|.. +.+|++|+.||.|++|++.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 66889999999932 57999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CceeEEe---ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeec--------------------------
Q 023018 139 GNLKCTL---EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG-------------------------- 189 (288)
Q Consensus 139 ~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------------------- 189 (288)
++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9988888 67899999999999999999999999999999998765444333
Q ss_pred --cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------------eEEEcCCCccccCeEEEEEcCC--CCEE
Q 023018 190 --HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN--------------IHVIRGHPYHTEGLTCLTISAD--STLA 251 (288)
Q Consensus 190 --~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~--------------~~~~~~~~~~~~~v~~~~~~~~--~~~l 251 (288)
|...|.+++|+ +++|++++.||.|++||+.++.. +..+.. |...|.+++|+|+ +.+|
T Consensus 228 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY---SQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC---SSCCSSCCCCEECTTSSEE
T ss_pred cCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccc---cCCcEEEEEEcCCCCCcEE
Confidence 88999999998 77999999999999999987643 445544 6778999999999 9999
Q ss_pred EEEeCCCcEEEEEcCCCcE----EEEe------cceEEEEEeec
Q 023018 252 LSGSKDGSVHMVNITTGKV----CCLN------FQYTCVAYDLD 285 (288)
Q Consensus 252 ~~~~~dg~i~iwd~~t~~~----~~~~------~~~~~~~~~~d 285 (288)
++|+.||.|++||+.++++ +..+ ..+.+++|+|+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 346 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD 346 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCC
Confidence 9999999999999999853 2233 45778888775
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.3e-35 Score=249.86 Aligned_cols=212 Identities=13% Similarity=0.202 Sum_probs=179.0
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-----------eeEeecccc------------CcEEEEEEecCC
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----------WASEIQGHK------------DSVSSLAFSMDG 119 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~------------~~i~~~~~~~~~ 119 (288)
|.+.|++++|+| ++.+||+|+.||.|+||++.+++ ....+.+|. ..|++++|+|++
T Consensus 27 ~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 568999999999 88899999999999999999876 477888898 889999999998
Q ss_pred --CEEEEEeCCCeEEEEeCCCCcee---------------------------------------EE-eccCCCCEEEEEE
Q 023018 120 --QLLASGGLDGLVQIWDPSSGNLK---------------------------------------CT-LEGPGGGVEWVSW 157 (288)
Q Consensus 120 --~~l~~~~~dg~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~i~~~~~ 157 (288)
.+|++++.||.|++|++.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764331 12 3578899999999
Q ss_pred cCCCCEEEEecCCCeEEEEECCc-ccEEE-------EeeccCCCeEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCce---
Q 023018 158 HPRGHIVLAGSEDSTVWMWNADR-AAYLN-------MFSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNPKSGEN--- 225 (288)
Q Consensus 158 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~-------~~~~~~~~i~~~~~~p~~-~~l~~~~~dg~i~i~d~~~~~~--- 225 (288)
+|++++|++| .||.|++||+++ ++.+. .+..|...|++++|+|++ .+|++|+.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999999 799999999984 44444 255789999999999998 9999999999999999998876
Q ss_pred -eEEEcCCCc---------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CcEEEEecce
Q 023018 226 -IHVIRGHPY---------HTEGLTCLTISADSTLALSGSKDGSVHMVNITT-GKVCCLNFQY 277 (288)
Q Consensus 226 -~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t-~~~~~~~~~~ 277 (288)
...+..+.. |...|.+++|+|++++|++++. |.|++||+++ ++++..+..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESC
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecc
Confidence 677766311 1138999999999999999998 9999999997 8877766444
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=243.16 Aligned_cols=228 Identities=15% Similarity=0.256 Sum_probs=206.9
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCc---------------EEEEEEe
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS---------------VSSLAFS 116 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------------i~~~~~~ 116 (288)
........+.+|..+|++++|+| ++.+|++++.||.|++|++.+++.+..+..+... +.+++|+
T Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (425)
T 1r5m_A 137 KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWV 215 (425)
T ss_dssp TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEE
T ss_pred CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEc
Confidence 44567888899999999999999 7889999999999999999999999888877766 8999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEE
Q 023018 117 MDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTC 196 (288)
Q Consensus 117 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 196 (288)
|++ .+++++.+|.|++||+.+++.+..+..|...|.+++|+|++++|++++.+|.|++||+++++.+..+..|...|.+
T Consensus 216 ~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 216 DDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp ETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEE
T ss_pred CCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEE
Confidence 975 6889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-------
Q 023018 197 GDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK------- 269 (288)
Q Consensus 197 ~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~------- 269 (288)
++|+|++ +|++++.||.|++||+++++.+..+.. +...+.+++|+|++.+|++++.||.|++|++.+++
T Consensus 295 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 370 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV---DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLY 370 (425)
T ss_dssp EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC---TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------
T ss_pred EEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc---CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeee
Confidence 9999998 999999999999999999998888876 67899999999999999999999999999999988
Q ss_pred -------------EEEEec------ceEEEEEeec
Q 023018 270 -------------VCCLNF------QYTCVAYDLD 285 (288)
Q Consensus 270 -------------~~~~~~------~~~~~~~~~d 285 (288)
++..+. .+.+++|+|+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 371 GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp --------CEECCEEEEECCTTCCCCEEEEEECTT
T ss_pred cccccccCcccchhhhhhcCcccCCceEEEEccCC
Confidence 777762 6778888776
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=241.84 Aligned_cols=229 Identities=16% Similarity=0.235 Sum_probs=192.9
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeC---CCeEEEEEccCCeeeEee-ccccCcEEEEEEecC---CCEEEEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGG---DDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMD---GQLLASG 125 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~l~~~ 125 (288)
+....+.+.+|..+|++++|+|.+..++++|+. ||.|++|++.+++..... ..|..+|.+++|+|+ +.+|++|
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 344556778999999999999966577778876 999999999988765443 368999999999998 6899999
Q ss_pred eCCCeEEEEeCCCCc-eeEEeccCCCCEEEEEE------cCCCCEEEEecCCCeEEEEECCccc-EEEEeeccCC----C
Q 023018 126 GLDGLVQIWDPSSGN-LKCTLEGPGGGVEWVSW------HPRGHIVLAGSEDSTVWMWNADRAA-YLNMFSGHGS----S 193 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~----~ 193 (288)
+.||.|++||+.+++ .+..+..|...|.+++| +|++++|++++.||.|++||++++. ++..+..+.. .
T Consensus 87 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred cCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 999999999999988 88889999999999955 6789999999999999999999886 6777765554 7
Q ss_pred eEEEE----EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC---CCCEEEEEeCCCcEEEEEcC
Q 023018 194 VTCGD----FTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA---DSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 194 i~~~~----~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~ 266 (288)
+.+++ |+|++++|++++.+|.|++||+++++...... +...|.+++|+| ++.+|++++.||.|++||++
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 88988 78899999999999999999999988755543 678899999999 89999999999999999998
Q ss_pred CCcEEEEe---------cceEEEEEeec
Q 023018 267 TGKVCCLN---------FQYTCVAYDLD 285 (288)
Q Consensus 267 t~~~~~~~---------~~~~~~~~~~d 285 (288)
+++.+..+ ..+.+++|+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETT
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCC
Confidence 86544322 46778888875
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-35 Score=246.94 Aligned_cols=220 Identities=16% Similarity=0.296 Sum_probs=194.3
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC----CeeeEeeccccCcEEEEEEecC-CCEEEEEeCCCeEEEEeC
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMD-GQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~ 136 (288)
.|...|++++|+| ++.+|++|+.||.|++|++.+ .+.+..+.+|...|++++|+|+ +.+|++++.||.|++||+
T Consensus 65 ~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 65 QVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred ecCCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 5889999999999 788999999999999999987 4578888899999999999998 889999999999999999
Q ss_pred CCCc------eeEE---eccCCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEeecc------CCCeEEEEEc
Q 023018 137 SSGN------LKCT---LEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGH------GSSVTCGDFT 200 (288)
Q Consensus 137 ~~~~------~~~~---~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~ 200 (288)
.+++ .... +..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+..+ ...+.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 9876 3322 3568889999999998 789999999999999999999988888876 7899999999
Q ss_pred CCC-CEEEEEeCCC---eEEEEeCCCC-ceeEEEc-CCCccccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEE
Q 023018 201 PDG-KTICTGSDDA---TLRVWNPKSG-ENIHVIR-GHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVCCL 273 (288)
Q Consensus 201 p~~-~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~t~~~~~~ 273 (288)
|++ .+|++++.++ .|++||++++ .....+. . |...|.+++|+| ++.+|++++.||.|++||+.+++++..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 300 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG---HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ 300 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC---CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC---ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcccee
Confidence 987 6899999998 9999999986 4455554 4 778999999999 999999999999999999999999988
Q ss_pred e----cceEEEEEeec
Q 023018 274 N----FQYTCVAYDLD 285 (288)
Q Consensus 274 ~----~~~~~~~~~~d 285 (288)
+ ..+.+++|+|+
T Consensus 301 ~~~~~~~v~~~~~s~~ 316 (416)
T 2pm9_A 301 FPARGNWCFKTKFAPE 316 (416)
T ss_dssp EECSSSCCCCEEECTT
T ss_pred ecCCCCceEEEEECCC
Confidence 7 34677888875
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-33 Score=241.45 Aligned_cols=224 Identities=22% Similarity=0.380 Sum_probs=198.6
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEe--cCCCEEEEEeCCCe
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFS--MDGQLLASGGLDGL 130 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~ 130 (288)
..+.+..+.+|.++|++++|+| ++ ++++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++.+|++|+.||.
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred CCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 3567788899999999999998 55 89999999999999999999999999999999999998 46789999999999
Q ss_pred EEEEeCCCCce-----------------------eEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEe
Q 023018 131 VQIWDPSSGNL-----------------------KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (288)
Q Consensus 131 i~i~d~~~~~~-----------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 187 (288)
|++||+.++.. ...+.+|...+.++ +++++++++++.||.|++||+++++++..+
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 306 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 99999987653 44566788888877 567889999999999999999999999999
Q ss_pred eccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 188 SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 188 ~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+.. |...|.++.|+ +.+|++++.||.|++||+.+
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG---HTALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC---CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999999999999999999999988877 78899999997 57999999999999999999
Q ss_pred CcEEEEe---cceEEEEEeec
Q 023018 268 GKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 268 ~~~~~~~---~~~~~~~~~~d 285 (288)
++..... .....++|+++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 382 YSRKFSYHHTNLSAITTFYVS 402 (464)
T ss_dssp CCEEEEEECTTCCCEEEEEEC
T ss_pred CceeeeecCCCCccEEEEEeC
Confidence 8877665 33455566654
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.4e-34 Score=237.29 Aligned_cols=207 Identities=19% Similarity=0.258 Sum_probs=186.9
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEe--eccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
....+.+|...|++++|+| ++.+|++++.||.|++|++.+++.... +..|...|.+++|+|++++|++++.+|.|++
T Consensus 44 ~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 122 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 122 (372)
T ss_dssp EEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE
T ss_pred eeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEE
Confidence 6788899999999999999 788999999999999999998875444 3568999999999999999999999999999
Q ss_pred EeCCCCce---eEE-eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECC------------------cccEEEEeeccC
Q 023018 134 WDPSSGNL---KCT-LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD------------------RAAYLNMFSGHG 191 (288)
Q Consensus 134 ~d~~~~~~---~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~ 191 (288)
||+..+.. ... ...|...|.+++|+|++++|++++.||.|++||++ .++.+..+..|.
T Consensus 123 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 123 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred EEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 99988763 233 35678899999999999999999999999999953 678888888999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 192 ~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
..|.+++|+|++++|++++.||.|++||+++++.+..+.. +..+|.+++|+|++.+|+++ .||.|++|++.+
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS---ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC---SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc---CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999999999999999999999999999888876 67789999999999988877 899999999988
No 76
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=249.58 Aligned_cols=213 Identities=22% Similarity=0.388 Sum_probs=192.2
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe------eeEe---eccccCcEEEEEEecC-CCEEEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD------WASE---IQGHKDSVSSLAFSMD-GQLLAS 124 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~---~~~~~~~i~~~~~~~~-~~~l~~ 124 (288)
.....+.+|...|++++|+|.++.+|++++.||.|++|++.+++ .... +..|...|.+++|+|+ +.+|++
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEE
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEE
Confidence 47888899999999999999548899999999999999999876 3333 3578999999999998 789999
Q ss_pred EeCCCeEEEEeCCCCceeEEeccC------CCCEEEEEEcCCC-CEEEEecCCC---eEEEEECCcc-cEEEEee-ccCC
Q 023018 125 GGLDGLVQIWDPSSGNLKCTLEGP------GGGVEWVSWHPRG-HIVLAGSEDS---TVWMWNADRA-AYLNMFS-GHGS 192 (288)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~ 192 (288)
++.||.|++||+.+++.+..+..+ ...+.+++|+|++ .++++++.++ .|++||++++ .++..+. +|..
T Consensus 184 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~ 263 (416)
T 2pm9_A 184 AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQK 263 (416)
T ss_dssp ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS
T ss_pred EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccC
Confidence 999999999999999988888776 7889999999987 6999999998 9999999986 6777787 8999
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcE
Q 023018 193 SVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 193 ~i~~~~~~p-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
.|++++|+| ++.+|++++.||.|++||+++++.+..+.. |...|.+++|+|++ .+|++++.||.|++|++.+++.
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA---RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC---SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC---CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 999999999 999999999999999999999999888886 67889999999998 8999999999999999988764
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=254.74 Aligned_cols=207 Identities=13% Similarity=0.120 Sum_probs=180.2
Q ss_pred eEeecCCCCEEEEEEcCC-----CCcEEEEEeCCCeEEEEEccCCee-----------eEeeccccCcEEEEEEecCCCE
Q 023018 58 HIFSGHSDEVYSVACSPT-----DATLVATGGGDDKGFFWRINQGDW-----------ASEIQGHKDSVSSLAFSMDGQL 121 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~ 121 (288)
..+.+|.+.|.+++|+|. ++.+||+++.||+|++|++.++.. ...+.+|...|++++|++++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 456788899999999994 257999999999999999986532 23677899999999999864 8
Q ss_pred EEEEeCCCeEEEEeCCCCc-eeEEeccCCCCEEEE--EEcCCC-CEEEEecCCCeEEEEECCcccEEEEeeccCC--CeE
Q 023018 122 LASGGLDGLVQIWDPSSGN-LKCTLEGPGGGVEWV--SWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFSGHGS--SVT 195 (288)
Q Consensus 122 l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~ 195 (288)
|++|+.||+|++||+.++. ....+..|...|.++ +|+|++ .+|++|+.|++|++||+++++++..+.+|.. .|.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 9999999999999999764 455688899999999 567887 8999999999999999999887777766653 578
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
+++|+|+++.|++++.|++|++||++++..+..+.+ |...|++++|+|++.+|++|+.||+|++|++..+
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g---H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS---RETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE---CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec---CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 999999999999999999999999999988777776 7889999999999999999999999999998653
No 78
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-34 Score=244.04 Aligned_cols=227 Identities=9% Similarity=0.055 Sum_probs=193.1
Q ss_pred eEeecCCCCEEEEEEcCCCCcE-EEEEeCCCeEEEEEcc--CCeeeEeec--cccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 58 HIFSGHSDEVYSVACSPTDATL-VATGGGDDKGFFWRIN--QGDWASEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~-l~~~~~dg~i~iw~~~--~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
....+|.+.|++++|+| ++.+ +++|+.||.|++|++. +++.+..+. .|...|++++|+|++++|++|+.+|.|+
T Consensus 96 ~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVY 174 (450)
T ss_dssp ----CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEE
Confidence 44567888999999999 5555 5899999999999999 888887776 4678999999999999999999999999
Q ss_pred EEeCCCCceeE----EeccCCCCEEEEEEcCC---CCEEEEecCCCeEEEEECCcccEEEE-eeccCCCeEEEEEcCCCC
Q 023018 133 IWDPSSGNLKC----TLEGPGGGVEWVSWHPR---GHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 133 i~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~p~~~ 204 (288)
+|++.+++... .+.+|...|.+++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|...|++++|+ +++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence 99998876544 67778899999999999 99999999999999999999988877 55899999999999 999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEcCCC----------------------ccccCeEEEEEcCCCCEEEEEe-CCCcEE
Q 023018 205 TICTGSDDATLRVWNPKSGENIHVIRGHP----------------------YHTEGLTCLTISADSTLALSGS-KDGSVH 261 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~ 261 (288)
+|++++.|+.|++||+++++.+..+.... .....|..++|+|++++|++++ .++.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 99999999999999999999888775321 1345789999999999999998 899999
Q ss_pred EEEc--CCC---cEEEEe---cceEEEEEeecc
Q 023018 262 MVNI--TTG---KVCCLN---FQYTCVAYDLDF 286 (288)
Q Consensus 262 iwd~--~t~---~~~~~~---~~~~~~~~~~df 286 (288)
+|++ .++ +.+..+ ..+.+++|+|+-
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~ 366 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFPYNVISLSAHNDE 366 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECSSCEEEEEEETTE
T ss_pred EEEeccCCCCceeeccEeccCCceEEEEecCCc
Confidence 9999 666 555554 467788887753
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-35 Score=264.08 Aligned_cols=225 Identities=19% Similarity=0.288 Sum_probs=190.9
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEcc--CCeeeEeeccccCcEEEEEEecC--CCEEEEEeCCCeEE
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGLVQ 132 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~ 132 (288)
..++.+|.++|++++|+| ++.+|++|+.||.|++|++. +++.+..+.+|..+|++++|+|+ +++|++|+.||.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 457899999999999999 77899999999999999998 45677788899999999999987 89999999999999
Q ss_pred EEeCCCCc--eeEEeccCCCCEEEEEEcCC--CCEEEEecCCCeEEEEECCcc--cEEEEeeccCCCeEEEEEcC-----
Q 023018 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRA--AYLNMFSGHGSSVTCGDFTP----- 201 (288)
Q Consensus 133 i~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~p----- 201 (288)
+||+.+++ ....+..|...|.+++|+|+ ++.+++|+.||.|++||++++ .....+..|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999886 66777889999999999998 999999999999999999887 34456678999999999999
Q ss_pred --------CCCEEEEEeCCCeEEEEeCCCCc----eeEEEcCCCccccCeEEEEEcCC---CCEEEEEeCCCcEEEEEcC
Q 023018 202 --------DGKTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 202 --------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~ 266 (288)
++.+|++|+.||.|++||++++. ....+.. |..+|.+++|+|+ +.+|++++.||.|++||+.
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~---h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC---CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 58999999999999999998773 3344444 7889999999999 8999999999999999999
Q ss_pred CCcE-----EEEe----cceEEEEEeec
Q 023018 267 TGKV-----CCLN----FQYTCVAYDLD 285 (288)
Q Consensus 267 t~~~-----~~~~----~~~~~~~~~~d 285 (288)
+++. +... ..+.+++|+|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spd 265 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLS 265 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTT
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCC
Confidence 8742 1111 45667777775
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-35 Score=246.42 Aligned_cols=206 Identities=16% Similarity=0.263 Sum_probs=173.4
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe---eeEeeccccCcEEEEEEecCCCEEEEEeCCCeE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (288)
.....+.+|..+|++++|+| ++.+|++++.||.|++|++.+++ ....+..|...|.+++|+|++++|++++.|+.|
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVI 124 (377)
T ss_dssp EECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCE
T ss_pred EEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeE
Confidence 56677889999999999999 77899999999999999999876 667778899999999999999999999999999
Q ss_pred EEEeCCCCc---eeEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECC------------------cccEEEEeec
Q 023018 132 QIWDPSSGN---LKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD------------------RAAYLNMFSG 189 (288)
Q Consensus 132 ~i~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~ 189 (288)
++||+.+++ ....+.. |...|.+++|+|++++|++++.||.|++||++ .++++..+ .
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 999999887 4667777 89999999999999999999999999999985 35566777 8
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 023018 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN----IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (288)
Q Consensus 190 ~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 265 (288)
|...|++++|+|++++|++++.||.|++||+.+++. +..+.. |...|.+++|+|++++|++++.++.+ +|+.
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL---SQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC---SSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC---CCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 999999999999999999999999999999998876 455554 77889999999999999888766555 7766
Q ss_pred C
Q 023018 266 T 266 (288)
Q Consensus 266 ~ 266 (288)
.
T Consensus 280 ~ 280 (377)
T 3dwl_C 280 N 280 (377)
T ss_dssp C
T ss_pred C
Confidence 5
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-33 Score=235.45 Aligned_cols=216 Identities=16% Similarity=0.304 Sum_probs=187.2
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec-------------cccCcEEEEEEec-CC
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ-------------GHKDSVSSLAFSM-DG 119 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------~~~~~i~~~~~~~-~~ 119 (288)
.+....+.+|.++|++++|+|.++.+|++|+.||.|++|++.++.....+. +|...|.+++|+| ++
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 456678889999999999999667899999999999999999876544442 5899999999999 77
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCC---CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEE
Q 023018 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPR---GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTC 196 (288)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 196 (288)
.+|++++.||.|++||+.+++....+. +...+.++.|+|. +.++++++.+|.|++||+++++.+..+..|...|.+
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 799999999999999999998888776 6677999999984 449999999999999999999999999999999999
Q ss_pred EEEcCCCC-EEEEEeCCCeEEEEeCCCCc-eeEEEcCC------------CccccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 023018 197 GDFTPDGK-TICTGSDDATLRVWNPKSGE-NIHVIRGH------------PYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (288)
Q Consensus 197 ~~~~p~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~~------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 262 (288)
++|+|++. .|++++.||.|++||++++. .+..+... ..|...|.+++|+|++.+|++++.||.|++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 99999988 58999999999999998765 33333111 237788999999999999999999999999
Q ss_pred EEcCCCcE
Q 023018 263 VNITTGKV 270 (288)
Q Consensus 263 wd~~t~~~ 270 (288)
||+.+++.
T Consensus 272 wd~~~~~~ 279 (408)
T 4a11_B 272 WNSSNGEN 279 (408)
T ss_dssp EETTTCCB
T ss_pred EECCCCcc
Confidence 99987653
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.2e-34 Score=237.79 Aligned_cols=220 Identities=15% Similarity=0.201 Sum_probs=183.8
Q ss_pred ecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc---ccCcEEEEEEecCCCEEEEEeCCCeEEEEeCC
Q 023018 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG---HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (288)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (288)
.+|...|++++|+|.++.+|++++.||.|++|++.+ ..+..+.. |...|.+++|+|++++|++|+.||.|++||+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~- 192 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL- 192 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-
Confidence 379999999999996678999999999999999986 44445443 4478999999999999999999999999999
Q ss_pred CCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCc----ccEEEEeeccCCCeEEEEEcC-CCCEEEEEeC
Q 023018 138 SGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADR----AAYLNMFSGHGSSVTCGDFTP-DGKTICTGSD 211 (288)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~p-~~~~l~~~~~ 211 (288)
+++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+++ +..+..+ .|...|++++|+| ++.+|++++.
T Consensus 193 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 193 DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 5778888899999999999999998 999999999999999998 5666666 6999999999999 9999999999
Q ss_pred CCeEEEEeCCCCceeEEEcCCCc----cc----------cCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc-
Q 023018 212 DATLRVWNPKSGENIHVIRGHPY----HT----------EGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ- 276 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~----~~----------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~- 276 (288)
|+.|++||++++.....+..+.. +. ..+..++|+|++++ +++.||.|++||+.+++++..+..
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC
Confidence 99999999998877666654321 12 23444566666655 667899999999999999988742
Q ss_pred -----eEEEEEeec
Q 023018 277 -----YTCVAYDLD 285 (288)
Q Consensus 277 -----~~~~~~~~d 285 (288)
+..++|+|+
T Consensus 350 ~~~~~~~~~~~s~~ 363 (383)
T 3ei3_B 350 NAAGIISLNKFSPT 363 (383)
T ss_dssp TBCSCCCEEEECTT
T ss_pred CCCceEEEEEEecC
Confidence 344577765
No 83
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=243.68 Aligned_cols=216 Identities=15% Similarity=0.248 Sum_probs=180.6
Q ss_pred CCeeEeecCC------------CCEEEEEEcCCCC-cEEEEEeCCCeEEEEEccCCeee---------------------
Q 023018 55 DSTHIFSGHS------------DEVYSVACSPTDA-TLVATGGGDDKGFFWRINQGDWA--------------------- 100 (288)
Q Consensus 55 ~~~~~~~~h~------------~~v~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~--------------------- 100 (288)
+....+.+|. .+|++++|+|.+. .+|++++.||.|++|++.++...
T Consensus 72 ~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 151 (447)
T 3dw8_B 72 NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTT 151 (447)
T ss_dssp EEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCS
T ss_pred eEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccc
Confidence 3577889998 8899999999432 68999999999999999764432
Q ss_pred ------------------Ee-eccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCC-ceeE-------EeccCCCCEE
Q 023018 101 ------------------SE-IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG-NLKC-------TLEGPGGGVE 153 (288)
Q Consensus 101 ------------------~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~-------~~~~~~~~i~ 153 (288)
.. ..+|...|++++|+|++++|++| .||.|++||+.+. +... .+..|...|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 152 LRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp CCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE
T ss_pred eEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceE
Confidence 12 35799999999999999999998 7999999999843 3333 2457888999
Q ss_pred EEEEcCCC-CEEEEecCCCeEEEEECCcccE----EEEeeccCC------------CeEEEEEcCCCCEEEEEeCCCeEE
Q 023018 154 WVSWHPRG-HIVLAGSEDSTVWMWNADRAAY----LNMFSGHGS------------SVTCGDFTPDGKTICTGSDDATLR 216 (288)
Q Consensus 154 ~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~------------~i~~~~~~p~~~~l~~~~~dg~i~ 216 (288)
+++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|+
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE
Confidence 99999998 9999999999999999999876 677877775 8999999999999999998 9999
Q ss_pred EEeCCC-CceeEEEcCCCcccc------------CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 217 VWNPKS-GENIHVIRGHPYHTE------------GLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 217 i~d~~~-~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
+||+++ ++.+..+..+..... .+..++|+|++.+|++|+.||.|++||+.+++.+.
T Consensus 310 iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 310 VWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred EEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 999997 777777776431111 13458999999999999999999999999998875
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=235.33 Aligned_cols=225 Identities=14% Similarity=0.219 Sum_probs=189.1
Q ss_pred eecCCCCEEEEEEcCCC--CcEEEEEeCCCeEEEEEccCCe-eeEeeccccCcEEEEEE------ecCCCEEEEEeCCCe
Q 023018 60 FSGHSDEVYSVACSPTD--ATLVATGGGDDKGFFWRINQGD-WASEIQGHKDSVSSLAF------SMDGQLLASGGLDGL 130 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~ 130 (288)
..+|..+|++++|+|.. +.+|++|+.||.|++|++.+++ .+..+.+|...|.++.| +|++++|++++.||.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 34799999999999943 6899999999999999999887 88889999999999965 678999999999999
Q ss_pred EEEEeCCCCc-eeEEeccCCC----CEEEEE----EcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcC
Q 023018 131 VQIWDPSSGN-LKCTLEGPGG----GVEWVS----WHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP 201 (288)
Q Consensus 131 i~i~d~~~~~-~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p 201 (288)
|++||+.+++ ....+..+.+ .+.+++ |+|++++|++++.+|.|++||+++++.... ..|...|.+++|+|
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDR 219 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESC
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCC
Confidence 9999999886 6777765544 789998 678999999999999999999999887544 56889999999999
Q ss_pred ---CCCEEEEEeCCCeEEEEeCCCCceeEEEc--CCCccccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCc------
Q 023018 202 ---DGKTICTGSDDATLRVWNPKSGENIHVIR--GHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGK------ 269 (288)
Q Consensus 202 ---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~t~~------ 269 (288)
++.+|++++.||.|++||+++++....+. ....|...|.+++|+|++. +|++++.||.|++||+.++.
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 89999999999999999998766544433 1112788999999999998 89999999999999998653
Q ss_pred -------------EEEEe----cceEEEEEeec
Q 023018 270 -------------VCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 270 -------------~~~~~----~~~~~~~~~~d 285 (288)
++..+ ..+.+++|+|+
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 332 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD 332 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCC
Confidence 33333 45778888876
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-33 Score=235.66 Aligned_cols=227 Identities=21% Similarity=0.342 Sum_probs=195.4
Q ss_pred CCCCCeeEee--cCCCC--EEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc-ccCcEEEEEEecCCCEEEEEe
Q 023018 52 QPDDSTHIFS--GHSDE--VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGG 126 (288)
Q Consensus 52 ~~~~~~~~~~--~h~~~--v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~ 126 (288)
.+..+...+. +|... +.+++|++ ..+++++.||.|++|++.+++....+.. |...|++++|+|++++|++|+
T Consensus 77 ~~~~p~~~~~~~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 153 (401)
T 4aez_A 77 FNTTPERVLDAPGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL 153 (401)
T ss_dssp CCCSCSEEEECTTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCCCcceeeeCCCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC
Confidence 3444555554 66655 55577765 2366778899999999999988777765 789999999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECC-cccEEEEeeccCCCeEEEEEcCCCCE
Q 023018 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAYLNMFSGHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~p~~~~ 205 (288)
.||.|++||+.+++.+..+..|...|.+++|+ ++.|++++.||.|++||++ ....+..+..|...|.+++|+|++.+
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 231 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ 231 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE
Confidence 99999999999999999999999999999994 5799999999999999998 46778888999999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCC-CEEEEEe--CCCcEEEEEcCCCcEEEEe---cceEE
Q 023018 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGS--KDGSVHMVNITTGKVCCLN---FQYTC 279 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg~i~iwd~~t~~~~~~~---~~~~~ 279 (288)
|++++.||.|++||++++.....+.. |...|.+++|+|++ .++++++ .||.|++||+.+++++..+ ..+.+
T Consensus 232 l~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~ 308 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIPKFTKTN---HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTS 308 (401)
T ss_dssp EEEEETTSCEEEEETTCSSEEEEECC---CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEE
T ss_pred EEEEeCCCeEEEccCCCCCccEEecC---CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 99999999999999999988888776 77889999999966 5666654 6999999999999998887 56788
Q ss_pred EEEeecc
Q 023018 280 VAYDLDF 286 (288)
Q Consensus 280 ~~~~~df 286 (288)
++|+|+.
T Consensus 309 ~~~s~~~ 315 (401)
T 4aez_A 309 LIWSPHS 315 (401)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 8888763
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.2e-33 Score=238.18 Aligned_cols=212 Identities=21% Similarity=0.384 Sum_probs=184.7
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCee-------eEeeccccCcEEEEEEec-CCCEEEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-------ASEIQGHKDSVSSLAFSM-DGQLLASG 125 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~ 125 (288)
..+...+.+|...|++++|+|.+..+|++|+.||.|++|++.++.. ...+..|...|.+++|+| ++.+|+++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 5778889999999999999995555999999999999999987322 455678999999999999 67799999
Q ss_pred eCCCeEEEEeCCCC---ceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCc-ccEEEEeeccCCCeEEEEEc
Q 023018 126 GLDGLVQIWDPSSG---NLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADR-AAYLNMFSGHGSSVTCGDFT 200 (288)
Q Consensus 126 ~~dg~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~ 200 (288)
+.||.|++||++++ +....+..|...|++++|+|++. +|++|+.||.|++||+++ ..++..+..|...|++++|+
T Consensus 251 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp ETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC
Confidence 99999999999987 56777888999999999999887 789999999999999998 56788888999999999999
Q ss_pred CCCC-EEEEEeCCCeEEEEeCCCC--------------ceeEEEcCCCccccCeEEEEEcCCCC-EEEEEeCCCcEEEEE
Q 023018 201 PDGK-TICTGSDDATLRVWNPKSG--------------ENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVN 264 (288)
Q Consensus 201 p~~~-~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd 264 (288)
|++. +|++++.||.|++||+... +.+..+.+ |...|++++|+|++. +|++++.||.|++|+
T Consensus 331 p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC---CSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC---CCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 9885 6899999999999999762 33444433 788899999999998 899999999999999
Q ss_pred cCCC
Q 023018 265 ITTG 268 (288)
Q Consensus 265 ~~t~ 268 (288)
+.++
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 9754
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=223.87 Aligned_cols=220 Identities=20% Similarity=0.280 Sum_probs=194.8
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC---eeeEeeccccCcEEEEEEecCCCEEEEEeCCCe
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG---DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (288)
......+..|...|.+++|+| ++.+|++++.||.|++|++... +.+..+..|...|.+++| ++++|++++.||.
T Consensus 49 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~ 125 (313)
T 3odt_A 49 QWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT 125 (313)
T ss_dssp SEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred CEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC
Confidence 456678889999999999999 8889999999999999998764 567778889999999999 5679999999999
Q ss_pred EEEEeCCCCceeEEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEeec-cCCCeEEEEEcCCCCEEEE
Q 023018 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSG-HGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~ 208 (288)
|++|| .++....+..|...+.+++|+| ++..+++++.+|.|++|| ..+....+.. |...+.+++|+|++. +++
T Consensus 126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 200 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FIS 200 (313)
T ss_dssp EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEE
T ss_pred EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEE
Confidence 99999 6777888888999999999998 899999999999999999 4455666666 889999999999988 999
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEee
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDL 284 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~ 284 (288)
++.+|.|++||+++++.+..+.. |...|.+++|+|++ .|++++.||.|++||+.+++++..+ ..+.+++|+|
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 276 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEG---HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMS 276 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECT
T ss_pred ccCCCeEEEEECCchhhhhhhhc---CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEcc
Confidence 99999999999999999888876 77899999999998 5889999999999999999998887 4567788877
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 277 ~ 277 (313)
T 3odt_A 277 N 277 (313)
T ss_dssp T
T ss_pred C
Confidence 6
No 88
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9e-33 Score=234.74 Aligned_cols=209 Identities=24% Similarity=0.422 Sum_probs=172.6
Q ss_pred ecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee-------------------------------------
Q 023018 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI------------------------------------- 103 (288)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------------------------------------- 103 (288)
.+|...|++++|+| ++.+||+|+.||.|+||++.+++.+..+
T Consensus 144 ~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 144 EQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHH 222 (420)
T ss_dssp CSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCE
T ss_pred cCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeeccccee
Confidence 46788999999999 8889999999999999999887655444
Q ss_pred ----ccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc----eeEEeccCCCCEEEEEEcCCCC-EEEE--ecCCCe
Q 023018 104 ----QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN----LKCTLEGPGGGVEWVSWHPRGH-IVLA--GSEDST 172 (288)
Q Consensus 104 ----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~l~~--~~~dg~ 172 (288)
.+|...+..+.|+|++.++++++.||.+++|+..+++ .+.....|...|.+++|+|.+. ++++ |+.|++
T Consensus 223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~ 302 (420)
T 4gga_A 223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 302 (420)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE
T ss_pred eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE
Confidence 3455666677777777788888888888888877654 3445667888999999999554 5554 457999
Q ss_pred EEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCE
Q 023018 173 VWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS--DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTL 250 (288)
Q Consensus 173 i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 250 (288)
|++||+++++++..+.. ...+.++.|+|+++.+++++ .|+.|+|||+.+++++..+.+ |...|++++|+|+|.+
T Consensus 303 I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g---H~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 303 IRIWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGAT 378 (420)
T ss_dssp EEEEETTTTEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSC
T ss_pred EEEEeCCccccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCE
Confidence 99999999998888874 46788999999999988765 689999999999999999987 7889999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 251 ALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 251 l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|++|+.||+|+|||+....+....
T Consensus 379 l~S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 379 VASAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp EEEEETTTEEEEECCSCSSCC---
T ss_pred EEEEecCCeEEEEECCCCCccchh
Confidence 999999999999999876555444
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-33 Score=232.52 Aligned_cols=221 Identities=10% Similarity=0.054 Sum_probs=189.3
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe---eeEeeccccCcEEEEEEecCCC-EEEEEeCCCeEEE
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQI 133 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i 133 (288)
....+|.+.|++++|+| ++.+|++++.||.|++|++.++. ....+..|...|++++|+|+++ +|++|+.||.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 44568999999999999 78899999999999999999876 3445557999999999999999 9999999999999
Q ss_pred EeC-CCCceeEEecc--CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc---------ccEEEEeeccCCCeEEEEEcC
Q 023018 134 WDP-SSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR---------AAYLNMFSGHGSSVTCGDFTP 201 (288)
Q Consensus 134 ~d~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~~p 201 (288)
|++ .+++. ..+.. |...|.+++|+| +..|++++.|+.|++||+++ ++++..+. |...+.+++|+|
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 999 77654 67777 999999999999 99999999999999999988 77777776 889999999998
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-Ccee-EEEcCCCccccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCC------cEEE
Q 023018 202 DGKTICTGSDDATLRVWNPKS-GENI-HVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTG------KVCC 272 (288)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~t~------~~~~ 272 (288)
++ |++++.++.|++||+++ +... ...... +...+.+++|+| ++.+|++++.||.|++|++..+ +...
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESG--LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEECS--CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeecC--CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 86 99999999999999987 5432 222211 677899999999 9999999999999999999887 5555
Q ss_pred Eec-------------ceEEEEEeecc
Q 023018 273 LNF-------------QYTCVAYDLDF 286 (288)
Q Consensus 273 ~~~-------------~~~~~~~~~df 286 (288)
.+. .+.+++|+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~ 263 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred eeecccccccccccceeEEEEEEcCCC
Confidence 552 67788887753
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-33 Score=237.51 Aligned_cols=216 Identities=21% Similarity=0.342 Sum_probs=186.6
Q ss_pred EEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe----eeEeeccccCcEEEEEEec-CCCEEEEEeCCCeEEEEeCCCC--
Q 023018 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGD----WASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSSG-- 139 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-- 139 (288)
...++++|....++++++.+|.|+||++.... .+..+.+|...|++++|+| ++.+|++|+.||.|++|++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 44688998545566678999999999996642 3445778999999999999 8999999999999999999987
Q ss_pred -----ceeEEeccCCCCEEEEEEcCCC-CEEEEecCCCeEEEEECCcccEEEEe--eccCCCeEEEEEcCCCCEEEEEeC
Q 023018 140 -----NLKCTLEGPGGGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMF--SGHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 140 -----~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++.+|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 5677888999999999999998 69999999999999999999999998 789999999999999999999999
Q ss_pred CCeEEEEeCCCCceeEEE-cCCCcccc-CeEEEEEcCCCCEEEEE---eCCCcEEEEEcCCCcE-E--EEe---cceEEE
Q 023018 212 DATLRVWNPKSGENIHVI-RGHPYHTE-GLTCLTISADSTLALSG---SKDGSVHMVNITTGKV-C--CLN---FQYTCV 280 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~-~~~~~~~~-~v~~~~~~~~~~~l~~~---~~dg~i~iwd~~t~~~-~--~~~---~~~~~~ 280 (288)
||.|++||+++++.+..+ .. |.. .+.++.|+|++.+|++| +.|+.|++||+++++. + ..+ ..+.++
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRP---HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECS---SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred CCcEEEEeCCCCceeeeeccC---CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 999999999999888887 44 444 48899999999999999 7899999999998764 2 221 457778
Q ss_pred EEeec
Q 023018 281 AYDLD 285 (288)
Q Consensus 281 ~~~~d 285 (288)
+|+|+
T Consensus 274 ~~s~~ 278 (402)
T 2aq5_A 274 FFDPD 278 (402)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 88876
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.8e-32 Score=222.33 Aligned_cols=226 Identities=21% Similarity=0.332 Sum_probs=199.8
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
..+...+.+|...|++++|+| ++.+|++++.|+.|++|+............+...+..+.+++++.+|++++.|+.+++
T Consensus 76 ~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~ 154 (340)
T 4aow_A 76 GIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 154 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred ceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEE
Confidence 446778999999999999999 8889999999999999999999988888888899999999999999999999999999
Q ss_pred EeCCCCcee-EEeccCCCCEEEEEEcCCC--CEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 134 WDPSSGNLK-CTLEGPGGGVEWVSWHPRG--HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 134 ~d~~~~~~~-~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
||+...... .....|...+..++|++++ .++++++.|+.|++||+++++.+..+.+|..+|++++|+|++++|++|+
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 998766543 3345688899999998854 5788999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe-------------cce
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN-------------FQY 277 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~-------------~~~ 277 (288)
.||.|++||+++.+.+..+. +...+.+++|+|++.++ +++.|+.|++||+.++..+..+ ..+
T Consensus 235 ~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 235 KDGQAMLWDLNEGKHLYTLD----GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp TTCEEEEEETTTTEEEEEEE----CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred CCCeEEEEEeccCceeeeec----CCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 99999999999999888887 45679999999987665 5567999999999998877665 346
Q ss_pred EEEEEeec
Q 023018 278 TCVAYDLD 285 (288)
Q Consensus 278 ~~~~~~~d 285 (288)
.+++|+|+
T Consensus 310 ~~l~~s~d 317 (340)
T 4aow_A 310 TSLAWSAD 317 (340)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 78888876
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-34 Score=247.50 Aligned_cols=229 Identities=11% Similarity=0.040 Sum_probs=181.5
Q ss_pred CCCeeEeecCCCCEEEEEEcCCC-C-------cEEEE-------------------EeCCCeEEEEEccCCeee----Ee
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTD-A-------TLVAT-------------------GGGDDKGFFWRINQGDWA----SE 102 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~-~-------~~l~~-------------------~~~dg~i~iw~~~~~~~~----~~ 102 (288)
.+....+. +.++|.+++|+|.. + ++||+ ++.|++|+||++.+++.. ..
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 34444554 67899999999943 1 56666 457789999999876542 34
Q ss_pred eccccCcEEEEEEecC------CCEEEEEeCCCeEEEEeCCCCce-----------eEEeccCCCCEEEEEEcCCCCEEE
Q 023018 103 IQGHKDSVSSLAFSMD------GQLLASGGLDGLVQIWDPSSGNL-----------KCTLEGPGGGVEWVSWHPRGHIVL 165 (288)
Q Consensus 103 ~~~~~~~i~~~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~l~ 165 (288)
+..|.+.|.+++|+|+ +.+||+++.||+|++||+..+.. ...+.+|...|.+++|++. ..|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEE
Confidence 5667889999999996 56999999999999999987642 2367788899999999985 4899
Q ss_pred EecCCCeEEEEECCcc-cEEEEeeccCCCeEEE--EEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEE
Q 023018 166 AGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCG--DFTPDG-KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTC 241 (288)
Q Consensus 166 ~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~--~~~p~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 241 (288)
+|+.||+|++||++++ .+...+.+|..+|+++ .|+|++ .+|++|+.|++|+|||+++++....+.++. ....|.+
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~ 360 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNLVP 360 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSCCC
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-ccCcccc
Confidence 9999999999999976 4456688999999999 578887 899999999999999999887766665421 1134789
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 242 LTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 242 ~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
++|+|++..|++++.|+.|++||+++++++..+ ..+.+++|+|+
T Consensus 361 v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 361 VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp EEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred eEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 999999999999999999999999999876665 45777888775
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.3e-33 Score=229.27 Aligned_cols=215 Identities=11% Similarity=0.067 Sum_probs=187.3
Q ss_pred eeEeecCCCCEEEEEEcCCCCc-EEEEEeCCCeEEEEEc-cCCeeeEeecc--ccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 57 THIFSGHSDEVYSVACSPTDAT-LVATGGGDDKGFFWRI-NQGDWASEIQG--HKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~dg~i~iw~~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
...+.+|...|++++|+| ++. +|++|+.||.|++|++ .+++. ..+.. |...|.+++|+| +.+|++++.||.|+
T Consensus 49 ~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred ceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 566679999999999999 688 9999999999999999 77654 67778 999999999999 99999999999999
Q ss_pred EEeCCC---------CceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc-cc--EEEEeeccCCCeEEEEEc
Q 023018 133 IWDPSS---------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-AA--YLNMFSGHGSSVTCGDFT 200 (288)
Q Consensus 133 i~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~~~~~~~~i~~~~~~ 200 (288)
+||+.+ ++.+..+. +...+.+++|+|++ +++++.++.|++||+++ +. .......+...+.+++|+
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~ 202 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC
Confidence 999987 66666666 77889999999876 99999999999999988 54 333445678899999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCC------ceeEEEcCCCc------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 201 P-DGKTICTGSDDATLRVWNPKSG------ENIHVIRGHPY------HTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 201 p-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
| ++++|++++.+|.|++|++... +....+..+.. |...|.+++|+|++++|++++.||.|++||+.+
T Consensus 203 ~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 9 9999999999999999999876 67777776421 244899999999999999999999999999999
Q ss_pred CcEEEEecce
Q 023018 268 GKVCCLNFQY 277 (288)
Q Consensus 268 ~~~~~~~~~~ 277 (288)
++++..+..+
T Consensus 283 ~~~~~~~~~~ 292 (342)
T 1yfq_A 283 RKKIKNFAKF 292 (342)
T ss_dssp TEEEEECCCC
T ss_pred HhHhhhhhcc
Confidence 9999888654
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=229.47 Aligned_cols=210 Identities=28% Similarity=0.368 Sum_probs=180.2
Q ss_pred ecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCC---CEEEEEeCCCeEEEEeCC
Q 023018 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDG---QLLASGGLDGLVQIWDPS 137 (288)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~ 137 (288)
.+|...|++++|+|.++.+|++++.||.|++|++.+++....+. +...+.++.|+|.+ .++++++.+|.|++||+.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 36999999999999777899999999999999999999888887 77889999999854 499999999999999999
Q ss_pred CCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCccc-EEEEe---------------eccCCCeEEEEEc
Q 023018 138 SGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAA-YLNMF---------------SGHGSSVTCGDFT 200 (288)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~i~~~~~~ 200 (288)
+++.+..+..|...|.+++|+|+++ +|++++.||.|++||++++. .+..+ ..|...|.+++|+
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 9999999999999999999999988 68999999999999998765 33333 5688899999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCce-----------------------------------------------eEEEcCCC
Q 023018 201 PDGKTICTGSDDATLRVWNPKSGEN-----------------------------------------------IHVIRGHP 233 (288)
Q Consensus 201 p~~~~l~~~~~dg~i~i~d~~~~~~-----------------------------------------------~~~~~~~~ 233 (288)
|++++|++++.||.|++||+.+++. +..+..
T Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-- 332 (408)
T 4a11_B 255 SDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG-- 332 (408)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--
T ss_pred CCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc--
Confidence 9999999999999999999876542 222332
Q ss_pred ccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 234 YHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 234 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|...|.+++|+|++.+|++++.||.|++|++.+++.+...
T Consensus 333 -~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 333 -HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp -CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred -CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 7789999999999999999999999999999999887654
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-33 Score=238.57 Aligned_cols=212 Identities=15% Similarity=0.205 Sum_probs=182.5
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEcc---CCeeeEeecc------------ccCcEEEEE--EecCCCEEEE
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN---QGDWASEIQG------------HKDSVSSLA--FSMDGQLLAS 124 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~---~~~~~~~~~~------------~~~~i~~~~--~~~~~~~l~~ 124 (288)
+|..+|++++|+| ++.+|++|+.||.|++|++. +++....+.. +...+.++. +++++.+|++
T Consensus 109 ~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 109 DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 5999999999999 88899999999999999995 4444333322 445666666 4578889999
Q ss_pred EeCCCeEEEEeCCCCceeEEecc--CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee-ccCCCeEEEEEcC
Q 023018 125 GGLDGLVQIWDPSSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTP 201 (288)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~p 201 (288)
|+.||.|++||+++++.+..+.. |...|.+++|+|++++|++|+.||.|++||+++++++..+. .|..+|++++|+|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99999999999999999999987 78899999999999999999999999999999999988886 6788999997665
Q ss_pred ----CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC-----------------------ccccCeEEEEEcCCCCEEEEE
Q 023018 202 ----DGKTICTGSDDATLRVWNPKSGENIHVIRGHP-----------------------YHTEGLTCLTISADSTLALSG 254 (288)
Q Consensus 202 ----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~ 254 (288)
++.+|++++.||.|++||+++++.+..+..+. .|...|++++|+ ++.+|++|
T Consensus 268 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 346 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD 346 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE
T ss_pred ccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec
Confidence 57799999999999999999999888877542 156679999999 77899999
Q ss_pred eCCCcEEEEEcCCCcEEEEec
Q 023018 255 SKDGSVHMVNITTGKVCCLNF 275 (288)
Q Consensus 255 ~~dg~i~iwd~~t~~~~~~~~ 275 (288)
+.||.|++||+.+++++..+.
T Consensus 347 ~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 347 EATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp GGGTEEEEEETTCGGGCEEEE
T ss_pred CCCCeEEEEECCCcccceEEe
Confidence 999999999999998777653
No 96
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.6e-32 Score=241.04 Aligned_cols=217 Identities=22% Similarity=0.313 Sum_probs=197.0
Q ss_pred CCeeEeecCCCC-EEEEEEcCC-CCcEEEEEeCCCeEEEEEccCC--------eeeEeeccccCcEEEEEEecCCCEEEE
Q 023018 55 DSTHIFSGHSDE-VYSVACSPT-DATLVATGGGDDKGFFWRINQG--------DWASEIQGHKDSVSSLAFSMDGQLLAS 124 (288)
Q Consensus 55 ~~~~~~~~h~~~-v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~ 124 (288)
.....+.+|... |++++|+|. ++.+|++|+.||.|++|++.++ +....+..|..+|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 678899999999 999999993 4678999999999999999754 677778889999999999999999999
Q ss_pred EeCC----CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEEEeeccCC---CeEE
Q 023018 125 GGLD----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGS---SVTC 196 (288)
Q Consensus 125 ~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~i~~ 196 (288)
++.+ +.|++|| .++.+..+..|...|.+++|+|+++ .+++++.|+.|++||+++++.+..+..|.. .|++
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 9987 7899998 5677888899999999999999998 899999999999999999999999999999 9999
Q ss_pred EEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEE-cCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 197 GDFTPD-GKTICTGSDDATLRVWNPKSGENIHVI-RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 197 ~~~~p~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
++|+|+ +++|++++.||.|++||+.+++.+..+ .....|...|.+++|+ ++.+|++++.||.|++||+.+++.+..+
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999 999999999999999999999988887 3111278899999999 9999999999999999999999988876
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.7e-33 Score=238.99 Aligned_cols=229 Identities=14% Similarity=0.157 Sum_probs=183.4
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc--ccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG--HKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
....+.+|.++|++|+|+|.++.+|++|+.||+|++||+.+......... +...+.+++|+|++.+|++|+.||.|++
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL 235 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee
Confidence 34456789999999999997788999999999999999987654433332 3456789999999999999999999999
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEE---EeeccCCCeEEEEEcCCCCEEEEE
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLN---MFSGHGSSVTCGDFTPDGKTICTG 209 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~p~~~~l~~~ 209 (288)
||+.. +.+..+..|...|.+++|+|++. +|++|+.|+.|++||+++.+... ...+|..+|++++|+|++.+|+++
T Consensus 236 wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 236 LNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp EESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred eccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 99864 55667888999999999999876 78899999999999998865433 335689999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEcCCCcc---ccCeEEEEEcCCCCEEEEEe------------CCCcEEEEEcCCCcEEEEe
Q 023018 210 SDDATLRVWNPKSGENIHVIRGHPYH---TEGLTCLTISADSTLALSGS------------KDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~t~~~~~~~ 274 (288)
+.||.|+|||+.++.....+..+... ...+..+.|+|++.++++++ .++.|++||+.+|+++..+
T Consensus 315 ~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 315 DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 99999999999998877776553211 11233456777777766664 2357999999999999887
Q ss_pred c-----ceEEE-EEeec
Q 023018 275 F-----QYTCV-AYDLD 285 (288)
Q Consensus 275 ~-----~~~~~-~~~~d 285 (288)
. .+.++ +|+|+
T Consensus 395 ~~~~~~~v~s~~~fspd 411 (435)
T 4e54_B 395 YDPESSGISSLNEFNPM 411 (435)
T ss_dssp CCSSCCCCCCEEEECTT
T ss_pred eCCCCCcEEEEEEECCC
Confidence 3 23444 57775
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.5e-31 Score=228.73 Aligned_cols=221 Identities=24% Similarity=0.479 Sum_probs=184.5
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
.+....+.+|...|.+++|++ ..+++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|++|+.||.|++
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE
T ss_pred CcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE
Confidence 355667777888888888853 46778888888888888888888888888888888887 6677888888888888
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCC
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA 213 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg 213 (288)
||+.+++.+..+..|...+.+++| ++.++++++.||.|++||+++++.+..+..|...+.++.++ +++|++|+.||
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg 339 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADS 339 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTS
T ss_pred EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCC
Confidence 888888888888888888888888 67889999999999999998888888888888888887774 67899999999
Q ss_pred eEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---------cceEEEEEee
Q 023018 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---------FQYTCVAYDL 284 (288)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---------~~~~~~~~~~ 284 (288)
.|++||+++++.+..+..+..|...|.+++|+ +.+|++|+.||.|++||+.+++.+..+ ..+.+++|+|
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred eEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence 99999999998888888766688899999996 579999999999999999999998877 3466777776
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 418 ~ 418 (445)
T 2ovr_B 418 T 418 (445)
T ss_dssp S
T ss_pred C
Confidence 5
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-32 Score=244.00 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=189.5
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----eeeEeeccccCc-EEEEEEec--CCCEEEEEeCCCeEEEE
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDS-VSSLAFSM--DGQLLASGGLDGLVQIW 134 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~-i~~~~~~~--~~~~l~~~~~dg~i~i~ 134 (288)
.|.+.|++++|+| ++.+|++++ ++.|++|++.++ +....+.+|... |++++|+| ++++|++++.||.|++|
T Consensus 16 ~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 6889999999999 778888887 789999999998 889999999999 99999999 99999999999999999
Q ss_pred eCCCC--------ceeEEeccCCCCEEEEEEcCCCCEEEEecCC----CeEEEEECCcccEEEEeeccCCCeEEEEEcCC
Q 023018 135 DPSSG--------NLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFSGHGSSVTCGDFTPD 202 (288)
Q Consensus 135 d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~ 202 (288)
++.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+..|...|.+++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSS
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCC
Confidence 99754 6677788899999999999999999999987 6888888 56788889999999999999999
Q ss_pred CC-EEEEEeCCCeEEEEeCCCCceeEEEcCCCcccc---CeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 203 GK-TICTGSDDATLRVWNPKSGENIHVIRGHPYHTE---GLTCLTISAD-STLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 203 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+. .|++++.|+.|++||+.+++.+..+.. |.. .|.+++|+|+ +++|++++.||.|++||+.+++.+..+
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASDRT---HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECS---SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeeecc---cCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 88 899999999999999999998888887 556 8999999999 999999999999999999999999887
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.6e-32 Score=232.87 Aligned_cols=218 Identities=22% Similarity=0.484 Sum_probs=193.6
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
..+....+.+|..+|++++| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|++ .+|++|+.||.|+
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~ 236 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIA 236 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEE
T ss_pred CCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEE
Confidence 45677889999999999999 456999999999999999999999999999999999999964 5999999999999
Q ss_pred EEeCCCCcee---EEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEE
Q 023018 133 IWDPSSGNLK---CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG 209 (288)
Q Consensus 133 i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~ 209 (288)
+||+.++... ..+.+|...|.+++| +++++++|+.||.|++||+++++.+..+..|...|.++.|+ +.+|++|
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g 312 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSG 312 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEE
Confidence 9999988655 567789999999999 67899999999999999999999999999999999999994 6899999
Q ss_pred eCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc---------EEEEec----c
Q 023018 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK---------VCCLNF----Q 276 (288)
Q Consensus 210 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~---------~~~~~~----~ 276 (288)
+.||.|++||+++++.+..+.. |...|.+++| ++.+|++|+.||.|++||+.+++ ++..+. .
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~ 387 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEG---HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR 387 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECC---CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSC
T ss_pred eCCCeEEEEECCCCCEEEEEeC---CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCC
Confidence 9999999999999999988887 7788999998 68899999999999999998776 677664 3
Q ss_pred eEEEEEee
Q 023018 277 YTCVAYDL 284 (288)
Q Consensus 277 ~~~~~~~~ 284 (288)
+.+++|..
T Consensus 388 v~~l~~~~ 395 (435)
T 1p22_A 388 VFRLQFDE 395 (435)
T ss_dssp CCCEEECS
T ss_pred eEEEEeCC
Confidence 44555543
No 101
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-31 Score=218.07 Aligned_cols=212 Identities=25% Similarity=0.424 Sum_probs=178.2
Q ss_pred CCCCeeEe--ecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee---------------------------
Q 023018 53 PDDSTHIF--SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI--------------------------- 103 (288)
Q Consensus 53 ~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------------------------- 103 (288)
..+.++.+ .+|...|++++|+| ++++|++|+.||+|++|++.+++.+..+
T Consensus 54 tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 54 SGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp TCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceE
Confidence 34555555 46888999999999 7889999999999999999887654433
Q ss_pred --------------ccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCce----eEEeccCCCCEEEEEEcCCCC-E-
Q 023018 104 --------------QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL----KCTLEGPGGGVEWVSWHPRGH-I- 163 (288)
Q Consensus 104 --------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~- 163 (288)
.+|...+..+.+++++++|++++.||.|++||+.+++. ......+.+.+.+++++|.+. .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 212 (318)
T 4ggc_A 133 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 212 (318)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEE
T ss_pred eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEE
Confidence 34667788889999999999999999999999987653 344556778899999999655 3
Q ss_pred -EEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeEEEcCCCccccCeE
Q 023018 164 -VLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS--DDATLRVWNPKSGENIHVIRGHPYHTEGLT 240 (288)
Q Consensus 164 -l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 240 (288)
+++++.++.|++||.+......... +...+..+.|+|.+..+++++ .|+.|++||+++++++..+.+ |...|+
T Consensus 213 ~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g---H~~~V~ 288 (318)
T 4ggc_A 213 ATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVL 288 (318)
T ss_dssp EEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEE
T ss_pred EEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC---CCCCEE
Confidence 3466788999999999887666554 677899999999999887765 789999999999999999987 788999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 023018 241 CLTISADSTLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 241 ~~~~~~~~~~l~~~~~dg~i~iwd~~t~~ 269 (288)
+++|+|++.+|++|+.||+|+|||+....
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999999999999999997654
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-31 Score=228.04 Aligned_cols=221 Identities=25% Similarity=0.509 Sum_probs=199.5
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
..+.+..+.+|..+|++++|++ .++++|+.||.|++|++.+++.+..+.+|...|.++.|+ +.+|++|+.||.|+
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLR 222 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred CCcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEE
Confidence 4567788999999999999974 589999999999999999999999999999999999995 56899999999999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCC
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d 212 (288)
+||+.+++.+..+..|...+.+++| ++.++++|+.||.|++||+++++.+..+.+|...|.++.| ++.++++++.|
T Consensus 223 ~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 298 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD 298 (445)
T ss_dssp EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCC
Confidence 9999999999999999999999999 6789999999999999999999999999999999999999 78899999999
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec-------ceEEEEEeec
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNF-------QYTCVAYDLD 285 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~-------~~~~~~~~~d 285 (288)
|.|++||+++++.+..+.. |...+.++.++ +.+|++|+.||.|++||+.+++++..+. .+.+++|++.
T Consensus 299 ~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 373 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTG---HQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 373 (445)
T ss_dssp SCEEEEETTTCCEEEEECC---CCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSS
T ss_pred CeEEEEECCCCCEEEEEcC---CcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCC
Confidence 9999999999999888876 66778887774 6799999999999999999999998874 3667777665
Q ss_pred cc
Q 023018 286 FV 287 (288)
Q Consensus 286 f~ 287 (288)
++
T Consensus 374 ~l 375 (445)
T 2ovr_B 374 FV 375 (445)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-32 Score=233.16 Aligned_cols=205 Identities=16% Similarity=0.097 Sum_probs=177.7
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe---eeEeecc------------------------------------
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQG------------------------------------ 105 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~------------------------------------ 105 (288)
.++.+++|+| ++.+|+++ .++.|++|++.+++ .+..+..
T Consensus 5 ~p~~~v~~s~-dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSR-DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECS-SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecC-CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 5789999999 66666655 46899999999888 5555442
Q ss_pred ------------------ccCcEEEEEEecCCCEE-EEEeCCCeEEEEeCC--CCceeEEec--cCCCCEEEEEEcCCCC
Q 023018 106 ------------------HKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPS--SGNLKCTLE--GPGGGVEWVSWHPRGH 162 (288)
Q Consensus 106 ------------------~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~--~~~~~~~~~--~~~~~i~~~~~~~~~~ 162 (288)
|...|++++|+|++++| ++|+.||.|++|++. +++.+..+. .+...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 33369999999999986 889999999999999 888887776 5668899999999999
Q ss_pred EEEEecCCCeEEEEECCcccEEE----EeeccCCCeEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCcc
Q 023018 163 IVLAGSEDSTVWMWNADRAAYLN----MFSGHGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENIHVIRGHPYH 235 (288)
Q Consensus 163 ~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~p~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 235 (288)
+|++|+.+|.|++|++.++.... .+.+|...|++++|+|+ +++|++++.|+.|++||++++..+..+... |
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--h 240 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG--H 240 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC--C
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC--C
Confidence 99999999999999998876544 77889999999999999 999999999999999999998887764321 7
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 236 TEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 236 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
...|.+++|+ ++.+|++++.|+.|++||+.+++++..+
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEE
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeee
Confidence 8899999999 9999999999999999999999988876
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-31 Score=227.84 Aligned_cols=214 Identities=27% Similarity=0.501 Sum_probs=189.7
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeC
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (288)
.....+|...|+++++ ++.++++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||+
T Consensus 126 ~~~~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp EECCCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred EecccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence 3444567788999987 5679999999999999999999999999999999999998 7889999999999999999
Q ss_pred CCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEE---EEeeccCCCeEEEEEcCCCCEEEEEeCCC
Q 023018 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL---NMFSGHGSSVTCGDFTPDGKTICTGSDDA 213 (288)
Q Consensus 137 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~p~~~~l~~~~~dg 213 (288)
.+++.+..+..|...|.+++|++ ..+++|+.||.|++||++++... ..+.+|...|.+++| ++++|++|+.||
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 99999999999999999999974 59999999999999999887654 667789999999999 688999999999
Q ss_pred eEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc----eEEEEEee
Q 023018 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ----YTCVAYDL 284 (288)
Q Consensus 214 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~----~~~~~~~~ 284 (288)
.|++||+++++.+..+.. |...|.++.|+ +.+|++|+.||.|++||+++++++..+.. +.+++|..
T Consensus 277 ~i~vwd~~~~~~~~~~~~---~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 346 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNG---HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN 346 (435)
T ss_dssp EEEEEETTTCCEEEEEEC---CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCS
T ss_pred eEEEEECCcCcEEEEEcC---CCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecC
Confidence 999999999999888886 77889999984 67999999999999999999999998844 45555543
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-31 Score=254.65 Aligned_cols=212 Identities=23% Similarity=0.386 Sum_probs=193.7
Q ss_pred CCCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEec--CCCEEEEEeCCC
Q 023018 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDG 129 (288)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg 129 (288)
.....+..+.+|...|++++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.++++|+.||
T Consensus 645 ~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 645 ETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp TTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred CCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 34567888999999999999999 788999999999999999999999999999999999999999 455899999999
Q ss_pred eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEe----------------------
Q 023018 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---------------------- 187 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---------------------- 187 (288)
.|++||+.+++....+.+|.+.|.+++|+|+++++++++.||.|++||+++++....+
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 9999999999999999999999999999999999999999999999999776543322
Q ss_pred ---------------------------------eccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCc
Q 023018 188 ---------------------------------SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY 234 (288)
Q Consensus 188 ---------------------------------~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 234 (288)
.+|...+.+++|+|++.++++++.+|.|++||+.++..+..+.+
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--- 880 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG--- 880 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC---
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC---
Confidence 15677899999999999999999999999999999988888876
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
|...|.+++|+|++.+|++++.||.|++|++.+
T Consensus 881 h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred CccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 788999999999999999999999999999764
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-33 Score=228.36 Aligned_cols=202 Identities=8% Similarity=0.034 Sum_probs=165.7
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEcc---------CCeeeEeec-cccCcEEEEEEec--CCCEEEEEeCCCeE
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRIN---------QGDWASEIQ-GHKDSVSSLAFSM--DGQLLASGGLDGLV 131 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~---------~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i 131 (288)
...|.++.|+| . +++++.|++|++|+.. +++.+..+. .|..+|.+++|+| ++++|++++.||.|
T Consensus 76 ~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i 151 (343)
T 3lrv_A 76 TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTI 151 (343)
T ss_dssp EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCE
T ss_pred cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcE
Confidence 35677788888 3 8899999999999765 444344443 5678999999999 99999999999999
Q ss_pred EEEeCCCCceeEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEE-EEeec-cCCCeEEEEEcCCCCEEEE
Q 023018 132 QIWDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL-NMFSG-HGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 132 ~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~p~~~~l~~ 208 (288)
++||+.+++....+.. +...+.+++|+|++.+|++|+.||.|++||+++++.+ ..+.. |..+|++++|+|++.+|++
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 9999999988766643 4557999999999999999999999999999999877 77887 9999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCe--EEEEEcCCCCEEEEEeC-CCcEEEEEcCCCcE
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGL--TCLTISADSTLALSGSK-DGSVHMVNITTGKV 270 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-dg~i~iwd~~t~~~ 270 (288)
++ ++.|++||+++++.+..+.....+...+ .+++|+|++++|++++. |+.|++|++.++..
T Consensus 232 ~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 232 EC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred Ee-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 99 5599999999887665544322222333 46999999999999988 99999999976543
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-33 Score=250.45 Aligned_cols=216 Identities=19% Similarity=0.285 Sum_probs=188.0
Q ss_pred CCCeeEeecCCCCEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEecC--CCEEEEEeCC
Q 023018 54 DDSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMD--GQLLASGGLD 128 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d 128 (288)
......+.+|.++|++++|+|. ++.+|++|+.||.|++|++.+++ .+..+..|...|++++|+|+ +.+|++|+.|
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 4567788999999999999983 28899999999999999999987 67778889999999999999 9999999999
Q ss_pred CeEEEEeCCCC--ceeEEeccCCCCEEEEEEcC-------------CCCEEEEecCCCeEEEEECCcc----cEEEEeec
Q 023018 129 GLVQIWDPSSG--NLKCTLEGPGGGVEWVSWHP-------------RGHIVLAGSEDSTVWMWNADRA----AYLNMFSG 189 (288)
Q Consensus 129 g~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~ 189 (288)
|.|++||+.++ .....+..|...|.+++|+| ++..+++|+.||.|++||++++ .....+.+
T Consensus 123 g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 99999999877 34455677889999999999 4899999999999999999876 56677888
Q ss_pred cCCCeEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCcee--EEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 190 HGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENI--HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 190 ~~~~i~~~~~~p~---~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
|..+|++++|+|+ +.+|++++.||.|++||++++... ..+.....+...|++++|+|++.+|++++.||.|++|+
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 9999999999999 899999999999999999876421 12222233778899999999999999999999999999
Q ss_pred cCCCc
Q 023018 265 ITTGK 269 (288)
Q Consensus 265 ~~t~~ 269 (288)
+.++.
T Consensus 283 ~~~~~ 287 (753)
T 3jro_A 283 ENLEG 287 (753)
T ss_dssp CCSSS
T ss_pred cCCCC
Confidence 98643
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4.8e-32 Score=218.25 Aligned_cols=176 Identities=14% Similarity=0.196 Sum_probs=143.6
Q ss_pred CCeEEEEEc-cCCeeeEeeccccCcEEEEEEec---CCCEEEEEeCCCeEEEEeCCCCceeEEeccCC---CCEEEEEEc
Q 023018 86 DDKGFFWRI-NQGDWASEIQGHKDSVSSLAFSM---DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG---GGVEWVSWH 158 (288)
Q Consensus 86 dg~i~iw~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~ 158 (288)
|+.|++|++ .+++.+..+..|...++.++|++ ++.+|++++.|++|+|||+.+++.++.+.+|. ..+.+++|+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 788888888 44777777778888888888888 66899999999999999999999999998644 357788999
Q ss_pred CCCCEE------------EEecCCCeEEEEECCcccEEEEe-----eccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q 023018 159 PRGHIV------------LAGSEDSTVWMWNADRAAYLNMF-----SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK 221 (288)
Q Consensus 159 ~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~ 221 (288)
|++.++ ++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++++++.|++|+|||+.
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECC
Confidence 999876 56778999999999999887665 2555555544444 7889999999999999999
Q ss_pred CCceeEEEcCCCccccC-eEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 222 SGENIHVIRGHPYHTEG-LTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 222 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
+++.+.++.+ |... +..++|+|+|++|++|+.|++|+|||+.
T Consensus 314 tGk~l~tL~g---H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 314 LGQCTALLPP---VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TCSEEEEECC---C--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCcEEEEecC---CCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 9999999986 4444 4468999999999999999999999963
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.7e-32 Score=224.83 Aligned_cols=173 Identities=20% Similarity=0.233 Sum_probs=143.8
Q ss_pred cEEEEEEecCCCEEEEEe--CCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEE-
Q 023018 109 SVSSLAFSMDGQLLASGG--LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN- 185 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~- 185 (288)
.+.+++|+|+|+++++++ .|++|+|||+.+++.+..+. |.+.|.+++|+|+|+++++++. +.+++|+..++..+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIAR 212 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceee
Confidence 467899999999877554 68999999999999888876 6678999999999999999986 456667666666543
Q ss_pred -EeeccCCCeEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCcee----EEEcCCCccccCeEEEEEcCCCCEEEEEeC
Q 023018 186 -MFSGHGSSVTCGDFTPDGKTICTGSDDA----TLRVWNPKSGENI----HVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (288)
Q Consensus 186 -~~~~~~~~i~~~~~~p~~~~l~~~~~dg----~i~i~d~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (288)
....|...|++++|+|++.++++++.++ .+++|++...... ..+.. |..+|++++|+|+|++|++|+.
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN---RFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES---SCSCEEEEEECTTSCEEEEEET
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC---CCCCeEeEEECCCCCceEEEcC
Confidence 3446788999999999999999999887 6888998766432 23333 7788999999999999999999
Q ss_pred CCcEEEEEcCCCcEEEEe-----cceEEEEEeecc
Q 023018 257 DGSVHMVNITTGKVCCLN-----FQYTCVAYDLDF 286 (288)
Q Consensus 257 dg~i~iwd~~t~~~~~~~-----~~~~~~~~~~df 286 (288)
|+.|+|||+.+++++..+ ..+.+++|+||-
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 999999999999999875 457889999873
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.7e-31 Score=220.76 Aligned_cols=209 Identities=12% Similarity=0.118 Sum_probs=165.8
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQ 132 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~ 132 (288)
..++..+.+|..+|++++|+| ++.+||+|+.+| +++|++.+.+...... ...+..+++.++++.+ ++++.+++|+
T Consensus 9 ~~~~~~~~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 9 RNPIVPENHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp ----------CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred cCCccccccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 345566789999999999999 788999988765 7899998876655543 2357788888888877 5677889999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCC-----------------------------------CEEEE--ecCCCeEEE
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRG-----------------------------------HIVLA--GSEDSTVWM 175 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------------~~l~~--~~~dg~i~i 175 (288)
+||+.+++.+..+. +...|.+++|+++. ..+++ |+.+|.|++
T Consensus 85 iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 85 IWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred EEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 99999999888876 45578888887642 23344 578899999
Q ss_pred EECCccc---------------E-EEEeeccCCCeEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCceeEEEc-CCCcccc
Q 023018 176 WNADRAA---------------Y-LNMFSGHGSSVTCGDFTPDGKTICTGSDDAT-LRVWNPKSGENIHVIR-GHPYHTE 237 (288)
Q Consensus 176 ~d~~~~~---------------~-~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~-~~~~~~~ 237 (288)
||++++. + +..+.+|..+|++++|+|++++|++|+.|++ |++||+++++.+..+. +. |..
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~--h~~ 241 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL--DRA 241 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT--CCS
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CCC
Confidence 9998765 2 6778899999999999999999999999998 9999999999988887 32 668
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 023018 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~ 269 (288)
.|.+++|+|++.+|++++.|+.|++||+.++.
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 89999999999999999999999999998653
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.4e-32 Score=230.17 Aligned_cols=211 Identities=15% Similarity=0.132 Sum_probs=160.2
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeee-----EeeccccCcEEEEEEec--------CCCEEEEEeCCCeEEEEeCCCCcee
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWA-----SEIQGHKDSVSSLAFSM--------DGQLLASGGLDGLVQIWDPSSGNLK 142 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~i~~~~~~~--------~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (288)
+..++|+++.|++|+||+..++... ..+.+|.+.|++++|+| ++++||+|+.|++|+|||+.++...
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 6678999999999999999987643 34678999999999998 7889999999999999999988888
Q ss_pred EEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEEE-------------------------eeccCCCeEE
Q 023018 143 CTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNM-------------------------FSGHGSSVTC 196 (288)
Q Consensus 143 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~-------------------------~~~~~~~i~~ 196 (288)
..+..|...+.+++|+|++. +|++++.||+|++||+++++.... ..+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 88888899999999999874 899999999999999987654322 1346678888
Q ss_pred EEEc-CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCc---------------cccCeEEEEEcC--CCCEEEEEeCCC
Q 023018 197 GDFT-PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY---------------HTEGLTCLTISA--DSTLALSGSKDG 258 (288)
Q Consensus 197 ~~~~-p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~--~~~~l~~~~~dg 258 (288)
+.|+ |++..|++++.|+.+++||+.+++....+..+.. .........|+| ++.++++|+.||
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg 339 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG 339 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC
Confidence 9887 7999999999999999999987765554433210 001112233444 445677888999
Q ss_pred cEEEEEcCCCcEEEEe----cceEEEEEeecc
Q 023018 259 SVHMVNITTGKVCCLN----FQYTCVAYDLDF 286 (288)
Q Consensus 259 ~i~iwd~~t~~~~~~~----~~~~~~~~~~df 286 (288)
.|++||+.+++++..+ ..+.+++|+||-
T Consensus 340 ~V~lwd~~~~~~~~~~~~~~~~V~svafspdG 371 (393)
T 4gq1_A 340 LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDG 371 (393)
T ss_dssp EEEEEETTCTTCCEEEEECSSCEEEEEECTTS
T ss_pred EEEEEECCCCcEEEEecCCCCcEEEEEEcCCC
Confidence 9999999999887765 567888998873
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-30 Score=209.61 Aligned_cols=228 Identities=21% Similarity=0.327 Sum_probs=183.2
Q ss_pred CCCCCCeeEeecC--CC--CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec--cccCcEEEEEEecCCCEEEE
Q 023018 51 EQPDDSTHIFSGH--SD--EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSMDGQLLAS 124 (288)
Q Consensus 51 ~~~~~~~~~~~~h--~~--~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~ 124 (288)
-.|..|.++|.+. .+ .+.+|+|++ ++ +||+|. |++|+|||+.+++.+..+. .|...|++++|+|++++|++
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~-~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSS-GN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECT-TS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECC-CC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 4556677777643 22 257899998 44 777765 8999999999998877664 57788999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeEEec-----------------------------------------cCCCCEEEEEEcCCCCE
Q 023018 125 GGLDGLVQIWDPSSGNLKCTLE-----------------------------------------GPGGGVEWVSWHPRGHI 163 (288)
Q Consensus 125 ~~~dg~i~i~d~~~~~~~~~~~-----------------------------------------~~~~~i~~~~~~~~~~~ 163 (288)
|+.||+|++|++.+++.+..+. .|...+..+.+++++++
T Consensus 85 gs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
T 4ggc_A 85 GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH 164 (318)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred EECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE
Confidence 9999999999999877655443 34556788889999999
Q ss_pred EEEecCCCeEEEEECCcccE----EEEeeccCCCeEEEEEcCCCCE-E--EEEeCCCeEEEEeCCCCceeEEEcCCCccc
Q 023018 164 VLAGSEDSTVWMWNADRAAY----LNMFSGHGSSVTCGDFTPDGKT-I--CTGSDDATLRVWNPKSGENIHVIRGHPYHT 236 (288)
Q Consensus 164 l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~p~~~~-l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 236 (288)
|++++.||.|++||+++++. ......+...|.++.++|.+.. + ++++.++.|++||........... +.
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~----~~ 240 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AH 240 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE----CS
T ss_pred EEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc----ce
Confidence 99999999999999987653 3445567889999999996553 3 356678999999999887766665 56
Q ss_pred cCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCcEEEEec----ceEEEEEeec
Q 023018 237 EGLTCLTISADSTLALSGS--KDGSVHMVNITTGKVCCLNF----QYTCVAYDLD 285 (288)
Q Consensus 237 ~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~t~~~~~~~~----~~~~~~~~~d 285 (288)
..+..+.|+|++..+++++ .||.|++||+.+++++..+. .+.+++|+|+
T Consensus 241 ~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd 295 (318)
T 4ggc_A 241 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 295 (318)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred eeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 7799999999988877654 79999999999999999984 4667777765
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-31 Score=220.85 Aligned_cols=204 Identities=17% Similarity=0.215 Sum_probs=172.5
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEE--ecCCCEEEEEeCCCeEEEEe
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAF--SMDGQLLASGGLDGLVQIWD 135 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~d 135 (288)
..+.+|..+|++++|+| ++.+|++++.||.|++|++.+++.+. +..|...|.+++| +|++.+|++++.||.|++||
T Consensus 80 ~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp EEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred EEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 78899999999999999 88899999999999999999988776 4559999999999 88999999999999999999
Q ss_pred CCCCceeEEeccCC-----------------------------------------CCEEEEEEcCCCCE----EEEecCC
Q 023018 136 PSSGNLKCTLEGPG-----------------------------------------GGVEWVSWHPRGHI----VLAGSED 170 (288)
Q Consensus 136 ~~~~~~~~~~~~~~-----------------------------------------~~i~~~~~~~~~~~----l~~~~~d 170 (288)
+.+++.+..+..+. ..+.++++.+.... +++++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (368)
T 3mmy_A 158 TRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE 237 (368)
T ss_dssp SSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT
T ss_pred CCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC
Confidence 99887766655432 22344444443332 9999999
Q ss_pred CeEEEEECCcc---cEEEEeeccCC------------CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCcc
Q 023018 171 STVWMWNADRA---AYLNMFSGHGS------------SVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYH 235 (288)
Q Consensus 171 g~i~i~d~~~~---~~~~~~~~~~~------------~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 235 (288)
|.|++|+++.. ..+..+..|.. +|++++|+|++++|++++.||.|++||+.+++.+..+.. |
T Consensus 238 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~ 314 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ---L 314 (368)
T ss_dssp SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC---C
T ss_pred CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC---C
Confidence 99999999876 55666776665 799999999999999999999999999999998888876 7
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 236 TEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 236 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
..+|.+++|+|++.+|++++.|+..+.|++.
T Consensus 315 ~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 315 DQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp SSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CCCceEEEECCCCCeEEEEeccccccccccc
Confidence 8899999999999999999998765555543
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8e-30 Score=216.56 Aligned_cols=227 Identities=21% Similarity=0.328 Sum_probs=179.1
Q ss_pred CCCCCeeEeecCC----CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec--cccCcEEEEEEecCCCEEEEE
Q 023018 52 QPDDSTHIFSGHS----DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSMDGQLLASG 125 (288)
Q Consensus 52 ~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~ 125 (288)
.+..|.++|.... -.+..|+|++ + ++||+|. |++|+|||..+++....+. +|...|++++|+|++++|++|
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~-~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasg 165 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVG 165 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEE
T ss_pred cCCCCceEEECCCCcccccceeEEECC-C-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEE
Confidence 3445555555432 1367799997 4 4777765 8999999999998777654 577889999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEeccC-----------------------------------------CCCEEEEEEcCCCCEE
Q 023018 126 GLDGLVQIWDPSSGNLKCTLEGP-----------------------------------------GGGVEWVSWHPRGHIV 164 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~-----------------------------------------~~~i~~~~~~~~~~~l 164 (288)
+.||.|+|||+.+++.+..+.+| ...+..+.|+|++.++
T Consensus 166 s~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCee
Confidence 99999999999887766555443 4456666777777788
Q ss_pred EEecCCCeEEEEECCccc----EEEEeeccCCCeEEEEEcCCC-CEEEEE--eCCCeEEEEeCCCCceeEEEcCCCcccc
Q 023018 165 LAGSEDSTVWMWNADRAA----YLNMFSGHGSSVTCGDFTPDG-KTICTG--SDDATLRVWNPKSGENIHVIRGHPYHTE 237 (288)
Q Consensus 165 ~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~p~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 237 (288)
++++.|+.+++|+..+++ .+.....|...|.+++|+|.+ ..++++ +.|+.|++||+.++.....+. ...
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----~~~ 321 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHS 321 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE----CSS
T ss_pred eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec----ccc
Confidence 888888888888876653 345566788999999999954 455554 479999999999999888887 446
Q ss_pred CeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCcEEEEec----ceEEEEEeec
Q 023018 238 GLTCLTISADSTLALSGS--KDGSVHMVNITTGKVCCLNF----QYTCVAYDLD 285 (288)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~t~~~~~~~~----~~~~~~~~~d 285 (288)
.+.++.|+|++..|++++ .||.|++||+.+++++..+. .+.+++|+||
T Consensus 322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd 375 (420)
T 4gga_A 322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 375 (420)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 789999999998888765 68999999999999999984 4677777776
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-31 Score=224.93 Aligned_cols=192 Identities=12% Similarity=0.130 Sum_probs=164.4
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccC-----cEEEEEEecCCCEEEEEeCCCeEEEEeC
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD-----SVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (288)
+|...|.+++|+| ++.+||+++.||.|++|+... .+..+. |.. .+.+++|+|+|++||+|+.||+|+||++
T Consensus 83 ~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 5588999999999 889999999999999999544 666666 665 4999999999999999999999999999
Q ss_pred CCCce-------eEEe----ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccE---EEEee-ccCCCeEEEEEcC
Q 023018 137 SSGNL-------KCTL----EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY---LNMFS-GHGSSVTCGDFTP 201 (288)
Q Consensus 137 ~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~-~~~~~i~~~~~~p 201 (288)
.+++. +..+ .+|...|.+++|+|+| +++++.|+.|++|++..+.. ..++. +|...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 98863 5665 5677899999999998 88889999999999988763 34563 688899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEE--cCCCCEEEEEeCCCcEEEEEcC
Q 023018 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTI--SADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
+++|++++ ++.|++||+.+++......+ |...+..+.| +|++..|++++.+|. ++|.+.
T Consensus 236 -g~~LASa~-~~tIkLWd~~~~~~~~~~~g---h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHKIDLKNYSISSLKTG---SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -TTEEEEEC-SSEEEEEETTTTEEEEEECS---CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred -CCEEEEEe-CCeEEEEECCCCeEEEEEcC---CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 68999887 69999999987766333334 7889999999 999999999999999 999875
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-32 Score=223.13 Aligned_cols=202 Identities=11% Similarity=0.064 Sum_probs=168.3
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCC---------CCceeEEec
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS---------SGNLKCTLE 146 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~---------~~~~~~~~~ 146 (288)
++.++++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 66789999999999999999998888776 456778888887 9999999999999665 455444444
Q ss_pred -cCCCCEEEEEEcC--CCCEEEEecCCCeEEEEECCcccEEEEeec-cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 023018 147 -GPGGGVEWVSWHP--RGHIVLAGSEDSTVWMWNADRAAYLNMFSG-HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (288)
Q Consensus 147 -~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~ 222 (288)
.|...|.+++|+| +++++++++.||.|++||+++++.+..... +...+++++|+|++.+|++|+.||.|++||+++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 5667899999999 999999999999999999999988766643 455899999999999999999999999999999
Q ss_pred Ccee-EEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc-------e--EEEEEeec
Q 023018 223 GENI-HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQ-------Y--TCVAYDLD 285 (288)
Q Consensus 223 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~-------~--~~~~~~~d 285 (288)
++.+ ..+.. .|..+|++++|+|++.+|++++ ++.|++||+++++.+..+.. + .+++|+|+
T Consensus 202 ~~~~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 202 PDQASSRFPV--DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp TTSCCEECCC--CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred CCCCccEEec--cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 9877 66654 2678999999999999999999 55999999999887654422 1 24777765
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-31 Score=225.39 Aligned_cols=211 Identities=14% Similarity=0.149 Sum_probs=166.8
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-----------------------------eeEeec-cccCcEE
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----------------------------WASEIQ-GHKDSVS 111 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------------------------~~~~~~-~~~~~i~ 111 (288)
.-...|.+++|+| +++++|+++.|++|+ +...++ ....+. .|...|.
T Consensus 13 ~~~~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 13 EFEDWKNNLTWAR-DGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp CCSSSSCCEEECT-TSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred HhhccEEEEEECC-CCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence 4456788999999 888999999998885 332221 111222 3578899
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCC-----CEEEEEEcCCCCEEEEecCCCeEEEEECCccc----
Q 023018 112 SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGG-----GVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA---- 182 (288)
Q Consensus 112 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---- 182 (288)
+++|+|+|.+||+++.||.|++|+... .+..+. |.. .+.+++|+|+|++|++|+.||+|++||+.++.
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 999999999999999999999999544 555566 554 49999999999999999999999999999875
Q ss_pred ---EEEEe----eccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eEEEcCCCccccCeEEEEEcCCCCEEE
Q 023018 183 ---YLNMF----SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN---IHVIRGHPYHTEGLTCLTISADSTLAL 252 (288)
Q Consensus 183 ---~~~~~----~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~ 252 (288)
.+.++ .+|...|.+++|+|+| +++++.|+.|++||+.++.. ...+... |...|.+++|+ ++.|+
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~--h~~~V~svaFs--g~~LA 240 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA--SRRKITDLKIV--DYKVV 240 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC--CSSCCCCEEEE--TTEEE
T ss_pred cceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccc--ccCcEEEEEEE--CCEEE
Confidence 35666 5677899999999998 88889999999999987763 2455322 66889999999 68888
Q ss_pred EEeCCCcEEEEEcCCCcEEEEe----cceEEEEE--eec
Q 023018 253 SGSKDGSVHMVNITTGKVCCLN----FQYTCVAY--DLD 285 (288)
Q Consensus 253 ~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~--~~d 285 (288)
+++ ++.|++||+.+++..... ..+..++| +|+
T Consensus 241 Sa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d 278 (588)
T 2j04_A 241 LTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE 278 (588)
T ss_dssp EEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS
T ss_pred EEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC
Confidence 887 699999999998884444 34555666 655
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.7e-31 Score=224.92 Aligned_cols=206 Identities=15% Similarity=0.113 Sum_probs=154.6
Q ss_pred eeEeecCCCCEEEEEEcC-------CCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCC-EEEEEeCC
Q 023018 57 THIFSGHSDEVYSVACSP-------TDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLD 128 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~-------~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d 128 (288)
...+.||.+.|++++|+| .++++||+|+.|++|+|||+.++..+..+..|..++.+++|+|++. +|++|+.|
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 345789999999999987 2578999999999999999999888888888999999999999875 79999999
Q ss_pred CeEEEEeCCCCceeEEe-------------------------ccCCCCEEEEEEc-CCCCEEEEecCCCeEEEEECCccc
Q 023018 129 GLVQIWDPSSGNLKCTL-------------------------EGPGGGVEWVSWH-PRGHIVLAGSEDSTVWMWNADRAA 182 (288)
Q Consensus 129 g~i~i~d~~~~~~~~~~-------------------------~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~ 182 (288)
|+|++||+.+++..... .+|...+.++.|+ |+++.|++++.|+++++||+..++
T Consensus 209 ~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 209 GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 99999999887543321 2456678888887 699999999999999999998876
Q ss_pred EEEEeeccCCCeEEE------------------EEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEE
Q 023018 183 YLNMFSGHGSSVTCG------------------DFTP--DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCL 242 (288)
Q Consensus 183 ~~~~~~~~~~~i~~~------------------~~~p--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 242 (288)
....+..|...+..+ .|+| ++.++++|+.||.|++||+.+++....+.. |..+|.++
T Consensus 289 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---~~~~V~sv 365 (393)
T 4gq1_A 289 DYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---LGMPIVDF 365 (393)
T ss_dssp ---------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE---CSSCEEEE
T ss_pred CCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC---CCCcEEEE
Confidence 665555444433333 2333 334567788899999999999988777665 67799999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 243 TISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 243 ~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
+|+|+|++|++++.+| +.+|.+.
T Consensus 366 afspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 366 CWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEcCCCCEEEEEeCCC-eEEEEEe
Confidence 9999999999998665 6666653
No 119
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.7e-31 Score=245.85 Aligned_cols=222 Identities=15% Similarity=0.202 Sum_probs=177.6
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeee----Ee--ec-----cccCcEEEEEEecCCCEEEEEeC
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA----SE--IQ-----GHKDSVSSLAFSMDGQLLASGGL 127 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~--~~-----~~~~~i~~~~~~~~~~~l~~~~~ 127 (288)
.+.+|...+..++|+| ++.+||+|+.||+|++||+.++... .. +. +|...|++++|+|++++||+|+.
T Consensus 430 ~l~G~~~~v~sv~~sp-dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAE-YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp SCCCSBCCCCCCCCCS-EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred cccCCcCCCCcccccc-cCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 4566777777777888 7889999999999999999876421 11 11 68899999999999999999999
Q ss_pred CCeEEEEeCCCCc---------------------------------------------eeEEeccCCCCEEEEEEcCCCC
Q 023018 128 DGLVQIWDPSSGN---------------------------------------------LKCTLEGPGGGVEWVSWHPRGH 162 (288)
Q Consensus 128 dg~i~i~d~~~~~---------------------------------------------~~~~~~~~~~~i~~~~~~~~~~ 162 (288)
||+|+||++.+++ ++..+.+|.+.|++++|+|+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence 9999999987662 356778899999999999999
Q ss_pred EEEEecCCCeEEEEECCcccEEE-----Eee-ccCCCeEEEEEc-----CCC---CEEEEEeCCCeEEEEeC---CCCce
Q 023018 163 IVLAGSEDSTVWMWNADRAAYLN-----MFS-GHGSSVTCGDFT-----PDG---KTICTGSDDATLRVWNP---KSGEN 225 (288)
Q Consensus 163 ~l~~~~~dg~i~i~d~~~~~~~~-----~~~-~~~~~i~~~~~~-----p~~---~~l~~~~~dg~i~i~d~---~~~~~ 225 (288)
+||+|+.|++|++||++++..+. .+. +|...|++++|+ ||| .+|++|+.|++|++||+ .+|+.
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCE
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcE
Confidence 99999999999999998876653 233 788899999999 885 89999999999999999 77877
Q ss_pred eEEEcCCCc--cccCeEEEE-Ec----------------------CCCCEEEEEeCCCcEEEEEcCCCcEEEEecceEEE
Q 023018 226 IHVIRGHPY--HTEGLTCLT-IS----------------------ADSTLALSGSKDGSVHMVNITTGKVCCLNFQYTCV 280 (288)
Q Consensus 226 ~~~~~~~~~--~~~~v~~~~-~~----------------------~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~~~~~ 280 (288)
...+.++.. +..+|..+. |+ +++.+|+++ +..|++|++.+++++++...+.+.
T Consensus 668 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~~~~~~ 745 (902)
T 2oaj_A 668 DVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKGFKYPLA 745 (902)
T ss_dssp EEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEECSSCEE
T ss_pred EEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeEccccee
Confidence 777765421 246676665 65 344444433 778999999999999887555555
Q ss_pred EEee
Q 023018 281 AYDL 284 (288)
Q Consensus 281 ~~~~ 284 (288)
..+.
T Consensus 746 ~~~v 749 (902)
T 2oaj_A 746 ATGL 749 (902)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 4443
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=7.6e-29 Score=208.28 Aligned_cols=224 Identities=17% Similarity=0.167 Sum_probs=187.2
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQ 132 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~ 132 (288)
.+....+.+|. .+.+++|+|++..++++++.++.|++||+.+++.+..+..+. .+.+++|+|++++|+++ +.++.|+
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLS 99 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEE
Confidence 34556677665 489999999444455788899999999999999988887554 89999999999987655 4679999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEE-EEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEE-EEEe
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CTGS 210 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~~~ 210 (288)
+||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++
T Consensus 100 v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 100 VIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp EEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEET
T ss_pred EEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeC
Confidence 9999999888887755 468999999999977 67888999999999999888888755 557999999999987 5677
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe---CCCcEEEEEcCCCcEEEEe---cceEEEEEee
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS---KDGSVHMVNITTGKVCCLN---FQYTCVAYDL 284 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~ 284 (288)
.++.|++||+++++....+. +...+.+++|+|++++|++++ .++.|++||+.+++++..+ ..+.+++|+|
T Consensus 178 ~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 253 (391)
T 1l0q_A 178 DSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTP 253 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECT
T ss_pred CCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEcc
Confidence 88999999999998877776 445789999999999998887 6899999999999988877 3456777876
Q ss_pred c
Q 023018 285 D 285 (288)
Q Consensus 285 d 285 (288)
+
T Consensus 254 d 254 (391)
T 1l0q_A 254 D 254 (391)
T ss_dssp T
T ss_pred C
Confidence 5
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=9.8e-29 Score=210.33 Aligned_cols=220 Identities=10% Similarity=0.046 Sum_probs=189.8
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCC
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPS 137 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~ 137 (288)
.+.+|...|.+++|+| ++.++++++.|+.|++|++.+++.+..+..|...+.+++|+|++++++++ +.++.|++||+.
T Consensus 164 ~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 164 KYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 4458899999999998 88899999999999999999999999998899999999999999987554 479999999999
Q ss_pred CCceeEEeccCCCCEEEEEEcCCCCEEEEec--------CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEE-EE
Q 023018 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS--------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CT 208 (288)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~ 208 (288)
+++.+..+..+ ..+.+++|+|+++.+++++ .||.|++||+++++.+..+. +...+.+++|+|+++.+ ++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEE
T ss_pred CCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEE
Confidence 99888877754 4599999999999999888 58899999999988776653 55688999999999765 56
Q ss_pred EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeC---------------CCcEEEEEcCCCcEEEE
Q 023018 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK---------------DGSVHMVNITTGKVCCL 273 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~t~~~~~~ 273 (288)
++.++.|++||+.+++....+. +...+.+++|+|++++|++++. ||.|++||+.+++.+..
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIP----VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEECCCCcEEEEec----CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 6889999999999988877776 4577899999999998888876 57999999999998887
Q ss_pred e---cceEEEEEeec
Q 023018 274 N---FQYTCVAYDLD 285 (288)
Q Consensus 274 ~---~~~~~~~~~~d 285 (288)
+ ..+.+++|+|+
T Consensus 397 ~~~~~~~~~~~~s~d 411 (433)
T 3bws_A 397 WEAGNQPTGLDVSPD 411 (433)
T ss_dssp EECSSSEEEEEECTT
T ss_pred ecCCCCCceEEEcCC
Confidence 7 45678888776
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=9.1e-29 Score=205.53 Aligned_cols=202 Identities=16% Similarity=0.180 Sum_probs=163.2
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCC--------------------------
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDG-------------------------- 119 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------------- 119 (288)
.+..+++.+....++++++.|++|++||+.+++.+..+. +...|.+++|+++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc
Confidence 577888888555555678888999999999999888887 66788888887642
Q ss_pred ---------CEEEE--EeCCCeEEEEeCCCCc----------------eeEEeccCCCCEEEEEEcCCCCEEEEecCCCe
Q 023018 120 ---------QLLAS--GGLDGLVQIWDPSSGN----------------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDST 172 (288)
Q Consensus 120 ---------~~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 172 (288)
.++++ |+.+|.|++||+.+++ .+..+.+|...|.+++|+|++++|++|+.||+
T Consensus 139 ~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 139 FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 23444 4678999999998765 26778899999999999999999999999998
Q ss_pred -EEEEECCcccEEEEee-c-cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eEEEcC----------------
Q 023018 173 -VWMWNADRAAYLNMFS-G-HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN--IHVIRG---------------- 231 (288)
Q Consensus 173 -i~i~d~~~~~~~~~~~-~-~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~---------------- 231 (288)
|++||+++++++..+. + |...|++++|+|++++|++++.|+.|++||++.+.. ...+..
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 9999999999999998 5 999999999999999999999999999999976531 111110
Q ss_pred --CCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 232 --HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 232 --~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
..........++|++++..|++++.||.+++|++..+
T Consensus 299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 1111223467899999999999999999999998753
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.2e-28 Score=209.78 Aligned_cols=223 Identities=13% Similarity=0.069 Sum_probs=190.3
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeE-----eeccccCcEEEEEEecCCCEEEEEeCCCe
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-----EIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (288)
.+..+..+. .+.+++|+| ++.++++++.++.|++||+.+++... .+.+|...|.+++|++++.++++++.++.
T Consensus 115 ~~~~~~~~~-~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 115 FISRFKTGF-QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp EEEEEECSS-CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred EEEEEcCCC-CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 444455444 456999999 88899999999999999999988776 44578889999999999999999999999
Q ss_pred EEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEE-EecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEE
Q 023018 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVL-AGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG 209 (288)
Q Consensus 131 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~ 209 (288)
|++||+.+++.+..+..+...+.+++|+|+++.++ +++.++.|++||+++++.+..+.. ...+.+++|+|++++|+++
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEE
Confidence 99999999999988888888999999999999775 555799999999999988887775 4568999999999999988
Q ss_pred e--------CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCcEEEEe---cce
Q 023018 210 S--------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITTGKVCCLN---FQY 277 (288)
Q Consensus 210 ~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~t~~~~~~~---~~~ 277 (288)
+ .||.|++||+.+++....+. +...+.+++|+|+++.| ++++.++.|++||+.+++++..+ ..+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 347 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTIG----PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKP 347 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEEE----EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeecc----CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCC
Confidence 8 48899999999988777664 55678999999999654 66688999999999999988776 457
Q ss_pred EEEEEeec
Q 023018 278 TCVAYDLD 285 (288)
Q Consensus 278 ~~~~~~~d 285 (288)
.+++|+|+
T Consensus 348 ~~~~~s~d 355 (433)
T 3bws_A 348 NTIALSPD 355 (433)
T ss_dssp EEEEECTT
T ss_pred CeEEEcCC
Confidence 78888876
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1e-28 Score=203.31 Aligned_cols=168 Identities=21% Similarity=0.378 Sum_probs=146.2
Q ss_pred EeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCC----ceeEEeccCCCCEEEEEEcC--CCCEEEEecCCCeEE
Q 023018 101 SEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG----NLKCTLEGPGGGVEWVSWHP--RGHIVLAGSEDSTVW 174 (288)
Q Consensus 101 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~ 174 (288)
..+.+|...|++++|+|++++|++|+.||.|++|++.++ +....+..|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999999999999999999999999876 45667788999999999999 599999999999999
Q ss_pred EEECCcc---------cEEEEeeccCCCeEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeE----------------
Q 023018 175 MWNADRA---------AYLNMFSGHGSSVTCGDFTPD--GKTICTGSDDATLRVWNPKSGENIH---------------- 227 (288)
Q Consensus 175 i~d~~~~---------~~~~~~~~~~~~i~~~~~~p~--~~~l~~~~~dg~i~i~d~~~~~~~~---------------- 227 (288)
+||++++ +.+..+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999876 567788889999999999999 9999999999999999987654211
Q ss_pred -----------------------------------------EEcCCCccccCeEEEEEcCCC----CEEEEEeCCCcEEE
Q 023018 228 -----------------------------------------VIRGHPYHTEGLTCLTISADS----TLALSGSKDGSVHM 262 (288)
Q Consensus 228 -----------------------------------------~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i 262 (288)
.+.....|...|++++|+|++ .+|++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 011122377889999999998 89999999999999
Q ss_pred EEcCCC
Q 023018 263 VNITTG 268 (288)
Q Consensus 263 wd~~t~ 268 (288)
||++++
T Consensus 245 wd~~~~ 250 (351)
T 3f3f_A 245 FKITEK 250 (351)
T ss_dssp EEEEEC
T ss_pred EeCCCC
Confidence 999876
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.7e-27 Score=200.04 Aligned_cols=213 Identities=14% Similarity=0.125 Sum_probs=178.8
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQ 132 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~ 132 (288)
.+.+..+..|. .+.+++|+|++..++++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|+
T Consensus 64 ~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 64 NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 34555665555 89999999944445566667899999999999988888744 578999999999977 6777899999
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEE-EEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS- 210 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~- 210 (288)
+||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++
T Consensus 142 ~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 142 VINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEec
Confidence 9999999988888765 457999999999877 577888999999999998877776 566889999999999999888
Q ss_pred --CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCcEEEEe
Q 023018 211 --DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 211 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.++.|++||+.+++.+..+.. ...+.+++|+|++++| ++++.|+.|++||+.+++++..+
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEEEC----CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcCCCcEEEEECCCCeEEEEEec----CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 689999999999988888775 2357899999999877 56688999999999999998876
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.5e-27 Score=199.26 Aligned_cols=221 Identities=18% Similarity=0.170 Sum_probs=176.4
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCC---eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEE-EEeCCC
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDD---KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDG 129 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg 129 (288)
....+.+.+|...|.+++|+| +++.|++++.++ .|++||+.+++.. .+..|...+.+++|+|+|++|+ +++.++
T Consensus 168 g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 168 GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence 345678888999999999999 777888888775 9999999988765 4566888999999999999887 666555
Q ss_pred --eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecC-CC--eEEEEECCcccEEEEeeccCCCeEEEEEcCCCC
Q 023018 130 --LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-DS--TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 130 --~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
.|++||+.+++. ..+..+...+.+++|+|+|+.|++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|+
T Consensus 246 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 246 SLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp SCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSS
T ss_pred CceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCC
Confidence 499999988775 556667788999999999998888876 44 688889988763 44555677889999999999
Q ss_pred EEEEEeCC---CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC---cEEEEEcCCCcEEEEe----
Q 023018 205 TICTGSDD---ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG---SVHMVNITTGKVCCLN---- 274 (288)
Q Consensus 205 ~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~t~~~~~~~---- 274 (288)
+|++++.+ ..|++||+.+++.. .+.. + ..+.+++|+|+|++|++++.++ .|++||+.++. ...+
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~---~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-~~~l~~~~ 397 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQ-VLSS---T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARLPATD 397 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEE-ECCC---S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-EEECCCSS
T ss_pred EEEEEECcCCceEEEEEECCCCCEE-EecC---C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-EEEeeCCC
Confidence 99888764 58999999988763 4443 3 2789999999999999888776 79999998554 4445
Q ss_pred cceEEEEEee
Q 023018 275 FQYTCVAYDL 284 (288)
Q Consensus 275 ~~~~~~~~~~ 284 (288)
..+..++|+|
T Consensus 398 ~~v~~~~~~~ 407 (415)
T 2hqs_A 398 GQVKFPAWSP 407 (415)
T ss_dssp SEEEEEEECC
T ss_pred CCCcCCcccc
Confidence 3456666665
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.2e-26 Score=186.98 Aligned_cols=228 Identities=16% Similarity=0.121 Sum_probs=163.7
Q ss_pred CCeeEeecCCC----CEEEEEEcCCCC--cEEEEEeCCCeEEEEEccCC---eeeEeeccccC-----------------
Q 023018 55 DSTHIFSGHSD----EVYSVACSPTDA--TLVATGGGDDKGFFWRINQG---DWASEIQGHKD----------------- 108 (288)
Q Consensus 55 ~~~~~~~~h~~----~v~~~~~~~~~~--~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~----------------- 108 (288)
+.+..++...+ .+.++.|-..+. ..+++++. ..|++|+..++ +.++++..|..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 104 (356)
T 2w18_A 26 QLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCV 104 (356)
T ss_dssp EEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEE
T ss_pred eeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeee
Confidence 44555555544 355666655222 25666665 78999999988 77777766654
Q ss_pred --------cEEEEEEecC----CCEEEEEeC--------------------CCeEEEEeC-CCCceeEEeccCCCCEEEE
Q 023018 109 --------SVSSLAFSMD----GQLLASGGL--------------------DGLVQIWDP-SSGNLKCTLEGPGGGVEWV 155 (288)
Q Consensus 109 --------~i~~~~~~~~----~~~l~~~~~--------------------dg~i~i~d~-~~~~~~~~~~~~~~~i~~~ 155 (288)
.|.+++++|+ ++++++++. |+.|++|++ .+++.+..+..|...++.+
T Consensus 105 ~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 105 ALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL 184 (356)
T ss_dssp EECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEE
T ss_pred eeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeE
Confidence 4566777778 667776553 788888888 4477777777777788888
Q ss_pred EEcC---CCCEEEEecCCCeEEEEECCcccEEEEeeccCC---CeEEEEEcCCCCEE------------EEEeCCCeEEE
Q 023018 156 SWHP---RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS---SVTCGDFTPDGKTI------------CTGSDDATLRV 217 (288)
Q Consensus 156 ~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~p~~~~l------------~~~~~dg~i~i 217 (288)
+|++ ++..|++++.|++|+|||++++++++++.+|.. .+.+++|+|+|.++ ++|+.|++|++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 8888 668999999999999999999999999986543 57788999999876 56788999999
Q ss_pred EeCCCCceeEEEcC--CCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecce-----EEEEEeec
Q 023018 218 WNPKSGENIHVIRG--HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQY-----TCVAYDLD 285 (288)
Q Consensus 218 ~d~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~~-----~~~~~~~d 285 (288)
||..+++.+..+.. ...|...+.+..+ ++.++++++.||+|+|||+.+|+++.++.++ ..++|+||
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSS
T ss_pred EECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCC
Confidence 99999987765521 1124444444444 3789999999999999999999999998533 35789987
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=5.1e-26 Score=192.75 Aligned_cols=221 Identities=14% Similarity=0.091 Sum_probs=171.1
Q ss_pred eEeecCCCCEEEEEEcCC-------------CCcEEEEEeCC------CeEEEEEccCCeeeEeeccccCcEEEEEEecC
Q 023018 58 HIFSGHSDEVYSVACSPT-------------DATLVATGGGD------DKGFFWRINQGDWASEIQGHKDSVSSLAFSMD 118 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~-------------~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~ 118 (288)
..+.+|...+..+++++. .+..++.++.+ +.|++||+.. .....+..|...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 447777777777766541 03344444443 7999999974 456677779999999999999
Q ss_pred CCEEEEEeCCC---eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEE-EecCCC--eEEEEECCcccEEEEeeccCC
Q 023018 119 GQLLASGGLDG---LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVL-AGSEDS--TVWMWNADRAAYLNMFSGHGS 192 (288)
Q Consensus 119 ~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~ 192 (288)
+++|++++.++ .|++||+.+++.. .+..+...+.+++|+|+|+.|+ +++.++ .|++||+.+++. ..+..|..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC
Confidence 99999998875 9999999988765 4556777899999999999887 566555 499999988775 56667888
Q ss_pred CeEEEEEcCCCCEEEEEeC-CC--eEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC---CcEEEEEcC
Q 023018 193 SVTCGDFTPDGKTICTGSD-DA--TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD---GSVHMVNIT 266 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~ 266 (288)
.+.+++|+|+|++|++++. ++ .|++||+.+++.. .+.. +...+.+++|+|+|++|++++.+ +.|++||+.
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~---~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITW---EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCC---SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEec---CCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 9999999999999988876 44 6888899877643 3333 45678899999999999887764 589999999
Q ss_pred CCcEEEEe--cceEEEEEeec
Q 023018 267 TGKVCCLN--FQYTCVAYDLD 285 (288)
Q Consensus 267 t~~~~~~~--~~~~~~~~~~d 285 (288)
+++..... ..+..++|+|+
T Consensus 344 ~~~~~~l~~~~~~~~~~~spd 364 (415)
T 2hqs_A 344 TGGVQVLSSTFLDETPSLAPN 364 (415)
T ss_dssp TCCEEECCCSSSCEEEEECTT
T ss_pred CCCEEEecCCCCcCCeEEcCC
Confidence 99875433 34667777775
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=3.5e-26 Score=194.59 Aligned_cols=200 Identities=20% Similarity=0.223 Sum_probs=158.0
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe----------ee------EeeccccCcEEEEEEecCCCEEE----E
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGD----------WA------SEIQGHKDSVSSLAFSMDGQLLA----S 124 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----------~~------~~~~~~~~~i~~~~~~~~~~~l~----~ 124 (288)
..+..+++++ ...++++++.++ +++|+..... .+ ..+ .+...|++++|+|++++|+ +
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence 4578899999 667888888887 8888764210 01 112 2566799999999999999 7
Q ss_pred EeCCCeEEEEeCCCC--------ce---eEEeccCCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEeeccCC
Q 023018 125 GGLDGLVQIWDPSSG--------NL---KCTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS 192 (288)
Q Consensus 125 ~~~dg~i~i~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 192 (288)
|+.|+.|+|||+.++ +. ...+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+.....|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 788999999998654 22 3445668889999999997 78999999999999999999877766777889
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCc----cccCeEEEEEcCCCCEEEEE-eCCC------cEE
Q 023018 193 SVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY----HTEGLTCLTISADSTLALSG-SKDG------SVH 261 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~-~~dg------~i~ 261 (288)
.|++++|+|+|++|++|+.||.|++||++ ++....+..+.. |...+.++.|++++.++++. +.+| .++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 99999999999999999999999999998 666666654321 23479999999988777543 3443 389
Q ss_pred EEEcCCC
Q 023018 262 MVNITTG 268 (288)
Q Consensus 262 iwd~~t~ 268 (288)
+|++++.
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999865
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5e-25 Score=177.26 Aligned_cols=224 Identities=16% Similarity=0.202 Sum_probs=168.0
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC-CeeeEeeccc-cCcEEEEEEecCCCEEEEEe--CCC-
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-GDWASEIQGH-KDSVSSLAFSMDGQLLASGG--LDG- 129 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~--~dg- 129 (288)
.....+..|...|.+++|+| ++.+|++++ ++.|++|++.+ ++.......+ ...+.+++|+|++++|++++ .++
T Consensus 32 ~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 32 RKMRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp TEEEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred CceeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 33456677899999999999 777887776 78999999998 8777666555 36788999999999999998 334
Q ss_pred -eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEE-EecCCCeEEEEECCc-ccEEEEeeccCCCeEEEEEcCCCCEE
Q 023018 130 -LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVL-AGSEDSTVWMWNADR-AAYLNMFSGHGSSVTCGDFTPDGKTI 206 (288)
Q Consensus 130 -~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~p~~~~l 206 (288)
.|.+|++.+++ ...+..+ ..+..++|+|+++.|+ ++..++.+.+|++.. ......+..+...+.+++|+|++++|
T Consensus 110 ~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp CEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred ceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 45555555554 3344433 3489999999999877 677889899998532 23345566677889999999999988
Q ss_pred EEEe-CCCeEEEEeCC-CCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----------CcEEEEEcCCCcEEEE
Q 023018 207 CTGS-DDATLRVWNPK-SGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----------GSVHMVNITTGKVCCL 273 (288)
Q Consensus 207 ~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~t~~~~~~ 273 (288)
++++ .++.+++|++. .+.....+.. +...+..++|+|++++|++++.+ +.|++||+.+++....
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITD---SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCC---CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEec---CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 8766 58889999875 4455555554 55678899999999999888765 5699999999876443
Q ss_pred e------cceEEEEEeec
Q 023018 274 N------FQYTCVAYDLD 285 (288)
Q Consensus 274 ~------~~~~~~~~~~d 285 (288)
. ..+..++|+|+
T Consensus 265 ~~~~~~~~~~~~~~~spd 282 (297)
T 2ojh_A 265 FDLFGGQGTMNSPNWSPD 282 (297)
T ss_dssp EEEEESTTTSCSCCBCTT
T ss_pred eccCCCCcccccceECCC
Confidence 3 24556666665
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.7e-23 Score=173.00 Aligned_cols=225 Identities=11% Similarity=0.078 Sum_probs=180.2
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccC---------cEEEEEEecCCCEEEEE
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---------SVSSLAFSMDGQLLASG 125 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~ 125 (288)
+....+.. ...+..++|+|++..+++++..++.|.+||..+++.+..+..+.. .+.+++|+|++++++++
T Consensus 80 ~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 158 (353)
T 3vgz_A 80 EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYIS 158 (353)
T ss_dssp CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEE
T ss_pred eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEE
Confidence 34444443 334778999995555666777789999999999988887765432 26889999999987777
Q ss_pred e--CCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeec----cCCCeEEEEE
Q 023018 126 G--LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG----HGSSVTCGDF 199 (288)
Q Consensus 126 ~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~ 199 (288)
+ .++.|.+||+.+++....+..+...+..++|+|+++++++++.++.|.+||+.+++.+..+.. +...+..++|
T Consensus 159 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 159 GIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred ecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 6 478999999999998888875555688999999999999999999999999999988877764 4556788999
Q ss_pred cCCCCEEEEEeC-CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEEe---
Q 023018 200 TPDGKTICTGSD-DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVCCLN--- 274 (288)
Q Consensus 200 ~p~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t~~~~~~~--- 274 (288)
+|++++|++++. ++.|.+||+.+++.+..+... . ...++|+|++++|++++ .++.|.+||+.+++.+..+
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 313 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP----E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP 313 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS----S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC----C-CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC
Confidence 999998877765 489999999999888777642 1 24689999998666555 6899999999999988876
Q ss_pred cceEEEEEeec
Q 023018 275 FQYTCVAYDLD 285 (288)
Q Consensus 275 ~~~~~~~~~~d 285 (288)
....+++|+|+
T Consensus 314 ~~~~~~~~s~d 324 (353)
T 3vgz_A 314 THPNSLALSAD 324 (353)
T ss_dssp SEEEEEEECTT
T ss_pred CCCCeEEEcCC
Confidence 45677888776
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=5e-23 Score=170.20 Aligned_cols=221 Identities=12% Similarity=0.099 Sum_probs=176.6
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeC-------CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEE
Q 023018 63 HSDEVYSVACSPTDATLVATGGG-------DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIW 134 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~ 134 (288)
....+..++|+| ++..+++++. ++.|.+||..+++.+..+.. ...+..++|+|++++++++ ..++.|.+|
T Consensus 39 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 345688999999 5555555553 56899999999988888764 3456789999999965554 557999999
Q ss_pred eCCCCceeEEeccCCCC---------EEEEEEcCCCCEEEEec--CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCC
Q 023018 135 DPSSGNLKCTLEGPGGG---------VEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~ 203 (288)
|+.+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+..++|+|++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 99999988877754322 78899999999877776 47899999999999888887566668899999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCC-ccccCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCcEEEEe--cceEE
Q 023018 204 KTICTGSDDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSK-DGSVHMVNITTGKVCCLN--FQYTC 279 (288)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~t~~~~~~~--~~~~~ 279 (288)
++|++++.++.|.+||+.+++....+.... .+...+..++|+|++++|++++. ++.|++||+.+++.+..+ .....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 276 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA 276 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCce
Confidence 999999999999999999998877776422 13456788999999997776655 599999999999988776 33456
Q ss_pred EEEeec
Q 023018 280 VAYDLD 285 (288)
Q Consensus 280 ~~~~~d 285 (288)
++|+|+
T Consensus 277 ~~~s~d 282 (353)
T 3vgz_A 277 VLFNPA 282 (353)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 777766
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=4.2e-23 Score=169.40 Aligned_cols=200 Identities=13% Similarity=0.094 Sum_probs=161.5
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc-c----cCcEEEEEEecCCCEEEEEe------------CC
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-H----KDSVSSLAFSMDGQLLASGG------------LD 128 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~----~~~i~~~~~~~~~~~l~~~~------------~d 128 (288)
.+..++|+|++..+++++..++.|.+||+.+++.+..+.. + ...+.+++|+|++++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4788999995445667777789999999999888776653 1 12567899999999888886 57
Q ss_pred CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-----------------
Q 023018 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG----------------- 191 (288)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------- 191 (288)
+.|.+||+.+++....+.. ...+.+++|+|++++|+++ ++.|++||+.+++.+..+..+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 9999999999888777765 3457889999999988887 5889999998776654433211
Q ss_pred -------------------------------------------------CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q 023018 192 -------------------------------------------------SSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (288)
Q Consensus 192 -------------------------------------------------~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~ 222 (288)
..+..++|+|++++|+++ ++.|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 234568999999999888 68999999999
Q ss_pred CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 223 GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
++.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+..+
T Consensus 270 ~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 270 NASIKRVPL----PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp TEEEEEEEC----SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred CcCcceecC----CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 888777763 345788999999999999989999999999999988876
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=6.1e-24 Score=192.59 Aligned_cols=217 Identities=15% Similarity=0.137 Sum_probs=171.0
Q ss_pred CCCEEEEEEcCCCCcEEEEEeC-CC-----eEEEEEccCCeeeEeeccccC------------------------cEEEE
Q 023018 64 SDEVYSVACSPTDATLVATGGG-DD-----KGFFWRINQGDWASEIQGHKD------------------------SVSSL 113 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~------------------------~i~~~ 113 (288)
...+.+++|+| ++++|++++. ++ .|++|++.+++....+..+.. .+.++
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 45699999999 7888888887 88 899999999887766654433 27899
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCCc--eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC
Q 023018 114 AFSMDGQLLASGGLDGLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG 191 (288)
Q Consensus 114 ~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 191 (288)
+|+|+|++|++++. +.|++||+.++. ....+..+...+..++|+|+|++|++++. +.|++||+.+++.......+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 99999999999886 999999999873 34456667778999999999999999875 699999999887665544333
Q ss_pred CC----------------eEEEEEcCCCCEEEEEeCCC---------------------------------eEEEEeCCC
Q 023018 192 SS----------------VTCGDFTPDGKTICTGSDDA---------------------------------TLRVWNPKS 222 (288)
Q Consensus 192 ~~----------------i~~~~~~p~~~~l~~~~~dg---------------------------------~i~i~d~~~ 222 (288)
.. +..++|+|+|++|++++.++ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 47799999999999987765 789999988
Q ss_pred -CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeC-----CCcEEEEEcCCCcEEEEecc--------eEEEEEeec
Q 023018 223 -GENIHVIRGHPYHTEGLTCLTISADSTLALSGSK-----DGSVHMVNITTGKVCCLNFQ--------YTCVAYDLD 285 (288)
Q Consensus 223 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~t~~~~~~~~~--------~~~~~~~~d 285 (288)
++....... ..+...+..++| |+|+.|++++. +..|++||+.++++...+.. +..++|+||
T Consensus 273 ~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 273 QAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp TCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred CCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 765443322 125677899999 99999887654 56899999999998776632 246777776
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.8e-22 Score=175.03 Aligned_cols=228 Identities=11% Similarity=0.056 Sum_probs=176.5
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEc--cCCeeeEeeccccCcEEEEEEec----CCCEEEEEe
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRI--NQGDWASEIQGHKDSVSSLAFSM----DGQLLASGG 126 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~--~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~ 126 (288)
..+.+..+..+.. +.+++|+| ++++|++++.++.|++||+ .+++.+..+. +......++|+| +++++++++
T Consensus 168 t~~~~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~ 244 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGA 244 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEE
T ss_pred CceEEEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEE
Confidence 3456677773333 89999999 8889999999999999999 8888888887 455679999999 999999887
Q ss_pred -CCCeEEEEeCCCCceeEEeccC-----------CCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEE--EeeccC
Q 023018 127 -LDGLVQIWDPSSGNLKCTLEGP-----------GGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLN--MFSGHG 191 (288)
Q Consensus 127 -~dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~ 191 (288)
.+++|.+||..+++.+..+..+ ...+..+.++|++. ++++...++.|.+||+.+.+.+. .+. +.
T Consensus 245 ~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~ 323 (543)
T 1nir_A 245 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AA 323 (543)
T ss_dssp EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CC
T ss_pred ccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cC
Confidence 4899999999999988887642 23689999999766 55666778999999998765433 333 56
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeEEEcCCC-ccccCeEEEEEcCC-CCEEEEEe-CCCcEEEEEcCC
Q 023018 192 SSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISAD-STLALSGS-KDGSVHMVNITT 267 (288)
Q Consensus 192 ~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~-~dg~i~iwd~~t 267 (288)
..+..+.|+|++++|++++ .+++|.+||+.+++.+..+.... .|......+ ++|+ +.+++++. .|++|.+|++.+
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 6788999999999877655 58899999999999888776421 233333333 4676 66666765 589999999999
Q ss_pred -------CcEEEEecc----eEEEEEeec
Q 023018 268 -------GKVCCLNFQ----YTCVAYDLD 285 (288)
Q Consensus 268 -------~~~~~~~~~----~~~~~~~~d 285 (288)
++++.++.. ...+.|+|+
T Consensus 403 ~~~~~~~~~~v~~l~~~g~~~~~v~~~pd 431 (543)
T 1nir_A 403 KNHPQYAWKKVAELQGQGGGSLFIKTHPK 431 (543)
T ss_dssp TTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred CCCchhcCeEEEEEEcCCCCceEEEcCCC
Confidence 899888833 345666665
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2e-22 Score=165.34 Aligned_cols=211 Identities=15% Similarity=0.110 Sum_probs=160.5
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCee-eEeeccccCcEEEEEEecCCCEEEEEeCCC---
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLASGGLDG--- 129 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--- 129 (288)
.+....+..+...+ +++|+|++..+++++..++.|.+||+.+++. ...+..+..+..+++|+|++++|+++..++
T Consensus 30 ~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 108 (331)
T 3u4y_A 30 LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPF 108 (331)
T ss_dssp CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSC
T ss_pred cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcc
Confidence 34455666666667 9999994444555555589999999999887 667776666666599999999988555553
Q ss_pred eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEe-cCCCe-EEEEECCcccEE----EEeeccCCCeEEEEEcCCC
Q 023018 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDST-VWMWNADRAAYL----NMFSGHGSSVTCGDFTPDG 203 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-i~i~d~~~~~~~----~~~~~~~~~i~~~~~~p~~ 203 (288)
.|.+||+.+++.+..+..+ ....+++|+|++++++++ ..++. |.+|++.....+ .........+..++|+|+|
T Consensus 109 ~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg 187 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG 187 (331)
T ss_dssp EEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS
T ss_pred cEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC
Confidence 8999999999888877654 457999999999855554 55578 999998753322 1222345568999999999
Q ss_pred CEEEEEe-CCCeEEEEeCCCCce---eEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcE
Q 023018 204 KTICTGS-DDATLRVWNPKSGEN---IHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKV 270 (288)
Q Consensus 204 ~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t~~~ 270 (288)
++|++++ .++.|++||+.+++. +..+.. ...+..++|+|+|++|++++ .++.|.+||+.+++.
T Consensus 188 ~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 188 NFAFVANLIGNSIGILETQNPENITLLNAVGT----NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcccceeeeccC----CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 9766555 688999999998887 666663 35677899999999776654 478899999999987
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1.3e-22 Score=166.43 Aligned_cols=213 Identities=8% Similarity=0.004 Sum_probs=161.7
Q ss_pred EEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeC-CCeEEEEeCCCCce-eEEeccC
Q 023018 71 ACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL-DGLVQIWDPSSGNL-KCTLEGP 148 (288)
Q Consensus 71 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~-~~~~~~~ 148 (288)
.|.+....++++++.++.|.+||+.+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4556567778889999999999999999888877666667 9999999997766665 88999999999987 6666666
Q ss_pred CCCEEEEEEcCCCCEEEEecCCC---eEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEE-eCCCe-EEEEeCCCC
Q 023018 149 GGGVEWVSWHPRGHIVLAGSEDS---TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDAT-LRVWNPKSG 223 (288)
Q Consensus 149 ~~~i~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~-~~dg~-i~i~d~~~~ 223 (288)
..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. ...+..++|+|+|++|+++ ..++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 66555599999999999666553 899999999988887764 4456899999999866555 55578 999998754
Q ss_pred ceeEEEc-CCCccccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcE---EEEe---cceEEEEEeec
Q 023018 224 ENIHVIR-GHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKV---CCLN---FQYTCVAYDLD 285 (288)
Q Consensus 224 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~~~---~~~~---~~~~~~~~~~d 285 (288)
..+.... ........+..++|+|+|++|+++ ..++.|++||+.+++. +..+ ..+..++|+||
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd 231 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD 231 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCC
Confidence 3321110 000134567899999999866554 4689999999999998 6655 44567788776
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.5e-22 Score=166.47 Aligned_cols=222 Identities=15% Similarity=0.214 Sum_probs=157.7
Q ss_pred ecCCCCEEEEEEcCCCCcEEEEEeCC-CeEEEEEcc--CCe--eeEeeccccCcEEEEEEecCCCEEEEEeC-CCeEEEE
Q 023018 61 SGHSDEVYSVACSPTDATLVATGGGD-DKGFFWRIN--QGD--WASEIQGHKDSVSSLAFSMDGQLLASGGL-DGLVQIW 134 (288)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~d-g~i~iw~~~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~ 134 (288)
..|...+.+++|+| ++.+|++++.+ +.|.+|++. +++ .+..+..+. .+..++|+|++++|++++. ++.|.+|
T Consensus 34 ~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp EECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 34677899999999 66666666665 999999997 444 334454333 7789999999998876664 8899999
Q ss_pred eCC---CCceeEEeccCCCCEEEEEEcCCCCEEEEec-CCCeEEEEECCc-ccEEE----Eeec-cCCCeEEEEEcCCCC
Q 023018 135 DPS---SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADR-AAYLN----MFSG-HGSSVTCGDFTPDGK 204 (288)
Q Consensus 135 d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~----~~~~-~~~~i~~~~~~p~~~ 204 (288)
++. ..+....+..+ ..+.+++|+|+++++++++ .++.|++||+.+ ++... .+.. ....+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 33444444433 4588999999999888777 889999999987 54432 2222 345788999999999
Q ss_pred EEEEEe-CCCeEEEEeCCC--Cce--eEEEcCCC---ccccCeEEEEEcCCCCEEEE-EeCCCcEEEEEcC--CC--cEE
Q 023018 205 TICTGS-DDATLRVWNPKS--GEN--IHVIRGHP---YHTEGLTCLTISADSTLALS-GSKDGSVHMVNIT--TG--KVC 271 (288)
Q Consensus 205 ~l~~~~-~dg~i~i~d~~~--~~~--~~~~~~~~---~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~--t~--~~~ 271 (288)
+|++++ .++.|.+|++.. +.. ...+.... .....+..++|+|++++|++ +..++.|++|++. ++ +.+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 876655 789999999953 432 22232111 11345678999999988774 4578999999998 33 333
Q ss_pred EEe---cceEEEEEeec
Q 023018 272 CLN---FQYTCVAYDLD 285 (288)
Q Consensus 272 ~~~---~~~~~~~~~~d 285 (288)
..+ ..+..++|+|+
T Consensus 271 ~~~~~~~~~~~~~~s~d 287 (343)
T 1ri6_A 271 GFQPTETQPRGFNVDHS 287 (343)
T ss_dssp EEEECSSSCCCEEECTT
T ss_pred eeecCCCccceEEECCC
Confidence 333 33567777765
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=1.2e-22 Score=177.32 Aligned_cols=196 Identities=12% Similarity=0.044 Sum_probs=164.5
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeC--CCCceeEEeccCC
Q 023018 72 CSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP--SSGNLKCTLEGPG 149 (288)
Q Consensus 72 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~ 149 (288)
++| ++.++++++.+++|.+||..+++.+.++..+.. +..++|+|++++|++++.++.|++||+ .+++.+..+.. .
T Consensus 145 ~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 145 LDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred cCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 778 678899999999999999999999998874333 889999999999999999999999999 88888888874 4
Q ss_pred CCEEEEEEcC----CCCEEEEecC-CCeEEEEECCcccEEEEeecc-----------CCCeEEEEEcCCCCE-EEEEeCC
Q 023018 150 GGVEWVSWHP----RGHIVLAGSE-DSTVWMWNADRAAYLNMFSGH-----------GSSVTCGDFTPDGKT-ICTGSDD 212 (288)
Q Consensus 150 ~~i~~~~~~~----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~p~~~~-l~~~~~d 212 (288)
..+..++|+| +|+++++++. +++|.+||..+++++..+..+ ...+..+.++|++.. +++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 5689999999 9999999884 899999999999988887642 236889999997665 5566678
Q ss_pred CeEEEEeCCCCceeE--EEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEEe
Q 023018 213 ATLRVWNPKSGENIH--VIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 213 g~i~i~d~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t~~~~~~~ 274 (288)
+.|.+||+.+.+.+. .+. +...+..+.|+|+|++|++++ .+++|.+||+.+++++..+
T Consensus 302 g~i~vvd~~~~~~l~~~~i~----~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIG----AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEE----CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred CeEEEEEecCCCcceeEEec----cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 999999998766544 333 345678899999999776554 5889999999999998877
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=7.4e-23 Score=174.13 Aligned_cols=203 Identities=12% Similarity=0.065 Sum_probs=149.2
Q ss_pred cCCCCEEEEEEcCCCCcEEE----EEeCCCeEEEEEccCC--------e---eeEeeccccCcEEEEEEecC-CCEEEEE
Q 023018 62 GHSDEVYSVACSPTDATLVA----TGGGDDKGFFWRINQG--------D---WASEIQGHKDSVSSLAFSMD-GQLLASG 125 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~----~~~~dg~i~iw~~~~~--------~---~~~~~~~~~~~i~~~~~~~~-~~~l~~~ 125 (288)
.|...|++++|+| ++.+|| +|+.|+.|+|||+.+. + ....+.+|...|.+++|+|+ +.+|+++
T Consensus 90 ~~~~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 90 PMKFPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp CCSSCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred cCCCcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 3567899999999 677777 7889999999998754 1 24556679999999999998 7899999
Q ss_pred eCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeecc-------CCCeEEEE
Q 023018 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH-------GSSVTCGD 198 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~~~ 198 (288)
+.||+|++||++++........|...+.+++|+|+|++|++|+.||.|++||++ ++....+..+ ...+.+++
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 999999999999987766666788899999999999999999999999999998 5555555433 23789999
Q ss_pred EcCCCCEEEE-EeCCC------eEEEEeCCCCc-----eeEEEcCCC----ccccCeEEEEEcCCCCEEEEEe-CCCcEE
Q 023018 199 FTPDGKTICT-GSDDA------TLRVWNPKSGE-----NIHVIRGHP----YHTEGLTCLTISADSTLALSGS-KDGSVH 261 (288)
Q Consensus 199 ~~p~~~~l~~-~~~dg------~i~i~d~~~~~-----~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~dg~i~ 261 (288)
|++++.++++ ++.+| .+++|+++... ....+.... ....+-..+.+-++.+++++++ ..+.|.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~ 327 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVS 327 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCE
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCcee
Confidence 9998877754 33443 38999998642 112221110 1112222333446666666554 455677
Q ss_pred EEEcC
Q 023018 262 MVNIT 266 (288)
Q Consensus 262 iwd~~ 266 (288)
++...
T Consensus 328 vl~~~ 332 (434)
T 2oit_A 328 ILARQ 332 (434)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77654
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=4.9e-24 Score=192.66 Aligned_cols=216 Identities=13% Similarity=0.138 Sum_probs=166.8
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccC---cEEEEEEecCCCEEEEEeCC---------CeEEE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGGLD---------GLVQI 133 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~d---------g~i~i 133 (288)
.+.+++|+| +++++++ +.||.|++|++.+++....+..|.. .|.+++|+|+|++|++++.+ +.|.+
T Consensus 18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 467889999 6667665 7899999999999988877776654 48999999999999998764 78899
Q ss_pred EeCCCCceeEEec---cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCe----------------
Q 023018 134 WDPSSGNLKCTLE---GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV---------------- 194 (288)
Q Consensus 134 ~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i---------------- 194 (288)
||+.+++. ..+. .+...+..++|+|+|+.|++++. +.|++|++.+++.......+...+
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99998876 3333 23334888999999999999887 899999999887666555443333
Q ss_pred --EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeCCCCceeEEEcCCC---cc
Q 023018 195 --TCGDFTPDGKTICTGSDDA----------------------------------TLRVWNPKSGENIHVIRGHP---YH 235 (288)
Q Consensus 195 --~~~~~~p~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~~~~~~~~---~~ 235 (288)
.+++|+|+|++|++++.++ .|++||+.+++....+..+. .+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 7899999999999887543 79999998887655555321 12
Q ss_pred ccCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCcEEEEecc-----e----EEEEEeec
Q 023018 236 TEGLTCLTISADSTLALSGSK----DGSVHMVNITTGKVCCLNFQ-----Y----TCVAYDLD 285 (288)
Q Consensus 236 ~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~t~~~~~~~~~-----~----~~~~~~~d 285 (288)
...+..++|+|||++|++... +..|++||+.++++...+.. + ..++|+||
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC
Confidence 456889999999998876643 35799999999987766522 1 36777775
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=1.1e-21 Score=161.41 Aligned_cols=221 Identities=12% Similarity=0.136 Sum_probs=153.8
Q ss_pred eEeecCCCCEEEEEEcCCCCcEE-EEEeCCCeEEEEEcc---CCeeeEeeccccCcEEEEEEecCCCEEEEEe-CCCeEE
Q 023018 58 HIFSGHSDEVYSVACSPTDATLV-ATGGGDDKGFFWRIN---QGDWASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQ 132 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~ 132 (288)
..+..+. .+..++|+| ++.++ +++..++.|.+|++. ..+....+.. ...+.+++|+|++++|++++ .++.|+
T Consensus 78 ~~~~~~~-~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 78 AESALPG-SLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEEECSS-CCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred cccccCC-CCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEE
Confidence 3444444 788999999 55555 455558999999994 3444455543 34578999999999888877 899999
Q ss_pred EEeCCC-CceeE----Eecc-CCCCEEEEEEcCCCCEEEEe-cCCCeEEEEECCc--ccE--EEEee---cc---CCCeE
Q 023018 133 IWDPSS-GNLKC----TLEG-PGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNADR--AAY--LNMFS---GH---GSSVT 195 (288)
Q Consensus 133 i~d~~~-~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~---~~---~~~i~ 195 (288)
+|++.+ ++... .+.. ....+..++|+|++++++++ ..++.|.+|++.. ++. ...+. .. ...+.
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCcc
Confidence 999987 54432 2222 34478899999999976555 4789999999953 332 22222 11 23567
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEEeCC--CC--ceeEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEE--cCC
Q 023018 196 CGDFTPDGKTICTGS-DDATLRVWNPK--SG--ENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVN--ITT 267 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~-~dg~i~i~d~~--~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd--~~t 267 (288)
.++|+|++++|+++. .++.|.+||+. ++ +.+..+.. + ..+..++|+|++++|++++ .++.|.+|+ ..+
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT---E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC---S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC---C-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 899999999887554 78999999998 32 33333432 2 3378899999999888887 579999994 456
Q ss_pred CcEE--EEe---cceEEEEEeec
Q 023018 268 GKVC--CLN---FQYTCVAYDLD 285 (288)
Q Consensus 268 ~~~~--~~~---~~~~~~~~~~d 285 (288)
|+.. ..+ ....+++|.++
T Consensus 311 g~~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 311 GLLHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp TEEEEEEEEECSSSCCEEEEEEE
T ss_pred ceeeEccccccCCCCeeEEEEcc
Confidence 6543 222 34667777654
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=7.1e-22 Score=162.91 Aligned_cols=210 Identities=12% Similarity=0.039 Sum_probs=159.6
Q ss_pred CCeeEeecCC-CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecccc------CcEEEEEEecCCCEEEEEeC
Q 023018 55 DSTHIFSGHS-DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHK------DSVSSLAFSMDGQLLASGGL 127 (288)
Q Consensus 55 ~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~~ 127 (288)
+.+..+..+. ..+..++|+|++..+++++..++.|.+|++.+++.+..+.... ..+.+++|+|++++|++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcc
Confidence 3344444333 2578899999444456666778999999999988877765322 23678999999999998886
Q ss_pred C------------CeEEEEeCCCCce---eEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-
Q 023018 128 D------------GLVQIWDPSSGNL---KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG- 191 (288)
Q Consensus 128 d------------g~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~- 191 (288)
+ +.|.+||+.+++. +..+..+ ..+.+++|+|+++ +++++ +.|++||+.+++.+..+..+.
T Consensus 112 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~ 187 (349)
T 1jmx_B 112 PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNW 187 (349)
T ss_dssp EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTC
T ss_pred cccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEcc--CcEEEEeCCCCceecccccccc
Confidence 5 8999999988543 3344433 3588899999999 55554 349999998887766554221
Q ss_pred -------------------------------------------------------------------CCeEEEEEcC-CC
Q 023018 192 -------------------------------------------------------------------SSVTCGDFTP-DG 203 (288)
Q Consensus 192 -------------------------------------------------------------------~~i~~~~~~p-~~ 203 (288)
..+..++|+| ++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg 267 (349)
T 1jmx_B 188 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 267 (349)
T ss_dssp CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT
T ss_pred CCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC
Confidence 1345677889 99
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 204 KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
++|+++ ++.|.+||+.+++.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+..+
T Consensus 268 ~~l~~~--~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 268 NQIYGV--LNRLAKYDLKQRKLIKAANL----DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp TEEEEE--ESEEEEEETTTTEEEEEEEC----SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CEEEEE--cCeEEEEECccCeEEEEEcC----CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeee
Confidence 999888 88999999999988777763 345678999999998888888999999999999988876
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=2.7e-22 Score=181.83 Aligned_cols=215 Identities=13% Similarity=0.092 Sum_probs=162.9
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe--eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (288)
.|.+++|+| ++++|++++. +.|++|++.++. ....+..|...+.+++|+|+|++|++++ ++.|++||+.+++...
T Consensus 110 ~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 478999999 7778877776 999999999873 3455666888899999999999999887 5699999999887665
Q ss_pred EeccCCCC----------------EEEEEEcCCCCEEEEecCCC---------------------------------eEE
Q 023018 144 TLEGPGGG----------------VEWVSWHPRGHIVLAGSEDS---------------------------------TVW 174 (288)
Q Consensus 144 ~~~~~~~~----------------i~~~~~~~~~~~l~~~~~dg---------------------------------~i~ 174 (288)
....+... +..++|+|+|++|++++.++ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 54433332 47799999999999987665 889
Q ss_pred EEECCc-ccEEEEee--ccCCCeEEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCceeEEEcCCCc-cccCeEEEEEc
Q 023018 175 MWNADR-AAYLNMFS--GHGSSVTCGDFTPDGKTICTGSD-----DATLRVWNPKSGENIHVIRGHPY-HTEGLTCLTIS 245 (288)
Q Consensus 175 i~d~~~-~~~~~~~~--~~~~~i~~~~~~p~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~~ 245 (288)
+||+.+ ++...... .+...+..++| |+|++|++++. +..|++||+.+++....+..+.. ....+..++|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 999988 76554432 36678999999 99999987764 56799999999887766654210 00134678999
Q ss_pred CCCCEEEEEeCCCcEEEEEcC-CCcEEEEe----cceEEE-EEeec
Q 023018 246 ADSTLALSGSKDGSVHMVNIT-TGKVCCLN----FQYTCV-AYDLD 285 (288)
Q Consensus 246 ~~~~~l~~~~~dg~i~iwd~~-t~~~~~~~----~~~~~~-~~~~d 285 (288)
|+|+++++++.+|.+++|.+. +++ ...+ ..+..+ .|+|+
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~d 390 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEK 390 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETT
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCC
Confidence 999998999999988888775 445 5544 234444 47765
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=2.7e-21 Score=158.58 Aligned_cols=203 Identities=11% Similarity=0.070 Sum_probs=160.1
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeeccccC--cEEEEEEecCCCEEE-EEeCCCeEEEEeCCCCceeEEeccCC-----
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGHKD--SVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLEGPG----- 149 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~----- 149 (288)
.++++++.++.|.+||+.+++.+..+..... .+..++|+|++++++ ++..++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999988887763221 478899999998664 55567899999999998877665321
Q ss_pred CCEEEEEEcCCCCEEEEec------------CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 023018 150 GGVEWVSWHPRGHIVLAGS------------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (288)
Q Consensus 150 ~~i~~~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i 217 (288)
..+..++|+|++++++++. .++.|.+||+.+++.+..+.. ...+..++|+|++++|+++ ++.|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 1467899999999988886 579999999998888777764 4567889999999988887 688999
Q ss_pred EeCCCCceeEEEcCCC--c-------------------------------------------------------------
Q 023018 218 WNPKSGENIHVIRGHP--Y------------------------------------------------------------- 234 (288)
Q Consensus 218 ~d~~~~~~~~~~~~~~--~------------------------------------------------------------- 234 (288)
||+.+++....+.... .
T Consensus 159 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred EECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 9999887665554321 0
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 235 HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 235 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
+...+.+++|+|++++|+++ ++.|++||+.+++.+..+ ..+.+++|+|+
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 290 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTD 290 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTT
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCC
Confidence 01234568999999998888 799999999999988776 45677888775
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=5.5e-22 Score=178.90 Aligned_cols=216 Identities=13% Similarity=0.110 Sum_probs=162.2
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC-----C
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-----G 139 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-----~ 139 (288)
..|.+++|+| ++.++++ . ++.|++||+.+++..... .+...+.+++|+|+|++|+++ .++.|++|++.+ +
T Consensus 82 ~~v~~~~~sp-d~~~~~~-~-~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAG-RGLVVLF-T-QGGLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETT-TTEEEEE-E-TTEEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECC-CCeEEEE-E-CCEEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 5799999999 5555544 3 499999999988765444 466778899999999999885 679999999998 7
Q ss_pred ceeEEeccCCCC--------------EEEEEEcCCCCEEEEec---------------------------------CCCe
Q 023018 140 NLKCTLEGPGGG--------------VEWVSWHPRGHIVLAGS---------------------------------EDST 172 (288)
Q Consensus 140 ~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~---------------------------------~dg~ 172 (288)
+.......+... +.+++|+|+|++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 766544433332 47899999999999987 4467
Q ss_pred EEEEECCcccEEEEee--ccCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeEEEcCC--CccccCeEEEE
Q 023018 173 VWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGSDDA-----TLRVWNPKSGENIHVIRGH--PYHTEGLTCLT 243 (288)
Q Consensus 173 i~i~d~~~~~~~~~~~--~~~~~i~~~~~~p~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~ 243 (288)
|++||+.+++...... .+...+..++|+|+|++|++++.++ .|++||+.+++....+... ......+..+.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 9999999887654442 4567799999999999999887765 8999999988443333211 00112246789
Q ss_pred EcC--CCCEEEEEeCCCcEEEEEcC-CCcEEEEec----ceEE-EEEeec
Q 023018 244 ISA--DSTLALSGSKDGSVHMVNIT-TGKVCCLNF----QYTC-VAYDLD 285 (288)
Q Consensus 244 ~~~--~~~~l~~~~~dg~i~iwd~~-t~~~~~~~~----~~~~-~~~~~d 285 (288)
|+| +|++|++++.+|.+++|.+. +++.+..+. .+.. ++|+|+
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd 366 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK 366 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTT
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC
Confidence 999 99999999999999999886 667666662 2333 677765
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.9e-21 Score=160.38 Aligned_cols=210 Identities=11% Similarity=0.035 Sum_probs=161.2
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecccc-CcEEEEEEecCCCEEE-EEeCCCeEEEEeCCCCceeEEec
Q 023018 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHK-DSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLE 146 (288)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~ 146 (288)
.+++++ ++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.+++....+.
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 456677 78899999999999999999999888876443 2567899999998665 45578999999999998877766
Q ss_pred cCC------CCEEEEEEcCCCCEEEEecCC------------CeEEEEECCcccE---EEEeeccCCCeEEEEEcCCCCE
Q 023018 147 GPG------GGVEWVSWHPRGHIVLAGSED------------STVWMWNADRAAY---LNMFSGHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 147 ~~~------~~i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~p~~~~ 205 (288)
... ..+..++|+|+++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 432 237789999999999998865 8999999988543 33333 334688999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCCCc---------------------------------------------------
Q 023018 206 ICTGSDDATLRVWNPKSGENIHVIRGHPY--------------------------------------------------- 234 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------------------------------------------- 234 (288)
+++++ +.|++||+.+++....+.....
T Consensus 161 l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 66654 3499999998887766643210
Q ss_pred --------------cccCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 235 --------------HTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 235 --------------~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
....+..++|+| ++++|+++ ++.|++||+.+++.+..+ ..+.+++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 305 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKK 305 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSS
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCC
Confidence 001345677889 99998888 889999999999988776 34667888876
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=1e-20 Score=156.25 Aligned_cols=224 Identities=14% Similarity=0.194 Sum_probs=155.2
Q ss_pred ecCCCCEEEEEEcCCCCcEEEEEeC--CCeEEEEEccCCe--eeEeeccccCcEEEEEEecCCCEEEEEe-CCCeEEEEe
Q 023018 61 SGHSDEVYSVACSPTDATLVATGGG--DDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQIWD 135 (288)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d 135 (288)
..+...+..++|+| ++++++++.. ++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.|.+|+
T Consensus 36 ~~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34456678899999 6665544432 6899999998765 3444455677788999999999888887 789999999
Q ss_pred CCC-Cc--eeEEeccC---------CCCEEEEEEcCCCCEEEEecCCCeEEEEECC-cccEE--EEeec-cCCCeEEEEE
Q 023018 136 PSS-GN--LKCTLEGP---------GGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAYL--NMFSG-HGSSVTCGDF 199 (288)
Q Consensus 136 ~~~-~~--~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~--~~~~~-~~~~i~~~~~ 199 (288)
+.. +. .+..+... ...+.+++|+|+++++++...++.|++|++. +++.. ..+.. ....+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 963 32 22223211 1248899999999977777778999999998 45432 22222 2336788999
Q ss_pred cCCCCEEEEE-eCCCeEEEEeCCC--Cce--eEEEcCCCc---cccCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCC-C-
Q 023018 200 TPDGKTICTG-SDDATLRVWNPKS--GEN--IHVIRGHPY---HTEGLTCLTISADSTLAL-SGSKDGSVHMVNITT-G- 268 (288)
Q Consensus 200 ~p~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~~~~~~---~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~t-~- 268 (288)
+|+|++|+++ ..++.|.+|++.. ++. +..+..... ....+..++|+|+|++|+ +...++.|.+|++.. +
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 9999977664 5688999999874 432 222222110 114588899999999774 555689999999973 2
Q ss_pred -cEEEEe----cceEEEEEeec
Q 023018 269 -KVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 269 -~~~~~~----~~~~~~~~~~d 285 (288)
+.+..+ ..+..++|+||
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spd 296 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPT 296 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTT
T ss_pred EEEeEEEecCCCCcCeEEECCC
Confidence 444443 23678888876
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=7.6e-22 Score=177.98 Aligned_cols=225 Identities=15% Similarity=0.121 Sum_probs=166.5
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC-----CeeeEeeccccCc--------------EEEEEEe
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-----GDWASEIQGHKDS--------------VSSLAFS 116 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~--------------i~~~~~~ 116 (288)
....+..+...+.+++|+| +++.|+++ .++.|++|++.+ ++.......+... +.++.|+
T Consensus 112 ~~~~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S 189 (706)
T 2z3z_A 112 KVTYLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWS 189 (706)
T ss_dssp EEEEEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEEC
T ss_pred ceEEccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEEC
Confidence 3445566777889999999 77777774 579999999998 7766554444333 4789999
Q ss_pred cCCCEEEEEe---------------------------------CCCeEEEEeCCCCceeEEec--cCCCCEEEEEEcCCC
Q 023018 117 MDGQLLASGG---------------------------------LDGLVQIWDPSSGNLKCTLE--GPGGGVEWVSWHPRG 161 (288)
Q Consensus 117 ~~~~~l~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~ 161 (288)
|+|++|++++ .+..|++||+.+++...... .+...+.+++|+|+|
T Consensus 190 pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 269 (706)
T 2z3z_A 190 PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE 269 (706)
T ss_dssp TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC
Confidence 9999999987 44689999999887654432 355679999999999
Q ss_pred CEEEEecCCC-----eEEEEECCcccEEEEee-c-cCC---CeEEEEEcC--CCCEEEEEeCCCeEEEEeCC-CCceeEE
Q 023018 162 HIVLAGSEDS-----TVWMWNADRAAYLNMFS-G-HGS---SVTCGDFTP--DGKTICTGSDDATLRVWNPK-SGENIHV 228 (288)
Q Consensus 162 ~~l~~~~~dg-----~i~i~d~~~~~~~~~~~-~-~~~---~i~~~~~~p--~~~~l~~~~~dg~i~i~d~~-~~~~~~~ 228 (288)
+.|++++.++ .|++||+.+++....+. . +.. .+..++|+| +|++|++++.+|.+++|.+. ++..+..
T Consensus 270 ~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~ 349 (706)
T 2z3z_A 270 NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ 349 (706)
T ss_dssp SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE
T ss_pred CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe
Confidence 9999887665 89999999884333332 1 222 246789999 99999999999988888765 5566666
Q ss_pred EcCCCccccCeEE-EEEcCCCCEEEEEeC-CC----cEEEEEcCCCcEEEEe--cceEEEEEeec
Q 023018 229 IRGHPYHTEGLTC-LTISADSTLALSGSK-DG----SVHMVNITTGKVCCLN--FQYTCVAYDLD 285 (288)
Q Consensus 229 ~~~~~~~~~~v~~-~~~~~~~~~l~~~~~-dg----~i~iwd~~t~~~~~~~--~~~~~~~~~~d 285 (288)
+.. +...+.. ++|+|+++.|+.++. ++ .|+.|++.+++..... ..+..++|+||
T Consensus 350 l~~---~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spd 411 (706)
T 2z3z_A 350 VTK---GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPD 411 (706)
T ss_dssp CCC---SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTT
T ss_pred cCC---CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCC
Confidence 654 4556766 799999987765544 44 6888888887643332 45677888876
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=1.7e-20 Score=155.02 Aligned_cols=213 Identities=16% Similarity=0.209 Sum_probs=148.5
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEe-CCCeEEEEEccC-C--eeeEeecc---------ccCcEEEEEEecCCCEEE
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGG-GDDKGFFWRINQ-G--DWASEIQG---------HKDSVSSLAFSMDGQLLA 123 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~-~--~~~~~~~~---------~~~~i~~~~~~~~~~~l~ 123 (288)
+..+..+...+..++|+| ++++|++++ .++.|.+|++.. + ..+..+.. +...+.+++|+|++++++
T Consensus 78 ~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 78 LNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAV 156 (347)
T ss_dssp EEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred eeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEE
Confidence 334445677889999999 666666665 789999999963 2 22333321 122488999999999666
Q ss_pred EEeCCCeEEEEeCC-CCceeE--Eecc-CCCCEEEEEEcCCCCEEEE-ecCCCeEEEEECCc--ccE--EEEeeccC---
Q 023018 124 SGGLDGLVQIWDPS-SGNLKC--TLEG-PGGGVEWVSWHPRGHIVLA-GSEDSTVWMWNADR--AAY--LNMFSGHG--- 191 (288)
Q Consensus 124 ~~~~dg~i~i~d~~-~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~--- 191 (288)
+...++.|.+|++. +++... .+.. ....+..++|+|+|+++++ +..++.|.+|++.. ++. +..+....
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred EeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 66678899999998 454332 2222 2336888999999996655 56788999999874 432 22333222
Q ss_pred ---CCeEEEEEcCCCCEEE-EEeCCCeEEEEeCCCC---ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-CcEEEE
Q 023018 192 ---SSVTCGDFTPDGKTIC-TGSDDATLRVWNPKSG---ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-GSVHMV 263 (288)
Q Consensus 192 ---~~i~~~~~~p~~~~l~-~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw 263 (288)
..+..++|+|+|++|+ +...++.|.+|++... ..+..+.. +...+..++|+|+|++|++++.+ +.|.+|
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST---EGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC---SSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec---CCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 3588999999999885 4556899999998732 33333332 34567899999999988887764 899999
Q ss_pred --EcCCCcEEEE
Q 023018 264 --NITTGKVCCL 273 (288)
Q Consensus 264 --d~~t~~~~~~ 273 (288)
|..+|++...
T Consensus 314 ~~d~~tg~l~~~ 325 (347)
T 3hfq_A 314 ARDLTSGKLSLL 325 (347)
T ss_dssp EECTTTCCEEEE
T ss_pred EEeCCCCeEEec
Confidence 5567877643
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=5.2e-22 Score=179.46 Aligned_cols=211 Identities=12% Similarity=0.054 Sum_probs=156.6
Q ss_pred CCCeeEeecCCC---CEEEEEEcCCCCcEEEEEeCC---------CeEEEEEccCCeeeEeec---cccCcEEEEEEecC
Q 023018 54 DDSTHIFSGHSD---EVYSVACSPTDATLVATGGGD---------DKGFFWRINQGDWASEIQ---GHKDSVSSLAFSMD 118 (288)
Q Consensus 54 ~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~~~~~~~---~~~~~i~~~~~~~~ 118 (288)
.+....+.+|.. .|.+++|+| ++++|++++.+ +.|++||+.+++. ..+. .|...+..++|+|+
T Consensus 47 g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPd 124 (723)
T 1xfd_A 47 NTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPK 124 (723)
T ss_dssp CCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSS
T ss_pred CcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCC
Confidence 455566776765 499999999 77888887664 7889999998875 3333 34445888999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCE------------------EEEEEcCCCCEEEEecCCC---------
Q 023018 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGV------------------EWVSWHPRGHIVLAGSEDS--------- 171 (288)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i------------------~~~~~~~~~~~l~~~~~dg--------- 171 (288)
|++|+.++. +.|++|++.+++.......+...+ .+++|+|+|+.|++++.++
T Consensus 125 G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 125 GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp TTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred CCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence 999999886 799999999887766655433323 7899999999999887543
Q ss_pred -------------------------eEEEEECCcccEEEEeecc------CCCeEEEEEcCCCCEEEEEeC----CCeEE
Q 023018 172 -------------------------TVWMWNADRAAYLNMFSGH------GSSVTCGDFTPDGKTICTGSD----DATLR 216 (288)
Q Consensus 172 -------------------------~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~p~~~~l~~~~~----dg~i~ 216 (288)
.|++||+.+++....+..+ ...+..++|+|+|++|++... +..|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~ 283 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILT 283 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEE
Confidence 7999999888755555543 567899999999998877653 35799
Q ss_pred EEeCCCCceeEEEcCCCccccCe----EEEEEcCCCCEEEE--EeCCC------cEEEEE-cCCCc
Q 023018 217 VWNPKSGENIHVIRGHPYHTEGL----TCLTISADSTLALS--GSKDG------SVHMVN-ITTGK 269 (288)
Q Consensus 217 i~d~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~--~~~dg------~i~iwd-~~t~~ 269 (288)
+||+.+++....+... +...+ ..++|+|+|+.|+. +..++ .|++|| ..+++
T Consensus 284 ~~d~~~g~~~~~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 284 LCDATTGVCTKKHEDE--SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp EEETTTCCEEEEEEEE--CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred EEeCCCCcceEEEEec--cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 9999998876655431 12222 36799999987664 45666 577788 45554
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=3.2e-21 Score=154.90 Aligned_cols=196 Identities=13% Similarity=0.106 Sum_probs=146.6
Q ss_pred EEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC-CceeEEeccC-CCCEEEEEEcC
Q 023018 82 TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP-GGGVEWVSWHP 159 (288)
Q Consensus 82 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~-~~~i~~~~~~~ 159 (288)
.++.++.|++|++.+++... +..|...+.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 45678999999999888664 445889999999999999999887 78999999998 8776666555 36788999999
Q ss_pred CCCEEEEecC--C--CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEE-EEeCCCeEEEEeC--CCCceeEEEcCC
Q 023018 160 RGHIVLAGSE--D--STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC-TGSDDATLRVWNP--KSGENIHVIRGH 232 (288)
Q Consensus 160 ~~~~l~~~~~--d--g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~-~~~~dg~i~i~d~--~~~~~~~~~~~~ 232 (288)
++++|++++. + ..|..|++.++. ...+..+ ..+..++|+|++++|+ +++.++.+++|++ .++. ...+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~- 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTH- 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCC-
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEccc-
Confidence 9999999983 3 455555555554 3444433 3588999999999887 7778998899885 4443 334433
Q ss_pred CccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcC-CCcEEEEec----ceEEEEEeec
Q 023018 233 PYHTEGLTCLTISADSTLALSGS-KDGSVHMVNIT-TGKVCCLNF----QYTCVAYDLD 285 (288)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-t~~~~~~~~----~~~~~~~~~d 285 (288)
+...+.+++|+|+++.|++++ .++.+++|++. .+..+..+. .+..++|+|+
T Consensus 171 --~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~d 227 (297)
T 2ojh_A 171 --GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPS 227 (297)
T ss_dssp --SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTT
T ss_pred --CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCC
Confidence 567899999999999887665 58999999986 455555553 3445566654
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.9e-21 Score=182.49 Aligned_cols=219 Identities=16% Similarity=0.161 Sum_probs=171.7
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc-----------ccCcEEEEEEe-cCCCEEE
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-----------HKDSVSSLAFS-MDGQLLA 123 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~ 123 (288)
....+..|. .+..++|+| ++..|+.+ .++.|++|++...+ +..+.. |...+.+++|+ |+|++|+
T Consensus 237 ~~~~l~~~~-~~~~~~~Sp-DG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la 312 (1045)
T 1k32_A 237 DLRKHTSFT-DYYPRHLNT-DGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA 312 (1045)
T ss_dssp SCEECCCCC-SSCEEEEEE-SSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE
T ss_pred cceEecCCC-CcceeeEcC-CCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEE
Confidence 344555555 366779999 66666666 47999999995443 335543 33468899999 9999998
Q ss_pred EEeCCCeEEEEeCCCCceeEEeccCCC-CEEEEEEcCCCCEEEEecCCCeEE-EEECCcccEEEEeeccCCCeEEEEEcC
Q 023018 124 SGGLDGLVQIWDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGSEDSTVW-MWNADRAAYLNMFSGHGSSVTCGDFTP 201 (288)
Q Consensus 124 ~~~~dg~i~i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~p 201 (288)
+++ ++.|.+|++..+.... +..+.. .+..++|+ +++.|++++.++.+. +|++.+++... +..+...+..++|+|
T Consensus 313 ~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~Sp 388 (1045)
T 1k32_A 313 FVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDR 388 (1045)
T ss_dssp EEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECT
T ss_pred EEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECC
Confidence 887 7899999998776543 555666 79999999 999999998888899 99998776544 347778899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC----------cEEEEEcCCCcEE
Q 023018 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG----------SVHMVNITTGKVC 271 (288)
Q Consensus 202 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------~i~iwd~~t~~~~ 271 (288)
+|++|++++.++.|++||+.+++....+.. +...+..++|+|+|++|++++.++ .|++||+.+++..
T Consensus 389 DG~~la~~~~~~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~ 465 (1045)
T 1k32_A 389 NGKFAVVANDRFEIMTVDLETGKPTVIERS---REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 465 (1045)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEEC---SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE
T ss_pred CCCEEEEECCCCeEEEEECCCCceEEeccC---CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEE
Confidence 999999999999999999999887776655 667788999999999998877644 8999999998843
Q ss_pred EEe---cceEEEEEeec
Q 023018 272 CLN---FQYTCVAYDLD 285 (288)
Q Consensus 272 ~~~---~~~~~~~~~~d 285 (288)
... .....++|+||
T Consensus 466 ~l~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 466 AATTENSHDYAPAFDAD 482 (1045)
T ss_dssp ECSCSSSBEEEEEECTT
T ss_pred EeeCCCcccCCceEcCC
Confidence 332 33556677765
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=1.8e-19 Score=149.63 Aligned_cols=220 Identities=13% Similarity=0.152 Sum_probs=153.3
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCC----CeEEEEEccC--Cee--eEeeccccCcEEEEEEecCCCEEEEEe-CCCeEEE
Q 023018 63 HSDEVYSVACSPTDATLVATGGGD----DKGFFWRINQ--GDW--ASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQI 133 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~d----g~i~iw~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i 133 (288)
+...+..++|+| ++++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++|++++ .++.|.+
T Consensus 48 ~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 667788899999 67777777765 7999999876 432 3333334556677777 788777766 6889999
Q ss_pred EeCCCCceeEEe------cc--------CCCCEEEEEEcCCCCEEEEec-CCCeEEEEECCccc-------E------EE
Q 023018 134 WDPSSGNLKCTL------EG--------PGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADRAA-------Y------LN 185 (288)
Q Consensus 134 ~d~~~~~~~~~~------~~--------~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-------~------~~ 185 (288)
|++.....+..+ .+ +...+.+++|+|+++++++++ .++.|.+|++.... . ..
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 999754332211 11 123468899999999666554 57899999886533 1 11
Q ss_pred EeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCC--CcE
Q 023018 186 MFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKD--GSV 260 (288)
Q Consensus 186 ~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i 260 (288)
........+..++|+|+|++|++++ .++.|.+|++.++.. +..+.....+...+..++|+|+|++|+++..+ +.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1223455678999999999988777 689999999987644 33333333344557899999999998776654 899
Q ss_pred EEEEcC--CCcE--EEEec---ceEEEEEeec
Q 023018 261 HMVNIT--TGKV--CCLNF---QYTCVAYDLD 285 (288)
Q Consensus 261 ~iwd~~--t~~~--~~~~~---~~~~~~~~~d 285 (288)
.+|++. +++. +..+. .+..++|+||
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd 316 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLTGIHPRNFIITPN 316 (361)
T ss_dssp EEEEECTTTCCEEEEEEEECSSCCCEEEECTT
T ss_pred EEEEEcCCCCcEEEeeEecCCCCCceEEECCC
Confidence 999995 5653 33332 5678888876
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=2.4e-19 Score=148.89 Aligned_cols=218 Identities=10% Similarity=0.131 Sum_probs=149.4
Q ss_pred eecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee------c--------cccCcEEEEEEecCCCEEEEE
Q 023018 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI------Q--------GHKDSVSSLAFSMDGQLLASG 125 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------~--------~~~~~i~~~~~~~~~~~l~~~ 125 (288)
...+......+++ ++..++++...++.|.+|++.....+..+ . .+...+.+++|+|++++|+++
T Consensus 95 ~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 95 QKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp EECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred eccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 3445556777887 25555555557899999999754322211 1 112346889999999977665
Q ss_pred e-CCCeEEEEeCCCCce------e-------EEeccCCCCEEEEEEcCCCCEEEEec-CCCeEEEEECCcccE--EEEee
Q 023018 126 G-LDGLVQIWDPSSGNL------K-------CTLEGPGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADRAAY--LNMFS 188 (288)
Q Consensus 126 ~-~dg~i~i~d~~~~~~------~-------~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~ 188 (288)
+ .++.|.+|++..... + .........+..++|+|+++++++++ .++.|.+|++.+++. +..+.
T Consensus 173 ~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 173 DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence 5 578999998875431 1 11223445688999999999887776 689999999986643 23232
Q ss_pred ---ccCCCeEEEEEcCCCCEEEEEeCC--CeEEEEeCC--CCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCC
Q 023018 189 ---GHGSSVTCGDFTPDGKTICTGSDD--ATLRVWNPK--SGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGS-KDG 258 (288)
Q Consensus 189 ---~~~~~i~~~~~~p~~~~l~~~~~d--g~i~i~d~~--~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg 258 (288)
.+...+..++|+|+|++|+++..+ +.|.+|++. ++.. +..+.. ...+..++|+|+|++|++++ .++
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~----g~~~~~~~~spdg~~l~~~~~~~~ 328 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT----GIHPRNFIITPNGKYLLVACRDTN 328 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC----SSCCCEEEECTTSCEEEEEETTTT
T ss_pred cCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC----CCCCceEEECCCCCEEEEEECCCC
Confidence 233456899999999999777665 899999985 4442 223321 34678899999999888887 578
Q ss_pred cEEEE--EcCCCcEEEEe-----cceEEEEEe
Q 023018 259 SVHMV--NITTGKVCCLN-----FQYTCVAYD 283 (288)
Q Consensus 259 ~i~iw--d~~t~~~~~~~-----~~~~~~~~~ 283 (288)
.|.+| |..+|++.... ..+.|+.|.
T Consensus 329 ~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 329 VIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99995 55678776654 456677664
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=3.5e-21 Score=170.02 Aligned_cols=199 Identities=15% Similarity=0.086 Sum_probs=145.9
Q ss_pred CCCEEEEEEcCCCCcEEEEEeC-CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeC---CCeEEEEeCCC-
Q 023018 64 SDEVYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL---DGLVQIWDPSS- 138 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~- 138 (288)
..+|++++|+| +++.||.++. +|++.||++.+++.......+...+..++|+|+ +++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 45799999999 7777777665 999999999776655444433368999999999 77777664 45556654432
Q ss_pred --CceeEEeccCCCCEEEEEEcCCCC-EEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCC---
Q 023018 139 --GNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD--- 212 (288)
Q Consensus 139 --~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d--- 212 (288)
+... .+.... .+...+|+|+++ .+++.+.++.+.+||+.+++.......+ . .+++|+|+|++|++++.+
T Consensus 99 ~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETT
T ss_pred CCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCC
Confidence 2222 333332 355678888876 3344444455669999888765544433 2 788999999999988776
Q ss_pred -CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCcEEEEe
Q 023018 213 -ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG--SVHMVNITTGKVCCLN 274 (288)
Q Consensus 213 -g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~t~~~~~~~ 274 (288)
+.|++||+.+++.. .+.. +...+..++|+|||+.|+++..+| .|++||+.+++.. .+
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~---~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~ 233 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDS---GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL 233 (582)
T ss_dssp EEEEEEEETTTCCCE-EECC---SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC
T ss_pred CeEEEEEcCCCCCce-Eeec---CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec
Confidence 78999999888754 4544 566789999999999999888888 8999999999887 54
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=4e-20 Score=173.47 Aligned_cols=225 Identities=10% Similarity=0.033 Sum_probs=176.3
Q ss_pred eeEeecCCC-CEEEEEEcCCCCcEEEEEeCCCeEE-EEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 57 THIFSGHSD-EVYSVACSPTDATLVATGGGDDKGF-FWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 57 ~~~~~~h~~-~v~~~~~~~~~~~~l~~~~~dg~i~-iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
...+..|.. .+..++|+ ++..|+.++.++.+. +|++.+++... +..|...+..++|+|+|++|++++.++.|++|
T Consensus 329 ~~~~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 329 VLKVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 405 (1045)
T ss_dssp EEECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEE
Confidence 344566777 89999999 566777777788888 89988776544 34788899999999999999999999999999
Q ss_pred eCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCC----------eEEEEECCcccEEEEeeccCCCeEEEEEcCCCC
Q 023018 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS----------TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
|+.+++....+..+...+.+++|+|+|++|++++.++ .|++||+.+++ +..+..|...+..++|+|+|+
T Consensus 406 d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 406 DLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSK 484 (1045)
T ss_dssp ETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSC
T ss_pred ECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCC
Confidence 9999988887778888899999999999998887644 89999998877 666777888899999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCce-------eEEE--------------------------c-------CCCccccCeEEEEE
Q 023018 205 TICTGSDDATLRVWNPKSGEN-------IHVI--------------------------R-------GHPYHTEGLTCLTI 244 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~-------~~~~--------------------------~-------~~~~~~~~v~~~~~ 244 (288)
+|++++.++...+|+...... +..+ . ....+...+..+++
T Consensus 485 ~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~ 564 (1045)
T 1k32_A 485 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 564 (1045)
T ss_dssp EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEE
T ss_pred EEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEE
Confidence 999999888777776543211 0000 0 00113456889999
Q ss_pred cCCCCEEEE-------------EeCCCcEEEEEcCCCcEEEEecceEEEEEeec
Q 023018 245 SADSTLALS-------------GSKDGSVHMVNITTGKVCCLNFQYTCVAYDLD 285 (288)
Q Consensus 245 ~~~~~~l~~-------------~~~dg~i~iwd~~t~~~~~~~~~~~~~~~~~d 285 (288)
+|++.++++ ......|++||+.+++.......+..++||||
T Consensus 565 s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~v~~~~~S~D 618 (1045)
T 1k32_A 565 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSAD 618 (1045)
T ss_dssp CSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTT
T ss_pred cCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEeecCcceEEECCC
Confidence 999987775 12355899999999987666566778888876
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.8e-20 Score=165.39 Aligned_cols=213 Identities=13% Similarity=0.147 Sum_probs=153.9
Q ss_pred eeEeecCC-CCEEEEEEcCCCCcEEEEEeC---CCeEEEEEccC---CeeeEeeccccCcEEEEEEecCCCE-EEEEeCC
Q 023018 57 THIFSGHS-DEVYSVACSPTDATLVATGGG---DDKGFFWRINQ---GDWASEIQGHKDSVSSLAFSMDGQL-LASGGLD 128 (288)
Q Consensus 57 ~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d 128 (288)
...+..|. ..+..++|+| + +++++++. +....+|.+.. +... .+... ..+...+|+|+++. +++++.+
T Consensus 56 ~~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~ 131 (582)
T 3o4h_A 56 TVKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATE 131 (582)
T ss_dssp EEECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECS
T ss_pred cEeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCC
Confidence 34455555 6899999999 5 77777765 45556665543 2222 34322 23446788888863 3333444
Q ss_pred CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCC----CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCC
Q 023018 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
+.+.+||+.+++.......+. .+++|+|+|++|++++.+ +.|++||+.+++.. .+..+...+..++|+|+|+
T Consensus 132 ~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~ 207 (582)
T 3o4h_A 132 DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMK 207 (582)
T ss_dssp SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSC
T ss_pred CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCC
Confidence 555699999887655554333 789999999999988776 78999999888754 5677888899999999999
Q ss_pred EEEEEeCCC--eEEEEeCCCCceeEEEcCCCccccCeEEEE--------EcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 205 TICTGSDDA--TLRVWNPKSGENIHVIRGHPYHTEGLTCLT--------ISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 205 ~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+|+++..++ .|++||+.+++.. .+.. +...+..+. |+|+|.++++++.+|.+++|++ |+.....
T Consensus 208 ~l~~~~~~~~~~i~~~d~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~ 281 (582)
T 3o4h_A 208 VTAGLETAREARLVTVDPRDGSVE-DLEL---PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAP 281 (582)
T ss_dssp EEEEEECSSCEEEEEECTTTCCEE-ECCC---SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCC
T ss_pred EEEEccCCCeeEEEEEcCCCCcEE-EccC---CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccC
Confidence 999888888 8999999988776 5544 334444455 9999998999999999999999 7766433
Q ss_pred -cceEEEEEe
Q 023018 275 -FQYTCVAYD 283 (288)
Q Consensus 275 -~~~~~~~~~ 283 (288)
..+..++|+
T Consensus 282 ~~~v~~~~~s 291 (582)
T 3o4h_A 282 QGNHGRVVLW 291 (582)
T ss_dssp SSEEEEEEEE
T ss_pred CCceEEEEec
Confidence 334455555
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1e-21 Score=177.45 Aligned_cols=201 Identities=12% Similarity=0.142 Sum_probs=147.8
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccC---cEEEEEEecCCCEEEEEeC---------CCeEEEEeC
Q 023018 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGGL---------DGLVQIWDP 136 (288)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~---------dg~i~i~d~ 136 (288)
.++|+| ++.++++ +.|+.|++|++.+++....+..+.. .+.+++|+|+|++|++++. ++.|++||+
T Consensus 20 ~~~~s~-dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWIS-GQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESS-SSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECC-CCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 689999 6666655 4689999999999988777765543 4889999999999998876 689999999
Q ss_pred CCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEe-eccCCCe-----------------EEEE
Q 023018 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSSV-----------------TCGD 198 (288)
Q Consensus 137 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i-----------------~~~~ 198 (288)
.+++.+.... ....+..++|+|+|+.|+++. ++.|++|++.+++..... .++...+ .+++
T Consensus 98 ~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 98 SNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 9887621111 124588899999999999886 689999999887765433 2222222 4899
Q ss_pred EcCCCCEEEEEeCCC----------------------------------eEEEEeCCCCcee--EEEcC---CCccccCe
Q 023018 199 FTPDGKTICTGSDDA----------------------------------TLRVWNPKSGENI--HVIRG---HPYHTEGL 239 (288)
Q Consensus 199 ~~p~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~--~~~~~---~~~~~~~v 239 (288)
|+|+|++|++++.|. .|++||+.+++.. ..+.. ...+...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999887552 7889999887642 12211 01256678
Q ss_pred EEEEEcCCCCEEEEEeCC----CcEEEEE----cCCCcEEEE
Q 023018 240 TCLTISADSTLALSGSKD----GSVHMVN----ITTGKVCCL 273 (288)
Q Consensus 240 ~~~~~~~~~~~l~~~~~d----g~i~iwd----~~t~~~~~~ 273 (288)
..++|+||++++++.... ..|++|| +.++++...
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 999999998877764432 2489999 877765543
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=1.7e-19 Score=150.99 Aligned_cols=215 Identities=12% Similarity=0.024 Sum_probs=157.3
Q ss_pred CCCeeEeecCCCCEEE-----EEEcCCCCcEEEEEeC-CC--eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE
Q 023018 54 DDSTHIFSGHSDEVYS-----VACSPTDATLVATGGG-DD--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG 125 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~-----~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 125 (288)
......+..|...... .+|+| +++.|+.++. +| .|.+|++.+++.......+...+..+.|+|++++|+.+
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 4556777777766666 88999 6666666655 67 48888998888777766665555567899999999999
Q ss_pred eCCCeEEEEeCCCCceeEEeccCCCCEEEEE--EcCCCCEEEEe----------------------cCCCeEEEEECCcc
Q 023018 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVS--WHPRGHIVLAG----------------------SEDSTVWMWNADRA 181 (288)
Q Consensus 126 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~----------------------~~dg~i~i~d~~~~ 181 (288)
+.++.|++||+.+++....+..+...+.... ++|++++++.. ..+..|++||+.++
T Consensus 99 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred eCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 9999999999999987776666665554444 48899888742 24478999999988
Q ss_pred cEEEEeeccCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE
Q 023018 182 AYLNMFSGHGSSVTCGDFTP-DGKTICTGSDD------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (288)
Q Consensus 182 ~~~~~~~~~~~~i~~~~~~p-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 254 (288)
+... +..+...+..+.|+| +|+.|+.+... ..|.++|+..+.. ..+.... ....+..+.|+|+|+.|+..
T Consensus 179 ~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~-~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 179 ESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA-EGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC-TTEEEEEEEECTTSSCEEEE
T ss_pred ceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC-CCcccccceECCCCCEEEEE
Confidence 6544 444667789999999 99998877753 3788888875543 3443311 11357788999999877554
Q ss_pred eC-CC----cEEEEEcCCCcEEE
Q 023018 255 SK-DG----SVHMVNITTGKVCC 272 (288)
Q Consensus 255 ~~-dg----~i~iwd~~t~~~~~ 272 (288)
+. ++ .|++||+.+++...
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~ 278 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQ 278 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEE
T ss_pred ecCCCCCcceEEEEecCCCceEE
Confidence 33 22 39999999998544
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=3e-19 Score=148.69 Aligned_cols=220 Identities=8% Similarity=0.095 Sum_probs=153.5
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEcc-CCeeeEeeccc-cCcEEEEEEecCCCE--EEEEe------------
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRIN-QGDWASEIQGH-KDSVSSLAFSMDGQL--LASGG------------ 126 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~--l~~~~------------ 126 (288)
+...+..++|+| ++++|++++.+ .|.+|++. +++........ .+...+++|+|++++ ++++.
T Consensus 38 ~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 334678899999 77778888877 99999997 77665433211 123456889999994 44543
Q ss_pred -CCCeEEEEeCC-CCceeEEec----cCCCCEEEEEEcCCCCEEEEec-CCCeEEEEECC-cccEE--EEee--ccCCCe
Q 023018 127 -LDGLVQIWDPS-SGNLKCTLE----GPGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNAD-RAAYL--NMFS--GHGSSV 194 (288)
Q Consensus 127 -~dg~i~i~d~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~--~~~~--~~~~~i 194 (288)
.+|.+.+|++. .++....+. .+...+.+++|+|+|++++++. .++.|++|++. +++.. ..+. .+...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999997 465544333 2456799999999999888765 46899999998 66543 3333 235678
Q ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEeCC--CCcee---EEEcCCCc----ccc------CeEEEE-EcCCCCEEEEEeCC
Q 023018 195 TCGDFTPDGKTICTGSD-DATLRVWNPK--SGENI---HVIRGHPY----HTE------GLTCLT-ISADSTLALSGSKD 257 (288)
Q Consensus 195 ~~~~~~p~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~~~~~----~~~------~v~~~~-~~~~~~~l~~~~~d 257 (288)
..++|+|+|++|++++. ++.|.+|++. +++.. ..+...+. +.. .+..++ |+|+|++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 99999999999988775 6899998764 55542 22322111 121 478899 99999988876543
Q ss_pred C------cEEEEEcC-CCcEEEE---e----cceEEEEEee
Q 023018 258 G------SVHMVNIT-TGKVCCL---N----FQYTCVAYDL 284 (288)
Q Consensus 258 g------~i~iwd~~-t~~~~~~---~----~~~~~~~~~~ 284 (288)
. .|.+|++. +|++... . .....++|+|
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 2 89999996 6776531 2 2356677777
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=3.6e-18 Score=140.18 Aligned_cols=218 Identities=13% Similarity=0.120 Sum_probs=166.3
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCC------------------------CeEEEEEccCCeeeEeec-cccCcEEEEEEecC
Q 023018 64 SDEVYSVACSPTDATLVATGGGD------------------------DKGFFWRINQGDWASEIQ-GHKDSVSSLAFSMD 118 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~d------------------------g~i~iw~~~~~~~~~~~~-~~~~~i~~~~~~~~ 118 (288)
-+.+.+++++| +++++++...+ +.|.+||..+++.+..+. .+-.....++++|+
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 35699999999 67788887776 479999998888776654 34456789999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCc-eeEEec---------cCCCCEEEEEEcC-CCCEEEEec-CCCeEEEEECCcccEEEE
Q 023018 119 GQLLASGGLDGLVQIWDPSSGN-LKCTLE---------GPGGGVEWVSWHP-RGHIVLAGS-EDSTVWMWNADRAAYLNM 186 (288)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~-~~~~~~---------~~~~~i~~~~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~~ 186 (288)
++++++...++.|++|+..... .+..+. .+......++++| ++.++++.+ .++.|++|+ .++..+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888889999999976542 444442 3344689999999 788888886 689999999 56776666
Q ss_pred eeccC----------CCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE-
Q 023018 187 FSGHG----------SSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG- 254 (288)
Q Consensus 187 ~~~~~----------~~i~~~~~~p~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 254 (288)
+.... ..+..++++|+ +.++++...++.|++|+..+++.+..+.... +...+..++++| +..+++.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTTCEEEEEEET-TEEEEEEC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCCCcceeeecC-CEEEEeCC
Confidence 64322 34899999998 6666777778899999998888888875432 456788999999 4444333
Q ss_pred ------eCCCcEEEEEcCCCcEEEEe-------cceEEEEEeec
Q 023018 255 ------SKDGSVHMVNITTGKVCCLN-------FQYTCVAYDLD 285 (288)
Q Consensus 255 ------~~dg~i~iwd~~t~~~~~~~-------~~~~~~~~~~d 285 (288)
..+..|++|++.+|+.+..+ ..+.+++++++
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC
Confidence 33458999999999999886 23678888776
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=1.1e-19 Score=164.83 Aligned_cols=199 Identities=15% Similarity=0.194 Sum_probs=147.7
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCc-----EEEEEEecCCCEEEEEeCC---------CeE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS-----VSSLAFSMDGQLLASGGLD---------GLV 131 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~d---------g~i 131 (288)
....++|+| ++.+++++ ||.|++|++.+++....+.+|... ...+.|+|+|++|+.++.+ +.+
T Consensus 18 ~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 456899999 77888876 899999999999887777766532 2447899999999998875 667
Q ss_pred EEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee-ccCCCe----------------
Q 023018 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSV---------------- 194 (288)
Q Consensus 132 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i---------------- 194 (288)
.+||+.+++.. .+..+...+...+|||+|+.||.+. ++.|++|++.++...+... ++...+
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 79999998754 3555667899999999999999885 5899999998876543222 222222
Q ss_pred -EEEEEcCCCCEEEEEeCCC------------------------------------eEEEEeCCC---Cc--eeEEEcCC
Q 023018 195 -TCGDFTPDGKTICTGSDDA------------------------------------TLRVWNPKS---GE--NIHVIRGH 232 (288)
Q Consensus 195 -~~~~~~p~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~--~~~~~~~~ 232 (288)
..+.|||||++|+.++.|. .|++||+.+ +. ....+...
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 3489999999998875321 588899988 63 22333321
Q ss_pred C---ccccCeEEEEEcCCCCEEEEEeC----CCcEEEEEcCCCc
Q 023018 233 P---YHTEGLTCLTISADSTLALSGSK----DGSVHMVNITTGK 269 (288)
Q Consensus 233 ~---~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~t~~ 269 (288)
. .+...+..++|+|||++++.... +..|++||+.+|+
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 1 14566889999999997665432 3479999999987
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=4.5e-18 Score=141.32 Aligned_cols=220 Identities=15% Similarity=0.099 Sum_probs=151.4
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEe----------CCCeEEEEEccCCeeeEeeccc------cCcEEEEEEecC
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGG----------GDDKGFFWRINQGDWASEIQGH------KDSVSSLAFSMD 118 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~------~~~i~~~~~~~~ 118 (288)
+.+..+..+..+ .++|+| ++++++++. .++.|.+||..+.+.+..+... ......++++|+
T Consensus 42 ~~~~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spd 118 (361)
T 2oiz_A 42 KFLGMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTD 118 (361)
T ss_dssp CEEEEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTT
T ss_pred eEEEEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCC
Confidence 445566666665 899999 677777765 3578999999998888777532 234567999999
Q ss_pred CCEEEEEeC--CCeEEEEeCCCCceeEE-eccCCCCEEEEEEcCCC-CEEEEecCCCe----------------------
Q 023018 119 GQLLASGGL--DGLVQIWDPSSGNLKCT-LEGPGGGVEWVSWHPRG-HIVLAGSEDST---------------------- 172 (288)
Q Consensus 119 ~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~---------------------- 172 (288)
|++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|.+ ..+++.+.||.
T Consensus 119 g~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~ 196 (361)
T 2oiz_A 119 GKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMF 196 (361)
T ss_dssp SSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCS
T ss_pred CCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceE
Confidence 999988864 68999999999988777 44321 1222333322 23333333444
Q ss_pred --------------------------EEEEECCccc--EEEEeecc----------CCCeEEEEEcCCCCEEEEEeC---
Q 023018 173 --------------------------VWMWNADRAA--YLNMFSGH----------GSSVTCGDFTPDGKTICTGSD--- 211 (288)
Q Consensus 173 --------------------------i~i~d~~~~~--~~~~~~~~----------~~~i~~~~~~p~~~~l~~~~~--- 211 (288)
|+++|+.... .+..+... ......++|+|++++++++..
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 197 SVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp CTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred cCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 4444443221 11111000 011112688999888887653
Q ss_pred --------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--cEEEEe----cce
Q 023018 212 --------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG--KVCCLN----FQY 277 (288)
Q Consensus 212 --------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~--~~~~~~----~~~ 277 (288)
.+.|.+||+.+++.+..+.. +. +..++|+|+|++|++++. +.|.+||+.++ +++..+ ...
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~---~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P 350 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPG---RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEAS 350 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEEC---TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSE
T ss_pred CcccccCCCceEEEEECCCCcEEEEEec---CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCc
Confidence 34899999999999998876 33 889999999999998887 99999999999 999886 356
Q ss_pred EEEEEeec
Q 023018 278 TCVAYDLD 285 (288)
Q Consensus 278 ~~~~~~~d 285 (288)
..++++|+
T Consensus 351 ~~~~~~p~ 358 (361)
T 2oiz_A 351 LQVQFHPV 358 (361)
T ss_dssp EEEEECCC
T ss_pred EEEEecCC
Confidence 78888876
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=1.1e-16 Score=128.54 Aligned_cols=217 Identities=13% Similarity=0.171 Sum_probs=161.3
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec------cccCcEEEEEEe-cCCCEEEEEeC-CCeEEE
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ------GHKDSVSSLAFS-MDGQLLASGGL-DGLVQI 133 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~~~~i~~~~~~-~~~~~l~~~~~-dg~i~i 133 (288)
+|-..+.++++++ ++.++++...++.|.+|+.. ++.+..+. .+...+..+++. +++.++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3446789999999 67788888888999999987 55555553 234567899995 66665555533 789999
Q ss_pred EeCCCCceeEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee--ccCCCeEEEEEcCCCCEEEEEe
Q 023018 134 WDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 134 ~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
|+ .+++.+..+.. +...+..++++|+++++++...++.|++|+. .++.+..+. .+...+..++++|+++++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 56766666643 3456899999999998888888899999996 455555554 3445689999999998777777
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC-cEEEEEcCCCcEEEEec------ceEEEEEe
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-SVHMVNITTGKVCCLNF------QYTCVAYD 283 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~t~~~~~~~~------~~~~~~~~ 283 (288)
.++.|++||.. +..+..+.... +...+..++++++|+++++...++ .|++|+. +++.+..+. .+.+++++
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCEEEEEcCC-CCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 78999999974 56666664321 235688999999999888887776 9999995 566666551 24567777
Q ss_pred ec
Q 023018 284 LD 285 (288)
Q Consensus 284 ~d 285 (288)
++
T Consensus 260 ~~ 261 (286)
T 1q7f_A 260 DD 261 (286)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=4.5e-18 Score=141.56 Aligned_cols=198 Identities=15% Similarity=0.194 Sum_probs=141.3
Q ss_pred EEEEEEcCCCCc--EEEEEe-------------CCCeEEEEEcc-CCeeeEeec----cccCcEEEEEEecCCCEEEEEe
Q 023018 67 VYSVACSPTDAT--LVATGG-------------GDDKGFFWRIN-QGDWASEIQ----GHKDSVSSLAFSMDGQLLASGG 126 (288)
Q Consensus 67 v~~~~~~~~~~~--~l~~~~-------------~dg~i~iw~~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~ 126 (288)
+.+++|+| +++ +++++. .+|.+.+|++. +++....+. .+...+.+++|+|+|++|+++.
T Consensus 85 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 85 PRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp GGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 45688899 566 455553 68999999997 455544333 2456789999999999888776
Q ss_pred C-CCeEEEEeCC-CCcee--EEec--cCCCCEEEEEEcCCCCEEEEecC-CCeEEEEECC--cccEE---EEeec-----
Q 023018 127 L-DGLVQIWDPS-SGNLK--CTLE--GPGGGVEWVSWHPRGHIVLAGSE-DSTVWMWNAD--RAAYL---NMFSG----- 189 (288)
Q Consensus 127 ~-dg~i~i~d~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~~----- 189 (288)
. ++.|++|++. +++.. ..+. .+...+..++|+|+|+++++++. ++.|.+|++. +++.. ..+..
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 4 6799999998 67643 2333 23566999999999998887764 6899999765 45432 12221
Q ss_pred --cCC------CeEEEE-EcCCCCEEEEEeCCC------eEEEEeCC-CCceeEE---EcCCCccccCeEEEEEcC---C
Q 023018 190 --HGS------SVTCGD-FTPDGKTICTGSDDA------TLRVWNPK-SGENIHV---IRGHPYHTEGLTCLTISA---D 247 (288)
Q Consensus 190 --~~~------~i~~~~-~~p~~~~l~~~~~dg------~i~i~d~~-~~~~~~~---~~~~~~~~~~v~~~~~~~---~ 247 (288)
+.. .+..++ |+|+|++|++++.+. .|.+|++. +++.... +.. +...+..++|+| +
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~---~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT---PTSGGHSNAVSPCPWS 320 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC---SSCCTTCCCEEECTTC
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec---CCCCcccceecCCCcC
Confidence 121 488999 999999988776433 89999986 5654331 222 233456789999 8
Q ss_pred CCEEEEEeCC-CcEEEEEcCCC
Q 023018 248 STLALSGSKD-GSVHMVNITTG 268 (288)
Q Consensus 248 ~~~l~~~~~d-g~i~iwd~~t~ 268 (288)
|++|++++.+ +.|.+|++...
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEEchh
Confidence 9999988764 89999999876
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=6.2e-20 Score=165.87 Aligned_cols=212 Identities=14% Similarity=0.167 Sum_probs=148.5
Q ss_pred CCCeeEeecCCC---CEEEEEEcCCCCcEEEEEeC---------CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCE
Q 023018 54 DDSTHIFSGHSD---EVYSVACSPTDATLVATGGG---------DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQL 121 (288)
Q Consensus 54 ~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 121 (288)
.+....+.+|.. .|.+++|+| ++++|++++. ++.|++||+.+++.+.... ....+..++|+|+|++
T Consensus 46 g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 46 GQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSK 123 (719)
T ss_dssp CCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTC
T ss_pred CcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCE
Confidence 344455555543 489999999 7777777765 6899999999887631111 1246888999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEec-cCCCCE-----------------EEEEEcCCCCEEEEecCCC------------
Q 023018 122 LASGGLDGLVQIWDPSSGNLKCTLE-GPGGGV-----------------EWVSWHPRGHIVLAGSEDS------------ 171 (288)
Q Consensus 122 l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i-----------------~~~~~~~~~~~l~~~~~dg------------ 171 (288)
|+.+. ++.|++|++.+++...... ++...+ .+++|+|+|+.|++++.+.
T Consensus 124 la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~ 202 (719)
T 1z68_A 124 LAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYG 202 (719)
T ss_dssp EEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECC
T ss_pred EEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccC
Confidence 99886 7899999998887654332 222222 4899999999999987542
Q ss_pred ----------------------eEEEEECCcccEE--------EEeeccCCCeEEEEEcCCCCEEEEEeCC----CeEEE
Q 023018 172 ----------------------TVWMWNADRAAYL--------NMFSGHGSSVTCGDFTPDGKTICTGSDD----ATLRV 217 (288)
Q Consensus 172 ----------------------~i~i~d~~~~~~~--------~~~~~~~~~i~~~~~~p~~~~l~~~~~d----g~i~i 217 (288)
.|++||+.+++.. ..+..|...+..++|+|+++++++.... ..|.+
T Consensus 203 ~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~ 282 (719)
T 1z68_A 203 DEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSI 282 (719)
T ss_dssp SSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEE
T ss_pred CCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEE
Confidence 7899999887642 1233577789999999998777764432 24889
Q ss_pred Ee----CCCCceeEEE----cCCCccccCeE-----EEEEcCCCCEEEE--EeCCC--cEEEEEcCCCcEE
Q 023018 218 WN----PKSGENIHVI----RGHPYHTEGLT-----CLTISADSTLALS--GSKDG--SVHMVNITTGKVC 271 (288)
Q Consensus 218 ~d----~~~~~~~~~~----~~~~~~~~~v~-----~~~~~~~~~~l~~--~~~dg--~i~iwd~~t~~~~ 271 (288)
|| +.+++....+ .. +...+. .+.|+|+|+.|+. +..+| .|++|++.+++..
T Consensus 283 ~d~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~ 350 (719)
T 1z68_A 283 CDFREDWQTWDCPKTQEHIEES---RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI 350 (719)
T ss_dssp EEECSSSSSEECCGGGEEEEEC---SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCE
T ss_pred EcccCCCCCCceEEEEeccccc---CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceE
Confidence 99 7776544333 12 334444 6799999986544 44555 5778888877743
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=9.2e-17 Score=128.96 Aligned_cols=201 Identities=13% Similarity=0.160 Sum_probs=151.3
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeC-CCeEEEEEccCCeeeEeecc-ccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc
Q 023018 63 HSDEVYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (288)
|...+.++++.+.++.++++... ++.|++|+ .+++.+..+.. +...+.+++++|+++++++...++.|.+|+.. ++
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 152 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GN 152 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CC
Confidence 44678999995326777766643 78999999 55666666542 34568999999999987777788999999964 55
Q ss_pred eeEEec--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeecc--CCCeEEEEEcCCCCEEEEEeCCC-eE
Q 023018 141 LKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--GSSVTCGDFTPDGKTICTGSDDA-TL 215 (288)
Q Consensus 141 ~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~~~~dg-~i 215 (288)
.+..+. .+...+..++++++++++++...++.|++|+. .++.+..+... ...+..++++|+|+++++...++ .|
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i 231 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNL 231 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEE
T ss_pred EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEE
Confidence 555554 34456899999999998888888899999997 45556666433 35789999999998888887775 99
Q ss_pred EEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc
Q 023018 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~ 269 (288)
.+||. +++.+..+.... ....+..++++|+|+++++ +.++.|++|++....
T Consensus 232 ~~~~~-~g~~~~~~~~~~-~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 232 TIFTQ-DGQLISALESKV-KHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEECT-TSCEEEEEEESS-CCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred EEECC-CCCEEEEEcccC-CCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 99996 466666665422 2234789999999987776 579999999987643
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=7.4e-17 Score=130.22 Aligned_cols=221 Identities=12% Similarity=0.111 Sum_probs=163.4
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
+...+..+..+.....+++|+|++..+++++..++.|..|+..++ ...+..+...+.+++++++++++++...++.|.
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 345556677777889999999944448888888999999999877 556666777889999999999877777778999
Q ss_pred EEeCCCCceeEEeccC----CCCEEEEEEcCCCCEEEE----ec-------------CCCeEEEEECCcccEEEEeeccC
Q 023018 133 IWDPSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLA----GS-------------EDSTVWMWNADRAAYLNMFSGHG 191 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~ 191 (288)
+||..+++........ ...+..++++|+|+++++ |+ ..+.|..++.. ++ +..+..+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~ 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDR 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCC
Confidence 9999888755443221 234677999999998887 33 13567777765 44 33444556
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCce---eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPK-SGEN---IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 192 ~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
.....++|+|+++.|++.+.++.|.+|++. ++.. ...+ .. ....+..++++++|+++++. ++.|.+|+..
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~--~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV--EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC--SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC--CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 678899999999999777778999999986 4544 2333 21 44556789999999876665 7899999986
Q ss_pred CcEEEEe---cceEEEEEe
Q 023018 268 GKVCCLN---FQYTCVAYD 283 (288)
Q Consensus 268 ~~~~~~~---~~~~~~~~~ 283 (288)
|+.+..+ ..+.+++|+
T Consensus 246 g~~~~~~~~~~~~~~~~f~ 264 (296)
T 3e5z_A 246 GDELGRVLTPQTTSNLCFG 264 (296)
T ss_dssp SCEEEEEECSSCCCEEEEE
T ss_pred CCEEEEEECCCCceeEEEE
Confidence 7776665 226777774
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=6.9e-17 Score=132.50 Aligned_cols=203 Identities=16% Similarity=0.168 Sum_probs=156.0
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-eeEee---------ccccCcEEEEEEec-CCCEEEEEe-CCC
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-WASEI---------QGHKDSVSSLAFSM-DGQLLASGG-LDG 129 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~dg 129 (288)
++-.....++++| ++.++++...++.|++|+..... .+..+ ..+-.....++++| ++.++++.+ .++
T Consensus 88 ~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 88 NLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 3445789999999 67788888889999999986542 44444 23344678999999 787777776 689
Q ss_pred eEEEEeCCCCceeEEeccCC----------CCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEee--ccCCCeEE
Q 023018 130 LVQIWDPSSGNLKCTLEGPG----------GGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFS--GHGSSVTC 196 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~ 196 (288)
.|++|+ .+++.+..+.... .....++++|+ +.++++...++.|++|+..+++.+..+. .+...+..
T Consensus 167 ~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~ 245 (329)
T 3fvz_A 167 RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFA 245 (329)
T ss_dssp EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEE
T ss_pred eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcce
Confidence 999999 5677666664322 24899999998 7778888889999999998888888774 35567889
Q ss_pred EEEcCCCCEEEEE-------eCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 197 GDFTPDGKTICTG-------SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 197 ~~~~p~~~~l~~~-------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
++++| +..+++. ..+..|++|++.+++.+..+.....+...+..++++|+|.++++...++.|++|++..
T Consensus 246 ~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 246 ISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 99999 3333332 2345899999999998888753333567789999999998888888899999999864
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=2.8e-16 Score=128.90 Aligned_cols=228 Identities=14% Similarity=0.088 Sum_probs=164.8
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCC----C
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD----G 129 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g 129 (288)
......+.++...+.+++|+| ++.+++++..++.|.+|+..+++.......+...+.+++++|++++++++..+ +
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTG 112 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred cceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCc
Confidence 344556677777889999999 67788888888999999998877655443466789999999999877777666 6
Q ss_pred eEEEEeCCCCceeEEec--cCCCCEEEEEEcCCCCEEEEecC------CCeEEEEECCcccEEEEeeccCCCeEEEEEcC
Q 023018 130 LVQIWDPSSGNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP 201 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p 201 (288)
.|.+||..++.....+. .....+..++++|+++++++... .+.|..++..+++.... ......+..++|+|
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI-IQNISVANGIALST 191 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE-EEEESSEEEEEECT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe-ecCCCcccceEECC
Confidence 89999998877654433 23456899999999988777654 35677777765544332 22334578999999
Q ss_pred CCCEEEEE-eCCCeEEEEeCCC-CceeEEE-----cCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 202 DGKTICTG-SDDATLRVWNPKS-GENIHVI-----RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 202 ~~~~l~~~-~~dg~i~i~d~~~-~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
++++|+.+ +.++.|.+||+.+ +..+..+ .... ....+..++++++|+++++...++.|.+|+. +++.+..+
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~-~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC-CCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 99876554 4578999999864 3333221 1111 1135778999999998888777899999998 56666655
Q ss_pred c----------ceEEEEEeec
Q 023018 275 F----------QYTCVAYDLD 285 (288)
Q Consensus 275 ~----------~~~~~~~~~d 285 (288)
. .+.+++|++|
T Consensus 270 ~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 270 LIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp ECTTGGGTCSCBCCEEEECTT
T ss_pred EcCCCccccccCcceEEECCC
Confidence 1 3677888765
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=8e-18 Score=150.67 Aligned_cols=214 Identities=13% Similarity=0.111 Sum_probs=148.3
Q ss_pred eeEeecCCCCEE---------EEEEc--CCCCc-EEEEEeCCCeEEEEEcc--C-CeeeEeecc-----ccCcEEEEEEe
Q 023018 57 THIFSGHSDEVY---------SVACS--PTDAT-LVATGGGDDKGFFWRIN--Q-GDWASEIQG-----HKDSVSSLAFS 116 (288)
Q Consensus 57 ~~~~~~h~~~v~---------~~~~~--~~~~~-~l~~~~~dg~i~iw~~~--~-~~~~~~~~~-----~~~~i~~~~~~ 116 (288)
...+..|...+. ..+|+ |++.. ++++...+..|.+|++. . +. ...+.. |...+.+++|+
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEEC
Confidence 344555554544 55565 85544 44444446677777765 2 33 344544 56678899999
Q ss_pred cCCCEEEEEeCC----------CeEEEEeCCC------CceeEEec-cCCCCEEEEEEcCCCCEEEEecCC--------C
Q 023018 117 MDGQLLASGGLD----------GLVQIWDPSS------GNLKCTLE-GPGGGVEWVSWHPRGHIVLAGSED--------S 171 (288)
Q Consensus 117 ~~~~~l~~~~~d----------g~i~i~d~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d--------g 171 (288)
|+|++|++++.+ ..|++|++.+ ++. ..+. .+...+..++|+|+|++|+.++.+ .
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCc
Confidence 999999988876 5899999987 544 3444 455678889999999999887754 3
Q ss_pred eEEEEECC-cc---cEEEEeeccCCCeEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeEEEcCCCccc-----cCeE
Q 023018 172 TVWMWNAD-RA---AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA--TLRVWNPKSGENIHVIRGHPYHT-----EGLT 240 (288)
Q Consensus 172 ~i~i~d~~-~~---~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~-----~~v~ 240 (288)
.|++||+. ++ +.......+...+..+.|+|+|++++++..++ .|.+||+.+++....+....... ..+.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCC
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCc
Confidence 79999998 56 44444444578899999999999888888888 67778876666443333211010 0156
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEE--EcCCCcEEEEe
Q 023018 241 CLTISADSTLALSGSKDGSVHMV--NITTGKVCCLN 274 (288)
Q Consensus 241 ~~~~~~~~~~l~~~~~dg~i~iw--d~~t~~~~~~~ 274 (288)
.++|+|++.++++++. +.+++| |+.+++ +..+
T Consensus 298 ~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l 331 (662)
T 3azo_A 298 WFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDA 331 (662)
T ss_dssp SEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEEC
T ss_pred eEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEe
Confidence 7899999999999988 999999 666665 4444
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.80 E-value=2.7e-17 Score=131.38 Aligned_cols=189 Identities=13% Similarity=0.099 Sum_probs=157.8
Q ss_pred CcEEEEEeCCCeEEEEEccCCeeeEeecccc-CcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCC-CCEEE
Q 023018 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHK-DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG-GGVEW 154 (288)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~ 154 (288)
+++|++++.++.|++||..+++.+..+..+. ..+.++.+.|+|++|+ +.++.|..||. +++.+..+..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 4788999999999999999999999998765 4688999999999888 34778999998 899988888653 46889
Q ss_pred EEEcCCCCEEEEecC-CCeEEEEECCcccEEEEeec------cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q 023018 155 VSWHPRGHIVLAGSE-DSTVWMWNADRAAYLNMFSG------HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIH 227 (288)
Q Consensus 155 ~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~ 227 (288)
+.+.++|+.+++.+. ++.|..++. +++.+..+.. +......+++.++|++|++...++.|..||.. |+.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 999999999999887 788888885 6777766642 11244566789999999999999999999998 99888
Q ss_pred EEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 228 VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 228 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+... ..+.++...++++++++++.+++|..+|..||+.+..+
T Consensus 160 ~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 160 SVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred EEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 88752 34556778899999999888889999999999998887
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=5.3e-18 Score=151.82 Aligned_cols=212 Identities=17% Similarity=0.130 Sum_probs=155.8
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEE--eCCCeEEEEEccCCeeeEeeccccCcEE---------EEEEe--cCCCE-E
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATG--GGDDKGFFWRINQGDWASEIQGHKDSVS---------SLAFS--MDGQL-L 122 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~i~---------~~~~~--~~~~~-l 122 (288)
...+.+|...+..++|++ +..+++.. +.++...||....+.....+..+...+. ...|+ |++++ |
T Consensus 16 ~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 16 AALVASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHHhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 345778999999999998 66666666 5578999999755555566666665555 56666 99998 7
Q ss_pred EEEeC-CCeEEEEeCC--C-CceeEEecc-----CCCCEEEEEEcCCCCEEEEecCC----------CeEEEEECCc---
Q 023018 123 ASGGL-DGLVQIWDPS--S-GNLKCTLEG-----PGGGVEWVSWHPRGHIVLAGSED----------STVWMWNADR--- 180 (288)
Q Consensus 123 ~~~~~-dg~i~i~d~~--~-~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~--- 180 (288)
+.++. +..|.++++. . +. ...+.. +...+..++|+|+|+.|++++.+ ..|++|++.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 76653 5677777776 3 43 344444 45678899999999999998876 5899999987
Q ss_pred ---ccEEEEee-ccCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEeCC-CC---ceeEEEcCCCccccCeEEEEE
Q 023018 181 ---AAYLNMFS-GHGSSVTCGDFTPDGKTICTGSDD--------ATLRVWNPK-SG---ENIHVIRGHPYHTEGLTCLTI 244 (288)
Q Consensus 181 ---~~~~~~~~-~~~~~i~~~~~~p~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~~~~v~~~~~ 244 (288)
+.. ..+. .+...+..++|+|+|++|+.++.+ ..|++||+. ++ +....... +...+..+.|
T Consensus 174 ~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~~~~~~~~~~ 249 (662)
T 3azo_A 174 ADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---PEEAIAQAEW 249 (662)
T ss_dssp TCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---TTBCEEEEEE
T ss_pred ccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---CCceEcceEE
Confidence 554 4444 455678889999999999887754 379999998 56 33333332 3567899999
Q ss_pred cCCCCEEEEEeCCC--cEEEEEcCCCcEEEEe
Q 023018 245 SADSTLALSGSKDG--SVHMVNITTGKVCCLN 274 (288)
Q Consensus 245 ~~~~~~l~~~~~dg--~i~iwd~~t~~~~~~~ 274 (288)
+|+|+++++++.+| .|++|++.+++.....
T Consensus 250 spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 250 APDGSLIVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp CTTSCEEEEECTTSSCEEEEECTTTCCEEESS
T ss_pred CCCCeEEEEECCCCCeEEEEEECCCCceeecc
Confidence 99999888888888 6777777778765544
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=5.4e-18 Score=141.90 Aligned_cols=227 Identities=16% Similarity=0.106 Sum_probs=153.2
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEE--EecCCCEEEEE-------
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLA--FSMDGQLLASG------- 125 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~------- 125 (288)
+..+...+|...+..++|+| +++.|+.++.++.|++|++.+++....+..+...+.... ++|++++++..
T Consensus 71 ~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 71 VATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp EEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred ceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccc
Confidence 33444455666666788999 777888888889999999999887766665555554444 48899887743
Q ss_pred ---------------eCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcC-CCCEEEEecCC------CeEEEEECCcccE
Q 023018 126 ---------------GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSED------STVWMWNADRAAY 183 (288)
Q Consensus 126 ---------------~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~ 183 (288)
..++.|.+||+.+++..... .+...+..++|+| +++.|+.+... ..|.++++..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp CCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred ccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 23468999999988755444 4556789999999 99988877653 3788888866543
Q ss_pred EEEeeccC--CCeEEEEEcCCCCEEEEEeC-CC----eEEEEeCCCCceeEEEcCCCcccc---CeEEEEEcCCCCEEEE
Q 023018 184 LNMFSGHG--SSVTCGDFTPDGKTICTGSD-DA----TLRVWNPKSGENIHVIRGHPYHTE---GLTCLTISADSTLALS 253 (288)
Q Consensus 184 ~~~~~~~~--~~i~~~~~~p~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~ 253 (288)
..+..+. ..+..+.|+|+|+.|+..+. ++ .|++||+.+++....... ..+.. ....+.|+|+|+.|+.
T Consensus 229 -~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 229 -RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM-PACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp -EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE-CCEEEEEECTTSSEEEEEECCC--
T ss_pred -EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC-CCceeeeecCCCCeEccCCCccee
Confidence 3333333 35778899999998765443 22 399999998875332221 10100 0112379999988775
Q ss_pred E---------eCCCcEEEEEcCCCcEEEEe--c------------ceEEEEEeec
Q 023018 254 G---------SKDGSVHMVNITTGKVCCLN--F------------QYTCVAYDLD 285 (288)
Q Consensus 254 ~---------~~dg~i~iwd~~t~~~~~~~--~------------~~~~~~~~~d 285 (288)
. ..+..|++||+.+++..... . ....++|+||
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spD 361 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPD 361 (388)
T ss_dssp ----------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred EeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCC
Confidence 3 45678999999998765443 1 2456677776
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=2.4e-18 Score=144.29 Aligned_cols=213 Identities=11% Similarity=-0.006 Sum_probs=145.3
Q ss_pred EEEEEEcCCCCcEEEEE-eCC--CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeE
Q 023018 67 VYSVACSPTDATLVATG-GGD--DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~-~~d--g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (288)
+..++|+| +++.|+.. ..+ ..|.+|++.+++.......+......+.|+|++++|+.++.++.|++|++.+++...
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 67789999 56555544 333 468888988877654443332222337899999999999999999999999887666
Q ss_pred EeccCCCCEEE-------------------EEEcCCCCEEEEe-----cCCCeEEEEECCcccEEEEeeccCCCeEEEEE
Q 023018 144 TLEGPGGGVEW-------------------VSWHPRGHIVLAG-----SEDSTVWMWNADRAAYLNMFSGHGSSVTCGDF 199 (288)
Q Consensus 144 ~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 199 (288)
....+...... +.|+|+++.++.+ ..+..|++||+.+++..... .+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 55544432222 3457777766554 35678999999888765444 46677899999
Q ss_pred cC-CCCEEEEEeCC------CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCC
Q 023018 200 TP-DGKTICTGSDD------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITT 267 (288)
Q Consensus 200 ~p-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t 267 (288)
+| ++..|+..+.+ ..|.+||+.++.. ..+... .....+..+.|+|+|+.|+.++.+ +.|++||+.+
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEH-AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCC-CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeecc-CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 99 78877766543 3688999876543 333321 013357889999999977766543 4499999999
Q ss_pred CcEEEEe--cceEEEEEee
Q 023018 268 GKVCCLN--FQYTCVAYDL 284 (288)
Q Consensus 268 ~~~~~~~--~~~~~~~~~~ 284 (288)
++..... .... ++|+|
T Consensus 274 g~~~~l~~~~~~~-~~~s~ 291 (396)
T 3c5m_A 274 LENEEVMVMPPCS-HLMSN 291 (396)
T ss_dssp CCEEEEEECCSEE-EEEEC
T ss_pred CCeEEeeeCCCCC-CCccC
Confidence 8765543 3333 66766
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=2.4e-16 Score=142.26 Aligned_cols=209 Identities=12% Similarity=0.075 Sum_probs=148.7
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeC-CC----eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCe------
Q 023018 62 GHSDEVYSVACSPTDATLVATGGG-DD----KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL------ 130 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~------ 130 (288)
+|...+..++|+| ++++||.+.. .| .|++||+.+++.+.....+ ..+..++|+|+++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccc
Confidence 3555789999999 6666665543 33 8999999999876643322 23667999999999998887765
Q ss_pred ----------EEEEeCCCCcee--EEecc--CCCCEEEEEEcCCCCEEEEecC-----CCeEEEEECCc------cc-EE
Q 023018 131 ----------VQIWDPSSGNLK--CTLEG--PGGGVEWVSWHPRGHIVLAGSE-----DSTVWMWNADR------AA-YL 184 (288)
Q Consensus 131 ----------i~i~d~~~~~~~--~~~~~--~~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~-~~ 184 (288)
|++|++.+++.. ..+.. +...+..+.|+|+|++|+.++. +..|++||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 999999887632 22332 3455789999999998888764 56899999976 43 35
Q ss_pred EEeeccCCCeEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC
Q 023018 185 NMFSGHGSSVTCGDFTPDGKTICTGSDD----ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (288)
Q Consensus 185 ~~~~~~~~~i~~~~~~p~~~~l~~~~~d----g~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (288)
..+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..+. ....+..+.|++++.++++...++
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEETTTEEEEEEEETT
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEEcCCEEEEEEEECC
Confidence 555556555554 488999988776653 3699999987642 34443321 113577889998788888888887
Q ss_pred --cEEEEEcCCCcEEEEe
Q 023018 259 --SVHMVNITTGKVCCLN 274 (288)
Q Consensus 259 --~i~iwd~~t~~~~~~~ 274 (288)
.|++|++.+|+.+..+
T Consensus 358 ~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp EEEEEEEETTTCCEEEEE
T ss_pred EEEEEEEECCCCCEEEec
Confidence 4677788788876665
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=1.4e-16 Score=131.34 Aligned_cols=200 Identities=16% Similarity=0.199 Sum_probs=137.7
Q ss_pred CCEEEEEEcCCCCcEEEEEeCC---C--eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCC-----------
Q 023018 65 DEVYSVACSPTDATLVATGGGD---D--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD----------- 128 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~d---g--~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------- 128 (288)
..+..++|+| +++.||..+.+ + .|.+|++.+++.......+ . +..++|+|+++.|+.++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 4588899999 66666655543 3 4788888887765555433 3 8999999999988887632
Q ss_pred ----------------CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCC---------eEEEEECCcccE
Q 023018 129 ----------------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS---------TVWMWNADRAAY 183 (288)
Q Consensus 129 ----------------g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~ 183 (288)
..|++|++.+++.+..+.. . .+..++|+|+| +++++..++ .|+++| +++
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~- 209 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK- 209 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc-
Confidence 5799999988876344444 3 68899999999 777775542 455555 444
Q ss_pred EEEeeccCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeEEEcCCCccccCeEE-EEEcCCCCEEEEE
Q 023018 184 LNMFSGHGSSVTCGDFTPDGKTICTGSDD--------ATLRVWNPKSGENIHVIRGHPYHTEGLTC-LTISADSTLALSG 254 (288)
Q Consensus 184 ~~~~~~~~~~i~~~~~~p~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~ 254 (288)
...+..+ ..+..+ +|+|++|+.++.+ ..|.+|| +++....+.. +...+.. +.|+ ++ +++++
T Consensus 210 ~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 210 EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDE---VDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTT---CCSEEEEEEEET-TE-EEEEE
T ss_pred eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEecccc---CCcccCCccEEc-Cc-EEEEE
Confidence 3334334 455544 9999998877744 4688888 5544332222 4556775 8999 88 88899
Q ss_pred eCCCcEEEEEcCCCcEEEEe---cceEEEEEee
Q 023018 255 SKDGSVHMVNITTGKVCCLN---FQYTCVAYDL 284 (288)
Q Consensus 255 ~~dg~i~iwd~~t~~~~~~~---~~~~~~~~~~ 284 (288)
+.++.+++| +.+++..... ..+.++++++
T Consensus 280 ~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 280 FEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE 311 (347)
T ss_dssp EETTEEEEE-EESSSEEEEECSSSEEEEEEESS
T ss_pred ecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC
Confidence 999999999 8877765554 2344555544
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=2.4e-17 Score=149.43 Aligned_cols=215 Identities=9% Similarity=0.030 Sum_probs=148.7
Q ss_pred CCCeeEeecCCCC-----EEEEEEcCCCCcEEEEEeCC---------CeEEEEEccCCeeeEeeccccCcEEEEEEecCC
Q 023018 54 DDSTHIFSGHSDE-----VYSVACSPTDATLVATGGGD---------DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDG 119 (288)
Q Consensus 54 ~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~ 119 (288)
++....+.+|... ...++|+| +++.|+.++.+ +.+.+||+.+++.. .+..|...+...+|+|+|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG 123 (740)
T 4a5s_A 46 GNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVG 123 (740)
T ss_dssp CCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSST
T ss_pred CceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCC
Confidence 3445566666532 24478999 77777777765 56789999998754 456677889999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEec-cCCCCE-----------------EEEEEcCCCCEEEEecCCC----------
Q 023018 120 QLLASGGLDGLVQIWDPSSGNLKCTLE-GPGGGV-----------------EWVSWHPRGHIVLAGSEDS---------- 171 (288)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i-----------------~~~~~~~~~~~l~~~~~dg---------- 171 (288)
+.||.+. ++.|++|++.+++..+... ++...+ ..+.|+|+|+.|+.++.|.
T Consensus 124 ~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 124 HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEe
Confidence 9998885 6899999998877544221 222222 3589999999999875221
Q ss_pred --------------------------eEEEEECCc---cc--EEEEee------ccCCCeEEEEEcCCCCEEEEEeC---
Q 023018 172 --------------------------TVWMWNADR---AA--YLNMFS------GHGSSVTCGDFTPDGKTICTGSD--- 211 (288)
Q Consensus 172 --------------------------~i~i~d~~~---~~--~~~~~~------~~~~~i~~~~~~p~~~~l~~~~~--- 211 (288)
.|++||+.+ ++ ....+. ++...+..++|+|+|+.++....
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 588899988 62 222333 26677899999999997665543
Q ss_pred -CCeEEEEeCCCCc----e--eEEE--cCCCccccCe-----EEEEEcCCCCEEE-EEeC-C--CcEEEEEcCCCcEEEE
Q 023018 212 -DATLRVWNPKSGE----N--IHVI--RGHPYHTEGL-----TCLTISADSTLAL-SGSK-D--GSVHMVNITTGKVCCL 273 (288)
Q Consensus 212 -dg~i~i~d~~~~~----~--~~~~--~~~~~~~~~v-----~~~~~~~~~~~l~-~~~~-d--g~i~iwd~~t~~~~~~ 273 (288)
+..|++||+.+++ + ...+ .. +...+ ....|+|||+.|+ ..+. + ..|++|++.+++....
T Consensus 283 ~~~~i~~~d~~tg~~~~~~~~~~~l~~~~---~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 283 NYSVMDICDYDESSGRWNCLVARQHIEMS---TTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp TEEEEEEEEEETTTTEEEECGGGCEEEEC---SSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred CEEEEEEEECCCCccccceeEEEEeeecc---CCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEec
Confidence 2379999998886 1 1111 21 22222 3678999999876 5553 3 3688899988776654
Q ss_pred e
Q 023018 274 N 274 (288)
Q Consensus 274 ~ 274 (288)
.
T Consensus 360 T 360 (740)
T 4a5s_A 360 T 360 (740)
T ss_dssp C
T ss_pred c
Confidence 4
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=2.8e-15 Score=122.89 Aligned_cols=221 Identities=9% Similarity=-0.020 Sum_probs=160.3
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecccc-----CcEEEEEEecCCCEEEEEe--
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHK-----DSVSSLAFSMDGQLLASGG-- 126 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-- 126 (288)
.+.+..+. .......+++++ ++.++++...++.|.+||..+++....+.... .....+++ . +..|+++.
T Consensus 74 ~~~~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~ 149 (328)
T 3dsm_A 74 FKEVGRIT-GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWS 149 (328)
T ss_dssp CCEEEEEE-CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECT
T ss_pred cEEEEEcC-CCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCC
Confidence 44555554 345688999988 55665555478999999999998877665332 13456777 3 44555554
Q ss_pred CCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCC----------CeEEEEECCcccEEEEeecc-CCCeE
Q 023018 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----------STVWMWNADRAAYLNMFSGH-GSSVT 195 (288)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~i~ 195 (288)
.++.|.++|+.+++....+.... ....++++|+|++++++..+ +.|.++|..+++....+... ...+.
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~ 228 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPS 228 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCE
T ss_pred CCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCce
Confidence 48899999999998888776543 46788999999877777655 78999999998877766532 34689
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC-CCCEEEEE----eCCCcEEEEEcCCCcE
Q 023018 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSG----SKDGSVHMVNITTGKV 270 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~----~~dg~i~iwd~~t~~~ 270 (288)
.++++|++++|+++.. .|.+||+.+++.... ............++++| ++.++++. ..++.|.+||.. |+.
T Consensus 229 ~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN--DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp EEEECTTSCEEEEESS--SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred eEEEecCCCEEEEEcc--EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 9999999999988765 899999988765311 10010145688999999 56666666 568999999998 998
Q ss_pred EEEe---cceEEEEEe
Q 023018 271 CCLN---FQYTCVAYD 283 (288)
Q Consensus 271 ~~~~---~~~~~~~~~ 283 (288)
+..+ .....++|-
T Consensus 305 ~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 305 IDEFYVGIIPGAFCWK 320 (328)
T ss_dssp EEEEEEEESEEEEEEE
T ss_pred EEEEEeccCcceEEEe
Confidence 8877 445566554
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.74 E-value=2.2e-15 Score=119.67 Aligned_cols=215 Identities=12% Similarity=-0.000 Sum_probs=149.1
Q ss_pred CEEEEEEcCCCCcEEE-EEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE
Q 023018 66 EVYSVACSPTDATLVA-TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (288)
...++++.+ ++.+++ +.+.++.|.+|+..+.........+...+.++++.++++++++.. ++.|.+|+.........
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 678999999 666776 547789999999766543322222334678899999998666555 88999999876544322
Q ss_pred eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q 023018 145 LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE 224 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~ 224 (288)
.......+..++++++++++++...++.|.+|+..+.............+..++++|+++.+++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 22233568999999999988887778999999876554333222233467889999999877776678899999987655
Q ss_pred eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 225 NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
....... ....+..++++++|.++++...++.|.+|+..+....... ..+.+++++++
T Consensus 183 ~~~~~~~---~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 183 QVVLPFT---DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD 244 (270)
T ss_dssp EEECCCS---SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT
T ss_pred eEeeccc---CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC
Confidence 4332221 2356889999999988777777889999999776544432 34567777654
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=5.6e-17 Score=135.87 Aligned_cols=197 Identities=14% Similarity=0.053 Sum_probs=137.3
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEE-------------------EEEecCCCEEEEE---
Q 023018 68 YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSS-------------------LAFSMDGQLLASG--- 125 (288)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~--- 125 (288)
..+.|+| +++.|+.++.++.|++|++.+++.......+...... +.|+|+++.++.+
T Consensus 84 ~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 84 FGGFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TTCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred ccceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 3478999 7778888888889999999988765555434332222 3456777765544
Q ss_pred --eCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcC-CCCEEEEecCC------CeEEEEECCcccEEEEeecc-CCCeE
Q 023018 126 --GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSED------STVWMWNADRAAYLNMFSGH-GSSVT 195 (288)
Q Consensus 126 --~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~i~ 195 (288)
..+..|.+||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|.+|++..++........ ...+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCT 241 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEE
T ss_pred cCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcccc
Confidence 35678999999988765554 3556789999999 78877766543 46899998765533322211 23578
Q ss_pred EEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC-CCCEEEEEe--------------
Q 023018 196 CGDFTPDGKTICTGSDD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGS-------------- 255 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-------------- 255 (288)
.+.|+|+|++|+.++.+ +.|++||+.+++....... . ... +.|+| +|++|++++
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~----~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM----P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC----C-SEE-EEEECSSSSEEEEEECCC----------C
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC----C-CCC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 89999999987776543 4499999988865443321 1 123 88999 999888754
Q ss_pred --CCCcEEEEEcCCCcEEE
Q 023018 256 --KDGSVHMVNITTGKVCC 272 (288)
Q Consensus 256 --~dg~i~iwd~~t~~~~~ 272 (288)
.++.|++||+.+++...
T Consensus 316 ~~~~~~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQK 334 (396)
T ss_dssp CCCCCEEEEEETTTTBCCE
T ss_pred cCCCCcEEEEecccCceEE
Confidence 34789999999887543
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.73 E-value=2.3e-16 Score=130.67 Aligned_cols=174 Identities=11% Similarity=0.010 Sum_probs=135.9
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-----------eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----------WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
++..+++++ ...++++|+.++ +++|++...+ ..... .+.. |+.++| ++++|+++ .++.|++|
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 589999999 666788888874 6669976433 11222 3556 999999 88999998 78999999
Q ss_pred eCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCe
Q 023018 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~ 214 (288)
|+.+.........+..++.++.+.+. .+++++.||.|.+||+.++.... +...|++++|+|.| ++.|..||.
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 99887766666667778888887654 38889999999999999877643 34689999999999 788999999
Q ss_pred EEEEeCCCCce--eEEEcCCC------ccccCeEEEEEcCCCCEEEEE
Q 023018 215 LRVWNPKSGEN--IHVIRGHP------YHTEGLTCLTISADSTLALSG 254 (288)
Q Consensus 215 i~i~d~~~~~~--~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~ 254 (288)
+++|+...+.. ...+...+ .+...|.++.|.+++.+|++-
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 99999877664 55563211 256789999999999888863
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=6.1e-16 Score=126.85 Aligned_cols=195 Identities=11% Similarity=0.119 Sum_probs=145.6
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (288)
..|.+++|++ +...++..+.++.++.| .++....+..+...+.+++|++++++++++..++.|.+||..+++....
T Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSG-KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCG-GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecC-CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 4577788888 55666666778889999 3455666666667789999999999878888899999999988876655
Q ss_pred eccCCCCEEEEEEcCCCCEEEEecCC----CeEEEEECCcccEEEEee--ccCCCeEEEEEcCCCCEEEEEeC------C
Q 023018 145 LEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGSD------D 212 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~p~~~~l~~~~~------d 212 (288)
...+...+.+++++|+++++++...+ +.|.+||..++.....+. .....+..++++|+|+++++... .
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 44456779999999999988877766 689999998776543332 23457899999999987776653 3
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCC
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGSVHMVNITT 267 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~t 267 (288)
+.|..||..+++...... ....+..++|+|+++.|+ +.+.++.|++|++.+
T Consensus 162 ~~l~~~~~~~~~~~~~~~----~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPIIQ----NISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp EEEEEECTTSCCEEEEEE----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ceEEEEeCCCCEEEEeec----CCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 567778876554433222 334578899999998665 445678999999964
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=3.6e-15 Score=122.18 Aligned_cols=211 Identities=10% Similarity=-0.000 Sum_probs=156.2
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (288)
.....+++. ++.++++...++.|.+||..+++.+.++. .......++++++++.+++...++.|.+||+.+++....
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 346777775 45666677778999999999999988886 345678999999885444443789999999999988777
Q ss_pred eccCC-----CCEEEEEEcCCCCEEEEec-CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCC------
Q 023018 145 LEGPG-----GGVEWVSWHPRGHIVLAGS-EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD------ 212 (288)
Q Consensus 145 ~~~~~-----~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d------ 212 (288)
+.... .....+++ ..++.+++.. .++.|.++|+.+++.+..+... .....+.++|+|++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred EEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCcc
Confidence 66433 13556777 3444444433 4889999999999888777643 345788999999877766554
Q ss_pred ----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe------cceEEEEE
Q 023018 213 ----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN------FQYTCVAY 282 (288)
Q Consensus 213 ----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~------~~~~~~~~ 282 (288)
+.|.+||..+++....+... .......++++|+++.|+++.. .|.+||+.+++..... ..+.++++
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~~~--~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~v 274 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFKFK--LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTV 274 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEECC--TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEE
T ss_pred ccCCceEEEEECCCCeEEEEEecC--CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEE
Confidence 78999999988877666532 1246889999999999888765 8999999998864221 34667777
Q ss_pred ee
Q 023018 283 DL 284 (288)
Q Consensus 283 ~~ 284 (288)
+|
T Consensus 275 dp 276 (328)
T 3dsm_A 275 NP 276 (328)
T ss_dssp CT
T ss_pred cC
Confidence 66
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=1.5e-14 Score=116.71 Aligned_cols=203 Identities=13% Similarity=0.119 Sum_probs=147.5
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccc----cCcEEEEEEecCCCEEEEE----e--
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGH----KDSVSSLAFSMDGQLLASG----G-- 126 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~----~-- 126 (288)
...+..+...+.+++++| ++.++++...++.|.+|+..+++........ ...+.+++++|+|+++++. +
T Consensus 61 ~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~ 139 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDK 139 (296)
T ss_dssp EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHC
T ss_pred eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccc
Confidence 566667788899999999 7778777777789999999777754433221 2345689999999988773 2
Q ss_pred -----------CCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECC-cccE---EEEeeccC
Q 023018 127 -----------LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAY---LNMFSGHG 191 (288)
Q Consensus 127 -----------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~ 191 (288)
..+.|..++.. ++ ...+..+......++|+|+++.+++.+.++.|++|++. +++. ...+..+.
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 217 (296)
T 3e5z_A 140 PEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEP 217 (296)
T ss_dssp GGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSS
T ss_pred ccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCC
Confidence 13466666655 44 33444555678999999999988777888999999986 4443 23333345
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEE-cCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTI-SADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 192 ~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
..+..++++++|+++++. ++.|.+||.. ++.+..+.. +.. +.+++| .|+++.|++++.+ .+..++..+.++
T Consensus 218 ~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~---~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 218 GKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT---PQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp SCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC---SSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred CCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC---CCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 567789999999866655 7899999986 777777765 334 888999 5888888888765 566667777654
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=2.5e-15 Score=119.39 Aligned_cols=201 Identities=9% Similarity=-0.003 Sum_probs=146.7
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 144 (288)
..+.++++.+ ++.++++.. ++.|.+|+................+..+++.++++++++...++.|.+|+..+......
T Consensus 67 ~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 67 YQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred CCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 4678899999 566666555 88999999876543322222335678999999998777777788999998665544332
Q ss_pred eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q 023018 145 LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE 224 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~ 224 (288)
.......+..++++++++++++...++.|.+|+................+..++++++|..+++...++.|.+|+.....
T Consensus 145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 22333457889999999988777778999999987766544333333678999999999777777678899999986543
Q ss_pred eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 225 NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
.. .+... +...+.+++++++|+++++...++.|+++++...+.
T Consensus 225 ~~-~~~~~--~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 225 ST-VLPFT--GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CE-ECCCC--SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ce-eeccC--CCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 32 22211 235689999999999888888899999999876543
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.72 E-value=1.1e-14 Score=116.20 Aligned_cols=215 Identities=13% Similarity=0.079 Sum_probs=166.6
Q ss_pred CCCCeeEeecCC-CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccc-cCcEEEEEEecCCCEEEEEeC-CC
Q 023018 53 PDDSTHIFSGHS-DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGH-KDSVSSLAFSMDGQLLASGGL-DG 129 (288)
Q Consensus 53 ~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-dg 129 (288)
..+.+..+..+. ..+.++++.| ++++++ +.++.|+.||. +++.+..+..+ ...+.++.+.++|+++++.+. ++
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~ 99 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS 99 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred CCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC
Confidence 566677777776 4789999999 777887 34688999998 78888888764 357889999999999998887 78
Q ss_pred eEEEEeCCCCceeEEecc------CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCC
Q 023018 130 LVQIWDPSSGNLKCTLEG------PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (288)
Q Consensus 130 ~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~ 203 (288)
.|..++. +++.+..+.. +......+++.++|+++++...++.|..||.. ++.+.++... ..+..+...+++
T Consensus 100 ~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g 176 (276)
T 3no2_A 100 TILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNG 176 (276)
T ss_dssp EEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTS
T ss_pred EEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCC
Confidence 8888885 6777666542 11234566788999999999999999999997 9999888764 345667788999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCCc---cccCeEEEEEcCCCCEEEEEeCC--------CcEEEEEc-CCCcEE
Q 023018 204 KTICTGSDDATLRVWNPKSGENIHVIRGHPY---HTEGLTCLTISADSTLALSGSKD--------GSVHMVNI-TTGKVC 271 (288)
Q Consensus 204 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~-~t~~~~ 271 (288)
+.+++++.++.|..+|..+|+.+..+..... ....+..+...++|.++++.... +..+++.+ .+|+++
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 256 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 256 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEE
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEE
Confidence 9999998888999999999999888864211 12237788889999988887421 24466666 688888
Q ss_pred EEe
Q 023018 272 CLN 274 (288)
Q Consensus 272 ~~~ 274 (288)
..+
T Consensus 257 W~~ 259 (276)
T 3no2_A 257 WQL 259 (276)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.72 E-value=8e-14 Score=112.54 Aligned_cols=221 Identities=12% Similarity=0.047 Sum_probs=154.2
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS 138 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 138 (288)
.+..+..-.-+..|+|.++.++++....+.|+.|+..+++. ..+. ....+.+++++++++++++ . ++.|.+||..+
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTT
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCC
Confidence 34445556678999997778888888889999999987664 2333 4567899999999995544 4 56799999988
Q ss_pred CceeEEecc----CCCCEEEEEEcCCCCEEEEecC-----------CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCC
Q 023018 139 GNLKCTLEG----PGGGVEWVSWHPRGHIVLAGSE-----------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG 203 (288)
Q Consensus 139 ~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~ 203 (288)
++....... ....+..++++|+|+++++... .+.|+.++.. ++... +.........++|+|++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDH 160 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTS
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCC
Confidence 765443322 2235789999999997665422 2345555543 33322 22333456899999999
Q ss_pred CEEEEE-eCCCeEEEEeC--CCCcee--EEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----
Q 023018 204 KTICTG-SDDATLRVWNP--KSGENI--HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN---- 274 (288)
Q Consensus 204 ~~l~~~-~~dg~i~i~d~--~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~---- 274 (288)
+.|+.+ +..+.|.+|++ .++... ..+.........+..++++++|++.++....+.|.+||..+|+.+..+
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 987554 45788999986 455432 222221113356788999999988888777889999999999988776
Q ss_pred cceEEEEEe-ec
Q 023018 275 FQYTCVAYD-LD 285 (288)
Q Consensus 275 ~~~~~~~~~-~d 285 (288)
..+.+++|+ |+
T Consensus 241 ~~~t~~~f~g~d 252 (297)
T 3g4e_A 241 DKTTSCCFGGKN 252 (297)
T ss_dssp SBEEEEEEESGG
T ss_pred CCceEEEEeCCC
Confidence 357888887 54
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=3.4e-13 Score=108.36 Aligned_cols=217 Identities=12% Similarity=0.126 Sum_probs=156.1
Q ss_pred eecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEe-eccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC
Q 023018 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS 138 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 138 (288)
+..+...+.++++.+ ++.++++...++.|.+|+.. ++.... +..+...+.++++.+++.++++...++.|..|+..
T Consensus 10 ~~~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CCSSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 344556899999999 66777666667899999988 543322 22345678999999999877777778899999976
Q ss_pred CceeEEec--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEE-eeccCCCeEEEEEcCCCCEEEEEeCCCeE
Q 023018 139 GNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (288)
Q Consensus 139 ~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~~~~dg~i 215 (288)
++. ..+. .....+..+++.++++++++...++.|.+||. +++.... .......+..+++.+++..+++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 332 2222 24457899999999988888877899999998 5543322 22344578999999999877777677899
Q ss_pred EEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe-----cceEEEEEeec
Q 023018 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN-----FQYTCVAYDLD 285 (288)
Q Consensus 216 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~-----~~~~~~~~~~d 285 (288)
..||. +++... +... .....+..+++++++.++++...++.|.+|+. +++..... ..+.+++++++
T Consensus 165 ~~~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIP-TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp EEECT-TCCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST
T ss_pred EEEcC-CCcEEE-eeCC-CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC
Confidence 99998 665443 2211 13456889999999998777767889999999 77755432 34556666554
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=3.1e-14 Score=124.40 Aligned_cols=195 Identities=9% Similarity=0.025 Sum_probs=152.3
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCC--CCceeEEeccCCCCEE
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS--SGNLKCTLEGPGGGVE 153 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~i~ 153 (288)
+..++++...++.|.++|..+++.+.++.. ...+..+.|+|+++++++++.++.|.+||+. +++.+..+.... ...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence 456777788899999999999999888874 3456789999999999999999999999996 788887777544 478
Q ss_pred EEEEc----CCCCEEEEecC-CCeEEEEECCcccEEEEeecc-----------CCCeEEEEEcCCCCEE-EEEeCCCeEE
Q 023018 154 WVSWH----PRGHIVLAGSE-DSTVWMWNADRAAYLNMFSGH-----------GSSVTCGDFTPDGKTI-CTGSDDATLR 216 (288)
Q Consensus 154 ~~~~~----~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~p~~~~l-~~~~~dg~i~ 216 (288)
.++|+ |+|+++++++. +++|.++|..+.+++..+... ...+..+..++++..+ +.....|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 99999 69998887765 589999999999888776532 1257788889876654 4455679999
Q ss_pred EEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEEe
Q 023018 217 VWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 217 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t~~~~~~~ 274 (288)
++|......+...... .......+.|+|+++++++++ .++.|.++|+.+++++..+
T Consensus 324 ~vd~~~~~~~~v~~i~--~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 324 LVDYTDLNNLKTTEIS--AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp EEETTCSSEEEEEEEE--CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEecCCCccceeeeee--ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 9998765433222111 334577889999999887665 5789999999999988765
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=2.3e-15 Score=135.49 Aligned_cols=207 Identities=12% Similarity=0.055 Sum_probs=140.3
Q ss_pred cCCCCEEEEEEcCCCCcEEE-----EEeCCCeEEEEEccCCeee-EeeccccCcEEEEEEecCCCEEEEEeCCCe-----
Q 023018 62 GHSDEVYSVACSPTDATLVA-----TGGGDDKGFFWRINQGDWA-SEIQGHKDSVSSLAFSMDGQLLASGGLDGL----- 130 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~-----~~~~dg~i~iw~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~----- 130 (288)
+|...+..++|+| ++++|| .|+.+..|++||+.+++.+ .... .......++|+|+|+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4666799999999 666666 3344568999999998764 2111 1111257899999999999988766
Q ss_pred --------EEEEeCCCCce--eEEec--cCCCCEEEEEEcCCCCEEEEecCCC----eEEEEECCcccEEEEeeccCCCe
Q 023018 131 --------VQIWDPSSGNL--KCTLE--GPGGGVEWVSWHPRGHIVLAGSEDS----TVWMWNADRAAYLNMFSGHGSSV 194 (288)
Q Consensus 131 --------i~i~d~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~i 194 (288)
|++|++.++.. ...+. .+...+..+.|+|+|++|++++.++ .|++|+..++. ...+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCce
Confidence 99999988762 22333 3445788999999999888877665 67888765554 33444455556
Q ss_pred EEEEEcCCCCEEEEEe---CCCeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-CC
Q 023018 195 TCGDFTPDGKTICTGS---DDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT-TG 268 (288)
Q Consensus 195 ~~~~~~p~~~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-t~ 268 (288)
....+ +++.+++.+. .++.|.+||+.++.. ...+..+. ....+..++|+ ++.++++...++..++|.+. +|
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 66666 5666444443 257899999987653 23333221 24457788888 67788888889988887665 45
Q ss_pred cEEEEe
Q 023018 269 KVCCLN 274 (288)
Q Consensus 269 ~~~~~~ 274 (288)
+....+
T Consensus 352 ~~~~~l 357 (695)
T 2bkl_A 352 KPVRTV 357 (695)
T ss_dssp CEEEEC
T ss_pred CeeEEe
Confidence 555544
No 193
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=1.6e-14 Score=119.90 Aligned_cols=196 Identities=10% Similarity=0.100 Sum_probs=132.1
Q ss_pred CCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe----------CCCeEEEEeCCCCceeEEeccC------
Q 023018 85 GDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCTLEGP------ 148 (288)
Q Consensus 85 ~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~------ 148 (288)
.|+.|++||..+++.+..+..+..+ .++|+|++++++++. .++.|.+||+.+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 3689999999999988888766555 899999999998886 2578999999999888777643
Q ss_pred CCCEEEEEEcCCCCEEEEecC--CCeEEEEECCcccEEEE-eeccCCCeEEEEEcCCC-CEEEEEeCCCeEEEE------
Q 023018 149 GGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDG-KTICTGSDDATLRVW------ 218 (288)
Q Consensus 149 ~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~p~~-~~l~~~~~dg~i~i~------ 218 (288)
......++++|+|++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.||.+.+|
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 234678999999999998864 58999999999988776 44211 1112333432 333444444444444
Q ss_pred ------------------------------------------eCCCCce--eEEEcCCC-------ccccCeEEEEEcCC
Q 023018 219 ------------------------------------------NPKSGEN--IHVIRGHP-------YHTEGLTCLTISAD 247 (288)
Q Consensus 219 ------------------------------------------d~~~~~~--~~~~~~~~-------~~~~~v~~~~~~~~ 247 (288)
|+..... ...+.... ........++++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 4332211 01110000 00011112688999
Q ss_pred CCEEEEEeC-----------CCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 248 STLALSGSK-----------DGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 248 ~~~l~~~~~-----------dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
+..++++.. .+.|.+||+.+++.+..+ . ..+++|+||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spd 315 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQ 315 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETT
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCC
Confidence 887776543 348999999999999887 4 788888876
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.67 E-value=1.7e-12 Score=104.20 Aligned_cols=202 Identities=8% Similarity=-0.010 Sum_probs=146.8
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCcee
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK 142 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (288)
+...+.++++.+ ++.++++...++.|..|+.........+......+..+++.+++.++++...++.|.+|+. +++..
T Consensus 55 ~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 55 PDAKVMCLTISS-DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 456799999998 6777777766789999997632212222224557889999999988777777889999998 55543
Q ss_pred EE-eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEE-eeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeC
Q 023018 143 CT-LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNP 220 (288)
Q Consensus 143 ~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~ 220 (288)
.. .......+..+++.++++++++...++.|..||. +++.... .......+..+++.+++.++++...++.|.+||.
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 32 2334456899999999988888777899999998 6654432 2234456889999999987776666889999999
Q ss_pred CCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
++... .+... .....+.+++++++|+++++...++.|.+|+. +++..
T Consensus 212 -~g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 258 (299)
T 2z2n_A 212 -SGEIT-EFKIP-TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIE 258 (299)
T ss_dssp -TCCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEE
T ss_pred -CCcEE-EEECC-CCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceE
Confidence 66543 33221 13467889999999987776667889999998 55543
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=2e-14 Score=118.35 Aligned_cols=184 Identities=9% Similarity=0.087 Sum_probs=128.1
Q ss_pred EEEEEEcCCCCcEEEEEeC---------------------------CCeEEEEEccCCeeeEeeccccCcEEEEEEecCC
Q 023018 67 VYSVACSPTDATLVATGGG---------------------------DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDG 119 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~---------------------------dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~ 119 (288)
+..++|+| +++.|+.++. ...|++|++.+++.+..+.. . .+..+.|+|++
T Consensus 106 ~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE
T ss_pred ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe
Confidence 99999999 5666655542 25799999988876455544 3 78899999999
Q ss_pred CEEEEEeCCC-------eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCC--------CeEEEEECCcccEE
Q 023018 120 QLLASGGLDG-------LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED--------STVWMWNADRAAYL 184 (288)
Q Consensus 120 ~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~ 184 (288)
+++++..++ ...||.+.+++. ..+..+ ..+..+ +|+|+.|+.++.+ ..|++|| +++..
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~ 255 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM 255 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE
T ss_pred -EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceE
Confidence 777775542 334444434443 333333 445544 9999988877643 4688888 55555
Q ss_pred EEeeccCCCeEE-EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcE-EE
Q 023018 185 NMFSGHGSSVTC-GDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSV-HM 262 (288)
Q Consensus 185 ~~~~~~~~~i~~-~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i-~i 262 (288)
.....+...+.. +.|+ ++ ++++++.++.+++| +.+++....+. +...|.+++|+| .++++++.++.. .+
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~----~~~~v~~~~~s~--~~~~~~~~~~~~~~l 326 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAK----GRHWIMGFDVDE--IVVYLKETATRLREL 326 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEEC----SSSEEEEEEESS--SEEEEEECSSSCCEE
T ss_pred eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEec----CCCeEEeeeeeC--cEEEEEcCCCChHHh
Confidence 545556677886 8999 88 88899999999999 87665543333 356788999999 677777777665 77
Q ss_pred EEcCCCcE
Q 023018 263 VNITTGKV 270 (288)
Q Consensus 263 wd~~t~~~ 270 (288)
|.+. ++.
T Consensus 327 ~~~~-g~~ 333 (347)
T 2gop_A 327 FTWD-GEE 333 (347)
T ss_dssp EEES-SSE
T ss_pred eEeC-CcE
Confidence 7776 653
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=2.5e-13 Score=114.53 Aligned_cols=204 Identities=14% Similarity=0.120 Sum_probs=143.4
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCC--eEEEEeCCCCcee
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLK 142 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~ 142 (288)
.....|+|++ ++.++++...++.|++|+..++........... .. ++|+++++.|+++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 3578999998 677887877789999999988776655544332 33 99999999988888765 7999988766554
Q ss_pred EEe----ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEE----eeccCCC--eEEEEEcCC-CCEEEEEeC
Q 023018 143 CTL----EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM----FSGHGSS--VTCGDFTPD-GKTICTGSD 211 (288)
Q Consensus 143 ~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~--i~~~~~~p~-~~~l~~~~~ 211 (288)
..+ ......+.+++++|++..|+++..++.|+.||..++..... ..+.... ...++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 444 22445678899999555555577789999999987653222 1122221 238999995 444555556
Q ss_pred CCeEEEEeCCCCceeEEEcCCC------------ccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEE
Q 023018 212 DATLRVWNPKSGENIHVIRGHP------------YHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVCCL 273 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t~~~~~~ 273 (288)
.+.|+.|+.... ...+.+.. ........++++|+|+++++-. .++.|+.|++.+|+....
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 789999997643 33333211 0123478999999999877777 789999999888876543
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=1.5e-13 Score=111.43 Aligned_cols=221 Identities=8% Similarity=0.064 Sum_probs=150.7
Q ss_pred eecCCCCEEEEEEcCCCCcEEEE-------EeCCCeEEEEEccCCeeeEeec----cccCcEEEEEEecC-CCEEEEEeC
Q 023018 60 FSGHSDEVYSVACSPTDATLVAT-------GGGDDKGFFWRINQGDWASEIQ----GHKDSVSSLAFSMD-GQLLASGGL 127 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~-------~~~dg~i~iw~~~~~~~~~~~~----~~~~~i~~~~~~~~-~~~l~~~~~ 127 (288)
+...-....+++|.+ ++.++++ +..++.|.+|+..+++...... ++...+.+++++++ ++++++. .
T Consensus 13 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~ 90 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-M 90 (314)
T ss_dssp EECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-T
T ss_pred hhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-C
Confidence 344445678999998 6677777 5778999999988776543222 24567899999999 6544444 4
Q ss_pred CCeEEEEeCCCCceeEE-ecc----CCCCEEEEEEcCCCCEEEEecCC---------------CeEEEEECCcccEEEEe
Q 023018 128 DGLVQIWDPSSGNLKCT-LEG----PGGGVEWVSWHPRGHIVLAGSED---------------STVWMWNADRAAYLNMF 187 (288)
Q Consensus 128 dg~i~i~d~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~ 187 (288)
.+.|.+|+.. ++.... ... ....+.+++++++++++++...+ +.|..|+.. ++.....
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 4579999988 665433 221 12357899999999888777654 578888875 5443332
Q ss_pred eccCCCeEEEEEc----CCCCEEEEE-eCCCeEEEEeCC-CCcee--EEEcCCCccc-cCeEEEEEcCCCCEEEEEeCCC
Q 023018 188 SGHGSSVTCGDFT----PDGKTICTG-SDDATLRVWNPK-SGENI--HVIRGHPYHT-EGLTCLTISADSTLALSGSKDG 258 (288)
Q Consensus 188 ~~~~~~i~~~~~~----p~~~~l~~~-~~dg~i~i~d~~-~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg 258 (288)
.+......++|+ |+++.|+++ ..++.|.+||+. ++... ..+.....+. ..+..++++++|+++++...++
T Consensus 169 -~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 169 -TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp -EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred -cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 233456889999 999776655 467899999976 44321 1222111122 4578899999999888877889
Q ss_pred cEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 259 SVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 259 ~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
.|.+|+..+++.+..+ ..+.+++|+++
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~d 278 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ 278 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCEEEEEECTT
T ss_pred EEEEEcCCCCcEeEEEeCCCCCceeEEECCC
Confidence 9999999877765544 34667777664
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=5.6e-13 Score=110.88 Aligned_cols=207 Identities=10% Similarity=-0.041 Sum_probs=137.6
Q ss_pred CeeEeecCCCCEEEEEEcCCCCcEEEEEe----------CCCeEEEEEccCCeeeEeeccc-------cCcEEEEEEecC
Q 023018 56 STHIFSGHSDEVYSVACSPTDATLVATGG----------GDDKGFFWRINQGDWASEIQGH-------KDSVSSLAFSMD 118 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~-------~~~i~~~~~~~~ 118 (288)
.+..+.....+ .++++| +++.++++. .++.|.+||..+.+.+..+... ...-..+.|+|+
T Consensus 59 ~~~~i~~g~~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD 135 (373)
T 2mad_H 59 ILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN 135 (373)
T ss_pred EEEEecCCCCC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCC
Confidence 34455444444 999999 666666664 3678999999988877766422 122357899999
Q ss_pred CCEEEEEeC--CCeEEEEeCCCCceeEE-eccCCCCEEEEEEcCCC-CEEEEecCCCe----------------------
Q 023018 119 GQLLASGGL--DGLVQIWDPSSGNLKCT-LEGPGGGVEWVSWHPRG-HIVLAGSEDST---------------------- 172 (288)
Q Consensus 119 ~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~---------------------- 172 (288)
|++|+++.. ++.|.++| .+++.+.. +..... +.+.|.+ +.+++.+.||.
T Consensus 136 G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 136 NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC----YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce----EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 999998874 57899999 99988777 543221 1222221 22233333344
Q ss_pred -------------------------EEEEECCccc--EEEEeec----------cCCCeEEEEEcCCCCEEEEEeC----
Q 023018 173 -------------------------VWMWNADRAA--YLNMFSG----------HGSSVTCGDFTPDGKTICTGSD---- 211 (288)
Q Consensus 173 -------------------------i~i~d~~~~~--~~~~~~~----------~~~~i~~~~~~p~~~~l~~~~~---- 211 (288)
+.+.|+.... .+..+.. .......+.++|++++|+++..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 4444443221 1111110 0112334778999888887653
Q ss_pred ------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCCCcEEEEe
Q 023018 212 ------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 212 ------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iwd~~t~~~~~~~ 274 (288)
.+.|.++|+.+++.+..+.. ......+.|+|||+ +|+++. .++.|.+||+.+++.++.+
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv~~i~~----g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTSSQISL----GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccccCCCCeEEEEECCCCEEEEEEEC----CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 35799999999998888863 34678999999999 777776 4899999999999999884
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.65 E-value=2.8e-12 Score=104.84 Aligned_cols=218 Identities=17% Similarity=0.062 Sum_probs=148.6
Q ss_pred eecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCC
Q 023018 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (288)
+.....-..+.+|+|.++.++++...++.|..|+..+++.. .+. ....+.+++|+++++++++. .+ .|.+||..++
T Consensus 44 ~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g 119 (326)
T 2ghs_A 44 DETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATG 119 (326)
T ss_dssp ECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTC
T ss_pred eccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCC
Confidence 33333456788999966778888888899999999877643 233 34678999999999876654 44 4999999888
Q ss_pred ceeEEecc----CCCCEEEEEEcCCCCEEEEecC------CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEE
Q 023018 140 NLKCTLEG----PGGGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG 209 (288)
Q Consensus 140 ~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~ 209 (288)
+....... ....+..++++|+|+++++... .+.|+.++ +++.. .+.........++|+|+++.|+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEE
Confidence 75433321 1235889999999987665532 25677776 44433 232233456889999999987665
Q ss_pred e-CCCeEEEEeCC--CC-ce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe----cceEE
Q 023018 210 S-DDATLRVWNPK--SG-EN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN----FQYTC 279 (288)
Q Consensus 210 ~-~dg~i~i~d~~--~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~----~~~~~ 279 (288)
. .++.|.+|++. ++ .. ...+.........+..++++++|.+.++...++.|.+|+. +++.+..+ ..+.+
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~ 275 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTC 275 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEE
T ss_pred ECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEE
Confidence 4 56899999985 55 32 1222111112345678999999988777766789999998 67776655 24678
Q ss_pred EEEe-ec
Q 023018 280 VAYD-LD 285 (288)
Q Consensus 280 ~~~~-~d 285 (288)
++|+ ++
T Consensus 276 ~af~g~d 282 (326)
T 2ghs_A 276 PAFIGPD 282 (326)
T ss_dssp EEEESTT
T ss_pred EEEecCC
Confidence 8887 54
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=5.9e-14 Score=126.70 Aligned_cols=198 Identities=9% Similarity=0.011 Sum_probs=141.4
Q ss_pred EEEEEEcCCCCcEEEEEeCCCe----------------EEEEEccCCee----eEeeccccCcEEEEEEecCCCEEEEEe
Q 023018 67 VYSVACSPTDATLVATGGGDDK----------------GFFWRINQGDW----ASEIQGHKDSVSSLAFSMDGQLLASGG 126 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~dg~----------------i~iw~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 126 (288)
+..++|+| +++.|+.++.++. |++|++.+++. +.....|...+..+.|+|+|++|+.++
T Consensus 173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 56799999 6677777766655 99999987652 222233455678999999999988776
Q ss_pred C-----CCeEEEEeCCC------Cc-eeEEeccCCCCEEEEEEcCCCCEEEEecCC----CeEEEEECCccc--EEEEee
Q 023018 127 L-----DGLVQIWDPSS------GN-LKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAA--YLNMFS 188 (288)
Q Consensus 127 ~-----dg~i~i~d~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~--~~~~~~ 188 (288)
. +..|++||+.+ +. ....+..+...+.. .|+|+|+.|+..+.. +.|.+|++.++. ....+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 4 56899999976 43 34555555555554 478888877766543 469999998764 123444
Q ss_pred ccCC--CeEEEEEcCCCCEEEEEeCCCe--EEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE-e---CCCcE
Q 023018 189 GHGS--SVTCGDFTPDGKTICTGSDDAT--LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG-S---KDGSV 260 (288)
Q Consensus 189 ~~~~--~i~~~~~~p~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i 260 (288)
.+.. .+..+.|++++.++++...++. |.+|++.+++.+..+.. +...+..+.++|++..|+.. + ..+.|
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 4433 6788999977777888888884 66778877877677765 45668889999988766533 2 35789
Q ss_pred EEEEcCCCc
Q 023018 261 HMVNITTGK 269 (288)
Q Consensus 261 ~iwd~~t~~ 269 (288)
+.||+.+++
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 999999887
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=7.5e-14 Score=126.58 Aligned_cols=205 Identities=14% Similarity=0.044 Sum_probs=136.2
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeC-CC----eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCe-------
Q 023018 63 HSDEVYSVACSPTDATLVATGGG-DD----KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL------- 130 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~------- 130 (288)
|...+..++|+| ++++||.+.. .| .|++||+.+++.+.... +...+..++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 444788999999 6666655543 23 59999999988755321 2222357899999 98888876554
Q ss_pred -------EEEEeCCCCce--eEEecc--CCCCEEEEEEcCCCCEEEEecCCC-----eEEEEECCcc--cEEEEeeccCC
Q 023018 131 -------VQIWDPSSGNL--KCTLEG--PGGGVEWVSWHPRGHIVLAGSEDS-----TVWMWNADRA--AYLNMFSGHGS 192 (288)
Q Consensus 131 -------i~i~d~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~ 192 (288)
|++|++.++.. ...+.. +...+..+.|+|+|++|+..+.++ .|++||+.++ +....+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 89999987752 233333 223588999999999888877543 8999999776 31444544444
Q ss_pred CeEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCc-eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-
Q 023018 193 SVTCGDFTPDGKTICTGSDD----ATLRVWNPKSGE-NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT- 266 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~d----g~i~i~d~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~- 266 (288)
.+... ++|+++.|+..+.+ +.|.+||+.++. ....+... +...+..+.|+ ++.++++...++..++|.+.
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE--SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC--CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC--CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 45444 34889988887753 459999998742 33333322 33446677777 56777888888877776554
Q ss_pred CCcEEEEe
Q 023018 267 TGKVCCLN 274 (288)
Q Consensus 267 t~~~~~~~ 274 (288)
+|+....+
T Consensus 394 ~g~~~~~l 401 (741)
T 1yr2_A 394 DGKPAGAV 401 (741)
T ss_dssp TSCEEEEC
T ss_pred CCCceeec
Confidence 45555544
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.63 E-value=4e-13 Score=108.85 Aligned_cols=222 Identities=13% Similarity=0.062 Sum_probs=150.8
Q ss_pred CCCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
...+..+..+.......+|+|++..+++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 34455666666778899999955558888888899999987 444 3445445667899999999986666556688999
Q ss_pred EeCCCCceeEEecc----CCCCEEEEEEcCCCCEEEE----ecC-------------CCeEEEEECCcccEEEEeeccCC
Q 023018 134 WDPSSGNLKCTLEG----PGGGVEWVSWHPRGHIVLA----GSE-------------DSTVWMWNADRAAYLNMFSGHGS 192 (288)
Q Consensus 134 ~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~ 192 (288)
|+.. ++....... ....+..++++|+|+++++ |.. .+.|+.||..+++..... ...
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~ 188 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD 188 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC
Confidence 9976 553322211 1234678999999998886 432 356888888666543332 334
Q ss_pred CeEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 193 SVTCGDFTPDGKTICTGSDD------ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~d------g~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
....++|+|+++.|+++... +.|.+|++..+.. ...+... ....+..++++++|++.+ ++.+ .|.+|+
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~ 264 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDRGGWLWS-SSGT-GVCVFD 264 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECTTSCEEE-CCSS-EEEEEC
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECCCCCEEE-ecCC-cEEEEC
Confidence 56889999999988887765 6899999875431 1122111 223455788999998544 4444 599999
Q ss_pred cCCCcEEEEe---cceEEEEEeec
Q 023018 265 ITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 265 ~~t~~~~~~~---~~~~~~~~~~d 285 (288)
. +|+.+..+ ....+++|+++
T Consensus 265 ~-~g~~~~~~~~~~~~~~~~f~~d 287 (305)
T 3dr2_A 265 S-DGQLLGHIPTPGTASNCTFDQA 287 (305)
T ss_dssp T-TSCEEEEEECSSCCCEEEECTT
T ss_pred C-CCCEEEEEECCCceeEEEEeCC
Confidence 8 56766655 34566777644
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.62 E-value=6.8e-14 Score=117.39 Aligned_cols=193 Identities=17% Similarity=0.139 Sum_probs=144.1
Q ss_pred CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe----------CCCeEEEEeCCCCceeEEeccC-------C
Q 023018 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCTLEGP-------G 149 (288)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~-------~ 149 (288)
+.|.++|..+.+.+.++..-..+ .+.++|++++++++. .++.|.++|..+++.+..+... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 69999999999999998855556 799999999888775 3678999999999988877532 1
Q ss_pred CCEEEEEEcCCCCEEEEecC--CCeEEEEECCcccEEEEeeccC----------------------------CC------
Q 023018 150 GGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHG----------------------------SS------ 193 (288)
Q Consensus 150 ~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~----------------------------~~------ 193 (288)
.....+.++|+|++++++.. ++.|.+.|+.+++.+..+.... ..
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 23567899999999998864 5789999998876554432100 00
Q ss_pred ----------------------------------------------------------------eEEEEEcCCCCEEEEE
Q 023018 194 ----------------------------------------------------------------VTCGDFTPDGKTICTG 209 (288)
Q Consensus 194 ----------------------------------------------------------------i~~~~~~p~~~~l~~~ 209 (288)
...++++|+++++++.
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 0014566666766665
Q ss_pred eC----------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCCCcEEEEe---
Q 023018 210 SD----------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITTGKVCCLN--- 274 (288)
Q Consensus 210 ~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iwd~~t~~~~~~~--- 274 (288)
.. .+.|.++|+.+.+.+..+.. ......+.|+|+++ +|++.. .++.|.++|+.+++.++.+
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~v 412 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQL 412 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCC
Confidence 42 34688888888888887763 34578899999998 888887 5899999999999999886
Q ss_pred cceEEEEEeec
Q 023018 275 FQYTCVAYDLD 285 (288)
Q Consensus 275 ~~~~~~~~~~d 285 (288)
.....+.+++|
T Consensus 413 G~~P~~i~~~~ 423 (426)
T 3c75_H 413 GRGPQIITTHD 423 (426)
T ss_dssp SSSCCEEECCC
T ss_pred CCCCcEEEcCC
Confidence 23344555554
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=6.7e-12 Score=109.68 Aligned_cols=216 Identities=13% Similarity=0.039 Sum_probs=154.8
Q ss_pred CCeeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEcc--CCeeeEeeccccCcEEEEEEe----cCCCEEEEEe-C
Q 023018 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFS----MDGQLLASGG-L 127 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~-~ 127 (288)
+.+..+.. ...+..++|+| +++++++++.++.|.+||+. +.+.+..+.... ....++|+ |+|+++++++ .
T Consensus 188 ~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 188 EIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp CEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEE
T ss_pred eEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEcc
Confidence 44444443 23577999999 77888888999999999996 777777776433 45789999 6999888776 4
Q ss_pred CCeEEEEeCCCCceeEEeccC-----------CCCEEEEEEcCCCCE-EEEecCCCeEEEEECCcccEEEEee-ccCCCe
Q 023018 128 DGLVQIWDPSSGNLKCTLEGP-----------GGGVEWVSWHPRGHI-VLAGSEDSTVWMWNADRAAYLNMFS-GHGSSV 194 (288)
Q Consensus 128 dg~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i 194 (288)
++.|.++|..+.+.+..+... ...+..+..++++.. ++.....|.|.++|....+.+.... ......
T Consensus 265 ~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~ 344 (567)
T 1qks_A 265 PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFL 344 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSE
T ss_pred CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccc
Confidence 699999999999888776532 225788888887664 4455567999999987754322211 234567
Q ss_pred EEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeEEEcC-C-CccccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCC--
Q 023018 195 TCGDFTPDGKTICTGS-DDATLRVWNPKSGENIHVIRG-H-PYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITT-- 267 (288)
Q Consensus 195 ~~~~~~p~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iwd~~t-- 267 (288)
..+.|+|++++|+++. .++.|.++|+.+++....+.. . ..|...-..+ ++|++. +.+++. .++.|.+++..+
T Consensus 345 ~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 345 HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred cCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 8899999999987765 578999999999988777654 2 2233222222 578744 444543 468999999998
Q ss_pred -----CcEEEEe
Q 023018 268 -----GKVCCLN 274 (288)
Q Consensus 268 -----~~~~~~~ 274 (288)
.+.+.++
T Consensus 424 ~~~~~~kvv~~i 435 (567)
T 1qks_A 424 HPDNAWKILDSF 435 (567)
T ss_dssp CTTTBTSEEEEE
T ss_pred CccccCEEEEEE
Confidence 5677766
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=1.4e-11 Score=98.87 Aligned_cols=216 Identities=13% Similarity=0.097 Sum_probs=153.9
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeE-eeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc
Q 023018 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (288)
.....+.++++.+ ++.++++...++.|.+|+.. ++... .+......+.++++.+++.++++...++.|..||.. ++
T Consensus 17 ~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 3456789999999 67777777678999999987 54433 222334678899999999877776668899999987 55
Q ss_pred eeE-EeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEE-EeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 023018 141 LKC-TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN-MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVW 218 (288)
Q Consensus 141 ~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~ 218 (288)
... .+......+..+++.++++++++...++.|..|+.. ++... .+......+..+++.++++.+++...++.|..|
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 432 222234578999999999888887778899999987 55432 222234678999999999966666667899999
Q ss_pred eCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe-----cceEEEEEeec
Q 023018 219 NPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN-----FQYTCVAYDLD 285 (288)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~-----~~~~~~~~~~d 285 (288)
|. +++... +... .....+..+++++++.++++....+.|.+|+. +++..... ..+.+++++++
T Consensus 173 ~~-~g~~~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~ 240 (300)
T 2qc5_A 173 TN-TGKLEE-YPLP-TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKN 240 (300)
T ss_dssp CT-TCCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST
T ss_pred CC-CCcEEE-eeCC-CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCC
Confidence 98 555443 3221 13456889999999988777766788999998 66655442 23556666543
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.4e-12 Score=105.77 Aligned_cols=198 Identities=12% Similarity=0.172 Sum_probs=138.7
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEe-ecc----ccCcEEEEEEecCCCEEEEEeCC---------
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQG----HKDSVSSLAFSMDGQLLASGGLD--------- 128 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d--------- 128 (288)
+...+.+++++++++.++++.. .+.|.+|+.. ++.... ... ....+.++++.++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4467899999993266555544 3479999988 655433 221 12347899999999877776554
Q ss_pred ------CeEEEEeCCCCceeEEeccCCCCEEEEEEc----CCCCEEEEe-cCCCeEEEEECC-ccc-----EEEEeeccC
Q 023018 129 ------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWH----PRGHIVLAG-SEDSTVWMWNAD-RAA-----YLNMFSGHG 191 (288)
Q Consensus 129 ------g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~-----~~~~~~~~~ 191 (288)
+.|..|+.. ++..... .+......++|+ |+++.++++ ..++.|.+|++. +++ ....+..+.
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred cccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC
Confidence 577788765 5443332 233457889999 998755544 567999999976 333 222233333
Q ss_pred -CCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEE-EEeCCCcEEEEEcCC
Q 023018 192 -SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGSVHMVNITT 267 (288)
Q Consensus 192 -~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~t 267 (288)
..+..++++++|+++++...++.|.+||..+++....+.. +...+.+++++|+++.|+ +...++.|..|++..
T Consensus 225 ~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 225 EGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC---PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC---SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC---CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 5678899999998888877889999999987776666654 346789999999998554 445568999999875
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.61 E-value=3.2e-14 Score=117.86 Aligned_cols=149 Identities=13% Similarity=0.110 Sum_probs=118.5
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc-----------eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEE
Q 023018 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN-----------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 177 (288)
+++.+++++...++++|+.++ +.+|++...+ ...... ..+ |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999999999999875 6669864332 112233 445 999999 88999999 789999999
Q ss_pred CCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC
Q 023018 178 ADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD 257 (288)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 257 (288)
+++.........+..++..+.+.+. .+++++.||.|.+||+.++.... +...|++++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEEEcC
Confidence 9887666666677888888887764 38888999999999999877543 34579999999999 6788999
Q ss_pred CcEEEEEcCCCcE--EEEe
Q 023018 258 GSVHMVNITTGKV--CCLN 274 (288)
Q Consensus 258 g~i~iwd~~t~~~--~~~~ 274 (288)
|.+++|+..++++ .+.+
T Consensus 182 g~i~~~~~~~~~~~~k~~I 200 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEF 200 (388)
T ss_dssp SCEEEEEEETTEEEEEEEE
T ss_pred CcEEEEcCCCcccccccee
Confidence 9999999988775 4444
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=1.6e-11 Score=98.64 Aligned_cols=202 Identities=8% Similarity=0.038 Sum_probs=145.2
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeE-eeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCce
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (288)
+...+.++++.+ ++.++++...++.|..|+.. ++... .+......+.++++.+++.++++...++.|..++.. ++.
T Consensus 60 ~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 60 PDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 346789999998 66777776667889999987 54432 222234678999999999877777768899999987 554
Q ss_pred eEE-eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEE-eeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEe
Q 023018 142 KCT-LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDGKTICTGSDDATLRVWN 219 (288)
Q Consensus 142 ~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d 219 (288)
... +......+..+++.++++++++...++.|..|+. +++.... .......+..+++.+++..+++....+.|.+|+
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 422 3334557899999999997777777889999998 5554332 223345688999999988777666677899999
Q ss_pred CCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
. ++..... ... .....+.+++++++|.++++...++.|..|+. +++...
T Consensus 216 ~-~g~~~~~-~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 264 (300)
T 2qc5_A 216 T-TGEISEY-DIP-TPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQE 264 (300)
T ss_dssp T-TCCEEEE-ECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEE
T ss_pred C-CCcEEEE-ECC-CCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEE
Confidence 8 4544332 211 13456889999999987777666789999998 565443
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=9.2e-12 Score=103.56 Aligned_cols=202 Identities=13% Similarity=0.051 Sum_probs=133.7
Q ss_pred CCcEEEEEeC--CC---eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe----------CCCeEEEEeCCCCc
Q 023018 76 DATLVATGGG--DD---KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGN 140 (288)
Q Consensus 76 ~~~~l~~~~~--dg---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~ 140 (288)
++..+++... .. .|.+||..+++.+..+.....+ .++++|++++++++. .++.|.+||..+.+
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 4555555542 22 8899999999988888754444 899999999988875 36789999999988
Q ss_pred eeEEeccC-------CCCEEEEEEcCCCCEEEEecC--CCeEEEEECCcccEEEE-eeccCCCeEEEEEcCCC-CEEEEE
Q 023018 141 LKCTLEGP-------GGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDG-KTICTG 209 (288)
Q Consensus 141 ~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~p~~-~~l~~~ 209 (288)
.+..+... ......+.|+|+|++|+++.. ++.|.++| .+++.+.. +.... . +.+.|.+ +.+++.
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~---~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-C---YHIHPGAPSTFYLL 183 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-e---EEEEeCCCceEEEE
Confidence 87776543 123568999999999998874 57899999 99988777 54221 1 2223322 223333
Q ss_pred eCCCeEEEEeCCCCcee--------------------------------------------------EEEcCC-------
Q 023018 210 SDDATLRVWNPKSGENI--------------------------------------------------HVIRGH------- 232 (288)
Q Consensus 210 ~~dg~i~i~d~~~~~~~--------------------------------------------------~~~~~~------- 232 (288)
+.||.+.++|. +++.. ..+...
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~ 262 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKAD 262 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccc
Confidence 34444444444 33222 111000
Q ss_pred CccccCeEEEEEcCCCCEEEEEeC----------CCcEEEEEcCCCcEEEEe---cceEEEEEeec
Q 023018 233 PYHTEGLTCLTISADSTLALSGSK----------DGSVHMVNITTGKVCCLN---FQYTCVAYDLD 285 (288)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iwd~~t~~~~~~~---~~~~~~~~~~d 285 (288)
.........+.++|++..|+++.. .+.|.++|+.+++.+..+ ....+++|++|
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~D 328 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQD 328 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCC
Confidence 000122334678888888777643 357999999999998887 34778888876
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.56 E-value=6.1e-16 Score=128.78 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=110.9
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCC-EE-
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-VE- 153 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~- 153 (288)
.+..+++++.||.|+.||..+++.+..+.. ..+.+..+..++..+++++.||.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 345788899999999999999998888875 45555555667777888889999999999988876665432110 00
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC
Q 023018 154 WVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP 233 (288)
Q Consensus 154 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 233 (288)
+..+. .+..+++++.++.|+.||.++++.+..+..+. ...++|++..+++++.++.|+.||.++|+.+..+....
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 00111 34577888889999999999999887776543 23456788899999999999999999998766554211
Q ss_pred ccccCeEEEEEcCCC---CEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 234 YHTEGLTCLTISADS---TLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 234 ~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.....+.++. ..+++++.+|.|+.||..+|+.+...
T Consensus 161 -----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 161 -----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp -----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred -----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 1122233321 45677889999999999999988765
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=9.5e-12 Score=100.32 Aligned_cols=186 Identities=12% Similarity=0.044 Sum_probs=127.5
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc----ccCcEEEEEEecCCCEEEEEeC-----------
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG----HKDSVSSLAFSMDGQLLASGGL----------- 127 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~----------- 127 (288)
+...+.+++++| ++.++++ . ++.|.+|+..+++....... ....+++++++|+|+++++...
T Consensus 52 ~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 52 MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 346799999999 5665544 3 46799999988765433221 1234789999999996665432
Q ss_pred CCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEE-EecCCCeEEEEEC--CcccE-----EEEeeccCCCeEEEEE
Q 023018 128 DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVL-AGSEDSTVWMWNA--DRAAY-----LNMFSGHGSSVTCGDF 199 (288)
Q Consensus 128 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~--~~~~~-----~~~~~~~~~~i~~~~~ 199 (288)
.+.|..++.. ++... +.........++|+|+++.|+ +.+.++.|.+|++ .++.. ...+......+..+++
T Consensus 129 ~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~ 206 (297)
T 3g4e_A 129 QGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI 206 (297)
T ss_dssp CEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred CcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence 2344444432 33332 333334578999999998664 5566789999987 44432 2223333456789999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEc-CCCCEEEEEeC
Q 023018 200 TPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSK 256 (288)
Q Consensus 200 ~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 256 (288)
.++|++.++....+.|.+||..+++.+..+.. +...+++++|. |+++.|++.+.
T Consensus 207 d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~---p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 207 DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL---PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BTTSCEEEEEETTTEEEEECTTTCCEEEEEEC---SSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC---CCCCceEEEEeCCCCCEEEEEcC
Confidence 99998888777788999999998988888775 34678999998 88777665543
No 212
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.54 E-value=3.8e-13 Score=121.12 Aligned_cols=198 Identities=15% Similarity=0.058 Sum_probs=134.7
Q ss_pred EEEEEcCCCCcEEEEEeCCCe-------------EEEEEccCCe----eeEeeccccCcEEEEEEecCCCEEEEEeCCC-
Q 023018 68 YSVACSPTDATLVATGGGDDK-------------GFFWRINQGD----WASEIQGHKDSVSSLAFSMDGQLLASGGLDG- 129 (288)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~dg~-------------i~iw~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg- 129 (288)
..++|+| +++.|+.++.+.. |++|++.+++ .+.....+...+..+.|+|+|++|+.++.++
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 249 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW 249 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC
Confidence 6789999 6777777777665 9999998865 3333334556788999999999988877665
Q ss_pred ---eEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEec---CCCeEEEEECCcccE---EEEeecc-CCCeEEEEE
Q 023018 130 ---LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS---EDSTVWMWNADRAAY---LNMFSGH-GSSVTCGDF 199 (288)
Q Consensus 130 ---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~---~~~~~~~-~~~i~~~~~ 199 (288)
.|.+|+..+++.. .+..+...+....| +++.+++.+. .++.|.+||+.++.. ...+..+ ...+..++|
T Consensus 250 ~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~ 327 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI 327 (695)
T ss_dssp TEEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE
T ss_pred CceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE
Confidence 7778876655543 34444445666666 4555444443 257899999987652 2333222 446788888
Q ss_pred cCCCCEEEEEeCCCeEEEEeCC-CCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe----CCCcEEEEEcCCCcEE
Q 023018 200 TPDGKTICTGSDDATLRVWNPK-SGENIHVIRGHPYHTEGLTCLTISADSTLALSGS----KDGSVHMVNITTGKVC 271 (288)
Q Consensus 200 ~p~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~t~~~~ 271 (288)
+ ++.++++...++..++|.+. ++.....+..+ ....+..+.++|++..|+... ..+.|++||+.+++..
T Consensus 328 ~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 328 V-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLP--GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp E-TTEEEEEEEETTEEEEEEEETTCCEEEECCCS--SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred E-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 8 66778888889987777543 35555555432 245567788899887666332 3478999999998753
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=5.2e-12 Score=104.02 Aligned_cols=215 Identities=9% Similarity=0.030 Sum_probs=143.9
Q ss_pred CCEEEEEEcCCCCcEEEEEe--CCCeEEEEEccCCeeeEeec-------cccCcEEEEEEecCCCEEEEEeC-----CCe
Q 023018 65 DEVYSVACSPTDATLVATGG--GDDKGFFWRINQGDWASEIQ-------GHKDSVSSLAFSMDGQLLASGGL-----DGL 130 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~-----dg~ 130 (288)
.....++++| +++++++.. .++.++||.+.+++. ..+. .+-..+..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6789999999 677877753 234356666655543 2221 24467899999999876555433 578
Q ss_pred EEEEeCCCCceeEEeccC------CCCEEEEEEcCCCCE-EEEec---CCCeEEEEECCcccEEEEeecc----------
Q 023018 131 VQIWDPSSGNLKCTLEGP------GGGVEWVSWHPRGHI-VLAGS---EDSTVWMWNADRAAYLNMFSGH---------- 190 (288)
Q Consensus 131 i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~-l~~~~---~dg~i~i~d~~~~~~~~~~~~~---------- 190 (288)
|.+||+.+++.+..+..+ ...+..+++++++.. +++-. .++.|.+||+.+++..+.+..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877666432 235688999986444 45544 5789999999887765544321
Q ss_pred -------------------CCCeEEEEEcCCCCEEEEEeCCC-eEEEEeCC---CCc--------eeEEEcCCCccccCe
Q 023018 191 -------------------GSSVTCGDFTPDGKTICTGSDDA-TLRVWNPK---SGE--------NIHVIRGHPYHTEGL 239 (288)
Q Consensus 191 -------------------~~~i~~~~~~p~~~~l~~~~~dg-~i~i~d~~---~~~--------~~~~~~~~~~~~~~v 239 (288)
...+..|+|+|+++.|+++...+ .|..++.. .+. .+..+. +....
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g----~~g~p 250 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS----EKPIC 250 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE----ECCSC
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc----cCCCC
Confidence 12368899999999998887766 55555431 111 011111 22345
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe-----cceEEEEEeec
Q 023018 240 TCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN-----FQYTCVAYDLD 285 (288)
Q Consensus 240 ~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~-----~~~~~~~~~~d 285 (288)
..++++++|.++++...++.|.+||..+|+..... ....+++|+++
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC
Confidence 67899999999999888999999998667654332 23567777654
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.52 E-value=2.2e-12 Score=106.47 Aligned_cols=199 Identities=10% Similarity=-0.038 Sum_probs=142.6
Q ss_pred EEEEEeCCC----eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe----------CCCeEEEEeCCCCceeEE
Q 023018 79 LVATGGGDD----KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCT 144 (288)
Q Consensus 79 ~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~ 144 (288)
.+++...++ +|.++|..+++.+.++.....+ .+.++|++++++++. .++.|.+||+.+++.+..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 444444444 8889999999999998865566 699999999888876 368999999999999988
Q ss_pred eccC-------CCCEEEEEEcCCCCEEEEecC--CCeEEE--EECCcccEEE---------------------------E
Q 023018 145 LEGP-------GGGVEWVSWHPRGHIVLAGSE--DSTVWM--WNADRAAYLN---------------------------M 186 (288)
Q Consensus 145 ~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~---------------------------~ 186 (288)
+..+ ......++++|+|++++++.. ...+.+ +|+.+-..+. .
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEE
Confidence 8643 123567999999999888864 356777 7774300000 0
Q ss_pred e--------------------------------------------eccCC-----------------------CeEEEEE
Q 023018 187 F--------------------------------------------SGHGS-----------------------SVTCGDF 199 (288)
Q Consensus 187 ~--------------------------------------------~~~~~-----------------------~i~~~~~ 199 (288)
+ ..... ....+.+
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred CccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 0 00000 0011678
Q ss_pred cCCCCEEEEEeC---------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCC-EEEEEe-CCCcEEEEEcCCC
Q 023018 200 TPDGKTICTGSD---------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS-KDGSVHMVNITTG 268 (288)
Q Consensus 200 ~p~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iwd~~t~ 268 (288)
+|++++++++.. ++.+.++|+.+++.+..+.. ......+.|+|+|+ ++++.. .++.|.++|+.++
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 999998887643 23566999999988887763 33588999999997 556666 5899999999999
Q ss_pred cEEEEe---cceEEEEEe
Q 023018 269 KVCCLN---FQYTCVAYD 283 (288)
Q Consensus 269 ~~~~~~---~~~~~~~~~ 283 (288)
+.+..+ ....++++.
T Consensus 348 kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 348 QDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp EEEEECCCCSCCCEEECC
T ss_pred cEEEEEECCCCCCEEEee
Confidence 999988 344555543
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=5.9e-12 Score=103.98 Aligned_cols=210 Identities=11% Similarity=0.053 Sum_probs=145.1
Q ss_pred EEEEEEcCCCCcEEEEEeC--CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC-CceeE
Q 023018 67 VYSVACSPTDATLVATGGG--DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKC 143 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~ 143 (288)
-..++|+| ++++++++.. ++.|.++|+.+++.+.++... + . ...+....+.+++.+.||.+.+.++.+ ++...
T Consensus 139 P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 139 PWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp GGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred CceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 34589999 6666666543 689999999999999888632 2 1 233433455777888899999999876 55432
Q ss_pred EeccC----CCCEE-EEEEc-CCCCEEEEecCCCeEEEEECCccc--EEEEeec----------cCCCeEEEEEcCCCCE
Q 023018 144 TLEGP----GGGVE-WVSWH-PRGHIVLAGSEDSTVWMWNADRAA--YLNMFSG----------HGSSVTCGDFTPDGKT 205 (288)
Q Consensus 144 ~~~~~----~~~i~-~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~----------~~~~i~~~~~~p~~~~ 205 (288)
..... ..++. ...|. ++|++++ .+.+|.|++.|+.+.. .+..+.. .......++++|++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ 293 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR 293 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE
T ss_pred eecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe
Confidence 21111 12222 23554 5665555 5557999999997653 3333320 1123335777999999
Q ss_pred EEEEeC----------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCC-EEEEE-eCCCcEEEEEcCCCcEEEE
Q 023018 206 ICTGSD----------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSG-SKDGSVHMVNITTGKVCCL 273 (288)
Q Consensus 206 l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~~dg~i~iwd~~t~~~~~~ 273 (288)
+++... .+.|.++|+.+++.+..+.. ...+.+|.++++++ +|++. ..++.|.++|..+++.++.
T Consensus 294 lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v----g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 294 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC----CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 888653 25799999999999998873 45688999999986 66665 4589999999999999998
Q ss_pred e---cceEEEEEeec
Q 023018 274 N---FQYTCVAYDLD 285 (288)
Q Consensus 274 ~---~~~~~~~~~~d 285 (288)
+ .....+.+++|
T Consensus 370 i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 370 VNQLGHGPQVITTAD 384 (386)
T ss_dssp ECCCCSSCCEEEECC
T ss_pred ecCCCCCceeEECCc
Confidence 8 45667888877
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.51 E-value=2.6e-12 Score=115.56 Aligned_cols=201 Identities=9% Similarity=0.035 Sum_probs=132.7
Q ss_pred cCCCCEEEEEEcCCCCcEEE-EEeC----CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCC-------
Q 023018 62 GHSDEVYSVACSPTDATLVA-TGGG----DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG------- 129 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~-~~~~----dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------- 129 (288)
+|...+..++|+| ++++|| +.+. ...|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 3556789999999 565555 3332 3579999999988654321 11113567899 999998887764
Q ss_pred ------eEEEEeCCCCce--eEEecc---CCCCEEEEEEcCCCCEEEEecC----CCeEEEEECCccc-EEEEeeccCCC
Q 023018 130 ------LVQIWDPSSGNL--KCTLEG---PGGGVEWVSWHPRGHIVLAGSE----DSTVWMWNADRAA-YLNMFSGHGSS 193 (288)
Q Consensus 130 ------~i~i~d~~~~~~--~~~~~~---~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~-~~~~~~~~~~~ 193 (288)
.|++|++.++.. ...+.. +......+.|+|+|++|+.... ...|+++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 399999987653 233332 3345788999999998765432 3589999997763 34455555555
Q ss_pred eEEEEEcCCCCEEEEEe-CC---CeEEEEeCCCCce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeC-CC--cEEEEE
Q 023018 194 VTCGDFTPDGKTICTGS-DD---ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSK-DG--SVHMVN 264 (288)
Q Consensus 194 i~~~~~~p~~~~l~~~~-~d---g~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd 264 (288)
.... |++++..|+..+ .+ +.|..+|+.++.. ...+.. +...+. .|+++++.|+.... +| .|++|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP---ERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC---CCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec---CCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 5554 667666665544 33 5799999987654 334443 333343 88888887776654 43 789999
Q ss_pred cCCCcEE
Q 023018 265 ITTGKVC 271 (288)
Q Consensus 265 ~~t~~~~ 271 (288)
+.++...
T Consensus 357 ~~g~~~~ 363 (693)
T 3iuj_A 357 YEGKRVR 363 (693)
T ss_dssp TTSCEEE
T ss_pred CCCCeeE
Confidence 8865443
No 217
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.50 E-value=4e-10 Score=89.27 Aligned_cols=215 Identities=11% Similarity=0.014 Sum_probs=142.7
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCceeE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~ 143 (288)
..+.+++|++.++.++++-...+.|..+++........+.........+++++++..|+.+ ...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 4578999999666777777778899999987655433333222466899999976655554 456899999987543333
Q ss_pred EeccCCCCEEEEEEcCCCCEEEEecC---CCeEEEEECCcccEEEEee-ccCCCeEEEEEcCCCCEEEEEe-CCCeEEEE
Q 023018 144 TLEGPGGGVEWVSWHPRGHIVLAGSE---DSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTPDGKTICTGS-DDATLRVW 218 (288)
Q Consensus 144 ~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~ 218 (288)
...........++++|++..|+.+.. .+.|..+++.... ...+. ..-.....++++|++..|+.+. ..+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 33333356889999996555554443 4688888875432 22222 2234678999999887776655 46789999
Q ss_pred eCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec-----ceEEEEEeec
Q 023018 219 NPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNF-----QYTCVAYDLD 285 (288)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~-----~~~~~~~~~d 285 (288)
|+........+.. ......++.. .+.++++....+.|.++|..+++.+..+. ...++++.|+
T Consensus 195 ~~~g~~~~~~~~~----~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 195 NPAQPGRRKVLEG----LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp ETTEEEEEEEEEC----CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred ecCCCceEEEecC----CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 9875443333332 2234566654 34444454456899999999999988872 3567887776
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=3.4e-11 Score=101.45 Aligned_cols=192 Identities=11% Similarity=0.104 Sum_probs=132.1
Q ss_pred EEEcCCCCcEEEEEeCCC--eEEEEEccCCeeeEee----ccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeE
Q 023018 70 VACSPTDATLVATGGGDD--KGFFWRINQGDWASEI----QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (288)
++|+| ++..|+++..++ .|.+|+...+.....+ ......+.+++++|++..|+++..++.|+.|+..++....
T Consensus 176 ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 176 PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE
T ss_pred eeEec-CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE
Confidence 88888 556666666655 7888888765443333 2134566889999955556667778999999998775433
Q ss_pred E----eccCCCCE--EEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEeeccC---------------CCeEEEEEcC
Q 023018 144 T----LEGPGGGV--EWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHG---------------SSVTCGDFTP 201 (288)
Q Consensus 144 ~----~~~~~~~i--~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~i~~~~~~p 201 (288)
. ..+....- ..++|+|+ +.++++-..++.|+.|+.... +..+.++. .....++++|
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 2 22222212 38999994 666666677899999987543 22332221 3478999999
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCCceeEEEcCCC------------ccccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 023018 202 DGKTICTGS-DDATLRVWNPKSGENIHVIRGHP------------YHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (288)
Q Consensus 202 ~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 265 (288)
+|+++++-. .++.|+.|++.++.. ..+.+.. ........+++++++.++++-..+++|+.+++
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999777766 788999999877764 3333320 01245889999999888888888888988875
No 219
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=3.1e-12 Score=116.02 Aligned_cols=197 Identities=11% Similarity=0.017 Sum_probs=130.7
Q ss_pred EEEEEcCCCCcEEEEEeCCC--------------eEEEEEccCCee--eEeec--cccCcEEEEEEecCCCEEEEEeCCC
Q 023018 68 YSVACSPTDATLVATGGGDD--------------KGFFWRINQGDW--ASEIQ--GHKDSVSSLAFSMDGQLLASGGLDG 129 (288)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~dg--------------~i~iw~~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg 129 (288)
..++|+| + +.|+.++.++ .|++|++.++.. ...+. .+...+..+.|+|+|++|+..+.++
T Consensus 212 ~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 212 SGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred ccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 5788999 5 6666665544 388999877652 22232 2334588999999999888777543
Q ss_pred -----eEEEEeCCCC--ceeEEeccCCCCEEEEEEcCCCCEEEEecC----CCeEEEEECCcc--cEEEEeeccCCCeEE
Q 023018 130 -----LVQIWDPSSG--NLKCTLEGPGGGVEWVSWHPRGHIVLAGSE----DSTVWMWNADRA--AYLNMFSGHGSSVTC 196 (288)
Q Consensus 130 -----~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~~i~~ 196 (288)
.|++||+.++ +....+..+........ +|+++.|+..+. ++.|.+|++.++ .....+..+...+..
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 8999999877 41344444444455543 478888877765 356999999874 333334444455667
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC-CCceeEEEcCCCccccCeEEEEEcCCCCEEEE-Ee---CCCcEEEEEcCCCcE
Q 023018 197 GDFTPDGKTICTGSDDATLRVWNPK-SGENIHVIRGHPYHTEGLTCLTISADSTLALS-GS---KDGSVHMVNITTGKV 270 (288)
Q Consensus 197 ~~~~p~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~---~dg~i~iwd~~t~~~ 270 (288)
+.|+ .+.++++...++..+||.+. ++.....+... ....+..+.++|++..|+. .+ ..+.|++||+.+++.
T Consensus 369 ~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 369 VGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP--GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCS--SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7777 55667788888876666443 35555555431 2456788999998875553 22 347899999998874
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=1.8e-10 Score=94.11 Aligned_cols=183 Identities=12% Similarity=0.056 Sum_probs=124.0
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc----ccCcEEEEEEecCCCEEEEEeC------CCeEEE
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG----HKDSVSSLAFSMDGQLLASGGL------DGLVQI 133 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~------dg~i~i 133 (288)
...+.+++|.| ++.++++. . ..|.+|+..+++....... ....+.+++++|+|+++++... .+.|..
T Consensus 89 ~~~v~~i~~~~-dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 89 PFMGSALAKIS-DSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SSCEEEEEEEE-TTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCcceEEEEeC-CCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 45799999999 66666554 4 4599999887765433221 1235789999999986665432 245666
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEe-cCCCeEEEEECC--cc-c-----EEEEeeccCCCeEEEEEcCCCC
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNAD--RA-A-----YLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~-----~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
++ +++... +.........++|+|+++.++.+ +.++.|.+|++. ++ . ....+......+..+++.++|.
T Consensus 166 ~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 166 VA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp EE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred Ee--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 66 454332 32233457889999999866554 557899999985 55 2 1222222345678899999998
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEc-CCCCEEEEEeC
Q 023018 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSK 256 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 256 (288)
+.++...++.|.+||. +++.+..+.. ....+.+++|+ |++..|++++.
T Consensus 243 lwva~~~~~~v~~~d~-~g~~~~~i~~---~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDT-DGNHIARYEV---PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEETTTEEEEECT-TCCEEEEEEC---SCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEEeCCCEEEEECC-CCCEEEEEEC---CCCCcEEEEEecCCCCEEEEEec
Confidence 7777767789999998 5776666654 34568999998 88776655443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=4.2e-11 Score=96.89 Aligned_cols=196 Identities=12% Similarity=0.043 Sum_probs=131.6
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccc----cCcEEEEEEecCCCEEEE----EeC-
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGH----KDSVSSLAFSMDGQLLAS----GGL- 127 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~~- 127 (288)
...+..+...+..+++.+ +++++++...++.|.+|+.. ++........ ...+.++++.++|+++++ |..
T Consensus 78 ~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 78 VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 345556677899999999 67777666666789999976 4432222111 134578999999997776 331
Q ss_pred ------------CCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCC------CeEEEEECCcccEE--EEe
Q 023018 128 ------------DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED------STVWMWNADRAAYL--NMF 187 (288)
Q Consensus 128 ------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~ 187 (288)
.+.|..|+..+++..... .......++|+|+++.|+++... +.|++|++..+... ..+
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE
Confidence 256888887777654443 33457889999999977777654 78999998654311 111
Q ss_pred -eccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 188 -SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 188 -~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
......+..+++.++|++ .+++.+ .|.+|+. .++.+..+... ..+.+++|+|+++.|+.++.++ ++.++
T Consensus 234 ~~~~~~~pdgi~~d~~G~l-wv~~~~-gv~~~~~-~g~~~~~~~~~----~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 234 ASVPDGLPDGFCVDRGGWL-WSSSGT-GVCVFDS-DGQLLGHIPTP----GTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp ECCSSSCCCSEEECTTSCE-EECCSS-EEEEECT-TSCEEEEEECS----SCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EECCCCCCCeEEECCCCCE-EEecCC-cEEEECC-CCCEEEEEECC----CceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 112334567889999984 444444 5999998 56777777642 2588899999988888877653 44444
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.43 E-value=9e-11 Score=97.82 Aligned_cols=200 Identities=13% Similarity=0.086 Sum_probs=138.4
Q ss_pred CCCCcEEEEEeCCCeEEEEEccCC----eeeEeec------cc-cCcEEEEEEecCCCEEEEEeCC------CeEEEEeC
Q 023018 74 PTDATLVATGGGDDKGFFWRINQG----DWASEIQ------GH-KDSVSSLAFSMDGQLLASGGLD------GLVQIWDP 136 (288)
Q Consensus 74 ~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~------~~-~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~ 136 (288)
+....+++++..+++|+++|+.+. +.+.++. .. ...-..+...|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 645667777888999999999755 5566662 11 1133567788999 66666554 78999999
Q ss_pred CCCceeEEeccCCC---CEEEEEEcCCCCEEEEec-------------------CCCeEEEEECCcccEEEEeecc--CC
Q 023018 137 SSGNLKCTLEGPGG---GVEWVSWHPRGHIVLAGS-------------------EDSTVWMWNADRAAYLNMFSGH--GS 192 (288)
Q Consensus 137 ~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~--~~ 192 (288)
.+++.+.++..... .-..+.|+|+++.+++.. ...+|.+||+.+++.+.++... ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999988874322 234588899999888885 3689999999998888887753 13
Q ss_pred CeEEEEE--cCCCCEEEEEe------CCCeEEEEeCCCCce--eEEE--cCCCc-------------cccCeEEEEEcCC
Q 023018 193 SVTCGDF--TPDGKTICTGS------DDATLRVWNPKSGEN--IHVI--RGHPY-------------HTEGLTCLTISAD 247 (288)
Q Consensus 193 ~i~~~~~--~p~~~~l~~~~------~dg~i~i~d~~~~~~--~~~~--~~~~~-------------~~~~v~~~~~~~~ 247 (288)
....+.| +|+++++++++ .+++|.+|....+.. ...+ ..... .......+.++||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4455656 99999988777 466887766544321 1111 11000 0234678999999
Q ss_pred CCEEEEEeC-CCcEEEEEcCC---CcEEEEe
Q 023018 248 STLALSGSK-DGSVHMVNITT---GKVCCLN 274 (288)
Q Consensus 248 ~~~l~~~~~-dg~i~iwd~~t---~~~~~~~ 274 (288)
|++|+++.. .+.|.+||+.. .+++..+
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 999988765 68999999862 3455444
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=7e-11 Score=97.25 Aligned_cols=197 Identities=11% Similarity=0.035 Sum_probs=134.5
Q ss_pred cCCCCEEEEEEcCCCCcEEEEEeC-----CCeEEEEEccCCeeeEeeccc------cCcEEEEEEecCCCEE-EEEe---
Q 023018 62 GHSDEVYSVACSPTDATLVATGGG-----DDKGFFWRINQGDWASEIQGH------KDSVSSLAFSMDGQLL-ASGG--- 126 (288)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l-~~~~--- 126 (288)
+|-..+.++++.+ +++++++-.. ++.|.+||+.+++.+..+... ...+..+++++++..+ ++-.
T Consensus 64 ~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 4567899999999 5666665433 578999999998877665422 2346889999865554 4444
Q ss_pred CCCeEEEEeCCCCceeEEeccC-----------------------------CCCEEEEEEcCCCCEEEEecCCC-eEEEE
Q 023018 127 LDGLVQIWDPSSGNLKCTLEGP-----------------------------GGGVEWVSWHPRGHIVLAGSEDS-TVWMW 176 (288)
Q Consensus 127 ~dg~i~i~d~~~~~~~~~~~~~-----------------------------~~~i~~~~~~~~~~~l~~~~~dg-~i~i~ 176 (288)
.++.|.+||+.+++....+..| ...+..++|+|+++.|+++...+ .++.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 5789999999888766554321 12368899999999888877655 56665
Q ss_pred ECCc---cc-----EEE--EeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC
Q 023018 177 NADR---AA-----YLN--MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (288)
Q Consensus 177 d~~~---~~-----~~~--~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (288)
+... +. ... ...++......++++++|.++++...++.|.+||..+++....... + ....+.++++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~-~~~~p~~va~~~ 300 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-E-KLSWTDSFNFGS 300 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-G-GGSCEEEEEECT
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-C-ceecCCeeEECC
Confidence 5321 10 000 1112334566789999999888888899999999856654333322 1 345688999999
Q ss_pred CCCEEEEEeCCCcEE
Q 023018 247 DSTLALSGSKDGSVH 261 (288)
Q Consensus 247 ~~~~l~~~~~dg~i~ 261 (288)
++.++++.+..+.+.
T Consensus 301 ~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 301 DGYLYFDCNQLHHSA 315 (343)
T ss_dssp TSCEEEEECCGGGSG
T ss_pred CCcEEEEeCcccccc
Confidence 998888877555443
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.42 E-value=9.6e-11 Score=91.84 Aligned_cols=197 Identities=9% Similarity=0.023 Sum_probs=137.8
Q ss_pred EEEEEEcCCCCcEEEEEeC--CCeEEEEEccCCeeeEeeccccC-cEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCcee
Q 023018 67 VYSVACSPTDATLVATGGG--DDKGFFWRINQGDWASEIQGHKD-SVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLK 142 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~ 142 (288)
...++|+| ++.++++.+. ++.|.++|+.+++.+..+.-... -...+++. ++.|+.+ -.++.+.++|..+.+.+
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 68999998 4555555443 57999999999998888652221 12244554 4455444 46899999999999998
Q ss_pred EEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-----CCeEEEEEcCCCCEEEEEeCCCeEEE
Q 023018 143 CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTICTGSDDATLRV 217 (288)
Q Consensus 143 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~~~~dg~i~i 217 (288)
..+......-. .++++++.++++..++.|.++|..+.+.+..+.... ..+..+.|. ++...+....++.|.+
T Consensus 100 ~~i~~g~~~g~--glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 100 KNFTHQMKDGW--GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEEECCSSSCC--EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECCCCCeE--EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 88864311122 344567777777778999999999988887776322 136678888 6644444446789999
Q ss_pred EeCCCCceeEEEcCCCc----------cccCeEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCc
Q 023018 218 WNPKSGENIHVIRGHPY----------HTEGLTCLTISADSTL-ALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 218 ~d~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~t~~ 269 (288)
.|+.+++.+..+..... .......++|+|+++. ++++...+.|++.++....
T Consensus 177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 99999999888864210 1135689999998765 4556677899999887643
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=1e-10 Score=96.59 Aligned_cols=191 Identities=18% Similarity=0.159 Sum_probs=134.8
Q ss_pred EcCCCCcEEEEEeC-----CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe----------CCCeEEEEeC
Q 023018 72 CSPTDATLVATGGG-----DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDP 136 (288)
Q Consensus 72 ~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~ 136 (288)
..| ++..+++... ++.|.+.|..+++.+..+..-..+ . ++++|++++++++. .++.|.+||.
T Consensus 40 ~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 356 4445555443 679999999999999988755555 4 99999999887765 3678999999
Q ss_pred CCCceeEEeccCC-------CCEEEEEEcCCCCEEEEecC--CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEE
Q 023018 137 SSGNLKCTLEGPG-------GGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC 207 (288)
Q Consensus 137 ~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~ 207 (288)
.+++.+..+.... .....+.++|+|++++++.. ++.|.++|+.+++.+.++..... ...+....+.++
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCceeE
Confidence 9999888875432 24667999999999888864 68999999999999988864321 222333456777
Q ss_pred EEeCCCeEEEEeCCC-CceeEEEcCC-CccccCeE-EEEEc-CCCCEEEEEeCCCcEEEEEcCCCc
Q 023018 208 TGSDDATLRVWNPKS-GENIHVIRGH-PYHTEGLT-CLTIS-ADSTLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~-~~~~~~~~~~-~~~~~~v~-~~~~~-~~~~~l~~~~~dg~i~iwd~~t~~ 269 (288)
+.+.||.+.+.++.+ ++........ .....++. ...|. ++|++++ .+.+|.|++.|+.++.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 888899999999876 5543222111 00112221 23554 6776655 5568999999997764
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.39 E-value=8.1e-11 Score=105.33 Aligned_cols=185 Identities=12% Similarity=0.192 Sum_probs=136.6
Q ss_pred CCeEEEEEccCCeeeEeeccccC--------------------------------cEEEEEEecCCCEEEEEeCCC----
Q 023018 86 DDKGFFWRINQGDWASEIQGHKD--------------------------------SVSSLAFSMDGQLLASGGLDG---- 129 (288)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~--------------------------------~i~~~~~~~~~~~l~~~~~dg---- 129 (288)
+|.|+.+|..+++.+..+..... ....++++|++..+++++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 68999999999998876643211 112567888888888887664
Q ss_pred ---------------eEEEEeCCCCceeEEeccCC---------CCEEEEEEcCCC---CEEEEecCCCeEEEEECCccc
Q 023018 130 ---------------LVQIWDPSSGNLKCTLEGPG---------GGVEWVSWHPRG---HIVLAGSEDSTVWMWNADRAA 182 (288)
Q Consensus 130 ---------------~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~ 182 (288)
.|..+|..+++.+..++... .....+....+| ..+++++.+|.++++|.++++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 59999999999888776421 122223333466 689999999999999999999
Q ss_pred EEEEeeccC-----------CCe------------------------EEEEEcCCCCEEEEEeCC---------------
Q 023018 183 YLNMFSGHG-----------SSV------------------------TCGDFTPDGKTICTGSDD--------------- 212 (288)
Q Consensus 183 ~~~~~~~~~-----------~~i------------------------~~~~~~p~~~~l~~~~~d--------------- 212 (288)
.+..+.... .++ ..++++|+..++++...+
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 887664221 111 146889988888876432
Q ss_pred ----------------------------CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023018 213 ----------------------------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (288)
Q Consensus 213 ----------------------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 264 (288)
|.|..||+.+++.+..+.. ..++....+...+.++++++.+|.+++||
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH----VSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC----CCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 7899999999998887763 33344455666778888899999999999
Q ss_pred cCCCcEEEEe
Q 023018 265 ITTGKVCCLN 274 (288)
Q Consensus 265 ~~t~~~~~~~ 274 (288)
+.||+++..+
T Consensus 505 ~~tG~~lw~~ 514 (677)
T 1kb0_A 505 AATGEKLWEA 514 (677)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCceeeee
Confidence 9999999877
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.37 E-value=1.5e-10 Score=103.81 Aligned_cols=185 Identities=14% Similarity=0.144 Sum_probs=132.7
Q ss_pred CCeEEEEEccCCeeeEeeccc-------------------------------cCcEEEEEEecCCCEEEEEeCCCe----
Q 023018 86 DDKGFFWRINQGDWASEIQGH-------------------------------KDSVSSLAFSMDGQLLASGGLDGL---- 130 (288)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~-------------------------------~~~i~~~~~~~~~~~l~~~~~dg~---- 130 (288)
+|.|+.||..+++.+..+... ......++++|+..++++++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999987766421 001125788888888998887764
Q ss_pred ---------------EEEEeCCCCceeEEeccC--C-------CCEEEEEEcCCCC---EEEEecCCCeEEEEECCcccE
Q 023018 131 ---------------VQIWDPSSGNLKCTLEGP--G-------GGVEWVSWHPRGH---IVLAGSEDSTVWMWNADRAAY 183 (288)
Q Consensus 131 ---------------i~i~d~~~~~~~~~~~~~--~-------~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 183 (288)
|..+|..+++.+..++.. . .++.......+|+ .++.++.+|.++++|.+++++
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999999999998877642 1 1222222223554 788999999999999999988
Q ss_pred EEEeeccCC---------------------------------------CeEEEEEcCCCCEEEEEeC-------------
Q 023018 184 LNMFSGHGS---------------------------------------SVTCGDFTPDGKTICTGSD------------- 211 (288)
Q Consensus 184 ~~~~~~~~~---------------------------------------~i~~~~~~p~~~~l~~~~~------------- 211 (288)
+........ .-..++++|+..++++...
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 744321100 0112678888888877532
Q ss_pred --------------------------------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCc
Q 023018 212 --------------------------------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (288)
Q Consensus 212 --------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 259 (288)
+|.|+.||+.+++.+..+... .++....+...+.++++++.||.
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~gt~dg~ 497 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV----TIFNGGTLSTAGNLVFEGSADGR 497 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC----CCccCccceECCCEEEEECCCCc
Confidence 377999999999988877642 22333355667789999999999
Q ss_pred EEEEEcCCCcEEEEe
Q 023018 260 VHMVNITTGKVCCLN 274 (288)
Q Consensus 260 i~iwd~~t~~~~~~~ 274 (288)
|+.||.+||+++..+
T Consensus 498 l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 498 VIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCccceee
Confidence 999999999999876
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.34 E-value=1.2e-09 Score=84.67 Aligned_cols=188 Identities=10% Similarity=0.062 Sum_probs=131.0
Q ss_pred cCCCC--EEEEEEcCCCCcEEEEEeCCC--eEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeC
Q 023018 62 GHSDE--VYSVACSPTDATLVATGGGDD--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDP 136 (288)
Q Consensus 62 ~h~~~--v~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~ 136 (288)
.|... ...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ........+.++.|... -.++.+.+||.
T Consensus 38 phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 38 PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 45443 4788888 346666666666 89999999999888876433 33332233345555544 46899999999
Q ss_pred CCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-----CCeEEEEEcCCCCEEEEEeC
Q 023018 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 137 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~~~~ 211 (288)
.+.+.+.++..... -..++ +++..|+.+..++.|.++|..+.+.+..+.... ..++.+.|. +|...+....
T Consensus 115 ~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 115 RNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp TTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred ccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 99999998875432 23444 467777777767899999999998888776421 234557776 6655555556
Q ss_pred CCeEEEEeCCCCceeEEEcCCCc---------cccCeEEEEEcCCCCEEEEEeC
Q 023018 212 DATLRVWNPKSGENIHVIRGHPY---------HTEGLTCLTISADSTLALSGSK 256 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~ 256 (288)
+..|.+.|.++++.+..+..... .....+.++|+|+++.|++.+.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 88999999999999888765311 1235689999998777766654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.33 E-value=1.5e-09 Score=90.46 Aligned_cols=187 Identities=14% Similarity=0.124 Sum_probs=129.0
Q ss_pred EEEEEEcCCCCcEEEEEeCC------CeEEEEEccCCeeeEeeccccC---cEEEEEEecCCCEEEEEe-----------
Q 023018 67 VYSVACSPTDATLVATGGGD------DKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGG----------- 126 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~----------- 126 (288)
-..+.+.| ++ +++++..+ |.|.++|..+.+.+.++..... --..+.|+|+++.+++..
T Consensus 140 Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 140 LHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred ccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 45567788 55 65565554 7899999999999888863222 234688899999888874
Q ss_pred --------CCCeEEEEeCCCCceeEEeccC--CCCEEEEEE--cCCCCEEEEec------CCCeEEEEECCccc--EEEE
Q 023018 127 --------LDGLVQIWDPSSGNLKCTLEGP--GGGVEWVSW--HPRGHIVLAGS------EDSTVWMWNADRAA--YLNM 186 (288)
Q Consensus 127 --------~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~--~~~~~~l~~~~------~dg~i~i~d~~~~~--~~~~ 186 (288)
...+|.+||+.+++.+.++... ......+.| +|+++++++++ .+++|.+|....+. ..+.
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE
T ss_pred chhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE
Confidence 3689999999998888877753 134556666 99999887776 46688776654332 1111
Q ss_pred e--ec----------------cCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeCCCC---ceeEEEcCCC-----------
Q 023018 187 F--SG----------------HGSSVTCGDFTPDGKTICTGSD-DATLRVWNPKSG---ENIHVIRGHP----------- 233 (288)
Q Consensus 187 ~--~~----------------~~~~i~~~~~~p~~~~l~~~~~-dg~i~i~d~~~~---~~~~~~~~~~----------- 233 (288)
+ .. ....+..|.++|+|++|+++.. .+.|.+||+... +.+..+....
T Consensus 298 Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~ 377 (462)
T 2ece_A 298 IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGH 377 (462)
T ss_dssp EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSC
T ss_pred EeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccc
Confidence 1 10 0245688999999999988775 679999998532 3444443210
Q ss_pred ccccCeEEEEEcCCCCEEEEEe
Q 023018 234 YHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 234 ~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
........+.++|+|++|+++.
T Consensus 378 ~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 378 KLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCSCCCCEEECTTSSEEEEEC
T ss_pred cCCCCCCEEEEcCCCCEEEEEc
Confidence 0011357899999999999887
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=1.9e-09 Score=84.52 Aligned_cols=183 Identities=12% Similarity=0.107 Sum_probs=128.4
Q ss_pred eeeEeeccccC--cEEEEEEecCCCEEEEEeC--CCeEEEEeCCCCceeEEeccCCC-CEEEEEEcCCCCEEEEecCCCe
Q 023018 98 DWASEIQGHKD--SVSSLAFSMDGQLLASGGL--DGLVQIWDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGSEDST 172 (288)
Q Consensus 98 ~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~ 172 (288)
+.+.++. |.. -...+.|++++.++++.+. ++.|+++|+.+++.+..+..... ....+++.. ++.+++.-.++.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence 3455554 443 3578999998654444443 57999999999999888764332 233556652 344455556799
Q ss_pred EEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCc--cccCeEEEEEcCCCCE
Q 023018 173 VWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY--HTEGLTCLTISADSTL 250 (288)
Q Consensus 173 i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~ 250 (288)
+.++|..+.+.+.++...... ...++++++.|+++..++.|.++|..+.+.+..+..... ....++.+.|. ++.+
T Consensus 88 v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 999999999988888643111 233566888888888889999999999888887764211 11246778888 6755
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEec-----------------ceEEEEEeec
Q 023018 251 ALSGSKDGSVHMVNITTGKVCCLNF-----------------QYTCVAYDLD 285 (288)
Q Consensus 251 l~~~~~dg~i~iwd~~t~~~~~~~~-----------------~~~~~~~~~d 285 (288)
.+....++.|.+.|..+++++..+. ...+++|+++
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 5555567899999999999999872 2368888875
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.28 E-value=2.7e-09 Score=82.73 Aligned_cols=181 Identities=10% Similarity=0.065 Sum_probs=127.7
Q ss_pred EEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCC-EEEEEeCCCeEEEEeCCCCceeEEe
Q 023018 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGNLKCTL 145 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (288)
...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ - .......-..+.++ ..++.-.++.+.+||..+.+.+.++
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 4788887 4677778888899999999999988777 2 23333322233444 4444557899999999999999988
Q ss_pred ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-----CCeEEEEEcCCCCEEEEEeCCCeEEEEeC
Q 023018 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTICTGSDDATLRVWNP 220 (288)
Q Consensus 146 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~~~~dg~i~i~d~ 220 (288)
..... -..+++ +++.|+.+..++.|.++|..+.+.+..+.... ..++.+.|. +|...+....+..|.+.|.
T Consensus 133 ~~~~e-GwGLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 133 RYSGE-GWGLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp ECSSC-CCCEEE--ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred eCCCc-eeEEec--CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 75432 244554 57777777778999999999998888776422 244667777 6654444446889999999
Q ss_pred CCCceeEEEcCCC----------ccccCeEEEEEcCCCCEEEEEe
Q 023018 221 KSGENIHVIRGHP----------YHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 221 ~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
++++.+..+.... ....-.+.|+|+|+++.|++.+
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999888776421 1123578999999765555443
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.27 E-value=9.3e-09 Score=79.09 Aligned_cols=187 Identities=9% Similarity=0.018 Sum_probs=128.8
Q ss_pred cCCC--CEEEEEEcCCCCcEEEEEeCC--CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEEEEeC
Q 023018 62 GHSD--EVYSVACSPTDATLVATGGGD--DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDP 136 (288)
Q Consensus 62 ~h~~--~v~~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~ 136 (288)
.|.. -...+.|++ +.++.+.+.. ..|+.+|+.+++.+..+..... .......+.++.| ...-.++.+.+||.
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 4543 366899986 4566666654 4899999999998888763322 2222222234444 44457899999999
Q ss_pred CCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccC-----CCeEEEEEcCCCCEEEEEeC
Q 023018 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 137 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~~~~ 211 (288)
.+.+.+.++..... -..+++ ++..|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|+.++....
T Consensus 93 ~tl~~~~ti~~~~~-Gwglt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 93 ATLTPRARFRYPGE-GWALTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TTTEEEEEEECSSC-CCEEEE--CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcCcEEEEEeCCCC-ceEEee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 99999999885443 245554 56666666678999999999998887776422 245666766 5555555546
Q ss_pred CCeEEEEeCCCCceeEEEcCCC----------ccccCeEEEEEcCCCCEEEEEe
Q 023018 212 DATLRVWNPKSGENIHVIRGHP----------YHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 212 dg~i~i~d~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
+..|.+.|.++++.+..+.... ....-.+.++++|+++.|++.+
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 8899999999999888876331 1223568999999776666554
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.26 E-value=3e-09 Score=82.52 Aligned_cols=180 Identities=17% Similarity=0.197 Sum_probs=126.4
Q ss_pred eeeEeeccccCc--EEEEEEecCCCEEEEEeCCC--eEEEEeCCCCceeEEeccCCCC-EEEEEEcCCCCEEEE-ecCCC
Q 023018 98 DWASEIQGHKDS--VSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLKCTLEGPGGG-VEWVSWHPRGHIVLA-GSEDS 171 (288)
Q Consensus 98 ~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~-~~~dg 171 (288)
+.+.++. |... ...+.|+ ++.++.+++.+| .|+++|+.+++.+..+...... --.++.. +..|+. .-.++
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC
Confidence 3455564 4433 3678888 666666666666 8999999999998888654332 1234443 444444 44589
Q ss_pred eEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC--ccccCeEEEEEcCCCC
Q 023018 172 TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP--YHTEGLTCLTISADST 249 (288)
Q Consensus 172 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 249 (288)
.+.+||..+.+.+.++...... .. ++++++.|+.+..++.|.++|..+.+.+..+.... ..-..++.+.|. +|.
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG-~g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEG-WG--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCC-CC--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECccCcEEEEEECCCCc-eE--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 9999999999999988853322 23 34577888887778899999999999888876521 011335567776 676
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEEEec----------------ceEEEEEeec
Q 023018 250 LALSGSKDGSVHMVNITTGKVCCLNF----------------QYTCVAYDLD 285 (288)
Q Consensus 250 ~l~~~~~dg~i~iwd~~t~~~~~~~~----------------~~~~~~~~~d 285 (288)
+.+..-.++.|.+.|..+|+++..+. ...++||+|+
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 55555568899999999999998871 3477888874
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=1.5e-09 Score=97.66 Aligned_cols=197 Identities=9% Similarity=0.040 Sum_probs=127.2
Q ss_pred EEEEEcCCCCcEEEEEeCC-------------CeEEEEEccCCe----eeEeecc-ccCcEEEEEEecCCCEEEEEeC--
Q 023018 68 YSVACSPTDATLVATGGGD-------------DKGFFWRINQGD----WASEIQG-HKDSVSSLAFSMDGQLLASGGL-- 127 (288)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~d-------------g~i~iw~~~~~~----~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-- 127 (288)
..++|+ ++. .|+.++.+ ..|++|++.+.. .+..... |......+.|+|++++|+....
T Consensus 178 ~~~~Ws-Dg~-~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNE-GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTT-EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCC-EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 467888 554 44455544 349999987754 2333333 4455788999999998765432
Q ss_pred --CCeEEEEeCCCCc-eeEEeccCCCCEEEEEEcCCCCEEEE-ecC---CCeEEEEECCcccE--EEEeeccCCCeEEEE
Q 023018 128 --DGLVQIWDPSSGN-LKCTLEGPGGGVEWVSWHPRGHIVLA-GSE---DSTVWMWNADRAAY--LNMFSGHGSSVTCGD 198 (288)
Q Consensus 128 --dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~---dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~ 198 (288)
...|+++++.++. ....+..+....... |++++..|+. +.. .+.|..+++.++.. ...+..+...+. .
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T 332 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence 3589999998763 344455555555554 5555555544 433 36799999987643 234555555554 8
Q ss_pred EcCCCCEEEEEeCCC---eEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCcEE
Q 023018 199 FTPDGKTICTGSDDA---TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD----GSVHMVNITTGKVC 271 (288)
Q Consensus 199 ~~p~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~t~~~~ 271 (288)
|++++++|+....++ .|++|++..+ ....+... ....+..+.+++++..|+....+ +.|+.||+.+++..
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p--~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALP--GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCS--SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecC--CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 899898887766544 6899998744 44454422 33456677788887766654443 88999999888754
Q ss_pred E
Q 023018 272 C 272 (288)
Q Consensus 272 ~ 272 (288)
.
T Consensus 410 ~ 410 (693)
T 3iuj_A 410 L 410 (693)
T ss_dssp E
T ss_pred E
Confidence 3
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.21 E-value=8.7e-09 Score=79.94 Aligned_cols=169 Identities=12% Similarity=0.074 Sum_probs=120.3
Q ss_pred eeeEeeccccCc--EEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCC-EEEEEEcCCCCEEEEecCCCeEE
Q 023018 98 DWASEIQGHKDS--VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-VEWVSWHPRGHIVLAGSEDSTVW 174 (288)
Q Consensus 98 ~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~ 174 (288)
+.+.++. |... ...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ ..... --.+++.. ++++++.-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEE
Confidence 3455554 4432 3678887 3556677778899999999999988877 33321 23355543 34555555789999
Q ss_pred EEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC--ccccCeEEEEEcCCCCEEE
Q 023018 175 MWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP--YHTEGLTCLTISADSTLAL 252 (288)
Q Consensus 175 i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~ 252 (288)
+||..+.+.+.++..... -..++ ++++.|+.+..++.|.++|..+.+.+..+.... ..-..++.+.|. +|.+.+
T Consensus 120 V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya 195 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA 195 (268)
T ss_dssp EEETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence 999999999998885332 23444 568889888889999999999999888876522 112245677777 676555
Q ss_pred EEeCCCcEEEEEcCCCcEEEEe
Q 023018 253 SGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 253 ~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
..-.++.|.+.|..+|+++..+
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEE
T ss_pred EECCCCeEEEEeCCCCcEEEEE
Confidence 5546789999999999999887
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.21 E-value=9.5e-09 Score=85.42 Aligned_cols=192 Identities=11% Similarity=0.077 Sum_probs=125.2
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeeccc---------cCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccC
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGH---------KDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGP 148 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 148 (288)
..+++++.++.|+.+|..+++.+..+... ...+.+. ....+..+++++.++.|..+|..+++.+......
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 45667778899999999999887665532 2223222 2224567888889999999999999988776644
Q ss_pred CCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCe-----EEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 023018 149 GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV-----TCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (288)
Q Consensus 149 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-----~~~~~~p~~~~l~~~~~dg~i~i~d~~~~ 223 (288)
.......... +..+++++.++.|..+|.++++.+..+....... ..... .+..+++++.++.|..+|..++
T Consensus 133 ~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 133 GEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp SCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTC
T ss_pred CceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCC
Confidence 3221112222 4578888889999999999999887766432211 11122 2457888888999999999999
Q ss_pred ceeEEEcCCCcccc----CeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 224 ENIHVIRGHPYHTE----GLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 224 ~~~~~~~~~~~~~~----~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+.+........... .+..+...| .+..+++++.+|.+..+|..+|+.+...
T Consensus 209 ~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 209 QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp CEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred cEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec
Confidence 88776653210000 000011111 2456677778889999999999887655
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.21 E-value=1.1e-09 Score=94.31 Aligned_cols=193 Identities=11% Similarity=0.049 Sum_probs=139.5
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeEeecc-ccCcEEEEEE-e-cCCCEEEEEe------------------CCCeEEEE
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAF-S-MDGQLLASGG------------------LDGLVQIW 134 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~-~-~~~~~l~~~~------------------~dg~i~i~ 134 (288)
+..++++...+++|.+.|+.+.+....+.- .......+++ . |+++++++++ .++.+.+.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 334555555677899999999997774432 2345778888 4 8999998884 24679999
Q ss_pred eCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCC--------------------------------------eEEEE
Q 023018 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS--------------------------------------TVWMW 176 (288)
Q Consensus 135 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------------------------------~i~i~ 176 (288)
|..+.+....+.... ....++++|+|+++++++.+. .|.+.
T Consensus 181 D~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 181 DADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp ETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred ECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 999998888877544 457788999999998887543 36677
Q ss_pred ECCc--ccE-EEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc------------eeEEEcCCCccccCeE
Q 023018 177 NADR--AAY-LNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGE------------NIHVIRGHPYHTEGLT 240 (288)
Q Consensus 177 d~~~--~~~-~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~~~~v~ 240 (288)
|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ ....+. ......
T Consensus 260 D~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~----vG~gP~ 334 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE----LGLGPL 334 (595)
T ss_dssp ECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB----CCSCEE
T ss_pred eCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC----CCCCcc
Confidence 7766 433 344432 23457889999999987766 57799999998653 222222 446688
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCC----------CcEEEEe
Q 023018 241 CLTISADSTLALSGSKDGSVHMVNITT----------GKVCCLN 274 (288)
Q Consensus 241 ~~~~~~~~~~l~~~~~dg~i~iwd~~t----------~~~~~~~ 274 (288)
.++|+|+|...++.--+++|.+|++.+ .+.+.++
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~ki 378 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKL 378 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEE
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEe
Confidence 999999995455666799999999987 5666666
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=1.2e-12 Score=108.91 Aligned_cols=147 Identities=17% Similarity=0.176 Sum_probs=85.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCC-CeE-
Q 023018 118 DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS-SVT- 195 (288)
Q Consensus 118 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~i~- 195 (288)
++..+++++.||.|+.||..+++.+..+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999999888876 4455555556777888888999999999998887666543211 010
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+..+. .+..|++++.++.|+.||..+|+.+..+... . ...++|++..|++++.++.|+.||..+|+.+..+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~---~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA---F----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC---C----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 00111 3457888888999999999999987776542 1 1345667888899999999999999999876554
No 239
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.19 E-value=6.2e-08 Score=75.50 Aligned_cols=205 Identities=13% Similarity=0.121 Sum_probs=135.1
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc-ccCcEEEEEEecCCCEEEEEeCCCeEEEEeCC
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 137 (288)
.+.+-.+.+..++|+|.++.++++...++.|...|.. ++.+..+.- -....-.+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3445567899999999667777778889999999988 777777642 12456788898888766666577889999876
Q ss_pred CCce---eEEec------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECC---cccEEEEee-------ccCCCeEEEE
Q 023018 138 SGNL---KCTLE------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD---RAAYLNMFS-------GHGSSVTCGD 198 (288)
Q Consensus 138 ~~~~---~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~-------~~~~~i~~~~ 198 (288)
.... +.... ......-.++|+|.++.|+++.......+|.+. ....+..+. .+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5442 22221 123457899999988777776654444444442 111122221 1234578999
Q ss_pred EcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEcCCCcc------ccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 199 FTPDG-KTICTGSDDATLRVWNPKSGENIHVIRGHPYH------TEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 199 ~~p~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
++|.. .+++.+.....|.++|.. ++.+..+.-.... ....-.|+|.++|++.++ ++.+.++.+.-.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 99954 455666677789999976 5566555433211 236688999999985554 677777776543
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.19 E-value=2.7e-08 Score=76.51 Aligned_cols=170 Identities=15% Similarity=0.134 Sum_probs=119.4
Q ss_pred eeeEeeccccC--cEEEEEEecCCCEEEEEeCC--CeEEEEeCCCCceeEEeccCCCC-EEEEEEcCCCCEEEEecCCCe
Q 023018 98 DWASEIQGHKD--SVSSLAFSMDGQLLASGGLD--GLVQIWDPSSGNLKCTLEGPGGG-VEWVSWHPRGHIVLAGSEDST 172 (288)
Q Consensus 98 ~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~ 172 (288)
+.+.+++ |.. -...+.|+. +.++.+.+.. ..|+.+|+.+++.+..+...... --.++.. .++++...-.++.
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 3455554 543 356888986 5555566654 48999999999998887654432 1334443 2344555556899
Q ss_pred EEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC--ccccCeEEEEEcCCCCE
Q 023018 173 VWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP--YHTEGLTCLTISADSTL 250 (288)
Q Consensus 173 i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~ 250 (288)
+.+||..+.+.+.++.....+ ..++ +++..|+++..++.|.++|..+.+.+..+.... ..-..++-+.|. +|.+
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 999999999999998854332 3444 567888888889999999999998888876521 011345667766 6665
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 251 ALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 251 l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+..-.+..|.+.|..+|+++..+
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEE
Confidence 555546789999999999999887
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.19 E-value=5.9e-09 Score=89.90 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=145.3
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeec-----------------------------------c----ccCcEEEEEEec-
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQ-----------------------------------G----HKDSVSSLAFSM- 117 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~-----------------------------------~----~~~~i~~~~~~~- 117 (288)
..|.+|+..|.++|+-+.+++.+..+. + ..+.......|.
T Consensus 16 ~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t 95 (595)
T 1fwx_A 16 YGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFT 95 (595)
T ss_dssp EEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEE
T ss_pred EEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCC
Confidence 356788899999999998887666541 0 011222344444
Q ss_pred ----CCCEEEEEeC-CCeEEEEeCCCCceeEEeccC-CCCEEEEEE-c-CCCCEEEEec------------------CCC
Q 023018 118 ----DGQLLASGGL-DGLVQIWDPSSGNLKCTLEGP-GGGVEWVSW-H-PRGHIVLAGS------------------EDS 171 (288)
Q Consensus 118 ----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~-~-~~~~~l~~~~------------------~dg 171 (288)
+|+++++... ++.|.+.|+.+.+....+..+ ...+..+++ + |++.++++++ .++
T Consensus 96 ~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 96 EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 7887777654 567999999999987755433 245888898 5 8999988884 245
Q ss_pred eEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------
Q 023018 172 TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA-------------------------------------- 213 (288)
Q Consensus 172 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg-------------------------------------- 213 (288)
.+.++|..+.+.+.++.... ....++++|+|+++++.+.+.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 79999999998888877433 456788999999999888553
Q ss_pred eEEEEeCCC--Cce-eEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCc------------EEEEe---
Q 023018 214 TLRVWNPKS--GEN-IHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGK------------VCCLN--- 274 (288)
Q Consensus 214 ~i~i~d~~~--~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t~~------------~~~~~--- 274 (288)
.|.|.|.++ +.. +..+. ......++.++|||+++++++ .+.+|.++|+.+.+ .....
T Consensus 255 ~V~VID~~~~~~~~~~~~Ip----vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIP----IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEE----EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred cEEEEeCcccCCceeEEEEe----cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC
Confidence 367777776 444 44444 233567789999999887665 57899999999763 34444
Q ss_pred cceEEEEEeec
Q 023018 275 FQYTCVAYDLD 285 (288)
Q Consensus 275 ~~~~~~~~~~d 285 (288)
.+...++|+++
T Consensus 331 ~gP~h~aF~~d 341 (595)
T 1fwx_A 331 LGPLHTAFDGR 341 (595)
T ss_dssp SCEEEEEECTT
T ss_pred CCcceEEECCC
Confidence 56778888775
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.17 E-value=2e-08 Score=83.43 Aligned_cols=186 Identities=13% Similarity=0.085 Sum_probs=126.9
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCE-----
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGV----- 152 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i----- 152 (288)
..+++++.++.|+.+|..+++.+..+............. +..+++++.++.|..+|..+++.+..+.......
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 456678888999999999998877665332221112222 4478888899999999999999887765432211
Q ss_pred EEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCC----eE---EEEEcC--CCCEEEEEeCCCeEEEEeCCCC
Q 023018 153 EWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSS----VT---CGDFTP--DGKTICTGSDDATLRVWNPKSG 223 (288)
Q Consensus 153 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----i~---~~~~~p--~~~~l~~~~~dg~i~i~d~~~~ 223 (288)
...... +..+++++.++.+..+|..+++.+......... +. .+...| .+..+++++.++.|..+|..++
T Consensus 182 ~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 112222 457888888999999999999887766532110 00 011122 3567888888999999999999
Q ss_pred ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 224 ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+.+..... .....+.. ++..|++++.+|.|..+|..+|+.+...
T Consensus 260 ~~~w~~~~-----~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 260 QIMWKREL-----GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp CEEEEECC-----CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred cEEeeccC-----CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 88766552 22333433 3567788888999999999999987665
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.16 E-value=1.7e-07 Score=73.96 Aligned_cols=189 Identities=10% Similarity=-0.040 Sum_probs=120.2
Q ss_pred EEEEeCCCeEEEEEccCCeee-----EeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCceeEEeccCCCCEE
Q 023018 80 VATGGGDDKGFFWRINQGDWA-----SEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKCTLEGPGGGVE 153 (288)
Q Consensus 80 l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 153 (288)
|+.+.. +.|+.+++...... ..+.........++|++++..|+.+ ...+.|..+++........+........
T Consensus 4 l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~ 82 (267)
T 1npe_A 4 LLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE 82 (267)
T ss_dssp EEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE
T ss_pred EEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc
Confidence 334333 57888888754321 1222223456789999976655555 4578999999876654444433335689
Q ss_pred EEEEcCCCC-EEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeEEE
Q 023018 154 WVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD---DATLRVWNPKSGENIHVI 229 (288)
Q Consensus 154 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~---dg~i~i~d~~~~~~~~~~ 229 (288)
.+++++.+. ++++-...+.|.++++..................++++|++..|+.+.. .+.|..+++.. .....+
T Consensus 83 ~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~ 161 (267)
T 1npe_A 83 GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRIL 161 (267)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEE
T ss_pred EEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEE
Confidence 999999655 4555556789999998654322222222246789999997777766654 36888888753 333333
Q ss_pred cCCCccccCeEEEEEcCCCCEEEE-EeCCCcEEEEEcCCCcEEE
Q 023018 230 RGHPYHTEGLTCLTISADSTLALS-GSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~t~~~~~ 272 (288)
... .......++++|++..|+. -...+.|.++++.++....
T Consensus 162 ~~~--~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 162 AQD--NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp ECT--TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred EEC--CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 211 2345788999997766554 4456899999998654433
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.16 E-value=4.2e-07 Score=74.76 Aligned_cols=207 Identities=11% Similarity=0.002 Sum_probs=135.0
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEEEEeCCCCcee
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLK 142 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~ 142 (288)
...+..++|.+.++.++++-...+.|..+++........+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 34578999998667777776677899999987665444333222344678898765555 44456789999998765444
Q ss_pred EEeccCCCCEEEEEEcCCCCEEE-EecCC-CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEe
Q 023018 143 CTLEGPGGGVEWVSWHPRGHIVL-AGSED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWN 219 (288)
Q Consensus 143 ~~~~~~~~~i~~~~~~~~~~~l~-~~~~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d 219 (288)
..+.........++++|.+..|+ +-... +.|..+++............-.....|+++|++..|+.+. ..+.|..+|
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 44444445689999999555444 44444 7899998864432222222334578999999777776665 466899999
Q ss_pred CCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+........+.. .......+++. .+.++++-...+.|..++..+|+.+..+
T Consensus 232 ~dG~~~~~~~~~---~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDGSHRKAVISQ---GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTSCSCEEEECS---SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCceEEEEeC---CCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 864433333332 23456677773 4556666666788999997777665554
No 245
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.16 E-value=2.9e-07 Score=76.85 Aligned_cols=207 Identities=11% Similarity=0.000 Sum_probs=135.8
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEEEEeCCCCcee
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLK 142 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~ 142 (288)
...+..++|.+.++.++++-...+.|..+++........+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 34578899998667777777777899999987665433333222334678888765555 44455678999988755444
Q ss_pred EEeccCCCCEEEEEEcCCCCEEEEec-CC-CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEe
Q 023018 143 CTLEGPGGGVEWVSWHPRGHIVLAGS-ED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWN 219 (288)
Q Consensus 143 ~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d 219 (288)
..+.........++++|.+..|+.+. .. +.|..+++............-.....|+++|++..|+.+. ..+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 44444445689999998666555543 44 7899998865433222222334578999998777776665 466899999
Q ss_pred CCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+........+.. .......+++ ..+.++++-...+.|..++..+|+.+..+
T Consensus 275 ~dG~~~~~~~~~---~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 275 LDGSHRKAVISQ---GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp TTSCSCEEEECS---SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCeeEEEEEC---CCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 864433333332 2345677787 34556666667789999997777766555
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=6.3e-09 Score=93.13 Aligned_cols=182 Identities=14% Similarity=0.185 Sum_probs=127.6
Q ss_pred EEEEEcCCCCcEEEEEeCCC-------------------eEEEEEccCCeeeEeecc--cc-------CcEEEEEEecCC
Q 023018 68 YSVACSPTDATLVATGGGDD-------------------KGFFWRINQGDWASEIQG--HK-------DSVSSLAFSMDG 119 (288)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~dg-------------------~i~iw~~~~~~~~~~~~~--~~-------~~i~~~~~~~~~ 119 (288)
..+++.| ...+++.++.++ .|..+|..+++.+..++. |. .....+....+|
T Consensus 246 ~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp SCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred cceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 3577888 555666666553 599999999998877653 21 112223344467
Q ss_pred ---CEEEEEeCCCeEEEEeCCCCceeEEeccCCC-----------CE------------------------EEEEEcCCC
Q 023018 120 ---QLLASGGLDGLVQIWDPSSGNLKCTLEGPGG-----------GV------------------------EWVSWHPRG 161 (288)
Q Consensus 120 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------~i------------------------~~~~~~~~~ 161 (288)
..+++++.+|.|+++|..+++.+..+..... ++ ..++++|+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 5788999999999999999998776542210 01 146888988
Q ss_pred CEEEEecC-------------------------------------------CCeEEEEECCcccEEEEeeccCCCeEEEE
Q 023018 162 HIVLAGSE-------------------------------------------DSTVWMWNADRAAYLNMFSGHGSSVTCGD 198 (288)
Q Consensus 162 ~~l~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 198 (288)
.++++... .|.|..||+.+++.+..+. +..++....
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~ 483 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGT 483 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCE
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcc
Confidence 87777532 2789999999999888776 334444555
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEE
Q 023018 199 FTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS 253 (288)
Q Consensus 199 ~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 253 (288)
+...+..+++++.+|.+++||.++++.+..+.... .....-+.|.++|+.+++
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~--~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT--GVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS--CCCSCCEEEEETTEEEEE
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC--CcccCCEEEEeCCEEEEE
Confidence 66678899999999999999999999998887532 122233566678865443
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.14 E-value=4.9e-09 Score=85.28 Aligned_cols=183 Identities=20% Similarity=0.157 Sum_probs=128.7
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEE
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSW 157 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 157 (288)
..+..++.++.|..++.. ++....+......+.++...+++. +.+++.++.|..+|.. ++....+......+.++..
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 356677788999999988 766666654555566667766665 6667778999999988 8777766655556777778
Q ss_pred cCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCcccc
Q 023018 158 HPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTE 237 (288)
Q Consensus 158 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 237 (288)
.+++.+++. + +.|..|| .+++.+..+......+.++...+++. |++++.++.|..+|. ++..+..+... ..
T Consensus 185 d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~---~~ 255 (330)
T 3hxj_A 185 GKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTG---KR 255 (330)
T ss_dssp CTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECS---SC
T ss_pred cCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCC---CC
Confidence 777765544 4 8899999 77777776665556678888887764 566777888988985 56665555432 22
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+..+.+.+++ .|.+++.+|.|..+|. +++.+..+
T Consensus 256 ~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~ 290 (330)
T 3hxj_A 256 IESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNF 290 (330)
T ss_dssp CCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEE
T ss_pred ccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEE
Confidence 23345555555 4566778889999995 77766654
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.13 E-value=7.5e-07 Score=72.22 Aligned_cols=208 Identities=9% Similarity=-0.003 Sum_probs=132.7
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC----CeeeEeeccccCcEEEEEEecCCCEEE-EEeCCCeEEEEeCCC
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSS 138 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~ 138 (288)
-....+++|.+.++.++++-...+.|..+++.. ......+...-.....+++.+.+..|+ +-...+.|.++++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 345789999986667777777778999999875 222222322223447888987555554 445678999999875
Q ss_pred CceeEEeccCCCCEEEEEEcCCCCEEEEecC-C-CeEEEEECCcccEEEEe-eccCCCeEEEEEcCCCCEEEEEe-CCCe
Q 023018 139 GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-D-STVWMWNADRAAYLNMF-SGHGSSVTCGDFTPDGKTICTGS-DDAT 214 (288)
Q Consensus 139 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~p~~~~l~~~~-~dg~ 214 (288)
......+.........++++|.+..|+.+.. . +.|..+++.... ...+ ...-.....|+++|++..|+.+. ..+.
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 5443334434456899999996665555443 3 789888875432 3332 22335678999999887777665 4568
Q ss_pred EEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|..+|+... ....+............+++. .+.++++-...+.|..++..+|+.+..+
T Consensus 188 I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 188 ISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 999998743 333332211122345677775 3556666667789999998888765554
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=1.9e-08 Score=89.90 Aligned_cols=185 Identities=14% Similarity=0.182 Sum_probs=129.6
Q ss_pred CCeEEEEEccCCeeeEeecccc-------------------------------CcEEEEEEecCCCEEEEEeCCC-----
Q 023018 86 DDKGFFWRINQGDWASEIQGHK-------------------------------DSVSSLAFSMDGQLLASGGLDG----- 129 (288)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~-------------------------------~~i~~~~~~~~~~~l~~~~~dg----- 129 (288)
+|.|+.+|..+++.+..+.... .....+++.|...+++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999887764210 0112467888888888887766
Q ss_pred --------------eEEEEeCCCCceeEEeccC--C-------CCEEEEEEcCCCC---EEEEecCCCeEEEEECCcccE
Q 023018 130 --------------LVQIWDPSSGNLKCTLEGP--G-------GGVEWVSWHPRGH---IVLAGSEDSTVWMWNADRAAY 183 (288)
Q Consensus 130 --------------~i~i~d~~~~~~~~~~~~~--~-------~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 183 (288)
.|..+|..+++.+..++.. . .+.....+..+++ .++.++.+|.++++|..+++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 4999999999998887642 1 2333333333564 688999999999999999988
Q ss_pred EEEeeccC------------CCe------------------------EEEEEcCCCCEEEEEe-----------------
Q 023018 184 LNMFSGHG------------SSV------------------------TCGDFTPDGKTICTGS----------------- 210 (288)
Q Consensus 184 ~~~~~~~~------------~~i------------------------~~~~~~p~~~~l~~~~----------------- 210 (288)
+....... .++ ..++++|+...+++..
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 74433111 000 1257788766666421
Q ss_pred -------------------CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 211 -------------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 211 -------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
.+|.|..||+.+++.+...... .+.....+...+.++++++.||.|++||..+|+.+
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP----THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC----CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 2378999999999988776532 22333344456778899999999999999999999
Q ss_pred EEe
Q 023018 272 CLN 274 (288)
Q Consensus 272 ~~~ 274 (288)
..+
T Consensus 493 ~~~ 495 (668)
T 1kv9_A 493 WQF 495 (668)
T ss_dssp EEE
T ss_pred eEe
Confidence 876
No 250
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.12 E-value=2.6e-09 Score=88.21 Aligned_cols=186 Identities=11% Similarity=-0.027 Sum_probs=125.6
Q ss_pred CCCCeeEeecCCCCEEEEEEcCCCCcEEEEEe----------CCCeEEEEEccCCeeeEeeccc-------cCcEEEEEE
Q 023018 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGG----------GDDKGFFWRINQGDWASEIQGH-------KDSVSSLAF 115 (288)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~-------~~~i~~~~~ 115 (288)
..+.+..+.....+ .++++| +++.++++. .++.|.+||+.+++.+.++... ......+.+
T Consensus 55 t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 55 CGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE
Confidence 34555666555566 799999 555555554 3688999999999999888633 122357899
Q ss_pred ecCCCEEEEEeC--CCeEEE--EeCCC-----------------------------------------Ccee--------
Q 023018 116 SMDGQLLASGGL--DGLVQI--WDPSS-----------------------------------------GNLK-------- 142 (288)
Q Consensus 116 ~~~~~~l~~~~~--dg~i~i--~d~~~-----------------------------------------~~~~-------- 142 (288)
+|+|++++++.. ...|.+ +|+.+ ++..
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~ 211 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN 211 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeee
Confidence 999999888864 457888 87743 0000
Q ss_pred ----------------------EEeccCCC-----------------------CEEEEEEcCCCCEEEEecC--------
Q 023018 143 ----------------------CTLEGPGG-----------------------GVEWVSWHPRGHIVLAGSE-------- 169 (288)
Q Consensus 143 ----------------------~~~~~~~~-----------------------~i~~~~~~~~~~~l~~~~~-------- 169 (288)
..+..... ....++++|+++.++++..
T Consensus 212 vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 212 CSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp BCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred CCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 00000000 0001678888887776543
Q ss_pred -CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCE-EEEEe-CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcC
Q 023018 170 -DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKT-ICTGS-DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (288)
Q Consensus 170 -dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~-l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (288)
++.+.++|+.+.+.+..+.... ....+.|+|++++ +++.. .++.|.++|+.+++.+..+.. ......+++.+
T Consensus 292 ~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v----g~~P~~i~~~~ 366 (368)
T 1mda_H 292 AAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL----DKGPESLSVQN 366 (368)
T ss_dssp CEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC----CSCCCEEECCC
T ss_pred cCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC----CCCCCEEEeec
Confidence 2356699999999888887443 6889999999985 55666 589999999999999988874 23344555543
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.11 E-value=5.8e-09 Score=93.55 Aligned_cols=195 Identities=15% Similarity=0.188 Sum_probs=131.1
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeeccccC----------cE-EEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEec
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGHKD----------SV-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~----------~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 146 (288)
..+++++.++.|+.+|..+++.+-.+..... .+ ..+.+ .+..+++++.|+.|..+|..+|+.+..+.
T Consensus 71 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 71 GVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 3566677789999999999998887753221 00 11222 35578888999999999999999887766
Q ss_pred cC-C-CCEEEEEEcC--CCCEEEEec------CCCeEEEEECCcccEEEEeeccC-------------------------
Q 023018 147 GP-G-GGVEWVSWHP--RGHIVLAGS------EDSTVWMWNADRAAYLNMFSGHG------------------------- 191 (288)
Q Consensus 147 ~~-~-~~i~~~~~~~--~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~------------------------- 191 (288)
.. . .....+..+| .+..+++++ .+|.|+.||.++++.+..+....
T Consensus 149 ~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~ 228 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYV 228 (689)
T ss_dssp CCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHH
T ss_pred CcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceee
Confidence 42 1 1111111122 133455543 36899999999999887765210
Q ss_pred ------CCeEEEEEcCCCCEEEEEeCCCe-------------------EEEEeCCCCceeEEEcCCCc------cccCeE
Q 023018 192 ------SSVTCGDFTPDGKTICTGSDDAT-------------------LRVWNPKSGENIHVIRGHPY------HTEGLT 240 (288)
Q Consensus 192 ------~~i~~~~~~p~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~~~~~~~~------~~~~v~ 240 (288)
.....++++|+...+++++.++. |..||..+|+.+..+..... ...++.
T Consensus 229 ~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~ 308 (689)
T 1yiq_A 229 EQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMI 308 (689)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred ecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcE
Confidence 01125788898899999887764 99999999999887764210 111222
Q ss_pred EEEEcCCCC---EEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 241 CLTISADST---LALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 241 ~~~~~~~~~---~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
......+|. .|+.++.+|.++++|..||+++...
T Consensus 309 l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 309 LAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 222233564 7888999999999999999998543
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.10 E-value=2.5e-06 Score=71.43 Aligned_cols=210 Identities=8% Similarity=0.001 Sum_probs=135.9
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----eeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEEEEeCC
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPS 137 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~ 137 (288)
.-..+.+++|++.++.++++-...+.|+.+++... .....+.........+++.+.+..| ++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34567899999866666666666788988888652 2233333233456789998855544 444567899999987
Q ss_pred CCceeEEeccCCCCEEEEEEcCCCCEEEEecC--CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCe
Q 023018 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDAT 214 (288)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~ 214 (288)
.......+.........|+++|.+..|+.+.. .+.|...++............-.....|+++|++..|+.+. ..+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 66555555444456899999996665555442 47899998865433333333335678999999888887765 4568
Q ss_pred EEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|..+|+........+... ........+++. .+.++++-...+.|..++..+|+.+..+
T Consensus 270 I~~~d~dG~~~~~~~~~~-~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDE-KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp EEEEETTSCCCEEEEECS-STTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred EEEEeCCCCccEEEEeCC-CCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 999998654333333221 122345567763 3455566666789999998888766655
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.10 E-value=7.6e-09 Score=84.17 Aligned_cols=196 Identities=17% Similarity=0.135 Sum_probs=131.3
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeC
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (288)
...+..+...+.++...+ ++. ++.++.++.|..++.. ++....+......+.++...+++.+ .+++ +.|..+|
T Consensus 129 ~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l-~v~t--~~l~~~d- 201 (330)
T 3hxj_A 129 KWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTI-YFGS--DKVYAIN- 201 (330)
T ss_dssp EEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCE-EEES--SSEEEEC-
T ss_pred EEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEE-EEEe--CEEEEEC-
Confidence 333443444455556655 444 5567778999999988 7766666555556677777777764 4444 7899999
Q ss_pred CCCceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 023018 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLR 216 (288)
Q Consensus 137 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~ 216 (288)
.+++....+......+.++...+++. |.+++.++.+..++. +++.+..+......+..+.+.+++ .|++++.+|.|.
T Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~ 278 (330)
T 3hxj_A 202 PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLY 278 (330)
T ss_dssp TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEE
T ss_pred CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEE
Confidence 77777777665556688888888765 555666788888874 566666665444444445555554 577788888999
Q ss_pred EEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 217 VWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 217 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
.+|. +++.+..+.. ....+.++...+++.+ ..++.+|.+++.....
T Consensus 279 ~~d~-~g~~~~~~~~---~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 279 AINP-DGTEKWNFET---GSWIIATPVIDENGTI-YFGTRNGKFYALFNLE 324 (330)
T ss_dssp EECT-TSCEEEEEEC---SSCCCSCCEECTTCCE-EEECTTSCEEEEEC--
T ss_pred EECC-CCcEEEEEEc---CCccccceEEcCCCEE-EEEcCCCeEEEEeccc
Confidence 9996 6776666553 3344666677777764 5688999999887654
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.08 E-value=4.3e-08 Score=86.02 Aligned_cols=184 Identities=12% Similarity=0.099 Sum_probs=125.6
Q ss_pred CCeEEEEEccCCeeeEeeccccCc-------------------------------------E-EEEEEecCCCEEEEEeC
Q 023018 86 DDKGFFWRINQGDWASEIQGHKDS-------------------------------------V-SSLAFSMDGQLLASGGL 127 (288)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~~~~~~~l~~~~~ 127 (288)
+|.|+.+|..+++.+.++...... + ..+++.+....++.+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 789999999999887765421110 0 13566676666766653
Q ss_pred C----------------CeEEEEeCCCCceeEEeccC----------CCCEEEEEEcCCCC---EEEEecCCCeEEEEEC
Q 023018 128 D----------------GLVQIWDPSSGNLKCTLEGP----------GGGVEWVSWHPRGH---IVLAGSEDSTVWMWNA 178 (288)
Q Consensus 128 d----------------g~i~i~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~ 178 (288)
+ +.|..+|..+++.+..++.. ..++. +....+|+ .++.++.+|.++++|.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~ 333 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNR 333 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEEC
Confidence 2 36999999999988877532 12221 22224663 5778889999999999
Q ss_pred CcccEEEEeeccC-------------CCe--------------------------EEEEEcCCCCEEEEEe---------
Q 023018 179 DRAAYLNMFSGHG-------------SSV--------------------------TCGDFTPDGKTICTGS--------- 210 (288)
Q Consensus 179 ~~~~~~~~~~~~~-------------~~i--------------------------~~~~~~p~~~~l~~~~--------- 210 (288)
.+++.+..+.... .++ ..++++|+..+|++..
T Consensus 334 ~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~ 413 (571)
T 2ad6_A 334 ENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEP 413 (571)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccc
Confidence 9998877654221 111 2357888777777654
Q ss_pred ----------------------------CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 023018 211 ----------------------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (288)
Q Consensus 211 ----------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 262 (288)
.+|.|..||+.+++.+..+... ..+....+...+..+++++.||.|+.
T Consensus 414 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~v~~g~~dg~l~a 489 (571)
T 2ad6_A 414 FMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK----FAAWGGTLYTKGGLVWYATLDGYLKA 489 (571)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES----SCCCSBCEEETTTEEEEECTTSEEEE
T ss_pred cccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC----CCccceeEEECCCEEEEEcCCCeEEE
Confidence 3478999999999987776532 22222222334567778999999999
Q ss_pred EEcCCCcEEEEe
Q 023018 263 VNITTGKVCCLN 274 (288)
Q Consensus 263 wd~~t~~~~~~~ 274 (288)
||.++|+++..+
T Consensus 490 ~D~~tG~~lw~~ 501 (571)
T 2ad6_A 490 LDNKDGKELWNF 501 (571)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999999999876
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.07 E-value=1.7e-07 Score=76.19 Aligned_cols=207 Identities=8% Similarity=0.001 Sum_probs=131.4
Q ss_pred eecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec-------------------cccCcEEEEEEec-CC
Q 023018 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ-------------------GHKDSVSSLAFSM-DG 119 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~~~~i~~~~~~~-~~ 119 (288)
+.+.-....+++|.+ ++.+++++..++.|..|+..++....... ........+++.+ ++
T Consensus 14 ~~g~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp EECSSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred cCCccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 333334457788998 67767778888999999887654322110 0123568899997 55
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEecc----CCCCEEEEEEcC-CCCEEEEecC-----------------CCeEEEEE
Q 023018 120 QLLASGGLDGLVQIWDPSSGNLKCTLEG----PGGGVEWVSWHP-RGHIVLAGSE-----------------DSTVWMWN 177 (288)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~-~~~~l~~~~~-----------------dg~i~i~d 177 (288)
.|+++...+.|..++..++........ .......+++.+ +|+++++-.. .+.|..||
T Consensus 93 -~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 93 -QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp -EEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred -cEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 455555455588888775543222111 123478899999 8987776432 36799999
Q ss_pred CCcccEEEEeeccCCCeEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCc--eeEEEcCCCccccCeEEEEEcCCCCEEEEE
Q 023018 178 ADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNPKSGE--NIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (288)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 254 (288)
..+++...... .-.....++++|++++|+++ +..+.|.+|++.... ....+.. ... ...+++.++|++.++.
T Consensus 172 ~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 172 PSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp TTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEE
T ss_pred CCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEe
Confidence 87665432222 22345679999999977666 456889999987421 1222221 112 6789999999877665
Q ss_pred eC----------CCcEEEEEcCCCcEEEEe
Q 023018 255 SK----------DGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 255 ~~----------dg~i~iwd~~t~~~~~~~ 274 (288)
.. .+.|..++. .|+.+..+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~ 275 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDE-FGNILEVI 275 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECT-TSCEEEEE
T ss_pred cCcccccccCCCccEEEEECC-CCCEEEEE
Confidence 44 467888886 47766655
No 256
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.07 E-value=7.8e-09 Score=86.82 Aligned_cols=146 Identities=14% Similarity=0.060 Sum_probs=106.0
Q ss_pred cCCCEEEEEeCC-----CeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEec----------CCCeEEEEECCcc
Q 023018 117 MDGQLLASGGLD-----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWNADRA 181 (288)
Q Consensus 117 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~ 181 (288)
+++++++++... +.|.++|..+++.+..+.....+ .++++|++++++++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466666666542 69999999999999999876665 899999999888876 3678999999999
Q ss_pred cEEEEeecc-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCC-CCEE
Q 023018 182 AYLNMFSGH-------GSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD-STLA 251 (288)
Q Consensus 182 ~~~~~~~~~-------~~~i~~~~~~p~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 251 (288)
+.+..+... ......+.++|+|++|+++.. ++.|.++|+.+++.+..+.... . ....|+ ...+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-----~--~~~~p~g~~~~ 232 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-----C--YHIFPASPTVF 232 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-----E--EEEEEEETTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-----c--eeeccCCCcEE
Confidence 988877532 234567899999999999874 5789999999999888877421 1 122232 2344
Q ss_pred EEEeCCCcEEEEEcCCCcEE
Q 023018 252 LSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 252 ~~~~~dg~i~iwd~~t~~~~ 271 (288)
++.+.||.+.+.++.+++..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~ 252 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETK 252 (426)
T ss_dssp EEEETTSSEEEEECCTTCCE
T ss_pred EEEcCCCCEEEEECCCCcEE
Confidence 44555666665555444443
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.02 E-value=3.6e-06 Score=67.78 Aligned_cols=209 Identities=14% Similarity=0.086 Sum_probs=132.5
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCC--CeEEEEeCCCCcee
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD--GLVQIWDPSSGNLK 142 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~ 142 (288)
.....++|.+ ++.++++-...+.|..|+.... ....+. .......+++.++++++++.... ..|..++..+++..
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 4578999999 6677777767899999997653 333332 23567899999999865554332 24777777777654
Q ss_pred EEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCccc-EEEEee---------ccCCCeEEEEEcCCCCEEEEEe-
Q 023018 143 CTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA-YLNMFS---------GHGSSVTCGDFTPDGKTICTGS- 210 (288)
Q Consensus 143 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~---------~~~~~i~~~~~~p~~~~l~~~~- 210 (288)
..... .......++..+.+..+++-...+.|+++|...++ .+.... ..-.....+ +|++++|+++.
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 43322 12234555655555555555568999999987542 121110 111234555 78888776655
Q ss_pred CCCeEEEEeCCC-Cce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE--e----cceEEEE
Q 023018 211 DDATLRVWNPKS-GEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCL--N----FQYTCVA 281 (288)
Q Consensus 211 ~dg~i~i~d~~~-~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~--~----~~~~~~~ 281 (288)
..+.|..|++.. +.. ...+.. ......++++++|+++++....+.|.+++.. |+.... + ....+++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 567899999864 321 122221 1235568999999887777778899999975 766432 2 4477888
Q ss_pred Ee
Q 023018 282 YD 283 (288)
Q Consensus 282 ~~ 283 (288)
|.
T Consensus 262 ~~ 263 (306)
T 2p4o_A 262 FG 263 (306)
T ss_dssp EC
T ss_pred Ee
Confidence 86
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.01 E-value=1.2e-07 Score=83.32 Aligned_cols=186 Identities=12% Similarity=0.101 Sum_probs=124.7
Q ss_pred CCCeEEEEEccCCeeeEeeccccCc-------------------------------------E-EEEEEecCCCEEEEEe
Q 023018 85 GDDKGFFWRINQGDWASEIQGHKDS-------------------------------------V-SSLAFSMDGQLLASGG 126 (288)
Q Consensus 85 ~dg~i~iw~~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~~~~~~~l~~~~ 126 (288)
.+|.|+.+|..+++.+-.+...... + ..+++.+...+++.+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3799999999999887765422110 0 1345667777777776
Q ss_pred CC----------------CeEEEEeCCCCceeEEeccCCC---------CEEEEEEc-CCC---CEEEEecCCCeEEEEE
Q 023018 127 LD----------------GLVQIWDPSSGNLKCTLEGPGG---------GVEWVSWH-PRG---HIVLAGSEDSTVWMWN 177 (288)
Q Consensus 127 ~d----------------g~i~i~d~~~~~~~~~~~~~~~---------~i~~~~~~-~~~---~~l~~~~~dg~i~i~d 177 (288)
.+ +.|..+|..+++.+..++.... ...-+... .+| ..++.++.+|.++++|
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD 339 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLD 339 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEE
Confidence 55 3899999999998887764321 11112332 456 4677789999999999
Q ss_pred CCcccEEEEeeccC-------------CCe--------------------------EEEEEcCCCCEEEEEe--------
Q 023018 178 ADRAAYLNMFSGHG-------------SSV--------------------------TCGDFTPDGKTICTGS-------- 210 (288)
Q Consensus 178 ~~~~~~~~~~~~~~-------------~~i--------------------------~~~~~~p~~~~l~~~~-------- 210 (288)
.++++.+....... .++ ..++++|+..++++..
T Consensus 340 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~ 419 (599)
T 1w6s_A 340 RTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWE 419 (599)
T ss_dssp TTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEE
T ss_pred CCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeee
Confidence 99998876654211 111 2356777666655431
Q ss_pred -------------------------------CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCc
Q 023018 211 -------------------------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (288)
Q Consensus 211 -------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 259 (288)
..|.|..||+.+++.+...... .+...-.+...+.+++.++.||.
T Consensus 420 ~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagg~vf~gt~dg~ 495 (599)
T 1w6s_A 420 PFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER----FAVWGGTMATAGDLVFYGTLDGY 495 (599)
T ss_dssp ECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES----SCCCSBCEEETTTEEEEECTTSE
T ss_pred cccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC----CCccCcceEecCCEEEEECCCCe
Confidence 3478999999999887776521 11111112234667888999999
Q ss_pred EEEEEcCCCcEEEEe
Q 023018 260 VHMVNITTGKVCCLN 274 (288)
Q Consensus 260 i~iwd~~t~~~~~~~ 274 (288)
++.||.+||+++..+
T Consensus 496 l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 496 LKARDSDTGDLLWKF 510 (599)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEEEe
Confidence 999999999999876
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.98 E-value=1.8e-07 Score=82.25 Aligned_cols=141 Identities=18% Similarity=0.200 Sum_probs=96.0
Q ss_pred CeEEEEeCCCCceeEEecc--CC--------CCEEEEEEc-CCCC---EEEEecCCCeEEEEECCcccEEEEeeccC---
Q 023018 129 GLVQIWDPSSGNLKCTLEG--PG--------GGVEWVSWH-PRGH---IVLAGSEDSTVWMWNADRAAYLNMFSGHG--- 191 (288)
Q Consensus 129 g~i~i~d~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--- 191 (288)
+.|..+|..+++.+..++. |. .++. +... .+|+ .++.++.+|.++++|.++++.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999888753 21 1222 2222 4563 78889999999999999998886654321
Q ss_pred ----------CCe--------------------------------EEEEEcCCCCEEEEEe-------------------
Q 023018 192 ----------SSV--------------------------------TCGDFTPDGKTICTGS------------------- 210 (288)
Q Consensus 192 ----------~~i--------------------------------~~~~~~p~~~~l~~~~------------------- 210 (288)
.++ ..++++|+...+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 1345666555555432
Q ss_pred --------------CCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 211 --------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 211 --------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+|.|..||+.+++.+...... .++..-.....+.+++.++.||.++.||.+||+++..+
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH----LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES----SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCC----CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 2578999999999987776532 12211112224667888999999999999999999877
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.92 E-value=1.5e-06 Score=70.51 Aligned_cols=197 Identities=13% Similarity=0.054 Sum_probs=122.1
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc-----ccCcEEEEEEec-CCCEEEEEeC------------
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-----HKDSVSSLAFSM-DGQLLASGGL------------ 127 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~i~~~~~~~-~~~~l~~~~~------------ 127 (288)
.+.++++.+.++.+++ +...+.|..++..++.. ..+.. .......+++.+ +|+++++-..
T Consensus 81 ~p~gi~~~~~~g~l~v-~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYI-VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTEEEE-EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCcEEE-EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 4788999873454444 44445588888765432 22211 113468899999 8876665432
Q ss_pred -----CCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEe-cCCCeEEEEECCccc--EEEEeeccCCCeEEEEE
Q 023018 128 -----DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDF 199 (288)
Q Consensus 128 -----dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~ 199 (288)
.|.|..||..+++....... ......++++|+++.|+++ +..+.|.+|++.... ....+....+ ...+++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~ 236 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR 236 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence 36788899877654333222 2235679999999866555 566899999987421 1122211223 788999
Q ss_pred cCCCCEEEEEeC----------CCeEEEEeCCCCceeEEEcCCCcc-ccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 200 TPDGKTICTGSD----------DATLRVWNPKSGENIHVIRGHPYH-TEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 200 ~p~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
.++|++.++... .+.|..+|.. ++.+..+...... ...+..+++ .++.++++....+.|.++++...
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 999987666544 4678899874 7777666543211 234566666 45666666667788999988643
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=1.4e-07 Score=84.29 Aligned_cols=193 Identities=16% Similarity=0.179 Sum_probs=130.0
Q ss_pred EEEEEeCCCeEEEEEccCCeeeEeeccccCc----------E-EEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEecc
Q 023018 79 LVATGGGDDKGFFWRINQGDWASEIQGHKDS----------V-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (288)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~----------i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 147 (288)
.+++++.++.|+.+|..+++.+-++...... + ..+.+ .+..+++++.++.|..+|..+++.+..+..
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 5566777899999999999988776532110 0 11222 345788888999999999999998887764
Q ss_pred CCC-CEEEEEEcC--CCCEEEEecC------CCeEEEEECCcccEEEEeeccC---------------------------
Q 023018 148 PGG-GVEWVSWHP--RGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHG--------------------------- 191 (288)
Q Consensus 148 ~~~-~i~~~~~~~--~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~--------------------------- 191 (288)
... ....+...| .+..++++.. +|.|+.+|.++++.+..+....
T Consensus 146 ~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~ 225 (668)
T 1kv9_A 146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL 225 (668)
T ss_dssp SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred CCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeee
Confidence 211 000011111 1345555543 5899999999999888775310
Q ss_pred ----CCeEEEEEcCCCCEEEEEeCCC-------------------eEEEEeCCCCceeEEEcCCCccc-------cCeEE
Q 023018 192 ----SSVTCGDFTPDGKTICTGSDDA-------------------TLRVWNPKSGENIHVIRGHPYHT-------EGLTC 241 (288)
Q Consensus 192 ----~~i~~~~~~p~~~~l~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~~~~~-------~~v~~ 241 (288)
.....+++.|....++.++.++ .|..+|+.+|+.+..+.... |. .+...
T Consensus 226 ~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~-~~~wd~~~~~~~~~ 304 (668)
T 1kv9_A 226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP-GDSWDFTATQQITL 304 (668)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCCCCSCEEE
T ss_pred CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC-CccccccCCCCcEE
Confidence 0112467888888998888766 39999999999988776421 11 22333
Q ss_pred EEEcCCCC---EEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 242 LTISADST---LALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 242 ~~~~~~~~---~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
..+..+|+ .|+.++.+|.++++|..||+++...
T Consensus 305 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 305 AELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 33334665 6888999999999999999998543
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.91 E-value=4.9e-06 Score=67.43 Aligned_cols=205 Identities=9% Similarity=-0.051 Sum_probs=132.3
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeee-EeeccccCcEEEEEEecCCCEE-EEEeCCCeEEEEeCCCCceeE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA-SEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~ 143 (288)
.+.+++|.+.++.++.+-...+.|..+++...... ..+...-.....+++.+.+..| ++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 46789999866777777777788999998765321 1222122345678888755544 444567899999987554433
Q ss_pred EeccCCCCEEEEEEcCCCCEEEEec--CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeC
Q 023018 144 TLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNP 220 (288)
Q Consensus 144 ~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~ 220 (288)
.+.........+++.|.+..|+.+. ..+.|..+++............-.....|+++|++..|+.+. ..+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 4434455689999998655555554 357899988864332222222234568999999777777665 4678999998
Q ss_pred CCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.... ...+... .......+++.. +.++++-...+.|..++..+|+....+
T Consensus 196 dG~~-~~~~~~~--~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 196 DGTN-RQAVVKG--SLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TSCS-CEEEECS--CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCc-eEEEecC--CCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 6433 3333221 234456777753 445556666789999999888765544
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.89 E-value=7.5e-06 Score=67.28 Aligned_cols=213 Identities=11% Similarity=-0.038 Sum_probs=132.8
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCceeE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~ 143 (288)
+..+|.+..+ .+.++++.. ..|+..++........+.. ......++|++....|+.+ ...+.|..+++.......
T Consensus 34 d~~~C~~~~~-~~~ll~~~~--~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANR--IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TSSCEEESSS-CCEEEEECB--SCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCccccccc-CceeEeecc--cceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 3445666555 454444332 5588788776554444443 3446889999866655554 467889999988766544
Q ss_pred EeccCCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEeC
Q 023018 144 TLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-D-ATLRVWNP 220 (288)
Q Consensus 144 ~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~-d-g~i~i~d~ 220 (288)
.+.........+++.+. ++++++-...+.|.+.++........+...-.....+++.|.+..|+.+.. . +.|..+++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 44433345678999874 445566666789999998654433333333456789999997666665543 4 78888887
Q ss_pred CCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEEEe----cceEEEEEee
Q 023018 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVCCLN----FQYTCVAYDL 284 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~ 284 (288)
.. .....+... .......++++|++..|+.+ ...+.|..+++........+ ....++++..
T Consensus 190 dG-~~~~~~~~~--~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~ 255 (349)
T 3v64_C 190 DG-SGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFE 255 (349)
T ss_dssp TS-CSCEESCCS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEET
T ss_pred CC-CCcEEEEEC--CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEEC
Confidence 64 333333221 23457899999866655554 45678999998754433322 3345555533
No 264
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.88 E-value=1.3e-05 Score=72.62 Aligned_cols=210 Identities=8% Similarity=-0.001 Sum_probs=133.6
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----eeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCC
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPS 137 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~ 137 (288)
....+.+|+|.+.++.++++-...+.|+.+++... .....+.........|++.+.+..|+.+ ...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 34567789998866667767677788888888652 2223333233445678898877655544 567899999987
Q ss_pred CCceeEEeccCCCCEEEEEEcCCCCEEEEec-CC-CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCe
Q 023018 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-ED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDAT 214 (288)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~ 214 (288)
.......+.........|+++|.+..|+.+. .. +.|...++........+...-.....|++.+.+..|+.+. ..+.
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 6554444444445689999999755555554 33 7899999865444333333345788999998777777765 4568
Q ss_pred EEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|..+++........+.... .......|++.. +.++++-...+.|...+..+|+.+..+
T Consensus 582 I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEK-RLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSCSCEEEEECTT-TTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCceEEEecCCC-ccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 9999986544333333211 223345666643 344455556788999998888665554
No 265
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.88 E-value=5.1e-06 Score=67.22 Aligned_cols=192 Identities=13% Similarity=0.171 Sum_probs=127.9
Q ss_pred CcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecC----CC---EEEEEeC---CCeEEEEeC--CCCceeEE
Q 023018 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMD----GQ---LLASGGL---DGLVQIWDP--SSGNLKCT 144 (288)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---dg~i~i~d~--~~~~~~~~ 144 (288)
..+++.....+-|.+||+ +++.+..+.. +.++.+..-|. ++ ++++... +++|.+|++ .++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666667788999999 7888888763 56677766653 22 2333333 579999966 3333 444
Q ss_pred ecc-------CCCCEEEEEE--cCC-CC-EEEEecCCCeEEEEECC-------cccEEEEeeccCCCeEEEEEcCCCCEE
Q 023018 145 LEG-------PGGGVEWVSW--HPR-GH-IVLAGSEDSTVWMWNAD-------RAAYLNMFSGHGSSVTCGDFTPDGKTI 206 (288)
Q Consensus 145 ~~~-------~~~~i~~~~~--~~~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~~p~~~~l 206 (288)
+.. ....+..+++ +|. +. ++++...+|.+..|++. +.+.++++.. .+.+-.+...+...+|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 421 1145666777 674 44 67778888999999882 3466777764 4578888899988999
Q ss_pred EEEeCCCeEEEEeCC-----CCceeEEEcCCCccccCeEEEEEc--CCCC-EEEEEe-CCCcEEEEEcC-CCcEEEEe
Q 023018 207 CTGSDDATLRVWNPK-----SGENIHVIRGHPYHTEGLTCLTIS--ADST-LALSGS-KDGSVHMVNIT-TGKVCCLN 274 (288)
Q Consensus 207 ~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~-~dg~i~iwd~~-t~~~~~~~ 274 (288)
+.+-.+..|..|+.. +++.+..+.. ......+..|++- ++++ +|++++ .++.+.+||.. +.+.+..+
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~-g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADG-RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSS-SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecC-CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999998888777854 2334444332 1133467888874 4555 666666 56799999996 67776665
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.86 E-value=6.7e-06 Score=68.54 Aligned_cols=211 Identities=11% Similarity=-0.036 Sum_probs=131.0
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCceeEEec
Q 023018 68 YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKCTLE 146 (288)
Q Consensus 68 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~ 146 (288)
+|.+..+ .+.++++ . ...|+..++........+.. ......++|++....|+.+ ...+.|..+++........+.
T Consensus 80 ~C~~~~~-~~~l~~~-~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 80 SCKALGP-EPVLLFA-N-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp CEEECSS-CCEEEEE-C-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred eECCccc-cceeEee-c-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 3445444 4444433 3 25688888876655444443 3456889999866655544 467899999988765544444
Q ss_pred cCCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCC
Q 023018 147 GPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-D-ATLRVWNPKSG 223 (288)
Q Consensus 147 ~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~-d-g~i~i~d~~~~ 223 (288)
........+++.+. +.++++-...+.|.+.++........+...-.....+++.|.+..|+.+.. . +.|..+++...
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 33345677889875 445555566788999988654433333333356789999997777766553 3 67888888643
Q ss_pred ceeEEEcCCCccccCeEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEEEe----cceEEEEEeec
Q 023018 224 ENIHVIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVCCLN----FQYTCVAYDLD 285 (288)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~~~~~~~----~~~~~~~~~~d 285 (288)
. ...+... .......|+++|++..|+.+ ...+.|..+++........+ ....++++..+
T Consensus 236 ~-~~~~~~~--~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~ 299 (386)
T 3v65_B 236 G-RRIIADT--HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFED 299 (386)
T ss_dssp S-CEEEECS--SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETT
T ss_pred C-cEEEEEC--CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECC
Confidence 3 3333221 23457899999866555544 55678999998754433332 33455555433
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.86 E-value=1.8e-05 Score=64.02 Aligned_cols=178 Identities=12% Similarity=0.014 Sum_probs=116.0
Q ss_pred CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCC----CceeEEeccCCCCEEEEEEcCCC
Q 023018 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSS----GNLKCTLEGPGGGVEWVSWHPRG 161 (288)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~~~ 161 (288)
..|+..++.+......+.. ......++|++.+..|+.+ ...+.|..+++.. ......+.........+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 5688889887765555543 3456889999876655554 4568999999876 22223333333456789998744
Q ss_pred -CEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceeEEEcCCCccccC
Q 023018 162 -HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD--ATLRVWNPKSGENIHVIRGHPYHTEG 238 (288)
Q Consensus 162 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~ 238 (288)
+++++-...+.|.++++........+.........+++.|.+..|+.+... +.|..+++. |.....+... ....
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~--~~~~ 165 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE--NIQW 165 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS--SCSC
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC--CCCC
Confidence 455555677899999987544333333334567899999977777666543 688888875 4444444221 2356
Q ss_pred eEEEEEcCCCCEEEEE-eCCCcEEEEEcCCC
Q 023018 239 LTCLTISADSTLALSG-SKDGSVHMVNITTG 268 (288)
Q Consensus 239 v~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~ 268 (288)
...++++|++..|+.+ ...+.|..+++...
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 7899999876666555 45679999999753
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.85 E-value=4.8e-07 Score=82.09 Aligned_cols=192 Identities=12% Similarity=0.074 Sum_probs=113.5
Q ss_pred CEEEEEEc-CCCCcEEE-EEeCCC----eEEEEEccCC-eeeEe-eccccCcEEEEEEecCCCEEEEEeCC-----CeEE
Q 023018 66 EVYSVACS-PTDATLVA-TGGGDD----KGFFWRINQG-DWASE-IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQ 132 (288)
Q Consensus 66 ~v~~~~~~-~~~~~~l~-~~~~dg----~i~iw~~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~ 132 (288)
.+...+|+ | ++++|| +...+| .|+++++.++ +.+.. +. .....++|+|+++.|+....+ ..|+
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 68889999 9 555554 444333 4999999988 63221 21 113467899999987777654 3688
Q ss_pred EEeCCCCce--eEEec-cCCCCEEEEEEcCCCCEEEEecC---CCeEEEEECCcc--cE--EEEeeccCCCeEEEEEcCC
Q 023018 133 IWDPSSGNL--KCTLE-GPGGGVEWVSWHPRGHIVLAGSE---DSTVWMWNADRA--AY--LNMFSGHGSSVTCGDFTPD 202 (288)
Q Consensus 133 i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~--~~~~~~~~~~i~~~~~~p~ 202 (288)
++++.++.. ...+. ........+.|+|+|++|+..+. ...|+++|+.++ .. .............+.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~- 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG- 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-
Confidence 888887642 23333 22334678899999998887653 346889999775 22 222233344556666554
Q ss_pred CCEEE-EEeCC----CeEEEEeCCCC-ceeE-EEcCCCccccCeEEEEEcCCCCEEEEEeCCCc--EEEEEc
Q 023018 203 GKTIC-TGSDD----ATLRVWNPKSG-ENIH-VIRGHPYHTEGLTCLTISADSTLALSGSKDGS--VHMVNI 265 (288)
Q Consensus 203 ~~~l~-~~~~d----g~i~i~d~~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--i~iwd~ 265 (288)
+..|+ ....+ ..|..+++.++ .... .+... ....+..+.+. .+.++++...+|. |+++++
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~--~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS--EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC--SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC--CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 55554 44433 36777887653 2222 23321 11234555554 3345556666774 566665
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.81 E-value=5.2e-06 Score=64.63 Aligned_cols=182 Identities=15% Similarity=0.213 Sum_probs=122.2
Q ss_pred eeccccCcEEEEEEecCCCE-EEEEeCCCeEEEEeCCCCceeEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECC
Q 023018 102 EIQGHKDSVSSLAFSMDGQL-LASGGLDGLVQIWDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (288)
Q Consensus 102 ~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 179 (288)
.+.+-...+..++|+|++.. +++...++.|...|.. ++.+..+.. .....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34455567999999997664 4556778999999988 887777643 22458889999888776776677899999876
Q ss_pred cccE---EEEee------ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCceeEEEcC----CCccccCeEEEE
Q 023018 180 RAAY---LNMFS------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK---SGENIHVIRG----HPYHTEGLTCLT 243 (288)
Q Consensus 180 ~~~~---~~~~~------~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~----~~~~~~~v~~~~ 243 (288)
.... +.... ........++|+|.++.|+++.......+|.+. ....+..+.. .......+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22221 123456899999999888887766555555443 1122222211 011234578999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEe-------------cceEEEEEeec
Q 023018 244 ISA-DSTLALSGSKDGSVHMVNITTGKVCCLN-------------FQYTCVAYDLD 285 (288)
Q Consensus 244 ~~~-~~~~l~~~~~dg~i~iwd~~t~~~~~~~-------------~~~~~~~~~~d 285 (288)
++| .+.+++.......+.++|.. |+++..+ ....+++|.++
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCC
Confidence 999 55677777778889999966 5666654 15678888765
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.79 E-value=2.4e-06 Score=75.08 Aligned_cols=193 Identities=15% Similarity=0.136 Sum_probs=128.3
Q ss_pred EEEEEeC-CCeEEEEEc-cCCeeeEeeccccC-----------cEEEEEEecCCCE----EEEEeCCCeEEEEeCCCCce
Q 023018 79 LVATGGG-DDKGFFWRI-NQGDWASEIQGHKD-----------SVSSLAFSMDGQL----LASGGLDGLVQIWDPSSGNL 141 (288)
Q Consensus 79 ~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~-----------~i~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~~~ 141 (288)
.+++++. ++.|+-+|. .+++.+-++..... ....+++.|.+.. |++++.++.|..+|..+++.
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 4555666 789999999 89988777653211 0123455444444 88888999999999999998
Q ss_pred eEEeccCCC----CEE-EEEEcCCCCEEEEec------CCCeEEEEECCcccEEEEeeccCCC-----------------
Q 023018 142 KCTLEGPGG----GVE-WVSWHPRGHIVLAGS------EDSTVWMWNADRAAYLNMFSGHGSS----------------- 193 (288)
Q Consensus 142 ~~~~~~~~~----~i~-~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~----------------- 193 (288)
+........ .+. ..... ++ .+++++ .+|.|+.+|.++++.+..+......
T Consensus 144 ~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 144 VWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp EEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 877653220 111 11111 33 555555 3799999999999988776532211
Q ss_pred --------------------e-EEEEEcCCCCEEEEEeCC----------------CeEEEEeCCCCceeEEEcCCCc--
Q 023018 194 --------------------V-TCGDFTPDGKTICTGSDD----------------ATLRVWNPKSGENIHVIRGHPY-- 234 (288)
Q Consensus 194 --------------------i-~~~~~~p~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~~-- 234 (288)
+ ..+++.+....++.++.+ +.|..+|..+|+.+..+.....
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~ 301 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE 301 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc
Confidence 0 134566777788887765 3799999999999887765321
Q ss_pred -----cccCeEEEEEc-CCC---CEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 235 -----HTEGLTCLTIS-ADS---TLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 235 -----~~~~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
...++. +... .+| ..++.++.+|.++++|..||+++...
T Consensus 302 wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 302 WDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 111221 2222 467 56778899999999999999998765
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.77 E-value=4.9e-05 Score=63.63 Aligned_cols=180 Identities=11% Similarity=0.006 Sum_probs=120.7
Q ss_pred CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCC----ceeEEeccCCCCEEEEEEcC-C
Q 023018 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSG----NLKCTLEGPGGGVEWVSWHP-R 160 (288)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~-~ 160 (288)
..|+..++........+. ....+..++|++....|+.+ ...+.|+.+++... .....+.........+++.+ .
T Consensus 92 ~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~ 170 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 170 (400)
T ss_dssp TEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTT
T ss_pred ceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecC
Confidence 678888888765554444 34567899999876666555 45688999988752 23333443445688999998 4
Q ss_pred CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeEEEcCCCccccC
Q 023018 161 GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEG 238 (288)
Q Consensus 161 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~ 238 (288)
++++++-...+.|.+.++........+...-.....|++.|.+.+|+.+.. .+.|...++........+.. ....
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~---~l~~ 247 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQW 247 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS---SCSC
T ss_pred CceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC---CCCc
Confidence 555666667789999998765544444434456789999997777766653 36899998864333333322 2356
Q ss_pred eEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcE
Q 023018 239 LTCLTISADSTLALSG-SKDGSVHMVNITTGKV 270 (288)
Q Consensus 239 v~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~~~ 270 (288)
...|++++++..|+.+ ...+.|..+++.....
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 7899999877666655 4467899999875543
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.75 E-value=3.6e-06 Score=73.83 Aligned_cols=150 Identities=17% Similarity=0.240 Sum_probs=99.6
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeecccc----CcEEE-EEEecCCCEEEEEeC------CCeEEEEeCCCCceeEEec
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGHK----DSVSS-LAFSMDGQLLASGGL------DGLVQIWDPSSGNLKCTLE 146 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----~~i~~-~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~ 146 (288)
..+++++.++.|..+|..+++.+..+.... ..+.+ .... + ..+++++. +|.|..+|..+++.+..+.
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 356677889999999999998877654211 01111 1111 3 35666654 7999999999999887765
Q ss_pred cCCCC--------------------------------------EEEEEEcCCCCEEEEecCC----------------Ce
Q 023018 147 GPGGG--------------------------------------VEWVSWHPRGHIVLAGSED----------------ST 172 (288)
Q Consensus 147 ~~~~~--------------------------------------i~~~~~~~~~~~l~~~~~d----------------g~ 172 (288)
..... ...+++.+....++.++.+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32110 0135667766677666542 36
Q ss_pred EEEEECCcccEEEEeecc----------CCCeEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceeEEEc
Q 023018 173 VWMWNADRAAYLNMFSGH----------GSSVTCGDFTPDGK---TICTGSDDATLRVWNPKSGENIHVIR 230 (288)
Q Consensus 173 i~i~d~~~~~~~~~~~~~----------~~~i~~~~~~p~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~ 230 (288)
|..+|.++++.+..++.. ..++. +...++|+ .++.++.+|.++++|..+|+.+..+.
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 999999999988877632 12222 22234664 57788899999999999999877664
No 273
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.75 E-value=3.1e-05 Score=70.78 Aligned_cols=199 Identities=12% Similarity=0.085 Sum_probs=132.2
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc--------ccCcEEEEEEecCCCEEEEEeCCCeEEEEe
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG--------HKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (288)
...|.++...+ ++.+ ..|+.++-|..|+..+++....... ....|.++...+++..|.+|+.++-|.+|+
T Consensus 356 ~~~V~~i~~d~-~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDK-DKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECT-TSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECC-CCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 35699999887 5544 4577777799999877654332211 235789999888887566777777799999
Q ss_pred CCCCceeEEec----cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee------ccCCCeEEEEEcCCCCE
Q 023018 136 PSSGNLKCTLE----GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS------GHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 136 ~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~i~~~~~~p~~~~ 205 (288)
..+++...... .+...|.++...+++.+.+.. . +-+.+|+..+++...... .....|.++...++|..
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 88776443321 134579999998888755544 4 458899987765433221 12357899999888875
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcC----CCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 206 ICTGSDDATLRVWNPKSGENIHVIRG----HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
.+ |+. +.|..||..++.. .+.. .......|.++...++|.+.++. .. -|..||..+++...
T Consensus 512 Wi-gt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~~ 576 (795)
T 4a2l_A 512 WI-GGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQIKR 576 (795)
T ss_dssp EE-EES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEE
T ss_pred EE-EeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCcEEE
Confidence 55 444 5588899876654 3321 11234578999999988866544 34 58889988775443
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=9.4e-06 Score=68.64 Aligned_cols=202 Identities=9% Similarity=0.116 Sum_probs=120.6
Q ss_pred CEEEEEEcC-CCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeC-CC----eEEEEeCCCC
Q 023018 66 EVYSVACSP-TDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL-DG----LVQIWDPSSG 139 (288)
Q Consensus 66 ~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~ 139 (288)
....|+++| .++.++++ ...+.|+.+++..+....... .......++|++++++|+++.. .+ .+.+++. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~-d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLV-GEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEE-EBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEE-eCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 357889997 24554444 433889999988766544443 4455789999999996666653 22 3333443 23
Q ss_pred cee--EEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEeec-cCCCeEEEEEcCCCCEEEEEe-CCCe
Q 023018 140 NLK--CTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSG-HGSSVTCGDFTPDGKTICTGS-DDAT 214 (288)
Q Consensus 140 ~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~~~-~dg~ 214 (288)
... ..+.. ......++++| ++.++++-..++.|+.++...+........ .......++|+|++++|+.+. ..+.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 221 22222 23456788999 777777777789999999976654222222 224578899999999665554 5678
Q ss_pred EEEEeCCC--Cce--eEEEcCC---Cc---------cccCeE-EEEEc--------CCCCEEEEEeCCCcEEEEEcCCCc
Q 023018 215 LRVWNPKS--GEN--IHVIRGH---PY---------HTEGLT-CLTIS--------ADSTLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 215 i~i~d~~~--~~~--~~~~~~~---~~---------~~~~v~-~~~~~--------~~~~~l~~~~~dg~i~iwd~~t~~ 269 (288)
|..++... +.. +..+.+. .. .-.... .++.. +++.++++-...+.|+.++ .+|+
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 98877542 221 2222221 00 011233 45553 3466666656677888888 4565
Q ss_pred EEE
Q 023018 270 VCC 272 (288)
Q Consensus 270 ~~~ 272 (288)
...
T Consensus 373 v~~ 375 (430)
T 3tc9_A 373 VTT 375 (430)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.70 E-value=3.4e-05 Score=61.88 Aligned_cols=207 Identities=11% Similarity=0.043 Sum_probs=130.2
Q ss_pred eecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEe-ecc----c--cCcEEEEEE---ecCCCEEEEEe---
Q 023018 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQG----H--KDSVSSLAF---SMDGQLLASGG--- 126 (288)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~----~--~~~i~~~~~---~~~~~~l~~~~--- 126 (288)
+....----+++|++.++.++++.-..|+|..|+...+..... +.. . ...+..|.| .|+++++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 3344444557899885666665555789999999876543333 321 1 113578999 68877766543
Q ss_pred ----------CCCeEEEEeCC---CCceeEEecc-------------CCCCEEEEEEcCCCCEEEEecCC-CeEEEEECC
Q 023018 127 ----------LDGLVQIWDPS---SGNLKCTLEG-------------PGGGVEWVSWHPRGHIVLAGSED-STVWMWNAD 179 (288)
Q Consensus 127 ----------~dg~i~i~d~~---~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~d-g~i~i~d~~ 179 (288)
.+..|..||+. +++.+....- .......++..++|+..++++.. +.|..++..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 25789999999 7776655431 12358899999999999999988 888888875
Q ss_pred cccEEEEee------ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eEEEc-CCCccccCeEEE-EEcCCCC
Q 023018 180 RAAYLNMFS------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN--IHVIR-GHPYHTEGLTCL-TISADST 249 (288)
Q Consensus 180 ~~~~~~~~~------~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~-~~~~~~~~v~~~-~~~~~~~ 249 (288)
.. .+..+. ......+.|+++|++..|++....|.|..+|+.+... +..-. +..........+ ....+|+
T Consensus 168 G~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 168 GK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp SC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred CC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCE
Confidence 43 232221 1122367999999999998887799999999884322 11110 111111223443 3334677
Q ss_pred E-EEEEeCCCcEEEEEcCC
Q 023018 250 L-ALSGSKDGSVHMVNITT 267 (288)
Q Consensus 250 ~-l~~~~~dg~i~iwd~~t 267 (288)
. |++.+..+.+.+.+...
T Consensus 247 vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 247 SVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEEETTEEEEEECSST
T ss_pred EEEEEcCCCCEEEEECCCC
Confidence 7 44555566666655443
No 276
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.70 E-value=4.4e-05 Score=69.77 Aligned_cols=196 Identities=12% Similarity=0.081 Sum_probs=128.4
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec----cccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCC
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ----GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 139 (288)
...|.++...+ ++.+|..|+.++-|.+|+..+++...... .....|.++...+++.+.+. +..| |.+|+..++
T Consensus 405 ~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~~~~~~~ 481 (795)
T 4a2l_A 405 SNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TLSA-LVRFNPEQR 481 (795)
T ss_dssp CSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ESSC-EEEEETTTT
T ss_pred CccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ecCc-eeEEeCCCC
Confidence 35689998877 56645567776779999988766433221 13457899998888875544 4444 888998776
Q ss_pred ceeEEecc------CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee-------ccCCCeEEEEEcCCCCEE
Q 023018 140 NLKCTLEG------PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-------GHGSSVTCGDFTPDGKTI 206 (288)
Q Consensus 140 ~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~p~~~~l 206 (288)
+....... ....|.++...+++.+.+... +-+..|+..+++. .+. .....|.++...++|.+.
T Consensus 482 ~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lW 557 (795)
T 4a2l_A 482 SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIW 557 (795)
T ss_dssp EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEE
T ss_pred eEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEE
Confidence 54332211 235689999998887655544 5688888876654 222 134578999988888755
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEcCCC-ccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 207 CTGSDDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 207 ~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
+. +.. .|..||..+++. ..+.... .....|.++...++|.+.+++ . +-|..|+..+++..
T Consensus 558 ig-T~~-Gl~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~~~ 618 (795)
T 4a2l_A 558 VG-TRE-GFYCFNEKDKQI-KRYNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNPETEKFR 618 (795)
T ss_dssp EE-ESS-CEEEEETTTTEE-EEECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTTEEE
T ss_pred EE-eCC-CceeECCCCCcE-EEeCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEEcCCCCcEE
Confidence 54 444 588899876543 3333211 123468888888888776654 3 45788888876544
No 277
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.70 E-value=1.8e-07 Score=84.06 Aligned_cols=207 Identities=9% Similarity=0.003 Sum_probs=123.3
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccC----CeeeEeeccccCcEEEEEEecCCCEE-EEEeCCCeEEEEeCCCCc
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGN 140 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~ 140 (288)
.+.+++|.+.++.++++-...+.|+.+++.. ......+.........|++.+.+..| ++-...+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 4567888885555555555668898888875 22222222111223567777544444 444556889999987655
Q ss_pred eeEEeccCCCCEEEEEEcCCCCEEEEecC-C-CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEE
Q 023018 141 LKCTLEGPGGGVEWVSWHPRGHIVLAGSE-D-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRV 217 (288)
Q Consensus 141 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i 217 (288)
....+.........|+++|.+.+|+.+.. . +.|..+++........+...-.....|+|+|++..|+.+. ..+.|.+
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 44444333345678899986555555443 2 6888887754322222222234567899999766665554 5678999
Q ss_pred EeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 218 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+++... ....+............|++..+ .++++....+.|..++..+|+.+..+
T Consensus 567 ~d~dG~-~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 567 IDVNGG-NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp ECSSSS-CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EccCCC-ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 998643 33344321111223345566543 45555556789999999999888766
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.68 E-value=4.8e-05 Score=61.58 Aligned_cols=179 Identities=9% Similarity=-0.006 Sum_probs=114.2
Q ss_pred CeEEEEEccCCe--eeEeeccccCcEEEEEEecCCCEEE-EEeCCCeEEEEeCCCCce-eEEeccCCCCEEEEEEcC-CC
Q 023018 87 DKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNL-KCTLEGPGGGVEWVSWHP-RG 161 (288)
Q Consensus 87 g~i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~-~~ 161 (288)
..|+..++.... ....+.. ......+.|.+....|+ +-...+.|..+++..... ...+...-.....+++.+ .+
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred CeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 678888887653 2222222 23456899998655554 445678899999876632 222222334567789987 45
Q ss_pred CEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeEEEcCCCccccCe
Q 023018 162 HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEGL 239 (288)
Q Consensus 162 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v 239 (288)
.++++-...+.|.++++........+.........+++.|.+.+|+.+.. .+.|..+++.. .....+... .....
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~--~l~~P 168 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINS--EIYWP 168 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECS--SCSCE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEEC--CCCCc
Confidence 55556566789999998654332223234456789999997777776653 57888888763 333333221 23456
Q ss_pred EEEEEcCCCCEEEEE-eCCCcEEEEEcCCCc
Q 023018 240 TCLTISADSTLALSG-SKDGSVHMVNITTGK 269 (288)
Q Consensus 240 ~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~~ 269 (288)
..++++|++..|+.+ +..+.|..+++....
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 899999966655554 456889999987543
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.66 E-value=7.3e-05 Score=67.85 Aligned_cols=183 Identities=11% Similarity=0.005 Sum_probs=118.1
Q ss_pred CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEE-EEeCCCeEEEEeCCCC----ceeEEeccCCCCEEEEEEcCCC
Q 023018 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSG----NLKCTLEGPGGGVEWVSWHPRG 161 (288)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~ 161 (288)
..|+..++........+. ....+..|+|.+....|+ +-...+.|+.+++... .....+.........|++.+.+
T Consensus 404 ~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp SSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred cceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence 567777877655544444 345667899998655554 4445688998888753 2333344344557789998866
Q ss_pred C-EEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceeEEEcCCCccccC
Q 023018 162 H-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-D-ATLRVWNPKSGENIHVIRGHPYHTEG 238 (288)
Q Consensus 162 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~ 238 (288)
+ ++++-...+.|.+.++........+.........|++.|...+|+.+.. . +.|.+.++... ....+... ....
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~--~l~~ 559 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTE--NIQW 559 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECS--SCSC
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeC--CCCC
Confidence 4 5555566789999999765443334334456899999998777776653 2 67999998644 33333321 3356
Q ss_pred eEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCcEEEE
Q 023018 239 LTCLTISADSTLALSG-SKDGSVHMVNITTGKVCCL 273 (288)
Q Consensus 239 v~~~~~~~~~~~l~~~-~~dg~i~iwd~~t~~~~~~ 273 (288)
...|++++.+..|+.+ ...+.|..+++........
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 8899999866666655 4457899999876544433
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.64 E-value=1.9e-05 Score=66.76 Aligned_cols=202 Identities=12% Similarity=0.125 Sum_probs=122.9
Q ss_pred CEEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCC-----eEEEEeCCC
Q 023018 66 EVYSVACSPT--DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDG-----LVQIWDPSS 138 (288)
Q Consensus 66 ~v~~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 138 (288)
....++|.|. ++.++++-.. +.|+.++..++....... .......++|+++++ |+++...+ .+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 3568999983 3555544333 889999988777655443 444578999999999 44444321 233333222
Q ss_pred Cce-eEEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECCcccEEEEe-ec-cCCCeEEEEEcCCCCEEEEEe-CCC
Q 023018 139 GNL-KCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF-SG-HGSSVTCGDFTPDGKTICTGS-DDA 213 (288)
Q Consensus 139 ~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~~~i~~~~~~p~~~~l~~~~-~dg 213 (288)
+.. ...+. .......++++| ++.++++-..++.|+.++..++.....+ .. .......++|+|++++|+.+. ..+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 211 11222 223456789999 6777667667889999999877652222 21 122235699999999666655 467
Q ss_pred eEEEEeCC--CCce--eEEEcCC---C---------ccccCeEEEEE---------cCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 214 TLRVWNPK--SGEN--IHVIRGH---P---------YHTEGLTCLTI---------SADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 214 ~i~i~d~~--~~~~--~~~~~~~---~---------~~~~~v~~~~~---------~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
.|+.++.. ++.. ...+.+. . ..-.....+++ .+++.++++-...+.|+.++. +|
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 89997754 2321 1222221 0 01234677899 677777777777789999984 56
Q ss_pred cEEE
Q 023018 269 KVCC 272 (288)
Q Consensus 269 ~~~~ 272 (288)
+...
T Consensus 375 ~v~t 378 (433)
T 4hw6_A 375 RVTT 378 (433)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 5443
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.62 E-value=2.1e-05 Score=69.11 Aligned_cols=195 Identities=16% Similarity=0.167 Sum_probs=124.3
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeEeeccccCc---------EEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEec
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDS---------VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 146 (288)
++.+ ++++.++.|+.+|..+++.+-++...... ...+++ .+..+++++.++.|..+|..+++.+..+.
T Consensus 68 ~g~v-yv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVI-YVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEE-EEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCEE-EEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 4444 44555345999999999887776533211 011222 34578888899999999999999887765
Q ss_pred cCCC----CEE-E-EEEcC--CCC-EEEEec------CCCeEEEEECCcccEEEEeeccCCCe-----------------
Q 023018 147 GPGG----GVE-W-VSWHP--RGH-IVLAGS------EDSTVWMWNADRAAYLNMFSGHGSSV----------------- 194 (288)
Q Consensus 147 ~~~~----~i~-~-~~~~~--~~~-~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~i----------------- 194 (288)
.... .+. . +.... +++ .+++++ .+|.|+.+|..+++.+.........+
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 3320 011 1 11111 233 566655 37899999999998877654211000
Q ss_pred ------------------------EEEEEcCCCCEEEEEeC--------------------C----CeEEEEeCCCCcee
Q 023018 195 ------------------------TCGDFTPDGKTICTGSD--------------------D----ATLRVWNPKSGENI 226 (288)
Q Consensus 195 ------------------------~~~~~~p~~~~l~~~~~--------------------d----g~i~i~d~~~~~~~ 226 (288)
..+++.|....++.+.. | +.|..+|..+|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 13456677778877763 2 58999999999998
Q ss_pred EEEcCCCc-------cccCeEEEEEc-CCC---CEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 227 HVIRGHPY-------HTEGLTCLTIS-ADS---TLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 227 ~~~~~~~~-------~~~~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
..+..... ...++. +... .+| ..|+.++.+|.++++|..+|+++...
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 87754210 112221 2222 466 37888999999999999999998765
No 282
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.60 E-value=0.00018 Score=63.69 Aligned_cols=204 Identities=10% Similarity=-0.051 Sum_probs=134.9
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCceeE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~ 143 (288)
..+.+++|++.++.++++-..++.|..+++........+.........+++.+.+..|+.+ ...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 4578999999777777777778999999887654433333222345678888766655444 456889999987554333
Q ss_pred EeccCCCCEEEEEEcCCCCEEEEec--CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeC
Q 023018 144 TLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNP 220 (288)
Q Consensus 144 ~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~ 220 (288)
.+...-.....|++.|....|+.+. ..+.|...++...... .+...-.....|++++++..|+.+. ..+.|..+|+
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 3334445689999999555555544 2578888887654332 2223445678999999878777765 4668999998
Q ss_pred CCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
..... ..+.. .......+++.. +.++++-...+.|...|..+|+....+
T Consensus 196 dG~~~-~v~~~---~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 196 LGLNR-EVIAD---DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp TSCSC-EEEEE---CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCce-EEeec---cCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 75443 33332 223456777765 445555555789999998888655544
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=4.4e-05 Score=69.63 Aligned_cols=199 Identities=12% Similarity=0.068 Sum_probs=126.6
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee---ccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCce
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI---QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (288)
..|.++...+ ++.+ ..|+.++-|..|+..++...... ......|.++...+++.+ .+|+.++-|..++..+++.
T Consensus 363 ~~v~~i~~d~-~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 363 KVVSSVCDDG-QGKL-WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SCEEEEEECT-TSCE-EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEE
T ss_pred cceEEEEEcC-CCCE-EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcE
Confidence 5688998877 4444 45665566888887654332211 113457889888877764 4466666788999877654
Q ss_pred eEEec--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeecc-----CCCeEEEEEcCCCCEEEEEeCCCe
Q 023018 142 KCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH-----GSSVTCGDFTPDGKTICTGSDDAT 214 (288)
Q Consensus 142 ~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~~p~~~~l~~~~~dg~ 214 (288)
..... .....|.++...+++.+ ..|+. +-|..|+..+++........ ...|.++...++|.+. .|+..+.
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~G 516 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGG 516 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSC
T ss_pred EEeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCC
Confidence 33221 13457999998887764 44555 56899998776543322211 3578999988887654 4555445
Q ss_pred EEEEeCCCCceeEEEcCC-CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 215 LRVWNPKSGENIHVIRGH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 215 i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
|..||..+++ ...+... ......|.++...++|.+.++ +..|.|..||..+++..
T Consensus 517 l~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 517 VGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFDYQ 572 (781)
T ss_dssp EEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCCCE
T ss_pred EEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCcEE
Confidence 8889987654 3334321 123456889998888876554 44665588888877643
No 284
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.56 E-value=2.6e-05 Score=62.54 Aligned_cols=157 Identities=8% Similarity=0.105 Sum_probs=109.6
Q ss_pred EEEEEecCCCEEEEEe-CCCeEEEEeCCCCceeEE-eccC------CCCEEEEEE---cCCCCEEEEec-----------
Q 023018 111 SSLAFSMDGQLLASGG-LDGLVQIWDPSSGNLKCT-LEGP------GGGVEWVSW---HPRGHIVLAGS----------- 168 (288)
Q Consensus 111 ~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~-~~~~------~~~i~~~~~---~~~~~~l~~~~----------- 168 (288)
.++.|++....|..++ ..|+|..|+...+..... +... ...+..|.| .|.++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4678988666666665 789999999876644333 2211 113689999 68877777543
Q ss_pred --CCCeEEEEECC---cccEEEEeec-------------cCCCeEEEEEcCCCCEEEEEeCC-CeEEEEeCCCCceeEEE
Q 023018 169 --EDSTVWMWNAD---RAAYLNMFSG-------------HGSSVTCGDFTPDGKTICTGSDD-ATLRVWNPKSGENIHVI 229 (288)
Q Consensus 169 --~dg~i~i~d~~---~~~~~~~~~~-------------~~~~i~~~~~~p~~~~l~~~~~d-g~i~i~d~~~~~~~~~~ 229 (288)
.+..+..||+. +++.+..... .......++..++|+..++++.. +.|..++... +.+..+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEEeee
Confidence 25789999998 7766554431 11247899999999999999988 8888888763 333332
Q ss_pred c-CC--CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 023018 230 R-GH--PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (288)
Q Consensus 230 ~-~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~ 268 (288)
. .. .......+.++++|++..|++....|.+..+|+.+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1 11 112334678999999999998877999999998754
No 285
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.55 E-value=7.6e-05 Score=66.06 Aligned_cols=207 Identities=10% Similarity=-0.038 Sum_probs=127.6
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCee-eEeeccccCcEEEEEEecCCCEEEEE-eCCCeEEEEeCCCCce
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLASG-GLDGLVQIWDPSSGNL 141 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~ 141 (288)
-....+++|++.++.++++-...+.|..+++..... ...+...-.....+++.+.+..|+.+ ...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345789999986666666666678898888876532 22333222467889999866655544 5678999999876544
Q ss_pred eEEeccCCCCEEEEEEcCCCCEEEEecC--CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEE
Q 023018 142 KCTLEGPGGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVW 218 (288)
Q Consensus 142 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~ 218 (288)
...+...-.....|++.|.+..|+.+.. .+.|...++............-.....|++++++..|+.+. ..+.|..+
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 3344344456788999997555555443 46787777754332222322345678999999777777665 45679999
Q ss_pred eCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 219 NPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|+........+... ......+++..+ .++++-...+.|...|..+|+....+
T Consensus 199 ~~dG~~~~~~~~~~---~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 199 NLDGTNRQAVVKGS---LPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp SSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred cCCCCccEEEEeCC---CCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 98654333222211 122345677655 44444455788999999888766554
No 286
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=9.7e-06 Score=68.56 Aligned_cols=152 Identities=8% Similarity=0.114 Sum_probs=98.6
Q ss_pred EEEEEEec-CCCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecC-CC----eEEEEECCcccE
Q 023018 110 VSSLAFSM-DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-DS----TVWMWNADRAAY 183 (288)
Q Consensus 110 i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~ 183 (288)
...|+++| ++..|+++...+.|+.+|+..+....... .......++|+++++.|+++.. ++ .+.+++. .+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 36789997 45566666555889999988766544443 4556899999999996666554 22 3444443 3322
Q ss_pred E--EEeeccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEE-EEeCCCc
Q 023018 184 L--NMFSGHGSSVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGS 259 (288)
Q Consensus 184 ~--~~~~~~~~~i~~~~~~p-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~ 259 (288)
. ..+. .......++++| ++.++++-...+.|+.|+..++......... .......++|+|++++|+ +-...+.
T Consensus 217 ~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 217 KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEEEcCCCCEEEEEECCCCE
Confidence 1 2222 123457788999 6666666667789999999866542222221 224567899999999554 4456788
Q ss_pred EEEEEcC
Q 023018 260 VHMVNIT 266 (288)
Q Consensus 260 i~iwd~~ 266 (288)
|+.++..
T Consensus 294 I~~~~~d 300 (430)
T 3tc9_A 294 ILRSDYD 300 (430)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 9998865
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.54 E-value=0.00019 Score=58.32 Aligned_cols=193 Identities=8% Similarity=0.107 Sum_probs=109.7
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC-eeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQG-DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (288)
..+..+.+.+ ++.+++++ .+|.|.. ....+ ............+..+.+.+++.+++++...+..+-.|- .+..-.
T Consensus 122 ~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~ 197 (327)
T 2xbg_A 122 GSPRLIKALG-NGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWE 197 (327)
T ss_dssp SCEEEEEEEE-TTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCE
T ss_pred CCeEEEEEEC-CCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCcee
Confidence 3466777765 45565555 4554422 11222 222333345567899999998887777654443444442 122211
Q ss_pred Ee-ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeec----cCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 023018 144 TL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG----HGSSVTCGDFTPDGKTICTGSDDATLRVW 218 (288)
Q Consensus 144 ~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~p~~~~l~~~~~dg~i~i~ 218 (288)
.+ ......+..+.+.+++..+++ +.+|.+++.+...++.-..+.. ....+..+.+.+++..++++. +|.| .+
T Consensus 198 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~ 274 (327)
T 2xbg_A 198 PHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LC 274 (327)
T ss_dssp EEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EE
T ss_pred ECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EE
Confidence 11 234456889999998876654 4568887764333332222221 223588999998777666554 6766 34
Q ss_pred eCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 023018 219 NPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (288)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 265 (288)
....|+....+.........+..+.|.+++. +++++.+|.|.-++-
T Consensus 275 S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 275 SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp ESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred eCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 4455655555542211234577888876554 566678887776653
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.53 E-value=7.3e-06 Score=73.25 Aligned_cols=114 Identities=14% Similarity=0.163 Sum_probs=72.6
Q ss_pred EEEEcCCCCcEEEEEeCCC-----------eEEEEEccCCeeeE--eecc-ccCcEEEEEEecCCCEEEEEe-CCCeEEE
Q 023018 69 SVACSPTDATLVATGGGDD-----------KGFFWRINQGDWAS--EIQG-HKDSVSSLAFSMDGQLLASGG-LDGLVQI 133 (288)
Q Consensus 69 ~~~~~~~~~~~l~~~~~dg-----------~i~iw~~~~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~~~-~dg~i~i 133 (288)
++++.+.++++++.|+.+. .+.+||..+++... .+.. +.....++++..+++++++|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 4555554667777776543 58899988765432 2221 223334567788999888888 4568999
Q ss_pred EeCCCCceeEEeccCCC-CEEEEEEcCCCCEEEEec-CC-----CeEEEEECCccc
Q 023018 134 WDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGS-ED-----STVWMWNADRAA 182 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~~~ 182 (288)
||..+++....-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+.+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99887754332211111 123455667899999988 34 468999987653
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=6.9e-05 Score=63.91 Aligned_cols=204 Identities=14% Similarity=0.102 Sum_probs=122.8
Q ss_pred CEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCeeeEeeccc---cCcEEEEEE-------ecCCCEEEEEeCCC-----
Q 023018 66 EVYSVACSPT-DATLVATGGGDDKGFFWRINQGDWASEIQGH---KDSVSSLAF-------SMDGQLLASGGLDG----- 129 (288)
Q Consensus 66 ~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~~~i~~~~~-------~~~~~~l~~~~~dg----- 129 (288)
....|+|.|. ++.++++....+.|++.|+.++.....+... ......++| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 4556666555567888888877665544321 234789999 99999676665543
Q ss_pred --eEEEEeCCC-Ccee-----EEeccCCCCEEEEEEcC-CCCEEEEecCCCeEEEEECC-------cccE----------
Q 023018 130 --LVQIWDPSS-GNLK-----CTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNAD-------RAAY---------- 183 (288)
Q Consensus 130 --~i~i~d~~~-~~~~-----~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~-------~~~~---------- 183 (288)
.|.+++... +... ..+... .....++.+| ++.++++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665333 1221 222211 2345788899 55566667778899999987 4432
Q ss_pred -EEE-ee-ccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeC--CCCce--eEEEcCC---Cc---------cccCeE-EE
Q 023018 184 -LNM-FS-GHGSSVTCGDFTPDGKTICTGS-DDATLRVWNP--KSGEN--IHVIRGH---PY---------HTEGLT-CL 242 (288)
Q Consensus 184 -~~~-~~-~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~--~~~~~--~~~~~~~---~~---------~~~~v~-~~ 242 (288)
... +. ......+.|+|+|++++|+.+. ....|+.++. .++.. ...+.+. .. .-.... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 111 22 1234568999999999766554 5678888554 33321 1233221 00 112234 45
Q ss_pred EEc-------CCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 243 TIS-------ADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 243 ~~~-------~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
+.. +++.++++-....+|+.++ .+|...
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~ 413 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS 413 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCCEE
Confidence 554 4567777767788999998 566543
No 290
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=0.00013 Score=66.50 Aligned_cols=198 Identities=9% Similarity=0.053 Sum_probs=125.7
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec--cccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCce
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (288)
...|.++...+ ++.+. .|+.++-|..++..+++...... .....|.++...+++. |..|+. +-|..|+..+++.
T Consensus 406 ~~~v~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 406 SNSVLCSLKDS-EGNLW-FGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CSBEEEEEECT-TSCEE-EEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSC
T ss_pred CcceEEEEECC-CCCEE-EEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeE
Confidence 35688888876 45444 46666678889887765433221 1346788988887776 444555 4588899887665
Q ss_pred eEEeccC-----CCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeec----cCCCeEEEEEcCCCCEEEEEeCC
Q 023018 142 KCTLEGP-----GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG----HGSSVTCGDFTPDGKTICTGSDD 212 (288)
Q Consensus 142 ~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~p~~~~l~~~~~d 212 (288)
....... ...|.++...++|.+.+. +..+-+..|+..+++. ..+.. ....|.++...++|.+.+ ++..
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~ 558 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWL-ATGE 558 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEE-EETT
T ss_pred EecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEE-EECC
Confidence 4433222 357999999888875554 4434477888766543 33321 235688998888877554 4556
Q ss_pred CeEEEEeCCCCceeEEEcCCC-ccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 213 ATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
|.|..||..+++. ..+.... .....|.++...++|.+.++ +..| |..|+..+++..
T Consensus 559 Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~G-l~~~~~~~~~~~ 615 (781)
T 3v9f_A 559 GLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAS-TNTG-ISCYITSKKCFY 615 (781)
T ss_dssp EEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEE-CSSC-EEEEETTTTEEE
T ss_pred CceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEE-cCCc-eEEEECCCCceE
Confidence 6558999876653 3333211 12345788888888876554 4444 777888766543
No 291
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.47 E-value=0.00018 Score=57.84 Aligned_cols=187 Identities=13% Similarity=0.081 Sum_probs=109.5
Q ss_pred CCEEEEEEcCCCCcEEEEEeC-CC-eEEEEEccCCeeeEeecc-ccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCce
Q 023018 65 DEVYSVACSPTDATLVATGGG-DD-KGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~-dg-~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 141 (288)
.....+++.+ +++++++... ++ .|..++..+++....... .......++..+.+..+++-...+.|.++|...++.
T Consensus 72 ~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 4688999999 5556555433 22 466677667664332221 112234455555544444444688999999876431
Q ss_pred -eEEec---------cCCCCEEEEEEcCCCCEEEE-ecCCCeEEEEECCc-ccE--EEEeeccCCCeEEEEEcCCCCEEE
Q 023018 142 -KCTLE---------GPGGGVEWVSWHPRGHIVLA-GSEDSTVWMWNADR-AAY--LNMFSGHGSSVTCGDFTPDGKTIC 207 (288)
Q Consensus 142 -~~~~~---------~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~~p~~~~l~ 207 (288)
+.... ..-.....+ +|+++.|++ -+..+.|..|++.. ++. ...+.. ......+++.++|++++
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~v 227 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYG 227 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEE
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEE
Confidence 11110 111235556 777765544 45678999999864 321 112211 13456788999998777
Q ss_pred EEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEc---CCCCEEEEEeCC
Q 023018 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS---ADSTLALSGSKD 257 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~d 257 (288)
+....+.|.++|.. ++...... ........++++|. |++..|++.+..
T Consensus 228 a~~~~~~V~~~~~~-G~~~~~~~-~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 228 ATHIYNSVVRIAPD-RSTTIIAQ-AEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECBTTCCEEEECTT-CCEEEEEC-GGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EeCCCCeEEEECCC-CCEEEEee-cccccCCceEEEEecccCCCCEEEEECCC
Confidence 76677899999975 55432211 11123568899998 887777766554
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.45 E-value=0.00068 Score=60.06 Aligned_cols=205 Identities=10% Similarity=0.029 Sum_probs=131.7
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc------ccCcEEEEEEecCCCEEE-EEeCCCeEEEEeCC
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG------HKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPS 137 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~ 137 (288)
..+.+++|.+.++.++.+=...+.|+.+++........+.. .......+++...++.|. +-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 45788999986666666666678888888765433333322 233578999998766554 55567899999986
Q ss_pred CCceeEE-eccCCCCEEEEEEcC-CCCEEEEecCCC--eEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC-C
Q 023018 138 SGNLKCT-LEGPGGGVEWVSWHP-RGHIVLAGSEDS--TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-D 212 (288)
Q Consensus 138 ~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~-d 212 (288)
++.... +.........|+++| .|.++++-.... .|...++............-...+.|++.+..+.|+.+.. .
T Consensus 420 -G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 420 -GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp -SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred -CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCC
Confidence 444333 333445689999999 555555543333 6777777543322223323446789999998888877764 5
Q ss_pred CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 213 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
+.|..+++. |...+.+... .......++... +.++++-...+.|...|..+|+....+
T Consensus 499 ~~I~~~~~d-G~~r~~~~~~--~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 499 RRIESSDLS-GANRIVLEDS--NILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp TEEEEEETT-SCSCEEEECS--SCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred CEEEEEeCC-CCceEEEEcC--CCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 789999985 4444444421 234456777765 455555556778999998888755443
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.45 E-value=5e-06 Score=75.45 Aligned_cols=154 Identities=14% Similarity=0.188 Sum_probs=97.2
Q ss_pred cEEEEEEe-cCCCEEEEEeC-CC----eEEEEeCCCC-ceeE-EeccCCCCEEEEEEcCCCCEEEEecCC-----CeEEE
Q 023018 109 SVSSLAFS-MDGQLLASGGL-DG----LVQIWDPSSG-NLKC-TLEGPGGGVEWVSWHPRGHIVLAGSED-----STVWM 175 (288)
Q Consensus 109 ~i~~~~~~-~~~~~l~~~~~-dg----~i~i~d~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i 175 (288)
.+...+|+ |+|++||.+.. +| .|+++|+.++ +.+. .+. .....++|+|+++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99998875542 33 5999999988 6321 111 113467899999888777654 36888
Q ss_pred EECCcccE--EEEee-ccCCCeEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCc-ee--EEEcCCCccccCeEEEEEcC
Q 023018 176 WNADRAAY--LNMFS-GHGSSVTCGDFTPDGKTICTGSD---DATLRVWNPKSGE-NI--HVIRGHPYHTEGLTCLTISA 246 (288)
Q Consensus 176 ~d~~~~~~--~~~~~-~~~~~i~~~~~~p~~~~l~~~~~---dg~i~i~d~~~~~-~~--~~~~~~~~~~~~v~~~~~~~ 246 (288)
+++.++.. ...+. ........+.|+|+|++|+..+. ...|+++|+.++. .. ..+... ......++.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR--EKGVRYDVQMHG 329 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC--CTTCCEEEEEET
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC--CCCceEEEeeee
Confidence 88877532 22332 12234677899999999876653 3468889988752 22 333321 234455566554
Q ss_pred CCCEEEEEeCC----CcEEEEEcCC
Q 023018 247 DSTLALSGSKD----GSVHMVNITT 267 (288)
Q Consensus 247 ~~~~l~~~~~d----g~i~iwd~~t 267 (288)
.+.+++....+ ..|..+++.+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 44444554443 3677778765
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.41 E-value=0.00041 Score=58.61 Aligned_cols=200 Identities=13% Similarity=0.211 Sum_probs=114.3
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCC---Ce-EEEEEccCCee-eEeeccccCcEEEEEEec-CCCEEEEEeCCCeEEEEeC
Q 023018 63 HSDEVYSVACSPTDATLVATGGGD---DK-GFFWRINQGDW-ASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~d---g~-i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~ 136 (288)
.......+++++ ++.++++.... .. +...+...... ...+. .-.....++++| ++.++++-..++.|+.++.
T Consensus 180 ~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 180 NIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred CCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
Confidence 344578888988 45555544321 11 22233221111 01121 122345688999 6665555556789999998
Q ss_pred CCCceeEE-ecc-CCCCEEEEEEcCCCCEE-EEecCCCeEEEEECC--cccE--EEEeecc---------------CCCe
Q 023018 137 SSGNLKCT-LEG-PGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNAD--RAAY--LNMFSGH---------------GSSV 194 (288)
Q Consensus 137 ~~~~~~~~-~~~-~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~--~~~~--~~~~~~~---------------~~~i 194 (288)
.++..... +.. .......++|+|+++.| ++-...+.|+.++.. ++.. ...+.+. -...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P 337 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGP 337 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSE
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCC
Confidence 87765222 221 22234579999999854 455567889998864 2221 1111111 1236
Q ss_pred EEEEE---------cCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCc---------------cccCeEEEEEc-CCCC
Q 023018 195 TCGDF---------TPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY---------------HTEGLTCLTIS-ADST 249 (288)
Q Consensus 195 ~~~~~---------~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~~~v~~~~~~-~~~~ 249 (288)
..+++ .+++.++++-...+.|+.++. +|. +.++.+... .-.....|+++ +++.
T Consensus 338 ~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 415 (433)
T 4hw6_A 338 NQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC 415 (433)
T ss_dssp EEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred ccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE
Confidence 77898 666666666666788999985 554 344432210 11346788888 5666
Q ss_pred EEEEEeCCCcEEEEEcC
Q 023018 250 LALSGSKDGSVHMVNIT 266 (288)
Q Consensus 250 ~l~~~~~dg~i~iwd~~ 266 (288)
++++-...++|+.+++.
T Consensus 416 lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 416 FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEecC
Confidence 66666667788877753
No 295
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.33 E-value=0.00012 Score=65.41 Aligned_cols=188 Identities=15% Similarity=0.183 Sum_probs=110.0
Q ss_pred EEEEEEcCCCCcEEEEEeC-CCeEEEEEccCCeeeEeeccccC-cEEEEEEecCCCEEEEEe-CC-----CeEEEEeCCC
Q 023018 67 VYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQGHKD-SVSSLAFSMDGQLLASGG-LD-----GLVQIWDPSS 138 (288)
Q Consensus 67 v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~ 138 (288)
..++++.+ ++.+++.|+. +..+.+||..+.+....-.-+.. .-.+++..++++.++.|+ .+ ..+.+||..+
T Consensus 245 ~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 245 CPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 44566667 6778888874 45899999988765543221111 113455667888888887 34 5688999876
Q ss_pred CceeEE-------ec-c-------C----------C---------------------------------------CCEEE
Q 023018 139 GNLKCT-------LE-G-------P----------G---------------------------------------GGVEW 154 (288)
Q Consensus 139 ~~~~~~-------~~-~-------~----------~---------------------------------------~~i~~ 154 (288)
++.... +. . . . ..-.+
T Consensus 324 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 324 KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence 643221 00 0 0 0 01122
Q ss_pred EEEcC-CCCEEEEecCCC-----------eEEEEECCcccEEEEe--eccCCC-eEEEEEcCCCCEEEEEeCC-------
Q 023018 155 VSWHP-RGHIVLAGSEDS-----------TVWMWNADRAAYLNMF--SGHGSS-VTCGDFTPDGKTICTGSDD------- 212 (288)
Q Consensus 155 ~~~~~-~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~~-i~~~~~~p~~~~l~~~~~d------- 212 (288)
+.|.. +++++++|+.++ .|.+||..+..-.... ...... -.++...|+++.++.|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~ 483 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCC
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCC
Confidence 33322 567777777432 6778887765543322 112222 2345667899999998854
Q ss_pred ----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeC
Q 023018 213 ----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (288)
Q Consensus 213 ----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (288)
..+.+||..+.+ ...+.........-....+.|++++++.|+.
T Consensus 484 ~~~~~~v~~ydp~t~~-W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 484 STPVFTPEIYVPEQDT-FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSBCCCCEEEEGGGTE-EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCcccceEEEcCCCCc-eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999987654 2333322212222334556789999999885
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.31 E-value=0.0016 Score=57.65 Aligned_cols=202 Identities=9% Similarity=-0.021 Sum_probs=123.6
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEE-EEeCCCeEEEEeCCCCceeE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~ 143 (288)
..+.+++|.+.++.++++-...+.|+.+++........+...-.....+++.+.+..|+ +-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 34678888885666666666678888888775443333332224556888987555444 44567899999987554333
Q ss_pred EeccCCCCEEEEEEcCCCCEEEEec--CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeC
Q 023018 144 TLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-DATLRVWNP 220 (288)
Q Consensus 144 ~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~-dg~i~i~d~ 220 (288)
.+...-.....|++.|....|+.+. ..+.|...++............-.....|++++.+..|+.+.. .+.|..+++
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEES
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEec
Confidence 3333445689999999644444443 2367877777543322222323456789999998788877754 467999998
Q ss_pred CCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
........+... ......++...+ .+.++-...+.|...+..+|..
T Consensus 509 dG~~~~~~~~~~---l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 509 DGTGRRVLVEDK---IPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp SSCCCEEEEECC---CCSSCCEEEETT-EEEEECTTSSCEEEEESSSCCE
T ss_pred CCCceEEEeccC---CCCcEEEEEECC-EEEEeecCCCeEEEEEcCCCce
Confidence 644332222221 122334555543 3434444567888889888854
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.29 E-value=0.00082 Score=53.66 Aligned_cols=199 Identities=14% Similarity=0.154 Sum_probs=130.5
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC-CceeEEeccC
Q 023018 70 VACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP 148 (288)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~ 148 (288)
.-.+| ....+|.-. ...+.|+|+++.+.++.+.- ...|.-=.|-... .|+..+ +..|+-|++.. ..+.+.+..|
T Consensus 72 AIMnP-~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 72 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeCC-CccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 33588 666777665 58899999999998888874 4577777776443 454444 46899999874 3455555543
Q ss_pred ----CCCEEEEEEcCCCCEEEEecC-------CCeEEEEECCcccEEEEeeccCCCeEEEEEcC--CC-CEEEEEeC---
Q 023018 149 ----GGGVEWVSWHPRGHIVLAGSE-------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP--DG-KTICTGSD--- 211 (288)
Q Consensus 149 ----~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p--~~-~~l~~~~~--- 211 (288)
...|..-..+++.++++..+- .|.+.+|..+.+ .-+.+.+|......+.+.- .. ..++.+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 345777777888887776542 367889988654 3556666655444333321 11 13333332
Q ss_pred CCeEEEEeCCCC---c------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 212 DATLRVWNPKSG---E------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 212 dg~i~i~d~~~~---~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+.++|.++... . .+..+........-..++..++.-.+++..+.-|.|++||+.||.++..-
T Consensus 226 g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp EEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEe
Confidence 258999987432 1 11112222223455678899998888899999999999999999999865
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.27 E-value=0.0012 Score=54.82 Aligned_cols=199 Identities=14% Similarity=0.157 Sum_probs=131.1
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCC-CceeEEeccC
Q 023018 70 VACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP 148 (288)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~ 148 (288)
.-.+| ..+.+|.-. ..++.|+|+++.+.++.+.-. ..|.-=.|-... .|+..+ +..|+-|++.. ..+.+.|..|
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred eeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecc
Confidence 44677 556666655 589999999999988887743 456556675443 455444 46899999864 3455555543
Q ss_pred ----CCCEEEEEEcCCCCEEEEecC-------CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCC---CEEEEEeC---
Q 023018 149 ----GGGVEWVSWHPRGHIVLAGSE-------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG---KTICTGSD--- 211 (288)
Q Consensus 149 ----~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~---~~l~~~~~--- 211 (288)
...|..-..+++.++++..+- .|.+.+|..+.+. -+.+.+|......+.+.-+. ..++.+..
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 345777777888888775442 4778899986553 45566676555444433211 23444443
Q ss_pred CCeEEEEeCCCC---c------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 212 DATLRVWNPKSG---E------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 212 dg~i~i~d~~~~---~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+.++|.++... . .+..+...........++..++...+++..+.-|.|++||+.||.++..-
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeee
Confidence 278999988432 1 11111122223455678899998888899999999999999999999865
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.23 E-value=0.00036 Score=56.51 Aligned_cols=156 Identities=12% Similarity=0.168 Sum_probs=104.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEeccCCCCEEEEEEcCC----CC---EEEEec-C--CCeEEEEEC--CcccEEEE
Q 023018 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPR----GH---IVLAGS-E--DSTVWMWNA--DRAAYLNM 186 (288)
Q Consensus 119 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~-~--dg~i~i~d~--~~~~~~~~ 186 (288)
..+++.....+-+.+||+ +++.+..+.. +.++.+..-|. ++ ++++.. . +++|.+|++ .++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 346666677889999999 8888888754 55777777662 22 233333 3 578999976 3333 444
Q ss_pred eec------cC-CCeEEEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCceeEEEcCCCccccCeEEEEEcCCC
Q 023018 187 FSG------HG-SSVTCGDF--TPD-GK-TICTGSDDATLRVWNPK-------SGENIHVIRGHPYHTEGLTCLTISADS 248 (288)
Q Consensus 187 ~~~------~~-~~i~~~~~--~p~-~~-~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 248 (288)
+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++.+.. ...+-.|...+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l----gsq~EgcvvDd~~ 191 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM----NSQTEGMAADDEY 191 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC----SSCEEEEEEETTT
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC----CCCcceEEEcCCC
Confidence 421 11 45566777 774 44 68888889999999883 2345666663 4578889999988
Q ss_pred CEEEEEeCCCcEEEEEcC-----CCcEEEEe------cceEEEEE
Q 023018 249 TLALSGSKDGSVHMVNIT-----TGKVCCLN------FQYTCVAY 282 (288)
Q Consensus 249 ~~l~~~~~dg~i~iwd~~-----t~~~~~~~------~~~~~~~~ 282 (288)
..|+.+-++..|..++.. +++++... ..+.++++
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai 236 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI 236 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEE
Confidence 899999998777777755 45666554 24566655
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.22 E-value=6.4e-06 Score=73.98 Aligned_cols=180 Identities=11% Similarity=0.018 Sum_probs=108.5
Q ss_pred CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe-CCCeEEEEeCCC----CceeEEeccCCCCEEEEEEcCC-
Q 023018 87 DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQIWDPSS----GNLKCTLEGPGGGVEWVSWHPR- 160 (288)
Q Consensus 87 g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~~- 160 (288)
+.|+..++.+......+.. ...+..++|.+.+..|+.+. ..+.|+.+++.. ......+.........|++.+.
T Consensus 386 ~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred cceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 5677778776655444433 23456789998777666654 567899998875 2222222222223556788764
Q ss_pred CCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeEEEcCCCccccC
Q 023018 161 GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEG 238 (288)
Q Consensus 161 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~ 238 (288)
++++++-...+.|.++++........+.........|++.|.+.+|+.+.. .+.|.++++.. .....+... ....
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~--~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTE--NIQW 541 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCS--SCSS
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeC--CCCC
Confidence 445555556789999998765443333333345678899997666665543 26788887753 333333211 2344
Q ss_pred eEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCcE
Q 023018 239 LTCLTISADSTL-ALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 239 v~~~~~~~~~~~-l~~~~~dg~i~iwd~~t~~~ 270 (288)
...|+|+|++.. +++-...+.|.++++.....
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~ 574 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 574 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCC
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCce
Confidence 678999986544 44555667899999875433
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.15 E-value=0.0006 Score=56.49 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=96.2
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCCceeEEeccC----CCCEEEEEEcCCCCEEEEecCCCeEEEEECCccc---------
Q 023018 116 SMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--------- 182 (288)
Q Consensus 116 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------- 182 (288)
+.++..++++- ++.||..++......+.+... -..+..+..+|+|++||..+. ..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 34555555543 478888887754444444443 235788999999999999866 688888886321
Q ss_pred ---EEEEeec------cCCCeEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCc-eeEEEcCC------CccccCeEEEE
Q 023018 183 ---YLNMFSG------HGSSVTCGDFTP---DGKTICTGSDDATLRVWNPKSGE-NIHVIRGH------PYHTEGLTCLT 243 (288)
Q Consensus 183 ---~~~~~~~------~~~~i~~~~~~p---~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~------~~~~~~v~~~~ 243 (288)
..+.+.. ...+|..+.|+| .+..|++-..|+.|++||+.... ....+... ......|.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 1223332 256799999999 46689999999999999998532 11123211 11225688899
Q ss_pred EcCCCCEEEEEe--CCCcEEEE
Q 023018 244 ISADSTLALSGS--KDGSVHMV 263 (288)
Q Consensus 244 ~~~~~~~l~~~~--~dg~i~iw 263 (288)
|.+++-.|.+.+ ..|.|+..
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 998776666644 66766654
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.09 E-value=0.00024 Score=56.73 Aligned_cols=187 Identities=14% Similarity=0.198 Sum_probs=101.8
Q ss_pred CCcEEEEEeCC-----CeEEEEEccCCe---eeEe--eccccCcEEEEEEecCCCEEEEEeCC-----CeEEEEeCCCCc
Q 023018 76 DATLVATGGGD-----DKGFFWRINQGD---WASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGN 140 (288)
Q Consensus 76 ~~~~l~~~~~d-----g~i~iw~~~~~~---~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 140 (288)
++.+++.|+.+ ..+.+||+.+.+ .... +........++.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 55677777754 458899988765 3332 2211111122222 56666776643 368899988775
Q ss_pred eeEE--eccCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEECCcccEEEE--eeccCCCeEEEEEcCCCCEEEEEeC
Q 023018 141 LKCT--LEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 141 ~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++..++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCC
Confidence 4332 2222222233333 57777777654 4688999877643222 2111112222222 4566677765
Q ss_pred C-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEE
Q 023018 212 D-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVC 271 (288)
Q Consensus 212 d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~ 271 (288)
+ ..+.+||+.+.+- ..+...+........+.+ ++.+++.|+.+ ..|.+||+.+.+-.
T Consensus 216 ~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSW-TTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp CSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred CCCcccceEEEEeCCCCcE-EECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 4 4689999987643 333322212222222232 56777777655 46889999886543
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0038 Score=53.34 Aligned_cols=205 Identities=11% Similarity=0.045 Sum_probs=116.6
Q ss_pred CEEEEEE-------cCCCCcEEEEEeCCC------eEEEEEccC-Ceee-----EeeccccCcEEEEEEecCCC-EEEEE
Q 023018 66 EVYSVAC-------SPTDATLVATGGGDD------KGFFWRINQ-GDWA-----SEIQGHKDSVSSLAFSMDGQ-LLASG 125 (288)
Q Consensus 66 ~v~~~~~-------~~~~~~~l~~~~~dg------~i~iw~~~~-~~~~-----~~~~~~~~~i~~~~~~~~~~-~l~~~ 125 (288)
....++| ++.+..++++...++ .|.+.+... +... ..+.... ....++++|++. ++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEE
Confidence 5889999 984433555544432 255554333 2221 2222222 335678899544 45555
Q ss_pred eCCCeEEEEeCC-------CCce-----------eEE-ecc-CCCCEEEEEEcCCCCEEE-EecCCCeEEEEEC--Cccc
Q 023018 126 GLDGLVQIWDPS-------SGNL-----------KCT-LEG-PGGGVEWVSWHPRGHIVL-AGSEDSTVWMWNA--DRAA 182 (288)
Q Consensus 126 ~~dg~i~i~d~~-------~~~~-----------~~~-~~~-~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~--~~~~ 182 (288)
...+.|..+|+. ++.. ... +.. .....+.++|+|+++.|+ +-+..+.|+.++. ..+.
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~ 345 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKE 345 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcce
Confidence 678899999987 5543 112 222 234568999999999544 4456788998654 3332
Q ss_pred E--EEEeecc---C------------CCeE-EEEEc-------CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC----
Q 023018 183 Y--LNMFSGH---G------------SSVT-CGDFT-------PDGKTICTGSDDATLRVWNPKSGENIHVIRGHP---- 233 (288)
Q Consensus 183 ~--~~~~~~~---~------------~~i~-~~~~~-------p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---- 233 (288)
. ...+-+. . .... .+... +.+.++++=...+.|+.++. +|. +.++.+..
T Consensus 346 ~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~ 423 (496)
T 3kya_A 346 FITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTS 423 (496)
T ss_dssp ECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHH
T ss_pred ecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEeccccccc
Confidence 1 0122111 0 1234 44454 45555565566788999994 563 44553320
Q ss_pred -------c----------cccCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEE
Q 023018 234 -------Y----------HTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVCCL 273 (288)
Q Consensus 234 -------~----------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~t~~~~~~ 273 (288)
. .-.....|+++++ +.++++=....+|+.+++.....+.-
T Consensus 424 ~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 424 LADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp HHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC----
T ss_pred ccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccccc
Confidence 0 1134678999986 77766666778999999887655543
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.07 E-value=0.00028 Score=56.47 Aligned_cols=188 Identities=21% Similarity=0.294 Sum_probs=101.3
Q ss_pred CCcEEEEEeCC-----CeEEEEEccCCeeeEee--ccccCcEEEEEEecCCCEEEEEeCCC-----eEEEEeCCCCceeE
Q 023018 76 DATLVATGGGD-----DKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASGGLDG-----LVQIWDPSSGNLKC 143 (288)
Q Consensus 76 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~ 143 (288)
++.+++.|+.+ ..+.+||..+.+....- .........+.+ ++..++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 55677777754 35888998877644332 211111122222 566777776543 57788988775433
Q ss_pred E--eccCCCCEEEEEEcCCCCEEEEecCC-------CeEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCEEEEEeCC
Q 023018 144 T--LEGPGGGVEWVSWHPRGHIVLAGSED-------STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSDD 212 (288)
Q Consensus 144 ~--~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~~~~d 212 (288)
. +.........+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++..++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 2 2222222223333 56777777642 458899987764222 22211112222222 46666777654
Q ss_pred -----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCcEEE
Q 023018 213 -----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-----SVHMVNITTGKVCC 272 (288)
Q Consensus 213 -----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~t~~~~~ 272 (288)
..+.+||+.+.+- ..+...+........+.+ ++.+++.|+.++ .+.+||+.+.+-..
T Consensus 215 ~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAW-RQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp SSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCcccceEEEEeCCCCCE-eeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 3688999987643 333322211112222222 567777777553 58999998876443
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.07 E-value=0.0029 Score=51.29 Aligned_cols=198 Identities=17% Similarity=0.141 Sum_probs=109.2
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec---cccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ---GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 140 (288)
...+.++.|.+ +..+++ +..|.|+. ....++.-.... .+...+..+.+.+++..++++ .+|.|.. ....++
T Consensus 79 ~~~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG--NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET--TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS
T ss_pred CccEEEEEecC--CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC
Confidence 34688899976 344444 44564443 222232211111 233457788887777666655 4554432 122333
Q ss_pred eeEEe-ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEEC--CcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 023018 141 LKCTL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNA--DRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (288)
Q Consensus 141 ~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i 217 (288)
.-... ......+..+.+.+++.+++++...+..+-.|- .+.+.+. ......+..+.+.+++..+ .++.+|.+++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 32222 334457899999998888877755443444442 2333332 2345678899999988655 4556788877
Q ss_pred EeCCCCceeEEEcCC-CccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 218 WNPKSGENIHVIRGH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 218 ~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
.+...++....+... -.....+..+.+.+++.+++++ .+|.| ++....|+.-.
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~ 283 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQ 283 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCE
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccE
Confidence 643324333222211 0122458889999877776665 46766 44555454333
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.05 E-value=0.00071 Score=54.16 Aligned_cols=187 Identities=16% Similarity=0.264 Sum_probs=102.2
Q ss_pred CCcEEEEEeCC----CeEEEEEccCCeeeEee--ccccCcEEEEEEecCCCEEEEEeCC------CeEEEEeCCCCceeE
Q 023018 76 DATLVATGGGD----DKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASGGLD------GLVQIWDPSSGNLKC 143 (288)
Q Consensus 76 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~ 143 (288)
++.+++.|+.+ ..+.+||+.+.+....- .........+.+ +++.++.|+.+ ..+.+||+.+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 55677777754 56888998887654332 211111122222 56677777654 468899988875433
Q ss_pred E--eccCCCCEEEEEEcCCCCEEEEecC---------CCeEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 144 T--LEGPGGGVEWVSWHPRGHIVLAGSE---------DSTVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 144 ~--~~~~~~~i~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
. +.........+.+ ++++++.|+. -..+.+||+.+.+-.. .+.........+.+ +++.++.|+
T Consensus 133 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeC
Confidence 2 2212222222333 5677777763 3458899988764222 22111111222222 456666665
Q ss_pred CC-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEE
Q 023018 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVC 271 (288)
Q Consensus 211 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~ 271 (288)
.+ ..+.+||+.+.+ ...+...+........+.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 209 ~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp EETTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred CCCCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 43 358899998764 3333322212222233333 66777888754 56899999887543
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.00 E-value=0.0042 Score=50.77 Aligned_cols=192 Identities=11% Similarity=0.109 Sum_probs=112.5
Q ss_pred eEeecCCCCEEEEEEcCCCCcEEEEE------------eCCCeEEEEEccCC-eeeEee--cc-----ccCcEEEEEEec
Q 023018 58 HIFSGHSDEVYSVACSPTDATLVATG------------GGDDKGFFWRINQG-DWASEI--QG-----HKDSVSSLAFSM 117 (288)
Q Consensus 58 ~~~~~h~~~v~~~~~~~~~~~~l~~~------------~~dg~i~iw~~~~~-~~~~~~--~~-----~~~~i~~~~~~~ 117 (288)
+.+.+-....-.++..| ++..++++ ..+|.|.++|+.+. .....+ .+ .......+.+.+
T Consensus 43 ~~i~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp EECTTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEE
T ss_pred EEeCCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEE
Confidence 33444223345566677 55554444 26899999998742 111222 21 223567777766
Q ss_pred --CCC-EEEEEe-C--CCeEEEEeCCCCc-e---eEEecc-CCCCEEEEEEcCCCCEEEEec-----------------C
Q 023018 118 --DGQ-LLASGG-L--DGLVQIWDPSSGN-L---KCTLEG-PGGGVEWVSWHPRGHIVLAGS-----------------E 169 (288)
Q Consensus 118 --~~~-~l~~~~-~--dg~i~i~d~~~~~-~---~~~~~~-~~~~i~~~~~~~~~~~l~~~~-----------------~ 169 (288)
++. +|+++. . +.+|.+|++.... . +..+.+ .-...+.+.+.++|.++++.. .
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~ 201 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 201 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence 354 455553 2 4678887765432 2 222332 234688999999998777754 1
Q ss_pred CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEeCCC-Cce--eEEEcCCCccccCeEEEEEc
Q 023018 170 DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKS-GEN--IHVIRGHPYHTEGLTCLTIS 245 (288)
Q Consensus 170 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~-~dg~i~i~d~~~-~~~--~~~~~~~~~~~~~v~~~~~~ 245 (288)
.|.|+.++.. + +..+...-...+.++|+|+++.|+.+. ..+.|..|++.. +.. .+.+. .....-.+++.
T Consensus 202 ~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~----~~g~PDGi~vD 274 (355)
T 3sre_A 202 WSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS----FDTLVDNISVD 274 (355)
T ss_dssp CEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE----CSSEEEEEEEC
T ss_pred ccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe----CCCCCceEEEe
Confidence 2556666653 2 222222334578999999999887765 567899999863 322 22332 23556788999
Q ss_pred C-CCCEEEEEeCC
Q 023018 246 A-DSTLALSGSKD 257 (288)
Q Consensus 246 ~-~~~~l~~~~~d 257 (288)
+ +|++.+++..+
T Consensus 275 ~e~G~lwva~~~~ 287 (355)
T 3sre_A 275 PVTGDLWVGCHPN 287 (355)
T ss_dssp TTTCCEEEEEESC
T ss_pred CCCCcEEEEecCC
Confidence 9 59887766533
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.92 E-value=0.0012 Score=52.67 Aligned_cols=188 Identities=18% Similarity=0.261 Sum_probs=100.9
Q ss_pred CCcEEEEEe-CC-----CeEEEEEccCCeeeEee--ccccCcEEEEEEecCCCEEEEEeCC-----CeEEEEeCCCCc--
Q 023018 76 DATLVATGG-GD-----DKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGN-- 140 (288)
Q Consensus 76 ~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-- 140 (288)
++.+++.|+ .+ ..+.+||+.+.+....- .........+ ..++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666666 32 36888998877644322 2111111222 2356677777654 468899988776
Q ss_pred -eeEE--eccCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEECCcccE--EEEeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 141 -LKCT--LEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAY--LNMFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 141 -~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+- +..+.........+.+ ++..++.|+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 3332 2222222233333 56777777643 3688999877542 2222211112222222 566667766
Q ss_pred CC-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEEE
Q 023018 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVCC 272 (288)
Q Consensus 211 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~~ 272 (288)
.+ ..+.+||+.+.+- ..+...+........+.+ ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 54 4588999887643 333322211122222222 56777777654 469999998876443
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.89 E-value=0.0067 Score=49.66 Aligned_cols=217 Identities=11% Similarity=0.071 Sum_probs=115.6
Q ss_pred EeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCee--eEeec---cccCcEEEEEEecC---CCEEEEEeC-C-
Q 023018 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW--ASEIQ---GHKDSVSSLAFSMD---GQLLASGGL-D- 128 (288)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~---~~~~~i~~~~~~~~---~~~l~~~~~-d- 128 (288)
.+...-..-..++|.| ++.++++ ...|.|++++ +++. +..+. ........|+|+|+ +..|+++.. .
T Consensus 25 ~va~~l~~P~~ia~~p-dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 25 EVVGGLEVPWALAFLP-DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp EEECCCSCEEEEEECT-TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred EEECCCCCceEEEEcC-CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC
Confidence 3333334567999999 6666554 5569999988 4432 11111 12346789999998 555554433 2
Q ss_pred ----CeEEEEeCCCCc-----ee-EEec---cCCCCEEEEEEcCCCCEEEEecC-------------CCeEEEEECCcc-
Q 023018 129 ----GLVQIWDPSSGN-----LK-CTLE---GPGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRA- 181 (288)
Q Consensus 129 ----g~i~i~d~~~~~-----~~-~~~~---~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~- 181 (288)
+.|..|+...+. .+ ..+. ........++|.|+|.++++.+. .|.|.-++....
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~ 180 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEP 180 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSB
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCC
Confidence 567778776432 11 1133 11123468999999976666432 256666665430
Q ss_pred -----------cEEEEeeccCCCeEEEEEcC-CCCEEEEEeCCCe--------EEEEeCCCCc-----------------
Q 023018 182 -----------AYLNMFSGHGSSVTCGDFTP-DGKTICTGSDDAT--------LRVWNPKSGE----------------- 224 (288)
Q Consensus 182 -----------~~~~~~~~~~~~i~~~~~~p-~~~~l~~~~~dg~--------i~i~d~~~~~----------------- 224 (288)
.....+..--.....++|+| ++.++++-..... |.+.. .+.
T Consensus 181 p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~ 258 (352)
T 2ism_A 181 APGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYR 258 (352)
T ss_dssp CTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSC
T ss_pred CCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCc
Confidence 01111111112356789999 5655444332222 33332 221
Q ss_pred -eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE-------EEE---ecceEEEEEeecc
Q 023018 225 -NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV-------CCL---NFQYTCVAYDLDF 286 (288)
Q Consensus 225 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~-------~~~---~~~~~~~~~~~df 286 (288)
++..+. .......++| .+|.++++.-..+.|...++..... ... ...+..+++.||-
T Consensus 259 ~p~~~~~----~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 259 DPLYFWP----QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG 326 (352)
T ss_dssp CCSEECT----TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred CCeEecC----CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence 111111 1234566777 4677766666677888888764431 111 1456777777763
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.87 E-value=0.0025 Score=50.95 Aligned_cols=186 Identities=11% Similarity=0.145 Sum_probs=99.5
Q ss_pred CcEEEEEeC--CCeEEEEEccCCeeeEe--eccccCcEEEEEEecCCCEEEEEeCC----CeEEEEeCCCCceeEEe--c
Q 023018 77 ATLVATGGG--DDKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD----GLVQIWDPSSGNLKCTL--E 146 (288)
Q Consensus 77 ~~~l~~~~~--dg~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~--~ 146 (288)
+.+++.|+. ...+.+||..+.+.... +.........+. .++..++.|+.+ ..+.+||+.+.+....- .
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 445666654 35688999888765432 211111112222 256677777654 67889999887543332 2
Q ss_pred cCCCCEEEEEEcCCCCEEEEecCC------CeEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCEEEEEeC-------
Q 023018 147 GPGGGVEWVSWHPRGHIVLAGSED------STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSD------- 211 (288)
Q Consensus 147 ~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~~~~------- 211 (288)
........+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++..++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTC
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcc
Confidence 22222233333 56777887754 468999988764322 22111111222222 4555666653
Q ss_pred --CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEE
Q 023018 212 --DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVC 271 (288)
Q Consensus 212 --dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~ 271 (288)
-..+.+||+.+.+ ...+...+.....-..+.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 166 ~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 166 RVLNSCEVYDPATET-WTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp EECCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred cccceEEEeCCCCCe-EEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 3458899998764 3333322211122222222 56677776643 46899999886533
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.84 E-value=0.0039 Score=46.91 Aligned_cols=175 Identities=15% Similarity=0.103 Sum_probs=98.5
Q ss_pred CCcEEEEEeCCCeEEEEEccCCe------eeEeecc-ccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCcee------
Q 023018 76 DATLVATGGGDDKGFFWRINQGD------WASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK------ 142 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------ 142 (288)
...+|++...| +++.=...... ...++-. --..+.+++|+|++.+.++ .+|.++-.+..+....
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 34566666776 66655444433 1112211 0236779999999986666 6788777776552211
Q ss_pred EEec-cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccE-------EEEeeccCCCeEEEEEcCCCCEEEEEeCCCe
Q 023018 143 CTLE-GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY-------LNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (288)
Q Consensus 143 ~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~ 214 (288)
..+- ..-....++.|.|+|.+.++ .||.|+-++-.+... ...-..--..+..|.+.|+|.+.++. ++.
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 1111 01112478999999988888 559998887543211 11111112467999999999877666 777
Q ss_pred EEEEeCCCCc------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEE
Q 023018 215 LRVWNPKSGE------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVH 261 (288)
Q Consensus 215 i~i~d~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 261 (288)
++-....++. ....+... .-...+.+.|.+++.+.++. +|.++
T Consensus 156 lyr~~~P~~~~~~wl~~~~~~g~~--g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 156 FYKALPPVSNQDNWLARATKIGQG--GWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEEECCCSSTTCCHHHHCEEEESS--SGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred EEecCCCCCCCcccccccceeccC--CcceEEEEEECCCCcEEEEe--CCeEE
Confidence 6544333221 11222211 12234556788888776665 66444
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.80 E-value=0.0027 Score=52.67 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=93.3
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeEeeccc----cCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCc-----------
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWASEIQGH----KDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN----------- 140 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------- 140 (288)
++.-++.+- ++.||.-++.....-+.+... -..|..+..+|+|++||..+ +..|.|..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 333443433 267777777644433333321 22577899999999999886 4578888877332
Q ss_pred -eeEEecc------CCCCEEEEEEcC---CCCEEEEecCCCeEEEEECCcc--cEEEEee---------ccCCCeEEEEE
Q 023018 141 -LKCTLEG------PGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRA--AYLNMFS---------GHGSSVTCGDF 199 (288)
Q Consensus 141 -~~~~~~~------~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~---------~~~~~i~~~~~ 199 (288)
..+.+.. ...+|..+.||| .+..|++-..|+.|++||+... ++. .++ .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1112221 256799999999 4568999999999999999752 122 221 12256889999
Q ss_pred cCCCCEEEEEe--CCCeEEEE
Q 023018 200 TPDGKTICTGS--DDATLRVW 218 (288)
Q Consensus 200 ~p~~~~l~~~~--~dg~i~i~ 218 (288)
.+++-.|+..+ ..|.|+-.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEEecCCCCCEEEE
Confidence 99888888866 78888754
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.77 E-value=0.0017 Score=52.25 Aligned_cols=189 Identities=13% Similarity=0.117 Sum_probs=98.4
Q ss_pred CCcEEEEEeC-----C------CeEEEEEccCCeeeEee--ccccCcEEEEEEecCCCEEEEEeCC--------CeEEEE
Q 023018 76 DATLVATGGG-----D------DKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASGGLD--------GLVQIW 134 (288)
Q Consensus 76 ~~~~l~~~~~-----d------g~i~iw~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~ 134 (288)
++.+++.|+. . ..+.+||..+.+....- .........+.+ ++..++.|+.+ ..+.+|
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEE
Confidence 5567777763 1 12778888876653321 111111112222 55666666632 458899
Q ss_pred eCCCCceeEE--eccCCCCEEEEEEcCCCCEEEEecC-C-----CeEEEEECCcccEE--EEeeccCCCeEEEEEcCCCC
Q 023018 135 DPSSGNLKCT--LEGPGGGVEWVSWHPRGHIVLAGSE-D-----STVWMWNADRAAYL--NMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 135 d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~p~~~ 204 (288)
|+.+.+.... +.........+. .++++++.|+. + ..+.+||+.+.+-. ..+........++.+ +++
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 198 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGR 198 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE
T ss_pred CCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCE
Confidence 9887753322 222222222333 35667777775 2 46899998775422 222111111222222 566
Q ss_pred EEEEEeCCC-----eEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC--------------CcEEEEEc
Q 023018 205 TICTGSDDA-----TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD--------------GSVHMVNI 265 (288)
Q Consensus 205 ~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~ 265 (288)
.++.|+.++ .+.+||+.+.+ ...+...+........+.+ ++.+++.|+.+ ..+.+||+
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 275 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDNK-WAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNE 275 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET
T ss_pred EEEEeccCCCCccceEEEEECCCCe-EEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecC
Confidence 777777654 58899998764 3333322212222222222 56777777653 24788999
Q ss_pred CCCcEEEE
Q 023018 266 TTGKVCCL 273 (288)
Q Consensus 266 ~t~~~~~~ 273 (288)
.+.+-...
T Consensus 276 ~~~~W~~~ 283 (315)
T 4asc_A 276 EEKKWEGV 283 (315)
T ss_dssp TTTEEEEE
T ss_pred CCChhhhh
Confidence 88754443
No 314
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.00024 Score=57.66 Aligned_cols=191 Identities=13% Similarity=0.060 Sum_probs=111.1
Q ss_pred cEEEEEeCCCeEEEEEccCCeeeEeeccc-cCcEEEEEEe--cCCCEEEEE--eCCCeEEEEeCCCCceeEEecc----C
Q 023018 78 TLVATGGGDDKGFFWRINQGDWASEIQGH-KDSVSSLAFS--MDGQLLASG--GLDGLVQIWDPSSGNLKCTLEG----P 148 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~i~~~~~~--~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~----~ 148 (288)
.+++.++.||.|+-.|..+|+.+-.+... ..++....-. +.+..++.+ +.||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999988888743 1232221110 112234433 5899999999988855544332 1
Q ss_pred CCCEEE---EEE-c----CCCCEEEEecCCCeEEEEECCcccEEEEeeccCC--C-----eEEEEEc-----CCCCEEEE
Q 023018 149 GGGVEW---VSW-H----PRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS--S-----VTCGDFT-----PDGKTICT 208 (288)
Q Consensus 149 ~~~i~~---~~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~-----i~~~~~~-----p~~~~l~~ 208 (288)
.+++.. ... . ..+..+++|+.+|.+...|+++|+.+..+..... . ..|.... ..+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 222321 000 0 1356889999999999999999999988864321 0 1111111 12456777
Q ss_pred EeCCCeEEEEeCCCCceeEEEc-----CCCccccCeE-EEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE
Q 023018 209 GSDDATLRVWNPKSGENIHVIR-----GHPYHTEGLT-CLTISADSTLALSGSKDGSVHMVNITTGKVCC 272 (288)
Q Consensus 209 ~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~ 272 (288)
+..+..+.+.+ ++|+ +..+. ... ....+. .-..+.++.+ +.++.||.|+.+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~-~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNV-LDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCT-TTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccc-cccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777777777 4553 21111 000 000000 0001124555 457889999999999999876
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.74 E-value=0.0015 Score=52.21 Aligned_cols=187 Identities=19% Similarity=0.298 Sum_probs=97.6
Q ss_pred CcEEEEEeCC----CeEEEEEccCCeeeEe--eccccCcEEEEEEecCCCEEEEEeCC-----CeEEEEeCCCCceeEE-
Q 023018 77 ATLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGNLKCT- 144 (288)
Q Consensus 77 ~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~- 144 (288)
+.+++.|+.+ ..+.+||+.+.+.... +...... .+++. -++..++.|+.+ ..+.+||..+.+....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4456666643 3588889887764432 1111111 12222 256667777644 3588899887754332
Q ss_pred -eccCCCCEEEEEEcCCCCEEEEecCCC-----eEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCEEEEEeCC----
Q 023018 145 -LEGPGGGVEWVSWHPRGHIVLAGSEDS-----TVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSDD---- 212 (288)
Q Consensus 145 -~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~~~~d---- 212 (288)
+.........+.+ ++.+++.|+.++ .+.+||+.+.+-.. .+.........+.+ ++..++.|+.+
T Consensus 94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTT
T ss_pred CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCC
Confidence 2222222233333 567777777553 57888987654222 22211111222222 45566666532
Q ss_pred ---CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEEE
Q 023018 213 ---ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVCC 272 (288)
Q Consensus 213 ---g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~~ 272 (288)
..+.+||+.+.+- ..+...+........+.+ ++.+++.|+.+ ..+.+||+.+++-..
T Consensus 170 ~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 170 QCLSTVECYNATTNEW-TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred ccccEEEEEeCCCCcE-EECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 3588999987643 333322211122222222 56777777654 369999998875443
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.66 E-value=0.0012 Score=52.85 Aligned_cols=188 Identities=14% Similarity=0.170 Sum_probs=100.1
Q ss_pred CCcEEEEEeC----C-----CeEEEEEccCCeeeEee--ccccCcEEEEEEecCCCEEEEEeCC-----CeEEEEeCCCC
Q 023018 76 DATLVATGGG----D-----DKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSG 139 (288)
Q Consensus 76 ~~~~l~~~~~----d-----g~i~iw~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 139 (288)
++.+++.|+. + ..+.+||+.+.+....- .........+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4566666665 2 35888898876644332 111111122222 56666666533 46888998876
Q ss_pred ceeEE--eccCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCEEEEEe
Q 023018 140 NLKCT--LEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 140 ~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
+.... +.........+.+ ++.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++..++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 54332 2222222233333 56777777654 458899987654222 11111112223333 556667776
Q ss_pred CC-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEEE
Q 023018 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVCC 272 (288)
Q Consensus 211 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~~ 272 (288)
.+ ..+.+||+.+.+ ...+...+........+.+ ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 224 ~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETET-WTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp BCSSSBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred CCCCCccceEEEEeCCCCc-EEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 54 468999998754 2333322211122222222 56777777643 468899998875443
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.65 E-value=0.0036 Score=50.13 Aligned_cols=188 Identities=16% Similarity=0.225 Sum_probs=99.5
Q ss_pred CCcEEEEEeCC----CeEEEEEccCCeeeEe--eccccCcEEEEEEecCCCEEEEEeC----C-----CeEEEEeCCCCc
Q 023018 76 DATLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGL----D-----GLVQIWDPSSGN 140 (288)
Q Consensus 76 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~----d-----g~i~i~d~~~~~ 140 (288)
++.+++.|+.. ..+.+||..+.+.... +....... +++. .++.+++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 55677777632 3688999887765433 11111111 2222 25666666664 2 468889988775
Q ss_pred eeEE--eccCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCEEEEEeC
Q 023018 141 LKCT--LEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 141 ~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++..++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 3332 2222222333333 56777777643 468899987754222 12111112222223 4566666665
Q ss_pred C-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEEE
Q 023018 212 D-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVCC 272 (288)
Q Consensus 212 d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~~ 272 (288)
+ ..+.+||+.+.+- ..+...+.....-..+.+ ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 178 ~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp CSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 4 4588999876542 233222211222222333 56777777654 569999998865443
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.62 E-value=0.002 Score=61.21 Aligned_cols=199 Identities=14% Similarity=0.151 Sum_probs=122.6
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCC-ceeEEeccC
Q 023018 70 VACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG-NLKCTLEGP 148 (288)
Q Consensus 70 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~ 148 (288)
.-.+| ..+++|.-. ..++.|+++.+.+.+..+.- ..+|.-=.|-... .|+..+ +..|+.|++... .+.+.|..|
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hccCC-CcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 34677 556666654 58899999999887777763 4466666675443 344433 467999999642 333334333
Q ss_pred ----CCCEEEEEEcCCCCEEEEec-------CCCeEEEEECCcccEEEEeeccCCCeEEEEEc--CCCC-EEEEEeC---
Q 023018 149 ----GGGVEWVSWHPRGHIVLAGS-------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFT--PDGK-TICTGSD--- 211 (288)
Q Consensus 149 ----~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--p~~~-~l~~~~~--- 211 (288)
...|..-..+++.++++..+ -.|.+.+|..+.+. .+.+.+|.+....+... +... .++.+..
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34566677788888777543 34788999886543 34455565544333332 1112 2222222
Q ss_pred CCeEEEEeCCCC---cee------EEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 212 DATLRVWNPKSG---ENI------HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 212 dg~i~i~d~~~~---~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+.++|.++... .+. ..+...........++..++...+++..+.-|.|++||+.||.++..-
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence 368888887432 111 111111122344567888887778888899999999999999887654
No 319
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.61 E-value=0.0048 Score=49.58 Aligned_cols=189 Identities=15% Similarity=0.225 Sum_probs=97.3
Q ss_pred CCcEEEEEeC----CC-------eEEEEEccCCeeeEe--eccccCcEEEEEEecCCCEEEEEeCC-------CeEEEEe
Q 023018 76 DATLVATGGG----DD-------KGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-------GLVQIWD 135 (288)
Q Consensus 76 ~~~~l~~~~~----dg-------~i~iw~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~i~d 135 (288)
++.+++.|+. ++ .+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEe
Confidence 5667777773 12 177788877665432 2211111122222 56666777643 3578889
Q ss_pred CCCCceeEEeccC--CCCEEEEEEcCCCCEEEEecC------CCeEEEEECCcccEEE--EeeccCCCeEEEEEcCCCCE
Q 023018 136 PSSGNLKCTLEGP--GGGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 136 ~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~p~~~~ 205 (288)
+.+.+....-..+ ......+. .++++++.|+. -..+.+||+.+.+-.. .+.........+.+ ++..
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 209 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKI 209 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEE
T ss_pred CCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEE
Confidence 8877544322111 11122222 35677777764 2458999988764222 22111111222222 4566
Q ss_pred EEEEeCC-----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC--------------CcEEEEEcC
Q 023018 206 ICTGSDD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD--------------GSVHMVNIT 266 (288)
Q Consensus 206 l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~ 266 (288)
++.|+.+ ..+.+||+.+.+- ..+...+........+. -++.+++.|+.+ ..+.+||+.
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNKW-EVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCCE-EECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEEcCcCCCCccceEEEEECCCCeE-EECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 6777643 3577899887642 33332221111222222 256677776643 468899999
Q ss_pred CCcEEEE
Q 023018 267 TGKVCCL 273 (288)
Q Consensus 267 t~~~~~~ 273 (288)
+.+-...
T Consensus 287 ~~~W~~~ 293 (318)
T 2woz_A 287 KKEWAGM 293 (318)
T ss_dssp TTEEEEE
T ss_pred CCEehhh
Confidence 8765444
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.57 E-value=0.0029 Score=51.75 Aligned_cols=193 Identities=15% Similarity=0.165 Sum_probs=96.0
Q ss_pred CCcEEEEEeC-C---------CeEEEEEccCCeeeEeeccc---cCcEEEEEEecCCCEEEEEeCC--------------
Q 023018 76 DATLVATGGG-D---------DKGFFWRINQGDWASEIQGH---KDSVSSLAFSMDGQLLASGGLD-------------- 128 (288)
Q Consensus 76 ~~~~l~~~~~-d---------g~i~iw~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d-------------- 128 (288)
++.+++.|+. + ..+.+||+.+.+....-... .....++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 4566666665 2 46889998887654432211 11222222 467777787754
Q ss_pred -------------------------CeEEEEeCCCCceeEEeccC--CCCEEEEEEcCCCCEEEEecC------CCeEEE
Q 023018 129 -------------------------GLVQIWDPSSGNLKCTLEGP--GGGVEWVSWHPRGHIVLAGSE------DSTVWM 175 (288)
Q Consensus 129 -------------------------g~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~------dg~i~i 175 (288)
..+.+||+.+.+....-..+ ...-.+++.. ++++++.|+. ...+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEE
Confidence 57899999887544332211 1110222222 5667777764 345777
Q ss_pred EEC--Cccc--EEEEeeccCCCeEEEEEcCCCCEEEEEeCC----------------------CeEEEEeCCCCceeEEE
Q 023018 176 WNA--DRAA--YLNMFSGHGSSVTCGDFTPDGKTICTGSDD----------------------ATLRVWNPKSGENIHVI 229 (288)
Q Consensus 176 ~d~--~~~~--~~~~~~~~~~~i~~~~~~p~~~~l~~~~~d----------------------g~i~i~d~~~~~~~~~~ 229 (288)
||+ .+.+ .+..+..........+...++..++.|+.+ ..+.+||+.+.+-. .+
T Consensus 222 ~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~-~~ 300 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD-KS 300 (357)
T ss_dssp EECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE-EE
T ss_pred EEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee-eC
Confidence 876 3332 222221111111111122245666666632 24778998865432 22
Q ss_pred cCCCccccCeEEEEEcCCCCEEEEEeCCC------cEEEEEcCCCcEEEEe
Q 023018 230 RGHPYHTEGLTCLTISADSTLALSGSKDG------SVHMVNITTGKVCCLN 274 (288)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~iwd~~t~~~~~~~ 274 (288)
...+.....-.++ ..++++++.|+.++ .|.++++.+++.+...
T Consensus 301 ~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 301 GELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 2211111222222 23677888887543 4777799998877654
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.56 E-value=0.019 Score=54.47 Aligned_cols=174 Identities=17% Similarity=0.168 Sum_probs=101.5
Q ss_pred eEEEEEccCCeeeEeecc-ccCcEEEEEEe---cC-CCEEEEEe----------CCCeEEEEeCCCCceeEEec-cCCCC
Q 023018 88 KGFFWRINQGDWASEIQG-HKDSVSSLAFS---MD-GQLLASGG----------LDGLVQIWDPSSGNLKCTLE-GPGGG 151 (288)
Q Consensus 88 ~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~---~~-~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~-~~~~~ 151 (288)
.|++.|..+.+.+..+.- ....+.+++.. .+ ..+|++|+ ..|.|++|++..++...... ...++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 366666666665544432 22344555432 22 35888886 35889999987554322221 24567
Q ss_pred EEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEE--eCCCCceeEEE
Q 023018 152 VEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVW--NPKSGENIHVI 229 (288)
Q Consensus 152 i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~--d~~~~~~~~~~ 229 (288)
+++++-- +| +|++|-. ..|++|++...+.+..-..+-..+..+.....++++++|..-..|.++ +...++ +..+
T Consensus 888 v~al~~~-~g-~Lla~ig-~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~~ 963 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASIN-STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-FEEI 963 (1158)
T ss_dssp EEEEEEE-TT-EEEEEET-TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-EEEE
T ss_pred CEEEeee-CC-EEEEEcC-CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-EEEE
Confidence 8888754 35 4444443 789999997665433111111113222333357899999877766654 444333 3333
Q ss_pred cCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 230 RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
.. ......++++.+-.++ .++.+..+|.|.++....
T Consensus 964 a~-D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 AR-DFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EE-CCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred Ee-ecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 32 2256678888886554 667788999999987754
No 322
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.53 E-value=0.021 Score=46.69 Aligned_cols=153 Identities=14% Similarity=0.082 Sum_probs=91.4
Q ss_pred cEEEEEEecCCCEEEEE------------eCCCeEEEEeCCCC--ceeE-Eecc-----CCCCEEEEEEcC--CCC-EEE
Q 023018 109 SVSSLAFSMDGQLLASG------------GLDGLVQIWDPSSG--NLKC-TLEG-----PGGGVEWVSWHP--RGH-IVL 165 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~------------~~dg~i~i~d~~~~--~~~~-~~~~-----~~~~i~~~~~~~--~~~-~l~ 165 (288)
..-++...|+|..++++ ..+|.|.++|+.+. +... .+.+ .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34567778877554444 16899999998742 2211 1222 123577777765 343 344
Q ss_pred Ee-cC--CCeEEEEECCcc----cEEEEeecc-CCCeEEEEEcCCCCEEEEEe-----------------CCCeEEEEeC
Q 023018 166 AG-SE--DSTVWMWNADRA----AYLNMFSGH-GSSVTCGDFTPDGKTICTGS-----------------DDATLRVWNP 220 (288)
Q Consensus 166 ~~-~~--dg~i~i~d~~~~----~~~~~~~~~-~~~i~~~~~~p~~~~l~~~~-----------------~dg~i~i~d~ 220 (288)
++ .. +.+|.+|++... ..+..+.+. -...+.+.+.++|.+.++.. ..|.|+-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 43 22 467778776542 122333321 23578999999998777654 1255666665
Q ss_pred CCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCC
Q 023018 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITT 267 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~t 267 (288)
. +. ..+.. .-...+.++|+||++.|+.+. ..+.|+.|++..
T Consensus 211 ~--~~-~~~~~---~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 211 N--DV-RVVAE---GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T--CC-EEEEE---EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C--eE-EEeec---CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 3 22 22221 335578999999998777664 578999999863
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.48 E-value=0.0083 Score=48.12 Aligned_cols=184 Identities=11% Similarity=0.100 Sum_probs=96.4
Q ss_pred EEEEEeCCCeEEEEEccCCeeeEe-eccccCcEEEEEEecCCCEEEEEeC-----C------CeEEEEeCCCCceeEE--
Q 023018 79 LVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGL-----D------GLVQIWDPSSGNLKCT-- 144 (288)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~-----d------g~i~i~d~~~~~~~~~-- 144 (288)
+++.|+ ..+.+||..+.+.... +..............++..++.|+. . ..+.+||..+++....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 455555 5799999998876431 2111122223333456777777773 1 1277889887754322
Q ss_pred eccCCCCEEEEEEcCCCCEEEEecCC--------CeEEEEECCcccE--EEEeeccCCCeEEEEEcCCCCEEEEEeC-C-
Q 023018 145 LEGPGGGVEWVSWHPRGHIVLAGSED--------STVWMWNADRAAY--LNMFSGHGSSVTCGDFTPDGKTICTGSD-D- 212 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~p~~~~l~~~~~-d- 212 (288)
+.........+.+ ++.+++.|+.+ ..+.+||+.+.+- +..+.........+. -++..++.|+. +
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSD 160 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTT
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCC
Confidence 1111111222222 56677777732 4589999887542 222211111122222 24556666665 2
Q ss_pred ----CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCcEE
Q 023018 213 ----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-----SVHMVNITTGKVC 271 (288)
Q Consensus 213 ----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~t~~~~ 271 (288)
..+.+||+.+.+- ..+...+.....-..+.+ ++.+++.|+.++ .+.+||+.+.+-.
T Consensus 161 ~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp SCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCCeE-EECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 3689999887542 233322111111222222 567777777654 5889999886433
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.46 E-value=0.01 Score=53.38 Aligned_cols=195 Identities=13% Similarity=0.160 Sum_probs=105.9
Q ss_pred CCcEEEEEeCC----CeEEEEEccCCeeeEee-c------cccCcEEEEEEec-CCCEEEEEeCC------CeEEEEeCC
Q 023018 76 DATLVATGGGD----DKGFFWRINQGDWASEI-Q------GHKDSVSSLAFSM-DGQLLASGGLD------GLVQIWDPS 137 (288)
Q Consensus 76 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~------~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~ 137 (288)
++.+++.|+.+ ..+.+||..+.+....- . .....-.+++..+ ++..++.|+.+ ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 56677777753 45888998877654433 1 1111112333333 66677777643 357889988
Q ss_pred CCceeEE--eccCCCCEEEEEEcCCCCEEEEecCCC--eEEEEECCcccEEEEe-----eccCCCeEEEEEcCC-CCEEE
Q 023018 138 SGNLKCT--LEGPGGGVEWVSWHPRGHIVLAGSEDS--TVWMWNADRAAYLNMF-----SGHGSSVTCGDFTPD-GKTIC 207 (288)
Q Consensus 138 ~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~p~-~~~l~ 207 (288)
+.+.... +........ ++.-.++.+++.|+.++ .+.+||+.+..-...- ........++.+... +..++
T Consensus 477 t~~W~~~~~~p~~R~~h~-~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHS-ACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTEEEECCCCSBCCBSCE-EEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCcEEECCCCCCCcccce-EEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 7654332 222222222 23323788888887654 6999999876432211 111122233455554 55666
Q ss_pred EEeC--C-----CeEEEEeCCCCce-----eEEEcCCCccccCeEEEEEcCCCCEEEEEeC--------CCcEEEEEcCC
Q 023018 208 TGSD--D-----ATLRVWNPKSGEN-----IHVIRGHPYHTEGLTCLTISADSTLALSGSK--------DGSVHMVNITT 267 (288)
Q Consensus 208 ~~~~--d-----g~i~i~d~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~iwd~~t 267 (288)
.|+. + ..+.+||+.+..- ...+...+.....-.+++...++.+++.|+. ...|.+||+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 7765 2 3588999987761 2333221101111122333333677777764 34699999998
Q ss_pred CcEE
Q 023018 268 GKVC 271 (288)
Q Consensus 268 ~~~~ 271 (288)
.+-.
T Consensus 636 ~~W~ 639 (695)
T 2zwa_A 636 ETLT 639 (695)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7644
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.40 E-value=0.0079 Score=45.28 Aligned_cols=142 Identities=15% Similarity=0.147 Sum_probs=81.8
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeee------Eeec--cccCcEEEEEEecCCCEEEEEeCCCeEEEEeC
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA------SEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~------~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (288)
..++.++|+| ++.+.++ .+|.++-.+..+.... ..+- +-. ...++.|.|+|.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 3677999999 7777766 5687666555442111 1110 111 1367889999987777 5699988876
Q ss_pred CCCceeE------Ee-ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCccc------EEEEee-ccCCCeEEEEEcCC
Q 023018 137 SSGNLKC------TL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA------YLNMFS-GHGSSVTCGDFTPD 202 (288)
Q Consensus 137 ~~~~~~~------~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~-~~~~~i~~~~~~p~ 202 (288)
.+..... .+ ...-..+..|.+.|+|.+.++. ++.++-....+.. ....+- ..-...+-+.|.|+
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 4322111 11 1122458999999999888777 6776544332111 011111 12223445668888
Q ss_pred CCEEEEEeCCCeEE
Q 023018 203 GKTICTGSDDATLR 216 (288)
Q Consensus 203 ~~~l~~~~~dg~i~ 216 (288)
+...++. +|.++
T Consensus 193 G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 193 GTLFGVQ--GGKFY 204 (236)
T ss_dssp SCEEEEE--TTEEE
T ss_pred CcEEEEe--CCeEE
Confidence 8776665 66443
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.37 E-value=0.041 Score=44.94 Aligned_cols=185 Identities=16% Similarity=0.146 Sum_probs=96.7
Q ss_pred CCCEEEEEEcCC---CCcEEEEEeCC-----CeEEEEEccCCe-----ee-Eeec---cccCcEEEEEEecCCCEEEEEe
Q 023018 64 SDEVYSVACSPT---DATLVATGGGD-----DKGFFWRINQGD-----WA-SEIQ---GHKDSVSSLAFSMDGQLLASGG 126 (288)
Q Consensus 64 ~~~v~~~~~~~~---~~~~l~~~~~d-----g~i~iw~~~~~~-----~~-~~~~---~~~~~i~~~~~~~~~~~l~~~~ 126 (288)
......|+|+|+ ++.+.++-... +.|..++..... .+ ..+. ........++|.|+|.++++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 346789999994 35555444432 567788876431 11 1132 1111235799999997555533
Q ss_pred C-------------CCeEEEEeCCCC------------ceeEEeccCCCCEEEEEEcC-CCCEEEEecCCCe--------
Q 023018 127 L-------------DGLVQIWDPSSG------------NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDST-------- 172 (288)
Q Consensus 127 ~-------------dg~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~-------- 172 (288)
. .|.|.-++.... .....+.........++|+| .+.++++-.....
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 2 256666665420 01111111112367789999 6665555433332
Q ss_pred EEEEECCccc------------------EEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce------eEE
Q 023018 173 VWMWNADRAA------------------YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN------IHV 228 (288)
Q Consensus 173 i~i~d~~~~~------------------~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~------~~~ 228 (288)
|.+. ..+. ++..+. +......++| .+|..+++....+.|...++..... ...
T Consensus 234 i~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~ 309 (352)
T 2ism_A 234 VNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVET 309 (352)
T ss_dssp EEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEe--ccCCcCCCCcccCCCCCCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchhe
Confidence 3332 2221 222222 2234566777 3565555555566777777653321 112
Q ss_pred EcCCCccccCeEEEEEcCCCCEEEEEe
Q 023018 229 IRGHPYHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 229 ~~~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
+.. ....+..+++.|+|.++++..
T Consensus 310 ~~~---~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 310 ALS---GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEE---SSCCEEEEEECTTSCEEEEEC
T ss_pred ecc---cCCCeeEEEECCCCcEEEEEe
Confidence 211 235688999999998776654
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.21 E-value=0.027 Score=45.17 Aligned_cols=184 Identities=13% Similarity=0.148 Sum_probs=93.6
Q ss_pred EEEEEeCCCeEEEEEccCCeeeEe-eccccCcEEEEEEecCCCEEEEEeC----CC-------eEEEEeCCCCceeEE--
Q 023018 79 LVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGL----DG-------LVQIWDPSSGNLKCT-- 144 (288)
Q Consensus 79 ~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~-- 144 (288)
+++.|+. .+.+||..+.+.... +..............++..++.|+. ++ .+.+||..+.+....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4445553 488999988776542 1111112222233456777777773 12 277888877654332
Q ss_pred eccCCCCEEEEEEcCCCCEEEEecCC-------CeEEEEECCcccEEEE--eeccCCCeEEEEEcCCCCEEEEEeC----
Q 023018 145 LEGPGGGVEWVSWHPRGHIVLAGSED-------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD---- 211 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~~~~~---- 211 (288)
+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-... +.........+. .++..++.|+.
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDK 171 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCC
Confidence 2222222222333 56777777753 3588889877543221 111111111222 25556666653
Q ss_pred --CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEE
Q 023018 212 --DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVC 271 (288)
Q Consensus 212 --dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~t~~~~ 271 (288)
-..+.+||+.+.+- ..+...+........+.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 172 ~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp CBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CccceEEEEcCCCCEE-EECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 23589999987643 333322211111222222 56777777643 35788998886543
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.0072 Score=48.99 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=74.9
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEeccC-CCCEEEEEEc--C-CCCEEEEe-cCCCeEEEEECCcccEEEEeec----c
Q 023018 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGP-GGGVEWVSWH--P-RGHIVLAG-SEDSTVWMWNADRAAYLNMFSG----H 190 (288)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~--~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~----~ 190 (288)
..+++++.||.|+-+|..+|+.+..+... ..++....-. + ++..++.. +.||.|+.++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 37889999999999999999999888754 1222221111 1 22334443 6899999999988855544432 2
Q ss_pred CCCeEE---EEE-c----CCCCEEEEEeCCCeEEEEeCCCCceeEEEcC
Q 023018 191 GSSVTC---GDF-T----PDGKTICTGSDDATLRVWNPKSGENIHVIRG 231 (288)
Q Consensus 191 ~~~i~~---~~~-~----p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 231 (288)
.+++.. ... . ..+..+++|+.+|.+...|+++|+.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 223321 000 0 1356789999999999999999999998874
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.17 E-value=0.088 Score=44.65 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=60.1
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeE--Eecc------CCCCEEEEEEcCC---CCEEEEecC--------
Q 023018 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC--TLEG------PGGGVEWVSWHPR---GHIVLAGSE-------- 169 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~------~~~~i~~~~~~~~---~~~l~~~~~-------- 169 (288)
..+.|+|.|+|+++++-...+.|++++..+++... .+.. ....+..|+|+|+ +..|+++..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45789999999866665444578888765554322 2221 2456789999995 444444432
Q ss_pred -----CCeEEEEECCcc-------cEEE-Eeec-cCCCeEEEEEcCCCCEEEEEe
Q 023018 170 -----DSTVWMWNADRA-------AYLN-MFSG-HGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 170 -----dg~i~i~d~~~~-------~~~~-~~~~-~~~~i~~~~~~p~~~~l~~~~ 210 (288)
...|.-|++... +.+. .+.. .......|+|.|+|.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666654321 1111 1221 123468999999998766654
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.16 E-value=0.074 Score=43.48 Aligned_cols=215 Identities=11% Similarity=0.068 Sum_probs=116.9
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-eeEeec---cccCcEEEEEEecC---CCEEEEEeC----C----
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-WASEIQ---GHKDSVSSLAFSMD---GQLLASGGL----D---- 128 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~---~~~~~i~~~~~~~~---~~~l~~~~~----d---- 128 (288)
-..-..++|.| ++.++++ ...|.|++++ .+++ .+..+. ........|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~p-dG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLG-GGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEE-TTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcC-CCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45578999999 6665554 5569999987 3444 222221 12346789999997 445554432 2
Q ss_pred CeEEEEeCCCC--c-----ee-EEecc-CCCCEEEEEEcCCCCEEEEecC-------------CCeEEEEECCccc----
Q 023018 129 GLVQIWDPSSG--N-----LK-CTLEG-PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRAA---- 182 (288)
Q Consensus 129 g~i~i~d~~~~--~-----~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~---- 182 (288)
..|..|+.... . .+ ..+.. .......++|.|+|.++++.+. .|.|.-++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 56777776543 1 11 11221 1113467999999987776432 2456666653210
Q ss_pred ---EEEEe-eccCCCeEEEEEcC-CCCEEEEEeCCC---eEEEEeCCC--------C--------ceeEEEcCCCccccC
Q 023018 183 ---YLNMF-SGHGSSVTCGDFTP-DGKTICTGSDDA---TLRVWNPKS--------G--------ENIHVIRGHPYHTEG 238 (288)
Q Consensus 183 ---~~~~~-~~~~~~i~~~~~~p-~~~~l~~~~~dg---~i~i~d~~~--------~--------~~~~~~~~~~~~~~~ 238 (288)
....+ .++ .....++|+| .+.++++-.... .|.+...-. + .++..+.. ....
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~---~~~a 260 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGS---ETWA 260 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT---CCCC
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCC---CCcC
Confidence 01111 123 2346789999 555444432221 244332110 0 11112210 2245
Q ss_pred eEEEEEc-------CCCCEEEEEeCCCcEEEEEcCCC-cEE--EEe-----cceEEEEEeec
Q 023018 239 LTCLTIS-------ADSTLALSGSKDGSVHMVNITTG-KVC--CLN-----FQYTCVAYDLD 285 (288)
Q Consensus 239 v~~~~~~-------~~~~~l~~~~~dg~i~iwd~~t~-~~~--~~~-----~~~~~~~~~~d 285 (288)
...++|. .+|.++++.-..+.|...++... +.. ..+ ..+..+++.||
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD 322 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD 322 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC
Confidence 6778883 46777777667788999998753 332 122 34677777776
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.11 E-value=0.081 Score=43.20 Aligned_cols=215 Identities=11% Similarity=0.073 Sum_probs=114.7
Q ss_pred CCEEEEEEcCCCCc-EEEEEeCCCeEEEEEccCCeeeEe---e----ccccCcEEEEEEecC---CCEEEEEe-C-----
Q 023018 65 DEVYSVACSPTDAT-LVATGGGDDKGFFWRINQGDWASE---I----QGHKDSVSSLAFSMD---GQLLASGG-L----- 127 (288)
Q Consensus 65 ~~v~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~---~----~~~~~~i~~~~~~~~---~~~l~~~~-~----- 127 (288)
..-..|+|.| +++ +++ +...|.|++++.. +..... + .........|+|+|+ +.+|.++. .
T Consensus 18 ~~P~~i~~~p-dG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECS-TTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcC-CCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 4568999999 666 554 4567999998853 332111 1 112345689999995 44444442 2
Q ss_pred --CCeEEEEeCCCC--c--eeE-Eecc------CCCCEEEEEEcCCCCEEEEecC-------------CCeEEEEECCcc
Q 023018 128 --DGLVQIWDPSSG--N--LKC-TLEG------PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRA 181 (288)
Q Consensus 128 --dg~i~i~d~~~~--~--~~~-~~~~------~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~ 181 (288)
...|..|++... . ... .+.. .......+.|.|+|.++++.+. .|.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235666665432 1 111 1111 1112457999999966655433 246777776432
Q ss_pred c------------EEEEeeccCCCeEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCce----------------------
Q 023018 182 A------------YLNMFSGHGSSVTCGDFTPDGKTICTGSDDA--TLRVWNPKSGEN---------------------- 225 (288)
Q Consensus 182 ~------------~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg--~i~i~d~~~~~~---------------------- 225 (288)
- ....+..--.....++|.|....|+++.... .=.|.-+..+..
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 0 1111221123467899999444455443321 112222222111
Q ss_pred ---------eEEEcCCCccccCeEEEEEcC-------CCCEEEEEeCCCcEEEEEcCCCcEEEE--e-----cceEEEEE
Q 023018 226 ---------IHVIRGHPYHTEGLTCLTISA-------DSTLALSGSKDGSVHMVNITTGKVCCL--N-----FQYTCVAY 282 (288)
Q Consensus 226 ---------~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~dg~i~iwd~~t~~~~~~--~-----~~~~~~~~ 282 (288)
+..+. +...+..+.|.+ ++.++++.-..+.|...++..++.... + ..+..+++
T Consensus 255 ~~~~~~~~P~~~~~----~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK----DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp SSCTTSCCCSEEES----SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred CCCCCccCCeEEeC----CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 11111 123466777763 467777776788899888887654432 1 24667777
Q ss_pred eecc
Q 023018 283 DLDF 286 (288)
Q Consensus 283 ~~df 286 (288)
.||-
T Consensus 331 ~pdG 334 (353)
T 2g8s_A 331 GPDG 334 (353)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7663
No 332
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.11 E-value=0.028 Score=45.99 Aligned_cols=141 Identities=13% Similarity=0.084 Sum_probs=76.5
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE---e----ccCCCCEEEEEEcCC---CCEEEEec-C-------C
Q 023018 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT---L----EGPGGGVEWVSWHPR---GHIVLAGS-E-------D 170 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~----~~~~~~i~~~~~~~~---~~~l~~~~-~-------d 170 (288)
.-..|+|.|++++|+++...|.|++++.. ++.... + .........++++|+ +..|+++. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45789999999834455678999999853 332111 1 122346789999995 44444432 2 2
Q ss_pred CeEEEEECCcc--c--EEEE-eec------cCCCeEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCCc--
Q 023018 171 STVWMWNADRA--A--YLNM-FSG------HGSSVTCGDFTPDGKTICTGSD-------------DATLRVWNPKSGE-- 224 (288)
Q Consensus 171 g~i~i~d~~~~--~--~~~~-~~~------~~~~i~~~~~~p~~~~l~~~~~-------------dg~i~i~d~~~~~-- 224 (288)
..|..|++... . .... +.. .......|.|.|+|.++++.+. .|.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666432 1 1111 111 1112357999999955444332 2467666664220
Q ss_pred ----------eeEEEcCCCccccCeEEEEEcC-CCCEEEE
Q 023018 225 ----------NIHVIRGHPYHTEGLTCLTISA-DSTLALS 253 (288)
Q Consensus 225 ----------~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 253 (288)
....+.. .......++|+| .+.++++
T Consensus 178 ~npf~~~~~~~~~i~a~---G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSY---GIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEE---CCSEEEEEEEETTTTEEEEE
T ss_pred CCCCcCCCCCCccEEEE---cCcCccceEEECCCCCEEEE
Confidence 1111111 123467899999 5655443
No 333
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.05 E-value=0.083 Score=42.12 Aligned_cols=178 Identities=6% Similarity=-0.004 Sum_probs=100.3
Q ss_pred EEEcCCCCcEEEEEeCC-------------CeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEe----CCCeEE
Q 023018 70 VACSPTDATLVATGGGD-------------DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----LDGLVQ 132 (288)
Q Consensus 70 ~~~~~~~~~~l~~~~~d-------------g~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~ 132 (288)
--+++.+..+..+...+ ..|+..++...+... +. ... ...|++++++|+-.. ....|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD--PDP--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE--CSC--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee--cCC--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 34566455455554443 356666766554332 22 122 236778888887665 344566
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCCCCEEEEecC-CCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
..++.... ...+..+.. ..+++.++.|+..+. ...|++.++..+.....+. .... ..+.|++.+|+-...
T Consensus 133 ~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 133 RIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp EEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEG
T ss_pred EEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEc
Confidence 66665433 333433322 345667777776554 6788888887655433332 2222 235698998887664
Q ss_pred C--CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCc
Q 023018 212 D--ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS--KDGSVHMVNITTGK 269 (288)
Q Consensus 212 d--g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~t~~ 269 (288)
. ..|..-++..+. ...+.. ..+ ..|+|++.+|+.+. ..+.|..-++....
T Consensus 204 ~~~~~I~~~~ldG~~-~~~Lt~-----~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 204 NRDNAIVHVNINNPN-PVVLTE-----ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp GGTTEEEEECSSSCC-CEECSC-----SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCcEEEEEECCCCC-eEEEeC-----CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 4 367777776544 344432 223 23777788877653 24567777776543
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.99 E-value=0.027 Score=45.94 Aligned_cols=91 Identities=18% Similarity=0.291 Sum_probs=46.8
Q ss_pred CCcEEEEEeC-CCeEEEEEccC--CeeeE--eec-cccCcEEEEEEecCCCEEEEEeC-C---------CeEEEEeCCCC
Q 023018 76 DATLVATGGG-DDKGFFWRINQ--GDWAS--EIQ-GHKDSVSSLAFSMDGQLLASGGL-D---------GLVQIWDPSSG 139 (288)
Q Consensus 76 ~~~~l~~~~~-dg~i~iw~~~~--~~~~~--~~~-~~~~~i~~~~~~~~~~~l~~~~~-d---------g~i~i~d~~~~ 139 (288)
++.+++.|+. ...+.+||+.+ .+... .+. .......++.+ ++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4566666654 34688888863 33322 222 11111122222 5666666665 2 46889998877
Q ss_pred ceeEEe--c-cCCCCEEEEEEcCCCCEEEEecCC
Q 023018 140 NLKCTL--E-GPGGGVEWVSWHPRGHIVLAGSED 170 (288)
Q Consensus 140 ~~~~~~--~-~~~~~i~~~~~~~~~~~l~~~~~d 170 (288)
+....- . .......++. .++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 543321 1 1222222333 467788888754
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.90 E-value=0.11 Score=41.33 Aligned_cols=163 Identities=7% Similarity=0.021 Sum_probs=92.3
Q ss_pred CCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCC--------------CeEEEEeCCCCceeEEeccCCCC
Q 023018 86 DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD--------------GLVQIWDPSSGNLKCTLEGPGGG 151 (288)
Q Consensus 86 dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~ 151 (288)
++.|+..+..... ...+... . +--+++++.+|+-+... ..|+..++...+...... . .
T Consensus 36 ~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-~--~ 107 (302)
T 3s25_A 36 NGRLYAMNIDGSN-IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-D--P 107 (302)
T ss_dssp TTEEEEEETTSCS-CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-S--C
T ss_pred CceEEEEcCCCCC-CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-C--C
Confidence 4555555544333 3333321 1 33457889888776542 467777777665333222 2 1
Q ss_pred EEEEEEcCCCCEEEEec----CCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCcee
Q 023018 152 VEWVSWHPRGHIVLAGS----EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-DATLRVWNPKSGENI 226 (288)
Q Consensus 152 i~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~-dg~i~i~d~~~~~~~ 226 (288)
...|++.+++|+... ....|+..++.... ...+..+.. ..++|+++.|+-.+. ...|.+.++..+...
T Consensus 108 --~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 108 --CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp --EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred --ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 236677888888765 34556666765433 344443322 346778888876665 568888888766544
Q ss_pred EEEcCCCccccCeEEEEEcCCCCEEEEEeCC--CcEEEEEcCCCcE
Q 023018 227 HVIRGHPYHTEGLTCLTISADSTLALSGSKD--GSVHMVNITTGKV 270 (288)
Q Consensus 227 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~t~~~ 270 (288)
..+.+ ... ..+.|++.+|+-.... ..|..-++..+..
T Consensus 181 ~l~~~------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~ 219 (302)
T 3s25_A 181 LFYDC------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP 219 (302)
T ss_dssp EEECS------CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC
T ss_pred EEeCC------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe
Confidence 33332 111 2355888777765443 3566666665543
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.86 E-value=0.25 Score=44.74 Aligned_cols=193 Identities=11% Similarity=0.158 Sum_probs=115.4
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeE
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 143 (288)
...|.++.... ++ .|..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ -|..|+..+++...
T Consensus 62 ~~~i~~i~~d~-~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 62 NTRIYCGVIID-NT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SSCEEEEEEET-TT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEE
T ss_pred CceEEEEEEcC-CC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEE
Confidence 34688887766 44 455566655 788998776543211112335776654 345 45666655 57888887665432
Q ss_pred Eec----cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEe-ec----cCCCeEEEEEcCCCCEEEEEeCCCe
Q 023018 144 TLE----GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SG----HGSSVTCGDFTPDGKTICTGSDDAT 214 (288)
Q Consensus 144 ~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~----~~~~i~~~~~~p~~~~l~~~~~dg~ 214 (288)
... .....|.++....++.+.+ |+. +-+..++..+++..... .. ....|.++...+++..|..|+. +.
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 211 1234688888887776555 444 45778887665432211 11 1224888888777776666664 46
Q ss_pred EEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 215 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
|..+|..+++.. .+... ....|.++...++|.+.+ |+. +-+.+++..+++.
T Consensus 213 l~~~~~~~~~~~-~~~~l--~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 213 LFQYFPSTGQIK-QTEAF--HNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPL 263 (758)
T ss_dssp EEEEETTTTEEE-EEEEE--EEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCC
T ss_pred CeEEcCCCCeEE-eccCC--CCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcE
Confidence 888998766432 22211 234588888887777655 444 4588888776553
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.86 E-value=0.13 Score=41.30 Aligned_cols=199 Identities=10% Similarity=0.128 Sum_probs=121.4
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC-CeeeEeeccc----cCcEEEEEEecCCCEEEEEeC-------CCeEE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQ-GDWASEIQGH----KDSVSSLAFSMDGQLLASGGL-------DGLVQ 132 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-------dg~i~ 132 (288)
.+|.--.|-. ...|+..+. ..|+-|++.. ..+++.+..| ...|.....+++.++++..+- .|.+.
T Consensus 107 e~VvfWkWis--~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQ 183 (365)
T 2xzh_A 107 DDVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQ 183 (365)
T ss_dssp SCEEEEEECS--SSEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEE
T ss_pred CccEEEEecC--CCeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEE
Confidence 3455555553 334444443 5799999864 4566666554 346777777888887665432 37888
Q ss_pred EEeCCCCceeEEeccCCCCEEEEEEcCC---CCEEEEecC---CCeEEEEECCcc---c------EEEEeec---cCCCe
Q 023018 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPR---GHIVLAGSE---DSTVWMWNADRA---A------YLNMFSG---HGSSV 194 (288)
Q Consensus 133 i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---dg~i~i~d~~~~---~------~~~~~~~---~~~~i 194 (288)
+|..+.+ ..+.+.+|......+....+ ..+++.+.. .+.+.+.++... . .+..+.. ...-.
T Consensus 184 LYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFP 262 (365)
T 2xzh_A 184 LYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 262 (365)
T ss_dssp EEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCE
T ss_pred EEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCce
Confidence 9987654 44556666544333322211 113343332 257888887432 1 1111111 23445
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 195 TCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 195 ~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
.++..++.-..++.-+.-|.|++||+.++.++..-+- ....|...+.+....-+++....|.|.-..+...+.
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI---S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc---CCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 6788888778899999999999999999999877665 445565555554444555566788877777765543
No 338
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.65 E-value=0.11 Score=41.01 Aligned_cols=197 Identities=15% Similarity=0.117 Sum_probs=99.6
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEe
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (288)
.|..++... . ..++. . ||.|+.|-......+..-..-...|..++.... ..+.-. +|.|+.|-......+...
T Consensus 64 ~i~~ia~G~-~-hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGN-Y-HSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECS-S-EEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCC-C-EEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCC
Confidence 466666653 2 23333 4 788888876542221111112346777766543 333334 899999965543222111
Q ss_pred ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 023018 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN 225 (288)
Q Consensus 146 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~ 225 (288)
......|..++..... .++-. +|.|+.|-......+.........|..++.... ..++. .+|.|+.|-......
T Consensus 137 ~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gq 210 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQ 210 (282)
T ss_dssp GGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTST
T ss_pred ccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCC
Confidence 1123457777665433 22223 699999976542222111112346777766533 22333 599999996543221
Q ss_pred eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecceEEEE
Q 023018 226 IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLNFQYTCVA 281 (288)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~~~~~~~~ 281 (288)
+. +. ......|..++.......++ . +|.|+.|=-....++.....+..++
T Consensus 211 lg-~p--~~~~~~v~~i~~G~~h~~al--~-~g~v~~wG~n~~gq~~v~~~v~~ia 260 (282)
T 3qhy_B 211 TT-VP--TEALSGVSAIASGEWYSLAL--K-NGKVIAWGSSRTAPSSVQSGVSSIE 260 (282)
T ss_dssp TC-CC--GGGGSSCCEEEECSSCEEEE--E-TTEEEEESTTCCCCGGGSSCEEEEE
T ss_pred CC-CC--cccCCCceEEEcCCCEEEEE--E-CCEEEEecCCCCccccCCCCcEEEE
Confidence 11 11 01234566776654433333 3 8899999766544433333444443
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.64 E-value=0.24 Score=41.43 Aligned_cols=188 Identities=10% Similarity=0.138 Sum_probs=119.4
Q ss_pred cEEEEEeCCCeEEEEEccC-CeeeEeeccc----cCcEEEEEEecCCCEEEEEe-------CCCeEEEEeCCCCceeEEe
Q 023018 78 TLVATGGGDDKGFFWRINQ-GDWASEIQGH----KDSVSSLAFSMDGQLLASGG-------LDGLVQIWDPSSGNLKCTL 145 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~ 145 (288)
..|+..+. ..|+-|++.. ..+++.+..| ...|.....+++.++++..+ -.|.+.+|..+.+ ..+.+
T Consensus 117 ~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~i 194 (494)
T 1bpo_A 117 NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPI 194 (494)
T ss_dssp TEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEE
T ss_pred CeEEEEcC-CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchh
Confidence 34444443 5799999864 4566666554 34677777788888776543 2478889987754 44556
Q ss_pred ccCCCCEEEEEEcCCC---CEEEEecC---CCeEEEEECCcc---c------EEEEee---ccCCCeEEEEEcCCCCEEE
Q 023018 146 EGPGGGVEWVSWHPRG---HIVLAGSE---DSTVWMWNADRA---A------YLNMFS---GHGSSVTCGDFTPDGKTIC 207 (288)
Q Consensus 146 ~~~~~~i~~~~~~~~~---~~l~~~~~---dg~i~i~d~~~~---~------~~~~~~---~~~~~i~~~~~~p~~~~l~ 207 (288)
.+|.+....+....+. ..++.+.. .+.+.|.++... . .+..+. ....-..++..++.-..++
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 7776544444332211 23444443 278888888432 1 111111 1234456788888888899
Q ss_pred EEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE
Q 023018 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~ 270 (288)
.-+.-|.|++||+.++.++..-+- ...+|...+......-+++....|.|.-..+...+.
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrI---s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EEecCceEEEEecccceeeeeecc---cCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 999999999999999998877665 445565555555555556666888887777765543
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.56 E-value=0.29 Score=41.45 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=63.6
Q ss_pred eeEeecCCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeee--Eeecc------ccCcEEEEEEecC---CCEEEEE
Q 023018 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA--SEIQG------HKDSVSSLAFSMD---GQLLASG 125 (288)
Q Consensus 57 ~~~~~~h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~------~~~~i~~~~~~~~---~~~l~~~ 125 (288)
+..+...-...+.|+|.| +++++++-...+.|++++..+++.. ..+.. ....+..|+|+|+ +.+|.++
T Consensus 19 ~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 334433344678999999 6777766554457888876544432 22221 2456789999995 4455444
Q ss_pred eC-------------CCeEEEEeCCCC-------ceeE-Eecc-CCCCEEEEEEcCCCCEEEEec
Q 023018 126 GL-------------DGLVQIWDPSSG-------NLKC-TLEG-PGGGVEWVSWHPRGHIVLAGS 168 (288)
Q Consensus 126 ~~-------------dg~i~i~d~~~~-------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~ 168 (288)
.. ...|.-|+.... +.+. .+.. .......|+|.|+|.++++.+
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 32 124555554322 1111 1221 123478999999998777654
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.51 E-value=0.25 Score=40.10 Aligned_cols=143 Identities=17% Similarity=0.125 Sum_probs=80.8
Q ss_pred CcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEE--e----ccCCCCEEEEEEcCC---CCEEEEe---cCCCeEEE
Q 023018 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT--L----EGPGGGVEWVSWHPR---GHIVLAG---SEDSTVWM 175 (288)
Q Consensus 108 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~----~~~~~~i~~~~~~~~---~~~l~~~---~~dg~i~i 175 (288)
..-+.|+|.|+|+++++--..|.|++++...++.... + .........|+++|+ +..|++. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3457899999998766655489999998765553221 2 123457899999995 3344432 23456666
Q ss_pred EECCcc----------cEE-EEeec-cCCCeEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCCc------
Q 023018 176 WNADRA----------AYL-NMFSG-HGSSVTCGDFTPDGKTICTGSD-------------DATLRVWNPKSGE------ 224 (288)
Q Consensus 176 ~d~~~~----------~~~-~~~~~-~~~~i~~~~~~p~~~~l~~~~~-------------dg~i~i~d~~~~~------ 224 (288)
|.+..+ +.+ ..+.. .......|.|.|+|.++++.+. .|.|.-++....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 665431 111 11211 1123457899999977666442 3455555543210
Q ss_pred -eeEEEcCCCccccCeEEEEEcCCCCEEEE
Q 023018 225 -NIHVIRGHPYHTEGLTCLTISADSTLALS 253 (288)
Q Consensus 225 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 253 (288)
....+.. .......++|+|+|.+.++
T Consensus 192 ~~~~i~a~---G~RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 192 PGSPVYSY---GHRNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TTCCEEEB---CCSBCCEEEECTTCCEEEE
T ss_pred CCCeEEee---CCCCcceEEECCCCCEEEE
Confidence 0011111 1233567899998776554
No 342
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.45 E-value=0.28 Score=40.01 Aligned_cols=189 Identities=15% Similarity=0.101 Sum_probs=100.3
Q ss_pred CCCEEEEEEcCC---CCcEEEEEeC---C----CeEEEEEccCC-------eee-Eeecc-ccCcEEEEEEecCCCEEEE
Q 023018 64 SDEVYSVACSPT---DATLVATGGG---D----DKGFFWRINQG-------DWA-SEIQG-HKDSVSSLAFSMDGQLLAS 124 (288)
Q Consensus 64 ~~~v~~~~~~~~---~~~~l~~~~~---d----g~i~iw~~~~~-------~~~-~~~~~-~~~~i~~~~~~~~~~~l~~ 124 (288)
......|+++|+ ++.++++-+. + ..|..|+.... +.+ ..+.. .......++|.|+|.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 345889999994 3555544332 3 56777776543 111 11221 1112357899999986655
Q ss_pred EeC-------------CCeEEEEeCCCC--------ceeEEeccCCCCEEEEEEcC-CCCEEEEecCCC---eEEEEECC
Q 023018 125 GGL-------------DGLVQIWDPSSG--------NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDS---TVWMWNAD 179 (288)
Q Consensus 125 ~~~-------------dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~i~d~~ 179 (288)
.+. .|.|.-++.... .......++ .....++|+| .+.++++-.... .|.+....
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G 230 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG 230 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC
Confidence 432 245655554321 011111222 2356799999 666555543322 23333211
Q ss_pred c----------------ccEEEEeeccCCCeEEEEEc-------CCCCEEEEEeCCCeEEEEeCCCC-cee--EEEcCCC
Q 023018 180 R----------------AAYLNMFSGHGSSVTCGDFT-------PDGKTICTGSDDATLRVWNPKSG-ENI--HVIRGHP 233 (288)
Q Consensus 180 ~----------------~~~~~~~~~~~~~i~~~~~~-------p~~~~l~~~~~dg~i~i~d~~~~-~~~--~~~~~~~ 233 (288)
. ..++..+.........++|. .+|.++++....+.|...++... ... ..+...
T Consensus 231 ~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~- 309 (354)
T 3a9g_A 231 GNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN- 309 (354)
T ss_dssp CBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT-
T ss_pred CcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC-
Confidence 0 01222221123456788883 46666666666778888887643 221 222211
Q ss_pred ccccCeEEEEEcCCCCEEEEEe
Q 023018 234 YHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 234 ~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
....+..+++.|+|.++++..
T Consensus 310 -~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 310 -VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp -TSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCeeEEEECCCCcEEEEEe
Confidence 245688999999997766654
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.45 E-value=0.087 Score=47.33 Aligned_cols=149 Identities=13% Similarity=0.191 Sum_probs=80.8
Q ss_pred CCcEEEEEeCC------CeEEEEEccCCeeeEeeccccC-cEEEEEEecCCCEEEEEeCCC--eEEEEeCCCCceeEEe-
Q 023018 76 DATLVATGGGD------DKGFFWRINQGDWASEIQGHKD-SVSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLKCTL- 145 (288)
Q Consensus 76 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~- 145 (288)
++.+++.|+.+ ..+.+||..+.+....-..... .-.+++...++..++.|+.++ .+.+||+.+......-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 44566666643 2477888877654433211111 112233324777888887554 7899999887543321
Q ss_pred ----ccCCCCEEEEEEcCC-CCEEEEecC--C-----CeEEEEECCccc------EEEEee---ccCCCeEEEEEcCCCC
Q 023018 146 ----EGPGGGVEWVSWHPR-GHIVLAGSE--D-----STVWMWNADRAA------YLNMFS---GHGSSVTCGDFTPDGK 204 (288)
Q Consensus 146 ----~~~~~~i~~~~~~~~-~~~l~~~~~--d-----g~i~i~d~~~~~------~~~~~~---~~~~~i~~~~~~p~~~ 204 (288)
........++.+... +++++.|+. + ..+.+||+.+.. -..... ....... +....++.
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~ 609 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRK 609 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCE
Confidence 112222344555654 667777765 2 458899988765 111111 1111122 22333366
Q ss_pred EEEEEeC--------CCeEEEEeCCCCce
Q 023018 205 TICTGSD--------DATLRVWNPKSGEN 225 (288)
Q Consensus 205 ~l~~~~~--------dg~i~i~d~~~~~~ 225 (288)
.++.|+. ...+.+||+.+.+-
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 6777764 34589999987653
No 344
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.34 E-value=0.24 Score=40.23 Aligned_cols=109 Identities=11% Similarity=0.088 Sum_probs=66.7
Q ss_pred eccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccE--EEEe----eccCCCeEEEEEcCC---CCEEEEE-e--CC
Q 023018 145 LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY--LNMF----SGHGSSVTCGDFTPD---GKTICTG-S--DD 212 (288)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~----~~~~~~i~~~~~~p~---~~~l~~~-~--~d 212 (288)
+...-...+.|+|.|+|.++++--..|.|++++...++. +..+ .........|+++|+ ...|++. + .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333445688999999999877776689999998765543 2222 123456889999995 4555543 2 34
Q ss_pred CeEEEEeCCCC----------cee-EEEcCCCccccCeEEEEEcCCCCEEEEEe
Q 023018 213 ATLRVWNPKSG----------ENI-HVIRGHPYHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 213 g~i~i~d~~~~----------~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
+.|.-|.+..+ +.+ ..+.....| ....|.|.|+|.+.++.+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEEC
Confidence 45666655431 111 122221112 345799999998777654
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.32 E-value=0.26 Score=47.51 Aligned_cols=199 Identities=10% Similarity=0.111 Sum_probs=112.5
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccC-CeeeEeeccc----cCcEEEEEEecCCCEEEEEe-------CCCeEEE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQ-GDWASEIQGH----KDSVSSLAFSMDGQLLASGG-------LDGLVQI 133 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~i~i 133 (288)
+|.--.|-. ...|+..+. ..|+-|++.. ..+++.+..| ...|.....+++.++++..+ -.|.+.+
T Consensus 107 ~VvfWkWis--~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL 183 (1630)
T 1xi4_A 107 DVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (1630)
T ss_pred CceEEEecC--CCeeEEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence 444455553 334444333 5799999864 3455555544 45677777788888766543 3488889
Q ss_pred EeCCCCceeEEeccCCCCEEEEEEcC---CCCEEEEecC---CCeEEEEECCcc---cE------EEEeec---cCCCeE
Q 023018 134 WDPSSGNLKCTLEGPGGGVEWVSWHP---RGHIVLAGSE---DSTVWMWNADRA---AY------LNMFSG---HGSSVT 195 (288)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~---dg~i~i~d~~~~---~~------~~~~~~---~~~~i~ 195 (288)
|....+. .+.+.+|.+....+.... ....+..+.. .+.+.|-++... .+ +..+.. ...-..
T Consensus 184 yS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv 262 (1630)
T 1xi4_A 184 YSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 262 (1630)
T ss_pred eeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcce
Confidence 9876543 334455544333333321 1123332222 267888887432 11 111111 123345
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
++..++.-..++.-+.-|.|.+||+.++..+..-+. ...+|...+..+...-+++....|.|.-..+...+.+
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri---s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhhccc---cCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 677788777888889999999999999987765443 3344444444433333444456777766666655444
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.06 E-value=0.37 Score=37.90 Aligned_cols=183 Identities=17% Similarity=0.086 Sum_probs=96.5
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEe
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (288)
.|..++... . ..++. . ||.|+.|-....-.+..-......|..++..... .++. . +|.|+.|-......+-.-
T Consensus 25 ~i~~ia~G~-~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGY-F-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECS-S-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCC-C-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 577777654 2 33333 4 8999999865432221111123456666664332 2333 4 899999975543222111
Q ss_pred ccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q 023018 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN 225 (288)
Q Consensus 146 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~ 225 (288)
......|..++.... +.++-+ +|.|+.|-....-.+.........|..++.... +.+.-. +|.|+.|-......
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCC
Confidence 112346777777644 333334 899999976542212111122345777665433 333334 79999996543221
Q ss_pred eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 226 IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
+. ........|..++...... ++. .+|.|+.|=...
T Consensus 172 lg---~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 172 TT---VPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNR 207 (282)
T ss_dssp TS---CCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCT
T ss_pred CC---CceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCC
Confidence 11 1111234577776654432 233 588999987543
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.94 E-value=0.25 Score=42.60 Aligned_cols=114 Identities=18% Similarity=0.148 Sum_probs=74.5
Q ss_pred CEEEEEEcCCCCEEEEecC-CCeEEEEECCcc------c-------EEEEeeccCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 023018 151 GVEWVSWHPRGHIVLAGSE-DSTVWMWNADRA------A-------YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLR 216 (288)
Q Consensus 151 ~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~------~-------~~~~~~~~~~~i~~~~~~p~~~~l~~~~~dg~i~ 216 (288)
....+..+|+|+++++++. +.++.++|++.. + ...... ........+|.++|.-..+.--|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 3567899999998887765 789999998742 1 122222 344567789999994445555899999
Q ss_pred EEeCCCC----------ceeEEEcCCCccccCeEEEEE------cCCCCEEEEEeC---CC----------cEEEEEcCC
Q 023018 217 VWNPKSG----------ENIHVIRGHPYHTEGLTCLTI------SADSTLALSGSK---DG----------SVHMVNITT 267 (288)
Q Consensus 217 i~d~~~~----------~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~---dg----------~i~iwd~~t 267 (288)
.|++... ..+..+..+ ..+-.+.- .|+|++|++.+. |. .-.++|+..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~----YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVH----YQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECS----SCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred EEeccHHHHHhcCccCCeeeeccccc----cCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 9998643 344445432 23333333 568999988753 44 347888854
Q ss_pred Cc
Q 023018 268 GK 269 (288)
Q Consensus 268 ~~ 269 (288)
.+
T Consensus 479 dk 480 (638)
T 3sbq_A 479 DE 480 (638)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.81 E-value=1 Score=40.70 Aligned_cols=195 Identities=11% Similarity=0.088 Sum_probs=112.7
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee-ccccCcEEEEEEecCCCEEEEEeCCCeEEEEeCCCCcee
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK 142 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 142 (288)
+..|+++.-.. .+ .+..|+.+| |..||-.+.+..... ......|.++....++ .|.+|+.+| +..||..+.+..
T Consensus 21 ~n~V~~I~qD~-~G-~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDS-EG-LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECT-TS-CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECC-CC-CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE
Confidence 46799998876 44 344566667 556663221111000 1123468888777666 566666665 788998776432
Q ss_pred EEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEEEEee-----ccCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 023018 143 CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-----GHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (288)
Q Consensus 143 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~p~~~~l~~~~~dg~i~i 217 (288)
.........|.++... ++ .|..++.+ -+..|+..+++.. .+. .....|.++...+++.+.+ ++.. -|..
T Consensus 96 ~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~ 169 (758)
T 3ott_A 96 QPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCR 169 (758)
T ss_dssp CCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEE
T ss_pred CcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhh
Confidence 2111122347776543 44 56666665 6888998765533 221 1234688888877776554 5544 5788
Q ss_pred EeCCCCceeEEEcCCCc---cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE
Q 023018 218 WNPKSGENIHVIRGHPY---HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVC 271 (288)
Q Consensus 218 ~d~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~ 271 (288)
|+..++.. ..+..... ....|.++...+++..|..|+. +-+..++..+++..
T Consensus 170 ~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~ 224 (758)
T 3ott_A 170 YIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK 224 (758)
T ss_dssp EETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE
T ss_pred CccCCCce-EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE
Confidence 88876543 22321110 1234788888877665555553 45888998877543
No 349
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.43 E-value=1.9 Score=41.14 Aligned_cols=210 Identities=10% Similarity=0.053 Sum_probs=111.1
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEee-ccccCcEEEEEEecC------CCEEEEEeC-CCeEEEEeCC
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMD------GQLLASGGL-DGLVQIWDPS 137 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~------~~~l~~~~~-dg~i~i~d~~ 137 (288)
.|.+.+.+. .+++.++ .+.+.++.+..++..... ..-...|.|+++.|. ++++++|+. |++|+|+.+.
T Consensus 515 ~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCNS---SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEECS---SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeCC---CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 344444432 2444444 577888887765422211 113567999999763 368999996 9999999998
Q ss_pred CCceeEEeccC-CCCEEEEEEcC--CCCEEEEecCCCeEEEEEC--CcccEEEE--eeccCCCeEEEEEcCCCCEEEEEe
Q 023018 138 SGNLKCTLEGP-GGGVEWVSWHP--RGHIVLAGSEDSTVWMWNA--DRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 138 ~~~~~~~~~~~-~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~--~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~~~~ 210 (288)
+.+.+....-. .....++.+.. ...+|.+|-.||.+.-+.+ .++..... ......++.-..+...+..-+.+.
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~ 670 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 670 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEE
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEE
Confidence 77655443321 12344554432 3457889999999865554 34443322 222234555444544444433344
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCccccCe-EEEEEcCC--CCEEEEEeCCCcEEEEEcCCCcEEE--Ee---cceEEEEE
Q 023018 211 DDATLRVWNPKSGENIHVIRGHPYHTEGL-TCLTISAD--STLALSGSKDGSVHMVNITTGKVCC--LN---FQYTCVAY 282 (288)
Q Consensus 211 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~~~~~dg~i~iwd~~t~~~~~--~~---~~~~~~~~ 282 (288)
.+....+|--. +... +... ....+ ....|+.. ..-++..+ ++.++|..+.+-+... .+ ..++.++|
T Consensus 671 s~rp~liy~~~-~~l~--~s~l--~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y 744 (1158)
T 3ei3_A 671 SDRPTVIYSSN-HKLV--FSNV--NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICY 744 (1158)
T ss_dssp SSSCEEEEESS-SSEE--EEEB--SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEE
T ss_pred CCCCEEEEEcC-CceE--Eecc--ChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEE
Confidence 45555555433 3222 1111 11223 23345432 23444443 4568888875432221 11 45666666
Q ss_pred eec
Q 023018 283 DLD 285 (288)
Q Consensus 283 ~~d 285 (288)
.|.
T Consensus 745 ~~~ 747 (1158)
T 3ei3_A 745 QEV 747 (1158)
T ss_dssp EGG
T ss_pred cCC
Confidence 653
No 350
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.86 E-value=1.4 Score=36.32 Aligned_cols=185 Identities=11% Similarity=0.021 Sum_probs=89.3
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCC----eEEEEEccCCeeeEeec------c--------ccCcEEEEEEecC--CCEEE
Q 023018 64 SDEVYSVACSPTDATLVATGGGDD----KGFFWRINQGDWASEIQ------G--------HKDSVSSLAFSMD--GQLLA 123 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~------~--------~~~~i~~~~~~~~--~~~l~ 123 (288)
...|.+|++.|.+...+.+++..| .|.... ..++.-..+. . ....|.++++.|. ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 356999999984444444454444 343322 2222111111 0 1125778888862 44566
Q ss_pred EEeCCCeEEEEeCCCCceeEEecc-------------------CCCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcccE
Q 023018 124 SGGLDGLVQIWDPSSGNLKCTLEG-------------------PGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAY 183 (288)
Q Consensus 124 ~~~~dg~i~i~d~~~~~~~~~~~~-------------------~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~ 183 (288)
++...+-|...+ ..++.-..+.. ....+.+|.++|. ...|++++..+.|...+- .++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCC
Confidence 655556555443 22332222211 1235788999883 344555544454544322 2221
Q ss_pred EEEeec-----c--------CCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCccc---cCeEEEEEcC
Q 023018 184 LNMFSG-----H--------GSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHT---EGLTCLTISA 246 (288)
Q Consensus 184 ~~~~~~-----~--------~~~i~~~~~~p~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---~~v~~~~~~~ 246 (288)
-..+.. + ...+.+|.+.|. ...|+++...+ |...+- .++....+.... .. ..+..+.++|
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l-~~~~~~~~~~i~~~p 287 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAM-PREVGDIGFPIVVHQ 287 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGS-CTTTCSCEEEEEECS
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCC-CCCCccceEEEEECC
Confidence 111110 0 134889999985 46777776544 544432 344333332100 11 3356788876
Q ss_pred -CCCEEEEE
Q 023018 247 -DSTLALSG 254 (288)
Q Consensus 247 -~~~~l~~~ 254 (288)
+...|+++
T Consensus 288 ~~~~~l~~~ 296 (394)
T 3b7f_A 288 RDPRTVWVF 296 (394)
T ss_dssp SCTTCEEEE
T ss_pred CCCCEEEEE
Confidence 33444444
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.84 E-value=0.28 Score=42.38 Aligned_cols=101 Identities=22% Similarity=0.163 Sum_probs=68.4
Q ss_pred EEEEEEecCCCEEEEEe-CCCeEEEEeCCCC------ce-------eEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEE
Q 023018 110 VSSLAFSMDGQLLASGG-LDGLVQIWDPSSG------NL-------KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWM 175 (288)
Q Consensus 110 i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~------~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 175 (288)
...+.++|+|+++++++ .+.++.++++... +. ..... ........+|.++|....+-.-|..|.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 35678899999887776 5789999998731 11 22222 3446788999999966666778999999
Q ss_pred EECCcc----------cEEEEeeccCCCeEEEE-----EcCCCCEEEEEeC
Q 023018 176 WNADRA----------AYLNMFSGHGSSVTCGD-----FTPDGKTICTGSD 211 (288)
Q Consensus 176 ~d~~~~----------~~~~~~~~~~~~i~~~~-----~~p~~~~l~~~~~ 211 (288)
|++... ..+.++..|-.+-.-.+ -.|+|++|++...
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 998653 35556655544333221 1468888888753
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.98 E-value=3.3 Score=34.04 Aligned_cols=189 Identities=10% Similarity=0.076 Sum_probs=111.3
Q ss_pred CCEEEEEEcCCCCcEEEE-Ee--------------CCCeEEEEEccCC--eeeEeecc------ccCcEEEEEEe---cC
Q 023018 65 DEVYSVACSPTDATLVAT-GG--------------GDDKGFFWRINQG--DWASEIQG------HKDSVSSLAFS---MD 118 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~-~~--------------~dg~i~iw~~~~~--~~~~~~~~------~~~~i~~~~~~---~~ 118 (288)
-.|..+...+ .+++-+. .+ .--.|.+||+.+. +.++++.- ....+..+.+. |.
T Consensus 87 vsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 87 TSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred EEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 3577777777 4444332 11 1136889999999 88887653 23457888887 22
Q ss_pred ----CCEEEEEe-CCCeEEEEeCCCCceeEEecc---C---------------CCCEEEEEEcCC----CCEEEEecCCC
Q 023018 119 ----GQLLASGG-LDGLVQIWDPSSGNLKCTLEG---P---------------GGGVEWVSWHPR----GHIVLAGSEDS 171 (288)
Q Consensus 119 ----~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~---~---------------~~~i~~~~~~~~----~~~l~~~~~dg 171 (288)
+.++..+. ..+-|.|+|+.+++..+.+.. + ...+..|+++|+ ++.|+.....+
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss 245 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA 245 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC
Confidence 23444443 467899999998876554420 0 236888999997 67777666544
Q ss_pred -eEEEEE---CCccc---EEEEeecc--CCCeEEEEEc-CCCCEEEEEeCCCeEEEEeCCC-C---ceeEEEcCCCcccc
Q 023018 172 -TVWMWN---ADRAA---YLNMFSGH--GSSVTCGDFT-PDGKTICTGSDDATLRVWNPKS-G---ENIHVIRGHPYHTE 237 (288)
Q Consensus 172 -~i~i~d---~~~~~---~~~~~~~~--~~~i~~~~~~-p~~~~l~~~~~dg~i~i~d~~~-~---~~~~~~~~~~~~~~ 237 (288)
.++-.. ++... .++.+-.. .+.-..+++. .+|..+++--....|..|+..+ . .....+...+ .-.
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~ 324 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFV 324 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCC
T ss_pred CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-Ccc
Confidence 343333 12221 11212111 1334456675 5676666667788899999875 1 2234443222 334
Q ss_pred CeEEEEEcCCCCEEEEEe
Q 023018 238 GLTCLTISADSTLALSGS 255 (288)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~ 255 (288)
.+..+.+.++|.+.+..+
T Consensus 325 ~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 325 FGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp SEEEEEECTTSCEEEEEC
T ss_pred ccCeEEECCCCeEEEEEC
Confidence 567788877776655554
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.84 E-value=6.2 Score=36.86 Aligned_cols=37 Identities=8% Similarity=0.084 Sum_probs=32.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+.+++..++..++++-+.|+++|+|++.+|+++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677778888889999999999999999999999875
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.64 E-value=3.7 Score=33.75 Aligned_cols=158 Identities=10% Similarity=0.057 Sum_probs=96.5
Q ss_pred cEEEEEEecCCCEEEEE-e-C-------------CCeEEEEeCCCC--ceeEEeccC------CCCEEEEEEc---CC--
Q 023018 109 SVSSLAFSMDGQLLASG-G-L-------------DGLVQIWDPSSG--NLKCTLEGP------GGGVEWVSWH---PR-- 160 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~-~-~-------------dg~i~i~d~~~~--~~~~~~~~~------~~~i~~~~~~---~~-- 160 (288)
.|..+...+.+++.+.= + - --.|.+||+.+. +.++++.-+ .+.+..+.+. |.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 57777777766643321 1 0 126889999999 888876532 3468888887 22
Q ss_pred --CCEEEEe-cCCCeEEEEECCcccEEEEee--------------c----cCCCeEEEEEcCC----CCEEEEEeCCC-e
Q 023018 161 --GHIVLAG-SEDSTVWMWNADRAAYLNMFS--------------G----HGSSVTCGDFTPD----GKTICTGSDDA-T 214 (288)
Q Consensus 161 --~~~l~~~-~~dg~i~i~d~~~~~~~~~~~--------------~----~~~~i~~~~~~p~----~~~l~~~~~dg-~ 214 (288)
+.+++.+ +..+.|.++|+.+++.-+... + ....+..|+++|+ ++.|+.....+ .
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 2343433 346789999999876544331 0 0246788999997 78888777655 2
Q ss_pred EEEEe---CCCC---ceeEEEcCCCccccCeEEEEEc-CCCCEEEEEeCCCcEEEEEcCC
Q 023018 215 LRVWN---PKSG---ENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 215 i~i~d---~~~~---~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~t 267 (288)
++-.. ++.. ..+..+... .....-..+++. .+|.++++--....|..|+..+
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~k-g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGNR-GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEEC-CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEEEHHHhhCcchhhceEEeeec-CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 33222 1211 222322211 011233456775 5787777777888999999876
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.21 E-value=4.1 Score=34.50 Aligned_cols=106 Identities=7% Similarity=-0.027 Sum_probs=59.8
Q ss_pred CCEEEEEEcCCCC-EEEEecCCCeEEEEECCcc---cEEEEee---c------cCCCeEEEEEcCC---CCEEEEE-eC-
Q 023018 150 GGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRA---AYLNMFS---G------HGSSVTCGDFTPD---GKTICTG-SD- 211 (288)
Q Consensus 150 ~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~---~------~~~~i~~~~~~p~---~~~l~~~-~~- 211 (288)
...+.|+|.|++. .|+++...|.|++++.... ..+..+. . ....+..|+|+|+ ..+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3468899999986 4555667899999975322 1222221 1 1356789999995 2344333 21
Q ss_pred -C----------CeEEEEeCCCC----------ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeC
Q 023018 212 -D----------ATLRVWNPKSG----------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (288)
Q Consensus 212 -d----------g~i~i~d~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 256 (288)
+ ..|.-|.+..+ +.+..+... ........|.|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~-~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL-HRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES-SSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC-CCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444554321 222222211 12234678999999987777654
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.25 E-value=6.2 Score=33.43 Aligned_cols=103 Identities=19% Similarity=0.171 Sum_probs=59.8
Q ss_pred cEEEEEEecCCC-EEEEEeCCCeEEEEeCCCCc---eeEEec----c-----CCCCEEEEEEcCC----CCEEEEecC--
Q 023018 109 SVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGN---LKCTLE----G-----PGGGVEWVSWHPR----GHIVLAGSE-- 169 (288)
Q Consensus 109 ~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~---~~~~~~----~-----~~~~i~~~~~~~~----~~~l~~~~~-- 169 (288)
.-+.|+|.|++. .|+++...|.|++++..... .+..+. . .......|+|+|+ +.++++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 347899999996 56666788999999754321 122221 1 1356889999995 444443221
Q ss_pred C----------CeEEEEECCc----------ccEEEEee--ccCCCeEEEEEcCCCCEEEEEeC
Q 023018 170 D----------STVWMWNADR----------AAYLNMFS--GHGSSVTCGDFTPDGKTICTGSD 211 (288)
Q Consensus 170 d----------g~i~i~d~~~----------~~~~~~~~--~~~~~i~~~~~~p~~~~l~~~~~ 211 (288)
+ ..|.-|.+.. .+.+..+. ........|+|.|+|.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1444455532 12233222 11224678999999977666554
No 357
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=90.21 E-value=5.9 Score=31.49 Aligned_cols=186 Identities=9% Similarity=0.043 Sum_probs=107.1
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeee-------E--eeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeC---CCCc---
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWA-------S--EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP---SSGN--- 140 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~-------~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~---~~~~--- 140 (288)
+..++++.+.+|.|+--.+...+.. . .+. ....+..+........++..+..|.++-+.. ....
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4567788899999998876543211 1 122 2234455555555567777788888765543 2221
Q ss_pred ---e---eEEeccCCCCEEEEEEcC---CCCEEEEecCCCeEEEEECCcc-------cEEEEeeccCCCeEEEEEcCCCC
Q 023018 141 ---L---KCTLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRA-------AYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 141 ---~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
. ...+.. ...|.++..-+ ....++..+..|.++...+... .....+.. ...+..+.......
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 1 111222 23355443332 4567888899999998877432 22222332 44565555555566
Q ss_pred EEEEEeCCCeEEEEeCCC----C---ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 205 TICTGSDDATLRVWNPKS----G---ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~----~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
.++..+..|.+..+.... + +-+..+.-. ....|..+..-.++..|++.+..|..+...+.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~--~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK--EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC--TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC--CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 788888999988887542 1 112222211 23456666555556667788888888888874
No 358
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=89.15 E-value=12 Score=33.67 Aligned_cols=187 Identities=14% Similarity=0.168 Sum_probs=90.5
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeec--c----ccCcEEEEEEecCC-CEEEEEeCC-------CeE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--G----HKDSVSSLAFSMDG-QLLASGGLD-------GLV 131 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~----~~~~i~~~~~~~~~-~~l~~~~~d-------g~i 131 (288)
.|..|+++|.+...++++...|.|..++-.......... . ....|.+|+++|.. ..++++... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 799999999766667777766666555433333333222 1 12468999999843 344433321 123
Q ss_pred EEEeC-CCCceeEEeccC---------CCCEEEEEEcCC-CCEEEEecCCCeEEEEECC-cc---cEEEEeec-------
Q 023018 132 QIWDP-SSGNLKCTLEGP---------GGGVEWVSWHPR-GHIVLAGSEDSTVWMWNAD-RA---AYLNMFSG------- 189 (288)
Q Consensus 132 ~i~d~-~~~~~~~~~~~~---------~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~-~~---~~~~~~~~------- 189 (288)
.||.. ..++.-..+... ...+..|+++|. ...++++...|. .+|-.. .+ +.+..+..
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~~ 182 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPGTYIYD 182 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCCCCBSC
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCcccccC
Confidence 44443 333322222111 112467899984 456666653321 223222 12 22221111
Q ss_pred -------cCCCeEEEEEcCCC-------CEEEEEeCCCeEEEEe-CCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE
Q 023018 190 -------HGSSVTCGDFTPDG-------KTICTGSDDATLRVWN-PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (288)
Q Consensus 190 -------~~~~i~~~~~~p~~-------~~l~~~~~dg~i~i~d-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 254 (288)
....+..+.++|.. ..++++..++.-.||- ...|+....+...+ .......+.++|++.++++.
T Consensus 183 p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p-~~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 183 PNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQP-KGLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp TTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCC-CSSEEEEEEECTTSEEEEEE
T ss_pred cccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCC-CcccceEEEECCCCeEEEEe
Confidence 11247778888743 2566666554322343 23344444443221 11122445677766555543
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.79 E-value=15 Score=34.26 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=31.9
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEeCCCCceeEEe
Q 023018 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (288)
Q Consensus 109 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 145 (288)
.+.+++..++..++++-+.|+++++|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677777788889999999999999999999887764
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.78 E-value=8.7 Score=31.42 Aligned_cols=182 Identities=10% Similarity=0.101 Sum_probs=89.9
Q ss_pred CcEEEEEeCCCeEEEEEccC-C-eeeEe-eccccCcEEEEEEec--CCCEEEEEeCCC----eEEEEeCCCCceeEEecc
Q 023018 77 ATLVATGGGDDKGFFWRINQ-G-DWASE-IQGHKDSVSSLAFSM--DGQLLASGGLDG----LVQIWDPSSGNLKCTLEG 147 (288)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~-~-~~~~~-~~~~~~~i~~~~~~~--~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~ 147 (288)
...|.+|+..| +.+++... + ..... .......|.+|++.| .+. |.+++..| .|...+ ..++.-..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER-MLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC-EEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe-EEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 44666777766 55555432 2 22211 112245799999998 444 44444444 344332 33332222211
Q ss_pred --------------CCCCEEEEEEcCC--CCEEEEecCCCeEEEEECC--cccEEEEee----------------ccCCC
Q 023018 148 --------------PGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNAD--RAAYLNMFS----------------GHGSS 193 (288)
Q Consensus 148 --------------~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~--~~~~~~~~~----------------~~~~~ 193 (288)
....|.++++.|. ...+++++..+.|...+-. +.+.+.... .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1124778899872 4556666555666555321 112221110 01235
Q ss_pred eEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCC-Cc-c--------ccCeEEEEEcCC-CCEEEEEeCCCcEE
Q 023018 194 VTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGH-PY-H--------TEGLTCLTISAD-STLALSGSKDGSVH 261 (288)
Q Consensus 194 i~~~~~~p-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~-~--------~~~v~~~~~~~~-~~~l~~~~~dg~i~ 261 (288)
+.+|.+.| +...|+.+...+.|...+ ..++....+... .. . ...+.++.++|. ...|+++...| |+
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~ 256 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IY 256 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EE
Confidence 78899988 345566665555555443 233433333210 00 0 134888999985 45666665444 44
Q ss_pred EE
Q 023018 262 MV 263 (288)
Q Consensus 262 iw 263 (288)
..
T Consensus 257 ~s 258 (394)
T 3b7f_A 257 RM 258 (394)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.01 E-value=1.4 Score=42.03 Aligned_cols=37 Identities=8% Similarity=0.084 Sum_probs=31.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 238 GLTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 238 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
.+.+++..++..+|++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3445566678889999999999999999999999875
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.26 E-value=13 Score=29.78 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=105.4
Q ss_pred CcEEEEEeCCCeEEEEEccCCe---------eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEE---EeCCCC-----
Q 023018 77 ATLVATGGGDDKGFFWRINQGD---------WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI---WDPSSG----- 139 (288)
Q Consensus 77 ~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i---~d~~~~----- 139 (288)
..++++.+.+|.|+--.+.+.+ .-..+. ....+..+........|+.-+..|.++- |++...
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 4577788899999876543211 111222 2334555544455556666666776554 445432
Q ss_pred -ceeE---EeccCCCCEEEEEEcC---CCCEEEEecCCCeEEEEECCccc-------EEEEeeccCCCeEEEEEcCCCCE
Q 023018 140 -NLKC---TLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRAA-------YLNMFSGHGSSVTCGDFTPDGKT 205 (288)
Q Consensus 140 -~~~~---~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~p~~~~ 205 (288)
..+. .+. ....|.++..-+ +...+++.+..|.++...+.... ....++. ...+..+........
T Consensus 82 G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ 159 (327)
T 3uc1_A 82 GQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDD 159 (327)
T ss_dssp CEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCE
T ss_pred CEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCE
Confidence 1111 122 233455544333 46799999999999998765422 1222332 344555555555677
Q ss_pred EEEEeCCCeEEEEeCC--CCce-------eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 023018 206 ICTGSDDATLRVWNPK--SGEN-------IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~--~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 266 (288)
|+..+..|.+..+... .-.. +..+.- . ....|.++...+.+..|+..+..|.++.-.+.
T Consensus 160 ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 160 LLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF-N-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-C-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEECCCeEEEEECcccccCcCCcCCCCeeeecC-C-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 8888889988877665 2111 111111 1 34557777666666688888899988887753
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=85.07 E-value=12 Score=29.15 Aligned_cols=193 Identities=11% Similarity=0.025 Sum_probs=107.9
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEE---EEccCCeeeEeeccccCcEEEEEEec--CCCEEEEEeCCCeEEEEeCCCC
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFF---WRINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQIWDPSSG 139 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~i---w~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 139 (288)
+.+..+.-..... .|+.-+..|.++- |++........+. ....|..+.. + +..+++..+..|.++-..+...
T Consensus 24 D~~~~~~~~~t~~-~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFTE-GLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETTS-CEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECCCC-EEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 3455444443233 3444555677654 3333332111133 3556666644 4 4568999999999998876543
Q ss_pred c------eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc---------ccEEEEeeccCCCeEEEEEcCCCC
Q 023018 140 N------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR---------AAYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 140 ~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
. ....++ ....+..+........++..+..|.++.+.... |.....+. ....|..+...+++.
T Consensus 101 ~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 101 EYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEP 178 (276)
T ss_dssp TTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCS
T ss_pred hhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCC
Confidence 2 111222 234566665555566788888889988887532 11111222 234566655555667
Q ss_pred EEEEEeCCCeEEEEeCCC-------CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEE--EEcC
Q 023018 205 TICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM--VNIT 266 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i--wd~~ 266 (288)
.++..+..|.++...+.. ++-+..+. ....+..+........++..+..|.+.. +++.
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~----~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG----TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC----SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc----CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 888889999988876532 22222331 2344544443333445666677888777 7654
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=83.48 E-value=6.2 Score=34.54 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=43.7
Q ss_pred CeEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEE
Q 023018 193 SVTCGDFTPDGKTICTGSDD------------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 254 (288)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+... ....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P--~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC--CCccCcCeeECCCCCEEEEE
Confidence 34678999999866554322 24667787788776666654 45779999999999888775
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.27 E-value=6.5 Score=35.20 Aligned_cols=34 Identities=6% Similarity=0.121 Sum_probs=28.2
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 239 LTCLTISADSTLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 239 v~~~~~~~~~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
|.++.+ +..+|++-+.|.++|+|++.+++++.+.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 444444 4679999999999999999999988876
No 366
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=83.00 E-value=16 Score=28.95 Aligned_cols=185 Identities=12% Similarity=0.058 Sum_probs=101.3
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeeeE---------eeccccCcEEEEEEecCCCEEEEEeCCCeEEEE---eCCCC----
Q 023018 76 DATLVATGGGDDKGFFWRINQGDWAS---------EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSSG---- 139 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~~---- 139 (288)
+..++++.+.+|.|+--.+...+... .+. ....+..+........|+..+..|.++-+ ++...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 44577888999999877665422111 122 22344444444455567777778875544 44332
Q ss_pred --ceeE---EeccCCCCEEEEEEc---CCCCEEEEecCCCeEEEEECCcc-------cEEEEeeccCCCeEEEEEcCCCC
Q 023018 140 --NLKC---TLEGPGGGVEWVSWH---PRGHIVLAGSEDSTVWMWNADRA-------AYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 140 --~~~~---~~~~~~~~i~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
..+. .+. ....|.++..- .++.+++..+..|.++...+... .....+... ..+..+.......
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 1111 122 23345555432 34567889999999999876421 112223323 4555555555556
Q ss_pred EEEEEeCCCeEEEEeCCCC-------ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 023018 205 TICTGSDDATLRVWNPKSG-------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 265 (288)
.++..+..|.+..+....- +-+..+.-. ....|.++...+++..|++.+..|.++-.++
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG--EGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC--CCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 7878888998877765321 111212111 2345666655555567788888888888776
No 367
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=82.88 E-value=28 Score=31.72 Aligned_cols=164 Identities=16% Similarity=0.241 Sum_probs=82.8
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc------ccCcEEEEEEecCC-CEEEEEeCCCe----EE
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG------HKDSVSSLAFSMDG-QLLASGGLDGL----VQ 132 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~i~~~~~~~~~-~~l~~~~~dg~----i~ 132 (288)
...|.+|+++|.+...+++++..+.|....=........... ....+.+|++.|.. ..++++..... -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 458999999997677777777777665544222223222211 13469999999843 34444432211 23
Q ss_pred EE-eCCCCceeEEeccC---------CCCEEEEEEcCC-CCEEEEecCCCeEEEEECCcc---cEEEEee---ccCCCeE
Q 023018 133 IW-DPSSGNLKCTLEGP---------GGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRA---AYLNMFS---GHGSSVT 195 (288)
Q Consensus 133 i~-d~~~~~~~~~~~~~---------~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~---~~~~~~~---~~~~~i~ 195 (288)
|| ....++.-..+... ...+..++++|. ...++++...+.|.. ....+ +.+.... .....+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCeE
Confidence 33 23344433332211 113556888874 345666654443322 11122 2222111 1124578
Q ss_pred EEEEcC-CCCEEEEEeCC-CeEEEEeCCCCceeEEE
Q 023018 196 CGDFTP-DGKTICTGSDD-ATLRVWNPKSGENIHVI 229 (288)
Q Consensus 196 ~~~~~p-~~~~l~~~~~d-g~i~i~d~~~~~~~~~~ 229 (288)
.+.+.| ++..++++..+ +.|+. ....|+....+
T Consensus 173 ~i~~~p~~~~~~~~~~~~~~~v~~-S~DgG~TW~~~ 207 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATAPQGMYV-THDGGVSWEPV 207 (789)
T ss_dssp EEEECTTSTTCEEEEESSTTCEEE-ESSTTSSCEEC
T ss_pred EEEECCCCCCEEEEEEcCCCeEEE-EcCCCcCcccC
Confidence 899988 45567666654 44432 33334444443
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=80.53 E-value=20 Score=28.62 Aligned_cols=155 Identities=8% Similarity=-0.001 Sum_probs=90.7
Q ss_pred CCEEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCe-------eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEe
Q 023018 65 DEVYSVACSPT--DATLVATGGGDDKGFFWRINQGD-------WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (288)
Q Consensus 65 ~~v~~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 135 (288)
..|.++...+. ...++++.+..|.++.-.+.... ....+.. ...+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 34555443331 35688899999999998875422 1222333 34555555555556788888889888776
Q ss_pred CC--CC----c-----eeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-------cEEEEee--ccCCCeE
Q 023018 136 PS--SG----N-----LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-------AYLNMFS--GHGSSVT 195 (288)
Q Consensus 136 ~~--~~----~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~--~~~~~i~ 195 (288)
.. .- + ....+. ....|.++...+.+..++..+..|.++.-.+... +-+..++ .....+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 65 21 1 111122 2345777666666678899999999988875322 2222222 2133455
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCC
Q 023018 196 CGDFTPDGKTICTGSDDATLRVWNPK 221 (288)
Q Consensus 196 ~~~~~p~~~~l~~~~~dg~i~i~d~~ 221 (288)
.+........++..+..|.+.-+...
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehh
Confidence 54444445567777778877777643
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.97 E-value=15 Score=32.02 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=42.9
Q ss_pred CeEEEEEcCCCCEEEEEeC------------CCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCCCCEEEEEe
Q 023018 193 SVTCGDFTPDGKTICTGSD------------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS 255 (288)
Q Consensus 193 ~i~~~~~~p~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 255 (288)
....|.|.++|.+.++... ...|..++..+++....+... ....++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P--~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC--CCccccCCEECCCCCEEEEEE
Confidence 4578999999987764322 126777888778765555432 245689999999999888763
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=77.06 E-value=20 Score=31.22 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=43.7
Q ss_pred CCEEEEEEcCCCCEEEEecC------------CCeEEEEECCcccEEEEeecc-CCCeEEEEEcCCCCEEEEEe
Q 023018 150 GGVEWVSWHPRGHIVLAGSE------------DSTVWMWNADRAAYLNMFSGH-GSSVTCGDFTPDGKTICTGS 210 (288)
Q Consensus 150 ~~i~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~p~~~~l~~~~ 210 (288)
.....|.|.++|.+.++... ...|+.++..+++....+... ...++.++|+|+++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34678999999987773321 226777887777765555433 35689999999999988764
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=76.39 E-value=27 Score=27.81 Aligned_cols=186 Identities=6% Similarity=-0.044 Sum_probs=103.8
Q ss_pred CCcEEEEEeCCCeEEEEEccCC----eeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE---eCCCC------cee
Q 023018 76 DATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSSG------NLK 142 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~~------~~~ 142 (288)
+..++++.+.+|.|+--.+... .....+.. ...+..+........|+..+..|.++-+ ++... ..+
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 4567888899999987765421 11112332 3344445455555677777778876554 44322 211
Q ss_pred E---EeccCCCCEEEE-EEcC--CCCEEEEecCCCeEEEEECCcc--------cEEEEeeccCCCeEEEEEcCCCCEEEE
Q 023018 143 C---TLEGPGGGVEWV-SWHP--RGHIVLAGSEDSTVWMWNADRA--------AYLNMFSGHGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 143 ~---~~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~p~~~~l~~ 208 (288)
. .+. ....|.++ ...+ ++.+++.++..|.++...+... .....+.. ...+..+........|+.
T Consensus 83 ~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 83 ANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEE
T ss_pred hhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEE
Confidence 1 122 22345554 3332 2567889999999999877422 11122222 245555555555667888
Q ss_pred EeCCCeEEEEeCCC-------CceeEEEcCCCccccCeEEEEEcCCCC-EEEEEeCCCcEEEEEcC
Q 023018 209 GSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNIT 266 (288)
Q Consensus 209 ~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~ 266 (288)
.+..|.+..+.... ++-+..+.-. ....|.++...+++. .|++.+..|..+..++.
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~--~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLK--EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCC--TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeC--CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 88899888886532 1112222211 234566665444444 67778888888777764
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.20 E-value=16 Score=31.98 Aligned_cols=59 Identities=20% Similarity=0.343 Sum_probs=42.4
Q ss_pred CEEEEEEcCCCCEEEEecCC------------CeEEEEECCcccEEEEeecc-CCCeEEEEEcCCCCEEEEE
Q 023018 151 GVEWVSWHPRGHIVLAGSED------------STVWMWNADRAAYLNMFSGH-GSSVTCGDFTPDGKTICTG 209 (288)
Q Consensus 151 ~i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~p~~~~l~~~ 209 (288)
..--|+|+|.|++++.-..+ ..+.+.+..+++..+-+..+ .+.++.++|+|+++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34668999999866664332 34667777777766555543 4678999999999988775
No 373
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=71.33 E-value=40 Score=27.46 Aligned_cols=142 Identities=13% Similarity=0.036 Sum_probs=82.8
Q ss_pred CCcEEEEEeCCCeEEEEEccC---------CeeeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE---eCCCC----
Q 023018 76 DATLVATGGGDDKGFFWRINQ---------GDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSSG---- 139 (288)
Q Consensus 76 ~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~~---- 139 (288)
+..++++.+.+|.|+--.+.. +.....+. ....+..+........|+..+..|.++-+ ++...
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a 84 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNA 84 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCccc
Confidence 566888999999999765532 12222333 34555555555556667777777876654 44322
Q ss_pred --ceeE---EeccCCCCEEEEEEcC---CCCEEEEecCCCeEEEEECCcc-------cEEEEeeccCCCeEEEEEcCCCC
Q 023018 140 --NLKC---TLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRA-------AYLNMFSGHGSSVTCGDFTPDGK 204 (288)
Q Consensus 140 --~~~~---~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~p~~~ 204 (288)
..+. .+. ....|.++..-. ...+|+.++..|.++...+... .....+.. ...+..+.......
T Consensus 85 ~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 85 RGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp CCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred CCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence 1111 122 233455554332 4568999999999998876432 22222322 34455555555556
Q ss_pred EEEEEeCCCeEEEEeC
Q 023018 205 TICTGSDDATLRVWNP 220 (288)
Q Consensus 205 ~l~~~~~dg~i~i~d~ 220 (288)
.|+..+..|.+..+..
T Consensus 163 ~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGE 178 (370)
T ss_dssp EEEEEETTSEEEEEEG
T ss_pred eEEEEeCCCeEEEEEc
Confidence 7888888898877764
No 374
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=70.04 E-value=36 Score=26.37 Aligned_cols=154 Identities=10% Similarity=-0.027 Sum_probs=88.7
Q ss_pred CCCEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCe------eeEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEEeC
Q 023018 64 SDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD------WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (288)
Q Consensus 64 ~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 136 (288)
...|..+.. +. +...++..+..|.++...+.... ....+. ....+..+........++..+..|.+..+..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 445665544 31 34578889999999998876532 112233 2345555555555567888888998887764
Q ss_pred CC---------CceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc-------ccEEEEeeccCCCeEEEEEc
Q 023018 137 SS---------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-------AAYLNMFSGHGSSVTCGDFT 200 (288)
Q Consensus 137 ~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~ 200 (288)
.. |.....+. ....|..+...+++..++..+..|.++...+.. ++-+..+ .....+..+...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~ 222 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI 222 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe
Confidence 21 11111222 234566665555567888889999998887643 2222233 233445444333
Q ss_pred CCCCEEEEEeCCCeEEE--EeCC
Q 023018 201 PDGKTICTGSDDATLRV--WNPK 221 (288)
Q Consensus 201 p~~~~l~~~~~dg~i~i--~d~~ 221 (288)
.....++..+..|.+.. ++..
T Consensus 223 ~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 223 KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCCEEEEEcCCCeEEEeeeCHH
Confidence 33445666677777766 6543
No 375
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.28 E-value=11 Score=33.79 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=29.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC
Q 023018 194 VTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRG 231 (288)
Q Consensus 194 i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 231 (288)
|.++.+ +..++++-+.|.++|+|++++++++....-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555444 478999999999999999999998776654
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.73 E-value=88 Score=29.92 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=30.2
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc
Q 023018 194 VTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIR 230 (288)
Q Consensus 194 i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 230 (288)
+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445566778899999999999999999998877643
No 377
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=66.53 E-value=76 Score=28.74 Aligned_cols=150 Identities=17% Similarity=0.218 Sum_probs=73.8
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeeeEeecc-----------ccCcEEEEEEecC-CCEEEEEeCC--
Q 023018 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-----------HKDSVSSLAFSMD-GQLLASGGLD-- 128 (288)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------~~~~i~~~~~~~~-~~~l~~~~~d-- 128 (288)
-.+.|.+|+++|.+...++++...|.|....=........... ....+.+++++|. ...++++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 3568999999998777777777667654433222222222221 2245899999883 3334333221
Q ss_pred ---CeEEEEe-CCCCceeEEeccC-------CCC--EEEEEEcCC-CCEEEEecCCCeEEEEECCcc---cEEEEeec--
Q 023018 129 ---GLVQIWD-PSSGNLKCTLEGP-------GGG--VEWVSWHPR-GHIVLAGSEDSTVWMWNADRA---AYLNMFSG-- 189 (288)
Q Consensus 129 ---g~i~i~d-~~~~~~~~~~~~~-------~~~--i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~-- 189 (288)
....||. ...++.-..+... .+. ...++++|. ...+++++..+.|.. ....+ +.+..+..
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~-S~DgG~TW~~~~~~~~~~ 177 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR-STDRAQTWSRMNQLPDSS 177 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE-ESSTTSSCEECTTSCCCS
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEE-ECCCCcCccccccCcccC
Confidence 1123333 3334332222211 111 146888874 345555554443332 12222 22221111
Q ss_pred -cCCCeEEEEEcCC-CCEEEEEeCCC
Q 023018 190 -HGSSVTCGDFTPD-GKTICTGSDDA 213 (288)
Q Consensus 190 -~~~~i~~~~~~p~-~~~l~~~~~dg 213 (288)
....+..|.+.|. ...++++..++
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778899884 44566666655
No 378
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=62.85 E-value=71 Score=28.46 Aligned_cols=69 Identities=16% Similarity=0.198 Sum_probs=41.4
Q ss_pred CeEEEEEc----CCCC--EEEEEeCCCeEE-EEeCCCCc-------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC
Q 023018 193 SVTCGDFT----PDGK--TICTGSDDATLR-VWNPKSGE-------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (288)
Q Consensus 193 ~i~~~~~~----p~~~--~l~~~~~dg~i~-i~d~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (288)
..+.|+.. ++++ .++.|+.+|.|. +.-...+. .+..+.... ...+|..|.++++...|++++..+
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~-~~~pI~~L~ld~~~~~LYV~t~~~ 491 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFR-EPTTISAMELSTKQQQLYIGSTAG 491 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSS-SCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecC-CCceeeeEEEcCCCCEEEEEECCE
Confidence 34555543 3443 477899999874 33222111 122222222 456789999999999999998876
Q ss_pred cEEE
Q 023018 259 SVHM 262 (288)
Q Consensus 259 ~i~i 262 (288)
.++|
T Consensus 492 V~kV 495 (667)
T 4gz8_A 492 VAQL 495 (667)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=59.93 E-value=65 Score=27.49 Aligned_cols=69 Identities=14% Similarity=0.167 Sum_probs=42.2
Q ss_pred CeEEEEEcC----CCC--EEEEEeCCCeEEEEeC-CCCc-------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC
Q 023018 193 SVTCGDFTP----DGK--TICTGSDDATLRVWNP-KSGE-------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (288)
Q Consensus 193 ~i~~~~~~p----~~~--~l~~~~~dg~i~i~d~-~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (288)
..++|+... ++. .++.|+.+|.|.-.-+ ..+. .+..+...+ ...+|..|.++++...|++++..+
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~-~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFR-EPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSS-SCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecC-CCCccceEEEcCCCCEEEEEECCe
Confidence 456666553 243 3778999998753322 2221 222333321 357889999999999999998876
Q ss_pred cEEE
Q 023018 259 SVHM 262 (288)
Q Consensus 259 ~i~i 262 (288)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=58.99 E-value=58 Score=24.87 Aligned_cols=141 Identities=11% Similarity=-0.006 Sum_probs=77.5
Q ss_pred cEEEEEeCCCeEEEEEccCCee-eEeeccccCcEEEEEEecCCCEEEEEeCCCeEEEE---eCCCCc----ee---EEec
Q 023018 78 TLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW---DPSSGN----LK---CTLE 146 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~---d~~~~~----~~---~~~~ 146 (288)
..+++.+.+|.|+--....... ...+... ..+..+........|+..+..|.++-+ ++..++ .+ ..+.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3456677788887655433111 1123322 344444444444556666777876554 442221 11 1122
Q ss_pred cCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc-------ccEEEEeeccCCCeEEEEEc-CCCCEEEEEeCCCeEEEE
Q 023018 147 GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-------AAYLNMFSGHGSSVTCGDFT-PDGKTICTGSDDATLRVW 218 (288)
Q Consensus 147 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~-p~~~~l~~~~~dg~i~i~ 218 (288)
....|.++....++..|+.++..|.++...+.. +.....+.. ...+..+... .....++..+..|.+..+
T Consensus 82 -~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 82 -PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp -TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred -CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 234566664434566788899999999987743 223333332 2344444454 345678888899998888
Q ss_pred eCC
Q 023018 219 NPK 221 (288)
Q Consensus 219 d~~ 221 (288)
...
T Consensus 160 ~~~ 162 (256)
T 1zvt_A 160 PVS 162 (256)
T ss_dssp EGG
T ss_pred EHH
Confidence 764
No 381
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=57.97 E-value=68 Score=25.32 Aligned_cols=142 Identities=9% Similarity=0.020 Sum_probs=83.2
Q ss_pred cEEEEEeCCCeEEEEEccCCe---------e---eEeeccccCcEEEEEEec---CCCEEEEEeCCCeEEEEeCCCC---
Q 023018 78 TLVATGGGDDKGFFWRINQGD---------W---ASEIQGHKDSVSSLAFSM---DGQLLASGGLDGLVQIWDPSSG--- 139 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~~~---------~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~--- 139 (288)
..++..+..|.++-.....-. + ...+. ....|.++...+ ...+|+..+..|.++...+...
T Consensus 59 ~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~ 137 (312)
T 1suu_A 59 DYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAV 137 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC-
T ss_pred CEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhcc
Confidence 345566777887766654211 1 01122 233455554333 4567888899999998876322
Q ss_pred ----ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-------cEEEEeec-cCCCeEEEEEcCCCCEEE
Q 023018 140 ----NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-------AYLNMFSG-HGSSVTCGDFTPDGKTIC 207 (288)
Q Consensus 140 ----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~-~~~~i~~~~~~p~~~~l~ 207 (288)
.....+.. ...+..+........++..+..|.+..+....- +-+..++. ....|..+...+++..|+
T Consensus 138 r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~ 216 (312)
T 1suu_A 138 KSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLL 216 (312)
T ss_dssp ---CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEE
T ss_pred CCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEE
Confidence 22222333 345666655555667888888999998876431 11222221 234566665555567788
Q ss_pred EEeCCCeEEEEeCC
Q 023018 208 TGSDDATLRVWNPK 221 (288)
Q Consensus 208 ~~~~dg~i~i~d~~ 221 (288)
+.+..|......+.
T Consensus 217 ~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 217 IVSENGYGKRLNMS 230 (312)
T ss_dssp EEETTSEEEEEEGG
T ss_pred EEECCCceEEEEHH
Confidence 88889998888764
No 382
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=55.72 E-value=1.2e+02 Score=27.35 Aligned_cols=199 Identities=8% Similarity=0.036 Sum_probs=101.9
Q ss_pred CEEEEE-EcCCCCcEEEEEeCCC----eEEEEEccCCeeeEe-ec-cccC------cEEEEEEecCCCEEEEEe------
Q 023018 66 EVYSVA-CSPTDATLVATGGGDD----KGFFWRINQGDWASE-IQ-GHKD------SVSSLAFSMDGQLLASGG------ 126 (288)
Q Consensus 66 ~v~~~~-~~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~-~~-~~~~------~i~~~~~~~~~~~l~~~~------ 126 (288)
....+. ++|++...+++-+..| .++++|+.+++.+.. +. ..+. ....++|..+..++++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 345555 7785555555544443 599999999887642 22 0111 113347864433333321
Q ss_pred ----CCCeEEEEeCCCCc--eeEEeccCCCC-EEEEEEcCCCC-----EEEEec---CCCeEEEEECCc--ccEEEEeec
Q 023018 127 ----LDGLVQIWDPSSGN--LKCTLEGPGGG-VEWVSWHPRGH-----IVLAGS---EDSTVWMWNADR--AAYLNMFSG 189 (288)
Q Consensus 127 ----~dg~i~i~d~~~~~--~~~~~~~~~~~-i~~~~~~~~~~-----~l~~~~---~dg~i~i~d~~~--~~~~~~~~~ 189 (288)
.-..|+.|.+.+.. -...+...... ..+...+++++ .+++.+ ....+++.+... ++ ...+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeec
Confidence 12468888877653 22334433333 23344555555 244433 224567777653 33 222222
Q ss_pred cCCCeEEEEEcCCCCEEEEE----------eCCCeEEEEeCCCCc-------eeEEEcCCCccccCeEEEEEcCCCCEEE
Q 023018 190 HGSSVTCGDFTPDGKTICTG----------SDDATLRVWNPKSGE-------NIHVIRGHPYHTEGLTCLTISADSTLAL 252 (288)
Q Consensus 190 ~~~~i~~~~~~p~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 252 (288)
.... .+..++.+.+++.. ...+.|.+.++.++. ....+-.+. ....+..+.|..+ .+++
T Consensus 289 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 289 PSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT-ANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp CTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC-TTEEEEEEEECSS-CEEE
T ss_pred CCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC-CCCeEEEEEEECC-EEEE
Confidence 2221 12234455444422 246678889887531 233322221 3446778888875 5666
Q ss_pred EEeCCC--cEEEEEcCCCc
Q 023018 253 SGSKDG--SVHMVNITTGK 269 (288)
Q Consensus 253 ~~~~dg--~i~iwd~~t~~ 269 (288)
+...++ .|+++++.+|+
T Consensus 365 ~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEEETTEEEEEEECEETTE
T ss_pred EEEECCEEEEEEEECCCCc
Confidence 666666 47778877664
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=55.60 E-value=84 Score=26.80 Aligned_cols=68 Identities=13% Similarity=0.128 Sum_probs=44.8
Q ss_pred CEEEEEEcCC-----CCcEEEEEeCCCeEEEEEccCC-e-------eeEeecc--ccCcEEEEEEecCCCEEEEEeCCCe
Q 023018 66 EVYSVACSPT-----DATLVATGGGDDKGFFWRINQG-D-------WASEIQG--HKDSVSSLAFSMDGQLLASGGLDGL 130 (288)
Q Consensus 66 ~v~~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~-~-------~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 130 (288)
..++|+.... +-..++.|+.+|.|.-.-+... . .+..+.. ...+|..|.++++..+|.+++..+.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 5777776541 2356788999998754443221 1 2223332 3578999999999999999998876
Q ss_pred EEE
Q 023018 131 VQI 133 (288)
Q Consensus 131 i~i 133 (288)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 384
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=55.49 E-value=67 Score=24.52 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=74.0
Q ss_pred EEEEEeCCCeEEEEeCCCCce-eEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCc-------ccEEEE-ee-cc
Q 023018 121 LLASGGLDGLVQIWDPSSGNL-KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-------AAYLNM-FS-GH 190 (288)
Q Consensus 121 ~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~-~~-~~ 190 (288)
.+++.+.+|.|+--....... ...++.. ..+..+........|+..+..|.++-+.... |.++.. +. ..
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 345566777776554332110 1112322 2344443333444566666778876664421 222111 11 12
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------CceeEEEcCCCccccCeEEEEEc-CCCCEEEEEeCCCcEEE
Q 023018 191 GSSVTCGDFTPDGKTICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTIS-ADSTLALSGSKDGSVHM 262 (288)
Q Consensus 191 ~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i 262 (288)
...|..+....++.+|+.++..|.++...+.. +.....+. ....+..+... ..+..|+..+..|.+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~----~~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP----ENAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC----TTCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC----CCCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 34566664434567788899999998887632 22222222 12344444444 34456777888898888
Q ss_pred EEcC
Q 023018 263 VNIT 266 (288)
Q Consensus 263 wd~~ 266 (288)
+.+.
T Consensus 159 f~~~ 162 (256)
T 1zvt_A 159 FPVS 162 (256)
T ss_dssp EEGG
T ss_pred EEHH
Confidence 8774
No 385
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=55.06 E-value=84 Score=25.53 Aligned_cols=194 Identities=13% Similarity=0.115 Sum_probs=100.8
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC--------e---eeEeecc-ccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQG--------D---WASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--------~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
.|..++.. ....+.-..+|.|+.|-.... . ....+.. ....+..++++.-....+.-..+|.|+.
T Consensus 54 ~i~~i~~G---~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~ 130 (389)
T 3kci_A 54 RPVQLIGG---EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 130 (389)
T ss_dssp CEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEE
T ss_pred ceEEEEeC---CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEE
Confidence 35556543 345555577899999965321 0 1111111 2234555666655566666678999999
Q ss_pred EeCCCCc-----------eeEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-c----------EEEEee-c
Q 023018 134 WDPSSGN-----------LKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-A----------YLNMFS-G 189 (288)
Q Consensus 134 ~d~~~~~-----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~-~ 189 (288)
|-..... ....+.. ....|..++.. ..+.++-..+|.|+.|-.... + ....+. .
T Consensus 131 wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~ 208 (389)
T 3kci_A 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 208 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG
T ss_pred EeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEeccc
Confidence 9543210 1111111 12246666653 445666677899999965321 1 111111 1
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-c--------eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcE
Q 023018 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG-E--------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSV 260 (288)
Q Consensus 190 ~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~-~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 260 (288)
....|..++......+.++-..+|.|+.|-.... + ..............|..++... ...++-..+|.|
T Consensus 209 ~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v 286 (389)
T 3kci_A 209 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAV 286 (389)
T ss_dssp TTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCE
T ss_pred CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeE
Confidence 2345667766543356666778999999954321 1 0111111111223466665543 334444678888
Q ss_pred EEEEcC
Q 023018 261 HMVNIT 266 (288)
Q Consensus 261 ~iwd~~ 266 (288)
+.|=..
T Consensus 287 ~~wG~n 292 (389)
T 3kci_A 287 YTWGKG 292 (389)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 888653
No 386
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=54.58 E-value=1.3e+02 Score=27.43 Aligned_cols=153 Identities=10% Similarity=0.106 Sum_probs=77.7
Q ss_pred cCcEEEEEEecCC-CEEEEEeCCCeEEEEeCCCCceeEEeccC-------CCCEEEEEEcCC-CCEEEEecCCCe----E
Q 023018 107 KDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLEGP-------GGGVEWVSWHPR-GHIVLAGSEDST----V 173 (288)
Q Consensus 107 ~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~~~~-~~~l~~~~~dg~----i 173 (288)
...|.+|+++|.. ..+++++..+.|...+ ..++.-..+... ...+.+|+++|. ...++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 4689999999863 4566666666665544 334333333221 236999999984 344444433211 3
Q ss_pred EEEECC-cccEEEEeec---------cCCCeEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCC---ccccCe
Q 023018 174 WMWNAD-RAAYLNMFSG---------HGSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHP---YHTEGL 239 (288)
Q Consensus 174 ~i~d~~-~~~~~~~~~~---------~~~~i~~~~~~p~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~v 239 (288)
.||-.. .++.=..+.. ....+..+++.|. ...++.+...+.|. .....|+....+.... .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCe
Confidence 333322 2321111110 0013456788874 45666666444432 2223344444443211 112457
Q ss_pred EEEEEcC-CCCEEEEEeCC-CcEE
Q 023018 240 TCLTISA-DSTLALSGSKD-GSVH 261 (288)
Q Consensus 240 ~~~~~~~-~~~~l~~~~~d-g~i~ 261 (288)
..+.++| ++..|+++..+ +.|+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~~~~v~ 195 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATAPQGMY 195 (789)
T ss_dssp EEEEECTTSTTCEEEEESSTTCEE
T ss_pred EEEEECCCCCCEEEEEEcCCCeEE
Confidence 8889988 44555665544 4443
No 387
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=47.34 E-value=75 Score=27.44 Aligned_cols=69 Identities=7% Similarity=0.029 Sum_probs=41.9
Q ss_pred CeEEEEEcCCCC--EEEEEeCCCeEEEEeCCCC----ceeEEEcCCCccccCeE-EEEEcCCCCEEEEEeCCCcEEE
Q 023018 193 SVTCGDFTPDGK--TICTGSDDATLRVWNPKSG----ENIHVIRGHPYHTEGLT-CLTISADSTLALSGSKDGSVHM 262 (288)
Q Consensus 193 ~i~~~~~~p~~~--~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i 262 (288)
.+++|+....+. .++.|+.+|.|.-.-+... ..+..+.... ...+|. .|.+++++..|++++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-CCCccccceEEccCCCeEEEEecccccee
Confidence 455666555333 4778999998765444322 1233333221 245674 8999999999999877654444
No 388
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=46.60 E-value=1e+02 Score=27.43 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=47.1
Q ss_pred CeeEeecCCCCEEEEEEcCC---C--CcEEEEEeCCCeEE-EEEccCCe-------eeEeec--cccCcEEEEEEecCCC
Q 023018 56 STHIFSGHSDEVYSVACSPT---D--ATLVATGGGDDKGF-FWRINQGD-------WASEIQ--GHKDSVSSLAFSMDGQ 120 (288)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~~~---~--~~~l~~~~~dg~i~-iw~~~~~~-------~~~~~~--~~~~~i~~~~~~~~~~ 120 (288)
++....+.....+.|+.... + -..++.|+.+|.|. +....... .+..+. ....+|..|.++++..
T Consensus 403 Pll~~~~~~~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~ 482 (667)
T 4gz8_A 403 PIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ 482 (667)
T ss_dssp CSEEECSSSCCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTT
T ss_pred ceEEEcCcccceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCC
Confidence 33333333445666665321 2 24678899999875 33222211 122222 3567899999999999
Q ss_pred EEEEEeCCCeEEE
Q 023018 121 LLASGGLDGLVQI 133 (288)
Q Consensus 121 ~l~~~~~dg~i~i 133 (288)
+|++++..+.++|
T Consensus 483 ~LYV~t~~~V~kV 495 (667)
T 4gz8_A 483 QLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEBSSCEEEE
T ss_pred EEEEEECCEEEEE
Confidence 9999998887766
No 389
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=46.08 E-value=74 Score=27.48 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=45.8
Q ss_pred CCCEEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCe----eeEeec--cccCcEE-EEEEecCCCEEEEEeCCCeEEE
Q 023018 64 SDEVYSVACSPT-DATLVATGGGDDKGFFWRINQGD----WASEIQ--GHKDSVS-SLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 64 ~~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~--~~~~~i~-~~~~~~~~~~l~~~~~dg~i~i 133 (288)
....++++.... +-..++.|+.+|.|.-..+.... ....+. ....+|. .|.++++..+|++++..+.++|
T Consensus 399 ~~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 399 RDRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SSCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ccceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 345777776552 34577889999988666554321 222222 2246785 8999999999999887765555
No 390
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=45.08 E-value=1.1e+02 Score=24.18 Aligned_cols=188 Identities=8% Similarity=0.115 Sum_probs=98.1
Q ss_pred cEEEEEeCCCeEEEEEccC---------CeeeEe---eccccCcEEEEEEecC---CCEEEEEeCCCeEEEEeCCC----
Q 023018 78 TLVATGGGDDKGFFWRINQ---------GDWASE---IQGHKDSVSSLAFSMD---GQLLASGGLDGLVQIWDPSS---- 138 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~---------~~~~~~---~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~---- 138 (288)
..|+..+..|.++-..... |.++.. +. ....|.++...++ ..+++.++..|.++-..+..
T Consensus 51 d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~ 129 (323)
T 1wp5_A 51 DVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQ 129 (323)
T ss_dssp SEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCS
T ss_pred CEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhc
Confidence 3444556668776655432 221111 22 2334555433332 56788999999999887632
Q ss_pred ----CceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-------cEEEEeec-cCCCeEEEEEcCCCC-E
Q 023018 139 ----GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-------AYLNMFSG-HGSSVTCGDFTPDGK-T 205 (288)
Q Consensus 139 ----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~-~~~~i~~~~~~p~~~-~ 205 (288)
+.....+... ..+..+........++..+.+|.+..+....- +-+..++. ....|.++...+.+. .
T Consensus 130 ~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ 208 (323)
T 1wp5_A 130 RYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDES 208 (323)
T ss_dssp CCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCE
T ss_pred cccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcE
Confidence 1111123322 45555555555667888888899888876431 11222221 234465654444444 7
Q ss_pred EEEEeCCCeEEEEeCCC-------CceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 206 ICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 206 l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
|++.+..|..+..++.. ++-+..+.........+..+....++..++..+..|.+....+..
T Consensus 209 ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 209 IVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred EEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 88888888877766532 122222221111222444333223334455666777776666643
No 391
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=44.07 E-value=1.6e+02 Score=25.60 Aligned_cols=80 Identities=9% Similarity=0.034 Sum_probs=49.4
Q ss_pred CCeeEeecCCCCEEEEEEcCC-----CCcEEEEEeCCCeEEEEEccCC--------eeeEeecc-----------ccCcE
Q 023018 55 DSTHIFSGHSDEVYSVACSPT-----DATLVATGGGDDKGFFWRINQG--------DWASEIQG-----------HKDSV 110 (288)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~--------~~~~~~~~-----------~~~~i 110 (288)
+|+....+..-..+.|+.... .-..++.|+.+|.|.-.-+... ..+..+.. ...+|
T Consensus 393 ~Pll~~~~~~y~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI 472 (565)
T 3oky_B 393 RPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRI 472 (565)
T ss_dssp SCSEEECSSSSCEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCC
T ss_pred eeEEEEcCCccceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCce
Confidence 344443333335678887642 2357788999999753322211 12222211 14678
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEE
Q 023018 111 SSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 111 ~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
..|.++++...|++++..+.++|-
T Consensus 473 ~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 473 MGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CEEEEEGGGTEEEEECSSCEEEEE
T ss_pred EEEEEcCCCCEEEEEecCeEEEee
Confidence 899999998999999988877764
No 392
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=40.81 E-value=1.8e+02 Score=25.32 Aligned_cols=178 Identities=15% Similarity=0.191 Sum_probs=94.3
Q ss_pred eEEEEEccCCeeeEeec--------cccCcEEEEEEecCCC-EEEEEeCCCe----------------------------
Q 023018 88 KGFFWRINQGDWASEIQ--------GHKDSVSSLAFSMDGQ-LLASGGLDGL---------------------------- 130 (288)
Q Consensus 88 ~i~iw~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~-~l~~~~~dg~---------------------------- 130 (288)
.|.+|++. ++.+..+. .|-..+....|.-+|+ -|++.+.+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 56677775 44444432 1344566666666776 4666655665
Q ss_pred EEEEeCCCCceeEEeccC--CCC---------------EEEEEEcC-CCCEEEEec---CCCeEEEEECCcccEEEEee-
Q 023018 131 VQIWDPSSGNLKCTLEGP--GGG---------------VEWVSWHP-RGHIVLAGS---EDSTVWMWNADRAAYLNMFS- 188 (288)
Q Consensus 131 i~i~d~~~~~~~~~~~~~--~~~---------------i~~~~~~~-~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~- 188 (288)
|.+++-.+++.+..+.-. .+. ..++++.. +...++.+- .-..+..||.+.+++...+.
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 788888888877765421 111 22333321 212333322 12358889987776544332
Q ss_pred -ccC-----------CCeEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCC--CCEEEE
Q 023018 189 -GHG-----------SSVTCGDFTPDGKT-ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD--STLALS 253 (288)
Q Consensus 189 -~~~-----------~~i~~~~~~p~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~ 253 (288)
... ..+....+.-||+- |+.|+ .++| ..|+.+..... .|...+....|.|+ |.-++.
T Consensus 311 d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs-----~~iD-~dG~~L~st~~--gHGDa~hv~dldP~r~GlEv~~ 382 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS-----MAVD-HDGKGMYSTGL--GHGDALHTGDLDPGRPGLEVFQ 382 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT-----EEEC-TTSCEEEECSC--CCCSCEEEECCCTTSSSCEEEE
T ss_pred cCCCCCcccccccCCCCCeeEeCCCCCCceEEEee-----eEEC-CCCCEeeeCCC--CCCCeeEEeecCCCCCCcEEEE
Confidence 111 12223333334332 33322 1333 23444444432 37777777788886 445666
Q ss_pred EeCCC----cEEEEEcCCCcEEEEe
Q 023018 254 GSKDG----SVHMVNITTGKVCCLN 274 (288)
Q Consensus 254 ~~~dg----~i~iwd~~t~~~~~~~ 274 (288)
+.+++ -..+.|..||+++...
T Consensus 383 ~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 383 VHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp ECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred EecCCCCCCccEEEECCCCcEEEEc
Confidence 65542 4556899999998766
No 393
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=38.16 E-value=1.4e+02 Score=26.68 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=41.3
Q ss_pred eEEEEEc----CCCC---EEEEEeCCCeEE-EEeCCCCc-eeEEEcCCCccccCeEEEEEcCCC--CEEEEEeCCCcEEE
Q 023018 194 VTCGDFT----PDGK---TICTGSDDATLR-VWNPKSGE-NIHVIRGHPYHTEGLTCLTISADS--TLALSGSKDGSVHM 262 (288)
Q Consensus 194 i~~~~~~----p~~~---~l~~~~~dg~i~-i~d~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i 262 (288)
.+.|+.. ++++ .++.|+.+|.|. +....... .+..+.... ...+|..|.++++. ..|++++..+.+++
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~-~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQ-DFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCT-TCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccC-CCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4566553 3333 578899999874 33443322 222222221 35678899999987 88888877765554
No 394
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=37.18 E-value=2.3e+02 Score=25.42 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=53.7
Q ss_pred cEEEEEEecCC-CEEEEEeCCCeEEEEeCCCCceeEEeccC-------CCCEEEEEEcC-CCCEEEEecCC-------Ce
Q 023018 109 SVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLEGP-------GGGVEWVSWHP-RGHIVLAGSED-------ST 172 (288)
Q Consensus 109 ~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~~~-~~~~l~~~~~d-------g~ 172 (288)
.|..|+++|.. ..++++...|.|...+ ..++.-..+..+ ...+.+|+++| +...++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 78999999864 3566666556665554 333333333221 23599999998 33344443321 12
Q ss_pred EEEEECCc-c---cEEEE-eecc-----CCCeEEEEEcC-CCCEEEEEeCC
Q 023018 173 VWMWNADR-A---AYLNM-FSGH-----GSSVTCGDFTP-DGKTICTGSDD 212 (288)
Q Consensus 173 i~i~d~~~-~---~~~~~-~~~~-----~~~i~~~~~~p-~~~~l~~~~~d 212 (288)
..||-... + +.+.. +... ...+..|+++| +...|+++...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 44554332 2 22221 1100 01246788998 45677777643
No 395
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.61 E-value=1.4e+02 Score=26.16 Aligned_cols=69 Identities=10% Similarity=-0.024 Sum_probs=44.2
Q ss_pred CEEEEEEcC----CCC--cEEEEEeCCCeEEEEEccCCe------eeEeec--cccCcEEEEEEecCCCEEEEEeCCCeE
Q 023018 66 EVYSVACSP----TDA--TLVATGGGDDKGFFWRINQGD------WASEIQ--GHKDSVSSLAFSMDGQLLASGGLDGLV 131 (288)
Q Consensus 66 ~v~~~~~~~----~~~--~~l~~~~~dg~i~iw~~~~~~------~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i 131 (288)
..+.++... .+. ..++.|+.+|.|.-.-+.... .+..+. ....+|..|.++++...|++++..+.+
T Consensus 363 ~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~ 442 (590)
T 3nvq_A 363 HYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVS 442 (590)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEE
T ss_pred cEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEE
Confidence 466666442 122 577889999987644332211 122232 245688999999998899999888777
Q ss_pred EEE
Q 023018 132 QIW 134 (288)
Q Consensus 132 ~i~ 134 (288)
+|-
T Consensus 443 qVP 445 (590)
T 3nvq_A 443 QVP 445 (590)
T ss_dssp EEE
T ss_pred Ecc
Confidence 664
No 396
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=35.07 E-value=2.3e+02 Score=24.71 Aligned_cols=149 Identities=19% Similarity=0.210 Sum_probs=83.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEecc-------------------C-----CCC-EEEEEEcCCCCEEEEecC---CC
Q 023018 120 QLLASGGLDGLVQIWDPSSGNLKCTLEG-------------------P-----GGG-VEWVSWHPRGHIVLAGSE---DS 171 (288)
Q Consensus 120 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------------~-----~~~-i~~~~~~~~~~~l~~~~~---dg 171 (288)
..+++|+.||.++.++.. ++.+..+-. | ..+ +..+.+...-+.++.++. ..
T Consensus 86 ~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG~ 164 (570)
T 3hx6_A 86 PRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGK 164 (570)
T ss_dssp CEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSCS
T ss_pred cEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCCc
Confidence 588999999999999976 554332210 1 111 222333221233444432 24
Q ss_pred eEEEEECCc---ccEEEEeecc-------CCCeEEEEEcCCCCEEE-EEeC------CCeEEEEeCCCCceeEEEcCCC-
Q 023018 172 TVWMWNADR---AAYLNMFSGH-------GSSVTCGDFTPDGKTIC-TGSD------DATLRVWNPKSGENIHVIRGHP- 233 (288)
Q Consensus 172 ~i~i~d~~~---~~~~~~~~~~-------~~~i~~~~~~p~~~~l~-~~~~------dg~i~i~d~~~~~~~~~~~~~~- 233 (288)
.++..|+.. .+.+..+... .-.--.|.-.++++.++ .|+. ...|+|+|+.+|..+..+....
T Consensus 165 ~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~~~~ 244 (570)
T 3hx6_A 165 GLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTGR 244 (570)
T ss_dssp EEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEECCS
T ss_pred EEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEecCCC
Confidence 578888765 3455555411 11111223334566543 3332 3479999999999988775321
Q ss_pred -ccccCeEEEE-EcCC--C--CEEEEEeCCCcEEEEEcCCCc
Q 023018 234 -YHTEGLTCLT-ISAD--S--TLALSGSKDGSVHMVNITTGK 269 (288)
Q Consensus 234 -~~~~~v~~~~-~~~~--~--~~l~~~~~dg~i~iwd~~t~~ 269 (288)
.....+..+. +..+ + .++++|...|.|.-+|+....
T Consensus 245 ~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 245 TGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGK 286 (570)
T ss_dssp TTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSS
T ss_pred CccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCC
Confidence 0112333333 2233 3 578999999999999998754
No 397
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=32.80 E-value=1.9e+02 Score=25.25 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=35.6
Q ss_pred EEEEEeCCCeEEE-EeCCCC----c-eeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 023018 205 TICTGSDDATLRV-WNPKSG----E-NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (288)
Q Consensus 205 ~l~~~~~dg~i~i-~d~~~~----~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 262 (288)
.++.|+.+|.|.- .....+ . .+..+.... ...+|..+.++++...|++++..+.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~-~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFR-RAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCS-SCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccC-CCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 5678889998753 333222 1 122232211 3567899999998889998877765554
No 398
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=31.87 E-value=1.8e+02 Score=22.70 Aligned_cols=187 Identities=10% Similarity=0.037 Sum_probs=99.6
Q ss_pred cEEEEEeCCCeEEEEEccC---------CeeeE---eeccccCcEEEEEEe---cCCCEEEEEeCCCeEEEEeCCCC---
Q 023018 78 TLVATGGGDDKGFFWRINQ---------GDWAS---EIQGHKDSVSSLAFS---MDGQLLASGGLDGLVQIWDPSSG--- 139 (288)
Q Consensus 78 ~~l~~~~~dg~i~iw~~~~---------~~~~~---~~~~~~~~i~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~--- 139 (288)
..|+..+..|.++-..... |.++. .+. ....|.++... .+..+++..+..|.++-..+...
T Consensus 54 ~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~ 132 (307)
T 1zi0_A 54 DHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRL 132 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTC
T ss_pred CEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcc
Confidence 3444556668766655432 22211 122 23456555432 34567888999999998865421
Q ss_pred ----ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECCccc-------EEEEee-ccCCCeEEEEEcCCCCEEE
Q 023018 140 ----NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA-------YLNMFS-GHGSSVTCGDFTPDGKTIC 207 (288)
Q Consensus 140 ----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~-~~~~~i~~~~~~p~~~~l~ 207 (288)
.....+... ..+..+........++..+..|.+..+....-. -+..+. .....|..+...+++..|+
T Consensus 133 ~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll 211 (307)
T 1zi0_A 133 RTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAIL 211 (307)
T ss_dssp CTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEE
T ss_pred ccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEE
Confidence 111123333 455555555555677788888998888764311 111111 1234566665555566788
Q ss_pred EEeCCCeEEEEeCCCC-------ceeEEEcCCCccccCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 208 TGSDDATLRVWNPKSG-------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 208 ~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
+.+..|.++-.++... .-+..+.. ......+..+....+..-|+..+.+|.+.-+.+..
T Consensus 212 ~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~-~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 212 TATQNGYGKRTAVAEYPTKSRATKGVISIKV-TERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EEETTSEEEEECGGGSCCCCTTSCCEESSCC-CTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEEcCCceEEEEHHHhccCCCCCCCEEeeEe-cCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 8899998888766321 11111111 11224454444433344455666777776666543
No 399
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=28.11 E-value=2.6e+02 Score=24.34 Aligned_cols=70 Identities=7% Similarity=0.004 Sum_probs=42.3
Q ss_pred CeEEEEEcC----CC--CEEEEEeCCCeEE-EEeCCC--C-----ceeEEEcCCCc--------cccCeEEEEEcCCCCE
Q 023018 193 SVTCGDFTP----DG--KTICTGSDDATLR-VWNPKS--G-----ENIHVIRGHPY--------HTEGLTCLTISADSTL 250 (288)
Q Consensus 193 ~i~~~~~~p----~~--~~l~~~~~dg~i~-i~d~~~--~-----~~~~~~~~~~~--------~~~~v~~~~~~~~~~~ 250 (288)
..+.|+... ++ ..++.|+.+|.|. +..... + ..+..+...+. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 457777764 23 3478899999874 443221 1 12222322210 1457889999998889
Q ss_pred EEEEeCCCcEEE
Q 023018 251 ALSGSKDGSVHM 262 (288)
Q Consensus 251 l~~~~~dg~i~i 262 (288)
|++++..+.+++
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999887766665
No 400
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=27.83 E-value=2.4e+02 Score=22.75 Aligned_cols=192 Identities=14% Similarity=0.153 Sum_probs=101.2
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----------e-eeEeecc-ccCcEEEEEEecCCCEEEEEeCCCeEEE
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQG----------D-WASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----------~-~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i 133 (288)
.+..++.+. +....+.-..+|.|+.|-.... . ....+.. ....|..++.. ....++...+|.|+.
T Consensus 106 ~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~ 182 (389)
T 3kci_A 106 FIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYT 182 (389)
T ss_dssp CEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEE
T ss_pred ceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEE
Confidence 455566665 5556666678899999965321 0 1111111 12256555543 335555567899999
Q ss_pred EeCCCC-c----------eeEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-c----------EEEEeec-
Q 023018 134 WDPSSG-N----------LKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-A----------YLNMFSG- 189 (288)
Q Consensus 134 ~d~~~~-~----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~~- 189 (288)
|=.... + ....+.. ....|..++......+.++-..+|.|+.|-.... + ....+..
T Consensus 183 wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 262 (389)
T 3kci_A 183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 262 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG
T ss_pred eCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc
Confidence 954321 0 0111111 2235666766543356666778899999964321 1 1111111
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---------ce--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCCC
Q 023018 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG---------EN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (288)
Q Consensus 190 ~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~---------~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 258 (288)
....|..++.- ..+.++-..+|.|+.|=.... .. ...+.. .....|..++... ...++...+|
T Consensus 263 ~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~--l~~~~v~~ia~G~--~h~~al~~~G 336 (389)
T 3kci_A 263 TGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGS--LHCVCCTEDG 336 (389)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG--GTTCCEEEEEECS--SEEEEEETTC
T ss_pred CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEecc--CCCCCEEEEEecc--CeEEEECCCC
Confidence 22246666554 345555578899999964321 01 111111 1223466665543 3445557889
Q ss_pred cEEEEEcC
Q 023018 259 SVHMVNIT 266 (288)
Q Consensus 259 ~i~iwd~~ 266 (288)
.|+.|=..
T Consensus 337 ~v~~wG~n 344 (389)
T 3kci_A 337 EVYTWGDN 344 (389)
T ss_dssp CEEEEECC
T ss_pred CEEEeeCC
Confidence 99999764
No 401
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=24.98 E-value=3.3e+02 Score=23.42 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=41.6
Q ss_pred CeEEEEEcC-CC-CEEEEEeCCCeEEEEeCC-CC--ceeEEEcCCCccccCe-EEEEEcCCCCEEEEEeCCCcEEE
Q 023018 193 SVTCGDFTP-DG-KTICTGSDDATLRVWNPK-SG--ENIHVIRGHPYHTEGL-TCLTISADSTLALSGSKDGSVHM 262 (288)
Q Consensus 193 ~i~~~~~~p-~~-~~l~~~~~dg~i~i~d~~-~~--~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i 262 (288)
..+.|+... ++ ..++.|+.+|.|.-.-+. .+ ..+..+... ...+| ..+.++++...|++++..+.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~--~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQ--QGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESS--TTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccC--CCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 355665554 22 346778899987644332 21 223333321 34567 48899998899999887776665
No 402
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=24.48 E-value=3.1e+02 Score=22.97 Aligned_cols=151 Identities=11% Similarity=0.205 Sum_probs=73.0
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe-----eeEeec------cccCcEEEEEEecCC-------C-EEEEEe
Q 023018 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----WASEIQ------GHKDSVSSLAFSMDG-------Q-LLASGG 126 (288)
Q Consensus 66 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~------~~~~~i~~~~~~~~~-------~-~l~~~~ 126 (288)
.+++ .++ ..+..++... ..+.||.+.... .-..+. .|.....++.+.+.. . -++..+
T Consensus 40 ~~sg-~i~-~~GyAlvv~~--~~l~VW~y~~~~~~~~~~c~~lpLp~sd~~~~~~lvsi~~~~~~~~~~s~~~pGlliVs 115 (450)
T 1xks_A 40 QLTI-NID-EGGWACLVCK--EKLIIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSSPSGEAHSTQAVAVMVAT 115 (450)
T ss_dssp CEEE-EEC-TTSEEEEEET--TEEEEEECCSSCCGGGCCEEEEECCCCSSCCCGGGEEEEECC-------CTTEEEEEEC
T ss_pred ceEE-EEC-CCcEEEEEeC--CeEEEEeecCCCCCCcccceeccCCccccccCCcEEEEEcCCCccccccCCCceEEEEc
Confidence 4444 355 3665555444 689999987651 111111 122223344333321 1 244444
Q ss_pred CCCeEEEEeCCCC--ceeEE-eccCC-CCEEEEEEcCCCCEEEEecCCCeEEEEECCcccEE---EEeeccC--------
Q 023018 127 LDGLVQIWDPSSG--NLKCT-LEGPG-GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL---NMFSGHG-------- 191 (288)
Q Consensus 127 ~dg~i~i~d~~~~--~~~~~-~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~-------- 191 (288)
..|.|+.|.--.. +.+.. +.-.. ..+..+.-.. +.-++.++..|++....++ |++- +.++...
T Consensus 116 ptG~VryWesIs~~~~~~ei~~~L~~~E~vt~l~n~e-paGfIlaTStgrl~~lsir-Gkp~l~~~~l~~~~G~l~gi~~ 193 (450)
T 1xks_A 116 REGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQ-GGSFILSSSGSQLIRLIPE-SSGKIHQHILPQGQGMLSGIGR 193 (450)
T ss_dssp TTCEEEEESCTTCTTCCEEEECC----CCEEEEEEET-TTEEEEEETTCCEEEEEEC-TTSCEEEEECTTCCCC------
T ss_pred CCccEEEccccCCCCceEEEEecCCCCceEEEEeecC-CceEEEEeccceEEEEEec-CCceEEEEEecCCCcccccccc
Confidence 4999999975332 22211 11122 3355543332 3344455555887777776 4321 1111110
Q ss_pred ------------C--CeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q 023018 192 ------------S--SVTCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (288)
Q Consensus 192 ------------~--~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~ 223 (288)
. ...++.+...++.+++.+. +.+.+|++..+
T Consensus 194 ~~sSl~G~~s~~~~ia~v~~~~~~g~r~v~ilT~-~~lq~W~l~~~ 238 (450)
T 1xks_A 194 KVSSLFGILSPSSDLTLSSVLWDRERSSFYSLTS-SNISKWELDDS 238 (450)
T ss_dssp ------------CCCCEEEEEEETTTTEEEEEES-SEEEEEEECSS
T ss_pred cccccccccCCCcceEEEEeccCCCcEEEEEEcC-CceEEEEecCC
Confidence 0 1123445556677777775 45999999555
No 403
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=23.92 E-value=3.2e+02 Score=24.30 Aligned_cols=66 Identities=8% Similarity=0.139 Sum_probs=42.1
Q ss_pred EEEEEEc----CCC---CEEEEecCCCeEE-EEECCccc-EEEEee--ccCCCeEEEEEcCCC--CEEEEEeCCCeEEE
Q 023018 152 VEWVSWH----PRG---HIVLAGSEDSTVW-MWNADRAA-YLNMFS--GHGSSVTCGDFTPDG--KTICTGSDDATLRV 217 (288)
Q Consensus 152 i~~~~~~----~~~---~~l~~~~~dg~i~-i~d~~~~~-~~~~~~--~~~~~i~~~~~~p~~--~~l~~~~~dg~i~i 217 (288)
.++|+.. .++ ..++.|+.+|.|. +....... .+..+. ....+|..|.+++.. .+|++++..+.++|
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 5666653 233 3688889999874 33443322 222222 235688899999987 89999988776655
No 404
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=22.89 E-value=3e+02 Score=22.25 Aligned_cols=113 Identities=14% Similarity=0.092 Sum_probs=62.5
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCeEEEEEccC---------CeeeEe---eccccCcEEEEEEec---CCCEEEEEeCC
Q 023018 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQ---------GDWASE---IQGHKDSVSSLAFSM---DGQLLASGGLD 128 (288)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~---~~~~~~~i~~~~~~~---~~~~l~~~~~d 128 (288)
.+.+..+.... ....|+..+..|.++-+.... |.++.. +. ....|.++.... ...+|+.++..
T Consensus 45 ~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~ 122 (370)
T 3l6v_A 45 EDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRN 122 (370)
T ss_dssp CCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETT
T ss_pred CCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCC
Confidence 34455444444 334444556668776655432 222211 22 234555554432 35589999999
Q ss_pred CeEEEEeCCCC-------ceeEEeccCCCCEEEEEEcCCCCEEEEecCCCeEEEEECC
Q 023018 129 GLVQIWDPSSG-------NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (288)
Q Consensus 129 g~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 179 (288)
|.++...+... .....+.. ...+..+........++..+..|.+..+...
T Consensus 123 G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 123 GTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp SEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred CeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 99998775322 11122332 3445555555555677788888988888753
No 405
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=22.74 E-value=2.3e+02 Score=24.39 Aligned_cols=70 Identities=14% Similarity=0.029 Sum_probs=45.6
Q ss_pred CCEEEEEEcCC-CCcEEEEEeCCCeEEEEEcc-CC--eeeEeec-cccCcE-EEEEEecCCCEEEEEeCCCeEEEE
Q 023018 65 DEVYSVACSPT-DATLVATGGGDDKGFFWRIN-QG--DWASEIQ-GHKDSV-SSLAFSMDGQLLASGGLDGLVQIW 134 (288)
Q Consensus 65 ~~v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~-~~--~~~~~~~-~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~ 134 (288)
...++|+.... +...++.|+.+|.|.-.-+. .. ..+..+. ....+| ..|.++++..+|++++..+.++|-
T Consensus 387 ~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 387 IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 34777776642 34567789999998754443 21 1222222 245577 489999988899999888877763
No 406
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.59 E-value=3.1e+02 Score=22.25 Aligned_cols=190 Identities=14% Similarity=0.162 Sum_probs=95.3
Q ss_pred CCEEEEEEcCCCCcEEEEEeCCCeEEEEEccCC-e---------ee-Eeecc-ccCcEEEEEEecCCCEEEEEeCCCeEE
Q 023018 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQG-D---------WA-SEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (288)
Q Consensus 65 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~---------~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~ 132 (288)
..|..++... ...+|....++.|+.|-.... + .. ..+.. ....|..++.. ....+.-..+|.|+
T Consensus 68 ~~i~~va~G~--~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~ 143 (406)
T 4d9s_A 68 HQIVSVTCGA--DHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQ 143 (406)
T ss_dssp SCEEEEEECS--SEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEE
T ss_pred CCEEEEEeCc--ceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEE
Confidence 3678887753 223333333359999964321 0 00 11111 22356666653 33555557889999
Q ss_pred EEeCCCCce-----------eEEecc-CCCCEEEEEEcCCCCEEEEecCCCeEEEEECCcc-c----------EEEEee-
Q 023018 133 IWDPSSGNL-----------KCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-A----------YLNMFS- 188 (288)
Q Consensus 133 i~d~~~~~~-----------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~----------~~~~~~- 188 (288)
.|-...... ...+.. ....|..++.. ..+.++-..+|.|+.|-.... + ....+.
T Consensus 144 ~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~ 221 (406)
T 4d9s_A 144 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTS 221 (406)
T ss_dssp EEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCC
T ss_pred EeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecc
Confidence 996432210 111111 12246666653 345666678899999964321 0 011111
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-c--------e--eEEEcCCCccccCeEEEEEcCCCCEEEEEeCC
Q 023018 189 GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG-E--------N--IHVIRGHPYHTEGLTCLTISADSTLALSGSKD 257 (288)
Q Consensus 189 ~~~~~i~~~~~~p~~~~l~~~~~dg~i~i~d~~~~-~--------~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 257 (288)
.....|..++.. ..+.+.-..+|.|+.|-.... + . ...+.. .....|..++... ...++-..+
T Consensus 222 ~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~--~~~~~v~~i~~G~--~hs~alt~~ 295 (406)
T 4d9s_A 222 TGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA--LSNSFISQISGGW--RHTMALTSD 295 (406)
T ss_dssp STTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGG--GTTSCEEEEEECS--SEEEEEETT
T ss_pred cCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecc--cCCCCEEEEEecC--CEEEEEcCC
Confidence 122356665553 345555678899999964321 1 1 111111 1223465555432 344445678
Q ss_pred CcEEEEEcC
Q 023018 258 GSVHMVNIT 266 (288)
Q Consensus 258 g~i~iwd~~ 266 (288)
|.|+.|=..
T Consensus 296 G~v~~wG~n 304 (406)
T 4d9s_A 296 GKLYGWGWN 304 (406)
T ss_dssp SCEEEEECC
T ss_pred CeEEEeeCC
Confidence 888888543
No 407
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=21.51 E-value=1.8e+02 Score=18.96 Aligned_cols=24 Identities=17% Similarity=0.266 Sum_probs=13.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 023018 239 LTCLTISADSTLALSGSKDGSVHMVNITT 267 (288)
Q Consensus 239 v~~~~~~~~~~~l~~~~~dg~i~iwd~~t 267 (288)
...+.+.++|.+++.. . .+|...+
T Consensus 94 ~~~l~l~~~Gnlvl~~---~--~~W~Sg~ 117 (119)
T 1b2p_A 94 HYVLVLQPDRNVVIYG---D--ALWATQT 117 (119)
T ss_dssp CEEEEECTTSCEEEEE---S--EEEECCC
T ss_pred CEEEEEECCCcEEEEC---c--cEeCCCC
Confidence 3456677777755543 1 5666543
No 408
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=20.94 E-value=4.6e+02 Score=23.60 Aligned_cols=151 Identities=13% Similarity=0.035 Sum_probs=73.3
Q ss_pred ccCcEEEEEEecCC-CEEEEEeCCCeEEEEeCCCCceeEEecc------------CCCCEEEEEEcC-CCCEEEEecCC-
Q 023018 106 HKDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLEG------------PGGGVEWVSWHP-RGHIVLAGSED- 170 (288)
Q Consensus 106 ~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------~~~~i~~~~~~~-~~~~l~~~~~d- 170 (288)
-.+.|.+|.++|.. ..++++...|-|.... ..++.-..+.. ....+.+++++| +...++++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 45689999999976 4566666556554433 33333222221 123589999998 33444443321
Q ss_pred ----CeEEEEECC-cc---cEEEEeecc----CCC--eEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCc-
Q 023018 171 ----STVWMWNAD-RA---AYLNMFSGH----GSS--VTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPY- 234 (288)
Q Consensus 171 ----g~i~i~d~~-~~---~~~~~~~~~----~~~--i~~~~~~p~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 234 (288)
....||-.. .+ +.+..-... ... ...++++|. ...++++...+.|. .....|+....+.....
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSRMNQLPDS 176 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEECTTSCCC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccccccCccc
Confidence 123344322 22 222210000 111 135788874 45566666554433 22233444444432110
Q ss_pred --cccCeEEEEEcCC-CCEEEEEeCCC
Q 023018 235 --HTEGLTCLTISAD-STLALSGSKDG 258 (288)
Q Consensus 235 --~~~~v~~~~~~~~-~~~l~~~~~dg 258 (288)
....+..+.++|. ...++++..++
T Consensus 177 ~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 177 STYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1234778889884 34455555554
No 409
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=20.68 E-value=2.6e+02 Score=20.57 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=54.9
Q ss_pred CeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCceeEEEcCCCccccCeEEEEEcCC--
Q 023018 171 STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT-GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD-- 247 (288)
Q Consensus 171 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 247 (288)
..+.+|.+..+.-+..+....+ ..|-.....-+. .-.+|.|++-+..++.++..... .+........
T Consensus 69 ~~lt~Wa~~~~nw~wgY~~~ds----~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~n------Gvv~~~C~~s~~ 138 (206)
T 1sr4_A 69 ALLTVWALAKRNWLWAYPNIYS----QDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGN------GLIHDICSLDKL 138 (206)
T ss_dssp EEEEECSCSTTCBEEEEEGGGC----GGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEETT------EEEEECCCTTCG
T ss_pred CEEEEEecCCCcceeeeccccc----CCcCCcceeEEEeecCCCEEEEEECCCCceeeeccC------CeEEecCCCCCc
Confidence 4578888877665555543221 111111122222 45688899999998888877542 2322222221
Q ss_pred -CCEEEEEeCCCcEEEEEcCCCcEEEEe
Q 023018 248 -STLALSGSKDGSVHMVNITTGKVCCLN 274 (288)
Q Consensus 248 -~~~l~~~~~dg~i~iwd~~t~~~~~~~ 274 (288)
..+=+.-...|.|.|=++.+++|+...
T Consensus 139 ~Q~wsiiPttnGAVQIKnvatg~CL~t~ 166 (206)
T 1sr4_A 139 AQEFELLPTDSGAVVIKSVSQGRCVTYN 166 (206)
T ss_dssp GGCEEEEEBTTSCEEEEETTTCCEEEEC
T ss_pred ccEEEEecCCCccEEEEECCCCccCCcc
Confidence 123334456788899999999999974
No 410
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=20.37 E-value=1.7e+02 Score=18.45 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=21.5
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEECCcccEEEEeeccCCCeEEEEEcCCCCEEEE
Q 023018 154 WVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (288)
Q Consensus 154 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~ 208 (288)
.+.+..+|++++.-.. +. .+|...+. .......+.+.++|++++.
T Consensus 54 ~L~l~~dGnLvL~d~~-~~-~vWss~t~--------~~~~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSS-GR-SLWASHST--------RGSGNYILILQDDGNVIIY 98 (105)
T ss_dssp EEEECTTSCEEEECTT-CC-EEEECCCC--------CCSSCEEEEECTTSCEEEE
T ss_pred EEEEeCCccEEEECCC-cE-EEEEecCC--------CCCCCEEEEEeCCCeEEEE
Confidence 4666667766555332 22 34544321 1112234455666666554
Done!